HHsearch alignment for GI: 254780567 and conserved domain: pfam05729

>pfam05729 NACHT NACHT domain. This NTPase domain is found in apoptosis proteins as well as those involved in MHC transcription activation. This family is closely related to pfam00931.
Probab=97.69  E-value=0.00032  Score=45.87  Aligned_cols=57  Identities=23%  Similarity=0.253  Sum_probs=39.8

Q ss_pred             HHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHH
Q ss_conf             354555431123421564035432002234566788521222450788978999999998666
Q gi|254780567|r  126 LFHIINSIHQYDSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFAD  188 (246)
Q Consensus       126 lf~l~n~~~~~~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~  188 (246)
T Consensus       108 l~~ll~~~~lp~~~vliTsRp~------~~~~l~~~~~~~~~~ei~GFs~~~~~~yi~~~F~~  164 (165)
T pfam05729       108 LSSLLRKKLLPGASLLLTSRPD------ALRDLRRGLEEPRYLEVLGFSEEDRKQYVRKYFSD  164 (165)
T ss_pred             HHHHHHHCCCCCCEEEEEECCC------HHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHCCC
T ss_conf             9999841527886499996803------79885776488718998899999999999986799