HHsearch alignment for GI: 254780567 and conserved domain: PRK07994

>PRK07994 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.01  E-value=3.8e-08  Score=70.03  Aligned_cols=189  Identities=13%  Similarity=0.160  Sum_probs=118.4

Q ss_pred             CCCCEEECCCHHHHHHHHHH-HHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCH----------HHHHHH-------
Q ss_conf             84541653618999999985-10167-884999878777868899999986276201----------356764-------
Q gi|254780567|r   39 SRDDLLVHSAIEQAVRLIDS-WPSWP-SRVVILVGPSGSGKSCLANIWSDKSRSTRF----------SNIAKS-------   99 (246)
Q Consensus        39 ~~dnFiv~~~N~~A~~~i~~-~~~~~-~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~----------~~~~~~-------   99 (246)
T Consensus        14 ~f~~~-vGQ--~~v~~~l~na~~~~r~~haylf~G~rG~GKtt~ari~ak~lnc~~~~~~~pcg~c~~c~~i~~g~~~d~   90 (643)
T PRK07994         14 TFADV-VGQ--EHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAKGLNCETGITATPCGVCDNCREIEQGRFVDL   90 (643)
T ss_pred             CHHHH-CCC--HHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf             66665-387--999999999998298663487458998888899999999967999999997876776898865898875


Q ss_pred             --------H----HHH---------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHH
Q ss_conf             --------4----454---------66666653343321003761033545554311234-2156403543200223456
Q gi|254780567|r  100 --------L----DSI---------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPD  157 (246)
Q Consensus       100 --------~----~~~---------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~D  157 (246)
T Consensus        91 ~eidaas~~~vd~~rel~~~~~y~p~~~r~kvyiidEvhmls~--~afnalLKtlEePp~hv~filaTT~~~k~p---~T  165 (643)
T PRK07994         91 IEIDAASRTKVEDTRDLLDNVQYAPARGRFKVYLIDEVHMLSR--HSFNALLKTLEEPPAHVKFLLATTDPQKLP---VT  165 (643)
T ss_pred             EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCH--HHHHHHHHHHCCCCHHCEEEEECCCHHHCC---HH
T ss_conf             8863677788899999998446688778536999722101589--999999986237861008998607745484---78


Q ss_pred             HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf             67885212224507889789999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r  158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE  237 (246)
Q Consensus       158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~  237 (246)
T Consensus       166 ilSRC---~~f~~~~~~~~~i~~~l~~i~~~e~i~~~~~al~~ia~~a~gs~rdalsl~dq~--i~~-~~~~~~~~~v~~  239 (643)
T PRK07994        166 ILSRC---LQFHLKALDVEQIRHQLEHILNEEHIAHEPRALQLLARAADGSLRDALSLTDQA--IAS-GDGQVSTQAVSA  239 (643)
T ss_pred             HHHHH---HHEECCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH--HHH-CCCCCCHHHHHH
T ss_conf             99777---650016699999999999999975998788999999997478656688899999--986-589747999999


Q ss_pred             HHHH
Q ss_conf             9986
Q gi|254780567|r  238 VLKE  241 (246)
Q Consensus       238 vL~~  241 (246)
T Consensus       240 mlg~  243 (643)
T PRK07994        240 MLGT  243 (643)
T ss_pred             HHCC
T ss_conf             8589