HHsearch alignment for GI: 254780567 and conserved domain: smart00382
>smart00382 AAA ATPases associated with a variety of cellular activities. AAA - ATPases associated with a variety of cellular activities. This profile/alignment only detects a fraction of this vast family. The poorly conserved N-terminal helix is missing from the alignment.
Probab=97.24 E-value=0.00087 Score=43.20 Aligned_cols=28 Identities=36% Similarity=0.656 Sum_probs=24.1
Q ss_pred CCEEEEECCCCCCHHHHHHHHHHHHCCC
Q ss_conf 8849998787778688999999862762
Q gi|254780567|r 64 SRVVILVGPSGSGKSCLANIWSDKSRST 91 (246)
Q Consensus 64 ~~~l~i~G~~GsGKTHLl~a~~~~~~~~ 91 (246)
T Consensus 2 ~~~ill~G~~GsGKTtl~~~la~~~~~~ 29 (148)
T smart00382 2 GEVILIVGPPGSGKTTLARALARELGPP 29 (148)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHHHCCC
T ss_conf 9789999999702999999999872668