HHsearch alignment for GI: 254780567 and conserved domain: cd03245
>cd03245 ABCC_bacteriocin_exporters ABC-type bacteriocin exporters. Many non-lantibiotic bacteriocins of lactic acid bacteria are produced as precursors which have N-terminal leader peptides that share similarities in amino acid sequence and contain a conserved processing site of two glycine residues in positions -1 and -2. A dedicated ATP-binding cassette (ABC) transporter is responsible for the proteolytic cleavage of the leader peptides and subsequent translocation of the bacteriocins across the cytoplasmic membrane.
Probab=95.35 E-value=0.016 Score=35.33 Aligned_cols=27 Identities=30% Similarity=0.423 Sum_probs=22.8
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 678849998787778688999999862
Q gi|254780567|r 62 WPSRVVILVGPSGSGKSCLANIWSDKS 88 (246)
Q Consensus 62 ~~~~~l~i~G~~GsGKTHLl~a~~~~~ 88 (246)
T Consensus 28 ~~G~~v~ivG~sGsGKSTLl~ll~gl~ 54 (220)
T cd03245 28 RAGEKVAIIGRVGSGKSTLLKLLAGLY 54 (220)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 799999999999985999999996725