HHsearch alignment for GI: 254780567 and conserved domain: PRK08853
>PRK08853 DNA polymerase III subunits gamma and tau; Validated.
Probab=99.10 E-value=1.4e-08 Score=72.70 Aligned_cols=190 Identities=13% Similarity=0.144 Sum_probs=118.7
Q ss_pred CCCCEEECCCHHHHHHHHHH-HHCCCCCEEEEE-CCCCCCHHHHHHHHHHHHCCCCH----------HHHHH------H-
Q ss_conf 84541653618999999985-101678849998-78777868899999986276201----------35676------4-
Q gi|254780567|r 39 SRDDLLVHSAIEQAVRLIDS-WPSWPSRVVILV-GPSGSGKSCLANIWSDKSRSTRF----------SNIAK------S- 99 (246)
Q Consensus 39 ~~dnFiv~~~N~~A~~~i~~-~~~~~~~~l~i~-G~~GsGKTHLl~a~~~~~~~~~~----------~~~~~------~- 99 (246)
T Consensus 14 ~f~e-~vGQ-~-~v~~~L~nal~~~rl~haylf~G~rGvGKTt~ARi~Ak~lNC~~~~~~~pcg~C~~C~~i~~g~~~d~ 90 (717)
T PRK08853 14 QFKE-VVGQ-S-HVLTALENALAHNRLHHAYLFSGTRGVGKTTIGRLFAKGLNCETGITSTPCGQCATCKEIDEGRFVDL 90 (717)
T ss_pred CHHH-HCCC-H-HHHHHHHHHHHCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHCCCCCCE
T ss_conf 5655-1385-9-99999999997099740576108898889899999999867899999997888702676744787752
Q ss_pred ------------HHHH---------HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCC-CCCEEEEECCCCCCHHHHHHH
Q ss_conf ------------4454---------666666533433210037610335455543112-342156403543200223456
Q gi|254780567|r 100 ------------LDSI---------LIDTRKPVLLEDIDLLDFNDTQLFHIINSIHQY-DSSLLMTARTFPVSWGVCLPD 157 (246)
Q Consensus 100 ------------~~~~---------~~~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~-~~~iilts~~~p~~~~~~l~D 157 (246)
T Consensus 91 ~EiDaAs~~~vdd~rel~~~~~y~p~~~~yKvyiiDEvHmls~~--afnAlLKtlEEPP~hv~FilaTT~~~kip~---T 165 (717)
T PRK08853 91 LEIDAASRTKVEDTRELLDNVQYKPARGRFKVYLIDEVHMLSRH--SFNALLKTLEEPPEYVKFLLATTDPQKLPV---T 165 (717)
T ss_pred EEECCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEECHHHCCHH--HHHHHHHHHCCCCCCEEEEEECCCHHHCCH---H
T ss_conf 45405656788999999985554887785479998305443899--999998760378756489984387343738---8
Q ss_pred HHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
Q ss_conf 67885212224507889789999999986662897988999999940667989999999999999998477878899999
Q gi|254780567|r 158 LCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLVDKMDNLALSRGMGITRSLAAE 237 (246)
Q Consensus 158 L~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l~~Ld~~sl~~kr~ITi~lvk~ 237 (246)
T Consensus 166 ilSRc---~~f~l~~~~~~~i~~~l~~i~~~E~i~~~~~al~~ia~~a~Gs~Rdalsl~dqa---ia~~~g~~~~~~v~~ 239 (717)
T PRK08853 166 ILSRC---LQFHLKPISVDQIHQQLDFVLDKEQVSAEARALGLIAHAADGSMRDALSLTDQA---IALGNGQVTTDIVSH 239 (717)
T ss_pred HHHHH---HHCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHH---HHHCCCCCCHHHHHH
T ss_conf 98765---442326899999999999999975987699999999997688377888899999---996589716999999
Q ss_pred HHHHH
Q ss_conf 99867
Q gi|254780567|r 238 VLKET 242 (246)
Q Consensus 238 vL~~~ 242 (246)
T Consensus 240 mlg~~ 244 (717)
T PRK08853 240 MLGTL 244 (717)
T ss_pred HHCCC
T ss_conf 85888