HHsearch alignment for GI: 254780567 and conserved domain: cd03256
>cd03256 ABC_PhnC_transporter ABC-type phosphate/phosphonate transport system. Phosphonates are a class of organophosphorus compounds characterized by a chemically stable carbon-to-phosphorus (C-P) bond. Phosphonates are widespread among naturally occurring compounds in all kingdoms of wildlife, but only procaryotic microorganisms are able to cleave this bond. Certain bacteria such as E. coli can use alkylphosphonates as a phosphorus source. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=96.11 E-value=0.0055 Score=38.26 Aligned_cols=26 Identities=42% Similarity=0.647 Sum_probs=22.6
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 67884999878777868899999986
Q gi|254780567|r 62 WPSRVVILVGPSGSGKSCLANIWSDK 87 (246)
Q Consensus 62 ~~~~~l~i~G~~GsGKTHLl~a~~~~ 87 (246)
T Consensus 25 ~~Ge~~~iiGpsGsGKSTLl~~i~gl 50 (241)
T cd03256 25 NPGEFVALIGPSGAGKSTLLRCLNGL 50 (241)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 99989999999983399999999749