HHsearch alignment for GI: 254780567 and conserved domain: PRK08116

>PRK08116 hypothetical protein; Validated.
Probab=99.63  E-value=9.2e-16  Score=116.89  Aligned_cols=147  Identities=16%  Similarity=0.154  Sum_probs=99.9

Q ss_pred             CCCCCCEEECCCHHHHHHH----HHHHHCC--CCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHHHHHH--H---
Q ss_conf             6884541653618999999----9851016--78849998787778688999999862762-----01356764--4---
Q gi|254780567|r   37 GISRDDLLVHSAIEQAVRL----IDSWPSW--PSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSNIAKS--L---  100 (246)
Q Consensus        37 ~~~~dnFiv~~~N~~A~~~----i~~~~~~--~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~~~~~--~---  100 (246)
T Consensus        75 ~~tFeN~~~~~~~~~a~~~a~~Y~~~f~~~~~~~~GLll~G~~GtGKThLa~aIa~~l~~~g~~V~~~~~~~ll~~lk~~  154 (262)
T PRK08116         75 NSTFENWLFRKGSEKAYKVAVKYVKKFEEMKKESVGLLLWGSPGNGKTYLAAAIANELIEKGVPVVFVNVPELLNRIKST  154 (262)
T ss_pred             HCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHH
T ss_conf             19222556895259999999999998987364686189989899989999999999999879939998899999999999


Q ss_pred             -----------HHHHHHHHHHHHHHHHHCCCC---CCHHHHHHHHHHHCCCCCEEEEECCCCCCHHH-HHHHHHHHHHH-
Q ss_conf             -----------454666666533433210037---61033545554311234215640354320022-34566788521-
Q gi|254780567|r  101 -----------DSILIDTRKPVLLEDIDLLDF---NDTQLFHIINSIHQYDSSLLMTARTFPVSWGV-CLPDLCSRLKA-  164 (246)
Q Consensus       101 -----------~~~~~~~~~~i~iddi~~~~~---~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~-~l~DL~SRl~~-  164 (246)
T Consensus       155 ~~~~~~~~~~e~l~~l~~~dLLIiDDlG~e~~t~w~~e~lf~IIn~Ry~~~kptIiTTNl~~~eL~~~~~~Ri~sRl~e~  234 (262)
T PRK08116        155 YNSEGKEDENEIIRALDNADLLILDDLGAEKDTEWVREKLYNIIDSRYRKGLPTIFTTNLSLEELKNQYGKRTYSRILEM  234 (262)
T ss_pred             HHCCCCHHHHHHHHHHHCCCEEEEEHHCCCCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHC
T ss_conf             86356101999999861299899832214569878999999999999976999899879999999998637999999867


Q ss_pred             CCEEEECCCCHHHHHHHHHHH
Q ss_conf             222450788978999999998
Q gi|254780567|r  165 ATVVKISLPDDDFLEKVIVKM  185 (246)
Q Consensus       165 g~~~~I~~pdde~~~~il~k~  185 (246)
T Consensus       235 ~~~v~~~G~--d~R~~~a~~k  253 (262)
T PRK08116        235 CTPVKNEGK--SYRREIAKEK  253 (262)
T ss_pred             CEEEEEECC--CHHHHHHHHH
T ss_conf             789985177--8879999999