HHsearch alignment for GI: 254780567 and conserved domain: pfam00437
>pfam00437 GSPII_E Type II/IV secretion system protein. This family contains both type II and type IV pathway secretion proteins from bacteria. VirB11 ATPase is a subunit of the Agrobacterium tumefaciens transfer DNA (T-DNA) transfer system, a type IV secretion pathway required for delivery of T-DNA and effector proteins to plant cells during infection.
Probab=96.71 E-value=0.0028 Score=40.11 Aligned_cols=54 Identities=19% Similarity=0.244 Sum_probs=35.1
Q ss_pred CCCCCCCCEEECCC-HHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHC
Q ss_conf 76688454165361-89999999851016788499987877786889999998627
Q gi|254780567|r 35 CLGISRDDLLVHSA-IEQAVRLIDSWPSWPSRVVILVGPSGSGKSCLANIWSDKSR 89 (246)
Q Consensus 35 ~~~~~~dnFiv~~~-N~~A~~~i~~~~~~~~~~l~i~G~~GsGKTHLl~a~~~~~~ 89 (246)
T Consensus 110 ~~~~tl~~L~~~g~~~~~~~~~L~~~v~-~~~~ilIsG~TGSGKTT~l~all~~i~ 164 (283)
T pfam00437 110 SRSLTLDDLGMTGAFDADIAEFLRQAVQ-ARGNILVSGGTGSGKTTLLYALLNEIN 164 (283)
T ss_pred CCCCCHHHHCCCCCCHHHHHHHHHHHHH-CCCEEEEECCCCCCHHHHHHHHHHHCC
T ss_conf 7789999973897785999999999998-197599988999988999999998408