HHsearch alignment for GI: 254780569 and conserved domain: cd02195

>cd02195 SelD Selenophosphate synthetase (SelD) catalyzes the conversion of selenium to selenophosphate which is required by a number of bacterial, archaeal and eukaryotic organisms for synthesis of Secys-tRNA, the precursor of selenocysteine in selenoenzymes. The N-terminal domain of SelD is related to the ATP-binding domains of hydrogen expression/formation protein HypE, the AIR synthases, and FGAM synthase and is thought to bind ATP.
Probab=99.97  E-value=9.8e-31  Score=235.59  Aligned_cols=262  Identities=20%  Similarity=0.268  Sum_probs=191.5

Q ss_pred             HHHHHHHHHHHHCCCCCC--CCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             999999998862673543--667773157565544688718999568887899999982885501688888543467885
Q gi|254780569|r   24 TVTQIKSAVKSTKRAGTI--GEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTH  101 (357)
Q Consensus        24 ~v~~i~~~~~~t~~~~v~--~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~  101 (357)
T Consensus        19 L~~~l~~~~-~~~~~~vlvg~~~gdDaAvi~~~~----~~~lv~t~D~f------~~~v~dp~~~G~~Av~~alsDiaam   87 (287)
T cd02195          19 LSQLLAGLP-LPTDPNLLVGLGTGDDAAVYRLPG----GLALVQTTDFF------PPIVDDPYLFGRIAAANALSDIYAM   87 (287)
T ss_pred             HHHHHHHCC-CCCCCCCCCCCCCCCCEEEEEECC----CEEEEEECCCC------CCCCCCHHHHHHHHHHHHHHHHHHH
T ss_conf             999997377-878955023899877548997189----81899975787------7766598999999999866469884


Q ss_pred             HHHHHHHHHHHCCCC----HHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCC
Q ss_conf             411221100000332----0378999999999999986095221430100000136556633689999741542113334
Q gi|254780569|r  102 GAEPLFFLDYLATSQ----LNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPEN  177 (357)
Q Consensus       102 GA~Pl~fldyia~~~----l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~  177 (357)
T Consensus        88 Ga~P~~~l~~l~lP~~~~~~~~~~l~~i~~Gi~~~~~~~gv~ivGGhT~~~~~------~~i~~tv~G~~~~~~~i~~~~  161 (287)
T cd02195          88 GAKPLSALAIVTLPRKLPALQEEVLREILAGGKDKLREAGAVLVGGHTIEGPE------PKYGLSVTGLVHPNKILRNSG  161 (287)
T ss_pred             CCCHHHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEECCCEECCCC------CEEEEEEEEEECCCCCEECCC
T ss_conf             58769999880277777511299999999999999998299577553320888------668888998875776254268


Q ss_pred             CCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCC
Q ss_conf             55524899953865543232034444553115545667666663066875397201226888876304632222345420
Q gi|254780569|r  178 VCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGG  257 (357)
Q Consensus       178 i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGG  257 (357)
T Consensus       162 ak~GD~IivTk~lG~---g~~~~a~--~~---~~~---~~~~~~~~~~~~~~~~~----~~~~l~~~-~~v~Am~DiT~g  225 (287)
T cd02195         162 AKPGDVLILTKPLGT---GILFAAE--MA---GLA---RGEDIDAALESMARLNR----AAAELLRK-YGAHACTDVTGF  225 (287)
T ss_pred             CCCCCEEEEECCCCH---HHHHHHH--HC---CCC---CHHHHHHHHHHHHHHHH----HHHHHHHH-CCCCEEECCCCC
T ss_conf             999999999578758---9999998--72---667---86889999999853139----99999865-587333236554


Q ss_pred             HHHHCCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEE
Q ss_conf             1220120025-443047871004898679999999669898898765246711699986898999999999779980899
Q gi|254780569|r  258 GLTENIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILI  336 (357)
Q Consensus       258 Gl~~nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iI  336 (357)
T Consensus       226 GL~g~L~ema~aSgvg~~i~~~~IPv~------q--------------tsG-~ll~~v~~~~a~~~~~~l~~~g~~a~iI  284 (287)
T cd02195         226 GLLGHLLEMARASGVSAEIDLDKLPLL------Q--------------TSG-GLLAAVPPEDAAALLALLKAGGPPAAII  284 (287)
T ss_pred             HHHHHHHHHHHHCCCEEEEEECCCCEE------E--------------ECC-CEEEEECHHHHHHHHHHHHHCCCCEEEE
T ss_conf             789999999997799099970448779------7--------------158-2599986899999999999669984999


Q ss_pred             EEE
Q ss_conf             999
Q gi|254780569|r  337 GEV  339 (357)
Q Consensus       337 G~V  339 (357)
T Consensus       285 G~V  287 (287)
T cd02195         285 GEV  287 (287)
T ss_pred             EEC
T ss_conf             779