HHsearch results for GI: 254780569 and protein with PDBid: 3mcq_A
>3mcq_A Thiamine-monophosphate kinase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE PGE PG4 1PE; 1.91A {Methylobacillus flagellatus}
Probab=100.00 E-value=2.9e-35 Score=265.82 Aligned_cols=279 Identities=19% Similarity=0.201 Sum_probs=218.9
Q ss_pred CCCCCCCCCCCCEEEEECCCCCCCCEEEEEECCCC--CHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHC
Q ss_conf 67354366777315756554468871899956888--7899999982885501688888543467885411221100000
Q gi|254780569|r 36 KRAGTIGEIGGFGGLFDLKKAGFVDPILVSSSDGV--GTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLA 113 (357)
Q Consensus 36 ~~~~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGV--GTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia 113 (357)
.+|.++-++|..|++++++. +..||.+||+. |+.- .. ......+|+.+|++|+|||+||||+|++++++++
T Consensus 16 ~~~~~~~G~GDDaavi~~~~----~~~lv~t~D~~~e~~hf--~~-~~~p~~~G~~av~~~~sDi~amGa~P~~~~~~l~ 88 (319)
T 3mcq_A 16 AHPSAVLGVGDDAALIQPSP----GMELAVSADMLVANTHF--YP-NIDPWLIGWKSLAVNISDMAAMGAQPRWATLTIA 88 (319)
T ss_dssp CEECTTTCCCGGGGCCCCCT----TCEEEEEEEEEECCTTS--CC-CSCHHHHHHHHHHHHHHHHHHTTCEEEEEEEEEE
T ss_pred CCCCCCCCCCCCEEEEECCC----CCEEEEEECCCCCCCCC--CC-CCCHHHHHHHHHHHHHHHHHHCCCCCCEEEECCC
T ss_conf 19986448998889985289----96799992555456677--99-9999999999999989999874698826531146
Q ss_pred CCCHHHHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCC
Q ss_conf 33203789999999999999860952214301000001365566336899997415421133345552489995386554
Q gi|254780569|r 114 TSQLNPDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLSPENVCAGDLILGLPSSGLH 193 (357)
Q Consensus 114 ~~~l~~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~~~~i~~GD~IIgl~SsG~H 193 (357)
+++.+++.++++++||.++|++.||+++||||.. +...++.+++|.+++++++..+++++||.|+...+.|.|
T Consensus 89 ~p~~~~~~l~~i~~Gi~~a~~~~gv~lvGGdt~~-------~~~~~~~~~~g~~~~~~~~~r~~a~~GD~i~vt~~~G~~ 161 (319)
T 3mcq_A 89 LPEADEDWISKFAAGFFACAAQFDIALIGGDTTR-------GPLTISVQIMGETPPGASLLRSTARADDDIWVSGPLGDA 161 (319)
T ss_dssp ESSCCHHHHHHHHHHHHHHHHHTTCEEEEEEEEE-------SSCEEEEEEEEEECTTCCCCSSCCCTTEEEEECSCCSHH
T ss_pred CCCCCHHHHHHHHHHHHHHCCCCCEEEECCCCCC-------CCCEEEEEEEECCCCCCEEEHHHCCCCCEEEEEECCCCC
T ss_conf 7878999999998899987144878996677447-------863488888621468724550122337728997257864
Q ss_pred CCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCCCCCCHHHHCCCCCC-CCCEE
Q ss_conf 32320344445531155456676666630668753972012268888763046322223454201220120025-44304
Q gi|254780569|r 194 SNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALAHITGGGLTENIPRAI-PAHLT 272 (357)
Q Consensus 194 sNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~ahITGGGl~~nL~RiL-p~gl~ 272 (357)
.+|+++.|+....... ......+..+.|.... . +...+. ..+++|.++|.|++ ..|.++. .++++
T Consensus 162 ~~g~~~~~~~~~~~~~---------~~~~~~~~~~~p~~~~-~-~~~~l~--~~~~~~~DisdGl~-~~l~~l~~~s~~g 227 (319)
T 3mcq_A 162 ALALAAIQGRYPLSDT---------ELAACGKALHQPQPRV-V-LGQALR--GLAHSALDISDGLL-ADLGHILEHSQVG 227 (319)
T ss_dssp HHHHHHHTTSSCCCHH---------HHHHHHHHHHCCCCCH-H-HHHHTT--TTEEEEEECSSCHH-HHHHHHHHHHTCE
T ss_pred CHHHHHHHCCCCCCCC---------HHHHHHHHCCCCCHHH-H-HHHHHH--HHHHHHCCCCCCHH-HHHHHHHHHCCCC
T ss_conf 1013455233334530---------1234444202855689-9-987777--66665102232238-8876667634665
Q ss_pred EEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHCCCCEEEEEEEEECCC
Q ss_conf 787100489867999999966989889876524671169998689899999999977998089999997788
Q gi|254780569|r 273 ASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQENNENIILIGEVTQRSE 344 (357)
Q Consensus 273 a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~g~~a~iIG~V~~~~~ 344 (357)
++|+.+++|+++.+...++. ....+++..+.+..+|+++++|+++++++++++++++++++||+|+++++
T Consensus 228 ~~I~~~~ip~~~~~~~~~~~--~~~~~~~~~~gedy~ll~tv~~~~~~~~~~~~~~~gi~~~~IG~vt~~~~ 297 (319)
T 3mcq_A 228 AEVWLKAIPKSEVVSAHSQE--VAIQKMILSGGDDYELCFTASTQHRQQIADIGRQLSLDMAVIGRITDTQQ 297 (319)
T ss_dssp EEEEGGGSCCCHHHHHTTTS--HHHHHHHHHCSCCCCEEEEEEGGGHHHHHHHHHHTTCCCEEEEEEESSCC
T ss_pred CCCCHHHCCCCHHHHHHHHH--HCCHHHEEECCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEEEEECCCC
T ss_conf 30049767798789888764--20044310079966899996699999999999874989699999987986