HHsearch alignment for GI: 254780567 and conserved domain: TIGR02546

>TIGR02546 III_secr_ATP type III secretion apparatus H+-transporting two-sector ATPase; InterPro: IPR013380 Proteins in this entry are found in a variety of bacteria, and are predicted to be ATPases involved in type III secretion systems. One example is YscN (P40290 from SWISSPROT) from Yersinia enterocolitica, which is thought to energise the YOP (Yersinia outer protein) secretion system .; GO: 0046961 hydrogen ion transporting ATPase activity rotational mechanism, 0030254 protein secretion by the type III secretion system.
Probab=95.17  E-value=0.012  Score=36.24  Aligned_cols=42  Identities=21%  Similarity=0.249  Sum_probs=31.7

Q ss_pred             HHHHHHHHHH-CCCCCEEEEECCCCCCHHHHHHHHHHHHCCCC
Q ss_conf             9999998510-16788499987877786889999998627620
Q gi|254780567|r   51 QAVRLIDSWP-SWPSRVVILVGPSGSGKSCLANIWSDKSRSTR   92 (246)
Q Consensus        51 ~A~~~i~~~~-~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~~   92 (246)
T Consensus       139 tGvRaiDGlLTcG~GQRiGIFA~aG~GKSTLL~~i~~g~~ADv  181 (430)
T TIGR02546       139 TGVRAIDGLLTCGEGQRIGIFAGAGVGKSTLLGMIARGASADV  181 (430)
T ss_pred             HHHHHHHHHHHCCCCCEEEEEECCCCCHHHHHHHHHCCCCCCE
T ss_conf             1466754344036653057870888616689999861898878