HHsearch alignment for GI: 254780567 and conserved domain: pfam00931

Probab=98.14  E-value=5.4e-05  Score=50.63  Aligned_cols=141  Identities=16%  Similarity=0.152  Sum_probs=71.6

Q ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHC------CCCHHHHHH-------------HH----------HHH--------HH
Q ss_conf             788499987877786889999998627------620135676-------------44----------454--------66
Q gi|254780567|r   63 PSRVVILVGPSGSGKSCLANIWSDKSR------STRFSNIAK-------------SL----------DSI--------LI  105 (246)
Q Consensus        63 ~~~~l~i~G~~GsGKTHLl~a~~~~~~------~~~~~~~~~-------------~~----------~~~--------~~  105 (246)
T Consensus        18 ~~~vI~I~G~gGiGKTtLA~~v~~~~~i~~~F~~~~wv~vs~~~~~~~i~~~i~~~l~~~~~~~~~~~~~~l~~~l~~~L   97 (285)
T pfam00931        18 NLGVVGIVGMGGVGKTTLAKQIYNDDSVGGHFDSVAWVVVSKTYTEFRLQKDILQELGLDDSDWVEKNESELAVKIKEAL   97 (285)
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHCCHHHHHCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             95399988999563999999997165565059838999979766689999999998566654555578999999999997


Q ss_pred             -HHHHHHHHHHHHCCCCCCHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHH-HCCEEEECCCCHHHHHHHHH
Q ss_conf             -6666533433210037610335455543112342156403543200223456678852-12224507889789999999
Q gi|254780567|r  106 -DTRKPVLLEDIDLLDFNDTQLFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLK-AATVVKISLPDDDFLEKVIV  183 (246)
Q Consensus       106 -~~~~~i~iddi~~~~~~ee~lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~-~g~~~~I~~pdde~~~~il~  183 (246)
T Consensus        98 ~~kr~LiVLDDVw~~~~~-~~l~~~~~~-~~~gSrIIvTTR~~---------~V~~~~~~~~~~~~l~~L~~~es~~Lf~  166 (285)
T pfam00931        98 LRKRFLLVLDDVWEKNDW-DKIGVPFPD-GENGSRVIVTTRSE---------SVAGRMGGTSKPHEVESLEPEESWELFS  166 (285)
T ss_pred             CCCCEEEEECCCCCHHHH-HHHHCCCCC-CCCCCEEEEECCCH---------HHHHHCCCCCCEEECCCCCHHHHHHHHH
T ss_conf             279669996388878999-997345757-89982799855758---------9998737888347616898799999999


Q ss_pred             HHHHHCCCCCCH---HHHHHHHHCCCCCHHHHHH
Q ss_conf             986662897988---9999999406679899999
Q gi|254780567|r  184 KMFADRQIFIDK---KLAAYIVQRMERSLVFAEK  214 (246)
Q Consensus       184 k~~~~r~i~l~~---~v~~yl~~r~~Rs~~~l~~  214 (246)
T Consensus       167 ~~a~~~~~~~~~~l~~~~~~Iv~~C~GlPLai~~  200 (285)
T pfam00931       167 NKVFEKELPPCPELEEVAKEIVEKCKGLPLALKV  200 (285)
T ss_pred             HHHCCCCCCCCHHHHHHHHHHHHHHCCCHHHHHH
T ss_conf             9846898999767999999999985899499999