HHsearch alignment for GI: 254780569 and conserved domain: KOG3939
>KOG3939 consensus.
Probab=99.02 E-value=2.1e-08 Score=79.17 Aligned_cols=269 Identities=19% Similarity=0.244 Sum_probs=148.1
Q ss_pred CCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH-HHHHHHCCCC-H-HH---HHHHHHHHHHHHH
Q ss_conf 871899956888789999998288550168888854346788541122-1100000332-0-37---8999999999999
Q gi|254780569|r 59 VDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPL-FFLDYLATSQ-L-NP---DQATSIIKGIAAG 132 (357)
Q Consensus 59 ~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl-~fldyia~~~-l-~~---~~~~~ii~gi~~~ 132 (357)
T Consensus 11 ~gl~lvqttdffyp~vddpy~m------griacanvlsdlyamgvtecdnmlmll~vs~~~~ekerd~v~pl~~~gfkda 84 (312)
T KOG3939 11 GGLLLVQTTDFFYPLVDDPYMM------GRIACANVLSDLYAMGVTECDNMLMLLSVSTSMSEKERDVVIPLIIQGFKDA 84 (312)
T ss_pred CCEEEEEEECEEEECCCCHHHH------HHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHCHHHHHHHHHHHHH
T ss_conf 9768998503044525786776------5789988888888725321052302224411102565332068888876778
Q ss_pred HHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHH-HHHHCCCC
Q ss_conf 98609522143010000013655663368999974154211333455524899953865543232034444-55311554
Q gi|254780569|r 133 CCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSGLHSNGFALVRKI-ISLSQLSW 211 (357)
Q Consensus 133 c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRki-l~~~~~~~ 211 (357)
T Consensus 85 a~e~gt~v~ggqtv~npw~------~igGVatsVcq~ne~i~pdnAvpGdvlvLTkplg~q---vAv~~h~wi~~~~ek~ 155 (312)
T KOG3939 85 AEEAGTPVTGGQTVINPWC------IIGGVATSVCQPNEIIMPDNAVPGDVLVLTKPLGGQ---VAVNAHQWIDNQPEKW 155 (312)
T ss_pred HHHCCCCEECCEEECCCCE------EECCCCCCCCCCCCEECCCCCCCCCEEEEECCCCCE---EEHHHHHHHHCCCCEE
T ss_conf 9735984466705417403------445541233374310055677776369993267752---1127988876175101
Q ss_pred CCCCCCCC----CCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHH---CCCCCCCCCEEEEECCCCCCCCH
Q ss_conf 56676666----630668753972012268888763046322223454201220---12002544304787100489867
Q gi|254780569|r 212 KDPSPISS----EHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTE---NIPRAIPAHLTASINLNSVEVPQ 284 (357)
Q Consensus 212 ~~~~~~~~----~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~---nL~RiLp~gl~a~Id~~~~p~p~ 284 (357)
T Consensus 156 ~~~~l~vs~~die~ay~~a~~~M~--~Lnr~aA~lmhkynaHaaTDItGFgllGHaqnLa~qqk~~v~f~i~--~LPiI~ 231 (312)
T KOG3939 156 NKLKLEVSDEDIEKAYEEAMKSMA--RLNRNAAGLMHKYNAHAATDITGFGLLGHAQNLAKQQKNEVSFQIH--KLPIIA 231 (312)
T ss_pred EEEEEEECHHHHHHHHHHHHHHHH--HHCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCEEEEC--CCHHHH
T ss_conf 124555258889999999974564--3044665432110223222423311134577899986246302102--570566
Q ss_pred HHHHHHHHCCCCHHHHHHHH------CCCCCEEEEECHHHHHHHHHHHHHC--CC-CEEEEEEEEECCCCCCEEEEE
Q ss_conf 99999996698988987652------4671169998689899999999977--99-808999999778872008996
Q gi|254780569|r 285 IISWLSKKAHVKPAEVLRTF------NCGIGMVIIVHPDNKDCIIKKFQEN--NE-NIILIGEVTQRSEKSPPILYQ 352 (357)
Q Consensus 285 iF~~I~~~g~I~~~EM~rtF------NmGiGmvlvV~~e~a~~v~~~l~~~--g~-~a~iIG~V~~~~~~~~~V~~~ 352 (357)
T Consensus 232 km~~vska~G----~~f~l~qGts~ETsG-GlLIclP~eqaakfcaei~s~k~gegqAWIIGiVekgn-~tArIidk 302 (312)
T KOG3939 232 KMAEVSKACG----NMFKLRQGTSAETSG-GLLICLPREQAAKFCAEIKSPKNGEGQAWIIGIVEKGN-STARIIDK 302 (312)
T ss_pred HHHHHHHHCC----CCCEECCCCCCCCCC-CEEEECCHHHHHHHHHHHCCCCCCCCCEEEEEEEECCC-CCEEECCC
T ss_conf 5889987526----420001477766778-55997358899999987458766887347999985487-41373177