HHsearch alignment for GI: 254780567 and conserved domain: cd03288
>cd03288 ABCC_SUR2 The SUR domain 2. The sulfonylurea receptor SUR is an ATP binding cassette (ABC) protein of the ABCC/MRP family. Unlike other ABC proteins, it has no intrinsic transport function, neither active nor passive, but associates with the potassium channel proteins Kir6.1 or Kir6.2 to form the ATP-sensitive potassium (K(ATP)) channel. Within the channel complex, SUR serves as a regulatory subunit that fine-tunes the gating of Kir6.x in response to alterations in cellular metabolism. It constitutes a major pharmaceutical target as it binds numerous drugs, K(ATP) channel openers and blockers, capable of up- or down-regulating channel activity.
Probab=94.92 E-value=0.028 Score=33.94 Aligned_cols=27 Identities=33% Similarity=0.415 Sum_probs=22.8
Q ss_pred CCCCEEEEECCCCCCHHHHHHHHHHHH
Q ss_conf 678849998787778688999999862
Q gi|254780567|r 62 WPSRVVILVGPSGSGKSCLANIWSDKS 88 (246)
Q Consensus 62 ~~~~~l~i~G~~GsGKTHLl~a~~~~~ 88 (246)
T Consensus 45 ~~Ge~vaIvG~sGsGKSTL~~ll~gl~ 71 (257)
T cd03288 45 KPGQKVGICGRTGSGKSSLSLAFFRMV 71 (257)
T ss_pred CCCCEEEEECCCCCCHHHHHHHHHHCC
T ss_conf 799999999999981999999996056