HHsearch alignment for GI: 254780567 and conserved domain: cd03254
>cd03254 ABCC_Glucan_exporter_like Glucan exporter ATP-binding protein. In A. tumefaciens cyclic beta-1, 2-glucan must be transported into the periplasmic space to exert its action as a virluence factor. This subfamily belongs to the MRP-like family and is involved in drug, peptide, and lipid export. The MRP-like family, similar to all ABC proteins, have a common four-domain core structure constituted by two membrane-spanning domains each composed of six transmembrane (TM) helices and two nucleotide-binding domains (NBD). ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.51 E-value=0.014 Score=35.73 Aligned_cols=27 Identities=37% Similarity=0.619 Sum_probs=23.3
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 678849998787778688999999862
Q gi|254780567|r 62 WPSRVVILVGPSGSGKSCLANIWSDKS 88 (246)
Q Consensus 62 ~~~~~l~i~G~~GsGKTHLl~a~~~~~ 88 (246)
T Consensus 27 ~~Ge~vaivG~sGsGKSTLl~ll~gl~ 53 (229)
T cd03254 27 KPGETVAIVGPTGAGKTTLINLLMRFY 53 (229)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCCC
T ss_conf 799999999999980999999996686