HHsearch alignment for GI: 254780567 and conserved domain: pfam00910
>pfam00910 RNA_helicase RNA helicase. This family includes RNA helicases thought to be involved in duplex unwinding during viral RNA replication. Members of this family are found in a variety of single stranded RNA viruses.
Probab=96.68 E-value=0.0012 Score=42.26 Aligned_cols=53 Identities=23% Similarity=0.246 Sum_probs=30.7
Q ss_pred EEEECCCCCCHHHHHHHHHHHHCC---------CCHHHHHHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999878777868899999986276---------201356764445466666653343321003
Q gi|254780567|r 67 VILVGPSGSGKSCLANIWSDKSRS---------TRFSNIAKSLDSILIDTRKPVLLEDIDLLD 120 (246)
Q Consensus 67 l~i~G~~GsGKTHLl~a~~~~~~~---------~~~~~~~~~~~~~~~~~~~~i~iddi~~~~ 120 (246)
T Consensus 1 i~l~G~~G~GKS~~a~~la~~~~~~~~~~~~~~~Y~~~~~~~~wdg-Y~gq~vvi~DD~~~~~ 62 (105)
T pfam00910 1 IWLYGPPGCGKSTLAKYLARALLDHLGLPKKDSVYSRNPDDDFWDG-YTGQPVVIIDDFGQNP 62 (105)
T ss_pred CEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCCC-CCCCEEEEEECCCCCC
T ss_conf 9897999898899999999999998377878977967887765678-8998579996577788