HHsearch alignment for GI: 254780567 and conserved domain: TIGR03015
>TIGR03015 pepcterm_ATPase putative secretion ATPase, PEP-CTERM locus subfamily. Members of this protein are marked as probable ATPases by the nucleotide binding P-loop motif GXXGXGKTT, a motif DEAQ similar to the DEAD/H box of helicases, and extensive homology to ATPases of MSHA-type pilus systems and to GspA proteins associated with type II protein secretion systems.
Probab=99.28 E-value=2e-09 Score=77.93 Aligned_cols=206 Identities=14% Similarity=0.099 Sum_probs=135.0
Q ss_pred CCCCCCCEEECCCHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHCCC-----CHHHHHHH---H-------
Q ss_conf 66884541653618999999985101678849998787778688999999862762-----01356764---4-------
Q gi|254780567|r 36 LGISRDDLLVHSAIEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSRST-----RFSNIAKS---L------- 100 (246)
Q Consensus 36 ~~~~~dnFiv~~~N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~~~-----~~~~~~~~---~------- 100 (246)
T Consensus 15 ~~pd~~~~y~s~~h~~al~~L~~~l~~~~g~~lltGe~GtGKTtllr~l~~~l~~~~~~~~~i~~~~l~~~~ll~~i~~~ 94 (269)
T TIGR03015 15 LLPDPDFFYPSKGHKRAMAYLEYGLSQREGFILITGEVGAGKTTLIRNLLKRLDQERVVAAKLVNTRVDAEDLLRMVAAD 94 (269)
T ss_pred CCCCHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHH
T ss_conf 99984541478669999999999996489659997299898899999999845934548999769999999999999998
Q ss_pred ---H------HH---HHH----------HHHHHHHHHHHCCCCC-CHHHHHHHHHHHCCCC--CEEEEECCCCCCHH--H
Q ss_conf ---4------54---666----------6665334332100376-1033545554311234--21564035432002--2
Q gi|254780567|r 101 ---D------SI---LID----------TRKPVLLEDIDLLDFN-DTQLFHIINSIHQYDS--SLLMTARTFPVSWG--V 153 (246)
Q Consensus 101 ---~------~~---~~~----------~~~~i~iddi~~~~~~-ee~lf~l~n~~~~~~~--~iilts~~~p~~~~--~ 153 (246)
T Consensus 95 lg~~~~~~~~~~~~~~l~~~L~~~~~~g~~~vliIDEAq~L~~~~Le~Lr~L~n~e~~~~~ll~iiL~GqpeL~~~L~~~ 174 (269)
T TIGR03015 95 FGLETEGRDKAALLRELEDFLIEQFAAGKRALLVVDEAQNLTPELLEELRMLSNFQTDNAKLLQIFLVGQPEFRETLQSP 174 (269)
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECHHHCCHHHHHHHHHHHCCCCCCCCCEEEEEECCHHHHHHHCCC
T ss_conf 59898898999999999999999996699469997242219999999999997013588870489995786799987274
Q ss_pred HHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCC----CCCHHHHHHHHHCCCCCHHHHHHHHHH-HHHHHHHHCC
Q ss_conf 34566788521222450788978999999998666289----798899999994066798999999999-9999998477
Q gi|254780567|r 154 CLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQI----FIDKKLAAYIVQRMERSLVFAEKLVDK-MDNLALSRGM 228 (246)
Q Consensus 154 ~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i----~l~~~v~~yl~~r~~Rs~~~l~~~l~~-Ld~~sl~~kr 228 (246)
T Consensus 175 ~~~~l~qRI--~~~~~L~pl~~eet~~YI~~RL~~AG~~~~~~Ft~~A~~~I~~~S~G~PR~IN~Lc~~aLl~a~~~~~~ 252 (269)
T TIGR03015 175 QLQQLRQRI--IASCHLGPLDREETREYIEHRLERAGNRDAPVFSEGAFDAIHRFSRGIPRLINILCDRLLLSAFLEEKR 252 (269)
T ss_pred CHHHHHHCE--EEEEEECCCCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCC
T ss_conf 025455507--679984799989999999999986699999985999999999986990089999999999999994888
Q ss_pred CCCHHHHHHHHHHHH
Q ss_conf 878899999998674
Q gi|254780567|r 229 GITRSLAAEVLKETQ 243 (246)
Q Consensus 229 ~ITi~lvk~vL~~~~ 243 (246)
T Consensus 253 ~I~~~~v~~~~~el~ 267 (269)
T TIGR03015 253 EIGGEEVREVIAEID 267 (269)
T ss_pred CCCHHHHHHHHHHHC
T ss_conf 679999999999762