HHsearch alignment for GI: 254780570 and conserved domain: TIGR00289
>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=93.27 E-value=0.26 Score=29.71 Aligned_cols=142 Identities=18% Similarity=0.210 Sum_probs=82.6
Q ss_pred CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH--------HH-HHHHCCCCEEEEECCCCCCCCCHHHH
Q ss_conf 6599997698-50189999999739998479999976888878--------88-99860895046301323322101243
Q gi|254780570|r 4 KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG--------LV-KARKEKVPTFPIPYKDYISRREHEKA 73 (205)
Q Consensus 4 ~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~--------l~-~a~~~~Ip~~~i~~~~~~~~~~~~~~ 73 (205)
T Consensus 1 MkvAvLySGGKDS~-~ALy~al~eG~eV~~LV~v~seN~eSyMfH~pN~Hl~~l~AEavGiPL~klyt~GeeEk-EV-ed 77 (227)
T TIGR00289 1 MKVAVLYSGGKDSI-LALYKALEEGFEVKYLVGVISENEESYMFHVPNVHLTDLVAEAVGIPLIKLYTSGEEEK-EV-ED 77 (227)
T ss_pred CEEEEEECCCHHHH-HHHHHHHHCCCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCCCCC-HH-HH
T ss_conf 90689851871368-99999986288547851000288986205342578999999761766256302786521-17-66
Q ss_pred HHHHCCCCC---CEEEEEEEEEEECCC----HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEE-CCC
Q ss_conf 210001234---303643112220572----132106654231353223332444212100002465344530331-232
Q gi|254780570|r 74 ILMQLSSIQ---PDLICLAGYMRLLSR----DFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMV-TAN 145 (205)
Q Consensus 74 l~~~l~~~~---~Dliv~~g~~~il~~----~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v-~~~ 145 (205)
T Consensus 78 Lag~l~~lderGvea~~~Ga~~S~YQK~Rid~vCrelGlk------s~APLW~-~dPle~~~~~V~e~F~v~iv~V~A~G 150 (227)
T TIGR00289 78 LAGQLEELDERGVEAVVIGAIESEYQKSRIDKVCRELGLK------SIAPLWH-KDPLEYLLEEVAEKFEVIIVSVSAEG 150 (227)
T ss_pred HHHHHHHHHHCCCCEEEECCEECCHHHHHHHHHHHHHCCH------HCCCCCC-CCHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf 6215544553054547885341011233577887771410------0276013-48179999986233608999998411
Q ss_pred CCC---CCEEEEE
Q ss_conf 186---6267789
Q gi|254780570|r 146 MDE---GPIIAQA 155 (205)
Q Consensus 146 ~D~---G~Ii~q~ 155 (205)
T Consensus 151 LdeswLGrridke 163 (227)
T TIGR00289 151 LDESWLGRRIDKE 163 (227)
T ss_pred CCCCCCCCEECHH
T ss_conf 7822366200666