HHsearch alignment for GI: 254780567 and conserved domain: PRK08769
>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.66 E-value=0.001 Score=42.75 Aligned_cols=149 Identities=15% Similarity=0.173 Sum_probs=73.3
Q ss_pred HHHHHHHHHHHC-C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH------H---HHHHHH-H---------------
Q ss_conf 999999985101-6-78849998787778688999999862762013------5---676444-5---------------
Q gi|254780567|r 50 EQAVRLIDSWPS-W-PSRVVILVGPSGSGKSCLANIWSDKSRSTRFS------N---IAKSLD-S--------------- 102 (246)
Q Consensus 50 ~~A~~~i~~~~~-~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~------~---~~~~~~-~--------------- 102 (246)
T Consensus 10 ~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~~i~~g~HPD~~~i~~~~~~~~~k~ 89 (319)
T PRK08769 10 QRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQLIAAGTHPDLQLVSFIPNRTGDKL 89 (319)
T ss_pred HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf 89999999999769942068758999878999999999998379979765433889996689989687753444454311
Q ss_pred ---HHH----------------HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf ---466----------------66665334332100376-1033545554311234215640354320022345667885
Q gi|254780567|r 103 ---ILI----------------DTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRL 162 (246)
Q Consensus 103 ---~~~----------------~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl 162 (246)
T Consensus 90 k~~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEPp-~~~~~iL~~~-~~~~---ll~TI~SRC 164 (319)
T PRK08769 90 RTEIVIEQVREISQKLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEPS-PGRYLWLISA-QPAR---LPATIRSRC 164 (319)
T ss_pred CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC-CCEEEEEEEC-CHHH---CCHHHHHCC
T ss_conf 2348699999999996137202795699980667528999999999822799-8848999869-9365---824776485
Q ss_pred HHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
Q ss_conf 21222450788978999999998666289798899999994066798999
Q gi|254780567|r 163 KAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFA 212 (246)
Q Consensus 163 ~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l 212 (246)
T Consensus 165 q---~~~~~~p~~~~~~~~L~~~----g--~~~~~a~~~l~~a~g~p~~A 205 (319)
T PRK08769 165 Q---RLEFKLPPAHEALAWLLSQ----G--VSERAAQEALDAARGHPGLA 205 (319)
T ss_pred E---EECCCCCCHHHHHHHHHHC----C--CCHHHHHHHHHHHCCCHHHH
T ss_conf 0---1118996999999999975----9--99189999999827996899