HHsearch alignment for GI: 254780569 and conserved domain: COG0309
>COG0309 HypE Hydrogenase maturation factor [Posttranslational modification, protein turnover, chaperones].
Probab=99.97 E-value=6.1e-30 Score=230.00 Aligned_cols=293 Identities=20% Similarity=0.272 Sum_probs=210.0
Q ss_pred HHHHHHHHHHCC--C-CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 999999886267--3-5436677731575655446887189995688878999999828855016888885434678854
Q gi|254780569|r 26 TQIKSAVKSTKR--A-GTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHG 102 (357)
Q Consensus 26 ~~i~~~~~~t~~--~-~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~G 102 (357)
T Consensus 16 ~li~~~il~~~~~~~~~v~~~~g~D~~~i~l~~-----~~la~tTD~~~i~P----~ff~~~diG~lAV~gt~NDlav~G 86 (339)
T COG0309 16 ELINKVILPNFGRRDVNVGLANGEDAAIIDLGD-----GVLAFTTDPFVIDP----LFFPGGDIGKLAVHGTANDVAVSG 86 (339)
T ss_pred HHHHHHHHHCCCCCCCCCCCCCCCCEEEEECCC-----CEEEEEECCEEECC----CCCCCCCEEEEEEEEEHHHHHHCC
T ss_conf 999999775168666654865566411340378-----46999818807546----645788628999998622544058
Q ss_pred HHHHHHHHHH-CCCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCC
Q ss_conf 1122110000-033203789999999999999860952214301000001365566336899997415421133345552
Q gi|254780569|r 103 AEPLFFLDYL-ATSQLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAG 181 (357)
Q Consensus 103 A~Pl~fldyi-a~~~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~G 181 (357)
T Consensus 87 A~P~~l~~~lil~eg~~~e~l~~i~~si~e~a~~~Gv~IvtGdTkV~~~~~--~~~vi~tT~iG~~~~~~~v~~~~~~~G 164 (339)
T COG0309 87 AKPRYLSVGLILPEGLPIEDLERILKSIDEEAEEAGVSIVTGDTKVVPGGK--DPIVINTTGIGIIDKEILVSPSGARPG 164 (339)
T ss_pred CCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCCEEECCCCEEECCCC--CCCEEEEEEEEEECCCCCCCCCCCCCC
T ss_conf 986002677735899987899999999999999839749826766615998--772898646775137760145789988
Q ss_pred EEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH
Q ss_conf 48999538655432320344445531155456676666630668753972012268888763046322223454201220
Q gi|254780569|r 182 DLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTE 261 (357)
Q Consensus 182 D~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~ 261 (357)
T Consensus 165 D~vI~tg~~g~h--ga~ila~~~~~~---l-~~~l~sD~~~~~~~~~~~----l~~~~~~~~~--~vtAMhDaTrGGla~ 232 (339)
T COG0309 165 DAVIVTGTIGIH--GASILAHRFGEE---L-ETELGSDCAPLAKLVKAL----LSVVGEALAA--AVTAMHDATRGGLAG 232 (339)
T ss_pred CEEEECCCHHHH--HHHHHHHHCCHH---H-CCCHHHHHHHHHHHHHHH----HHCCHHHHHH--HHHHCCCCCHHHHHH
T ss_conf 889981881688--999998752022---0-332356678889999988----6200577665--676503875367889
Q ss_pred CCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCC-CCEEEEEEE
Q ss_conf 120025-443047871004898679999999669898898765246711699986898999999999779-980899999
Q gi|254780569|r 262 NIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENN-ENIILIGEV 339 (357)
Q Consensus 262 nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g-~~a~iIG~V 339 (357)
T Consensus 233 aLnEmA~aSgvgi~I~ee~Ipv~~eVr~vce~lGiDPl~~a---nEG~-lv~~V~~~~a~~~l~~L~~~~~~~A~iIGeV 308 (339)
T COG0309 233 ALNEMAEASGVGISIEEEKIPVREEVRGVCELLGLDPLELA---NEGK-LVIAVPPEHAEEVLEALRSHGLKDAAIIGEV 308 (339)
T ss_pred HHHHHHHHCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHH---CCCE-EEEEECHHHHHHHHHHHHHCCCCCCEEEEEE
T ss_conf 99999997498499962466664899999998398878872---5860-9999788999999999986499542268998
Q ss_pred EECCCC
Q ss_conf 977887
Q gi|254780569|r 340 TQRSEK 345 (357)
Q Consensus 340 ~~~~~~ 345 (357)
T Consensus 309 ~~~~~~ 314 (339)
T COG0309 309 VEEKGG 314 (339)
T ss_pred ECCCCC
T ss_conf 326883