HHSEARCH alignment of GI: 254780569 and SCOP domain: d1vk3a2

Alignment
>d1vk3a2 d.79.4.1 (A:346-507) Phosphoribosylformylglycinamidine synthase II, domains 1 and 3 {Thermotoga maritima [TaxId: 2336]}
Probab=98.67  E-value=3.3e-08  Score=74.63  Aligned_cols=118  Identities=17%  Similarity=0.187  Sum_probs=84.4

Q ss_pred             CCCCCCEEEEECCCCCCCCEEEEEECCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCH--HH
Q ss_conf             6677731575655446887189995688878999999828855016888885434678854112211000003320--37
Q gi|254780569|r   42 GEIGGFGGLFDLKKAGFVDPILVSSSDGVGTKLKIAIETGKNDTIGIDLVAMCVNDILTHGAEPLFFLDYLATSQL--NP  119 (357)
Q Consensus        42 ~~ig~f~~~~~l~~~~~~~p~Lv~~tDGVGTK~~ia~~~~~~~~ig~Dlvam~vNDi~~~GA~Pl~fldyia~~~l--~~  119 (357)
                      -+-|+-|+++++..    +--++.++|.-.....+    +-|. -+.-.|+-++.|++|+||+|++++|.+.++..  ++
T Consensus        38 ~~Pg~daaVv~i~~----~~~~ais~~~~~~~~~~----dPy~-Ga~~aV~Eavrnl~a~GA~P~ai~d~LnFg~Pe~~~  108 (162)
T d1vk3a2          38 VPPGFGAAVMRIKR----DGGYSLVTHSRADLALQ----DTYW-GTLIAVLESVRKTLSVGAEPLAITNCVNYGDPDVDP  108 (162)
T ss_dssp             SCGGGSCEEEEEET----TEEEEEEEECCHHHHTT----CHHH-HHHHHHHHHHHHHHHTTCEEEEEEEEEECSCTTTCH
T ss_pred             CCCCCCCCEEEECC----CCCEEEEECCCCCHHHH----HHHH-HHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCH
T ss_conf             47899861688757----87238884157612211----1788-877899999987551351678878765268889988


Q ss_pred             HHHHHHHHHHHHHHHHCCCEECCCCHHHCCCCCCCC---CC--CEEEEEEEEECCCCC
Q ss_conf             899999999999998609522143010000013655---66--336899997415421
Q gi|254780569|r  120 DQATSIIKGIAAGCCQAGCALIGGETAEMPGLYHDR---DY--DLAGFAVGAVERKEL  172 (357)
Q Consensus       120 ~~~~~ii~gi~~~c~~~g~~liGGETAemP~vy~~~---~~--Dlag~~vG~v~k~~i  172 (357)
                      ..+.+.++|+.++|+..+++++||.-    .+|.+.   ..  .+.-.++|+++++++
T Consensus       109 ~~~~~~v~gl~~~~~~~~iPvVgGnv----SlyN~~~~~~I~PTp~i~~~G~v~~~ki  162 (162)
T d1vk3a2         109 VGLSAMMTALKNACEFSGVPVASGNA----SLYNTYQGKPIPPTLVVGMLGKVNPQKV  162 (162)
T ss_dssp             HHHHHHHHHHHHHHHHHTCCEEEEEE----ECCCEETTEECCCEEEEEEEEEECGGGC
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCCCEE----EECCCCCCCCCCCCCEEEEEEEECCCCC
T ss_conf             99999999999999980998215544----5405768986898667999885215759


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: Bacillus chorismate mutase-like
superfamily: PurM N-terminal domain-like
family: PurM N-terminal domain-like
domain: Phosphoribosylformylglycinamidine synthase II, domains 1 and 3
species: Thermotoga maritima [TaxId: 2336]