HHsearch alignment for GI: 254780567 and conserved domain: cd03261
>cd03261 ABC_Org_Solvent_Resistant ABC (ATP-binding cassette) transport system involved in resistant to organic solvents; ABC transporters are a large family of proteins involved in the transport of a wide variety of different compounds, like sugars, ions, peptides, and more complex organic molecules. The nucleotide binding domain shows the highest similarity between all members of the family. ABC transporters are a subset of nucleotide hydrolases that contain a signature motif, Q-loop, and H-loop/switch region, in addition to, the Walker A motif/P-loop and Walker B motif commonly found in a number of ATP- and GTP-binding and hydrolyzing proteins.
Probab=95.91 E-value=0.0078 Score=37.32 Aligned_cols=26 Identities=35% Similarity=0.592 Sum_probs=22.3
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHH
Q ss_conf 67884999878777868899999986
Q gi|254780567|r 62 WPSRVVILVGPSGSGKSCLANIWSDK 87 (246)
Q Consensus 62 ~~~~~l~i~G~~GsGKTHLl~a~~~~ 87 (246)
T Consensus 24 ~~Ge~~~iiG~SGsGKSTll~~i~gL 49 (235)
T cd03261 24 RRGEILAIIGPSGSGKSTLLRLIVGL 49 (235)
T ss_pred CCCCEEEEECCCCCHHHHHHHHHHCC
T ss_conf 79989999999997299999999759