HHsearch results for GI: 254780570 and protein with PDBid: 1zgh_A
>1zgh_A Methionyl-tRNA formyltransferase; southeast collaboratory for structural genomics, PSI, protein structure initiative, secsg; 2.05A {Clostridium thermocellum atcc 27405} SCOP: b.46.1.1 c.65.1.1
Probab=99.92 E-value=7.9e-25 Score=190.36 Aligned_cols=160 Identities=13% Similarity=0.217 Sum_probs=116.5
Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHH---H-HHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf 9850189999999739998479999976888878---8-89986089504630132332210124321000123430364
Q gi|254780570|r 12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQG---L-VKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC 87 (205)
Q Consensus 12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~---l-~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv 87 (205)
.+||++.++++... ....+++.++ ... + +.+++....+...-.. ++ ++...+.++..+||+++
T Consensus 16 ~r~s~~~~~~~k~~------~~~~i~~~~k-~w~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~l~~~~pd~i~ 82 (260)
T 1zgh_A 16 PRGSQSTSLYKKAG------LMNIIIATTK-SWNIKNAQKFKKENESKYNTTIIT---NK---DELTFEKVKLINPEYIL 82 (260)
T ss_dssp --------------------CEEEEEECCS-HHHHHHHHHHHHHTTTTEEEEEEC---SG---GGCCHHHHHHHCCSEEE
T ss_pred CCHHHHHHHHHHCC------CCEEEEEECC-HHHHHHHHHHHHHHCCCCEEEEEC---CC---CHHHHHHHHHCCCCEEE
T ss_conf 52577776987446------4309999331-656899999998614222268861---84---68789999853989999
Q ss_pred EEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCCCHHH
Q ss_conf 31122205721321066542313532233324442121000024653445303312321866267789987189989999
Q gi|254780570|r 88 LAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQDTESS 167 (205)
Q Consensus 88 ~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d~~~~ 167 (205)
++||++|+|+++++.+ ++||+|||+||+|||++|++|++.+|++.+|+|+|+|++++|+|||+.|+++++. +|..+
T Consensus 83 ~~~~~~ii~~~il~~~--~~in~H~s~LP~~rG~~p~~~~i~~~~~~~g~t~~~~~~~iD~G~Ii~q~~i~i~--~~~~~ 158 (260)
T 1zgh_A 83 FPHWSWIIPKEIFENF--TCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFKRDLDLY--GTAEE 158 (260)
T ss_dssp ESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEEEEEECC--SCHHH
T ss_pred EECCCCCCCHHHHHHC--CEEEECCCCCCCCCCCCHHHHHHHCCCCCCCEEEEEECCCCCCCCCEEEEEEEEC--CCHHH
T ss_conf 8270011389999539--9799826737577899988999974555463489973688758998458889865--87146
Q ss_pred HHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 999999999999999999998695
Q gi|254780570|r 168 LSQKVLSAEHLLYPLALKYTILGK 191 (205)
Q Consensus 168 l~~rv~~~E~~l~~~~i~~~~~g~ 191 (205)
+..|... .++...++.+..+.
T Consensus 159 l~~k~~~---~~~~~li~~i~~~~ 179 (260)
T 1zgh_A 159 IFMRASK---IIFNDMIPELLTKR 179 (260)
T ss_dssp HHHHHHH---HHHHTHHHHHHHHC
T ss_pred HHHHHHH---HHHHHHHHHHHCCC
T ss_conf 7899999---99998888875589