HHSEARCH alignment of GI: 254780569 and SCOP domain: d2z1ea2

Alignment
>d2z1ea2 d.139.1.1 (A:156-334) Hydrogenase expression/formation protein HypE {Thermococcus kodakaraensis [TaxId: 311400]}
Probab=99.61  E-value=2e-15  Score=125.12  Aligned_cols=160  Identities=18%  Similarity=0.249  Sum_probs=120.7

Q ss_pred             CCCCCCCCCEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHCCCCCCCCC
Q ss_conf             13334555248999538655432320344445531155456676666630668753972012268888763046322223
Q gi|254780569|r  173 LSPENVCAGDLILGLPSSGLHSNGFALVRKIISLSQLSWKDPSPISSEHSLGETLLTPTRIYVSPLLKILRKTGKIKALA  252 (357)
Q Consensus       173 i~~~~i~~GD~IIgl~SsG~HsNGySLvRkil~~~~~~~~~~~~~~~~~tl~e~LL~PtriY~~~i~~ll~~~~~i~~~a  252 (357)
                      |+.+.+||||.|+.....|.|..|+.+.++-..     ....        + +..++|.+-+.+.+..+.. ...+++|.
T Consensus         1 i~~sgAk~GD~I~vtg~~G~~g~~l~~~~~~~~-----~~~~--------~-~~~~~~~~~~~~~~~~~~~-~~~i~a~~   65 (179)
T d2z1ea2           1 VSDAGAKVGDAVLVSGTIGDHGIALMSHREGIA-----FETE--------L-KSDVAPIWDVVKAVAETIG-WENIHAMK   65 (179)
T ss_dssp             CCTTCCCTTCEEEESSCSSHHHHHHHHHHTTCC-----CSSC--------C-CCCCCCCHHHHHHHHHHHC-GGGEEEEE
T ss_pred             CCCCCCCCCCEEEEECCHHHHHHHHHHHHCCCC-----CCHH--------H-HHHHHHHHHHHHHHHHHHC-CCCCEEEE
T ss_conf             986678707999998835589999999976965-----3034--------7-8888610189999999742-47740776


Q ss_pred             CCCCCHHHHCCCCCC-CCCEEEEECCCCCCCCHHHHHHHHHCCCCHHHHHHHHCCCCCEEEEECHHHHHHHHHHHHHC--
Q ss_conf             454201220120025-44304787100489867999999966989889876524671169998689899999999977--
Q gi|254780569|r  253 HITGGGLTENIPRAI-PAHLTASINLNSVEVPQIISWLSKKAHVKPAEVLRTFNCGIGMVIIVHPDNKDCIIKKFQEN--  329 (357)
Q Consensus       253 hITGGGl~~nL~RiL-p~gl~a~Id~~~~p~p~iF~~I~~~g~I~~~EM~rtFNmGiGmvlvV~~e~a~~v~~~l~~~--  329 (357)
                      |||.|||...|.++. .++++++|+.+.+|+++.+..+++..++++   +..++.| +|+++|+|++++++++.++++  
T Consensus        66 DiSdgGL~~~L~eia~~s~~g~~I~~~~ip~~~~~~~~~~~~~~~~---~~~~~~g-~ll~~v~~~~~~~i~~~l~~~~~  141 (179)
T d2z1ea2          66 DPTRAGLSNALNEIARKSNVGILVREADIPIRPEVRAASEMLGISP---YDVANEG-KVVMVVAREYAEEALEAMRKTEK  141 (179)
T ss_dssp             CCCTTHHHHHHHHHHHHHTCEEEEEGGGSCCCHHHHHHHHHHTCCG---GGSCCSS-CCEEEECGGGHHHHHHHHHTSST
T ss_pred             CCCCCHHHHHHHHHHHHCCCEEEEECCCCCCCHHHHHHHHHHHCCH---HHHCCCC-CEEEEECHHHHHHHHHHHHHCCC
T ss_conf             2666315778888898649839982110105788998777741033---4433463-31357478899999999985778


Q ss_pred             CCCEEEEEEEEECCCCCCEEEEEE
Q ss_conf             998089999997788720089963
Q gi|254780569|r  330 NENIILIGEVTQRSEKSPPILYQG  353 (357)
Q Consensus       330 g~~a~iIG~V~~~~~~~~~V~~~G  353 (357)
                      |.++++||+|++++..  .|++++
T Consensus       142 g~~~~vIG~Vt~~~~~--~v~l~~  163 (179)
T d2z1ea2         142 GRNAAIIGEVIADYRG--KVLLET  163 (179)
T ss_dssp             TTTCEEEEEEESSSTT--CEEEEC
T ss_pred             CCCEEEEEEEECCCCC--EEEEEC
T ss_conf             9896999899728987--899986


SCOP domain information

class: Alpha and beta proteins (a+b)
fold: PurM C-terminal domain-like
superfamily: PurM C-terminal domain-like
family: PurM C-terminal domain-like
domain: Hydrogenase expression/formation protein HypE
species: Thermococcus kodakaraensis [TaxId: 311400]