HHsearch alignment for GI: 254780567 and conserved domain: PRK08691
>PRK08691 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.08 E-value=1.3e-08 Score=72.89 Aligned_cols=190 Identities=13% Similarity=0.127 Sum_probs=118.3
Q ss_pred CCCCEEECCCHHHHHHHHHH-HHCCC-CCEEEEECCCCCCHHHHHHHHHHHHCCCCH----------HHHHHH-------
Q ss_conf 84541653618999999985-10167-884999878777868899999986276201----------356764-------
Q gi|254780567|r 39 SRDDLLVHSAIEQAVRLIDS-WPSWP-SRVVILVGPSGSGKSCLANIWSDKSRSTRF----------SNIAKS------- 99 (246)
Q Consensus 39 ~~dnFiv~~~N~~A~~~i~~-~~~~~-~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~----------~~~~~~------- 99 (246)
T Consensus 14 ~F~e-~vGQ-~-~v~~~L~nal~~~rl~haylf~G~rGvGKTt~Ari~Ak~lNC~~~~~~~pCg~C~~C~~i~~g~~~D~ 90 (704)
T PRK08691 14 TFAD-LVGQ-E-HVVKALQNALDEGRLHHAYLLTGTRGVGKTTIARILAKSLNCENAQHGEPCGVCQSCTQIDAGRYVDL 90 (704)
T ss_pred CHHH-HCCC-H-HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCCCE
T ss_conf 4756-4186-9-99999999998199752375027898788899999999967999999997877776787855899874
Q ss_pred --------HHHH-------------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCC-CEEEEECCCCCCHHHHHHH
Q ss_conf --------4454-------------66666653343321003761033545554311234-2156403543200223456
Q gi|254780567|r 100 --------LDSI-------------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDS-SLLMTARTFPVSWGVCLPD 157 (246)
Q Consensus 100 --------~~~~-------------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~-~iilts~~~p~~~~~~l~D 157 (246)
T Consensus 91 ~EiDaAs~~~vdd~R~l~~~~~y~P~~~~yKVyiiDEvhmLs~--~afNAlLKtLEEPP~~v~FilaTTdp~Klp---~T 165 (704)
T PRK08691 91 LEIDAASNTGIDNIREVLENAQYAPTAGKYKVYIIDEVHMLSK--SAFNAMLKTLEEPPEHVKFILATTDPHKVP---VT 165 (704)
T ss_pred EEEECCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCH--HHHHHHHHHHCCCCCCEEEEEECCCHHHCC---HH
T ss_conf 7742454458899999998534688678535999831544389--999999986147975608998548846475---89
Q ss_pred HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 67885212224507889789999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r 158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE 237 (246)
Q Consensus 158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~ 237 (246)
T Consensus 166 IlSRC---~~f~l~~~~~~~i~~~L~~i~~~E~i~~e~~al~~ia~~a~Gs~RDalslldQ---aia~~~g~~~~~~v~~ 239 (704)
T PRK08691 166 VLSRC---LQFVLRNMTAQQVADHLAHVLDSEKIAYEPPALQLLGRAAAGSMRDALSLLDQ---AIALGSGKVAENDVRQ 239 (704)
T ss_pred HHHHH---HHHCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHH---HHHHCCCCCCHHHHHH
T ss_conf 99888---77102689999999999999998398568999999999757857779889999---9996489626999999
Q ss_pred HHHHH
Q ss_conf 99867
Q gi|254780567|r 238 VLKET 242 (246)
Q Consensus 238 vL~~~ 242 (246)
T Consensus 240 mLG~~ 244 (704)
T PRK08691 240 MIGAV 244 (704)
T ss_pred HHCCC
T ss_conf 85888