Query         gi|254780570|ref|YP_003064983.1| phosphoribosylglycinamide formyltransferase [Candidatus Liberibacter asiaticus str. psy62]
Match_columns 205
No_of_seqs    135 out of 5334
Neff          6.9 
Searched_HMMs 13730
Date          Wed Jun  1 10:17:13 2011
Command       /home/congqian_1/programs/hhpred/hhsearch -i 254780570.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm 

 No Hit                             Prob E-value P-value  Score    SS Cols Query HMM  Template HMM
  1 d1jkxa_ c.65.1.1 (A:) Glycinam 100.0       0       0  376.6  20.8  200    4-203     1-200 (209)
  2 d1meoa_ c.65.1.1 (A:) Glycinam 100.0       0       0  361.5  18.7  195    4-198     1-195 (205)
  3 d2bw0a2 c.65.1.1 (A:1-203) 10- 100.0 1.4E-35   1E-39  262.9  15.9  186    4-195     1-191 (203)
  4 d1fmta2 c.65.1.1 (A:1-206) Met 100.0   2E-35 1.5E-39  261.8  16.2  182    3-195     3-194 (206)
  5 d2blna2 c.65.1.1 (A:1-203) Pol 100.0 3.3E-35 2.4E-39  260.3  13.8  180    4-196     1-189 (203)
  6 d1zgha2 c.65.1.1 (A:1-164) Met  99.9 7.5E-25 5.5E-29  188.9   9.9  114   75-195    40-153 (164)
  7 d1nvmb1 c.2.1.3 (B:1-131,B:287  95.9   0.031 2.2E-06   32.9   8.7   76    1-89      1-78  (157)
  8 d1r0ka2 c.2.1.3 (A:3-126,A:265  93.4    0.12 8.9E-06   28.8   6.4   56    3-61      2-59  (150)
  9 d1q0qa2 c.2.1.3 (A:1-125,A:275  92.4    0.19 1.4E-05   27.5   6.3   54    4-60      2-57  (151)
 10 d1zh8a1 c.2.1.3 (A:4-131,A:276  91.2    0.48 3.5E-05   24.7   7.2   73    1-89      1-74  (181)
 11 d2d13a1 c.26.2.1 (A:2-227) Hyp  90.1    0.61 4.5E-05   24.0   7.8   80    3-88      3-95  (226)
 12 d1ydwa1 c.2.1.3 (A:6-133,A:305  88.7    0.71 5.2E-05   23.5   6.5   75    3-91      1-75  (184)
 13 d1f0ka_ c.87.1.2 (A:) Peptidog  87.2    0.95 6.9E-05   22.7   6.5   83    4-90      1-98  (351)
 14 d1ni5a1 c.26.2.5 (A:0-226) tRN  86.1     1.1 7.8E-05   22.3   8.1   60    3-62     13-82  (227)
 15 d1pfka_ c.89.1.1 (A:) ATP-depe  85.1     0.9 6.6E-05   22.8   5.4   33    1-36      1-38  (320)
 16 d1yo6a1 c.2.1.2 (A:1-250) Puta  84.7    0.91 6.6E-05   22.8   5.2   88    1-92      1-92  (250)
 17 d1kjqa2 c.30.1.1 (A:2-112) Gly  84.4       1 7.4E-05   22.5   5.4   94    3-114    11-104 (111)
 18 d1np3a2 c.2.1.6 (A:1-182) Clas  80.2     1.8 0.00013   20.7   5.9  112    3-131    16-143 (182)
 19 d1f06a1 c.2.1.3 (A:1-118,A:269  76.3     2.3 0.00017   20.0   5.8   39    1-42      1-39  (170)
 20 d1wy5a1 c.26.2.5 (A:1-216) Til  76.1     2.4 0.00017   19.9   5.7   88    3-91     24-134 (216)
 21 d1pvva2 c.78.1.1 (A:151-313) O  74.0     1.4  0.0001   21.5   3.4   26   94-121   101-126 (163)
 22 d1v4va_ c.87.1.3 (A:) UDP-N-ac  72.6     2.9 0.00021   19.4   4.8  112    4-116     3-124 (373)
 23 d1n1ea2 c.2.1.6 (A:9-197) Glyc  71.4       2 0.00014   20.5   3.6   31    1-36      5-36  (189)
 24 d1b74a1 c.78.2.1 (A:1-105) Glu  69.3     3.4 0.00024   18.9   4.7   93    4-116     1-99  (105)
 25 d1hdoa_ c.2.1.2 (A:) Biliverdi  64.6     4.1  0.0003   18.3   5.0   35    1-38      1-35  (205)
 26 d1iowa1 c.30.1.2 (A:1-96) D-Al  59.7       5 0.00037   17.7   4.1   26    2-27      1-33  (96)
 27 d2at2a2 c.78.1.1 (A:145-295) A  58.8     4.6 0.00033   18.0   3.5   24   95-120    88-111 (151)
 28 d1pg5a2 c.78.1.1 (A:147-299) A  58.5     5.2 0.00038   17.6   8.5   98    3-120     3-117 (153)
 29 d1jf8a_ c.44.1.1 (A:) Arsenate  56.5     5.5  0.0004   17.4   3.6   55    3-57      2-59  (130)
 30 d2czca2 c.2.1.3 (A:1-139,A:302  56.3     5.7 0.00041   17.3   7.2   55    2-60      1-55  (172)
 31 d1h6da1 c.2.1.3 (A:51-212,A:37  54.4     6.1 0.00044   17.1   6.9   75    3-90     33-108 (221)
 32 d1gpja2 c.2.1.7 (A:144-302) Gl  52.9     6.4 0.00047   16.9   6.0   81    2-101    23-105 (159)
 33 d2i6ga1 c.66.1.44 (A:1-198) Pu  52.7     6.5 0.00047   16.9   4.5   77    3-98     31-111 (198)
 34 d1qh8b_ c.92.2.3 (B:) Nitrogen  51.1     6.8  0.0005   16.8   5.4   52   12-65    124-188 (519)
 35 d4pfka_ c.89.1.1 (A:) ATP-depe  49.3     7.3 0.00053   16.6   3.7  100    4-109     2-121 (319)
 36 d1qfja2 c.25.1.1 (A:98-232) NA  48.3     7.6 0.00055   16.5   4.3   39    3-41      5-44  (135)
 37 d1npya1 c.2.1.7 (A:103-269) Sh  48.1     7.6 0.00055   16.5   6.1   47    3-54     17-63  (167)
 38 d1ybha3 c.36.1.9 (A:460-667) A  48.0     7.5 0.00055   16.5   3.2   12  122-133   196-207 (208)
 39 d3ck2a1 d.159.1.7 (A:1-173) Un  47.4     7.3 0.00053   16.6   3.0   25    1-25      1-27  (173)
 40 d2dt5a2 c.2.1.12 (A:78-203) Tr  46.6     6.2 0.00045   17.0   2.6   49    4-58      4-52  (126)
 41 d2hzba1 c.143.1.1 (A:2-312) Hy  45.9     8.2  0.0006   16.2   4.1   32    3-38      2-33  (311)
 42 d1ltqa1 c.108.1.9 (A:153-301)   45.8     8.2  0.0006   16.2   3.9   22   18-42     42-63  (149)
 43 d3euga_ c.18.1.1 (A:) Uracil-D  45.2     3.4 0.00025   18.8   1.1   53   68-121   138-193 (225)
 44 d1vl2a1 c.26.2.1 (A:2-169) Arg  44.0     8.7 0.00064   16.0   3.8   32    3-39      1-34  (168)
 45 d1tlta1 c.2.1.3 (A:5-127,A:268  43.7     8.8 0.00064   16.0   6.0   51    3-57      1-52  (164)
 46 d2yvta1 d.159.1.6 (A:4-260) Un  43.2     6.9 0.00051   16.7   2.4   34    2-37      1-36  (257)
 47 d1krha2 c.25.1.2 (A:206-338) B  42.6     9.2 0.00067   15.9   3.8   40    3-42      5-45  (133)
 48 d1tzya_ a.22.1.1 (A:) Histone   42.4     3.3 0.00024   19.0   0.6   12  106-117    95-106 (106)
 49 d1fdra2 c.25.1.1 (A:101-248) F  42.2     9.3 0.00068   15.8   3.9   38    4-41      7-45  (148)
 50 d1jyka_ c.68.1.13 (A:) CTP:pho  42.1     9.3 0.00068   15.8   8.3   84    2-90      2-105 (229)
 51 d2j8xa1 c.18.1.1 (A:26-255) Ur  41.0     6.6 0.00048   16.9   2.0   92   16-116    89-193 (230)
 52 d1ehia1 c.30.1.2 (A:3-134) D-a  40.9     9.7 0.00071   15.7   4.7   39    3-42      1-46  (132)
 53 d1m1na_ c.92.2.3 (A:) Nitrogen  38.8      10 0.00076   15.5   5.8   54   12-65    123-184 (477)
 54 d1vlva2 c.78.1.1 (A:153-313) O  38.5      11 0.00077   15.5   4.3   31    3-35      3-33  (161)
 55 d1txga2 c.2.1.6 (A:1-180) Glyc  37.7      11 0.00079   15.4   4.0   19    4-22      1-20  (180)
 56 d1u35c1 a.22.1.1 (C:814-919) m  37.5     4.3 0.00032   18.1   0.6   12  106-117    94-105 (106)
 57 d1e9yb2 c.1.9.2 (B:132-431,B:4  36.9      11 0.00081   15.3   4.9   89    3-99     59-169 (389)
 58 d2nvwa1 c.2.1.3 (A:2-154,A:374  36.3      11 0.00083   15.2   6.3   74    4-89     17-92  (237)
 59 d1u6ka1 c.127.1.1 (A:2-283) F4  36.2     3.2 0.00023   19.0  -0.2   52   29-87     62-117 (282)
 60 d1umka2 c.25.1.1 (A:154-300) c  34.6      12 0.00088   15.1   4.8   39    4-42     19-59  (147)
 61 d1bg6a2 c.2.1.6 (A:4-187) N-(1  34.4      12 0.00089   15.0   5.1   46    3-56      1-47  (184)
 62 d1ekxa2 c.78.1.1 (A:151-310) A  34.1      12  0.0009   15.0   8.9  110    3-151     4-132 (160)
 63 d1y0ba1 c.61.1.1 (A:1-191) Xan  34.0      12  0.0009   15.0   6.9   16   46-61     66-81  (191)
 64 d1okkd2 c.37.1.10 (D:97-303) G  32.8      13 0.00094   14.9   6.5  145    3-153     5-172 (207)
 65 d1ua4a_ c.72.1.3 (A:) ADP-depe  32.4      11 0.00084   15.2   2.1   26   70-96    210-237 (454)
 66 d1c7qa_ c.80.1.2 (A:) Phosphog  32.1      13 0.00097   14.8   7.4   58    4-62    130-197 (442)
 67 d1o6ca_ c.87.1.3 (A:) UDP-N-ac  31.8      13 0.00098   14.7   6.6  112    3-116     2-124 (377)
 68 d1ml4a2 c.78.1.1 (A:152-308) A  29.9      14   0.001   14.5   7.8   98    3-120     4-120 (157)
 69 d1duvg2 c.78.1.1 (G:151-333) O  29.3      15  0.0011   14.5   3.6   32    3-36      5-36  (183)
 70 d1jqea_ c.66.1.19 (A:) Histami  28.8      15  0.0011   14.4   7.6   90    5-96     43-137 (280)
 71 d4ubpc2 c.1.9.2 (C:132-434,C:4  28.6      15  0.0011   14.4   4.8   89    3-99     60-170 (390)
 72 d1oj7a_ e.22.1.2 (A:) Hypothet  28.4      15  0.0011   14.4   4.0   78   12-94     18-100 (390)
 73 d1tvca2 c.25.1.2 (A:111-251) M  28.2      15  0.0011   14.3   4.9   38    4-41      9-47  (141)
 74 d2qv7a1 e.52.1.2 (A:1-312) Dia  28.2      15  0.0011   14.3   6.3   38    2-41      1-44  (312)
 75 d1vima_ c.80.1.3 (A:) Hypothet  28.0      15  0.0011   14.3   3.9   11    5-15     84-94  (192)
 76 d2hxma1 c.18.1.1 (A:82-304) Ur  28.0     9.1 0.00067   15.9   1.0   98   16-121    88-197 (223)
 77 d1p77a1 c.2.1.7 (A:102-272) Sh  27.9      16  0.0011   14.3   5.6   45    3-53     18-62  (171)
 78 d1l2la_ c.72.1.3 (A:) ADP-depe  27.8      14   0.001   14.7   1.9   24   71-95    209-234 (451)
 79 d1xeaa1 c.2.1.3 (A:2-122,A:267  27.8      16  0.0011   14.3   6.9   70    3-91      1-71  (167)
 80 d2g5ca2 c.2.1.6 (A:30-200) Pre  25.9      17  0.0012   14.1   8.4   49    4-58      2-51  (171)
 81 d2bkaa1 c.2.1.2 (A:5-236) TAT-  25.7      17  0.0012   14.0   6.4   39    1-41     12-50  (232)
 82 d2ioja1 c.98.2.2 (A:206-325) H  25.6      17  0.0012   14.0   2.7   34   32-65     68-104 (120)
 83 d1f6da_ c.87.1.3 (A:) UDP-N-ac  25.5      17  0.0012   14.0   7.8  111    4-116     1-122 (376)
 84 d2fiqa1 c.1.10.7 (A:1-420) Put  24.6      18  0.0013   13.9   2.5   46   17-63      1-48  (420)
 85 d2phza1 c.92.2.4 (A:20-296) Ir  24.5      15  0.0011   14.4   1.6   18  180-197   236-253 (277)
 86 d1ejxc2 c.1.9.2 (C:1130-1422,C  24.3      18  0.0013   13.9   4.3   89    3-99     59-169 (385)
 87 d1es6a2 b.31.1.1 (A:201-321) E  24.1      10 0.00072   15.6   0.6   15  111-125    85-99  (121)
 88 d1nyta1 c.2.1.7 (A:102-271) Sh  23.8      18  0.0013   13.8   7.0   44    3-52     18-61  (170)
 89 d1p8aa_ c.44.1.1 (A:) Tyrosine  23.7      18  0.0013   13.8   4.7   56    2-57      3-65  (146)
 90 d1ulsa_ c.2.1.2 (A:) beta-keto  23.6      18  0.0013   13.8   5.3   82    3-92      4-88  (242)
 91 d1wu2a3 c.57.1.2 (A:181-324) M  23.0      19  0.0014   13.7   3.1   76    2-92      1-80  (144)
 92 d1gc5a_ c.72.1.3 (A:) ADP-depe  23.0      17  0.0012   14.1   1.5   22   70-91    219-242 (467)
 93 d1o2da_ e.22.1.2 (A:) Alcohol   23.0      19  0.0014   13.7   6.8   86    3-95      7-99  (359)
 94 d1dxha2 c.78.1.1 (A:151-335) O  22.9      19  0.0014   13.7   3.8  101    3-121     5-130 (185)
 95 d2piaa2 c.25.1.2 (A:104-223) P  22.8      19  0.0014   13.7   4.0   38    3-41      8-46  (120)
 96 d1iiba_ c.44.2.1 (A:) Enzyme I  22.4      19  0.0014   13.6   4.0   32    3-34      1-35  (103)
 97 d1uxja1 c.2.1.5 (A:2-143) Mala  22.3      20  0.0014   13.6   3.3   30    3-36      1-31  (142)
 98 d2qy9a2 c.37.1.10 (A:285-495)   22.1      20  0.0014   13.6   5.7  142    4-153     9-175 (211)
 99 d1p3y1_ c.34.1.1 (1:) MrsD {Ba  21.3      20  0.0015   13.5   4.3   36    3-40      6-43  (183)
100 d1js1x2 c.78.1.1 (X:164-324) T  21.1      19  0.0014   13.7   1.5   25   94-121    94-118 (161)
101 d1j8yf2 c.37.1.10 (F:87-297) G  21.0      21  0.0015   13.4   7.0   57    3-61     11-75  (211)
102 d2b8na1 c.118.1.1 (A:4-417) Pu  21.0      19  0.0014   13.7   1.5   12    5-16    113-124 (414)
103 d2fywa1 c.135.1.1 (A:1-265) Hy  21.0      21  0.0015   13.4   5.5   38   17-59     47-98  (265)
104 d1tuga1 c.78.1.1 (A:1-150,A:15  20.6      21  0.0015   13.4  10.1   20   95-116   249-268 (310)
105 d1ep3b2 c.25.1.3 (B:103-262) D  20.5      21  0.0015   13.4   6.1   37    3-41      8-45  (160)
106 d2ffea1 c.143.1.1 (A:1-309) LP  20.2      22  0.0016   13.3   2.3   27   12-38      5-31  (309)
107 d2djia3 c.36.1.9 (A:364-592) P  20.1      17  0.0012   14.0   1.1   12   46-57     89-100 (229)

No 1  
>d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=0  Score=376.63  Aligned_cols=200  Identities=39%  Similarity=0.704  Sum_probs=194.9

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      +|||||+||+||||++|+++++.++++++|++|+||++++.+++++++.+++.+....+.+..+..++..+.+.++++++
T Consensus         1 MkIaVl~SG~GSnL~aLl~a~~~~~l~~~I~~Visn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~   80 (209)
T d1jkxa_           1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP   80 (209)
T ss_dssp             CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC
T ss_pred             CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC
T ss_conf             98999981682779999999871899978999995798753120120134320232001234433348999999986099


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |++|++|||+|+|+++++.|++++||+||||||+|||++|++|++.||++++|+|+|+|++++|+||||.|++++|.++|
T Consensus        81 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~~rG~~p~~~~i~~g~~~~G~t~h~~~~~~D~G~Ii~q~~~~i~~~d  160 (209)
T d1jkxa_          81 DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD  160 (209)
T ss_dssp             SEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTC
T ss_pred             CEEEEEEEEEECCHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEEECCCCCC
T ss_conf             88998305686170553023367797077311036776754679987981103338984577886337567897379997


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEC
Q ss_conf             9999999999999999999999998695699898699950
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHHLIG  203 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~~~~  203 (205)
                      |+++|++|++.+|+++|+++|+++++|++.+.++++.+.|
T Consensus       161 ~~~~l~~k~~~~e~~l~~~~i~~i~~~~i~~~~~~~~~~~  200 (209)
T d1jkxa_         161 SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDG  200 (209)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEETT
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECC
T ss_conf             9999999999999999999999998099688599889999


No 2  
>d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=0  Score=361.48  Aligned_cols=195  Identities=41%  Similarity=0.685  Sum_probs=189.3

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC
Q ss_conf             65999976985018999999973999847999997688887888998608950463013233221012432100012343
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP   83 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~   83 (205)
                      .|+|||+||+||||++|++++++++++++|++|+||+|+++++++++..+++...+..+....++.++.++.+.++++++
T Consensus         1 ~ri~vl~SG~Gsnl~aLl~~~~~~~l~~~I~~Vitn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~   80 (205)
T d1meoa_           1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI   80 (205)
T ss_dssp             CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC
T ss_pred             CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC
T ss_conf             98999983781759999999766999978999997873323031133322222112444210023578999999850165


Q ss_pred             EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC
Q ss_conf             03643112220572132106654231353223332444212100002465344530331232186626778998718998
Q gi|254780570|r   84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD  163 (205)
Q Consensus        84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d  163 (205)
                      |+++++|||+|+|+++++.|++++||+||||||+|||++|++||+.+|++++|+|+|+|++++|+|||+.|++++|.++|
T Consensus        81 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~~rG~~~~~~ai~~g~~~~G~tih~v~~~iD~G~Ii~q~~~~I~~~d  160 (205)
T d1meoa_          81 DIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGD  160 (205)
T ss_dssp             CEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEEEEEECCTTC
T ss_pred             CEEEEECHHCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCC
T ss_conf             43342002200687888732577352376422111100048899863986510247863477897747689997799997


Q ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCE
Q ss_conf             99999999999999999999999986956998986
Q gi|254780570|r  164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDH  198 (205)
Q Consensus       164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~  198 (205)
                      |+++|++|++.+|+++|+++|+.+++|++...++.
T Consensus       161 t~~~L~~k~~~~~~~l~~~~l~~i~~g~i~~~~~~  195 (205)
T d1meoa_         161 TVATLSERVKLAEHKIFPAALQLVASGTVQLGENG  195 (205)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTS
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC
T ss_conf             99999999999999999999999985994788997


No 3  
>d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00  E-value=1.4e-35  Score=262.90  Aligned_cols=186  Identities=20%  Similarity=0.282  Sum_probs=154.8

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC----CCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             65999976985018999999973999847999997688----88788899860895046301323322101243210001
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS----NAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~----da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      +||++|  |+++....+++...+.  +++|++|+|..+    .......|++++||.+....  ..++...+.++++.++
T Consensus         1 MkI~~~--G~~~~~~~~l~~L~~~--~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~--~~~~~~~~~~~~~~l~   74 (203)
T d2bw0a2           1 MKIAVI--GQSLFGQEVYCHLRKE--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSR--WRAKGQALPDVVAKYQ   74 (203)
T ss_dssp             CEEEEE--CCHHHHHHHHHHHHHT--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSC--CEETTEECHHHHHHHH
T ss_pred             CEEEEE--CCCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCC--CCCCCCCCHHHHHHHH
T ss_conf             989998--5889999999999988--996899982898676777234447761986211321--1111215699999999


Q ss_pred             CCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEEC
Q ss_conf             23430364311222057213210665423135322333244421210000246534453033123218662677899871
Q gi|254780570|r   80 SIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPV  159 (205)
Q Consensus        80 ~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i  159 (205)
                      +.+||++|++||++|||+++++.++.+++|+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|+|+.|++++|
T Consensus        75 ~~~~Dliv~~~~~~ii~~~~l~~~~~g~iN~H~slLP~yrG~~pi~wai~~g~~~~GvTih~~~~~~D~G~Ii~q~~~~i  154 (203)
T d2bw0a2          75 ALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEV  154 (203)
T ss_dssp             TTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEEEEEC
T ss_pred             HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEECCCC
T ss_conf             71998369851101100232211156766653213311256430333201344566743687144456441220412468


Q ss_pred             CCCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             89989999999999-9999999999999986956998
Q gi|254780570|r  160 SSQDTESSLSQKVL-SAEHLLYPLALKYTILGKTSNS  195 (205)
Q Consensus       160 ~~~d~~~~l~~rv~-~~E~~l~~~~i~~~~~g~i~~~  195 (205)
                      .++||.++|+.|.+ .+..++++++++.+.+|++...
T Consensus       155 ~~~dt~~~l~~k~l~~~~~~~~~~~l~~i~~g~~~~~  191 (203)
T d2bw0a2         155 LPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRL  191 (203)
T ss_dssp             CTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCB
T ss_pred             CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
T ss_conf             9875287999999999999999999999984999757


No 4  
>d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=2e-35  Score=261.80  Aligned_cols=182  Identities=21%  Similarity=0.283  Sum_probs=151.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC----------CHHHHHHHHCCCCEEEEECCCCCCCCCHHH
Q ss_conf             6659999769850189999999739998479999976888----------878889986089504630132332210124
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN----------AQGLVKARKEKVPTFPIPYKDYISRREHEK   72 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d----------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~   72 (205)
                      ++||++|+|  +.....++++..+.  +++|++|+|..++          ......+...++|.......       .++
T Consensus         3 ~mKI~f~G~--~~~~~~~L~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~   71 (206)
T d1fmta2           3 SLRIIFAGT--PDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL-------RPQ   71 (206)
T ss_dssp             CCEEEEEEC--SHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS-------CSH
T ss_pred             CCEEEEECC--CHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC-------CCH
T ss_conf             748999889--88999999999968--9977999969983013676223362321010037653222222-------211


Q ss_pred             HHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEE
Q ss_conf             32100012343036431122205721321066542313532233324442121000024653445303312321866267
Q gi|254780570|r   73 AILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPII  152 (205)
Q Consensus        73 ~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii  152 (205)
                      ...+.++..++|+++++||++++|+++++.|+.++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+|+||
T Consensus        72 ~~~~~~~~~~~d~~v~~~~~~ii~~~il~~~k~g~iN~Hps~LP~yRG~~pi~wai~nge~~~GvT~h~i~~~iD~G~Ii  151 (206)
T d1fmta2          72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDML  151 (206)
T ss_dssp             HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEE
T ss_pred             HHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEECEEEEEECCCCCHHHHH
T ss_conf             46777764133278864122136654675387774525823567652000132588749823530688861555757764


Q ss_pred             EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             7899871899899999999999999999999999986956998
Q gi|254780570|r  153 AQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS  195 (205)
Q Consensus       153 ~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~  195 (205)
                      .|++++|.++||..+|++|+..++.++++++|+.+.+|++.-.
T Consensus       152 ~q~~~~i~~~dt~~~l~~k~~~~~~~l~~~~i~~i~~~~~~~~  194 (206)
T d1fmta2         152 YKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPE  194 (206)
T ss_dssp             EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCB
T ss_pred             HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             3001344335659999999999999999999999984998426


No 5  
>d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=100.00  E-value=3.3e-35  Score=260.28  Aligned_cols=180  Identities=23%  Similarity=0.344  Sum_probs=153.1

Q ss_pred             CEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCC-------CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             6599997698-50-189999999739998479999976888-------87888998608950463013233221012432
Q gi|254780570|r    4 KNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSN-------AQGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         4 ~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~d-------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      +|+++|+++. |. +|++|+++      +++|++|+|..++       +...+.|+++|||++....-       .++++
T Consensus         1 Mkiv~~~~~~~g~~~l~~L~~~------g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~-------~~~~~   67 (203)
T d2blna2           1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV-------NHPLW   67 (203)
T ss_dssp             CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC-------CSHHH
T ss_pred             CEEEEEECCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEECCCC-------CCHHH
T ss_conf             9399995577899999999978------9988999848999876666587899999859962211212-------10123


Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.+||+++++||++|+|+++++.++.+++|+|||+||+|||.+|++|++.+|++++|+|+|+|++++|+|+|+.|
T Consensus        68 ~~~i~~~~~Dlii~~g~~~ii~~~il~~~~~~~iN~H~slLP~yrG~~p~~wai~~g~~~~G~Tih~i~~~iD~G~Il~q  147 (203)
T d2blna2          68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQ  147 (203)
T ss_dssp             HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE
T ss_pred             HHHHHHHCCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEE
T ss_conf             44543203351465411100000110123778988755222055443234432303445543204775315777610035


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC
Q ss_conf             998718998999999999999999999999999869569989
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSN  196 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~  196 (205)
                      ++++|.++||..+|++|+..++.+++.++++.+.+|++....
T Consensus       148 ~~~~i~~~~t~~~l~~k~~~~~~~l~~~~l~~i~~g~~~~~~  189 (203)
T d2blna2         148 LRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA  189 (203)
T ss_dssp             EEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBC
T ss_pred             CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC
T ss_conf             343342023589999999999999999999999869985145


No 6  
>d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase {Clostridium thermocellum [TaxId: 1515]}
Probab=99.91  E-value=7.5e-25  Score=188.87  Aligned_cols=114  Identities=15%  Similarity=0.289  Sum_probs=100.1

Q ss_pred             HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE
Q ss_conf             10001234303643112220572132106654231353223332444212100002465344530331232186626778
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ  154 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q  154 (205)
                      .+.+++.+||+++++||++|+|+++++.+  +++|+|||+||+|||.+|+.||+.+|++++|+|+|+|++++|+|+|+.|
T Consensus        40 ~~~i~~~~~D~ii~~g~~~ii~~~il~~~--~~in~H~s~LP~yRG~~p~~wai~~~~~~~Gvtih~~~~~iD~G~Ii~q  117 (164)
T d1zgha2          40 FEKVKLINPEYILFPHWSWIIPKEIFENF--TCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFK  117 (164)
T ss_dssp             HHHHHHHCCSEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEE
T ss_pred             HHHHHHCCCCEEEEECCCCCCCHHHHHHC--CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE
T ss_conf             99999609999999370230389999409--9820897801244233533310012335542036774067886778999


Q ss_pred             EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE
Q ss_conf             99871899899999999999999999999999986956998
Q gi|254780570|r  155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS  195 (205)
Q Consensus       155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~  195 (205)
                      +.+++.  ||.+++..|...   .++.+.++.+++++....
T Consensus       118 ~~~~i~--~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~  153 (164)
T d1zgha2         118 RDLDLY--GTAEEIFMRASK---IIFNDMIPELLTKRPVPQ  153 (164)
T ss_dssp             EEEECC--SCHHHHHHHHHH---HHHHTHHHHHHHHCCCCB
T ss_pred             EEECCC--CCHHHHHHHHHH---HHHHHHHHHHHCCCCEEE
T ss_conf             997789--999999999999---999999999986998117


No 7  
>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}
Probab=95.89  E-value=0.031  Score=32.94  Aligned_cols=76  Identities=20%  Similarity=0.261  Sum_probs=46.9

Q ss_pred             CCC-CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             986-6599997698-50189999999739998479999976888878889986089504630132332210124321000
Q gi|254780570|r    1 MIR-KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         1 M~k-~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      |.+ .|++|+++|+ |+.+  +++..+.. -..++.+|.+-++.+.++.+|+++++++..-      +-    +.+.+..
T Consensus         1 M~kkirvaIIGaG~ig~~~--~~~~l~~~-~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~~----d~l~~~~   67 (157)
T d1nvmb1           1 MNQKLKVAIIGSGNIGTDL--MIKVLRNA-KYLEMGAMVGIDAASDGLARAQRMGVTTTYA------GV----EGLIKLP   67 (157)
T ss_dssp             CCSCEEEEEECCSHHHHHH--HHHHHHHC-SSEEEEEEECSCTTCHHHHHHHHTTCCEESS------HH----HHHHHSG
T ss_pred             CCCCCEEEEECCCHHHHHH--HHHHHHHC-CCCEEEEEEECCHHCCCHHHHHHCCCCCCCC------CE----EEEEECC
T ss_conf             9987679998685999999--99999619-8655999985533203103566539740005------61----5665024


Q ss_pred             CCCCCEEEEEE
Q ss_conf             12343036431
Q gi|254780570|r   79 SSIQPDLICLA   89 (205)
Q Consensus        79 ~~~~~Dliv~~   89 (205)
                      +..++|+++.+
T Consensus        68 ~~~~iDiVf~A   78 (157)
T d1nvmb1          68 EFADIDFVFDA   78 (157)
T ss_dssp             GGGGEEEEEEC
T ss_pred             CCCCCCEEEEC
T ss_conf             55546889982


No 8  
>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}
Probab=93.39  E-value=0.12  Score=28.83  Aligned_cols=56  Identities=11%  Similarity=0.151  Sum_probs=39.4

Q ss_pred             CCEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf             66599997698--501899999997399984799999768888788899860895046301
Q gi|254780570|r    3 RKNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY   61 (205)
Q Consensus         3 k~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~   61 (205)
                      .|||+||+|.+  |++...+++...   -.++|.++-+++.-..-.+.+++++-++.++..
T Consensus         2 pK~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d   59 (150)
T d1r0ka2           2 PRTVTVLGATGSIGHSTLDLIERNL---DRYQVIALTANRNVKDLADAAKRTNAKRAVIAD   59 (150)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTG---GGEEEEEEEESSCHHHHHHHHHHTTCSEEEESC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHCCC---CCCEEEEEEECCCHHHHHHHHHHHCCCCCEECC
T ss_conf             9589998879699999999998197---771899999579789988888753444303211


No 9  
>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}
Probab=92.41  E-value=0.19  Score=27.49  Aligned_cols=54  Identities=13%  Similarity=0.130  Sum_probs=36.9

Q ss_pred             CEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             6599997698--50189999999739998479999976888878889986089504630
Q gi|254780570|r    4 KNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIP   60 (205)
Q Consensus         4 ~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~   60 (205)
                      |||+||.|.+  |++...+++.   ..-.++|.++.+++.-..-.+.+++++-++.++.
T Consensus         2 K~I~IlGsTGSIG~~tL~Vi~~---~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~   57 (151)
T d1q0qa2           2 KQLTILGSTGSIGCSTLDVVRH---NPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMD   57 (151)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHH---CTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEES
T ss_pred             CEEEEECCCCHHHHHHHHHHHH---CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCC
T ss_conf             7699975796999999999993---9788489999955968889999998764212335


No 10 
>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}
Probab=91.19  E-value=0.48  Score=24.75  Aligned_cols=73  Identities=22%  Similarity=0.064  Sum_probs=41.0

Q ss_pred             CCCCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             9866599997698501899-999997399984799999768888788899860895046301323322101243210001
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      |.|.|+++.  |.|+-... .+.+.++-.-.+++++|++.++ ...-+.+++++++...      .+   +    -+.++
T Consensus         1 MkkirigiI--G~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~-~~~~~~~~~~~~~~~~------~~---~----~ell~   64 (181)
T d1zh8a1           1 LRKIRLGIV--GCGIAARELHLPALKNLSHLFEITAVTSRTR-SHAEEFAKMVGNPAVF------DS---Y----EELLE   64 (181)
T ss_dssp             CCCEEEEEE--CCSHHHHHTHHHHHHTTTTTEEEEEEECSSH-HHHHHHHHHHSSCEEE------SC---H----HHHHH
T ss_pred             CCCCEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEEEEECCH-HHHHHHHCCCCCCCEE------EE---E----ECCCC
T ss_conf             997679999--4989999999999984899758999982627-6665410101223203------32---2----00233


Q ss_pred             CCCCEEEEEE
Q ss_conf             2343036431
Q gi|254780570|r   80 SIQPDLICLA   89 (205)
Q Consensus        80 ~~~~Dliv~~   89 (205)
                      +.++|.++.+
T Consensus        65 ~~~id~v~I~   74 (181)
T d1zh8a1          65 SGLVDAVDLT   74 (181)
T ss_dssp             SSCCSEEEEC
T ss_pred             CCCCCEEECC
T ss_conf             3333122012


No 11 
>d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=90.08  E-value=0.61  Score=23.98  Aligned_cols=80  Identities=18%  Similarity=0.187  Sum_probs=50.9

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEEC-C--CCC--------HHH-HHHHHCCCCEEEEECCCCCCCCC
Q ss_conf             66599997698-50189999999739998479999976-8--888--------788-89986089504630132332210
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSD-N--SNA--------QGL-VKARKEKVPTFPIPYKDYISRRE   69 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn-~--~da--------~~l-~~a~~~~Ip~~~i~~~~~~~~~~   69 (205)
                      .+|++++.||+ .|+ .++..+.+++   .+|++.+|- .  .++        ..+ ..|+..|||........  ..+.
T Consensus         3 ~~~V~vl~SGGKDS~-lAl~~a~~~G---~eV~~L~t~~~~~~~s~~~h~~~~~ll~~qAealgiPl~~~~~~~--~~e~   76 (226)
T d2d13a1           3 LADVAVLYSGGKDSN-YALYWALKSG---LRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKG--EKEK   76 (226)
T ss_dssp             SCEEEEECCSSHHHH-HHHHHHHHTT---CEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC----CTTS
T ss_pred             CEEEEEEECCCHHHH-HHHHHHHHCC---CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC--CCHH
T ss_conf             221999926869999-9999999859---905999998437899671657889999999986389826873478--6129


Q ss_pred             HHHHHHHHCCCCCCEEEEE
Q ss_conf             1243210001234303643
Q gi|254780570|r   70 HEKAILMQLSSIQPDLICL   88 (205)
Q Consensus        70 ~~~~l~~~l~~~~~Dliv~   88 (205)
                      +-+++.+.+++.++|-++.
T Consensus        77 ~~~~l~~~l~~~~v~~vv~   95 (226)
T d2d13a1          77 EVEDLKNVLEGLKVDGIVA   95 (226)
T ss_dssp             HHHHHHHHHHTBCCSEEEC
T ss_pred             HHHHHHHHHHHCCCCCEEE
T ss_conf             9999999998607253676


No 12 
>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=88.68  E-value=0.71  Score=23.55  Aligned_cols=75  Identities=15%  Similarity=-0.011  Sum_probs=41.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      |.|+++.+.|  +-.+..+++.+..+ .++++.|.+.++ ...-+.++++++|...--+   .   .    +-+.+++.+
T Consensus         1 kiki~iIG~G--~~g~~~~~~l~~~~-~~~i~ai~d~~~-~~~~~~~~~~~~~~~~~~~---~---~----~~~ll~~~~   66 (184)
T d1ydwa1           1 QIRIGVMGCA--DIARKVSRAIHLAP-NATISGVASRSL-EKAKAFATANNYPESTKIH---G---S----YESLLEDPE   66 (184)
T ss_dssp             CEEEEEESCC--TTHHHHHHHHHHCT-TEEEEEEECSSH-HHHHHHHHHTTCCTTCEEE---S---S----HHHHHHCTT
T ss_pred             CEEEEEECCC--HHHHHHHHHHHHCC-CCEEEEEEECCC-CCCCCCHHCCCCCCCEEEC---C---C----HHHHHHCCC
T ss_conf             9699999697--99999999998689-978999996782-0032101013455301212---7---6----787521132


Q ss_pred             CEEEEEEEE
Q ss_conf             303643112
Q gi|254780570|r   83 PDLICLAGY   91 (205)
Q Consensus        83 ~Dliv~~g~   91 (205)
                      +|+++.+..
T Consensus        67 iD~v~I~tp   75 (184)
T d1ydwa1          67 IDALYVPLP   75 (184)
T ss_dssp             CCEEEECCC
T ss_pred             CCEEEECCC
T ss_conf             102420232


No 13 
>d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]}
Probab=87.16  E-value=0.95  Score=22.68  Aligned_cols=83  Identities=11%  Similarity=0.086  Sum_probs=48.6

Q ss_pred             CEEEEEECCC-CHH--HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC------------
Q ss_conf             6599997698-501--8999999973999847999997688887888998608950463013233221------------
Q gi|254780570|r    4 KNIVIFISGE-GTN--MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRR------------   68 (205)
Q Consensus         4 ~riavl~SG~-Gsn--l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~------------   68 (205)
                      |||.++.+|+ |+.  +.+|.+...+.  +++|..+.+..  ....+..++.+.++..++...+..+.            
T Consensus         1 kkili~~~GtGGHv~~a~al~~~L~~~--G~eV~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   76 (351)
T d1f0ka_           1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD--RMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIF   76 (351)
T ss_dssp             CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTT--STHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHH
T ss_pred             CEEEEECCCCHHHHHHHHHHHHHHHHC--CCEEEEEEECC--CCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH
T ss_conf             979998388589899999999999858--99899999588--32432235049957999788867777799999998877


Q ss_pred             CHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             0124321000123430364311
Q gi|254780570|r   69 EHEKAILMQLSSIQPDLICLAG   90 (205)
Q Consensus        69 ~~~~~l~~~l~~~~~Dliv~~g   90 (205)
                      ..-......+.+..+|.+++.+
T Consensus        77 ~~~~~~~~i~~~~~~~~~~~~~   98 (351)
T d1f0ka_          77 NAWRQARAIMKAYKPDVVLGMG   98 (351)
T ss_dssp             HHHHHHHHHHHHHCCSEEEECS
T ss_pred             HHHHHHHHHHHCCCCCEEEECC
T ss_conf             7677778876313443001103


No 14 
>d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=86.14  E-value=1.1  Score=22.32  Aligned_cols=60  Identities=13%  Similarity=0.180  Sum_probs=41.3

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEEC---CCCC-----HHHHHHHHCCCCEEEEECC
Q ss_conf             66599997698-50-189999999739998479999976---8888-----7888998608950463013
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSD---NSNA-----QGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn---~~da-----~~l~~a~~~~Ip~~~i~~~   62 (205)
                      ++|++|=+||+ .| .|..++..+.....+.++.++.-|   ++++     ...+.|+++++|+++....
T Consensus        13 ~kkvlva~SGG~DS~~Ll~ll~~~~~~~~~~~l~~~~vdh~~r~~s~~~~~~~~~~~~~~~i~~~i~~~~   82 (227)
T d1ni5a1          13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQ   82 (227)
T ss_dssp             CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC
T ss_conf             9968999638499999999999998758895699998678987521445899999975415763266313


No 15 
>d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]}
Probab=85.07  E-value=0.9  Score=22.83  Aligned_cols=33  Identities=21%  Similarity=0.496  Sum_probs=20.0

Q ss_pred             CCCCEEEEEECCCCH-H----HHHHHHHHHCCCCCCEEEEE
Q ss_conf             986659999769850-1----89999999739998479999
Q gi|254780570|r    1 MIRKNIVIFISGEGT-N----MLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         1 M~k~riavl~SG~Gs-n----l~~Il~~~~~~~~~~eI~~V   36 (205)
                      ||| ||+||-||..+ .    +..+++.....  +.+|.++
T Consensus         1 ~mk-rIgIltsGG~~pg~Na~i~~~v~~~~~~--~~~v~g~   38 (320)
T d1pfka_           1 MIK-KIGVLTSGGDAPGMNAAIRGVVRSALTE--GLEVMGI   38 (320)
T ss_dssp             CCC-EEEEEECSSCCTTHHHHHHHHHHHHHHT--TCEEEEE
T ss_pred             CCC-EEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEE
T ss_conf             986-4999866888668899999999999878--9989999


No 16 
>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}
Probab=84.65  E-value=0.91  Score=22.82  Aligned_cols=88  Identities=15%  Similarity=0.125  Sum_probs=36.6

Q ss_pred             CCCCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC--CCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             986659999769850189-99999973999847999997688887888998608--950463013233221012432100
Q gi|254780570|r    1 MIRKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEK--VPTFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~--Ip~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      |.+|.+  |+.|..|.+= ++.+...+......|.  .+.|.....-+.++..+  +..+.++..+..+-+.+-+.+.+.
T Consensus         1 M~~Kti--lITGassGIG~a~a~~la~~G~~~~Vi--~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~   76 (250)
T d1yo6a1           1 MSPGSV--VVTGANRGIGLGLVQQLVKDKNIRHII--ATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI   76 (250)
T ss_dssp             CCCSEE--EESSCSSHHHHHHHHHHHTCTTCCEEE--EEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEE--EEECCCCHHHHHHHHHHHHCCCCCEEE--EEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH
T ss_conf             968989--995898799999999999779987899--9969999999998720896699998468999999999999999


Q ss_pred             CCCCCCEEEE-EEEEE
Q ss_conf             0123430364-31122
Q gi|254780570|r   78 LSSIQPDLIC-LAGYM   92 (205)
Q Consensus        78 l~~~~~Dliv-~~g~~   92 (205)
                      +....+|++| .||.+
T Consensus        77 ~~~~~idilinnAG~~   92 (250)
T d1yo6a1          77 VGSDGLSLLINNAGVL   92 (250)
T ss_dssp             HGGGCCCEEEECCCCC
T ss_pred             HCCCCEEEEEECCCCC
T ss_conf             5899848999767656


No 17 
>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}
Probab=84.36  E-value=1  Score=22.48  Aligned_cols=94  Identities=15%  Similarity=0.201  Sum_probs=53.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC
Q ss_conf             66599997698501899999997399984799999768888788899860895046301323322101243210001234
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ   82 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~   82 (205)
                      ..||+|+  |.|.-.+-+..+.+  ++++++ .|+...+++.+-..|..    +++.++.+.       +.+.+.....+
T Consensus        11 ~~kigIl--GgGQL~rMla~aA~--~lG~~v-~v~d~~~~~PA~~va~~----~i~~~~~d~-------~~l~~~~~~~~   74 (111)
T d1kjqa2          11 ATRVMLL--GSGELGKEVAIECQ--RLGVEV-IAVDRYADAPAMHVAHR----SHVINMLDG-------DALRRVVELEK   74 (111)
T ss_dssp             CCEEEEE--SCSHHHHHHHHHHH--TTTCEE-EEEESSTTCGGGGGSSE----EEECCTTCH-------HHHHHHHHHHC
T ss_pred             CCEEEEE--ECCHHHHHHHHHHH--HCCCEE-EEECCCCCCCHHHCCCE----EEECCCCCH-------HHHHHHHHHHC
T ss_conf             9799999--37798999999999--889989-99849999836551776----899887899-------99999998627


Q ss_pred             CEEEEEEEEEEECCCHHHHCCCCCEEECCCCC
Q ss_conf             30364311222057213210665423135322
Q gi|254780570|r   83 PDLICLAGYMRLLSRDFVESYKNKILNIHPSL  114 (205)
Q Consensus        83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~Hpsl  114 (205)
                      +|+|..- | --++.+.++......+++|||.
T Consensus        75 ~DviT~E-~-EnI~~~~L~~le~~g~~v~Ps~  104 (111)
T d1kjqa2          75 PHYIVPE-I-EAIATDMLIQLEEEGLNVVPCA  104 (111)
T ss_dssp             CSEEEEC-S-SCSCHHHHHHHHHTTCEESSCH
T ss_pred             CCEEEEE-E-CCCCHHHHHHHHHCCCEECCCH
T ss_conf             7568887-3-6768999999997798577798


No 18 
>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}
Probab=80.20  E-value=1.8  Score=20.74  Aligned_cols=112  Identities=21%  Similarity=0.268  Sum_probs=57.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECC------------CCCCCCCH
Q ss_conf             665999976985018999999973999847999997688887888998608950463013------------23322101
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYK------------DYISRREH   70 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~------------~~~~~~~~   70 (205)
                      .|+|||+  |.||--.+=-...+..  ..+|  ++-.++++...++|++.|.....+...            |..-++.|
T Consensus        16 ~k~IaVi--GYGsQG~AhAlNLrDS--G~~V--~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy   89 (182)
T d1np3a2          16 GKKVAII--GYGSQGHAHACNLKDS--GVDV--TVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLY   89 (182)
T ss_dssp             TSCEEEE--CCSHHHHHHHHHHHHT--TCCE--EEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHH
T ss_pred             CCEEEEE--EECCHHHHHHHHHHHC--CCCE--EEECCCCCCCHHHHHHHCCCCCCHHHHHHHCCEEEEECCHHHHHHHH
T ss_conf             9979999--1371768887551634--9988--99757888437777540534346899864468200104067778999


Q ss_pred             HHHHHHHCCCCCCEEEEEEEE----EEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCC
Q ss_conf             243210001234303643112----2205721321066542313532233324442121000024
Q gi|254780570|r   71 EKAILMQLSSIQPDLICLAGY----MRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSG  131 (205)
Q Consensus        71 ~~~l~~~l~~~~~Dliv~~g~----~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g  131 (205)
                      ++.+...++. .--|.+..||    .+|.|++-++-     +-+    =|+-+| +.+.+.+.+|
T Consensus        90 ~~~I~p~lk~-g~~L~FaHGfnIh~~~I~pp~~vdV-----~mv----APKgpG-~~VR~~y~~G  143 (182)
T d1np3a2          90 KEEIEPNLKK-GATLAFAHGFSIHYNQVVPRADLDV-----IMI----APKAPG-HTVRSEFVKG  143 (182)
T ss_dssp             HHHTGGGCCT-TCEEEESCCHHHHTTSSCCCTTCEE-----EEE----EESSCS-HHHHHHHHTT
T ss_pred             HHHHHHHCCC-CCEEEEECCCEEEEEEEECCCCCCE-----EEE----CCCCCC-CHHHHHHHCC
T ss_conf             8766652587-8679870442487623654788754-----866----454552-1068886367


No 19 
>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}
Probab=76.27  E-value=2.3  Score=19.97  Aligned_cols=39  Identities=26%  Similarity=0.374  Sum_probs=27.2

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             986659999769850189999999739998479999976888
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      |.|.|++|.  |.|.--+..++++++.. +++++.|++.++.
T Consensus         1 M~kirvgii--G~G~ig~~~~~~l~~~~-~~elvav~~~~~~   39 (170)
T d1f06a1           1 MTNIRVAIV--GYGNLGRSVEKLIAKQP-DMDLVGIFSRRAT   39 (170)
T ss_dssp             CCCEEEEEE--CCSHHHHHHHHHHTTCS-SEEEEEEEESSSC
T ss_pred             CCCCEEEEE--CCHHHHHHHHHHHHHCC-CCEEEEEEECCCC
T ss_conf             985569998--97099999999998589-9689999701434


No 20 
>d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]}
Probab=76.09  E-value=2.4  Score=19.94  Aligned_cols=88  Identities=18%  Similarity=0.106  Sum_probs=46.5

Q ss_pred             CCEEEEEECCCC-H-HHHHHHHHHHCCCCC-CEEEEEEECC---CCC-----HHHHHHHHCCCCEEEEECCCCC----CC
Q ss_conf             665999976985-0-189999999739998-4799999768---888-----7888998608950463013233----22
Q gi|254780570|r    3 RKNIVIFISGEG-T-NMLSLIQATKKNDYP-AEIVGVFSDN---SNA-----QGLVKARKEKVPTFPIPYKDYI----SR   67 (205)
Q Consensus         3 k~riavl~SG~G-s-nl~~Il~~~~~~~~~-~eI~~Visn~---~da-----~~l~~a~~~~Ip~~~i~~~~~~----~~   67 (205)
                      .+||+|=+||+- | .|..++..... ..+ .++..+..|.   +++     ...+.|++.|||+++.......    .+
T Consensus        24 ~~kv~Va~SGG~DS~~Ll~lL~~~~~-~~~~~~i~~~~vdh~~r~~s~~~~~~~~~~~~~l~i~~~i~~~~~~~~~~~~~  102 (216)
T d1wy5a1          24 ERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENR  102 (216)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHTT
T ss_pred             CCEEEEEECCCHHHHHHHHHHHHHHH-HCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC
T ss_conf             98699996785999999999999987-66877088887511234103321347899998620001021021011113776


Q ss_pred             ---CCH-----HHHHHHHCCCCCCEEEEEEEE
Q ss_conf             ---101-----243210001234303643112
Q gi|254780570|r   68 ---REH-----EKAILMQLSSIQPDLICLAGY   91 (205)
Q Consensus        68 ---~~~-----~~~l~~~l~~~~~Dliv~~g~   91 (205)
                         +..     -..+.+..++.+.|.|+++-.
T Consensus       103 ~~~~~~~R~~Ry~~l~~~a~~~~~~~ia~GH~  134 (216)
T d1wy5a1         103 MSLEEAGRFLRYKFLKEILESEGFDCIATAHH  134 (216)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCC
T ss_pred             CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE
T ss_conf             44578799999887641111223121576520


No 21 
>d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=74.03  E-value=1.4  Score=21.47  Aligned_cols=26  Identities=27%  Similarity=0.425  Sum_probs=20.5

Q ss_pred             ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0572132106654231353223332444
Q gi|254780570|r   94 LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        94 il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .++.++++..+..++=+||  ||..||.
T Consensus       101 ~v~~~~l~~ak~~~iimHp--lP~~Rg~  126 (163)
T d1pvva2         101 QVNKDLVKHAKPDYMFMHC--LPAHRGE  126 (163)
T ss_dssp             CBCHHHHHTSCTTCEEEEC--SCCCBTT
T ss_pred             HHHHHHHHHHCCCEEEECC--CCCCCCC
T ss_conf             6878998761877599458--7532564


No 22 
>d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]}
Probab=72.62  E-value=2.9  Score=19.37  Aligned_cols=112  Identities=9%  Similarity=0.015  Sum_probs=55.7

Q ss_pred             CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE-EEEECC-CCCCC----CCHHHHHH
Q ss_conf             65999976985--018999999973999847999997688887888998608950-463013-23322----10124321
Q gi|254780570|r    4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT-FPIPYK-DYISR----REHEKAIL   75 (205)
Q Consensus         4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~-~~i~~~-~~~~~----~~~~~~l~   75 (205)
                      |||+++...+.  .-+..|++++++.+ +++..+|+|...-....+--+..++.. ..++.. +..+.    ...-..+.
T Consensus         3 kkI~~v~GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~~   81 (373)
T d1v4va_           3 KRVVLAFGTRPEATKMAPVYLALRGIP-GLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQAA   81 (373)
T ss_dssp             EEEEEEECSHHHHHHHHHHHHHHHTST-TEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHH
T ss_pred             CEEEEEEEHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH
T ss_conf             769999873697999999999997189-9988999926882556371224088866567878888877899999999876


Q ss_pred             HHCCCCCCEEEEEEEEE-EECCCHHHH-CCCCCEEECCCCCCC
Q ss_conf             00012343036431122-205721321-066542313532233
Q gi|254780570|r   76 MQLSSIQPDLICLAGYM-RLLSRDFVE-SYKNKILNIHPSLLP  116 (205)
Q Consensus        76 ~~l~~~~~Dliv~~g~~-~il~~~~l~-~~~~~~iN~HpslLP  116 (205)
                      +.+.+.+||+|++.|=. -.+..-+.. ..+..++-+|.++..
T Consensus        82 ~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs  124 (373)
T d1v4va_          82 RALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS  124 (373)
T ss_dssp             HHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC
T ss_pred             HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC
T ss_conf             6664037640011136753103778898762122241343455


No 23 
>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}
Probab=71.36  E-value=2  Score=20.52  Aligned_cols=31  Identities=26%  Similarity=0.360  Sum_probs=17.6

Q ss_pred             CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             9866599997698-50189999999739998479999
Q gi|254780570|r    1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      |..+||+|+++|. ||.+-.++-   .+  +.+|.+.
T Consensus         5 ~~m~KI~ViGaG~wGtAlA~~La---~~--g~~V~l~   36 (189)
T d1n1ea2           5 LYLNKAVVFGSGAFGTALAMVLS---KK--CREVCVW   36 (189)
T ss_dssp             CCEEEEEEECCSHHHHHHHHHHH---TT--EEEEEEE
T ss_pred             CEECEEEEECCCHHHHHHHHHHH---HC--CCEEEEE
T ss_conf             10156999998999999999999---75--9968999


No 24 
>d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]}
Probab=69.34  E-value=3.4  Score=18.89  Aligned_cols=93  Identities=19%  Similarity=0.151  Sum_probs=46.9

Q ss_pred             CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             65999976985--0189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +||+||=||-|  |-++.|.+..    .+.++.- +-|+..           .|+=.   +....-..+-.++.+.+.+.
T Consensus         1 mkIgifDSGiGGLtVl~~l~~~l----P~~~~iY-~~D~a~-----------~PYG~---ks~~~I~~~~~~~~~~l~~~   61 (105)
T d1b74a1           1 MKIGIFDSGVGGLTVLKAIRNRY----RKVDIVY-LGDTAR-----------VPYGI---RSKDTIIRYSLECAGFLKDK   61 (105)
T ss_dssp             CEEEEEESSSTHHHHHHHHHHHS----SSCEEEE-EECGGG-----------CCGGG---SCHHHHHHHHHHHHHHHHTT
T ss_pred             CEEEEEECCCCHHHHHHHHHHHC----CCCCEEE-EECCCC-----------CCCCC---CCHHHHHHHHHHHHHHHHHC
T ss_conf             97999838978799999999978----9998799-856887-----------98898---99999999999999999974


Q ss_pred             CCEEEEEEEEEEE---CCCHHHHCCCCCEEE-CCCCCCC
Q ss_conf             4303643112220---572132106654231-3532233
Q gi|254780570|r   82 QPDLICLAGYMRL---LSRDFVESYKNKILN-IHPSLLP  116 (205)
Q Consensus        82 ~~Dliv~~g~~~i---l~~~~l~~~~~~~iN-~HpslLP  116 (205)
                      ++|++|.| .+-.   .-+.+-+.|...+++ +.|+.-|
T Consensus        62 ~~~~iViA-CNTaS~~al~~lr~~~~~PiiGvi~P~ik~   99 (105)
T d1b74a1          62 GVDIIVVA-CNTASAYALERLKKEINVPVFGVIEPGVKE   99 (105)
T ss_dssp             TCSEEEEC-CHHHHHHHHHHHHHHSSSCEEESHHHHHHH
T ss_pred             CCCEEEEE-CCCHHHHHHHHHHHHCCCCEEEEEHHHHHH
T ss_conf             99989980-571789999999987899999932289999


No 25 
>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=64.59  E-value=4.1  Score=18.27  Aligned_cols=35  Identities=23%  Similarity=0.269  Sum_probs=19.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             98665999976985018999999973999847999997
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |..+||+|+. ++|.--.++++.....  +++|.++.-
T Consensus         1 m~~kkIlV~G-atG~iG~~v~~~Ll~~--g~~V~~~~R   35 (205)
T d1hdoa_           1 MAVKKIAIFG-ATGQTGLTTLAQAVQA--GYEVTVLVR   35 (205)
T ss_dssp             CCCCEEEEES-TTSHHHHHHHHHHHHT--TCEEEEEES
T ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHHC--CCEEEEEEC
T ss_conf             9988899999-9878999999999978--698999983


No 26 
>d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]}
Probab=59.65  E-value=5  Score=17.68  Aligned_cols=26  Identities=8%  Similarity=0.369  Sum_probs=15.8

Q ss_pred             CCCEEEEEECCCCH-------HHHHHHHHHHCC
Q ss_conf             86659999769850-------189999999739
Q gi|254780570|r    2 IRKNIVIFISGEGT-------NMLSLIQATKKN   27 (205)
Q Consensus         2 ~k~riavl~SG~Gs-------nl~~Il~~~~~~   27 (205)
                      ||+||+||+-|..+       ..+++.++.+..
T Consensus         1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~   33 (96)
T d1iowa1           1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREG   33 (96)
T ss_dssp             CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC
T ss_conf             984599995757622476886699999999875


No 27 
>d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]}
Probab=58.82  E-value=4.6  Score=17.98  Aligned_cols=24  Identities=29%  Similarity=0.508  Sum_probs=15.9

Q ss_pred             CCCHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf             57213210665423135322333244
Q gi|254780570|r   95 LSRDFVESYKNKILNIHPSLLPLFPG  120 (205)
Q Consensus        95 l~~~~l~~~~~~~iN~HpslLP~yrG  120 (205)
                      +..+.+...+..++=+||  ||.+||
T Consensus        88 ~~~~~~~~~~~~~i~MH~--LP~~Rg  111 (151)
T d2at2a2          88 LTVERAERMKRHAIIMHP--APVNRG  111 (151)
T ss_pred             CHHHHHHHCCCCEEEECC--CCCCCC
T ss_conf             015665422667478247--762447


No 28 
>d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]}
Probab=58.54  E-value=5.2  Score=17.56  Aligned_cols=98  Identities=13%  Similarity=0.166  Sum_probs=47.4

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             66599997698-50189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .+||++.+-++ +..+.+++.+..  .++.++..+++..-...-.......+..+....            .+.+.++  
T Consensus         3 gl~i~~vGD~~~sRv~~Sl~~~l~--~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------d~~eai~--   66 (153)
T d1pg5a2           3 GLVFALLGDLKYARTVNSLLRILT--RFRPKLVYLISPQLLRARKEILDELNYPVKEVE------------NPFEVIN--   66 (153)
T ss_dssp             TCEEEEEECCSSCHHHHHHHHHGG--GSCCSEEEEECCGGGCCCHHHHTTCCSCEEEES------------CGGGTGG--
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--HCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEE------------CHHHHHH--
T ss_conf             999999887876589999999999--869915998256556642121024898289995------------8999963--


Q ss_pred             CCEEEEEEEE----------------EEECCCHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf             4303643112----------------22057213210665423135322333244
Q gi|254780570|r   82 QPDLICLAGY----------------MRLLSRDFVESYKNKILNIHPSLLPLFPG  120 (205)
Q Consensus        82 ~~Dliv~~g~----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG  120 (205)
                      +.|+|..-.|                ...++.++++..+..++=+||  ||  ||
T Consensus        67 ~aDvvy~~~~q~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~i~mH~--LP--R~  117 (153)
T d1pg5a2          67 EVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHP--LP--RV  117 (153)
T ss_dssp             GCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECC--SC--CS
T ss_pred             CCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC--CC--CC
T ss_conf             59868874433101011157777777655568898601788079657--88--76


No 29 
>d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]}
Probab=56.46  E-value=5.5  Score=17.39  Aligned_cols=55  Identities=9%  Similarity=0.136  Sum_probs=31.7

Q ss_pred             CCEEEEEECCCC--H-HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             665999976985--0-189999999739998479999976888878889986089504
Q gi|254780570|r    3 RKNIVIFISGEG--T-NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         3 k~riavl~SG~G--s-nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |+||.+.+.||-  | -++++++....+.+.+.-+++-....+...++..++.||+.-
T Consensus         2 k~~vlFvC~~N~cRS~mAEa~~~~~~~~~~~v~SAG~~~~~v~p~ai~~l~e~Gid~~   59 (130)
T d1jf8a_           2 KKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDIS   59 (130)
T ss_dssp             CEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCCT
T ss_pred             CCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCC
T ss_conf             9879999299817989999999960776605504342234540255677530132223


No 30 
>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}
Probab=56.35  E-value=5.7  Score=17.32  Aligned_cols=55  Identities=18%  Similarity=0.308  Sum_probs=33.5

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEE
Q ss_conf             86659999769850189999999739998479999976888878889986089504630
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIP   60 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~   60 (205)
                      |+.||+|=  |.|+==+.++++....+ +.+++.|---.+ ......+.+++.+.+...
T Consensus         1 M~irIaIN--GfGRIGR~v~Ral~~~~-dieiVaINd~~~-~~~~~~l~~~~~~~~~~~   55 (172)
T d2czca2           1 MKVKVGVN--GYGTIGKRVAYAVTKQD-DMELIGITKTKP-DFEAYRAKELGIPVYAAS   55 (172)
T ss_dssp             CCEEEEEE--CCSHHHHHHHHHHHTCT-TEEEEEEEESSC-SHHHHHHHHTTCCEEESS
T ss_pred             CCEEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEECCCC-HHHHHHHHHCCCEEECCC
T ss_conf             95799998--98788999999997599-965999966997-589987541585022354


No 31 
>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}
Probab=54.39  E-value=6.1  Score=17.10  Aligned_cols=75  Identities=19%  Similarity=0.152  Sum_probs=39.4

Q ss_pred             CCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             6659999769850189-999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +.|+++.  |-|+-.. .++...+.- -.++++.|++.++ ...-+.++++|++...+.  .+.+       +-+.+++-
T Consensus        33 ~iriaiI--G~G~~~~~~~~~~~~~~-~~~~ivav~d~~~-~~a~~~~~~~~i~~~~~~--~~~d-------~~ell~~~   99 (221)
T d1h6da1          33 RFGYAIV--GLGKYALNQILPGFAGC-QHSRIEALVSGNA-EKAKIVAAEYGVDPRKIY--DYSN-------FDKIAKDP   99 (221)
T ss_dssp             CEEEEEE--CCSHHHHHTHHHHTTTC-SSEEEEEEECSCH-HHHHHHHHHTTCCGGGEE--CSSS-------GGGGGGCT
T ss_pred             CEEEEEE--CCCHHHHHHHHHHHHHC-CCCEEEEEECCCH-HHHHHHHHHHCCCCCCCC--CCCC-------HHHHCCCC
T ss_conf             7789999--18399999999999738-9966999962888-999999986301324443--2275-------65521233


Q ss_pred             CCEEEEEEE
Q ss_conf             430364311
Q gi|254780570|r   82 QPDLICLAG   90 (205)
Q Consensus        82 ~~Dliv~~g   90 (205)
                      ++|+|+.+.
T Consensus       100 ~iD~V~I~t  108 (221)
T d1h6da1         100 KIDAVYIIL  108 (221)
T ss_dssp             TCCEEEECS
T ss_pred             CCEEEEECC
T ss_conf             320133123


No 32 
>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=52.94  E-value=6.4  Score=16.95  Aligned_cols=81  Identities=12%  Similarity=0.183  Sum_probs=45.5

Q ss_pred             CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             86659999769850189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ..+|++|+  |.|.-.+.+.++......  . ...++||......+.+++++....  ++.          ++.+.+.  
T Consensus        23 ~~~~ilvi--GaG~~g~~v~~~L~~~g~--~-~i~v~nRt~~ka~~l~~~~~~~~~--~~~----------~~~~~l~--   83 (159)
T d1gpja2          23 HDKTVLVV--GAGEMGKTVAKSLVDRGV--R-AVLVANRTYERAVELARDLGGEAV--RFD----------ELVDHLA--   83 (159)
T ss_dssp             TTCEEEEE--SCCHHHHHHHHHHHHHCC--S-EEEEECSSHHHHHHHHHHHTCEEC--CGG----------GHHHHHH--
T ss_pred             CCCEEEEE--CCCHHHHHHHHHHHHCCC--C-EEEEECCCHHHHHHHHHHHHCCCC--CCH----------HHHHHHC--
T ss_conf             16969998--798899999999996698--5-799975868899998886411434--514----------5787735--


Q ss_pred             CCEEEEEEE--EEEECCCHHHH
Q ss_conf             430364311--22205721321
Q gi|254780570|r   82 QPDLICLAG--YMRLLSRDFVE  101 (205)
Q Consensus        82 ~~Dliv~~g--~~~il~~~~l~  101 (205)
                      +.|+|+++-  -..++.++.++
T Consensus        84 ~~Divi~atss~~~ii~~~~i~  105 (159)
T d1gpja2          84 RSDVVVSATAAPHPVIHVDDVR  105 (159)
T ss_dssp             TCSEEEECCSSSSCCBCHHHHH
T ss_pred             CCCEEEEECCCCCCCCCHHHHH
T ss_conf             4899999248987641276668


No 33 
>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}
Probab=52.75  E-value=6.5  Score=16.93  Aligned_cols=77  Identities=17%  Similarity=0.137  Sum_probs=42.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             665999976985018999999973999847999997688887888----9986089504630132332210124321000
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      ..|+.=+++|.|+++..+.+.      ..++.+|  |- +...++    +++..+++...+...+...          .-
T Consensus        31 ~grvLDiGcG~G~~~~~la~~------g~~v~gv--D~-s~~~l~~a~~~~~~~~~~~~~~~~~d~~~----------~~   91 (198)
T d2i6ga1          31 PGRTLDLGCGNGRNSLYLAAN------GYDVTAW--DK-NPASMANLERIKAAEGLDNLQTDLVDLNT----------LT   91 (198)
T ss_dssp             SCEEEEETCTTSHHHHHHHHT------TCEEEEE--ES-CHHHHHHHHHHHHHTTCTTEEEEECCTTT----------CC
T ss_pred             CCCEEEECCCCCHHHHHHHHH------HHHHCCC--CC-CHHHHHHHHHHHHHCCCCCHHHHHEECCC----------CC
T ss_conf             995999889997889998987------6654035--67-67889999997542233320022100014----------45


Q ss_pred             CCCCCEEEEEEEEEEECCCH
Q ss_conf             12343036431122205721
Q gi|254780570|r   79 SSIQPDLICLAGYMRLLSRD   98 (205)
Q Consensus        79 ~~~~~Dliv~~g~~~il~~~   98 (205)
                      -....|+|++......+|++
T Consensus        92 ~~~~fD~I~~~~~~~~~~~~  111 (198)
T d2i6ga1          92 FDGEYDFILSTVVMMFLEAQ  111 (198)
T ss_dssp             CCCCEEEEEEESCGGGSCTT
T ss_pred             CCCCCCEEEEEEEEECCCHH
T ss_conf             46654599982030108888


No 34 
>d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]}
Probab=51.13  E-value=6.8  Score=16.76  Aligned_cols=52  Identities=23%  Similarity=0.263  Sum_probs=21.3

Q ss_pred             CCCHHHHHHHH-HHHCCCCCCEEEEEEECCC------CCHH-HHHHHH-----CCCCEEEEECCCCC
Q ss_conf             98501899999-9973999847999997688------8878-889986-----08950463013233
Q gi|254780570|r   12 GEGTNMLSLIQ-ATKKNDYPAEIVGVFSDNS------NAQG-LVKARK-----EKVPTFPIPYKDYI   65 (205)
Q Consensus        12 G~Gsnl~~Il~-~~~~~~~~~eI~~Visn~~------da~~-l~~a~~-----~~Ip~~~i~~~~~~   65 (205)
                      |...||..-|+ .....  +-++..|+|-..      |-.+ ...+++     .++|+..++...|.
T Consensus       124 GG~~~L~~~i~~~~~~~--~P~~I~V~tTC~~eiIGDDl~~vi~~~~~~~~~~~~~pvi~v~tpgF~  188 (519)
T d1qh8b_         124 GGNNNMNLGLQNASALY--KPEIIAVSTTCMAEVIGDDLQAFIANAKKDGFVDSSIAVPHAHTPSFI  188 (519)
T ss_dssp             CSHHHHHHHHHHHHHHH--CCSEEEEEECHHHHHHTCCHHHHHHHHHHTTSSCTTSBCCBCCCCTTS
T ss_pred             CCHHHHHHHHHHHHHHC--CCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC
T ss_conf             84888999999999854--997899946777401777999999999873477789648998579863


No 35 
>d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]}
Probab=49.32  E-value=7.3  Score=16.57  Aligned_cols=100  Identities=15%  Similarity=0.192  Sum_probs=43.2

Q ss_pred             CEEEEEECCCCH-----HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH--------------HHHCCCCEEEEECCCC
Q ss_conf             659999769850-----189999999739998479999976888878889--------------9860895046301323
Q gi|254780570|r    4 KNIVIFISGEGT-----NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK--------------ARKEKVPTFPIPYKDY   64 (205)
Q Consensus         4 ~riavl~SG~Gs-----nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~--------------a~~~~Ip~~~i~~~~~   64 (205)
                      |||+|+.||+-+     .+..++++....  +.+|.++.   ..-.|+-.              ...-|-....-..+.+
T Consensus         2 krIaIl~sGG~~pgiNa~i~~~v~~~~~~--~~~v~g~~---~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~   76 (319)
T d4pfka_           2 KRIGVLTSGGDSPGMNAAIRSVVRKAIYH--GVEVYGVY---HGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEF   76 (319)
T ss_dssp             CEEEEEEESSCCTTHHHHHHHHHHHHHHT--TCEEEEES---SHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTS
T ss_pred             CEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC---CCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf             88999876887689999999999999877--99999983---16687567995159989998798648630035888865


Q ss_pred             CCCCCHHHHHHHHCCCCCCEEEEEE-EEEEECCCHHHHCCCCCEEE
Q ss_conf             3221012432100012343036431-12220572132106654231
Q gi|254780570|r   65 ISRREHEKAILMQLSSIQPDLICLA-GYMRLLSRDFVESYKNKILN  109 (205)
Q Consensus        65 ~~~~~~~~~l~~~l~~~~~Dliv~~-g~~~il~~~~l~~~~~~~iN  109 (205)
                      .+ ++.-+++.+.+++++.|.++.. |-...=....+..+...++.
T Consensus        77 ~~-~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~~~~vvg  121 (319)
T d4pfka_          77 KT-EEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPCVG  121 (319)
T ss_dssp             SS-HHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCCEEE
T ss_pred             CC-CCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEE
T ss_conf             54-1004469999998336638995383689999998733675552


No 36 
>d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]}
Probab=48.27  E-value=7.6  Score=16.46  Aligned_cols=39  Identities=10%  Similarity=0.258  Sum_probs=27.8

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .+.++.+++|.| +-+.++++...+...+.+|.++.+++.
T Consensus         5 ~rplv~IagGtGiaP~~s~l~~~~~~~~~~~v~l~~~~r~   44 (135)
T d1qfja2           5 ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGRE   44 (135)
T ss_dssp             SSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEESS
T ss_pred             CCCEEEEECCEEHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             9989999886259999999999997064565368971166


No 37 
>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}
Probab=48.15  E-value=7.6  Score=16.45  Aligned_cols=47  Identities=13%  Similarity=0.208  Sum_probs=26.1

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC
Q ss_conf             6659999769850189999999739998479999976888878889986089
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV   54 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I   54 (205)
                      .+|++||  |.|...++++.+..+.... +|  .+.||....+...++..+.
T Consensus        17 ~~~vlIl--GaGGaarai~~aL~~~g~~-~I--~I~nR~~~ka~~L~~~~~~   63 (167)
T d1npya1          17 NAKVIVH--GSGGMAKAVVAAFKNSGFE-KL--KIYARNVKTGQYLAALYGY   63 (167)
T ss_dssp             TSCEEEE--CSSTTHHHHHHHHHHTTCC-CE--EEECSCHHHHHHHHHHHTC
T ss_pred             CCEEEEE--CCCHHHHHHHHHHHHCCCC-EE--EEECCCHHHHHHHHHHHHH
T ss_conf             9969998--9878999999999977998-89--9963327888878876432


No 38 
>d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]}
Probab=47.95  E-value=7.5  Score=16.48  Aligned_cols=12  Identities=25%  Similarity=0.255  Sum_probs=6.1

Q ss_pred             CCCCCHHCCCCC
Q ss_conf             212100002465
Q gi|254780570|r  122 HTHRRVLQSGIK  133 (205)
Q Consensus       122 ~~~~~ai~~g~~  133 (205)
                      .++..++.+||.
T Consensus       196 ~~~~~m~~~~d~  207 (208)
T d1ybha3         196 GTFNDVITEGDG  207 (208)
T ss_dssp             CCGGGCBCSCCC
T ss_pred             CCHHHHHHCCCC
T ss_conf             899999535589


No 39 
>d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=47.42  E-value=7.3  Score=16.58  Aligned_cols=25  Identities=12%  Similarity=0.260  Sum_probs=16.3

Q ss_pred             CCCCEEEEEEC--CCCHHHHHHHHHHH
Q ss_conf             98665999976--98501899999997
Q gi|254780570|r    1 MIRKNIVIFIS--GEGTNMLSLIQATK   25 (205)
Q Consensus         1 M~k~riavl~S--G~Gsnl~~Il~~~~   25 (205)
                      |.++||+|+.-  |+-..|+++++...
T Consensus         1 m~~~kI~viSD~Hgn~~al~~vl~~~~   27 (173)
T d3ck2a1           1 MAKQTIIVMSDSHGDSLIVEEVRDRYV   27 (173)
T ss_dssp             CCCEEEEEECCCTTCHHHHHHHHHHHT
T ss_pred             CCCCEEEEEECCCCCHHHHHHHHHHHH
T ss_conf             998899999636899799999999865


No 40 
>d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=46.58  E-value=6.2  Score=17.04  Aligned_cols=49  Identities=16%  Similarity=0.060  Sum_probs=32.4

Q ss_pred             CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             6599997698501899999997399984799999768888788899860895046
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      .|+++.  |.|+.-.+|+.+.... ..+++++.+-++|...|.   .-+|+|++.
T Consensus         4 ~~v~I~--GaG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~---~I~Gi~V~~   52 (126)
T d2dt5a2           4 WGLCIV--GMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGR---PVRGGVIEH   52 (126)
T ss_dssp             EEEEEE--CCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTC---EETTEEEEE
T ss_pred             CEEEEE--CCCHHHHHHHHHHHHC-CCCEEEEEEECCHHHCCC---EECCEEEEC
T ss_conf             629999--6899999999727546-995799999086575497---989999914


No 41 
>d2hzba1 c.143.1.1 (A:2-312) Hypothetical protein BH3568 {Bacillus halodurans [TaxId: 86665]}
Probab=45.93  E-value=8.2  Score=16.22  Aligned_cols=32  Identities=34%  Similarity=0.774  Sum_probs=23.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             665999976985018999999973999847999997
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |++|++|  |+||.+..+++..+.  .+.+++.|++
T Consensus         2 ~~~Iv~l--~GGtG~~~ll~gl~~--~~~~lt~IVn   33 (311)
T d2hzba1           2 KKNVVVF--GGGTGLSVLLRGLKT--FPVSITAIVT   33 (311)
T ss_dssp             CEEEEEE--CCHHHHHHHHHHHTT--SSEEEEEEEC
T ss_pred             CCCEEEE--CCCCCHHHHHHHHHH--CCCCEEEEEE
T ss_conf             8768998--785248999999974--7998599997


No 42 
>d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]}
Probab=45.79  E-value=8.2  Score=16.21  Aligned_cols=22  Identities=18%  Similarity=0.066  Sum_probs=10.2

Q ss_pred             HHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             9999999739998479999976888
Q gi|254780570|r   18 LSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus        18 ~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      ..+++..++.  +++| .++||++.
T Consensus        42 ~~~l~~l~~~--G~~I-ii~T~R~~   63 (149)
T d1ltqa1          42 VELSKMYALM--GYQI-VVVSGRES   63 (149)
T ss_dssp             HHHHHHHHHT--TCEE-EEEECSCC
T ss_pred             HHHHHHHHHC--CCEE-EEEECCCH
T ss_conf             9999999844--4808-99926857


No 43 
>d3euga_ c.18.1.1 (A:) Uracil-DNA glycosylase {Escherichia coli [TaxId: 562]}
Probab=45.17  E-value=3.4  Score=18.82  Aligned_cols=53  Identities=13%  Similarity=0.298  Sum_probs=30.2

Q ss_pred             CCHHHHHHHHCCCCCCEEEEEEEEEEEC--CCHHHHCCCCCEE-ECCCCCCCCCCCC
Q ss_conf             1012432100012343036431122205--7213210665423-1353223332444
Q gi|254780570|r   68 REHEKAILMQLSSIQPDLICLAGYMRLL--SRDFVESYKNKIL-NIHPSLLPLFPGL  121 (205)
Q Consensus        68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il--~~~~l~~~~~~~i-N~HpslLP~yrG~  121 (205)
                      +.|.+.+++.|.+.+..+|.+. |+.--  -..+++.-+.-+| --|||.|-.|||.
T Consensus       138 e~ft~~ii~~l~~~~~~vvfiL-wG~~A~~~~~~i~~~~h~il~s~HPSPlsa~rgF  193 (225)
T d3euga_         138 ETFTDKVISLINQHREGVVFLL-WGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGF  193 (225)
T ss_dssp             HHHHHHHHHHHHHHCSSCEEEE-ESHHHHHHTTTSCTTTSEEEEECCSSTTTGGGTT
T ss_pred             HHHHHHHHHHHHCCCCCEEEEE-EEEHHHHHHHHHCCCCCEEEEECCCCHHHCCCCC
T ss_conf             9999999999973677859998-6130667776515678769982799822148998


No 44 
>d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=44.04  E-value=8.7  Score=16.03  Aligned_cols=32  Identities=16%  Similarity=0.328  Sum_probs=21.9

Q ss_pred             CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEEC
Q ss_conf             66599997698-50-189999999739998479999976
Q gi|254780570|r    3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSD   39 (205)
Q Consensus         3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn   39 (205)
                      |+||+|-+||+ .| .|..++..     ...++.++..+
T Consensus         1 K~KIvvalSGGvDS~vl~~lL~~-----~~~~v~a~~~~   34 (168)
T d1vl2a1           1 KEKVVLAYSGGLDTSVILKWLCE-----KGFDVIAYVAN   34 (168)
T ss_dssp             CCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEEEE
T ss_pred             CCEEEEEECCHHHHHHHHHHHHH-----CCCEEEEEECC
T ss_conf             98899996268889999999998-----69969999802


No 45 
>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}
Probab=43.73  E-value=8.8  Score=16.00  Aligned_cols=51  Identities=14%  Similarity=0.104  Sum_probs=29.2

Q ss_pred             CCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE
Q ss_conf             665999976985018-9999999739998479999976888878889986089504
Q gi|254780570|r    3 RKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         3 k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~   57 (205)
                      |.|++|.+  .|+-. ...+.+.+.. -+++++.|++.++ ....+.+++++++++
T Consensus         1 Kiri~iIG--~G~~g~~~~~~~l~~~-~~~~i~~v~d~~~-~~~~~~~~~~~~~~~   52 (164)
T d1tlta1           1 KLRIGVVG--LGGIAQKAWLPVLAAA-SDWTLQGAWSPTR-AKALPICESWRIPYA   52 (164)
T ss_dssp             CEEEEEEC--CSTHHHHTHHHHHHSC-SSEEEEEEECSSC-TTHHHHHHHHTCCBC
T ss_pred             CCEEEEEC--CCHHHHHHHHHHHHHC-CCCEEEEEEECHH-HHHHHHHHCCCCCCC
T ss_conf             97999995--9899999999999858-9968999993306-766665420233435


No 46 
>d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]}
Probab=43.16  E-value=6.9  Score=16.72  Aligned_cols=34  Identities=9%  Similarity=0.095  Sum_probs=20.6

Q ss_pred             CCCEEEEEEC--CCCHHHHHHHHHHHCCCCCCEEEEEE
Q ss_conf             8665999976--98501899999997399984799999
Q gi|254780570|r    2 IRKNIVIFIS--GEGTNMLSLIQATKKNDYPAEIVGVF   37 (205)
Q Consensus         2 ~k~riavl~S--G~Gsnl~~Il~~~~~~~~~~eI~~Vi   37 (205)
                      |++||+++.-  ++=..++.|++...+.+.  +.+++.
T Consensus         1 ~~~ri~~isD~h~~~~~l~~l~~~~~~~~~--D~vli~   36 (257)
T d2yvta1           1 MPRKVLAIKNFKERFDLLPKLKGVIAEKQP--DILVVV   36 (257)
T ss_dssp             CCCEEEEEECCTTCGGGHHHHHHHHHHHCC--SEEEEE
T ss_pred             CCCEEEEEECCCCCHHHHHHHHHHHHHCCC--CEEEEE
T ss_conf             984899994899997899999998856599--999991


No 47 
>d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]}
Probab=42.60  E-value=9.2  Score=15.88  Aligned_cols=40  Identities=18%  Similarity=0.406  Sum_probs=27.1

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             665999976985-0189999999739998479999976888
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      ++.++.++.|.| +-+.++++...+.....+|.++.+++..
T Consensus         5 ~rplv~IAgG~GItP~~s~l~~~~~~~~~~~i~l~~~~r~~   45 (133)
T d1krha2           5 KRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLVFGVTQD   45 (133)
T ss_dssp             SSCEEEEEEGGGHHHHHHHHHHHHHHCCSSCEEEEEEESSG
T ss_pred             CCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH
T ss_conf             99799999458299999999999984999966899862106


No 48 
>d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]}
Probab=42.38  E-value=3.3  Score=18.97  Aligned_cols=12  Identities=42%  Similarity=0.573  Sum_probs=9.9

Q ss_pred             CEEECCCCCCCC
Q ss_conf             423135322333
Q gi|254780570|r  106 KILNIHPSLLPL  117 (205)
Q Consensus       106 ~~iN~HpslLP~  117 (205)
                      -+=|+||+|||+
T Consensus        95 v~P~Ih~~Llpk  106 (106)
T d1tzya_          95 VLPNIQAVLLPK  106 (106)
T ss_dssp             CCCCCCGGGSCC
T ss_pred             CCCCCCHHHCCC
T ss_conf             267517865698


No 49 
>d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]}
Probab=42.19  E-value=9.3  Score=15.84  Aligned_cols=38  Identities=18%  Similarity=0.243  Sum_probs=28.2

Q ss_pred             CEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             65999976985-018999999973999847999997688
Q gi|254780570|r    4 KNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         4 ~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      ++++.++.|.| +-+.++++.....+....+.++.+.+.
T Consensus         7 k~lvlIa~GtGiaP~~s~l~~~~~~~~~~~v~l~~g~r~   45 (148)
T d1fdra2           7 ETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHAARY   45 (148)
T ss_dssp             SEEEEEEEGGGGHHHHHHHHHCCSCTTCSEEEEEEEESS
T ss_pred             CEEEEEECCEEHHHHHHHHHHHHHHCCCCCEEEEEECCC
T ss_conf             879999767579999999999998379975899994186


No 50 
>d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]}
Probab=42.15  E-value=9.3  Score=15.84  Aligned_cols=84  Identities=15%  Similarity=0.082  Sum_probs=42.9

Q ss_pred             CCCEEEEEECCCCHHH--------------------HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC
Q ss_conf             8665999976985018--------------------99999997399984799999768888788899860895046301
Q gi|254780570|r    2 IRKNIVIFISGEGTNM--------------------LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY   61 (205)
Q Consensus         2 ~k~riavl~SG~Gsnl--------------------~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~   61 (205)
                      ||+|.+||+.|.||=|                    +.+++......++ +|. |+++......-...+++++.....+.
T Consensus         2 m~mkaiIlaaG~GtRl~p~t~~~pK~ll~i~gkpli~~~i~~l~~~g~~-~i~-iv~g~~~e~i~~~~~~~~i~i~~~~~   79 (229)
T d1jyka_           2 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGIN-DII-IIVGYLKEQFDYLKEKYGVRLVFNDK   79 (229)
T ss_dssp             CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCC-CEE-EEECTTGGGGTHHHHHHCCEEEECTT
T ss_pred             CCEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHCCC-CCC-CCCCCCHHHHHHHHHHCCCCCCCCCC
T ss_conf             8424999899775347830059984120799878999999999872876-543-41354411344542201213222222


Q ss_pred             CCCCCCCCHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             32332210124321000123430364311
Q gi|254780570|r   62 KDYISRREHEKAILMQLSSIQPDLICLAG   90 (205)
Q Consensus        62 ~~~~~~~~~~~~l~~~l~~~~~Dliv~~g   90 (205)
                      ....   ..-..+....+..+-+++++++
T Consensus        80 ~~~~---Gt~~sl~~a~~~l~~~~ii~~d  105 (229)
T d1jyka_          80 YADY---NNFYSLYLVKEELANSYVIDAD  105 (229)
T ss_dssp             TTTS---CTHHHHHTTGGGCTTEEEEETT
T ss_pred             CCCC---CCCCCCCCCHHHHCCCCCCCCC
T ss_conf             1123---3333321101221212013235


No 51 
>d2j8xa1 c.18.1.1 (A:26-255) Uracil-DNA glycosylase {Epstein-Barr virus [TaxId: 10376]}
Probab=40.95  E-value=6.6  Score=16.89  Aligned_cols=92  Identities=13%  Similarity=0.066  Sum_probs=43.4

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE----EEECCCCCCC-----CCHHHHHHHHCCCCCCEEE
Q ss_conf             189999999739998479999976888878889986089504----6301323322-----1012432100012343036
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF----PIPYKDYISR-----REHEKAILMQLSSIQPDLI   86 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~----~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli   86 (205)
                      .|++|++.....-...       ..+..+.++.-.+.||=..    ++......+.     +.|.+.+++.|.+.+..+|
T Consensus        89 SL~NI~kel~~d~~~~-------~~~~~g~L~~Wa~QGVLLLN~~LTv~~g~~~SH~~~gWe~ft~~~i~~l~~~~~~vV  161 (230)
T d2j8xa1          89 SLRNIYAELHRSLPEF-------SPPDHGCLDAWASQGVLLLNTILTVQKGKPGSHADIGWAWFTDHVISLLSERLKACV  161 (230)
T ss_dssp             HHHHHHHHHHHHCTTC-------CCCSSCCCHHHHTTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSCE
T ss_pred             CHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE
T ss_conf             2999999998645788-------877789868996388776630367747999983334748899999999972778879


Q ss_pred             EEEEEEE---ECCCHHHHCCCCCEE-ECCCCCCC
Q ss_conf             4311222---057213210665423-13532233
Q gi|254780570|r   87 CLAGYMR---LLSRDFVESYKNKIL-NIHPSLLP  116 (205)
Q Consensus        87 v~~g~~~---il~~~~l~~~~~~~i-N~HpslLP  116 (205)
                      ++. |+.   .+ ..+++.-+..++ --|||.|-
T Consensus       162 fiL-WG~~A~~~-~~~i~~~~h~Il~s~HPSPls  193 (230)
T d2j8xa1         162 FML-WGAKAGDK-ASLINSKKHLVLTSQHPSPLA  193 (230)
T ss_dssp             EEE-ESHHHHGG-GGGSCTTTSEEEEECCSSGGG
T ss_pred             EEE-ECCHHHHH-HHHCCCCCCEEEECCCCCCCC
T ss_conf             984-01446666-653157787699678999422


No 52 
>d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]}
Probab=40.90  E-value=9.7  Score=15.71  Aligned_cols=39  Identities=13%  Similarity=0.267  Sum_probs=25.7

Q ss_pred             CCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCC
Q ss_conf             6659999769850-------189999999739998479999976888
Q gi|254780570|r    3 RKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSN   42 (205)
Q Consensus         3 k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~d   42 (205)
                      ||||+|++-|..+       .+++++++..... ++++..+..++..
T Consensus         1 Kk~Iavl~GG~S~EheVSl~Sa~~v~~~L~~~~-~y~v~~i~i~k~g   46 (132)
T d1ehia1           1 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIAQNG   46 (132)
T ss_dssp             CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEECTTS
T ss_pred             CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC-CEEEEEEEECCCC
T ss_conf             978999868685004889997999998651338-6268999775775


No 53 
>d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]}
Probab=38.75  E-value=10  Score=15.49  Aligned_cols=54  Identities=13%  Similarity=0.165  Sum_probs=27.3

Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEEEECCC------CCHHH-H-HHHHCCCCEEEEECCCCC
Q ss_conf             985018999999973999847999997688------88788-8-998608950463013233
Q gi|254780570|r   12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNS------NAQGL-V-KARKEKVPTFPIPYKDYI   65 (205)
Q Consensus        12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~------da~~l-~-~a~~~~Ip~~~i~~~~~~   65 (205)
                      |...+|+..++.....-.+.+...|+|..+      |-.++ + ..++.++|...++-..|.
T Consensus       123 GG~~kL~~~I~ei~~~~~~pk~I~V~sTC~~~lIGDDi~~v~~~~~~~~~~~Vi~v~t~Gf~  184 (477)
T d1m1na_         123 GGDKKLAKLIDEVETLFPLNKGISVQSECPIGLIGDDIESVSKVKGAELSKTIVPVRCEGFR  184 (477)
T ss_dssp             CSHHHHHHHHHHHHHHCTTCCCEEEEECTHHHHHTCCHHHHHHHHHHHHTCCEEEECCCTTS
T ss_pred             CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCCC
T ss_conf             84888999999999848998789997886799986389999999888738947999668756


No 54 
>d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]}
Probab=38.53  E-value=11  Score=15.47  Aligned_cols=31  Identities=19%  Similarity=0.153  Sum_probs=17.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE
Q ss_conf             665999976985018999999973999847999
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVG   35 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~   35 (205)
                      .+||++++-+...-+.+++.+...  +++++.+
T Consensus         3 g~ki~~vGD~~nnV~~Sli~~~~~--~g~~i~~   33 (161)
T d1vlva2           3 GVKVVFMGDTRNNVATSLMIACAK--MGMNFVA   33 (161)
T ss_dssp             TCEEEEESCTTSHHHHHHHHHHHH--TTCEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEE
T ss_conf             999999927856899999999998--5997999


No 55 
>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=37.72  E-value=11  Score=15.38  Aligned_cols=19  Identities=16%  Similarity=0.240  Sum_probs=13.5

Q ss_pred             CEEEEEECCC-CHHHHHHHH
Q ss_conf             6599997698-501899999
Q gi|254780570|r    4 KNIVIFISGE-GTNMLSLIQ   22 (205)
Q Consensus         4 ~riavl~SG~-Gsnl~~Il~   22 (205)
                      +||+|+++|. ||.+-..+-
T Consensus         1 MkI~ViGaG~~GtalA~~la   20 (180)
T d1txga2           1 MIVSILGAGAMGSALSVPLV   20 (180)
T ss_dssp             CEEEEESCCHHHHHHHHHHH
T ss_pred             CEEEEECCCHHHHHHHHHHH
T ss_conf             98999997999999999999


No 56 
>d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=37.49  E-value=4.3  Score=18.13  Aligned_cols=12  Identities=50%  Similarity=0.739  Sum_probs=9.9

Q ss_pred             CEEECCCCCCCC
Q ss_conf             423135322333
Q gi|254780570|r  106 KILNIHPSLLPL  117 (205)
Q Consensus       106 ~~iN~HpslLP~  117 (205)
                      -+=|+||+|||+
T Consensus        94 v~p~Ih~~Ll~k  105 (106)
T d1u35c1          94 VLPNIHPELLAK  105 (106)
T ss_dssp             CCCCCCGGGSCC
T ss_pred             CCCCCCHHHCCC
T ss_conf             257738876389


No 57 
>d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]}
Probab=36.95  E-value=11  Score=15.30  Aligned_cols=89  Identities=19%  Similarity=0.209  Sum_probs=56.2

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             66599997698501899999997399984799999768888--------7888998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ..++++|+-|++|.-.+|.+....|-+..++      ++|-        ..|.-|.++.+++...  .|..+...|-+..
T Consensus        59 P~N~g~~gkGn~s~~~~l~eqi~aGa~GlKi------HEDwGatp~~Id~~L~vad~~dvqv~iH--tDtlNE~Gfve~T  130 (389)
T d1e9yb2          59 SMNLGFLAKGNASNDASLADQIEAGAIGFKI------HEDWGTTPSAINHALDVADKYDVQVAIH--TDTLNEAGCVEDT  130 (389)
T ss_dssp             SSEEEEEEECCCSCHHHHHHHHHTTCSEEEE------CGGGCCCHHHHHHHHHHHHHTTCEEEEC--CCTTCSSCCHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHCCCEEEC------CCCCCCCHHHHHHHHHHHHHHCCEEEEC--CCCCCCCCCHHHH
T ss_conf             7253662116779837899999723032202------3102678788889999877509538943--8976654303648


Q ss_pred             HHHCC--------------CCCCEEEEEEEEEEECCCHH
Q ss_conf             10001--------------23430364311222057213
Q gi|254780570|r   75 LMQLS--------------SIQPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~   99 (205)
                      +..+.              .+.||++.++|+.-+||.+-
T Consensus       131 ~~a~~gRtiH~~HtEGaGGGHAPDii~~~~~~nvLpsST  169 (389)
T d1e9yb2         131 MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAST  169 (389)
T ss_dssp             HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEEC
T ss_pred             HHHHCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf             998679752003137777777617888705777667889


No 58 
>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}
Probab=36.26  E-value=11  Score=15.23  Aligned_cols=74  Identities=9%  Similarity=0.014  Sum_probs=36.9

Q ss_pred             CEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             659999769850--189999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    4 KNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         4 ~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      .|+++.+-|..+  -...-+.+..+..-.+++++|.+ +.....-+.+++++++....    +.   .+    .+.+.+.
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d-~~~~~~~~~~~~~~~~~~~~----~~---~~----~~l~~~~   84 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN-PTLKSSLQTIEQLQLKHATG----FD---SL----ESFAQYK   84 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC-SCHHHHHHHHHHTTCTTCEE----ES---CH----HHHHHCT
T ss_pred             EEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC-CCHHHHHHHHHHCCCCCCEE----EC---CH----HHCCCCC
T ss_conf             0899996686340899999999984699859999991-99999999998603665236----43---52----2301112


Q ss_pred             CCEEEEEE
Q ss_conf             43036431
Q gi|254780570|r   82 QPDLICLA   89 (205)
Q Consensus        82 ~~Dliv~~   89 (205)
                      ++|+|+.+
T Consensus        85 ~iD~V~i~   92 (237)
T d2nvwa1          85 DIDMIVVS   92 (237)
T ss_dssp             TCSEEEEC
T ss_pred             CCCEEECC
T ss_conf             21011025


No 59 
>d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]}
Probab=36.21  E-value=3.2  Score=19.03  Aligned_cols=52  Identities=17%  Similarity=0.119  Sum_probs=30.2

Q ss_pred             CCCEEEEEEECCCCCHHHHHHH----HCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE
Q ss_conf             9847999997688887888998----6089504630132332210124321000123430364
Q gi|254780570|r   29 YPAEIVGVFSDNSNAQGLVKAR----KEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC   87 (205)
Q Consensus        29 ~~~eI~~Visn~~da~~l~~a~----~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv   87 (205)
                      ++-+.+.++|-|+-++|=..|+    ..|||+.++.-...  +..     .+.+++....+|+
T Consensus        62 ~~pDf~i~isPN~a~PGP~~ARE~l~~~giP~ivI~D~p~--~k~-----~d~~~~~gfGYIi  117 (282)
T d1u6ka1          62 FEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG--LKV-----KDEMEEQGLGYIL  117 (282)
T ss_dssp             HCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG--GGG-----HHHHHHTTCEEEE
T ss_pred             CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCCC--HHH-----HHHHHHCCCCEEE
T ss_conf             1999899978988899957799999756998799758852--546-----8999865885799


No 60 
>d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]}
Probab=34.61  E-value=12  Score=15.05  Aligned_cols=39  Identities=28%  Similarity=0.433  Sum_probs=27.9

Q ss_pred             CEEEEEECCCC-HHHHHHHHHHHCC-CCCCEEEEEEECCCC
Q ss_conf             65999976985-0189999999739-998479999976888
Q gi|254780570|r    4 KNIVIFISGEG-TNMLSLIQATKKN-DYPAEIVGVFSDNSN   42 (205)
Q Consensus         4 ~riavl~SG~G-snl~~Il~~~~~~-~~~~eI~~Visn~~d   42 (205)
                      |+|++++.|.| +-+.+++++..+. ...-.+.++.+++..
T Consensus        19 k~i~lIagGtGItP~~s~l~~~l~~~~~~~~i~L~~~~r~~   59 (147)
T d1umka2          19 KSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE   59 (147)
T ss_dssp             SEEEEEEEGGGHHHHHHHHHHHHTCTTCCCEEEEEEEESSG
T ss_pred             CEEEEEECCEECCHHHHHHHHHHHCCCCCCEEEEEEEECCC
T ss_conf             76999978853165899999999668998559999983765


No 61 
>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}
Probab=34.35  E-value=12  Score=15.03  Aligned_cols=46  Identities=15%  Similarity=0.208  Sum_probs=24.4

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE
Q ss_conf             66599997698-5018999999973999847999997688887888998608950
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT   56 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~   56 (205)
                      .||++|+..|+ |+.+-..+..  .   .++|.++  ++. ..-.+..++.+...
T Consensus         1 sk~iaIiGaG~~G~~~A~~l~~--~---G~~V~~~--~r~-~~~~~~~~~~~~~~   47 (184)
T d1bg6a2           1 SKTYAVLGLGNGGHAFAAYLAL--K---GQSVLAW--DID-AQRIKEIQDRGAII   47 (184)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHH--T---TCEEEEE--CSC-HHHHHHHHHHTSEE
T ss_pred             CCEEEEECCCHHHHHHHHHHHH--C---CCEEEEE--ECC-HHHHHHHHHCCCCC
T ss_conf             9989998966999999999998--8---9979999--899-99999999769985


No 62 
>d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=34.06  E-value=12  Score=15.00  Aligned_cols=110  Identities=14%  Similarity=0.116  Sum_probs=53.5

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEEC---CCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC
Q ss_conf             66599997698-50189999999739998479999976---888878889986089504630132332210124321000
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSD---NSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL   78 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn---~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l   78 (205)
                      +.+|++.+-++ +..+.+++....  .++.....+++-   .++....+.++..+......+.-            .+.+
T Consensus         4 gl~i~~vGD~~nsrv~~Sli~~l~--~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~------------~~a~   69 (160)
T d1ekxa2           4 NLHVAMVGDLKYGRTVHSLTQALA--KFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSI------------EEVM   69 (160)
T ss_dssp             SCEEEEESCTTTCHHHHHHHHHHT--TSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCS------------TTTG
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--HCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCH------------HHHH
T ss_conf             999999867886689999999999--82997288606401214689999986520456311699------------9982


Q ss_pred             CCCCCEEEEEEEE---------------EEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEC
Q ss_conf             1234303643112---------------2205721321066542313532233324442121000024653445303312
Q gi|254780570|r   79 SSIQPDLICLAGY---------------MRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVT  143 (205)
Q Consensus        79 ~~~~~Dliv~~g~---------------~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~  143 (205)
                      .+  .|++..-.|               .+.+.+++++..+..++=+||  ||  ||           +        .|+
T Consensus        70 ~~--aDvvy~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~mHc--LP--Rg-----------~--------EI~  124 (160)
T d1ekxa2          70 AE--VDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHP--LP--RV-----------D--------EIA  124 (160)
T ss_dssp             GG--CSEEEECCCCGGGCCGGGGGGCSCSCCBCGGGGTTCCTTCEEECC--SC--CS-----------S--------SBC
T ss_pred             CC--CCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECC--CC--CC-----------C--------CCC
T ss_conf             76--856886235433311677777777764139999753766265247--77--57-----------7--------525


Q ss_pred             CCCCCCCE
Q ss_conf             32186626
Q gi|254780570|r  144 ANMDEGPI  151 (205)
Q Consensus       144 ~~~D~G~I  151 (205)
                      +++|.||=
T Consensus       125 ~~V~~~~~  132 (160)
T d1ekxa2         125 TDVDKTPH  132 (160)
T ss_dssp             GGGTTSTT
T ss_pred             HHHHCCCC
T ss_conf             32215763


No 63 
>d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]}
Probab=34.02  E-value=12  Score=14.99  Aligned_cols=16  Identities=19%  Similarity=0.098  Sum_probs=10.0

Q ss_pred             HHHHHHCCCCEEEEEC
Q ss_conf             8899860895046301
Q gi|254780570|r   46 LVKARKEKVPTFPIPY   61 (205)
Q Consensus        46 l~~a~~~~Ip~~~i~~   61 (205)
                      ...|...++|...+..
T Consensus        66 ~~iA~~L~~p~v~~Rk   81 (191)
T d1y0ba1          66 VMTGLKLGVPVVFARK   81 (191)
T ss_dssp             HHHHHHHTCCEEEEBS
T ss_pred             HHHHHHCCCEEEEEEE
T ss_conf             9998632503899996


No 64 
>d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]}
Probab=32.83  E-value=13  Score=14.86  Aligned_cols=145  Identities=16%  Similarity=0.212  Sum_probs=65.8

Q ss_pred             CCEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             665999976--985--01899999997399984799999768888788----8998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ++++..|+-  |.|  |.+-.|-.+++..  +..|.+|-+|.--..+.    .+|+..++|++..+.........++.  
T Consensus         5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~--   80 (207)
T d1okkd2           5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNL--GKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDA--   80 (207)
T ss_dssp             SSSEEEEECSTTSSHHHHHHHHHHHHHTT--TCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHH--
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH--
T ss_conf             97799998999998899999999999977--99079998136665402667640545682389616774278899998--


Q ss_pred             HHHCCCCCCEEEE--EEEEEEECCCHHHHCCCC--CE---------EECCCCCCCCCCCCCCCCCHHCC--CCCCCCCCE
Q ss_conf             1000123430364--311222057213210665--42---------31353223332444212100002--465344530
Q gi|254780570|r   75 LMQLSSIQPDLIC--LAGYMRLLSRDFVESYKN--KI---------LNIHPSLLPLFPGLHTHRRVLQS--GIKITGCTV  139 (205)
Q Consensus        75 ~~~l~~~~~Dliv--~~g~~~il~~~~l~~~~~--~~---------iN~HpslLP~yrG~~~~~~ai~~--g~~~~G~Ti  139 (205)
                      ....+..+.|+|+  .+|.++.-+. .++..+.  +.         ...|-- |+.-.|......+...  ....+|+-+
T Consensus        81 ~~~~~~~~~d~ilIDTaGr~~~d~~-l~~el~~~~~~~~~~~~~~p~~~~LV-l~a~~~~~~~~~~~~~~~~~~~~~lI~  158 (207)
T d1okkd2          81 VQAMKARGYDLLFVDTAGRLHTKHN-LMEELKKVKRAIAKADPEEPKEVWLV-LDAVTGQNGLEQAKKFHEAVGLTGVIV  158 (207)
T ss_dssp             HHHHHHHTCSEEEECCCCCCTTCHH-HHHHHHHHHHHHHHHCTTCCSEEEEE-EETTBCTHHHHHHHHHHHHHCCSEEEE
T ss_pred             HHHHHHCCCCEEECCCCCCCHHHHH-HHHHHHHHHHHHHHCCCCCCCEEEEE-EECCCCCHHHHHHHHHHHCCCCCEEEE
T ss_conf             9999987999997175222311277-88887777777653256787359999-620047167899997502138864898


Q ss_pred             EEECCCCCCCCEEE
Q ss_conf             33123218662677
Q gi|254780570|r  140 HMVTANMDEGPIIA  153 (205)
Q Consensus       140 H~v~~~~D~G~Ii~  153 (205)
                      -++|+.---|.++.
T Consensus       159 TKlDet~~~G~~l~  172 (207)
T d1okkd2         159 TKLDGTAKGGVLIP  172 (207)
T ss_dssp             ECTTSSCCCTTHHH
T ss_pred             ECCCCCCCCCHHHH
T ss_conf             33688887349999


No 65 
>d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=32.36  E-value=11  Score=15.22  Aligned_cols=26  Identities=19%  Similarity=0.300  Sum_probs=17.0

Q ss_pred             HHHHHHHHCCCC--CCEEEEEEEEEEECC
Q ss_conf             124321000123--430364311222057
Q gi|254780570|r   70 HEKAILMQLSSI--QPDLICLAGYMRLLS   96 (205)
Q Consensus        70 ~~~~l~~~l~~~--~~Dliv~~g~~~il~   96 (205)
                      ..+.+.+.+.++  +||++|+.|| +.+.
T Consensus       210 ~~e~f~~~l~~~~~~~dl~vlSGl-qmm~  237 (454)
T d1ua4a_         210 IREEFRESFSEVIKNVQLAILSGL-QALT  237 (454)
T ss_dssp             CCGGGSTTHHHHGGGCSEEEECCG-GGCC
T ss_pred             CCHHHHHHHHHHCCCCCEEEEECC-CCCC
T ss_conf             439899999972669888999761-0156


No 66 
>d1c7qa_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Bacillus stearothermophilus [TaxId: 1422]}
Probab=32.06  E-value=13  Score=14.78  Aligned_cols=58  Identities=24%  Similarity=0.192  Sum_probs=35.5

Q ss_pred             CEEEEEECCCCHHHHHHHH------HHHC--C--CCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECC
Q ss_conf             6599997698501899999------9973--9--99847999997688887888998608950463013
Q gi|254780570|r    4 KNIVIFISGEGTNMLSLIQ------ATKK--N--DYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYK   62 (205)
Q Consensus         4 ~riavl~SG~Gsnl~~Il~------~~~~--~--~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~   62 (205)
                      +-..+.+|.+|+.++.+..      .+..  +  ..... ..|+|+.+++.-...|++.+++++.++..
T Consensus       130 ~t~~iviSKSg~T~ETl~~~~~~~~~l~~~~~~~~~~~~-~~v~t~~~~~~l~~~a~~~~~~~f~~~~~  197 (442)
T d1c7qa_         130 DLSINVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKR-IYVTTDRTKGALKKLADQEGYETFVIPDN  197 (442)
T ss_dssp             CEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHTTS-EEEEECSSCSHHHHHHHHHTCEEEECCTT
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC-EEECCCCCHHHHHHHHHHHHHHHHHHHHH
T ss_conf             603898449988655889999999999873042666526-11123440123433102666555424321


No 67 
>d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]}
Probab=31.80  E-value=13  Score=14.75  Aligned_cols=112  Identities=11%  Similarity=0.103  Sum_probs=55.7

Q ss_pred             CCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE-EEEECCC-CCCCCC----HHHH
Q ss_conf             6659999769850---18999999973999847999997688887888998608950-4630132-332210----1243
Q gi|254780570|r    3 RKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT-FPIPYKD-YISRRE----HEKA   73 (205)
Q Consensus         3 k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~-~~i~~~~-~~~~~~----~~~~   73 (205)
                      |+||++.. |+=.   =+..|+++++... .+++.+|+|.....-.-...+.+++.. +-++... ..+...    .-..
T Consensus         2 k~Ki~~v~-GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~   79 (377)
T d1o6ca_           2 KLKVMTVF-GTRPEAIKMAPLVLELKKYP-EIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVR   79 (377)
T ss_dssp             CEEEEEEE-CSHHHHHHHHHHHHHGGGCT-TEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHH
T ss_pred             CCEEEEEE-ECHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH
T ss_conf             84699999-70585999999999997189-99879999379889999998516877753544388998899999999985


Q ss_pred             HHHHCCCCCCEEEEEEEEE-EECCCHHHH-CCCCCEEECCCCCCC
Q ss_conf             2100012343036431122-205721321-066542313532233
Q gi|254780570|r   74 ILMQLSSIQPDLICLAGYM-RLLSRDFVE-SYKNKILNIHPSLLP  116 (205)
Q Consensus        74 l~~~l~~~~~Dliv~~g~~-~il~~~~l~-~~~~~~iN~HpslLP  116 (205)
                      +.+.+.+.+||++++.|-. -.+..-+.. .....++-+|.++.-
T Consensus        80 ~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s  124 (377)
T d1o6ca_          80 LDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRT  124 (377)
T ss_dssp             HHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC
T ss_pred             HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCC
T ss_conf             056665336653676403454301566653114227999514565


No 68 
>d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]}
Probab=29.87  E-value=14  Score=14.53  Aligned_cols=98  Identities=15%  Similarity=0.153  Sum_probs=47.9

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE--CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             66599997698-5018999999973999847999997--68888788899860895046301323322101243210001
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS--DNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis--n~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      .+||++.+-+. +..+.+++....  .+++++..+.-  -.++....+.+++.+..+.....            +-+.+.
T Consensus         4 gl~i~~vGD~~~srV~~Sli~~~~--~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d------------~~~av~   69 (157)
T d1ml4a2           4 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELYLISPELLRMPRHIVEELREKGMKVVETTT------------LEDVIG   69 (157)
T ss_dssp             SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC------------THHHHT
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHH--HCCCCEEEECCCHHHCCHHHHHHHHHHCCCCEEECC------------HHHHHC
T ss_conf             999999847866759999999999--669847997162110116778777764146414258------------878524


Q ss_pred             CCCCEEEEEEEE----------------EEECCCHHHHCCCCCEEECCCCCCCCCCC
Q ss_conf             234303643112----------------22057213210665423135322333244
Q gi|254780570|r   80 SIQPDLICLAGY----------------MRLLSRDFVESYKNKILNIHPSLLPLFPG  120 (205)
Q Consensus        80 ~~~~Dliv~~g~----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG  120 (205)
                        +.|++..-.|                ...+..+.++..+..++=+||  ||  ||
T Consensus        70 --~aDvvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~mHp--lP--Rg  120 (157)
T d1ml4a2          70 --KLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP--LP--RV  120 (157)
T ss_dssp             --TCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC--SC--CS
T ss_pred             --CCCEEEEECCCCCCCCCHHHHHHHCCHHCCCHHHHHHCCCCEEEECC--CC--CC
T ss_conf             --38189964333443430025776600312589999626877587047--77--57


No 69 
>d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]}
Probab=29.29  E-value=15  Score=14.47  Aligned_cols=32  Identities=13%  Similarity=-0.002  Sum_probs=16.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             6659999769850189999999739998479999
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      ..+||+.+-|.-.-+.+++.++..  +++++.++
T Consensus         5 ~l~i~~vGD~~nnv~~Sli~~~~~--~g~~l~~~   36 (183)
T d1duvg2           5 EMTLVYAGDARNNMGNSMLEAAAL--TGLDLRLV   36 (183)
T ss_dssp             GCEEEEESCTTSHHHHHHHHHHHH--HCCEEEEE
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEE
T ss_conf             878999937824899999999998--49979997


No 70 
>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.80  E-value=15  Score=14.41  Aligned_cols=90  Identities=12%  Similarity=0.153  Sum_probs=45.0

Q ss_pred             EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHC-----CCCEEEEECCCCCCCCCHHHHHHHHCC
Q ss_conf             599997698501899999997399984799999768888788899860-----895046301323322101243210001
Q gi|254780570|r    5 NIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKE-----KVPTFPIPYKDYISRREHEKAILMQLS   79 (205)
Q Consensus         5 riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~-----~Ip~~~i~~~~~~~~~~~~~~l~~~l~   79 (205)
                      ||.=+++|.|.....|+++......+..+..+..+ ++...++.|++.     +++...++... .+-+++.........
T Consensus        43 ~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD-~s~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~  120 (280)
T d1jqea_          43 KILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVE-PSAEQIAKYKELVAKISNLENVKFAWHK-ETSSEYQSRMLEKKE  120 (280)
T ss_dssp             EEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEEC-CCHHHHHHHHHHHTTCCSCTTEEEEEEC-SCHHHHHHHHTTSSS
T ss_pred             EEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEE-CCHHHHHHHHHHHHHCCCCCCCCCCCHH-HHHHHHCCHHCCCCC
T ss_conf             69998487898889999875553247753999980-8589999999887524655322111002-245432001105677


Q ss_pred             CCCCEEEEEEEEEEECC
Q ss_conf             23430364311222057
Q gi|254780570|r   80 SIQPDLICLAGYMRLLS   96 (205)
Q Consensus        80 ~~~~Dliv~~g~~~il~   96 (205)
                      ....|+|++...+.-++
T Consensus       121 ~~~fD~I~~~~~l~~~~  137 (280)
T d1jqea_         121 LQKWDFIHMIQMLYYVK  137 (280)
T ss_dssp             CCCEEEEEEESCGGGCS
T ss_pred             CCCEEEEEECCCEECCC
T ss_conf             78644999813124478


No 71 
>d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]}
Probab=28.61  E-value=15  Score=14.39  Aligned_cols=89  Identities=17%  Similarity=0.254  Sum_probs=56.3

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             66599997698501899999997399984799999768888--------7888998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ..++.+|.-|+.|.-++|.+.+..+-+..++      ++|-        ..|.-|.++.+++-+.  .|..+...|-+..
T Consensus        60 P~N~g~~gkGn~s~~~~l~eqi~aGa~GlKi------HEDwGatpa~id~~L~vad~~dvqv~iH--tDtlNE~gfve~T  131 (390)
T d4ubpc2          60 PINVGILGKGHGSSIAPIMEQIDAGAAGLKI------HEDWGATPASIDRSLTVADEADVQVAIH--SDTLNEAGFLEDT  131 (390)
T ss_dssp             SSEEEEEEECCCSSHHHHHHHHHHTCCEEEE------EGGGCCCHHHHHHHHHHHHHHTCEEEEE--CCTTCSSCCHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHHEEEC------CCCCCCCHHHHHHHHHHHHCCCCEEEEE--CCCCCCCEEHHHH
T ss_conf             8231152326669867999999865500501------3113647789999999864059268985--3875101011658


Q ss_pred             HHHCC--------------CCCCEEEEEEEEEEECCCHH
Q ss_conf             10001--------------23430364311222057213
Q gi|254780570|r   75 LMQLS--------------SIQPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~   99 (205)
                      +..+.              .+.||++-++|+.-+||.+-
T Consensus       132 ~~a~~gRtiH~~HtEGaGGGHaPDii~~~g~~nvLpsST  170 (390)
T d4ubpc2         132 LRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSST  170 (390)
T ss_dssp             HHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCC
T ss_pred             HHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCC
T ss_conf             998679621114678888898832687637786557899


No 72 
>d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]}
Probab=28.42  E-value=15  Score=14.37  Aligned_cols=78  Identities=9%  Similarity=0.037  Sum_probs=38.2

Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEEEECCCC---CHHHHHHHH--CCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEE
Q ss_conf             9850189999999739998479999976888---878889986--08950463013233221012432100012343036
Q gi|254780570|r   12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNSN---AQGLVKARK--EKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLI   86 (205)
Q Consensus        12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d---a~~l~~a~~--~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dli   86 (205)
                      |.|+ +..|-+.+..   ...+ +|+|....   .+.+++...  .++.+.+++.-......+.=++..+.+++.++|+|
T Consensus        18 G~g~-l~~l~~~~~~---~~~v-liV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~I   92 (390)
T d1oj7a_          18 GKGA-IAGLREQIPH---DARV-LITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFL   92 (390)
T ss_dssp             STTG-GGGHHHHSCT---TCEE-EEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEE
T ss_pred             CCCH-HHHHHHHHHC---CCCE-EEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE
T ss_conf             5699-9999999867---9988-999897168774399999997189947999282379999999999999763378779


Q ss_pred             EEEEEEEE
Q ss_conf             43112220
Q gi|254780570|r   87 CLAGYMRL   94 (205)
Q Consensus        87 v~~g~~~i   94 (205)
                      |-.|=+..
T Consensus        93 IavGGGs~  100 (390)
T d1oj7a_          93 LAVGGGSV  100 (390)
T ss_dssp             EEEESHHH
T ss_pred             EECCCCCC
T ss_conf             85478854


No 73 
>d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]}
Probab=28.20  E-value=15  Score=14.34  Aligned_cols=38  Identities=18%  Similarity=0.267  Sum_probs=26.4

Q ss_pred             CEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             65999976985-018999999973999847999997688
Q gi|254780570|r    4 KNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         4 ~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      +.+++++.|.| +-+.++++.....+.+.+|.++.+++.
T Consensus         9 ~p~vliagGtGItP~~s~l~~~~~~~~~~~v~l~~~~r~   47 (141)
T d1tvca2           9 APRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNT   47 (141)
T ss_dssp             SCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEECSS
T ss_pred             CCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC
T ss_conf             848999774409999999999998399983577751122


No 74 
>d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]}
Probab=28.16  E-value=15  Score=14.34  Aligned_cols=38  Identities=18%  Similarity=0.140  Sum_probs=23.3

Q ss_pred             CCCEEEEEE---CCCCHHH---HHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             866599997---6985018---999999973999847999997688
Q gi|254780570|r    2 IRKNIVIFI---SGEGTNM---LSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         2 ~k~riavl~---SG~Gsnl---~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |+||+.|+.   ||.|...   ..+...+...  ..++..+.|..+
T Consensus         1 ~~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~--~~~~~~~~t~~~   44 (312)
T d2qv7a1           1 MRKRARIIYNPTSGKEQFKRELPDALIKLEKA--GYETSAYATEKI   44 (312)
T ss_dssp             CCEEEEEEECTTSTTSCHHHHHHHHHHHHHHT--TEEEEEEECCST
T ss_pred             CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCC
T ss_conf             98169999876889975799999999999977--992899982892


No 75 
>d1vima_ c.80.1.3 (A:) Hypothetical protein AF1796 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=28.01  E-value=15  Score=14.32  Aligned_cols=11  Identities=36%  Similarity=0.742  Sum_probs=5.1

Q ss_pred             EEEEEECCCCH
Q ss_conf             59999769850
Q gi|254780570|r    5 NIVIFISGEGT   15 (205)
Q Consensus         5 riavl~SG~Gs   15 (205)
                      -+++++|.+|.
T Consensus        84 Dl~i~iS~sG~   94 (192)
T d1vima_          84 DVLVGISGSGE   94 (192)
T ss_dssp             CEEEEECSSSC
T ss_pred             CCCEECCCCCC
T ss_conf             30002133111


No 76 
>d2hxma1 c.18.1.1 (A:82-304) Uracil-DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.97  E-value=9.1  Score=15.90  Aligned_cols=98  Identities=14%  Similarity=0.214  Sum_probs=45.2

Q ss_pred             HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE----EEECCCCCCC-----CCHHHHHHHHCCCCCCEEE
Q ss_conf             189999999739998479999976888878889986089504----6301323322-----1012432100012343036
Q gi|254780570|r   16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF----PIPYKDYISR-----REHEKAILMQLSSIQPDLI   86 (205)
Q Consensus        16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~----~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli   86 (205)
                      .|++|++..... ++.      ...+..+.++.=.+.||=..    ++....-.+.     +.|.+.+++.|.+.+..+|
T Consensus        88 SL~NI~kel~~d-~~~------~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~vV  160 (223)
T d2hxma1          88 SLENIYKELSTD-IED------FVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV  160 (223)
T ss_dssp             HHHHHHHHHHHH-CTT------CCCCSSCCTHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCCSCE
T ss_pred             CHHHHHHHHHHH-HCC------CCCCCCCCHHHHHCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE
T ss_conf             199999999876-356------8788866135442077688865167875402474026899999999999865467839


Q ss_pred             EEEEEEEEC--CCHHHHCCCCCEE-ECCCCCCCCCCCC
Q ss_conf             431122205--7213210665423-1353223332444
Q gi|254780570|r   87 CLAGYMRLL--SRDFVESYKNKIL-NIHPSLLPLFPGL  121 (205)
Q Consensus        87 v~~g~~~il--~~~~l~~~~~~~i-N~HpslLP~yrG~  121 (205)
                      .+. |+.--  -..++..-++.+| --|||.|-.|||.
T Consensus       161 fiL-WG~~A~~~~~~i~~~~h~il~~~HPSPls~~~gF  197 (223)
T d2hxma1         161 FLL-WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGF  197 (223)
T ss_dssp             EEE-ESHHHHHHTTTSCTTTSEEEEECCCSTTTGGGTT
T ss_pred             EEE-EEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC
T ss_conf             987-3232789988625689879982799721107798


No 77 
>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}
Probab=27.91  E-value=16  Score=14.31  Aligned_cols=45  Identities=13%  Similarity=0.268  Sum_probs=25.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC
Q ss_conf             665999976985018999999973999847999997688887888998608
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEK   53 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~   53 (205)
                      .+++.|+  |.|...++++.+..++.  .+|.  |.||.....-..+++++
T Consensus        18 ~k~vlIl--GaGGaarai~~aL~~~~--~~i~--I~nR~~~~a~~l~~~~~   62 (171)
T d1p77a1          18 NQHVLIL--GAGGATKGVLLPLLQAQ--QNIV--LANRTFSKTKELAERFQ   62 (171)
T ss_dssp             TCEEEEE--CCSHHHHTTHHHHHHTT--CEEE--EEESSHHHHHHHHHHHG
T ss_pred             CCEEEEE--CCCHHHHHHHHHHCCCC--CEEE--ECCCHHHHHHHHHHHHH
T ss_conf             9979998--97399999999870467--4565--23633788999999985


No 78 
>d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=27.82  E-value=14  Score=14.69  Aligned_cols=24  Identities=17%  Similarity=0.390  Sum_probs=16.1

Q ss_pred             HHHHHHHCCCC--CCEEEEEEEEEEEC
Q ss_conf             24321000123--43036431122205
Q gi|254780570|r   71 EKAILMQLSSI--QPDLICLAGYMRLL   95 (205)
Q Consensus        71 ~~~l~~~l~~~--~~Dliv~~g~~~il   95 (205)
                      .+.+.+.++++  +||++|+.|| +.+
T Consensus       209 ~e~f~~~l~~~~~~pdl~vlSGl-q~l  234 (451)
T d1l2la_         209 REEWIERFEEIAKRSELAIISGL-HPL  234 (451)
T ss_dssp             CHHHHHSHHHHHTTCSEEEEECC-TTC
T ss_pred             CHHHHHHHHHHHCCCCEEEEECC-CCC
T ss_conf             49999999976217888999463-101


No 79 
>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}
Probab=27.79  E-value=16  Score=14.29  Aligned_cols=70  Identities=11%  Similarity=0.022  Sum_probs=35.2

Q ss_pred             CCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             66599997698501899-99999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      ..|+++.+.|+  -.+. .+.+..... ..++  ++++......-+.+++++++...      .+   ++    +.+ +.
T Consensus         1 tirvgiiG~G~--~~~~~~~~~l~~~~-~~~~--~~~d~~~~~~~~~~~~~~~~~~~------~~---~~----~ll-~~   61 (167)
T d1xeaa1           1 SLKIAMIGLGD--IAQKAYLPVLAQWP-DIEL--VLCTRNPKVLGTLATRYRVSATC------TD---YR----DVL-QY   61 (167)
T ss_dssp             CEEEEEECCCH--HHHHTHHHHHTTST-TEEE--EEECSCHHHHHHHHHHTTCCCCC------SS---TT----GGG-GG
T ss_pred             CEEEEEECCCH--HHHHHHHHHHHHCC-CCEE--EEEECCHHHHHHHHHHCCCCCCC------CC---HH----HHC-CC
T ss_conf             96999996979--99999999998398-9689--99989999999999751434322------66---88----812-34


Q ss_pred             CCEEEEEEEE
Q ss_conf             4303643112
Q gi|254780570|r   82 QPDLICLAGY   91 (205)
Q Consensus        82 ~~Dliv~~g~   91 (205)
                      ++|+++.+..
T Consensus        62 ~iD~V~I~tp   71 (167)
T d1xeaa1          62 GVDAVMIHAA   71 (167)
T ss_dssp             CCSEEEECSC
T ss_pred             CCCEECCCCC
T ss_conf             4320013332


No 80 
>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}
Probab=25.88  E-value=17  Score=14.07  Aligned_cols=49  Identities=22%  Similarity=0.321  Sum_probs=27.1

Q ss_pred             CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE
Q ss_conf             6599997698-501899999997399984799999768888788899860895046
Q gi|254780570|r    4 KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP   58 (205)
Q Consensus         4 ~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~   58 (205)
                      |||+|...|. |+   +|.++.++..+..+|.+  .|+ +...+++|++.++....
T Consensus         2 k~I~IIG~G~mG~---sla~~L~~~g~~~~I~~--~D~-~~~~~~~a~~~~~~~~~   51 (171)
T d2g5ca2           2 QNVLIVGVGFMGG---SFAKSLRRSGFKGKIYG--YDI-NPESISKAVDLGIIDEG   51 (171)
T ss_dssp             CEEEEESCSHHHH---HHHHHHHHTTCCSEEEE--ECS-CHHHHHHHHHTTSCSEE
T ss_pred             CEEEEECCCHHHH---HHHHHHHHCCCCEEEEE--EEC-CHHHHHHHHHHHCCHHH
T ss_conf             7899994198999---99999996399708999--979-86889999984112222


No 81 
>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.69  E-value=17  Score=14.04  Aligned_cols=39  Identities=13%  Similarity=0.215  Sum_probs=20.0

Q ss_pred             CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             98665999976985018999999973999847999997688
Q gi|254780570|r    1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      |++++|.|++ |+|.--..|++...+...-.+|. +++.++
T Consensus        12 m~~k~IlItG-aTG~iG~~l~~~Ll~~g~~~~v~-~~~R~~   50 (232)
T d2bkaa1          12 MQNKSVFILG-ASGETGRVLLKEILEQGLFSKVT-LIGRRK   50 (232)
T ss_dssp             HTCCEEEEEC-TTSHHHHHHHHHHHHHTCCSEEE-EEESSC
T ss_pred             CCCCEEEEEC-CCCHHHHHHHHHHHHCCCCCEEE-EEECCH
T ss_conf             7999899988-98389999999999679987799-986681


No 82 
>d2ioja1 c.98.2.2 (A:206-325) Hypothetical protein AF1212 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=25.62  E-value=17  Score=14.04  Aligned_cols=34  Identities=15%  Similarity=0.163  Sum_probs=21.9

Q ss_pred             EEEE-EEEC--CCCCHHHHHHHHCCCCEEEEECCCCC
Q ss_conf             7999-9976--88887888998608950463013233
Q gi|254780570|r   32 EIVG-VFSD--NSNAQGLVKARKEKVPTFPIPYKDYI   65 (205)
Q Consensus        32 eI~~-Visn--~~da~~l~~a~~~~Ip~~~i~~~~~~   65 (205)
                      .+.+ |+|.  .|+...+++|++.++|....++.-|.
T Consensus        68 ~i~~iIltgg~~p~~~i~~la~~~~ipil~t~~dTf~  104 (120)
T d2ioja1          68 NVRCLILTGNLEPVQLVLTKAEERGVPVILTGHDTLT  104 (120)
T ss_dssp             TEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSCHHH
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHH
T ss_conf             9519999799998889999997679839997787999


No 83 
>d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]}
Probab=25.55  E-value=17  Score=14.03  Aligned_cols=111  Identities=13%  Similarity=0.121  Sum_probs=53.6

Q ss_pred             CEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC-CEEEEECCCCC-CCCC----HHHHH
Q ss_conf             659999769850---189999999739998479999976888878889986089-50463013233-2210----12432
Q gi|254780570|r    4 KNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV-PTFPIPYKDYI-SRRE----HEKAI   74 (205)
Q Consensus         4 ~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I-p~~~i~~~~~~-~~~~----~~~~l   74 (205)
                      +||++.. |+=.   -+..|++++++.. .+++.+++|..-....-+..+..++ |.+.++..... +...    .-..+
T Consensus         1 MKi~~v~-GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~   78 (376)
T d1f6da_           1 MKVLTVF-GTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGL   78 (376)
T ss_dssp             CEEEEEE-CSHHHHHHHHHHHHHHHHCT-TCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHH
T ss_pred             CEEEEEE-EHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH
T ss_conf             9699999-82673999999999997389-987799990889899999998628787744004889998999999999864


Q ss_pred             HHHCCCCCCEEEEEEEEE-EECCCHH-HHCCCCCEEECCCCCCC
Q ss_conf             100012343036431122-2057213-21066542313532233
Q gi|254780570|r   75 LMQLSSIQPDLICLAGYM-RLLSRDF-VESYKNKILNIHPSLLP  116 (205)
Q Consensus        75 ~~~l~~~~~Dliv~~g~~-~il~~~~-l~~~~~~~iN~HpslLP  116 (205)
                      .+.+.+.+||+|++.|=. -.+..-+ .......++-+|.++..
T Consensus        79 ~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s  122 (376)
T d1f6da_          79 KPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT  122 (376)
T ss_dssp             HHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC
T ss_pred             HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCC
T ss_conf             78897456762243103443136899987407538998524465


No 84 
>d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1 GatZ {Escherichia coli [TaxId: 562]}
Probab=24.64  E-value=18  Score=13.91  Aligned_cols=46  Identities=20%  Similarity=0.167  Sum_probs=32.1

Q ss_pred             HHHHHHHHHCCCCCCEEEEEEECCCCC--HHHHHHHHCCCCEEEEECCC
Q ss_conf             899999997399984799999768888--78889986089504630132
Q gi|254780570|r   17 MLSLIQATKKNDYPAEIVGVFSDNSNA--QGLVKARKEKVPTFPIPYKD   63 (205)
Q Consensus        17 l~~Il~~~~~~~~~~eI~~Visn~~da--~~l~~a~~~~Ip~~~i~~~~   63 (205)
                      |+.|+.+.++|+ ..-|..|+|.+|.-  ..+++|+..+.|..+....+
T Consensus         1 l~~~~~~~~~g~-~~gi~SvCsa~p~Vi~Aal~~a~~~~~pvlieAT~N   48 (420)
T d2fiqa1           1 MKTLIARHKAGE-HIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSN   48 (420)
T ss_dssp             CHHHHHHHHTTC-CBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETT
T ss_pred             CHHHHHHHHCCC-CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC
T ss_conf             956788740899-770332678999999999999985499789980311


No 85 
>d2phza1 c.92.2.4 (A:20-296) Iron-uptake system-binding protein FeuA {Bacillus subtilis [TaxId: 1423]}
Probab=24.51  E-value=15  Score=14.42  Aligned_cols=18  Identities=11%  Similarity=-0.202  Sum_probs=11.9

Q ss_pred             HHHHHHHHHCCCEEEECC
Q ss_conf             999999998695699898
Q gi|254780570|r  180 YPLALKYTILGKTSNSND  197 (205)
Q Consensus       180 ~~~~i~~~~~g~i~~~~~  197 (205)
                      ..+.++.+-+||+...+.
T Consensus       236 ~w~~l~AVkngrVy~~~~  253 (277)
T d2phza1         236 IWKSLKAVKEDHVYVNSV  253 (277)
T ss_dssp             HHHHSHHHHTTCEEECSS
T ss_pred             CCCCCCHHHCCCEEEECC
T ss_conf             621698615893899660


No 86 
>d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]}
Probab=24.31  E-value=18  Score=13.87  Aligned_cols=89  Identities=15%  Similarity=0.119  Sum_probs=53.8

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH
Q ss_conf             66599997698501899999997399984799999768888--------7888998608950463013233221012432
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI   74 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l   74 (205)
                      ..++.+|.-|++|.-++|.+....|-+..++      ++|-        ..|.-|.++.+++...  .|..+...|-+..
T Consensus        59 P~N~g~~gkGn~s~~~~l~eqi~AGa~GlKi------HEDwGatpa~id~~L~vad~~dvqv~iH--tDtlNE~gfvedT  130 (385)
T d1ejxc2          59 PVNIGLLGKGNVSQPDALREQVAAGVIGLKI------HEDWGATPAAIDCALTVADEMDIQVALH--SDTLNESGFVEDT  130 (385)
T ss_dssp             SSEEEEEEECCCSSHHHHHHHHHHTCSEEEE------EGGGCCCHHHHHHHHHHHHHHTCEEEEE--CCTTCSSCCHHHH
T ss_pred             CCCEEEEECCCCCCHHHHHHHHHHHHCEECC------CCCCCCCHHHHHHHHHHHHHCCCEEEEE--CCCCCCCCCCHHH
T ss_conf             8331052116669868999999711321447------7523567589999987675418358976--0535400200214


Q ss_pred             HHHCC--------------CCCCEEEEEEEEEEECCCHH
Q ss_conf             10001--------------23430364311222057213
Q gi|254780570|r   75 LMQLS--------------SIQPDLICLAGYMRLLSRDF   99 (205)
Q Consensus        75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~   99 (205)
                      +..++              .+.||++-++|+.-+||.+-
T Consensus       131 ~~a~~gRtiH~~H~EGaGGGHAPDii~~~~~~nvlpsST  169 (385)
T d1ejxc2         131 LAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSST  169 (385)
T ss_dssp             HHHHTTCCEEESSTTSTTSSSTTTGGGGGGCTTEEEEEE
T ss_pred             HHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC
T ss_conf             887579730332025677786631567624685357899


No 87 
>d1es6a2 b.31.1.1 (A:201-321) EV matrix protein {Ebola virus [TaxId: 205488]}
Probab=24.11  E-value=10  Score=15.64  Aligned_cols=15  Identities=40%  Similarity=0.643  Sum_probs=13.1

Q ss_pred             CCCCCCCCCCCCCCC
Q ss_conf             532233324442121
Q gi|254780570|r  111 HPSLLPLFPGLHTHR  125 (205)
Q Consensus       111 HpslLP~yrG~~~~~  125 (205)
                      -|-|||+|-|..|+.
T Consensus        85 ipvllpkyigldpis   99 (121)
T d1es6a2          85 IPVLLPKYIGLDPVA   99 (121)
T ss_dssp             EEEECCTTSCCCCTT
T ss_pred             EEEECCCCCCCCCCC
T ss_conf             236201102668789


No 88 
>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}
Probab=23.83  E-value=18  Score=13.81  Aligned_cols=44  Identities=11%  Similarity=0.108  Sum_probs=26.7

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHC
Q ss_conf             66599997698501899999997399984799999768888788899860
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKE   52 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~   52 (205)
                      .||+.|+  |.|...++++.+.....  .+  ..|.||.....-+.++.+
T Consensus        18 ~k~vlIl--GaGGaarai~~al~~~g--~~--i~I~nRt~~ka~~l~~~~   61 (170)
T d1nyta1          18 GLRILLI--GAGGASRGVLLPLLSLD--CA--VTITNRTVSRAEELAKLF   61 (170)
T ss_dssp             TCEEEEE--CCSHHHHHHHHHHHHTT--CE--EEEECSSHHHHHHHHHHT
T ss_pred             CCEEEEE--CCCHHHHHHHHHHCCCC--EE--EEECCCHHHHHHHHHHHH
T ss_conf             9989998--97589899999861552--37--973132177899999998


No 89 
>d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus [TaxId: 5724]}
Probab=23.74  E-value=18  Score=13.80  Aligned_cols=56  Identities=5%  Similarity=0.055  Sum_probs=33.8

Q ss_pred             CCCEEEEEECCCC--H-HHHHHHHHHHCCCCCCEEEEEEE----CCCCCHHHHHHHHCCCCEE
Q ss_conf             8665999976985--0-18999999973999847999997----6888878889986089504
Q gi|254780570|r    2 IRKNIVIFISGEG--T-NMLSLIQATKKNDYPAEIVGVFS----DNSNAQGLVKARKEKVPTF   57 (205)
Q Consensus         2 ~k~riavl~SG~G--s-nl~~Il~~~~~~~~~~eI~~Vis----n~~da~~l~~a~~~~Ip~~   57 (205)
                      -|++|.+.+.||-  | =+++|++....+.....-+++..    ...+......++++|++..
T Consensus         3 ~k~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAg~~~~~~g~~~~~~a~~~l~~~gi~~~   65 (146)
T d1p8aa_           3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDIS   65 (146)
T ss_dssp             CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCC
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHH
T ss_conf             999899997976899999999999866687137767751445689886268999997176202


No 90 
>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}
Probab=23.63  E-value=18  Score=13.79  Aligned_cols=82  Identities=15%  Similarity=0.173  Sum_probs=36.8

Q ss_pred             CCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC
Q ss_conf             665999976985018-9999999739998479999976888878889986089504630132332210124321000123
Q gi|254780570|r    3 RKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI   81 (205)
Q Consensus         3 k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~   81 (205)
                      +-|+ +|+.|.++.+ .++.+.+.+.  .++|.  ++++.....-+.+++.+...+..+..   +.++.++.+.+..+++
T Consensus         4 ~gK~-~lITGas~GIG~aia~~l~~~--G~~V~--~~~r~~~~l~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~   75 (242)
T d1ulsa_           4 KDKA-VLITGAAHGIGRATLELFAKE--GARLV--ACDIEEGPLREAAEAVGAHPVVMDVA---DPASVERGFAEALAHL   75 (242)
T ss_dssp             TTCE-EEEESTTSHHHHHHHHHHHHT--TCEEE--EEESCHHHHHHHHHTTTCEEEECCTT---CHHHHHHHHHHHHHHH
T ss_pred             CCCE-EEEECCCCHHHHHHHHHHHHC--CCEEE--EEECCHHHHHHHHHHCCCEEEEEECC---CHHHHHHHHHHHHHHC
T ss_conf             9989-999388888999999999987--99999--99798789999999729849999569---9999999999999855


Q ss_pred             -CCEEEE-EEEEE
Q ss_conf             -430364-31122
Q gi|254780570|r   82 -QPDLIC-LAGYM   92 (205)
Q Consensus        82 -~~Dliv-~~g~~   92 (205)
                       .+|.+| .||..
T Consensus        76 g~iDilVnnAG~~   88 (242)
T d1ulsa_          76 GRLDGVVHYAGIT   88 (242)
T ss_dssp             SSCCEEEECCCCC
T ss_pred             CCCEEEEECCCCC
T ss_conf             9960999887444


No 91 
>d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]}
Probab=22.99  E-value=19  Score=13.70  Aligned_cols=76  Identities=13%  Similarity=0.054  Sum_probs=36.4

Q ss_pred             CCCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH-HHHHCCCCEEEEECCCCCCCCCHHHHHHHH
Q ss_conf             86659999769850---18999999973999847999997688887888-998608950463013233221012432100
Q gi|254780570|r    2 IRKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV-KARKEKVPTFPIPYKDYISRREHEKAILMQ   77 (205)
Q Consensus         2 ~k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~-~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~   77 (205)
                      +|+|++++.+|+==   ..+.-   ...+    +|   .  ..++..+. .+++.|+.......-. .+.+...+.+.+.
T Consensus         1 vkPrV~iistG~Elv~~~~~~~---~~~g----~i---~--dsN~~~L~~~l~~~G~~v~~~~iv~-Dd~~~i~~~l~~~   67 (144)
T d1wu2a3           1 VKPKVGIIITGSELIEEPSEEG---FKEG----KI---V--ETNSIMLQGLVEKFFGEPILYGVLP-DDESIIKETLEKA   67 (144)
T ss_dssp             CCCEEEEEEECTTEESSCCHHH---HHTT----CE---E--CCHHHHHHHHHHHTTCEEEEEEEEC-SCHHHHTTHHHHH
T ss_pred             CCCEEEEECCCHHHCCCCCCCC---CCCC----CE---E--ECCCHHHHHHHCCCCCCEEEEEEEC-CHHHHHHHHHHHH
T ss_conf             9898999828831157898677---8999----68---6--4472677664113586226777725-6389999999975


Q ss_pred             CCCCCCEEEEEEEEE
Q ss_conf             012343036431122
Q gi|254780570|r   78 LSSIQPDLICLAGYM   92 (205)
Q Consensus        78 l~~~~~Dliv~~g~~   92 (205)
                      +.  +.|++|+.|=.
T Consensus        68 ~~--~~DlvIttGG~   80 (144)
T d1wu2a3          68 KN--ECDIVLITGGS   80 (144)
T ss_dssp             HH--CSEEEECC---
T ss_pred             HH--CCCEEEECCCC
T ss_conf             50--05689871664


No 92 
>d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=22.97  E-value=17  Score=14.11  Aligned_cols=22  Identities=14%  Similarity=0.277  Sum_probs=14.6

Q ss_pred             HHHHHHHHCCCC--CCEEEEEEEE
Q ss_conf             124321000123--4303643112
Q gi|254780570|r   70 HEKAILMQLSSI--QPDLICLAGY   91 (205)
Q Consensus        70 ~~~~l~~~l~~~--~~Dliv~~g~   91 (205)
                      ..+.+.+.++++  +||++|+.||
T Consensus       219 ~~e~f~~~l~~~~~~~dl~vlSGl  242 (467)
T d1gc5a_         219 MRREFREGFEEITRNVELAIISGL  242 (467)
T ss_dssp             CCHHHHHSHHHHHTTCSEEEECCG
T ss_pred             CCHHHHHHHHHHCCCCCEEEEECH
T ss_conf             559899999862658878999752


No 93 
>d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]}
Probab=22.95  E-value=19  Score=13.70  Aligned_cols=86  Identities=9%  Similarity=-0.009  Sum_probs=43.9

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC---CCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             665999976985018999999973999847999997688---88788----89986089504630132332210124321
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS---NAQGL----VKARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~---da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      ..|+ +|  |.|+ +..|-+..+.  ++.++ +++++..   ..+..    +..++.+|.+.+++.-......+.=++..
T Consensus         7 P~~i-~f--G~g~-l~~l~~~~~~--~g~k~-liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~   79 (359)
T d1o2da_           7 PTDV-FF--GEKI-LEKRGNIIDL--LGKRA-LVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAV   79 (359)
T ss_dssp             CCEE-EE--STTH-HHHHGGGGGG--TCSEE-EEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHH
T ss_pred             CCEE-EE--ECCH-HHHHHHHHHH--CCCEE-EEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH
T ss_conf             9989-99--4899-9999999997--59958-999858688874099999999987698499975746897989998764


Q ss_pred             HHCCCCCCEEEEEEEEEEEC
Q ss_conf             00012343036431122205
Q gi|254780570|r   76 MQLSSIQPDLICLAGYMRLL   95 (205)
Q Consensus        76 ~~l~~~~~Dliv~~g~~~il   95 (205)
                      +.+++.++|+||-.|=+..+
T Consensus        80 ~~~~~~~~D~IIavGGGs~i   99 (359)
T d1o2da_          80 ERYRNDSFDFVVGLGGGSPM   99 (359)
T ss_dssp             HHHTTSCCSEEEEEESHHHH
T ss_pred             HHCCCCCCCEEEECCCCCCH
T ss_conf             20013577568851664200


No 94 
>d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]}
Probab=22.93  E-value=19  Score=13.69  Aligned_cols=101  Identities=9%  Similarity=-0.031  Sum_probs=45.6

Q ss_pred             CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE--CCCCCHHHHHHH----HCCCCEEEEECCCCCCCCCHHHHHHH
Q ss_conf             665999976985018999999973999847999997--688887888998----60895046301323322101243210
Q gi|254780570|r    3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS--DNSNAQGLVKAR----KEKVPTFPIPYKDYISRREHEKAILM   76 (205)
Q Consensus         3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis--n~~da~~l~~a~----~~~Ip~~~i~~~~~~~~~~~~~~l~~   76 (205)
                      ..+||+.+-+.-.-+.+++.....  +++++.++--  -.++...++.++    +.+......+.            +.+
T Consensus         5 ~lkia~vGD~~nnV~~Sli~~~~~--~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------~~e   70 (185)
T d1dxha2           5 DISYAYLGDARNNMGNSLLLIGAK--LGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED------------PKE   70 (185)
T ss_dssp             GCEEEEESCCSSHHHHHHHHHHHH--TTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC------------HHH
T ss_pred             CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC------------HHH
T ss_conf             888999867845599999999998--599799986679875137899998876415881899967------------465


Q ss_pred             HCCCCCCEEEEEEEE--EE-----------------ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             001234303643112--22-----------------0572132106654231353223332444
Q gi|254780570|r   77 QLSSIQPDLICLAGY--MR-----------------LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        77 ~l~~~~~Dliv~~g~--~~-----------------il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .++  +.|+|..-.|  ++                 +..+.+....+..++=+||  ||.+||.
T Consensus        71 ai~--~aDvVyt~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ak~~~i~MH~--LPa~r~~  130 (185)
T d1dxha2          71 AVK--GVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAFHNS  130 (185)
T ss_dssp             HTT--TCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCCCSS
T ss_pred             CCC--CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCEEEECC--CCHHCCC
T ss_conf             023--14589722111254322467788887541120227778635997799718--7110242


No 95 
>d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]}
Probab=22.79  E-value=19  Score=13.68  Aligned_cols=38  Identities=18%  Similarity=0.288  Sum_probs=25.4

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      .++++++++|.| +-+.++++...... ...+.++.+++.
T Consensus         8 ~~~~v~IagGtGiaP~~s~~~~l~~~~-~~~~~l~~~~r~   46 (120)
T d2piaa2           8 AKSFILVAGGIGITPMLSMARQLRAEG-LRSFRLYYLTRD   46 (120)
T ss_dssp             CSEEEEEEEGGGHHHHHHHHHHHHHHC-SSEEEEEEEESC
T ss_pred             CCCEEEEEECCCHHHHHHHHHHHHHHC-CCCEEEEEEECC
T ss_conf             887899983606788999999999846-998499996177


No 96 
>d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]}
Probab=22.45  E-value=19  Score=13.63  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=16.4

Q ss_pred             CCEEEEEECCCCH-H--HHHHHHHHHCCCCCCEEE
Q ss_conf             6659999769850-1--899999997399984799
Q gi|254780570|r    3 RKNIVIFISGEGT-N--MLSLIQATKKNDYPAEIV   34 (205)
Q Consensus         3 k~riavl~SG~Gs-n--l~~Il~~~~~~~~~~eI~   34 (205)
                      ||||.+++||+.| +  ++.+-++....+.+++|.
T Consensus         1 kk~IlL~C~~G~STs~l~~km~~~a~~~~~~~~i~   35 (103)
T d1iiba_           1 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIE   35 (103)
T ss_dssp             CEEEEEEESCHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE
T ss_conf             97899988998549999999999999869978999


No 97 
>d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]}
Probab=22.29  E-value=20  Score=13.61  Aligned_cols=30  Identities=27%  Similarity=0.397  Sum_probs=17.6

Q ss_pred             CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE
Q ss_conf             66599997698-50189999999739998479999
Q gi|254780570|r    3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV   36 (205)
Q Consensus         3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V   36 (205)
                      |+||+|..+|+ |+++-.++.   .+.+ .++.++
T Consensus         1 r~KI~IIGaG~VG~~~A~~l~---~~~l-~dl~l~   31 (142)
T d1uxja1           1 RKKISIIGAGFVGSTTAHWLA---AKEL-GDIVLL   31 (142)
T ss_dssp             CCEEEEECCSHHHHHHHHHHH---HHTC-SEEEEE
T ss_pred             CCEEEEECCCHHHHHHHHHHH---HCCC-CEEEEE
T ss_conf             986999897989999999998---4783-508988


No 98 
>d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]}
Probab=22.07  E-value=20  Score=13.58  Aligned_cols=142  Identities=15%  Similarity=0.262  Sum_probs=67.5

Q ss_pred             CEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHHH
Q ss_conf             65999976--985--01899999997399984799999768888788----89986089504630132332210124321
Q gi|254780570|r    4 KNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPYKDYISRREHEKAIL   75 (205)
Q Consensus         4 ~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~   75 (205)
                      +.+..|+-  |.|  |.+-.|-.+....  +..|.+|-+|.-...+.    .+|+..++|++..+...     +....+.
T Consensus         9 p~vi~lvGptGvGKTTTiAKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~-----d~~~~l~   81 (211)
T d2qy9a2           9 PFVILMVGVNGVGKTTTIGKLARQFEQQ--GKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGA-----DSASVIF   81 (211)
T ss_dssp             TEEEEEECCTTSCHHHHHHHHHHHHHTT--TCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTC-----CHHHHHH
T ss_pred             CEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCC-----CHHHHHH
T ss_conf             9799998999999899999999999977--99479982321366612045554343388621135687-----7999999


Q ss_pred             HH---CCCCCCEEEE--EEEEEEECCCHHHHCCCC--CEEE-------CCCCC-CCCCCCCCCCCCHHC--CCCCCCCCC
Q ss_conf             00---0123430364--311222057213210665--4231-------35322-333244421210000--246534453
Q gi|254780570|r   76 MQ---LSSIQPDLIC--LAGYMRLLSRDFVESYKN--KILN-------IHPSL-LPLFPGLHTHRRVLQ--SGIKITGCT  138 (205)
Q Consensus        76 ~~---l~~~~~Dliv--~~g~~~il~~~~l~~~~~--~~iN-------~Hpsl-LP~yrG~~~~~~ai~--~g~~~~G~T  138 (205)
                      +.   .+..+.|+|+  .+|.++.=. +.++..+.  .+++       .++-| |+..-|......+..  +.....|+-
T Consensus        82 ~~~~~a~~~~~d~ilIDTaGr~~~d~-~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI  160 (211)
T d2qy9a2          82 DAIQAAKARNIDVLIADTAGRLQNKS-HLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGIT  160 (211)
T ss_dssp             HHHHHHHHTTCSEEEECCCCCGGGHH-HHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEE
T ss_pred             HHHHHHHHCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCCCCEEE
T ss_conf             99999987699889965688763207-78999999999985304668600122001235763377876442101786489


Q ss_pred             EEEECCCCCCCCEEE
Q ss_conf             033123218662677
Q gi|254780570|r  139 VHMVTANMDEGPIIA  153 (205)
Q Consensus       139 iH~v~~~~D~G~Ii~  153 (205)
                      +-++|+.---|.++.
T Consensus       161 lTKlDe~~~~G~~l~  175 (211)
T d2qy9a2         161 LTKLDGTAKGGVIFS  175 (211)
T ss_dssp             EECCTTCTTTTHHHH
T ss_pred             EEECCCCCCCCHHHH
T ss_conf             961278887209999


No 99 
>d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]}
Probab=21.30  E-value=20  Score=13.48  Aligned_cols=36  Identities=25%  Similarity=0.268  Sum_probs=23.8

Q ss_pred             CCEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECC
Q ss_conf             6659999769850--1899999997399984799999768
Q gi|254780570|r    3 RKNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDN   40 (205)
Q Consensus         3 k~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~   40 (205)
                      .|||++.+||+-.  .+..+++..+.  ...+|.+|.|..
T Consensus         6 ~KkIllgvTGsiaa~k~~~l~~~L~~--~g~eV~vv~T~~   43 (183)
T d1p3y1_           6 DKKLLIGICGSISSVGISSYLLYFKS--FFKEIRVVMTKT   43 (183)
T ss_dssp             GCEEEEEECSCGGGGGTHHHHHHHTT--TSSEEEEEECHH
T ss_pred             CCEEEEEEECHHHHHHHHHHHHHHHH--CCCEEEEEEECC
T ss_conf             98799998088999999999999998--899399999724


No 100
>d1js1x2 c.78.1.1 (X:164-324) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]}
Probab=21.05  E-value=19  Score=13.71  Aligned_cols=25  Identities=12%  Similarity=0.162  Sum_probs=15.3

Q ss_pred             ECCCHHHHCCCCCEEECCCCCCCCCCCC
Q ss_conf             0572132106654231353223332444
Q gi|254780570|r   94 LLSRDFVESYKNKILNIHPSLLPLFPGL  121 (205)
Q Consensus        94 il~~~~l~~~~~~~iN~HpslLP~yrG~  121 (205)
                      .....+.+..+ .+|=+||  ||.+||.
T Consensus        94 ~~~~~l~~~~~-dai~MHc--lPa~Rg~  118 (161)
T d1js1x2          94 TVGDRQMAVTN-NAYFMHC--LPVRRNM  118 (161)
T ss_dssp             SBCHHHHTTSS-SCEEECC--SCCCBTT
T ss_pred             HHHHHHHHCCC-CEEECCC--CCCCCCH
T ss_conf             45677763377-6177278--7655103


No 101
>d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]}
Probab=21.02  E-value=21  Score=13.44  Aligned_cols=57  Identities=21%  Similarity=0.213  Sum_probs=33.4

Q ss_pred             CCEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEEC
Q ss_conf             665999976--985--01899999997399984799999768888788----899860895046301
Q gi|254780570|r    3 RKNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPY   61 (205)
Q Consensus         3 k~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~   61 (205)
                      ++.+..|+.  |.|  |.+-.|-.+.+...  ..|.+|-+|.--.++.    .+|+..|+|++..+.
T Consensus        11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~   75 (211)
T d1j8yf2          11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKG--FKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPG   75 (211)
T ss_dssp             SSEEEEEECSCCC----HHHHHHHHHHHTT--CCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTT
T ss_pred             CCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCC
T ss_conf             998999989999998999999999999779--93699972023551567898740146842230244


No 102
>d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]}
Probab=20.96  E-value=19  Score=13.71  Aligned_cols=12  Identities=25%  Similarity=0.783  Sum_probs=7.7

Q ss_pred             EEEEEECCCCHH
Q ss_conf             599997698501
Q gi|254780570|r    5 NIVIFISGEGTN   16 (205)
Q Consensus         5 riavl~SG~Gsn   16 (205)
                      .+.+|+||.||.
T Consensus       113 lvl~LISGGgSA  124 (414)
T d2b8na1         113 TVLFLLSGGGSS  124 (414)
T ss_dssp             EEEEEECTTHHH
T ss_pred             EEEEEEECCCCC
T ss_conf             689985088540


No 103
>d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]}
Probab=20.96  E-value=21  Score=13.43  Aligned_cols=38  Identities=11%  Similarity=0.086  Sum_probs=20.2

Q ss_pred             HHHHHHHHHCCCCCCEEEEEEECCCC--------------CHHHHHHHHCCCCEEEE
Q ss_conf             89999999739998479999976888--------------87888998608950463
Q gi|254780570|r   17 MLSLIQATKKNDYPAEIVGVFSDNSN--------------AQGLVKARKEKVPTFPI   59 (205)
Q Consensus        17 l~~Il~~~~~~~~~~eI~~Visn~~d--------------a~~l~~a~~~~Ip~~~i   59 (205)
                      .+.|-+|...+ .    .++||-+|-              ...+..+.+++|..+..
T Consensus        47 ~~vi~~Ai~~~-a----dlIItHHp~~f~~~~~~~~~~~~~~~~~~lik~~I~vy~~   98 (265)
T d2fywa1          47 EETVAEAIEKG-V----DLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS   98 (265)
T ss_dssp             HHHHHHHHHTT-C----SEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHHHHCC-C----CEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEE
T ss_conf             99999999769-9----9899627851322223357871789999998689708980


No 104
>d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]}
Probab=20.65  E-value=21  Score=13.39  Aligned_cols=20  Identities=30%  Similarity=0.501  Sum_probs=11.1

Q ss_pred             CCCHHHHCCCCCEEECCCCCCC
Q ss_conf             5721321066542313532233
Q gi|254780570|r   95 LSRDFVESYKNKILNIHPSLLP  116 (205)
Q Consensus        95 l~~~~l~~~~~~~iN~HpslLP  116 (205)
                      +..++++..+..++=+||  ||
T Consensus       249 v~~~~l~~a~~~~i~MHc--LP  268 (310)
T d1tuga1         249 LRASDLHNAKANMKVLHP--LP  268 (310)
T ss_dssp             BCGGGGTTSCSSCEEECC--SC
T ss_pred             HHHHHHHCCCCCCEEEEC--CC
T ss_conf             009999537999599528--99


No 105
>d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]}
Probab=20.53  E-value=21  Score=13.37  Aligned_cols=37  Identities=19%  Similarity=0.276  Sum_probs=24.6

Q ss_pred             CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC
Q ss_conf             665999976985-018999999973999847999997688
Q gi|254780570|r    3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS   41 (205)
Q Consensus         3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~   41 (205)
                      +.|+++++.|.| +-+.+++++..+..  .++.++...+.
T Consensus         8 ~~kvllIAgG~GitPl~sm~~~l~~~~--~~v~l~~g~r~   45 (160)
T d1ep3b2           8 TDKILIIGGGIGVPPLYELAKQLEKTG--CQMTILLGFAS   45 (160)
T ss_dssp             TSEEEEEEEGGGSHHHHHHHHHHHHHT--CEEEEEEEESS
T ss_pred             CCEEEEEEEEEEHHHHHHHHHHHHHCC--CCEEEEEECCC
T ss_conf             997999971044999999999998645--85589996389


No 106
>d2ffea1 c.143.1.1 (A:1-309) LPPG:FO 2-phospho-L-lactate transferase CofD {Methanosarcina mazei [TaxId: 2209]}
Probab=20.22  E-value=22  Score=13.33  Aligned_cols=27  Identities=22%  Similarity=0.183  Sum_probs=12.4

Q ss_pred             CCCHHHHHHHHHHHCCCCCCEEEEEEE
Q ss_conf             985018999999973999847999997
Q gi|254780570|r   12 GEGTNMLSLIQATKKNDYPAEIVGVFS   38 (205)
Q Consensus        12 G~Gsnl~~Il~~~~~~~~~~eI~~Vis   38 (205)
                      |+||.+..++...+.-..+.+++.|+|
T Consensus         5 gGGtGl~~ll~glk~~~~~~~lt~IVt   31 (309)
T d2ffea1           5 SGGTGTPKLLDGLKEILPEEELTVVVN   31 (309)
T ss_dssp             ECTTTHHHHHHHHTTTSCGGGCEEEEC
T ss_pred             CCCCCHHHHHHHHHHHCCCCCEEEEEE
T ss_conf             465118999999986178887699998


No 107
>d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]}
Probab=20.12  E-value=17  Score=14.03  Aligned_cols=12  Identities=17%  Similarity=0.390  Sum_probs=5.2

Q ss_pred             HHHHHHCCCCEE
Q ss_conf             889986089504
Q gi|254780570|r   46 LVKARKEKVPTF   57 (205)
Q Consensus        46 l~~a~~~~Ip~~   57 (205)
                      +.-|.++++|..
T Consensus        89 L~ta~~~~lpi~  100 (229)
T d2djia3          89 VVTNVRYNMPVI  100 (229)
T ss_dssp             HHHHHHTTCCCE
T ss_pred             HHHHHCCCCCCE
T ss_conf             555402367720


Done!