HHsearch alignment for GI: 254780567 and conserved domain: TIGR02881
>TIGR02881 spore_V_K stage V sporulation protein K; InterPro: IPR014232 Proteins in this entry include the stage V sporulation protein K (SpoVK), a close homologue of the Rubisco expression protein CbbX (IPR000470 from INTERPRO), and are members of an ATPase family associated with various cellular activities. These proteins are strictly limited to bacterial endospore-forming species, but are not found universally among members of this group; they are missing from the Clostridium species..
Probab=98.14 E-value=0.0001 Score=48.84 Aligned_cols=164 Identities=13% Similarity=0.274 Sum_probs=106.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCC-------------------CCHHHHHHHHHHHHHHHH-HHHHHHHHHCC------C
Q ss_conf 999878777868899999986276-------------------201356764445466666-65334332100------3
Q gi|254780567|r 67 VILVGPSGSGKSCLANIWSDKSRS-------------------TRFSNIAKSLDSILIDTR-KPVLLEDIDLL------D 120 (246)
Q Consensus 67 l~i~G~~GsGKTHLl~a~~~~~~~-------------------~~~~~~~~~~~~~~~~~~-~~i~iddi~~~------~ 120 (246)
T Consensus 45 MiFKGNPGTGKTTVAR~~gklf~emnvL~KGH~iE~ERADLVGEYIGHTAqkTRe~~kkA~GGvLFiDEAYSLaRGGEKD 124 (261)
T TIGR02881 45 MIFKGNPGTGKTTVARLLGKLFKEMNVLSKGHLIEVERADLVGEYIGHTAQKTREVIKKALGGVLFIDEAYSLARGGEKD 124 (261)
T ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCC
T ss_conf 77427866843899999999985337567886788762221223203004899999998638800557777761488887
Q ss_pred CCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH---HHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHH
Q ss_conf 76103354555431123421564035432002234---566788521222450788978999999998666289798899
Q gi|254780567|r 121 FNDTQLFHIINSIHQYDSSLLMTARTFPVSWGVCL---PDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKL 197 (246)
Q Consensus 121 ~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l---~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v 197 (246)
T Consensus 125 FGKEAIDtLVK~mEd~~~~lvlILAGY~~EM~yFL~~NPGL~SRFP--i~i~FPdY~~eeL~~Ia~~m~~~ReY~Lt~~A 202 (261)
T TIGR02881 125 FGKEAIDTLVKAMEDQRNELVLILAGYSDEMDYFLSLNPGLRSRFP--ISIDFPDYTVEELMEIAERMVKEREYKLTEEA 202 (261)
T ss_pred CCCHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHCCCCCCCCCC--CEEECCCCCHHHHHHHHHHHHHHHHHCCCHHH
T ss_conf 6620888999987615698689970876899998620779777665--05418899888999999999864642257889
Q ss_pred HHHHHHCCC----------CCHHHHHHHHHH-H--HHHHHHHCCCCCH
Q ss_conf 999994066----------798999999999-9--9999984778788
Q gi|254780567|r 198 AAYIVQRME----------RSLVFAEKLVDK-M--DNLALSRGMGITR 232 (246)
Q Consensus 198 ~~yl~~r~~----------Rs~~~l~~~l~~-L--d~~sl~~kr~ITi 232 (246)
T Consensus 203 ~~~lr~~l~~~~~~~~~~~sNaR~vRN~iE~AIR~QAvRlL~~~~~~k 250 (261)
T TIGR02881 203 KWKLREHLAKVDQLSSREFSNARYVRNIIEKAIRRQAVRLLKKSDYSK 250 (261)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHCCCCCCH
T ss_conf 999999974124442100576201242889999999987643464358