HHsearch alignment of GI: 254780570 and MMDB domain: 1zgh_A_1-201

>1zgh_A (A:1-201) Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405}
Probab=99.98  E-value=5.5e-33  Score=247.69  Aligned_cols=178  Identities=12%  Similarity=0.197  Sum_probs=155.0

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      .+++.+.|++|+++..++..   +....++..++++++++...+.|++++||++.++.      ..++.++.+.+++++|
T Consensus         8 ~~il~~l~~~~~~l~~vi~~---~~~~~~i~~~~~~~~~~~~~~~a~~~~i~~~~~~~------~~~~~~~~~~l~~~~~   78 (201)
T 1zgh_A            8 HHHSSGLVPRGSQSTSLYKK---AGLXNIIIATTKSWNIKNAQKFKKENESKYNTTII------TNKDELTFEKVKLINP   78 (201)
T ss_dssp             -------------------------CEEEEEECCSHHHHHHHHHHHHHTTTTEEEEEE------CSGGGCCHHHHHHHCC
T ss_pred             CCCCCCCCCCCHHHHHHHHH---HHCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEE------CCCCHHHHHHHHHCCC
T ss_conf             23201302362146667756---50255899955277799999999973045316764------1815888999985499


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |++|++||++++++.++..+  ++||+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|+||.|+.++|+  |
T Consensus        79 Dl~v~~~~~~i~~~~~~~~~--~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~Tih~~~~~iD~G~Ii~q~~~~i~--d  154 (201)
T 1zgh_A           79 EYILFPHWSWIIPKEIFENF--TCVVFHXTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--G  154 (201)
T ss_dssp             SEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--S
T ss_pred             CEEEEECHHHHCCHHHHHCC--CCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCC--C
T ss_conf             99999673322389999429--9857878689867455640365652544332056674035553000210112344--4


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf             9999999999999999999999998695699898
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSND  197 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~  197 (205)
                      |+.+|..|   +++++++++|+.+++|++....+
T Consensus       155 t~~~l~~k---~~~~~~~~~i~~i~~g~~~~~~Q  185 (201)
T 1zgh_A          155 TAEEIFXR---ASKIIFNDXIPELLTKRPVPQKQ  185 (201)
T ss_dssp             CHHHHHHH---HHHHHHHTHHHHHHHHCCCCBCC
T ss_pred             CHHHHHHH---HHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             10356778---99998655223232221112334