HHsearch alignment for GI: 254780567 and conserved domain: PRK08116
>PRK08116 hypothetical protein; Validated.
Probab=99.63 E-value=9.2e-16 Score=116.89 Aligned_cols=147 Identities=16% Similarity=0.154 Sum_probs=99.9
Q ss_pred CCCCCCEEECCCHHHHHHH----HHHHHCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHHHHHH--H---
Q ss_conf 6884541653618999999----9851016--78849998787778688999999862762-----01356764--4---
Q gi|254780567|r 37 GISRDDLLVHSAIEQAVRL----IDSWPSW--PSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSNIAKS--L--- 100 (246)
Q Consensus 37 ~~~~dnFiv~~~N~~A~~~----i~~~~~~--~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~~~~~--~--- 100 (246)
T Consensus 75 ~~tFeN~~~~~~~~~a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~~ll~~lk~~ 154 (262)
T PRK08116 75 NSTFENWLFRKGSEKAYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVPELLNRIKST 154 (262)
T ss_pred HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
T ss_conf 19222556895259999999999998987364686189989899989999999999999879939998899999999999
Q ss_pred -----------HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH-HHHHHHHHHHH-
Q ss_conf -----------454666666533433210037---61033545554311234215640354320022-34566788521-
Q gi|254780567|r 101 -----------DSILIDTRKPVLLEDIDLLDF---NDTQLFHIINSIHQYDSSLLMTARTFPVSWGV-CLPDLCSRLKA- 164 (246)
Q Consensus 101 -----------~~~~~~~~~~i~iddi~~~~~---~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~-~l~DL~SRl~~- 164 (246)
T Consensus 155 ~~~~~~~~~~e~l~~l~~~dLLIiDDlG~e~~t~w~~e~lf~IIn~Ry~~~kptIiTTNl~~~eL~~~~~~Ri~sRl~e~ 234 (262)
T PRK08116 155 YNSEGKEDENEIIRALDNADLLILDDLGAEKDTEWVREKLYNIIDSRYRKGLPTIFTTNLSLEELKNQYGKRTYSRILEM 234 (262)
T ss_pred HHCCCCHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf 86356101999999861299899832214569878999999999999976999899879999999998637999999867
Q ss_pred CCEEEECCCCHHHHHHHHHHH
Q ss_conf 222450788978999999998
Q gi|254780567|r 165 ATVVKISLPDDDFLEKVIVKM 185 (246)
Q Consensus 165 g~~~~I~~pdde~~~~il~k~ 185 (246)
T Consensus 235 ~~~v~~~G~--d~R~~~a~~k 253 (262)
T PRK08116 235 CTPVKNEGK--SYRREIAKEK 253 (262)
T ss_pred CEEEEEECC--CHHHHHHHHH
T ss_conf 789985177--8879999999