HHsearch alignment for GI: 254780567 and conserved domain: TIGR03015

>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=99.28  E-value=2e-09  Score=77.93  Aligned_cols=206  Identities=14%  Similarity=0.099  Sum_probs=135.0

Q ss_pred             CCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHHHHHH---H-------
Q ss_conf             66884541653618999999985101678849998787778688999999862762-----01356764---4-------
Q gi|254780567|r   36 LGISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSNIAKS---L-------  100 (246)
Q Consensus        36 ~~~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~~~~~---~-------  100 (246)
T Consensus        15 ~~pd~~~~y~s~~h~~al~~L~~~l~~~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~   94 (269)
T TIGR03015        15 LLPDPDFFYPSKGHKRAMAYLEYGLSQREGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAAD   94 (269)
T ss_pred             CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf             99984541478669999999999996489659997299898899999999845934548999769999999999999998


Q ss_pred             ---H------HH---HHH----------HHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC--CEEEEECCCCCCHH--H
Q ss_conf             ---4------54---666----------6665334332100376-1033545554311234--21564035432002--2
Q gi|254780567|r  101 ---D------SI---LID----------TRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS--SLLMTARTFPVSWG--V  153 (246)
Q Consensus       101 ---~------~~---~~~----------~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~--~iilts~~~p~~~~--~  153 (246)
T Consensus        95 lg~~~~~~~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~~~ll~iiL~GqpeL~~~L~~~  174 (269)
T TIGR03015        95 FGLETEGRDKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSNFQTDNAKLLQIFLVGQPEFRETLQSP  174 (269)
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCC
T ss_conf             59898898999999999999999996699469997242219999999999997013588870489995786799987274


Q ss_pred             HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCC----CCCHHHHHHHHHCCCCCHHHHHHHHHH-HHHHHHHHCC
Q ss_conf             34566788521222450788978999999998666289----798899999994066798999999999-9999998477
Q gi|254780567|r  154 CLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQI----FIDKKLAAYIVQRMERSLVFAEKLVDK-MDNLALSRGM  228 (246)
Q Consensus       154 ~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i----~l~~~v~~yl~~r~~Rs~~~l~~~l~~-Ld~~sl~~kr  228 (246)
T Consensus       175 ~~~~l~qRI--~~~~~L~pl~~eet~~YI~~RL~~AG~~~~~~Ft~~A~~~I~~~S~G~PR~IN~Lc~~aLl~a~~~~~~  252 (269)
T TIGR03015       175 QLQQLRQRI--IASCHLGPLDREETREYIEHRLERAGNRDAPVFSEGAFDAIHRFSRGIPRLINILCDRLLLSAFLEEKR  252 (269)
T ss_pred             CHHHHHHCE--EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf             025455507--679984799989999999999986699999985999999999986990089999999999999994888


Q ss_pred             CCCHHHHHHHHHHHH
Q ss_conf             878899999998674
Q gi|254780567|r  229 GITRSLAAEVLKETQ  243 (246)
Q Consensus       229 ~ITi~lvk~vL~~~~  243 (246)
T Consensus       253 ~I~~~~v~~~~~el~  267 (269)
T TIGR03015       253 EIGGEEVREVIAEID  267 (269)
T ss_pred             CCCHHHHHHHHHHHC
T ss_conf             679999999999762