HHsearch alignment of GI: 254780570 and MMDB domain: 1zgh_A_1-201
>1zgh_A (A:1-201) Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405}
Probab=99.98 E-value=5.5e-33 Score=247.69 Aligned_cols=178 Identities=12% Similarity=0.197 Sum_probs=155.0
Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf 65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP 83 (205)
Q Consensus 4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~ 83 (205)
.+++.+.|++|+++..++.. +....++..++++++++...+.|++++||++.++. ..++.++.+.+++++|
T Consensus 8 ~~il~~l~~~~~~l~~vi~~---~~~~~~i~~~~~~~~~~~~~~~a~~~~i~~~~~~~------~~~~~~~~~~l~~~~~ 78 (201)
T 1zgh_A 8 HHHSSGLVPRGSQSTSLYKK---AGLXNIIIATTKSWNIKNAQKFKKENESKYNTTII------TNKDELTFEKVKLINP 78 (201)
T ss_dssp -------------------------CEEEEEECCSHHHHHHHHHHHHHTTTTEEEEEE------CSGGGCCHHHHHHHCC
T ss_pred CCCCCCCCCCCHHHHHHHHH---HHCCCEEEEECHHHHHHHHHHHHHHHCCCCEEEEE------CCCCHHHHHHHHHCCC
T ss_conf 23201302362146667756---50255899955277799999999973045316764------1815888999985499
Q ss_pred EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf 03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r 84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD 163 (205)
Q Consensus 84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d 163 (205)
|++|++||++++++.++..+ ++||+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|+||.|+.++|+ |
T Consensus 79 Dl~v~~~~~~i~~~~~~~~~--~~iN~Hps~LP~yRG~~p~~wai~~g~~~~G~Tih~~~~~iD~G~Ii~q~~~~i~--d 154 (201)
T 1zgh_A 79 EYILFPHWSWIIPKEIFENF--TCVVFHXTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--G 154 (201)
T ss_dssp SEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--S
T ss_pred CEEEEECHHHHCCHHHHHCC--CCEEECCCCCCCCCCCCCCCHHHHCCCCCCCCEEEEEECCCCCCCEEEEEECCCC--C
T ss_conf 99999673322389999429--9857878689867455640365652544332056674035553000210112344--4
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECC
Q ss_conf 9999999999999999999999998695699898
Q gi|254780570|r 164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSND 197 (205)
Q Consensus 164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~ 197 (205)
|+.+|..| +++++++++|+.+++|++....+
T Consensus 155 t~~~l~~k---~~~~~~~~~i~~i~~g~~~~~~Q 185 (201)
T 1zgh_A 155 TAEEIFXR---ASKIIFNDXIPELLTKRPVPQKQ 185 (201)
T ss_dssp CHHHHHHH---HHHHHHHTHHHHHHHHCCCCBCC
T ss_pred CHHHHHHH---HHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 10356778---99998655223232221112334