HHsearch alignment for GI: 254780569 and conserved domain: cd00396
>cd00396 PurM-like AIR (aminoimidazole ribonucleotide) synthase related protein. This family includes Hydrogen expression/formation protein HypE, AIR synthases, FGAM (formylglycinamidine ribonucleotide) synthase and Selenophosphate synthetase (SelD). The N-terminal domain of AIR synthase forms the dimer interface of the protein, and is suggested as a putative ATP binding domain.
Probab=100.00 E-value=1.3e-42 Score=318.74 Aligned_cols=219 Identities=29% Similarity=0.508 Sum_probs=196.8
Q ss_pred EEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC-HHHHHHHHHHHHHHHHHHHCCCEEC
Q ss_conf 999568887899999982885501688888543467885411221100000332-0378999999999999986095221
Q gi|254780569|r 63 LVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQ-LNPDQATSIIKGIAAGCCQAGCALI 141 (357)
Q Consensus 63 Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~-l~~~~~~~ii~gi~~~c~~~g~~li 141 (357)
T Consensus 2 l~~~tDg~~~~~~~-----dP~~~G~~av~~~~sDi~a~Ga~P~~~l~~l~~~~~~~~~~l~~i~~Gi~~~~~~~gv~iv 76 (222)
T cd00396 2 LAMSTDGINPPLAI-----NPWAGGRLAVGGAVNDIAAMGARPIALLASLSLSNGLEVDILEDVVDGVAEACNQLGVPIV 76 (222)
T ss_pred EEEEECCCCCCCCC-----CHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCEE
T ss_conf 59996688994001-----8888999999999888987599859999988834899878999999999999999698268
Q ss_pred CCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 43010000013655663368999974154211333455524899953865543232034444553115545667666663
Q gi|254780569|r 142 GGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEH 221 (357)
Q Consensus 142 GGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~ 221 (357)
T Consensus 77 GG~t~~~~~~~~-~~~~~~~~~~G~~~~~~~~~~~~a~~GD~ii~~g--------~------------------------ 123 (222)
T cd00396 77 GGHTSVSPGTMG-HKLSLAVFAIGVVEKDRVIDSSGARPGDVLILTG--------V------------------------ 123 (222)
T ss_pred EEEEEECCCCCC-CCEEEEEEEEEEECCCCEECCCCCCCCCEEEEEC--------H------------------------
T ss_conf 135897588875-4617999999875565400656799999999989--------4------------------------
Q ss_pred CHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCCC-CCEEEEECCCCCCCCHHHHHHHHHCCCCHHHH
Q ss_conf 06687539720122688887630463222234542012201200254-43047871004898679999999669898898
Q gi|254780569|r 222 SLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAIP-AHLTASINLNSVEVPQIISWLSKKAHVKPAEV 300 (357)
Q Consensus 222 tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiLp-~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM 300 (357)
T Consensus 124 --------------~~~~~l~~~-~~v~a~~DiT~GGL~~~l~e~a~~s~~g~~i~~~~ip~~~~~~~~~~~----~~~~ 184 (222)
T cd00396 124 --------------DAVLELVAA-GDVHAMHDITDGGLLGTLPELAQASGVGAEIDLEAIPLDEVVRWLCVE----HIEE 184 (222)
T ss_pred --------------HHHHHHHHC-CCEEEEEECCCCHHHHHHHHHHHHCCCEEEEEHHHCCCCHHHHHHHHH----CHHH
T ss_conf --------------999987645-885699867987499999999987697699977657988789988550----3599
Q ss_pred HHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 76524671169998689899999999977998089999
Q gi|254780569|r 301 LRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILIGE 338 (357)
Q Consensus 301 ~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iIG~ 338 (357)
T Consensus 185 ~~~~~~~g~lli~v~~e~~~~v~~~l~~~gi~a~vIGr 222 (222)
T cd00396 185 ALLFNSSGGLLIAVPAEEADAVLLLLNGNGIDAAVIGR 222 (222)
T ss_pred HHHHCCCCEEEEEECHHHHHHHHHHHHHCCCCEEECCC
T ss_conf 97522548699999789999999999966999797192