HHSEARCH alignment of GI: 254780570 and SCOP domain: d2blna2

Alignment
>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=3.3e-35  Score=260.28  Aligned_cols=180  Identities=23%  Similarity=0.344  Sum_probs=153.1

Q ss_pred             CEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCC-------CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             6599997698-50-189999999739998479999976888-------87888998608950463013233221012432
Q gi|254780570|r    4 KNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSN-------AQGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         4 ~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~d-------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      +|+++|+++. |. +|++|+++      +++|++|+|..++       +...+.|+++|||++....-       .++++
T Consensus         1 Mkiv~~~~~~~g~~~l~~L~~~------g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~-------~~~~~   67 (203)
T d2blna2           1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV-------NHPLW   67 (203)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC-------CSHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEECCCC-------CCHHH
T ss_conf             9399995577899999999978------9988999848999876666587899999859962211212-------10123


Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.+||+++++||++|+|+++++.++.+++|+|||+||+|||.+|++|++.+|++++|+|+|+|++++|+|+|+.|
T Consensus        68 ~~~i~~~~~Dlii~~g~~~ii~~~il~~~~~~~iN~H~slLP~yrG~~p~~wai~~g~~~~G~Tih~i~~~iD~G~Il~q  147 (203)
T d2blna2          68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQ  147 (203)
T ss_dssp             HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE
T ss_pred             HHHHHHHCCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf             44543203351465411100000110123778988755222055443234432303445543204775315777610035


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             998718998999999999999999999999999869569989
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSN  196 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~  196 (205)
                      ++++|.++||..+|++|+..++.+++.++++.+.+|++....
T Consensus       148 ~~~~i~~~~t~~~l~~k~~~~~~~l~~~~l~~i~~g~~~~~~  189 (203)
T d2blna2         148 LRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA  189 (203)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
T ss_conf             343342023589999999999999999999999869985145


SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Formyltransferase
superfamily: Formyltransferase
family: Formyltransferase
domain: Polymyxin resistance protein ArnA, N-terminal domain
species: Escherichia coli [TaxId: 562]