HHsearch alignment for GI: 254780567 and conserved domain: pfam06144
>pfam06144 DNA_pol3_delta DNA polymerase III, delta subunit. DNA polymerase III, delta subunit (EC 2.7.7.7) is required for, along with delta' subunit, the assembly of the processivity factor beta(2) onto primed DNA in the DNA polymerase III holoenzyme-catalysed reaction. The delta subunit is also known as HolA.
Probab=96.68 E-value=0.016 Score=35.35 Aligned_cols=80 Identities=20% Similarity=0.134 Sum_probs=60.6
Q ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHHCCEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHHHHHHH
Q ss_conf 34215640354320022345667885212224507889789999999986662897988999999940667989999999
Q gi|254780567|r 137 DSSLLMTARTFPVSWGVCLPDLCSRLKAATVVKISLPDDDFLEKVIVKMFADRQIFIDKKLAAYIVQRMERSLVFAEKLV 216 (246)
Q Consensus 137 ~~~iilts~~~p~~~~~~l~DL~SRl~~g~~~~I~~pdde~~~~il~k~~~~r~i~l~~~v~~yl~~r~~Rs~~~l~~~l 216 (246)
T Consensus 91 ~~~lv~~~~~~~~~~~---k~~k~l~k~~~~i~~~~~~~~~l~~wi~~~~~~~g~~i~~~a~~~L~~~~g~nl~~l~~Ei 167 (172)
T pfam06144 91 DTLLIIEAPGKLDERK---KLTKLLKKKATVVECFTLKEEELIQWIQKRAKELGLKIEKDALQLLAEKVENNLLAIAQEL 167 (172)
T ss_pred CEEEEEEECCCHHHHH---HHHHHHHHCCEEEEECCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHCHHHHHHHHHH
T ss_conf 7289998367413678---8899998376699934898789999999999984999899999999999784899999999
Q ss_pred HHH
Q ss_conf 999
Q gi|254780567|r 217 DKM 219 (246)
Q Consensus 217 ~~L 219 (246)
T Consensus 168 eKL 170 (172)
T pfam06144 168 EKL 170 (172)
T ss_pred HHH
T ss_conf 976