HHsearch alignment for GI: 254780567 and conserved domain: PRK11331
>PRK11331 5-methylcytosine-specific restriction enzyme subunit McrB; Provisional.
Probab=96.33 E-value=0.0038 Score=39.25 Aligned_cols=25 Identities=32% Similarity=0.486 Sum_probs=21.3
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 8849998787778688999999862
Q gi|254780567|r 64 SRVVILVGPSGSGKSCLANIWSDKS 88 (246)
Q Consensus 64 ~~~l~i~G~~GsGKTHLl~a~~~~~ 88 (246)
T Consensus 194 KknvIL~G~pGtGKT~lAk~lA~~l 218 (459)
T PRK11331 194 KKNIILQGPPGVGKTFVARRLAYLL 218 (459)
T ss_pred CCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 8827965899988789999999997