HHsearch alignment for GI: 254780569 and conserved domain: cd02193
>cd02193 PurL Formylglycinamide ribonucleotide amidotransferase (FGAR-AT) catalyzes the ATP-dependent conversion of formylglycinamide ribonucleotide (FGAR) and glutamine to formylglycinamidine ribonucleotide (FGAM), ADP, phosphate, and glutamate in the fourth step of the purine biosynthetic pathway. In eukaryotes and Gram-negative bacteria, FGAR-AT is encoded by the purL gene as a multidomain protein with a molecular mass of about 140 kDa. In Gram-positive bacteria and archaea FGAR-AT is a complex of three proteins: PurS, PurL, and PurQ. PurL itself contains two tandem N- and C-terminal domains (four domains altogether). The N-terminal domains bind ATP and are related to the ATP-binding domains of HypE, ThiL, SelD and PurM.
Probab=99.65 E-value=5.2e-15 Score=125.45 Aligned_cols=222 Identities=21% Similarity=0.264 Sum_probs=151.0
Q ss_pred HHHHHHHHHHHHHHHH--HHHHHHHHHHCCCCHHH---HHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCC-----
Q ss_conf 6888885434678854--11221100000332037---8999999999999986095221430100000136556-----
Q gi|254780569|r 87 GIDLVAMCVNDILTHG--AEPLFFLDYLATSQLNP---DQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRD----- 156 (357)
Q Consensus 87 g~Dlvam~vNDi~~~G--A~Pl~fldyia~~~l~~---~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~----- 156 (357)
T Consensus 22 a~~av~Ea~RNi~~~G~~a~pia~~dn~~~~~~~p~~~~~l~~av~Gi~d~c~~l~iPvvsGnv----Slyn~~~~~~~~ 97 (272)
T cd02193 22 AATGVGGAIRDIAATGIDAKPIALSANWMASAGHPGEDAILYDAVKGVAELCNQLGLPIPVGKD----RMSMKTRWQEGN 97 (272)
T ss_pred HHHHHHHHHHCCHHCCCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCEECCCC----CEECEEECCCCC
T ss_conf 9999999997605108887225898503668979318899999999999998862988505623----130004425788
Q ss_pred --------CCEEEEEEEEECCCCCCCCCCCCCCEEEEEEC--C--CCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHH
Q ss_conf --------63368999974154211333455524899953--8--65543232034444553115545667666663066
Q gi|254780569|r 157 --------YDLAGFAVGAVERKELLSPENVCAGDLILGLP--S--SGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLG 224 (357)
Q Consensus 157 --------~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~--S--sG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~ 224 (357)
T Consensus 98 ~~~~~~~~Pt~~i~~vG~i~d~~~~~~~~~~~g~~i~liG~~~~~~~lg--Gs~~~~~~~~~~~~g--~~~~~~~d--~~ 171 (272)
T cd02193 98 EQREMTHPPSLVISAFGRVRDDRHTLPQLSTEGNALLLIGGGKGHNGLG--GTALASVALSYRQLG--DKSAQVRD--PA 171 (272)
T ss_pred CCEEEEEEEEEEEEEEECCCCCCEECCCCCCCCCEEEEEECCCCCCCCC--HHHHHHHHHCCCCCC--CCCCCCCC--HH
T ss_conf 3016887124776675203564044477778999899991578878753--268999874024379--99998689--99
Q ss_pred HHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC-CCCEEEEECCCCCCCC-----HHHHHHHHHCCCCHH
Q ss_conf 8753972012268888763046322223454201220120025-4430478710048986-----799999996698988
Q gi|254780569|r 225 ETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAI-PAHLTASINLNSVEVP-----QIISWLSKKAHVKPA 298 (357)
Q Consensus 225 e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiL-p~gl~a~Id~~~~p~p-----~iF~~I~~~g~I~~~ 298 (357)
T Consensus 172 ~e----k~~-~~~~~~~i~~-glI~s~HDvS~GGL~vaLaEma~~g~~G~~idL~~v~~~~~~~~~~~~lfsE------- 238 (272)
T cd02193 172 QE----KGF-YEAMQALVAA-GKLLAWHDRGAGGLLVALAELVFAGHCGVQVDLAALGDDEPDMEPLEIALFE------- 238 (272)
T ss_pred HH----HHH-HHHHHHHHHC-CCCEEEEECCCCHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCHHHHHHHC-------
T ss_conf 99----999-9999999983-9944886658860888899998547964999805675889998789998716-------
Q ss_pred HHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEE
Q ss_conf 9876524671169998689899999999977998089999
Q gi|254780569|r 299 EVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILIGE 338 (357)
Q Consensus 299 EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iIG~ 338 (357)
T Consensus 239 -------sq~R~vv~V~~e~~~~~~~i~~~~~~~~~viG~ 271 (272)
T cd02193 239 -------SQERGVIQVRAEDRDAVEEAQYGLADCVHVLGQ 271 (272)
T ss_pred -------HHHCEEEEECHHHHHHHHHHHCCCCCCEEEECC
T ss_conf -------735829998676599999996168983488257