HHsearch alignment for GI: 254780567 and conserved domain: cd00464
>cd00464 SK Shikimate kinase (SK) is the fifth enzyme in the shikimate pathway, a seven-step biosynthetic pathway which converts erythrose-4-phosphate to chorismic acid, found in bacteria, fungi and plants. Chorismic acid is a important intermediate in the synthesis of aromatic compounds, such as aromatic amino acids, p-aminobenzoic acid, folate and ubiquinone. Shikimate kinase catalyses the phosphorylation of the 3-hydroxyl group of shikimic acid using ATP.
Probab=96.55 E-value=0.013 Score=35.88 Aligned_cols=112 Identities=13% Similarity=0.164 Sum_probs=56.6
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC------CHHHHHHHHHHHCCCCCE
Q ss_conf 99987877786889999998627620135676444546666665334332100376------103354555431123421
Q gi|254780567|r 67 VILVGPSGSGKSCLANIWSDKSRSTRFSNIAKSLDSILIDTRKPVLLEDIDLLDFN------DTQLFHIINSIHQYDSSL 140 (246)
Q Consensus 67 l~i~G~~GsGKTHLl~a~~~~~~~~~~~~~~~~~~~~~~~~~~~i~iddi~~~~~~------ee~lf~l~n~~~~~~~~i 140 (246)
T Consensus 2 I~LiG~~G~GKstigk~la~~l~~~fiD~D~~I-e~-----~~g~si~eif~~~Ge~~FR~~E~~~---l~~~~~~~~~V 72 (154)
T cd00464 2 IVLIGMMGAGKTTVGRLLAKALGLPFVDLDELI-EQ-----RAGMSIPEIFAEEGEEGFRELEREV---LLLLLTKENAV 72 (154)
T ss_pred EEEECCCCCCHHHHHHHHHHHHCCCEEECCHHH-HH-----HHCCCHHHHHHHCCHHHHHHHHHHH---HHHHHCCCCEE
T ss_conf 899889999889999999999798979685999-99-----9499999999874938789999999---99985689859
Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCC
Q ss_conf 56403543200223456678852122245078897899999999866628979
Q gi|254780567|r 141 LMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFI 193 (246)
Q Consensus 141 ilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l 193 (246)
T Consensus 73 Is~GGG~v~~~~~-~~~l---~~~~~vI~L~~~~~~l~~Rl~~--~~~RPll~ 119 (154)
T cd00464 73 IATGGGAVLREEN-RRLL---LENGIVVWLDASPEELLERLAR--DKTRPLLQ 119 (154)
T ss_pred EECCCCCCCCHHH-HHHH---HHCCEEEEEECCHHHHHHHHHC--CCCCCCCC
T ss_conf 9738973368999-9999---9579089995799999999607--99999888