HHsearch alignment for GI: 254780569 and conserved domain: cd02195
>cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.
Probab=99.97 E-value=9.8e-31 Score=235.59 Aligned_cols=262 Identities=20% Similarity=0.268 Sum_probs=191.5
Q ss_pred HHHHHHHHHHHHCCCCCC--CCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 999999998862673543--667773157565544688718999568887899999982885501688888543467885
Q gi|254780569|r 24 TVTQIKSAVKSTKRAGTI--GEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTH 101 (357)
Q Consensus 24 ~v~~i~~~~~~t~~~~v~--~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~ 101 (357)
T Consensus 19 L~~~l~~~~-~~~~~~vlvg~~~gdDaAvi~~~~----~~~lv~t~D~f------~~~v~dp~~~G~~Av~~alsDiaam 87 (287)
T cd02195 19 LSQLLAGLP-LPTDPNLLVGLGTGDDAAVYRLPG----GLALVQTTDFF------PPIVDDPYLFGRIAAANALSDIYAM 87 (287)
T ss_pred HHHHHHHCC-CCCCCCCCCCCCCCCCEEEEEECC----CEEEEEECCCC------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf 999997377-878955023899877548997189----81899975787------7766598999999999866469884
Q ss_pred HHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
Q ss_conf 411221100000332----0378999999999999986095221430100000136556633689999741542113334
Q gi|254780569|r 102 GAEPLFFLDYLATSQ----LNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPEN 177 (357)
Q Consensus 102 GA~Pl~fldyia~~~----l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~ 177 (357)
T Consensus 88 Ga~P~~~l~~l~lP~~~~~~~~~~l~~i~~Gi~~~~~~~gv~ivGGhT~~~~~------~~i~~tv~G~~~~~~~i~~~~ 161 (287)
T cd02195 88 GAKPLSALAIVTLPRKLPALQEEVLREILAGGKDKLREAGAVLVGGHTIEGPE------PKYGLSVTGLVHPNKILRNSG 161 (287)
T ss_pred CCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEECCCC------CEEEEEEEEEECCCCCEECCC
T ss_conf 58769999880277777511299999999999999998299577553320888------668888998875776254268
Q ss_pred CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf 55524899953865543232034444553115545667666663066875397201226888876304632222345420
Q gi|254780569|r 178 VCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGG 257 (357)
Q Consensus 178 i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGG 257 (357)
T Consensus 162 ak~GD~IivTk~lG~---g~~~~a~--~~---~~~---~~~~~~~~~~~~~~~~~----~~~~l~~~-~~v~Am~DiT~g 225 (287)
T cd02195 162 AKPGDVLILTKPLGT---GILFAAE--MA---GLA---RGEDIDAALESMARLNR----AAAELLRK-YGAHACTDVTGF 225 (287)
T ss_pred CCCCCEEEEECCCCH---HHHHHHH--HC---CCC---CHHHHHHHHHHHHHHHH----HHHHHHHH-CCCCEEECCCCC
T ss_conf 999999999578758---9999998--72---667---86889999999853139----99999865-587333236554
Q ss_pred HHHHCCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEE
Q ss_conf 1220120025-443047871004898679999999669898898765246711699986898999999999779980899
Q gi|254780569|r 258 GLTENIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILI 336 (357)
Q Consensus 258 Gl~~nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iI 336 (357)
T Consensus 226 GL~g~L~ema~aSgvg~~i~~~~IPv~------q--------------tsG-~ll~~v~~~~a~~~~~~l~~~g~~a~iI 284 (287)
T cd02195 226 GLLGHLLEMARASGVSAEIDLDKLPLL------Q--------------TSG-GLLAAVPPEDAAALLALLKAGGPPAAII 284 (287)
T ss_pred HHHHHHHHHHHHCCCEEEEEECCCCEE------E--------------ECC-CEEEEECHHHHHHHHHHHHHCCCCEEEE
T ss_conf 789999999997799099970448779------7--------------158-2599986899999999999669984999
Q ss_pred EEE
Q ss_conf 999
Q gi|254780569|r 337 GEV 339 (357)
Q Consensus 337 G~V 339 (357)
T Consensus 285 G~V 287 (287)
T cd02195 285 GEV 287 (287)
T ss_pred EEC
T ss_conf 779