HHsearch alignment for GI: 254780567 and conserved domain: TIGR02237
>TIGR02237 recomb_radB DNA repair and recombination protein RadB; InterPro: IPR011939 This family consists exclusively of archaeal RadB protein, a homolog of bacterial RecA, eukaryotic RAD51 (IPR011941 from INTERPRO) and DMC1 (IPR011940 from INTERPRO), and archaeal RadA (IPR011938 from INTERPRO) ,, .; GO: 0003684 damaged DNA binding, 0005524 ATP binding, 0008094 DNA-dependent ATPase activity, 0006281 DNA repair, 0006310 DNA recombination.
Probab=95.56 E-value=0.007 Score=37.62 Aligned_cols=61 Identities=10% Similarity=-0.000 Sum_probs=32.9
Q ss_pred HHHHHHHHHHCCCCCEEEEE----CCCC----CCHHHHHHHHHHHHHHCCEEEECCCCH-HHHHHHHHHHHH
Q ss_conf 33545554311234215640----3543----200223456678852122245078897-899999999866
Q gi|254780567|r 125 QLFHIINSIHQYDSSLLMTA----RTFP----VSWGVCLPDLCSRLKAATVVKISLPDD-DFLEKVIVKMFA 187 (246)
Q Consensus 125 ~lf~l~n~~~~~~~~iilts----~~~p----~~~~~~l~DL~SRl~~g~~~~I~~pdd-e~~~~il~k~~~ 187 (246)
T Consensus 137 Ql~~Ll~lArk~~~AVviTNQvy~d~~~gG~~~~~P~GG~~L~--h~~K~i~rLE~~~r~G~R~a~L~kHR~ 206 (223)
T TIGR02237 137 QLTLLLSLARKKDLAVVITNQVYTDVNNGGSETLRPLGGHLLE--HWSKVILRLEKLNRVGRRKATLEKHRS 206 (223)
T ss_pred HHHHHHHHHHHCCCCEEEEEEEEEEECCCCCCEEEECCCHHHH--HHHCEEEEEECCCCCCCEEEEEEECCC
T ss_conf 9999999987649978997115886377973201003311343--110213356447898742456654055