HHsearch alignment for GI: 254780567 and conserved domain: PRK13894
>PRK13894 conjugal transfer ATPase TrbB; Provisional.
Probab=96.18 E-value=0.062 Score=31.79 Aligned_cols=54 Identities=19% Similarity=0.239 Sum_probs=35.0
Q ss_pred CCCCCCCCCEEECCC-HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 776688454165361-8999999985101678849998787778688999999862
Q gi|254780567|r 34 RCLGISRDDLLVHSA-IEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKS 88 (246)
Q Consensus 34 ~~~~~~~dnFiv~~~-N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~ 88 (246)
T Consensus 119 ~~~~~tL~dlv~~G~~~~~~a~~L~~~V~-~r~nilI~G~TgsGKTTll~all~~i 173 (320)
T PRK13894 119 AVAIFTLDQYVERGIMTAEQREAIIAAVR-AHRNILVIGGTGSGKTTLVNAIINEM 173 (320)
T ss_pred CCCCCCHHHHHHCCCCCHHHHHHHHHHHH-CCCCEEEECCCCCCHHHHHHHHHHHH
T ss_conf 89999999998769999999999999997-28758998588865689999998632