HHsearch alignment for GI: 254780570 and conserved domain: TIGR00289

>TIGR00289 TIGR00289 conserved hypothetical protein TIGR00289; InterPro: IPR005237 This family of conserved hypothetical proteins has no known function. Homologous proteins related to MJ0570 of Methanococcus jannaschii include both the apparent orthologs in the family, the much longer protein YLR143W from Saccharomyces cerevisiae (Baker's yeast), and second homologous proteins from Archaeoglobus fulgidus and Pyrococcus horikoshii that appear to represent a second orthologous group..
Probab=93.27  E-value=0.26  Score=29.71  Aligned_cols=142  Identities=18%  Similarity=0.210  Sum_probs=82.6

Q ss_pred             CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH--------HH-HHHHCCCCEEEEECCCCCCCCCHHHH
Q ss_conf             6599997698-50189999999739998479999976888878--------88-99860895046301323322101243
Q gi|254780570|r    4 KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG--------LV-KARKEKVPTFPIPYKDYISRREHEKA   73 (205)
Q Consensus         4 ~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~--------l~-~a~~~~Ip~~~i~~~~~~~~~~~~~~   73 (205)
T Consensus         1 MkvAvLySGGKDS~-~ALy~al~eG~eV~~LV~v~seN~eSyMfH~pN~Hl~~l~AEavGiPL~klyt~GeeEk-EV-ed   77 (227)
T TIGR00289         1 MKVAVLYSGGKDSI-LALYKALEEGFEVKYLVGVISENEESYMFHVPNVHLTDLVAEAVGIPLIKLYTSGEEEK-EV-ED   77 (227)
T ss_pred             CEEEEEECCCHHHH-HHHHHHHHCCCCEEEEEEEECCCCCCCEEECHHHHHHHHHHHHCCCCHHHHHCCCCCCC-HH-HH
T ss_conf             90689851871368-99999986288547851000288986205342578999999761766256302786521-17-66


Q ss_pred             HHHHCCCCC---CEEEEEEEEEEECCC----HHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEE-CCC
Q ss_conf             210001234---303643112220572----132106654231353223332444212100002465344530331-232
Q gi|254780570|r   74 ILMQLSSIQ---PDLICLAGYMRLLSR----DFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMV-TAN  145 (205)
Q Consensus        74 l~~~l~~~~---~Dliv~~g~~~il~~----~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v-~~~  145 (205)
T Consensus        78 Lag~l~~lderGvea~~~Ga~~S~YQK~Rid~vCrelGlk------s~APLW~-~dPle~~~~~V~e~F~v~iv~V~A~G  150 (227)
T TIGR00289        78 LAGQLEELDERGVEAVVIGAIESEYQKSRIDKVCRELGLK------SIAPLWH-KDPLEYLLEEVAEKFEVIIVSVSAEG  150 (227)
T ss_pred             HHHHHHHHHHCCCCEEEECCEECCHHHHHHHHHHHHHCCH------HCCCCCC-CCHHHHHHHHHHCCCEEEEEEEEEEC
T ss_conf             6215544553054547885341011233577887771410------0276013-48179999986233608999998411


Q ss_pred             CCC---CCEEEEE
Q ss_conf             186---6267789
Q gi|254780570|r  146 MDE---GPIIAQA  155 (205)
Q Consensus       146 ~D~---G~Ii~q~  155 (205)
T Consensus       151 LdeswLGrridke  163 (227)
T TIGR00289       151 LDESWLGRRIDKE  163 (227)
T ss_pred             CCCCCCCCEECHH
T ss_conf             7822366200666