HHsearch alignment for GI: 254780567 and conserved domain: PRK08769

>PRK08769 DNA polymerase III subunit delta'; Validated.
Probab=97.66  E-value=0.001  Score=42.75  Aligned_cols=149  Identities=15%  Similarity=0.173  Sum_probs=73.3

Q ss_pred             HHHHHHHHHHHC-C-CCCEEEEECCCCCCHHHHHHHHHHHHCCCCHH------H---HHHHHH-H---------------
Q ss_conf             999999985101-6-78849998787778688999999862762013------5---676444-5---------------
Q gi|254780567|r   50 EQAVRLIDSWPS-W-PSRVVILVGPSGSGKSCLANIWSDKSRSTRFS------N---IAKSLD-S---------------  102 (246)
Q Consensus        50 ~~A~~~i~~~~~-~-~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~~~------~---~~~~~~-~---------------  102 (246)
T Consensus        10 ~~~~~~L~~~i~~~rl~HA~Lf~Gp~G~GK~~~A~~~A~~llc~~~~~~~~~~~~~~i~~g~HPD~~~i~~~~~~~~~k~   89 (319)
T PRK08769         10 QRAFDQTVAALDAGRLGHGLLICGPEGLGKRAVALALAEHVLASGPDPALAQRTRQLIAAGTHPDLQLVSFIPNRTGDKL   89 (319)
T ss_pred             HHHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHCCCCCCEEEEECCCCCCCCCC
T ss_conf             89999999999769942068758999878999999999998379979765433889996689989687753444454311


Q ss_pred             ---HHH----------------HHHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf             ---466----------------66665334332100376-1033545554311234215640354320022345667885
Q gi|254780567|r  103 ---ILI----------------DTRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRL  162 (246)
Q Consensus       103 ---~~~----------------~~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl  162 (246)
T Consensus        90 k~~I~IdqiR~l~~~~~~~p~~g~~KV~IId~Ad~mn~~AaNalLK~LEEPp-~~~~~iL~~~-~~~~---ll~TI~SRC  164 (319)
T PRK08769         90 RTEIVIEQVREISQKLALTPQYGIAQVVIVDPADAINRSACNALLKTLEEPS-PGRYLWLISA-QPAR---LPATIRSRC  164 (319)
T ss_pred             CCCCCHHHHHHHHHHHHHCCCCCCCEEEEECCHHHCCHHHHHHHHHHHCCCC-CCEEEEEEEC-CHHH---CCHHHHHCC
T ss_conf             2348699999999996137202795699980667528999999999822799-8848999869-9365---824776485


Q ss_pred             HHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHH
Q ss_conf             21222450788978999999998666289798899999994066798999
Q gi|254780567|r  163 KAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFA  212 (246)
Q Consensus       163 ~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l  212 (246)
T Consensus       165 q---~~~~~~p~~~~~~~~L~~~----g--~~~~~a~~~l~~a~g~p~~A  205 (319)
T PRK08769        165 Q---RLEFKLPPAHEALAWLLSQ----G--VSERAAQEALDAARGHPGLA  205 (319)
T ss_pred             E---EECCCCCCHHHHHHHHHHC----C--CCHHHHHHHHHHHCCCHHHH
T ss_conf             0---1118996999999999975----9--99189999999827996899