HHSEARCH alignment of GI: 254780569 and SCOP domain: d1vk3a1

Alignment
>d1vk3a1 d.79.4.1 (A:2-166) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]}
Probab=97.64  E-value=3.3e-05  Score=53.57  Aligned_cols=121  Identities=22%  Similarity=0.240  Sum_probs=81.0

Q ss_pred             CCCCCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHH
Q ss_conf             54366777315756554468871899956888789999998288550168888854346788541122110000033203
Q gi|254780569|r   39 GTIGEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQLN  118 (357)
Q Consensus        39 ~v~~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~l~  118 (357)
                      ......+.=|++.+++.    +-.++...+.=-.-..    .+-|.. +.-.|+=++-|++++||+|++.+|-+-...+ 
T Consensus        44 ~~~~~~~dNAgVi~~~~----~~~i~~k~ETHNhPta----i~Pf~G-AaTgvgG~iRD~~~~Ga~p~a~~~~L~~~~i-  113 (165)
T d1vk3a1          44 LPKTGFEGNAGVVNLDD----YYSVAFKIESHNHPSA----IEPYNG-AATGVGGIIRDVLAMGARPTAIFDSLHMSRI-  113 (165)
T ss_dssp             SCBCTTSSSTTEEESSS----SEEEEEEEEECHHHHH----HCHHHH-HHHHHHHHHHHHHHTTCEEEEEEEEEEESSC-
T ss_pred             CCCCCCCCCCCEEECCC----CCCEEEEEECCCCEEE----ECCCCC-CCCHHHHHHHCCCCCCCCCCCCCCCCCHHHH-
T ss_conf             85001367740651156----6405678832783420----358775-3411345542542334556013477311223-


Q ss_pred             HHHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCC
Q ss_conf             78999999999999986095221430100000136556633689999741542113
Q gi|254780569|r  119 PDQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDRDYDLAGFAVGAVERKELLS  174 (357)
Q Consensus       119 ~~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~~~Dlag~~vG~v~k~~ii~  174 (357)
                         +.++++|++++|.+.|+|.++|..--.. .|..+..-.+| ++|++++++++.
T Consensus       114 ---~~~~v~G~a~ygN~~G~P~v~G~v~~~~-~~~~~Pi~~~g-~vG~i~~d~iv~  164 (165)
T d1vk3a1         114 ---IDGIIEGIADYGNSIGVPTVGGELRISS-LYAHNPLVNVL-AAGVVRNDMLVD  164 (165)
T ss_dssp             ---CHHHHHHHHHHHHHHTCCEEEEEEEECG-GGTTCCEEEEE-EEEEEETTSCCC
T ss_pred             ---HHHCCHHHHHHHHHHCCCCCCEEEEEEC-CCCCCCEEEEE-EEEECCCCCCCC
T ss_conf             ---2220223999987409873331599916-44999758970-587337653055


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: PurM N-terminal domain-like
family: PurM N-terminal domain-like
domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3
species: Thermotoga maritima [TaxId: 2336]