HHsearch alignment for GI: 254780570 and conserved domain: PRK08300

Probab=97.14  E-value=0.0019  Score=44.45  Aligned_cols=104  Identities=17%  Similarity=0.262  Sum_probs=67.0

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             9866599997698-501899999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
T Consensus         2 ~~k~~vAIiGsGnIGtDLm~--Ki~Rs~--~le~~~~vG~dp~S~GL~rA~~lGv~ts~~------GI----d~ll~~~~   67 (298)
T PRK08300          2 MSKIKVAIIGSGNIGTDLMI--KILRSP--HLEPVAMVGIDPESDGLARARRLGVATTAE------GI----DGLLAHPE   67 (298)
T ss_pred             CCCCEEEEECCCCHHHHHHH--HHHCCC--CEEEEEEEECCCCCHHHHHHHHCCCCCCCC------CH----HHHHHCCC
T ss_conf             87534999888833899999--986577--610699980598984999999849966376------79----99961833


Q ss_pred             CCCCEEEEEE--EEEEECCCHHHHCCCCCEEECCCCCCCCC
Q ss_conf             2343036431--12220572132106654231353223332
Q gi|254780570|r   80 SIQPDLICLA--GYMRLLSRDFVESYKNKILNIHPSLLPLF  118 (205)
Q Consensus        80 ~~~~Dliv~~--g~~~il~~~~l~~~~~~~iN~HpslLP~y  118 (205)
T Consensus        68 ~~~idiVFDATSA~aH~~h~~~l~~~g~~~IDLTPAaiGp~  108 (298)
T PRK08300         68 FDDIDIVFDATSAGAHVENAAKLRELGVRVIDLTPAAIGPY  108 (298)
T ss_pred             CCCCCEEEECCCHHHHHHHHHHHHHCCCEEEECCCCCCCCE
T ss_conf             56878899789806689999999973987996770026987