Query gi|254780570|ref|YP_003064983.1| phosphoribosylglycinamide formyltransferase [Candidatus Liberibacter asiaticus str. psy62] Match_columns 205 No_of_seqs 135 out of 5334 Neff 6.9 Searched_HMMs 13730 Date Wed Jun 1 10:17:13 2011 Command /home/congqian_1/programs/hhpred/hhsearch -i 254780570.hhm -d /home/congqian_1/database/scop/scop70_1_75.hhm No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM 1 d1jkxa_ c.65.1.1 (A:) Glycinam 100.0 0 0 376.6 20.8 200 4-203 1-200 (209) 2 d1meoa_ c.65.1.1 (A:) Glycinam 100.0 0 0 361.5 18.7 195 4-198 1-195 (205) 3 d2bw0a2 c.65.1.1 (A:1-203) 10- 100.0 1.4E-35 1E-39 262.9 15.9 186 4-195 1-191 (203) 4 d1fmta2 c.65.1.1 (A:1-206) Met 100.0 2E-35 1.5E-39 261.8 16.2 182 3-195 3-194 (206) 5 d2blna2 c.65.1.1 (A:1-203) Pol 100.0 3.3E-35 2.4E-39 260.3 13.8 180 4-196 1-189 (203) 6 d1zgha2 c.65.1.1 (A:1-164) Met 99.9 7.5E-25 5.5E-29 188.9 9.9 114 75-195 40-153 (164) 7 d1nvmb1 c.2.1.3 (B:1-131,B:287 95.9 0.031 2.2E-06 32.9 8.7 76 1-89 1-78 (157) 8 d1r0ka2 c.2.1.3 (A:3-126,A:265 93.4 0.12 8.9E-06 28.8 6.4 56 3-61 2-59 (150) 9 d1q0qa2 c.2.1.3 (A:1-125,A:275 92.4 0.19 1.4E-05 27.5 6.3 54 4-60 2-57 (151) 10 d1zh8a1 c.2.1.3 (A:4-131,A:276 91.2 0.48 3.5E-05 24.7 7.2 73 1-89 1-74 (181) 11 d2d13a1 c.26.2.1 (A:2-227) Hyp 90.1 0.61 4.5E-05 24.0 7.8 80 3-88 3-95 (226) 12 d1ydwa1 c.2.1.3 (A:6-133,A:305 88.7 0.71 5.2E-05 23.5 6.5 75 3-91 1-75 (184) 13 d1f0ka_ c.87.1.2 (A:) Peptidog 87.2 0.95 6.9E-05 22.7 6.5 83 4-90 1-98 (351) 14 d1ni5a1 c.26.2.5 (A:0-226) tRN 86.1 1.1 7.8E-05 22.3 8.1 60 3-62 13-82 (227) 15 d1pfka_ c.89.1.1 (A:) ATP-depe 85.1 0.9 6.6E-05 22.8 5.4 33 1-36 1-38 (320) 16 d1yo6a1 c.2.1.2 (A:1-250) Puta 84.7 0.91 6.6E-05 22.8 5.2 88 1-92 1-92 (250) 17 d1kjqa2 c.30.1.1 (A:2-112) Gly 84.4 1 7.4E-05 22.5 5.4 94 3-114 11-104 (111) 18 d1np3a2 c.2.1.6 (A:1-182) Clas 80.2 1.8 0.00013 20.7 5.9 112 3-131 16-143 (182) 19 d1f06a1 c.2.1.3 (A:1-118,A:269 76.3 2.3 0.00017 20.0 5.8 39 1-42 1-39 (170) 20 d1wy5a1 c.26.2.5 (A:1-216) Til 76.1 2.4 0.00017 19.9 5.7 88 3-91 24-134 (216) 21 d1pvva2 c.78.1.1 (A:151-313) O 74.0 1.4 0.0001 21.5 3.4 26 94-121 101-126 (163) 22 d1v4va_ c.87.1.3 (A:) UDP-N-ac 72.6 2.9 0.00021 19.4 4.8 112 4-116 3-124 (373) 23 d1n1ea2 c.2.1.6 (A:9-197) Glyc 71.4 2 0.00014 20.5 3.6 31 1-36 5-36 (189) 24 d1b74a1 c.78.2.1 (A:1-105) Glu 69.3 3.4 0.00024 18.9 4.7 93 4-116 1-99 (105) 25 d1hdoa_ c.2.1.2 (A:) Biliverdi 64.6 4.1 0.0003 18.3 5.0 35 1-38 1-35 (205) 26 d1iowa1 c.30.1.2 (A:1-96) D-Al 59.7 5 0.00037 17.7 4.1 26 2-27 1-33 (96) 27 d2at2a2 c.78.1.1 (A:145-295) A 58.8 4.6 0.00033 18.0 3.5 24 95-120 88-111 (151) 28 d1pg5a2 c.78.1.1 (A:147-299) A 58.5 5.2 0.00038 17.6 8.5 98 3-120 3-117 (153) 29 d1jf8a_ c.44.1.1 (A:) Arsenate 56.5 5.5 0.0004 17.4 3.6 55 3-57 2-59 (130) 30 d2czca2 c.2.1.3 (A:1-139,A:302 56.3 5.7 0.00041 17.3 7.2 55 2-60 1-55 (172) 31 d1h6da1 c.2.1.3 (A:51-212,A:37 54.4 6.1 0.00044 17.1 6.9 75 3-90 33-108 (221) 32 d1gpja2 c.2.1.7 (A:144-302) Gl 52.9 6.4 0.00047 16.9 6.0 81 2-101 23-105 (159) 33 d2i6ga1 c.66.1.44 (A:1-198) Pu 52.7 6.5 0.00047 16.9 4.5 77 3-98 31-111 (198) 34 d1qh8b_ c.92.2.3 (B:) Nitrogen 51.1 6.8 0.0005 16.8 5.4 52 12-65 124-188 (519) 35 d4pfka_ c.89.1.1 (A:) ATP-depe 49.3 7.3 0.00053 16.6 3.7 100 4-109 2-121 (319) 36 d1qfja2 c.25.1.1 (A:98-232) NA 48.3 7.6 0.00055 16.5 4.3 39 3-41 5-44 (135) 37 d1npya1 c.2.1.7 (A:103-269) Sh 48.1 7.6 0.00055 16.5 6.1 47 3-54 17-63 (167) 38 d1ybha3 c.36.1.9 (A:460-667) A 48.0 7.5 0.00055 16.5 3.2 12 122-133 196-207 (208) 39 d3ck2a1 d.159.1.7 (A:1-173) Un 47.4 7.3 0.00053 16.6 3.0 25 1-25 1-27 (173) 40 d2dt5a2 c.2.1.12 (A:78-203) Tr 46.6 6.2 0.00045 17.0 2.6 49 4-58 4-52 (126) 41 d2hzba1 c.143.1.1 (A:2-312) Hy 45.9 8.2 0.0006 16.2 4.1 32 3-38 2-33 (311) 42 d1ltqa1 c.108.1.9 (A:153-301) 45.8 8.2 0.0006 16.2 3.9 22 18-42 42-63 (149) 43 d3euga_ c.18.1.1 (A:) Uracil-D 45.2 3.4 0.00025 18.8 1.1 53 68-121 138-193 (225) 44 d1vl2a1 c.26.2.1 (A:2-169) Arg 44.0 8.7 0.00064 16.0 3.8 32 3-39 1-34 (168) 45 d1tlta1 c.2.1.3 (A:5-127,A:268 43.7 8.8 0.00064 16.0 6.0 51 3-57 1-52 (164) 46 d2yvta1 d.159.1.6 (A:4-260) Un 43.2 6.9 0.00051 16.7 2.4 34 2-37 1-36 (257) 47 d1krha2 c.25.1.2 (A:206-338) B 42.6 9.2 0.00067 15.9 3.8 40 3-42 5-45 (133) 48 d1tzya_ a.22.1.1 (A:) Histone 42.4 3.3 0.00024 19.0 0.6 12 106-117 95-106 (106) 49 d1fdra2 c.25.1.1 (A:101-248) F 42.2 9.3 0.00068 15.8 3.9 38 4-41 7-45 (148) 50 d1jyka_ c.68.1.13 (A:) CTP:pho 42.1 9.3 0.00068 15.8 8.3 84 2-90 2-105 (229) 51 d2j8xa1 c.18.1.1 (A:26-255) Ur 41.0 6.6 0.00048 16.9 2.0 92 16-116 89-193 (230) 52 d1ehia1 c.30.1.2 (A:3-134) D-a 40.9 9.7 0.00071 15.7 4.7 39 3-42 1-46 (132) 53 d1m1na_ c.92.2.3 (A:) Nitrogen 38.8 10 0.00076 15.5 5.8 54 12-65 123-184 (477) 54 d1vlva2 c.78.1.1 (A:153-313) O 38.5 11 0.00077 15.5 4.3 31 3-35 3-33 (161) 55 d1txga2 c.2.1.6 (A:1-180) Glyc 37.7 11 0.00079 15.4 4.0 19 4-22 1-20 (180) 56 d1u35c1 a.22.1.1 (C:814-919) m 37.5 4.3 0.00032 18.1 0.6 12 106-117 94-105 (106) 57 d1e9yb2 c.1.9.2 (B:132-431,B:4 36.9 11 0.00081 15.3 4.9 89 3-99 59-169 (389) 58 d2nvwa1 c.2.1.3 (A:2-154,A:374 36.3 11 0.00083 15.2 6.3 74 4-89 17-92 (237) 59 d1u6ka1 c.127.1.1 (A:2-283) F4 36.2 3.2 0.00023 19.0 -0.2 52 29-87 62-117 (282) 60 d1umka2 c.25.1.1 (A:154-300) c 34.6 12 0.00088 15.1 4.8 39 4-42 19-59 (147) 61 d1bg6a2 c.2.1.6 (A:4-187) N-(1 34.4 12 0.00089 15.0 5.1 46 3-56 1-47 (184) 62 d1ekxa2 c.78.1.1 (A:151-310) A 34.1 12 0.0009 15.0 8.9 110 3-151 4-132 (160) 63 d1y0ba1 c.61.1.1 (A:1-191) Xan 34.0 12 0.0009 15.0 6.9 16 46-61 66-81 (191) 64 d1okkd2 c.37.1.10 (D:97-303) G 32.8 13 0.00094 14.9 6.5 145 3-153 5-172 (207) 65 d1ua4a_ c.72.1.3 (A:) ADP-depe 32.4 11 0.00084 15.2 2.1 26 70-96 210-237 (454) 66 d1c7qa_ c.80.1.2 (A:) Phosphog 32.1 13 0.00097 14.8 7.4 58 4-62 130-197 (442) 67 d1o6ca_ c.87.1.3 (A:) UDP-N-ac 31.8 13 0.00098 14.7 6.6 112 3-116 2-124 (377) 68 d1ml4a2 c.78.1.1 (A:152-308) A 29.9 14 0.001 14.5 7.8 98 3-120 4-120 (157) 69 d1duvg2 c.78.1.1 (G:151-333) O 29.3 15 0.0011 14.5 3.6 32 3-36 5-36 (183) 70 d1jqea_ c.66.1.19 (A:) Histami 28.8 15 0.0011 14.4 7.6 90 5-96 43-137 (280) 71 d4ubpc2 c.1.9.2 (C:132-434,C:4 28.6 15 0.0011 14.4 4.8 89 3-99 60-170 (390) 72 d1oj7a_ e.22.1.2 (A:) Hypothet 28.4 15 0.0011 14.4 4.0 78 12-94 18-100 (390) 73 d1tvca2 c.25.1.2 (A:111-251) M 28.2 15 0.0011 14.3 4.9 38 4-41 9-47 (141) 74 d2qv7a1 e.52.1.2 (A:1-312) Dia 28.2 15 0.0011 14.3 6.3 38 2-41 1-44 (312) 75 d1vima_ c.80.1.3 (A:) Hypothet 28.0 15 0.0011 14.3 3.9 11 5-15 84-94 (192) 76 d2hxma1 c.18.1.1 (A:82-304) Ur 28.0 9.1 0.00067 15.9 1.0 98 16-121 88-197 (223) 77 d1p77a1 c.2.1.7 (A:102-272) Sh 27.9 16 0.0011 14.3 5.6 45 3-53 18-62 (171) 78 d1l2la_ c.72.1.3 (A:) ADP-depe 27.8 14 0.001 14.7 1.9 24 71-95 209-234 (451) 79 d1xeaa1 c.2.1.3 (A:2-122,A:267 27.8 16 0.0011 14.3 6.9 70 3-91 1-71 (167) 80 d2g5ca2 c.2.1.6 (A:30-200) Pre 25.9 17 0.0012 14.1 8.4 49 4-58 2-51 (171) 81 d2bkaa1 c.2.1.2 (A:5-236) TAT- 25.7 17 0.0012 14.0 6.4 39 1-41 12-50 (232) 82 d2ioja1 c.98.2.2 (A:206-325) H 25.6 17 0.0012 14.0 2.7 34 32-65 68-104 (120) 83 d1f6da_ c.87.1.3 (A:) UDP-N-ac 25.5 17 0.0012 14.0 7.8 111 4-116 1-122 (376) 84 d2fiqa1 c.1.10.7 (A:1-420) Put 24.6 18 0.0013 13.9 2.5 46 17-63 1-48 (420) 85 d2phza1 c.92.2.4 (A:20-296) Ir 24.5 15 0.0011 14.4 1.6 18 180-197 236-253 (277) 86 d1ejxc2 c.1.9.2 (C:1130-1422,C 24.3 18 0.0013 13.9 4.3 89 3-99 59-169 (385) 87 d1es6a2 b.31.1.1 (A:201-321) E 24.1 10 0.00072 15.6 0.6 15 111-125 85-99 (121) 88 d1nyta1 c.2.1.7 (A:102-271) Sh 23.8 18 0.0013 13.8 7.0 44 3-52 18-61 (170) 89 d1p8aa_ c.44.1.1 (A:) Tyrosine 23.7 18 0.0013 13.8 4.7 56 2-57 3-65 (146) 90 d1ulsa_ c.2.1.2 (A:) beta-keto 23.6 18 0.0013 13.8 5.3 82 3-92 4-88 (242) 91 d1wu2a3 c.57.1.2 (A:181-324) M 23.0 19 0.0014 13.7 3.1 76 2-92 1-80 (144) 92 d1gc5a_ c.72.1.3 (A:) ADP-depe 23.0 17 0.0012 14.1 1.5 22 70-91 219-242 (467) 93 d1o2da_ e.22.1.2 (A:) Alcohol 23.0 19 0.0014 13.7 6.8 86 3-95 7-99 (359) 94 d1dxha2 c.78.1.1 (A:151-335) O 22.9 19 0.0014 13.7 3.8 101 3-121 5-130 (185) 95 d2piaa2 c.25.1.2 (A:104-223) P 22.8 19 0.0014 13.7 4.0 38 3-41 8-46 (120) 96 d1iiba_ c.44.2.1 (A:) Enzyme I 22.4 19 0.0014 13.6 4.0 32 3-34 1-35 (103) 97 d1uxja1 c.2.1.5 (A:2-143) Mala 22.3 20 0.0014 13.6 3.3 30 3-36 1-31 (142) 98 d2qy9a2 c.37.1.10 (A:285-495) 22.1 20 0.0014 13.6 5.7 142 4-153 9-175 (211) 99 d1p3y1_ c.34.1.1 (1:) MrsD {Ba 21.3 20 0.0015 13.5 4.3 36 3-40 6-43 (183) 100 d1js1x2 c.78.1.1 (X:164-324) T 21.1 19 0.0014 13.7 1.5 25 94-121 94-118 (161) 101 d1j8yf2 c.37.1.10 (F:87-297) G 21.0 21 0.0015 13.4 7.0 57 3-61 11-75 (211) 102 d2b8na1 c.118.1.1 (A:4-417) Pu 21.0 19 0.0014 13.7 1.5 12 5-16 113-124 (414) 103 d2fywa1 c.135.1.1 (A:1-265) Hy 21.0 21 0.0015 13.4 5.5 38 17-59 47-98 (265) 104 d1tuga1 c.78.1.1 (A:1-150,A:15 20.6 21 0.0015 13.4 10.1 20 95-116 249-268 (310) 105 d1ep3b2 c.25.1.3 (B:103-262) D 20.5 21 0.0015 13.4 6.1 37 3-41 8-45 (160) 106 d2ffea1 c.143.1.1 (A:1-309) LP 20.2 22 0.0016 13.3 2.3 27 12-38 5-31 (309) 107 d2djia3 c.36.1.9 (A:364-592) P 20.1 17 0.0012 14.0 1.1 12 46-57 89-100 (229) No 1 >d1jkxa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=0 Score=376.63 Aligned_cols=200 Identities=39% Similarity=0.704 Sum_probs=194.9 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC Q ss_conf 65999976985018999999973999847999997688887888998608950463013233221012432100012343 Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP 83 (205) Q Consensus 4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~ 83 (205) +|||||+||+||||++|+++++.++++++|++|+||++++.+++++++.+++.+....+.+..+..++..+.+.++++++ T Consensus 1 MkIaVl~SG~GSnL~aLl~a~~~~~l~~~I~~Visn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~ 80 (209) T d1jkxa_ 1 MNIVVLISGNGSNLQAIIDACKTNKIKGTVRAVFSNKADAFGLERARQAGIATHTLIASAFDSREAYDRELIHEIDMYAP 80 (209) T ss_dssp CEEEEEESSCCHHHHHHHHHHHTTSSSSEEEEEEESCTTCHHHHHHHHTTCEEEECCGGGCSSHHHHHHHHHHHHGGGCC T ss_pred CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHHHHCCC T ss_conf 98999981682779999999871899978999995798753120120134320232001234433348999999986099 Q ss_pred EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC Q ss_conf 03643112220572132106654231353223332444212100002465344530331232186626778998718998 Q gi|254780570|r 84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD 163 (205) Q Consensus 84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d 163 (205) |++|++|||+|+|+++++.|++++||+||||||+|||++|++|++.||++++|+|+|+|++++|+||||.|++++|.++| T Consensus 81 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~~rG~~p~~~~i~~g~~~~G~t~h~~~~~~D~G~Ii~q~~~~i~~~d 160 (209) T d1jkxa_ 81 DVVVLAGFMRILSPAFVSHYAGRLLNIHPSLLPKYPGLHTHRQALENGDEEHGTSVHFVTDELDGGPVILQAKVPVFAGD 160 (209) T ss_dssp SEEEESSCCSCCCHHHHHHTTTSEEEEESSCTTSCCSSCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEEEEEECCTTC T ss_pred CEEEEEEEEEECCHHHHCCCCCCEEEECCCHHCCCCCCCCHHHHHHCCCEEECCEEEEECCCCCCCCEEEEEEECCCCCC T ss_conf 88998305686170553023367797077311036776754679987981103338984577886337567897379997 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCEEEEEC Q ss_conf 9999999999999999999999998695699898699950 Q gi|254780570|r 164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDHHHLIG 203 (205) Q Consensus 164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~~~~~~ 203 (205) |+++|++|++.+|+++|+++|+++++|++.+.++++.+.| T Consensus 161 ~~~~l~~k~~~~e~~l~~~~i~~i~~~~i~~~~~~~~~~~ 200 (209) T d1jkxa_ 161 SEDDITARVQTQEHAIYPLVISWFADGRLKMHENAAWLDG 200 (209) T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHTTCEEEETTEEEETT T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCEEEECC T ss_conf 9999999999999999999999998099688599889999 No 2 >d1meoa_ c.65.1.1 (A:) Glycinamide ribonucleotide transformylase, GART {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=0 Score=361.48 Aligned_cols=195 Identities=41% Similarity=0.685 Sum_probs=189.3 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCC Q ss_conf 65999976985018999999973999847999997688887888998608950463013233221012432100012343 Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQP 83 (205) Q Consensus 4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~ 83 (205) .|+|||+||+||||++|++++++++++++|++|+||+|+++++++++..+++...+..+....++.++.++.+.++++++ T Consensus 1 ~ri~vl~SG~Gsnl~aLl~~~~~~~l~~~I~~Vitn~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~ 80 (205) T d1meoa_ 1 ARVAVLISGTGSNLQALIDSTREPNSSAQIDIVISNKAAVAGLDKAERAGIPTRVINHKLYKNRVEFDSAIDLVLEEFSI 80 (205) T ss_dssp CEEEEEESSSCTTHHHHHHHHHSTTCSCEEEEEEESSTTCHHHHHHHHTTCCEEECCGGGSSSHHHHHHHHHHHHHHTTC T ss_pred CEEEEEEECCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCC T ss_conf 98999983781759999999766999978999997873323031133322222112444210023578999999850165 Q ss_pred EEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEECCCCC Q ss_conf 03643112220572132106654231353223332444212100002465344530331232186626778998718998 Q gi|254780570|r 84 DLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQD 163 (205) Q Consensus 84 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i~~~d 163 (205) |+++++|||+|+|+++++.|++++||+||||||+|||++|++||+.+|++++|+|+|+|++++|+|||+.|++++|.++| T Consensus 81 Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~~rG~~~~~~ai~~g~~~~G~tih~v~~~iD~G~Ii~q~~~~I~~~d 160 (205) T d1meoa_ 81 DIVCLAGFMRILSGPFVQKWNGKMLNIHPSLLPSFKGSNAHEQALETGVTVTGCTVHFVAEDVDAGQIILQEAVPVKRGD 160 (205) T ss_dssp CEEEEESCCSCCCHHHHHHTTTSEEEEESSSTTSSCSSCHHHHHHHHTCSEEEEEEEECCC---CCCEEEEEEEECCTTC T ss_pred CEEEEECHHCCCCHHHHHHCCCCEEECCCCCCCHHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCC T ss_conf 43342002200687888732577352376422111100048899863986510247863477897747689997799997 Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCE Q ss_conf 99999999999999999999999986956998986 Q gi|254780570|r 164 TESSLSQKVLSAEHLLYPLALKYTILGKTSNSNDH 198 (205) Q Consensus 164 ~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~~~ 198 (205) |+++|++|++.+|+++|+++|+.+++|++...++. T Consensus 161 t~~~L~~k~~~~~~~l~~~~l~~i~~g~i~~~~~~ 195 (205) T d1meoa_ 161 TVATLSERVKLAEHKIFPAALQLVASGTVQLGENG 195 (205) T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHTSEEECTTS T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHCCCCEECCCC T ss_conf 99999999999999999999999985994788997 No 3 >d2bw0a2 c.65.1.1 (A:1-203) 10-formyltetrahydrofolate dehydrogenase domain 1 {Human (Homo sapiens) [TaxId: 9606]} Probab=100.00 E-value=1.4e-35 Score=262.90 Aligned_cols=186 Identities=20% Similarity=0.282 Sum_probs=154.8 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC----CCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC Q ss_conf 65999976985018999999973999847999997688----88788899860895046301323322101243210001 Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS----NAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS 79 (205) Q Consensus 4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~----da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~ 79 (205) +||++| |+++....+++...+. +++|++|+|..+ .......|++++||.+.... ..++...+.++++.++ T Consensus 1 MkI~~~--G~~~~~~~~l~~L~~~--~~~i~~V~t~p~~~~~~~~v~~~a~~~~ipv~~~~~--~~~~~~~~~~~~~~l~ 74 (203) T d2bw0a2 1 MKIAVI--GQSLFGQEVYCHLRKE--GHEVVGVFTVPDKDGKADPLGLEAEKDGVPVFKYSR--WRAKGQALPDVVAKYQ 74 (203) T ss_dssp CEEEEE--CCHHHHHHHHHHHHHT--TCEEEEEEECCCCSSCCCHHHHHHHHHTCCEEECSC--CEETTEECHHHHHHHH T ss_pred CEEEEE--CCCHHHHHHHHHHHHC--CCCEEEEECCCCCCCCCCHHHHHHHHCCCCCCCCCC--CCCCCCCCHHHHHHHH T ss_conf 989998--5889999999999988--996899982898676777234447761986211321--1111215699999999 Q ss_pred CCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEEEEEEC Q ss_conf 23430364311222057213210665423135322333244421210000246534453033123218662677899871 Q gi|254780570|r 80 SIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPV 159 (205) Q Consensus 80 ~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q~~~~i 159 (205) +.+||++|++||++|||+++++.++.+++|+|||+||+|||++|++||+.+|++++|+|+|+|++++|+|+|+.|++++| T Consensus 75 ~~~~Dliv~~~~~~ii~~~~l~~~~~g~iN~H~slLP~yrG~~pi~wai~~g~~~~GvTih~~~~~~D~G~Ii~q~~~~i 154 (203) T d2bw0a2 75 ALGAELNVLPFCSQFIPMEIISAPRHGSIIYHPSLLPRHRGASAINWTLIHGDKKGGFSIFWADDGLDTGDLLLQKECEV 154 (203) T ss_dssp TTCCSEEEESSCSSCCCHHHHTCSTTCEEEEESSCTTTTBSSCHHHHHHHTTCSEEEEEEEECCSSSSCSCEEEEEEEEC T ss_pred HHCCCCEEEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCEEEEECCCCCCCHHHEEECCCC T ss_conf 71998369851101100232211156766653213311256430333201344566743687144456441220412468 Q ss_pred CCCCCHHHHHHHHH-HHHHHHHHHHHHHHHCCCEEEE Q ss_conf 89989999999999-9999999999999986956998 Q gi|254780570|r 160 SSQDTESSLSQKVL-SAEHLLYPLALKYTILGKTSNS 195 (205) Q Consensus 160 ~~~d~~~~l~~rv~-~~E~~l~~~~i~~~~~g~i~~~ 195 (205) .++||.++|+.|.+ .+..++++++++.+.+|++... T Consensus 155 ~~~dt~~~l~~k~l~~~~~~~~~~~l~~i~~g~~~~~ 191 (203) T d2bw0a2 155 LPDDTVSTLYNRFLFPEGIKGMVQAVRLIAEGKAPRL 191 (203) T ss_dssp CTTCCHHHHHHHTTTHHHHHHHHHHHHHHHHTCCCCB T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC T ss_conf 9875287999999999999999999999984999757 No 4 >d1fmta2 c.65.1.1 (A:1-206) Methionyl-tRNAfmet formyltransferase {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=2e-35 Score=261.80 Aligned_cols=182 Identities=21% Similarity=0.283 Sum_probs=151.1 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC----------CHHHHHHHHCCCCEEEEECCCCCCCCCHHH Q ss_conf 6659999769850189999999739998479999976888----------878889986089504630132332210124 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN----------AQGLVKARKEKVPTFPIPYKDYISRREHEK 72 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d----------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~ 72 (205) ++||++|+| +.....++++..+. +++|++|+|..++ ......+...++|....... .++ T Consensus 3 ~mKI~f~G~--~~~~~~~L~~L~~~--~~~i~~Vit~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~ 71 (206) T d1fmta2 3 SLRIIFAGT--PDFAARHLDALLSS--GHNVVGVFTQPDRPAGRGKKLMPSPVKVLAEEKGLPVFQPVSL-------RPQ 71 (206) T ss_dssp CCEEEEEEC--SHHHHHHHHHHHHT--TCEEEEEECCCCBC------CBCCHHHHHHHHTTCCEECCSCS-------CSH T ss_pred CCEEEEECC--CHHHHHHHHHHHHC--CCCEEEEEECCCCCCCCCCCCCCCCHHHHHHCCCCCCCCCCCC-------CCH T ss_conf 748999889--88999999999968--9977999969983013676223362321010037653222222-------211 Q ss_pred HHHHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEE Q ss_conf 32100012343036431122205721321066542313532233324442121000024653445303312321866267 Q gi|254780570|r 73 AILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPII 152 (205) Q Consensus 73 ~l~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii 152 (205) ...+.++..++|+++++||++++|+++++.|+.++||+|||+||+|||.+|++||+.||++++|+|+|+|++++|+|+|| T Consensus 72 ~~~~~~~~~~~d~~v~~~~~~ii~~~il~~~k~g~iN~Hps~LP~yRG~~pi~wai~nge~~~GvT~h~i~~~iD~G~Ii 151 (206) T d1fmta2 72 ENQQLVAELQADVMVVVAYGLILPKAVLEMPRLGCINVHGSLLPRWRGAAPIQRSLWAGDAETGVTIMQMDVGLDTGDML 151 (206) T ss_dssp HHHHHHHHTTCSEEEEESCCSCCCHHHHHSSTTCEEEEESSSTTTTBSSCHHHHHHHHTCSEEEEEEEECCSSSSCSCEE T ss_pred HHHHHHHHHCCEEEEEECCCCCCCHHHHHCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCEECEEEEEECCCCCHHHHH T ss_conf 46777764133278864122136654675387774525823567652000132588749823530688861555757764 Q ss_pred EEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 7899871899899999999999999999999999986956998 Q gi|254780570|r 153 AQAAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS 195 (205) Q Consensus 153 ~q~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~ 195 (205) .|++++|.++||..+|++|+..++.++++++|+.+.+|++.-. T Consensus 152 ~q~~~~i~~~dt~~~l~~k~~~~~~~l~~~~i~~i~~~~~~~~ 194 (206) T d1fmta2 152 YKLSCPITAEDTSGTLYDKLAELGPQGLITTLKQLADGTAKPE 194 (206) T ss_dssp EEEEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHHTCCCCB T ss_pred HHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 3001344335659999999999999999999999984998426 No 5 >d2blna2 c.65.1.1 (A:1-203) Polymyxin resistance protein ArnA, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=100.00 E-value=3.3e-35 Score=260.28 Aligned_cols=180 Identities=23% Similarity=0.344 Sum_probs=153.1 Q ss_pred CEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEECCCC-------CHHHHHHHHCCCCEEEEECCCCCCCCCHHHHH Q ss_conf 6599997698-50-189999999739998479999976888-------87888998608950463013233221012432 Q gi|254780570|r 4 KNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSDNSN-------AQGLVKARKEKVPTFPIPYKDYISRREHEKAI 74 (205) Q Consensus 4 ~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn~~d-------a~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l 74 (205) +|+++|+++. |. +|++|+++ +++|++|+|..++ +...+.|+++|||++....- .++++ T Consensus 1 Mkiv~~~~~~~g~~~l~~L~~~------g~~I~~Vvt~~~~~~~~~~~~~~~~~a~~~~i~~~~~~~~-------~~~~~ 67 (203) T d2blna2 1 MKTVVFAYHDMGCLGIEALLAA------GYEISAIFTHTDNPGEKAFYGSVARLAAERGIPVYAPDNV-------NHPLW 67 (203) T ss_dssp CEEEEEECHHHHHHHHHHHHHT------TCEEEEEECCCC------CCCCHHHHHHHHTCCEECCSCC-------CSHHH T ss_pred CEEEEEECCHHHHHHHHHHHHC------CCCEEEEECCCCCCCCCCCCCHHHHHHHHCCCCCEECCCC-------CCHHH T ss_conf 9399995577899999999978------9988999848999876666587899999859962211212-------10123 Q ss_pred HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE Q ss_conf 10001234303643112220572132106654231353223332444212100002465344530331232186626778 Q gi|254780570|r 75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ 154 (205) Q Consensus 75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q 154 (205) .+.+++.+||+++++||++|+|+++++.++.+++|+|||+||+|||.+|++|++.+|++++|+|+|+|++++|+|+|+.| T Consensus 68 ~~~i~~~~~Dlii~~g~~~ii~~~il~~~~~~~iN~H~slLP~yrG~~p~~wai~~g~~~~G~Tih~i~~~iD~G~Il~q 147 (203) T d2blna2 68 VERIAQLSPDVIFSFYYRHLIYDEILQLAPAGAFNLHGSLLPKYRGRAPLNWVLVNGETETGVTLHRMVKRADAGAIVAQ 147 (203) T ss_dssp HHHHHHTCCSEEEEESCCSCCCHHHHTTCTTCEEEEESSCTTTTEESCHHHHHHHTTCSEEEEEEEECCSSTTCSCEEEE T ss_pred HHHHHHHCCCCEEEEECCCCHHCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCEEE T ss_conf 44543203351465411100000110123778988755222055443234432303445543204775315777610035 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEC Q ss_conf 998718998999999999999999999999999869569989 Q gi|254780570|r 155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNSN 196 (205) Q Consensus 155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~~ 196 (205) ++++|.++||..+|++|+..++.+++.++++.+.+|++.... T Consensus 148 ~~~~i~~~~t~~~l~~k~~~~~~~l~~~~l~~i~~g~~~~~~ 189 (203) T d2blna2 148 LRIAIAPDDIAITLHHKLCHAARQLLEQTLPAIKHGNILEIA 189 (203) T ss_dssp EEEECCTTCCHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCBC T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEC T ss_conf 343342023589999999999999999999999869985145 No 6 >d1zgha2 c.65.1.1 (A:1-164) Methionyl-tRNAfmet formyltransferase {Clostridium thermocellum [TaxId: 1515]} Probab=99.91 E-value=7.5e-25 Score=188.87 Aligned_cols=114 Identities=15% Similarity=0.289 Sum_probs=100.1 Q ss_pred HHHCCCCCCEEEEEEEEEEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEECCCCCCCCEEEE Q ss_conf 10001234303643112220572132106654231353223332444212100002465344530331232186626778 Q gi|254780570|r 75 LMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQ 154 (205) Q Consensus 75 ~~~l~~~~~Dliv~~g~~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~~~~D~G~Ii~q 154 (205) .+.+++.+||+++++||++|+|+++++.+ +++|+|||+||+|||.+|+.||+.+|++++|+|+|+|++++|+|+|+.| T Consensus 40 ~~~i~~~~~D~ii~~g~~~ii~~~il~~~--~~in~H~s~LP~yRG~~p~~wai~~~~~~~Gvtih~~~~~iD~G~Ii~q 117 (164) T d1zgha2 40 FEKVKLINPEYILFPHWSWIIPKEIFENF--TCVVFHMTDLPFGRGGSPLQNLIERGIKKTKISAIKVDGGIDTGDIFFK 117 (164) T ss_dssp HHHHHHHCCSEEEESSCCSCCCHHHHTTS--CEEEEESSCTTTTEESCHHHHHHHTTCCEEEEEEEECCSSSSCSCEEEE T ss_pred HHHHHHCCCCEEEEECCCCCCCHHHHHHC--CCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCCCEEEE T ss_conf 99999609999999370230389999409--9820897801244233533310012335542036774067886778999 Q ss_pred EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEE Q ss_conf 99871899899999999999999999999999986956998 Q gi|254780570|r 155 AAVPVSSQDTESSLSQKVLSAEHLLYPLALKYTILGKTSNS 195 (205) Q Consensus 155 ~~~~i~~~d~~~~l~~rv~~~E~~l~~~~i~~~~~g~i~~~ 195 (205) +.+++. ||.+++..|... .++.+.++.+++++.... T Consensus 118 ~~~~i~--~~~~~~~~~~~~---~~~~~~i~~i~~~~~~~~ 153 (164) T d1zgha2 118 RDLDLY--GTAEEIFMRASK---IIFNDMIPELLTKRPVPQ 153 (164) T ss_dssp EEEECC--SCHHHHHHHHHH---HHHHTHHHHHHHHCCCCB T ss_pred EEECCC--CCHHHHHHHHHH---HHHHHHHHHHHCCCCEEE T ss_conf 997789--999999999999---999999999986998117 No 7 >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} Probab=95.89 E-value=0.031 Score=32.94 Aligned_cols=76 Identities=20% Similarity=0.261 Sum_probs=46.9 Q ss_pred CCC-CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC Q ss_conf 986-6599997698-50189999999739998479999976888878889986089504630132332210124321000 Q gi|254780570|r 1 MIR-KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL 78 (205) Q Consensus 1 M~k-~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l 78 (205) |.+ .|++|+++|+ |+.+ +++..+.. -..++.+|.+-++.+.++.+|+++++++..- +- +.+.+.. T Consensus 1 M~kkirvaIIGaG~ig~~~--~~~~l~~~-~~~el~avas~~~~~~~~~~a~~~~i~~~~~------~~----d~l~~~~ 67 (157) T d1nvmb1 1 MNQKLKVAIIGSGNIGTDL--MIKVLRNA-KYLEMGAMVGIDAASDGLARAQRMGVTTTYA------GV----EGLIKLP 67 (157) T ss_dssp CCSCEEEEEECCSHHHHHH--HHHHHHHC-SSEEEEEEECSCTTCHHHHHHHHTTCCEESS------HH----HHHHHSG T ss_pred CCCCCEEEEECCCHHHHHH--HHHHHHHC-CCCEEEEEEECCHHCCCHHHHHHCCCCCCCC------CE----EEEEECC T ss_conf 9987679998685999999--99999619-8655999985533203103566539740005------61----5665024 Q ss_pred CCCCCEEEEEE Q ss_conf 12343036431 Q gi|254780570|r 79 SSIQPDLICLA 89 (205) Q Consensus 79 ~~~~~Dliv~~ 89 (205) +..++|+++.+ T Consensus 68 ~~~~iDiVf~A 78 (157) T d1nvmb1 68 EFADIDFVFDA 78 (157) T ss_dssp GGGGEEEEEEC T ss_pred CCCCCCEEEEC T ss_conf 55546889982 No 8 >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} Probab=93.39 E-value=0.12 Score=28.83 Aligned_cols=56 Identities=11% Similarity=0.151 Sum_probs=39.4 Q ss_pred CCEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC Q ss_conf 66599997698--501899999997399984799999768888788899860895046301 Q gi|254780570|r 3 RKNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY 61 (205) Q Consensus 3 k~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~ 61 (205) .|||+||+|.+ |++...+++... -.++|.++-+++.-..-.+.+++++-++.++.. T Consensus 2 pK~I~IlGsTGSIG~~tL~Vi~~~~---d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d 59 (150) T d1r0ka2 2 PRTVTVLGATGSIGHSTLDLIERNL---DRYQVIALTANRNVKDLADAAKRTNAKRAVIAD 59 (150) T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTG---GGEEEEEEEESSCHHHHHHHHHHTTCSEEEESC T ss_pred CCEEEEECCCCHHHHHHHHHHHCCC---CCCEEEEEEECCCHHHHHHHHHHHCCCCCEECC T ss_conf 9589998879699999999998197---771899999579789988888753444303211 No 9 >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} Probab=92.41 E-value=0.19 Score=27.49 Aligned_cols=54 Identities=13% Similarity=0.130 Sum_probs=36.9 Q ss_pred CEEEEEECCC--CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEE Q ss_conf 6599997698--50189999999739998479999976888878889986089504630 Q gi|254780570|r 4 KNIVIFISGE--GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIP 60 (205) Q Consensus 4 ~riavl~SG~--Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~ 60 (205) |||+||.|.+ |++...+++. ..-.++|.++.+++.-..-.+.+++++-++.++. T Consensus 2 K~I~IlGsTGSIG~~tL~Vi~~---~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~ 57 (151) T d1q0qa2 2 KQLTILGSTGSIGCSTLDVVRH---NPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMD 57 (151) T ss_dssp EEEEEETTTSHHHHHHHHHHHH---CTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEES T ss_pred CEEEEECCCCHHHHHHHHHHHH---CCCCCEEEEEEECCCHHHHHHHHHHHHHCCCCCC T ss_conf 7699975796999999999993---9788489999955968889999998764212335 No 10 >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} Probab=91.19 E-value=0.48 Score=24.75 Aligned_cols=73 Identities=22% Similarity=0.064 Sum_probs=41.0 Q ss_pred CCCCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC Q ss_conf 9866599997698501899-999997399984799999768888788899860895046301323322101243210001 Q gi|254780570|r 1 MIRKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS 79 (205) Q Consensus 1 M~k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~ 79 (205) |.|.|+++. |.|+-... .+.+.++-.-.+++++|++.++ ...-+.+++++++... .+ + -+.++ T Consensus 1 MkkirigiI--G~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~-~~~~~~~~~~~~~~~~------~~---~----~ell~ 64 (181) T d1zh8a1 1 LRKIRLGIV--GCGIAARELHLPALKNLSHLFEITAVTSRTR-SHAEEFAKMVGNPAVF------DS---Y----EELLE 64 (181) T ss_dssp CCCEEEEEE--CCSHHHHHTHHHHHHTTTTTEEEEEEECSSH-HHHHHHHHHHSSCEEE------SC---H----HHHHH T ss_pred CCCCEEEEE--CCCHHHHHHHHHHHHHCCCCEEEEEEEECCH-HHHHHHHCCCCCCCEE------EE---E----ECCCC T ss_conf 997679999--4989999999999984899758999982627-6665410101223203------32---2----00233 Q ss_pred CCCCEEEEEE Q ss_conf 2343036431 Q gi|254780570|r 80 SIQPDLICLA 89 (205) Q Consensus 80 ~~~~Dliv~~ 89 (205) +.++|.++.+ T Consensus 65 ~~~id~v~I~ 74 (181) T d1zh8a1 65 SGLVDAVDLT 74 (181) T ss_dssp SSCCSEEEEC T ss_pred CCCCCEEECC T ss_conf 3333122012 No 11 >d2d13a1 c.26.2.1 (A:2-227) Hypothetical protein PH1257 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Probab=90.08 E-value=0.61 Score=23.98 Aligned_cols=80 Identities=18% Similarity=0.187 Sum_probs=50.9 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEEC-C--CCC--------HHH-HHHHHCCCCEEEEECCCCCCCCC Q ss_conf 66599997698-50189999999739998479999976-8--888--------788-89986089504630132332210 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSD-N--SNA--------QGL-VKARKEKVPTFPIPYKDYISRRE 69 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn-~--~da--------~~l-~~a~~~~Ip~~~i~~~~~~~~~~ 69 (205) .+|++++.||+ .|+ .++..+.+++ .+|++.+|- . .++ ..+ ..|+..|||........ ..+. T Consensus 3 ~~~V~vl~SGGKDS~-lAl~~a~~~G---~eV~~L~t~~~~~~~s~~~h~~~~~ll~~qAealgiPl~~~~~~~--~~e~ 76 (226) T d2d13a1 3 LADVAVLYSGGKDSN-YALYWALKSG---LRVRYLVSMVSENEESYMYHTPNVELTSLQARALGIPIIKGFTKG--EKEK 76 (226) T ss_dssp SCEEEEECCSSHHHH-HHHHHHHHTT---CEEEEEEEEECCC---------CCTTHHHHHHHHTCCEEEEEC----CTTS T ss_pred CEEEEEEECCCHHHH-HHHHHHHHCC---CEEEEEEEEECCCCCCCCCCCCCHHHHHHHHHHCCCCCEEEECCC--CCHH T ss_conf 221999926869999-9999999859---905999998437899671657889999999986389826873478--6129 Q ss_pred HHHHHHHHCCCCCCEEEEE Q ss_conf 1243210001234303643 Q gi|254780570|r 70 HEKAILMQLSSIQPDLICL 88 (205) Q Consensus 70 ~~~~l~~~l~~~~~Dliv~ 88 (205) +-+++.+.+++.++|-++. T Consensus 77 ~~~~l~~~l~~~~v~~vv~ 95 (226) T d2d13a1 77 EVEDLKNVLEGLKVDGIVA 95 (226) T ss_dssp HHHHHHHHHHTBCCSEEEC T ss_pred HHHHHHHHHHHCCCCCEEE T ss_conf 9999999998607253676 No 12 >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} Probab=88.68 E-value=0.71 Score=23.55 Aligned_cols=75 Identities=15% Similarity=-0.011 Sum_probs=41.1 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC Q ss_conf 66599997698501899999997399984799999768888788899860895046301323322101243210001234 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ 82 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~ 82 (205) |.|+++.+.| +-.+..+++.+..+ .++++.|.+.++ ...-+.++++++|...--+ . . +-+.+++.+ T Consensus 1 kiki~iIG~G--~~g~~~~~~l~~~~-~~~i~ai~d~~~-~~~~~~~~~~~~~~~~~~~---~---~----~~~ll~~~~ 66 (184) T d1ydwa1 1 QIRIGVMGCA--DIARKVSRAIHLAP-NATISGVASRSL-EKAKAFATANNYPESTKIH---G---S----YESLLEDPE 66 (184) T ss_dssp CEEEEEESCC--TTHHHHHHHHHHCT-TEEEEEEECSSH-HHHHHHHHHTTCCTTCEEE---S---S----HHHHHHCTT T ss_pred CEEEEEECCC--HHHHHHHHHHHHCC-CCEEEEEEECCC-CCCCCCHHCCCCCCCEEEC---C---C----HHHHHHCCC T ss_conf 9699999697--99999999998689-978999996782-0032101013455301212---7---6----787521132 Q ss_pred CEEEEEEEE Q ss_conf 303643112 Q gi|254780570|r 83 PDLICLAGY 91 (205) Q Consensus 83 ~Dliv~~g~ 91 (205) +|+++.+.. T Consensus 67 iD~v~I~tp 75 (184) T d1ydwa1 67 IDALYVPLP 75 (184) T ss_dssp CCEEEECCC T ss_pred CCEEEECCC T ss_conf 102420232 No 13 >d1f0ka_ c.87.1.2 (A:) Peptidoglycan biosynthesis glycosyltransferase MurG {Escherichia coli [TaxId: 562]} Probab=87.16 E-value=0.95 Score=22.68 Aligned_cols=83 Identities=11% Similarity=0.086 Sum_probs=48.6 Q ss_pred CEEEEEECCC-CHH--HHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCC------------ Q ss_conf 6599997698-501--8999999973999847999997688887888998608950463013233221------------ Q gi|254780570|r 4 KNIVIFISGE-GTN--MLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRR------------ 68 (205) Q Consensus 4 ~riavl~SG~-Gsn--l~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~------------ 68 (205) |||.++.+|+ |+. +.+|.+...+. +++|..+.+.. ....+..++.+.++..++...+..+. T Consensus 1 kkili~~~GtGGHv~~a~al~~~L~~~--G~eV~~i~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 76 (351) T d1f0ka_ 1 KRLMVMAGGTGGHVFPGLAVAHHLMAQ--GWQVRWLGTAD--RMEADLVPKHGIEIDFIRISGLRGKGIKALIAAPLRIF 76 (351) T ss_dssp CEEEEECCSSHHHHHHHHHHHHHHHTT--TCEEEEEECTT--STHHHHGGGGTCEEEECCCCCCTTCCHHHHHTCHHHHH T ss_pred CEEEEECCCCHHHHHHHHHHHHHHHHC--CCEEEEEEECC--CCHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHH T ss_conf 979998388589899999999999858--99899999588--32432235049957999788867777799999998877 Q ss_pred CHHHHHHHHCCCCCCEEEEEEE Q ss_conf 0124321000123430364311 Q gi|254780570|r 69 EHEKAILMQLSSIQPDLICLAG 90 (205) Q Consensus 69 ~~~~~l~~~l~~~~~Dliv~~g 90 (205) ..-......+.+..+|.+++.+ T Consensus 77 ~~~~~~~~i~~~~~~~~~~~~~ 98 (351) T d1f0ka_ 77 NAWRQARAIMKAYKPDVVLGMG 98 (351) T ss_dssp HHHHHHHHHHHHHCCSEEEECS T ss_pred HHHHHHHHHHHCCCCCEEEECC T ss_conf 7677778876313443001103 No 14 >d1ni5a1 c.26.2.5 (A:0-226) tRNA-Ile-lysidine synthetase, TilS, N-terminal domain {Escherichia coli [TaxId: 562]} Probab=86.14 E-value=1.1 Score=22.32 Aligned_cols=60 Identities=13% Similarity=0.180 Sum_probs=41.3 Q ss_pred CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEEC---CCCC-----HHHHHHHHCCCCEEEEECC Q ss_conf 66599997698-50-189999999739998479999976---8888-----7888998608950463013 Q gi|254780570|r 3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSD---NSNA-----QGLVKARKEKVPTFPIPYK 62 (205) Q Consensus 3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn---~~da-----~~l~~a~~~~Ip~~~i~~~ 62 (205) ++|++|=+||+ .| .|..++..+.....+.++.++.-| ++++ ...+.|+++++|+++.... T Consensus 13 ~kkvlva~SGG~DS~~Ll~ll~~~~~~~~~~~l~~~~vdh~~r~~s~~~~~~~~~~~~~~~i~~~i~~~~ 82 (227) T d1ni5a1 13 SRQILVAFSGGLDSTVLLHQLVQWRTENPGVALRAIHVHHGLSANADAWVTHCENVCQQWQVPLVVERVQ 82 (227) T ss_dssp CSEEEEECCSBHHHHHHHHHHHHHHTTSTTCEEEEEEECCSCCSSHHHHHHHHHHHHHHTTCCEEEECCC T ss_pred CCCEEEEECCCHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCCCEEEECC T ss_conf 9968999638499999999999998758895699998678987521445899999975415763266313 No 15 >d1pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Escherichia coli [TaxId: 562]} Probab=85.07 E-value=0.9 Score=22.83 Aligned_cols=33 Identities=21% Similarity=0.496 Sum_probs=20.0 Q ss_pred CCCCEEEEEECCCCH-H----HHHHHHHHHCCCCCCEEEEE Q ss_conf 986659999769850-1----89999999739998479999 Q gi|254780570|r 1 MIRKNIVIFISGEGT-N----MLSLIQATKKNDYPAEIVGV 36 (205) Q Consensus 1 M~k~riavl~SG~Gs-n----l~~Il~~~~~~~~~~eI~~V 36 (205) ||| ||+||-||..+ . +..+++..... +.+|.++ T Consensus 1 ~mk-rIgIltsGG~~pg~Na~i~~~v~~~~~~--~~~v~g~ 38 (320) T d1pfka_ 1 MIK-KIGVLTSGGDAPGMNAAIRGVVRSALTE--GLEVMGI 38 (320) T ss_dssp CCC-EEEEEECSSCCTTHHHHHHHHHHHHHHT--TCEEEEE T ss_pred CCC-EEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEE T ss_conf 986-4999866888668899999999999878--9989999 No 16 >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} Probab=84.65 E-value=0.91 Score=22.82 Aligned_cols=88 Identities=15% Similarity=0.125 Sum_probs=36.6 Q ss_pred CCCCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC--CCEEEEECCCCCCCCCHHHHHHHH Q ss_conf 986659999769850189-99999973999847999997688887888998608--950463013233221012432100 Q gi|254780570|r 1 MIRKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEK--VPTFPIPYKDYISRREHEKAILMQ 77 (205) Q Consensus 1 M~k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~--Ip~~~i~~~~~~~~~~~~~~l~~~ 77 (205) |.+|.+ |+.|..|.+= ++.+...+......|. .+.|.....-+.++..+ +..+.++..+..+-+.+-+.+.+. T Consensus 1 M~~Kti--lITGassGIG~a~a~~la~~G~~~~Vi--~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~ 76 (250) T d1yo6a1 1 MSPGSV--VVTGANRGIGLGLVQQLVKDKNIRHII--ATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEI 76 (250) T ss_dssp CCCSEE--EESSCSSHHHHHHHHHHHTCTTCCEEE--EEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHH T ss_pred CCCCEE--EEECCCCHHHHHHHHHHHHCCCCCEEE--EEECCHHHHHHHHHHHCCCEEEEEEECCCHHHHHHHHHHHHHH T ss_conf 968989--995898799999999999779987899--9969999999998720896699998468999999999999999 Q ss_pred CCCCCCEEEE-EEEEE Q ss_conf 0123430364-31122 Q gi|254780570|r 78 LSSIQPDLIC-LAGYM 92 (205) Q Consensus 78 l~~~~~Dliv-~~g~~ 92 (205) +....+|++| .||.+ T Consensus 77 ~~~~~idilinnAG~~ 92 (250) T d1yo6a1 77 VGSDGLSLLINNAGVL 92 (250) T ss_dssp HGGGCCCEEEECCCCC T ss_pred HCCCCEEEEEECCCCC T ss_conf 5899848999767656 No 17 >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} Probab=84.36 E-value=1 Score=22.48 Aligned_cols=94 Identities=15% Similarity=0.201 Sum_probs=53.9 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCCC Q ss_conf 66599997698501899999997399984799999768888788899860895046301323322101243210001234 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSIQ 82 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~ 82 (205) ..||+|+ |.|.-.+-+..+.+ ++++++ .|+...+++.+-..|.. +++.++.+. +.+.+.....+ T Consensus 11 ~~kigIl--GgGQL~rMla~aA~--~lG~~v-~v~d~~~~~PA~~va~~----~i~~~~~d~-------~~l~~~~~~~~ 74 (111) T d1kjqa2 11 ATRVMLL--GSGELGKEVAIECQ--RLGVEV-IAVDRYADAPAMHVAHR----SHVINMLDG-------DALRRVVELEK 74 (111) T ss_dssp CCEEEEE--SCSHHHHHHHHHHH--TTTCEE-EEEESSTTCGGGGGSSE----EEECCTTCH-------HHHHHHHHHHC T ss_pred CCEEEEE--ECCHHHHHHHHHHH--HCCCEE-EEECCCCCCCHHHCCCE----EEECCCCCH-------HHHHHHHHHHC T ss_conf 9799999--37798999999999--889989-99849999836551776----899887899-------99999998627 Q ss_pred CEEEEEEEEEEECCCHHHHCCCCCEEECCCCC Q ss_conf 30364311222057213210665423135322 Q gi|254780570|r 83 PDLICLAGYMRLLSRDFVESYKNKILNIHPSL 114 (205) Q Consensus 83 ~Dliv~~g~~~il~~~~l~~~~~~~iN~Hpsl 114 (205) +|+|..- | --++.+.++......+++|||. T Consensus 75 ~DviT~E-~-EnI~~~~L~~le~~g~~v~Ps~ 104 (111) T d1kjqa2 75 PHYIVPE-I-EAIATDMLIQLEEEGLNVVPCA 104 (111) T ss_dssp CSEEEEC-S-SCSCHHHHHHHHHTTCEESSCH T ss_pred CCEEEEE-E-CCCCHHHHHHHHHCCCEECCCH T ss_conf 7568887-3-6768999999997798577798 No 18 >d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]} Probab=80.20 E-value=1.8 Score=20.74 Aligned_cols=112 Identities=21% Similarity=0.268 Sum_probs=57.7 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECC------------CCCCCCCH Q ss_conf 665999976985018999999973999847999997688887888998608950463013------------23322101 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYK------------DYISRREH 70 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~------------~~~~~~~~ 70 (205) .|+|||+ |.||--.+=-...+.. ..+| ++-.++++...++|++.|.....+... |..-++.| T Consensus 16 ~k~IaVi--GYGsQG~AhAlNLrDS--G~~V--~VGLr~gs~s~~~A~~~Gf~v~~~~eA~~~aDiim~L~PD~~q~~vy 89 (182) T d1np3a2 16 GKKVAII--GYGSQGHAHACNLKDS--GVDV--TVGLRSGSATVAKAEAHGLKVADVKTAVAAADVVMILTPDEFQGRLY 89 (182) T ss_dssp TSCEEEE--CCSHHHHHHHHHHHHT--TCCE--EEECCTTCHHHHHHHHTTCEEECHHHHHHTCSEEEECSCHHHHHHHH T ss_pred CCEEEEE--EECCHHHHHHHHHHHC--CCCE--EEECCCCCCCHHHHHHHCCCCCCHHHHHHHCCEEEEECCHHHHHHHH T ss_conf 9979999--1371768887551634--9988--99757888437777540534346899864468200104067778999 Q ss_pred HHHHHHHCCCCCCEEEEEEEE----EEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCC Q ss_conf 243210001234303643112----2205721321066542313532233324442121000024 Q gi|254780570|r 71 EKAILMQLSSIQPDLICLAGY----MRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSG 131 (205) Q Consensus 71 ~~~l~~~l~~~~~Dliv~~g~----~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g 131 (205) ++.+...++. .--|.+..|| .+|.|++-++- +-+ =|+-+| +.+.+.+.+| T Consensus 90 ~~~I~p~lk~-g~~L~FaHGfnIh~~~I~pp~~vdV-----~mv----APKgpG-~~VR~~y~~G 143 (182) T d1np3a2 90 KEEIEPNLKK-GATLAFAHGFSIHYNQVVPRADLDV-----IMI----APKAPG-HTVRSEFVKG 143 (182) T ss_dssp HHHTGGGCCT-TCEEEESCCHHHHTTSSCCCTTCEE-----EEE----EESSCS-HHHHHHHHTT T ss_pred HHHHHHHCCC-CCEEEEECCCEEEEEEEECCCCCCE-----EEE----CCCCCC-CHHHHHHHCC T ss_conf 8766652587-8679870442487623654788754-----866----454552-1068886367 No 19 >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} Probab=76.27 E-value=2.3 Score=19.97 Aligned_cols=39 Identities=26% Similarity=0.374 Sum_probs=27.2 Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCC Q ss_conf 986659999769850189999999739998479999976888 Q gi|254780570|r 1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSN 42 (205) Q Consensus 1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d 42 (205) |.|.|++|. |.|.--+..++++++.. +++++.|++.++. T Consensus 1 M~kirvgii--G~G~ig~~~~~~l~~~~-~~elvav~~~~~~ 39 (170) T d1f06a1 1 MTNIRVAIV--GYGNLGRSVEKLIAKQP-DMDLVGIFSRRAT 39 (170) T ss_dssp CCCEEEEEE--CCSHHHHHHHHHHTTCS-SEEEEEEEESSSC T ss_pred CCCCEEEEE--CCHHHHHHHHHHHHHCC-CCEEEEEEECCCC T ss_conf 985569998--97099999999998589-9689999701434 No 20 >d1wy5a1 c.26.2.5 (A:1-216) TilS-like protein Aq_1887 {Aquifex aeolicus [TaxId: 63363]} Probab=76.09 E-value=2.4 Score=19.94 Aligned_cols=88 Identities=18% Similarity=0.106 Sum_probs=46.5 Q ss_pred CCEEEEEECCCC-H-HHHHHHHHHHCCCCC-CEEEEEEECC---CCC-----HHHHHHHHCCCCEEEEECCCCC----CC Q ss_conf 665999976985-0-189999999739998-4799999768---888-----7888998608950463013233----22 Q gi|254780570|r 3 RKNIVIFISGEG-T-NMLSLIQATKKNDYP-AEIVGVFSDN---SNA-----QGLVKARKEKVPTFPIPYKDYI----SR 67 (205) Q Consensus 3 k~riavl~SG~G-s-nl~~Il~~~~~~~~~-~eI~~Visn~---~da-----~~l~~a~~~~Ip~~~i~~~~~~----~~ 67 (205) .+||+|=+||+- | .|..++..... ..+ .++..+..|. +++ ...+.|++.|||+++....... .+ T Consensus 24 ~~kv~Va~SGG~DS~~Ll~lL~~~~~-~~~~~~i~~~~vdh~~r~~s~~~~~~~~~~~~~l~i~~~i~~~~~~~~~~~~~ 102 (216) T d1wy5a1 24 ERRVLIAFSGGVDSVVLTDVLLKLKN-YFSLKEVALAHFNHMLRESAERDEEFCKEFAKERNMKIFVGKEDVRAFAKENR 102 (216) T ss_dssp CCEEEEECCSSHHHHHHHHHHHHSTT-TTTCSEEEEEEEECCSSTHHHHHHHHHHHHHHHHTCCEEEEECCHHHHHHHTT T ss_pred CCEEEEEECCCHHHHHHHHHHHHHHH-HCCCCCEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHCCCCC T ss_conf 98699996785999999999999987-66877088887511234103321347899998620001021021011113776 Q ss_pred ---CCH-----HHHHHHHCCCCCCEEEEEEEE Q ss_conf ---101-----243210001234303643112 Q gi|254780570|r 68 ---REH-----EKAILMQLSSIQPDLICLAGY 91 (205) Q Consensus 68 ---~~~-----~~~l~~~l~~~~~Dliv~~g~ 91 (205) +.. -..+.+..++.+.|.|+++-. T Consensus 103 ~~~~~~~R~~Ry~~l~~~a~~~~~~~ia~GH~ 134 (216) T d1wy5a1 103 MSLEEAGRFLRYKFLKEILESEGFDCIATAHH 134 (216) T ss_dssp CCHHHHHHHHHHHHHHHHHHHTTCSEEECCCC T ss_pred CCHHHHHHHHHHHHHHHHCCCCCCCEEEEEEE T ss_conf 44578799999887641111223121576520 No 21 >d1pvva2 c.78.1.1 (A:151-313) Ornithine transcarbamoylase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=74.03 E-value=1.4 Score=21.47 Aligned_cols=26 Identities=27% Similarity=0.425 Sum_probs=20.5 Q ss_pred ECCCHHHHCCCCCEEECCCCCCCCCCCC Q ss_conf 0572132106654231353223332444 Q gi|254780570|r 94 LLSRDFVESYKNKILNIHPSLLPLFPGL 121 (205) Q Consensus 94 il~~~~l~~~~~~~iN~HpslLP~yrG~ 121 (205) .++.++++..+..++=+|| ||..||. T Consensus 101 ~v~~~~l~~ak~~~iimHp--lP~~Rg~ 126 (163) T d1pvva2 101 QVNKDLVKHAKPDYMFMHC--LPAHRGE 126 (163) T ss_dssp CBCHHHHHTSCTTCEEEEC--SCCCBTT T ss_pred HHHHHHHHHHCCCEEEECC--CCCCCCC T ss_conf 6878998761877599458--7532564 No 22 >d1v4va_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Thermus thermophilus [TaxId: 274]} Probab=72.62 E-value=2.9 Score=19.37 Aligned_cols=112 Identities=9% Similarity=0.015 Sum_probs=55.7 Q ss_pred CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE-EEEECC-CCCCC----CCHHHHHH Q ss_conf 65999976985--018999999973999847999997688887888998608950-463013-23322----10124321 Q gi|254780570|r 4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT-FPIPYK-DYISR----REHEKAIL 75 (205) Q Consensus 4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~-~~i~~~-~~~~~----~~~~~~l~ 75 (205) |||+++...+. .-+..|++++++.+ +++..+|+|...-....+--+..++.. ..++.. +..+. ...-..+. T Consensus 3 kkI~~v~GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~i~~d~~l~~~~~~~s~~~~~~~~~~~~~ 81 (373) T d1v4va_ 3 KRVVLAFGTRPEATKMAPVYLALRGIP-GLKPLVLLTGQHREQLRQALSLFGIQEDRNLDVMQERQALPDLAARILPQAA 81 (373) T ss_dssp EEEEEEECSHHHHHHHHHHHHHHHTST-TEEEEEEECSSCHHHHHHHHHTTTCCCSEECCCCSSCCCHHHHHHHHHHHHH T ss_pred CEEEEEEEHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHCCCHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHH T ss_conf 769999873697999999999997189-9988999926882556371224088866567878888877899999999876 Q ss_pred HHCCCCCCEEEEEEEEE-EECCCHHHH-CCCCCEEECCCCCCC Q ss_conf 00012343036431122-205721321-066542313532233 Q gi|254780570|r 76 MQLSSIQPDLICLAGYM-RLLSRDFVE-SYKNKILNIHPSLLP 116 (205) Q Consensus 76 ~~l~~~~~Dliv~~g~~-~il~~~~l~-~~~~~~iN~HpslLP 116 (205) +.+.+.+||+|++.|=. -.+..-+.. ..+..++-+|.++.. T Consensus 82 ~~l~~~kPD~vlv~GDr~e~la~a~aa~~~~ipi~HiegG~rs 124 (373) T d1v4va_ 82 RALKEMGADYVLVHGDTLTTFAVAWAAFLEGIPVGHVEAGLRS 124 (373) T ss_dssp HHHHHTTCSEEEEESSCHHHHHHHHHHHHTTCCEEEETCCCCC T ss_pred HHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHEEECCCCCC T ss_conf 6664037640011136753103778898762122241343455 No 23 >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} Probab=71.36 E-value=2 Score=20.52 Aligned_cols=31 Identities=26% Similarity=0.360 Sum_probs=17.6 Q ss_pred CCCCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 9866599997698-50189999999739998479999 Q gi|254780570|r 1 MIRKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV 36 (205) Q Consensus 1 M~k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V 36 (205) |..+||+|+++|. ||.+-.++- .+ +.+|.+. T Consensus 5 ~~m~KI~ViGaG~wGtAlA~~La---~~--g~~V~l~ 36 (189) T d1n1ea2 5 LYLNKAVVFGSGAFGTALAMVLS---KK--CREVCVW 36 (189) T ss_dssp CCEEEEEEECCSHHHHHHHHHHH---TT--EEEEEEE T ss_pred CEECEEEEECCCHHHHHHHHHHH---HC--CCEEEEE T ss_conf 10156999998999999999999---75--9968999 No 24 >d1b74a1 c.78.2.1 (A:1-105) Glutamate racemase {Aquifex pyrophilus [TaxId: 2714]} Probab=69.34 E-value=3.4 Score=18.89 Aligned_cols=93 Identities=19% Similarity=0.151 Sum_probs=46.9 Q ss_pred CEEEEEECCCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 65999976985--0189999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 4 KNIVIFISGEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 4 ~riavl~SG~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) +||+||=||-| |-++.|.+.. .+.++.- +-|+.. .|+=. +....-..+-.++.+.+.+. T Consensus 1 mkIgifDSGiGGLtVl~~l~~~l----P~~~~iY-~~D~a~-----------~PYG~---ks~~~I~~~~~~~~~~l~~~ 61 (105) T d1b74a1 1 MKIGIFDSGVGGLTVLKAIRNRY----RKVDIVY-LGDTAR-----------VPYGI---RSKDTIIRYSLECAGFLKDK 61 (105) T ss_dssp CEEEEEESSSTHHHHHHHHHHHS----SSCEEEE-EECGGG-----------CCGGG---SCHHHHHHHHHHHHHHHHTT T ss_pred CEEEEEECCCCHHHHHHHHHHHC----CCCCEEE-EECCCC-----------CCCCC---CCHHHHHHHHHHHHHHHHHC T ss_conf 97999838978799999999978----9998799-856887-----------98898---99999999999999999974 Q ss_pred CCEEEEEEEEEEE---CCCHHHHCCCCCEEE-CCCCCCC Q ss_conf 4303643112220---572132106654231-3532233 Q gi|254780570|r 82 QPDLICLAGYMRL---LSRDFVESYKNKILN-IHPSLLP 116 (205) Q Consensus 82 ~~Dliv~~g~~~i---l~~~~l~~~~~~~iN-~HpslLP 116 (205) ++|++|.| .+-. .-+.+-+.|...+++ +.|+.-| T Consensus 62 ~~~~iViA-CNTaS~~al~~lr~~~~~PiiGvi~P~ik~ 99 (105) T d1b74a1 62 GVDIIVVA-CNTASAYALERLKKEINVPVFGVIEPGVKE 99 (105) T ss_dssp TCSEEEEC-CHHHHHHHHHHHHHHSSSCEEESHHHHHHH T ss_pred CCCEEEEE-CCCHHHHHHHHHHHHCCCCEEEEEHHHHHH T ss_conf 99989980-571789999999987899999932289999 No 25 >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} Probab=64.59 E-value=4.1 Score=18.27 Aligned_cols=35 Identities=23% Similarity=0.269 Sum_probs=19.0 Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE Q ss_conf 98665999976985018999999973999847999997 Q gi|254780570|r 1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS 38 (205) Q Consensus 1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis 38 (205) |..+||+|+. ++|.--.++++..... +++|.++.- T Consensus 1 m~~kkIlV~G-atG~iG~~v~~~Ll~~--g~~V~~~~R 35 (205) T d1hdoa_ 1 MAVKKIAIFG-ATGQTGLTTLAQAVQA--GYEVTVLVR 35 (205) T ss_dssp CCCCEEEEES-TTSHHHHHHHHHHHHT--TCEEEEEES T ss_pred CCCCEEEEEC-CCCHHHHHHHHHHHHC--CCEEEEEEC T ss_conf 9988899999-9878999999999978--698999983 No 26 >d1iowa1 c.30.1.2 (A:1-96) D-Ala-D-Ala ligase, N-domain {Escherichia coli, gene ddlB [TaxId: 562]} Probab=59.65 E-value=5 Score=17.68 Aligned_cols=26 Identities=8% Similarity=0.369 Sum_probs=15.8 Q ss_pred CCCEEEEEECCCCH-------HHHHHHHHHHCC Q ss_conf 86659999769850-------189999999739 Q gi|254780570|r 2 IRKNIVIFISGEGT-------NMLSLIQATKKN 27 (205) Q Consensus 2 ~k~riavl~SG~Gs-------nl~~Il~~~~~~ 27 (205) ||+||+||+-|..+ ..+++.++.+.. T Consensus 1 M~~kI~vl~GG~S~E~~iSl~Sa~~v~~~L~~~ 33 (96) T d1iowa1 1 MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREG 33 (96) T ss_dssp CCCEEEEECCCSSTTHHHHHHHHHHHHHHHHHT T ss_pred CCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHC T ss_conf 984599995757622476886699999999875 No 27 >d2at2a2 c.78.1.1 (A:145-295) Aspartate carbamoyltransferase catalytic subunit {Bacillus subtilis [TaxId: 1423]} Probab=58.82 E-value=4.6 Score=17.98 Aligned_cols=24 Identities=29% Similarity=0.508 Sum_probs=15.9 Q ss_pred CCCHHHHCCCCCEEECCCCCCCCCCC Q ss_conf 57213210665423135322333244 Q gi|254780570|r 95 LSRDFVESYKNKILNIHPSLLPLFPG 120 (205) Q Consensus 95 l~~~~l~~~~~~~iN~HpslLP~yrG 120 (205) +..+.+...+..++=+|| ||.+|| T Consensus 88 ~~~~~~~~~~~~~i~MH~--LP~~Rg 111 (151) T d2at2a2 88 LTVERAERMKRHAIIMHP--APVNRG 111 (151) T ss_pred CHHHHHHHCCCCEEEECC--CCCCCC T ss_conf 015665422667478247--762447 No 28 >d1pg5a2 c.78.1.1 (A:147-299) Aspartate carbamoyltransferase catalytic subunit {Archaeon Sulfolobus acidocaldarius [TaxId: 2285]} Probab=58.54 E-value=5.2 Score=17.56 Aligned_cols=98 Identities=13% Similarity=0.166 Sum_probs=47.4 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 66599997698-50189999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) .+||++.+-++ +..+.+++.+.. .++.++..+++..-...-.......+..+.... .+.+.++ T Consensus 3 gl~i~~vGD~~~sRv~~Sl~~~l~--~~g~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~------------d~~eai~-- 66 (153) T d1pg5a2 3 GLVFALLGDLKYARTVNSLLRILT--RFRPKLVYLISPQLLRARKEILDELNYPVKEVE------------NPFEVIN-- 66 (153) T ss_dssp TCEEEEEECCSSCHHHHHHHHHGG--GSCCSEEEEECCGGGCCCHHHHTTCCSCEEEES------------CGGGTGG-- T ss_pred CCEEEEECCCCCCHHHHHHHHHHH--HCCCEEEEEECCCCCCCCHHHCCCCCCEEEEEE------------CHHHHHH-- T ss_conf 999999887876589999999999--869915998256556642121024898289995------------8999963-- Q ss_pred CCEEEEEEEE----------------EEECCCHHHHCCCCCEEECCCCCCCCCCC Q ss_conf 4303643112----------------22057213210665423135322333244 Q gi|254780570|r 82 QPDLICLAGY----------------MRLLSRDFVESYKNKILNIHPSLLPLFPG 120 (205) Q Consensus 82 ~~Dliv~~g~----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG 120 (205) +.|+|..-.| ...++.++++..+..++=+|| || || T Consensus 67 ~aDvvy~~~~q~~~~~~~~~~~~~~~~y~v~~~~l~~~~~~~i~mH~--LP--R~ 117 (153) T d1pg5a2 67 EVDVLYVTRIQKERFVDEMEYEKIKGSYIVSLDLANKMKKDSIILHP--LP--RV 117 (153) T ss_dssp GCSEEEEECCCSTTSSCHHHHHHHGGGGSBCHHHHHTSCTTCEEECC--SC--CS T ss_pred CCCEEEEEEEEEHHCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEECC--CC--CC T ss_conf 59868874433101011157777777655568898601788079657--88--76 No 29 >d1jf8a_ c.44.1.1 (A:) Arsenate reductase ArsC {Staphylococcus aureus [TaxId: 1280]} Probab=56.46 E-value=5.5 Score=17.39 Aligned_cols=55 Identities=9% Similarity=0.136 Sum_probs=31.7 Q ss_pred CCEEEEEECCCC--H-HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE Q ss_conf 665999976985--0-189999999739998479999976888878889986089504 Q gi|254780570|r 3 RKNIVIFISGEG--T-NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF 57 (205) Q Consensus 3 k~riavl~SG~G--s-nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~ 57 (205) |+||.+.+.||- | -++++++....+.+.+.-+++-....+...++..++.||+.- T Consensus 2 k~~vlFvC~~N~cRS~mAEa~~~~~~~~~~~v~SAG~~~~~v~p~ai~~l~e~Gid~~ 59 (130) T d1jf8a_ 2 KKTIYFISTGNSARSQMAEGWGKEILGEGWNVYSAGIETHGVNPKAIEAMKEVDIDIS 59 (130) T ss_dssp CEEEEEEESSSSSHHHHHHHHHHHHSTTTEEEEEEESSCCCCCHHHHHHHHHTTCCCT T ss_pred CCEEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCCCCCCCCCHHHHHHHHCCCCCCC T ss_conf 9879999299817989999999960776605504342234540255677530132223 No 30 >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} Probab=56.35 E-value=5.7 Score=17.32 Aligned_cols=55 Identities=18% Similarity=0.308 Sum_probs=33.5 Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEE Q ss_conf 86659999769850189999999739998479999976888878889986089504630 Q gi|254780570|r 2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIP 60 (205) Q Consensus 2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~ 60 (205) |+.||+|= |.|+==+.++++....+ +.+++.|---.+ ......+.+++.+.+... T Consensus 1 M~irIaIN--GfGRIGR~v~Ral~~~~-dieiVaINd~~~-~~~~~~l~~~~~~~~~~~ 55 (172) T d2czca2 1 MKVKVGVN--GYGTIGKRVAYAVTKQD-DMELIGITKTKP-DFEAYRAKELGIPVYAAS 55 (172) T ss_dssp CCEEEEEE--CCSHHHHHHHHHHHTCT-TEEEEEEEESSC-SHHHHHHHHTTCCEEESS T ss_pred CCEEEEEE--CCCHHHHHHHHHHHHCC-CCEEEEEECCCC-HHHHHHHHHCCCEEECCC T ss_conf 95799998--98788999999997599-965999966997-589987541585022354 No 31 >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} Probab=54.39 E-value=6.1 Score=17.10 Aligned_cols=75 Identities=19% Similarity=0.152 Sum_probs=39.4 Q ss_pred CCEEEEEECCCCHHHH-HHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 6659999769850189-999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 3 RKNIVIFISGEGTNML-SLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 3 k~riavl~SG~Gsnl~-~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) +.|+++. |-|+-.. .++...+.- -.++++.|++.++ ...-+.++++|++...+. .+.+ +-+.+++- T Consensus 33 ~iriaiI--G~G~~~~~~~~~~~~~~-~~~~ivav~d~~~-~~a~~~~~~~~i~~~~~~--~~~d-------~~ell~~~ 99 (221) T d1h6da1 33 RFGYAIV--GLGKYALNQILPGFAGC-QHSRIEALVSGNA-EKAKIVAAEYGVDPRKIY--DYSN-------FDKIAKDP 99 (221) T ss_dssp CEEEEEE--CCSHHHHHTHHHHTTTC-SSEEEEEEECSCH-HHHHHHHHHTTCCGGGEE--CSSS-------GGGGGGCT T ss_pred CEEEEEE--CCCHHHHHHHHHHHHHC-CCCEEEEEECCCH-HHHHHHHHHHCCCCCCCC--CCCC-------HHHHCCCC T ss_conf 7789999--18399999999999738-9966999962888-999999986301324443--2275-------65521233 Q ss_pred CCEEEEEEE Q ss_conf 430364311 Q gi|254780570|r 82 QPDLICLAG 90 (205) Q Consensus 82 ~~Dliv~~g 90 (205) ++|+|+.+. T Consensus 100 ~iD~V~I~t 108 (221) T d1h6da1 100 KIDAVYIIL 108 (221) T ss_dssp TCCEEEECS T ss_pred CCEEEEECC T ss_conf 320133123 No 32 >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} Probab=52.94 E-value=6.4 Score=16.95 Aligned_cols=81 Identities=12% Similarity=0.183 Sum_probs=45.5 Q ss_pred CCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 86659999769850189999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 2 IRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 2 ~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) ..+|++|+ |.|.-.+.+.++...... . ...++||......+.+++++.... ++. ++.+.+. T Consensus 23 ~~~~ilvi--GaG~~g~~v~~~L~~~g~--~-~i~v~nRt~~ka~~l~~~~~~~~~--~~~----------~~~~~l~-- 83 (159) T d1gpja2 23 HDKTVLVV--GAGEMGKTVAKSLVDRGV--R-AVLVANRTYERAVELARDLGGEAV--RFD----------ELVDHLA-- 83 (159) T ss_dssp TTCEEEEE--SCCHHHHHHHHHHHHHCC--S-EEEEECSSHHHHHHHHHHHTCEEC--CGG----------GHHHHHH-- T ss_pred CCCEEEEE--CCCHHHHHHHHHHHHCCC--C-EEEEECCCHHHHHHHHHHHHCCCC--CCH----------HHHHHHC-- T ss_conf 16969998--798899999999996698--5-799975868899998886411434--514----------5787735-- Q ss_pred CCEEEEEEE--EEEECCCHHHH Q ss_conf 430364311--22205721321 Q gi|254780570|r 82 QPDLICLAG--YMRLLSRDFVE 101 (205) Q Consensus 82 ~~Dliv~~g--~~~il~~~~l~ 101 (205) +.|+|+++- -..++.++.++ T Consensus 84 ~~Divi~atss~~~ii~~~~i~ 105 (159) T d1gpja2 84 RSDVVVSATAAPHPVIHVDDVR 105 (159) T ss_dssp TCSEEEECCSSSSCCBCHHHHH T ss_pred CCCEEEEECCCCCCCCCHHHHH T ss_conf 4899999248987641276668 No 33 >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} Probab=52.75 E-value=6.5 Score=16.93 Aligned_cols=77 Identities=17% Similarity=0.137 Sum_probs=42.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH----HHHHCCCCEEEEECCCCCCCCCHHHHHHHHC Q ss_conf 665999976985018999999973999847999997688887888----9986089504630132332210124321000 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV----KARKEKVPTFPIPYKDYISRREHEKAILMQL 78 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~----~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l 78 (205) ..|+.=+++|.|+++..+.+. ..++.+| |- +...++ +++..+++...+...+... .- T Consensus 31 ~grvLDiGcG~G~~~~~la~~------g~~v~gv--D~-s~~~l~~a~~~~~~~~~~~~~~~~~d~~~----------~~ 91 (198) T d2i6ga1 31 PGRTLDLGCGNGRNSLYLAAN------GYDVTAW--DK-NPASMANLERIKAAEGLDNLQTDLVDLNT----------LT 91 (198) T ss_dssp SCEEEEETCTTSHHHHHHHHT------TCEEEEE--ES-CHHHHHHHHHHHHHTTCTTEEEEECCTTT----------CC T ss_pred CCCEEEECCCCCHHHHHHHHH------HHHHCCC--CC-CHHHHHHHHHHHHHCCCCCHHHHHEECCC----------CC T ss_conf 995999889997889998987------6654035--67-67889999997542233320022100014----------45 Q ss_pred CCCCCEEEEEEEEEEECCCH Q ss_conf 12343036431122205721 Q gi|254780570|r 79 SSIQPDLICLAGYMRLLSRD 98 (205) Q Consensus 79 ~~~~~Dliv~~g~~~il~~~ 98 (205) -....|+|++......+|++ T Consensus 92 ~~~~fD~I~~~~~~~~~~~~ 111 (198) T d2i6ga1 92 FDGEYDFILSTVVMMFLEAQ 111 (198) T ss_dssp CCCCEEEEEEESCGGGSCTT T ss_pred CCCCCCEEEEEEEEECCCHH T ss_conf 46654599982030108888 No 34 >d1qh8b_ c.92.2.3 (B:) Nitrogenase iron-molybdenum protein, beta chain {Klebsiella pneumoniae [TaxId: 573]} Probab=51.13 E-value=6.8 Score=16.76 Aligned_cols=52 Identities=23% Similarity=0.263 Sum_probs=21.3 Q ss_pred CCCHHHHHHHH-HHHCCCCCCEEEEEEECCC------CCHH-HHHHHH-----CCCCEEEEECCCCC Q ss_conf 98501899999-9973999847999997688------8878-889986-----08950463013233 Q gi|254780570|r 12 GEGTNMLSLIQ-ATKKNDYPAEIVGVFSDNS------NAQG-LVKARK-----EKVPTFPIPYKDYI 65 (205) Q Consensus 12 G~Gsnl~~Il~-~~~~~~~~~eI~~Visn~~------da~~-l~~a~~-----~~Ip~~~i~~~~~~ 65 (205) |...||..-|+ ..... +-++..|+|-.. |-.+ ...+++ .++|+..++...|. T Consensus 124 GG~~~L~~~i~~~~~~~--~P~~I~V~tTC~~eiIGDDl~~vi~~~~~~~~~~~~~pvi~v~tpgF~ 188 (519) T d1qh8b_ 124 GGNNNMNLGLQNASALY--KPEIIAVSTTCMAEVIGDDLQAFIANAKKDGFVDSSIAVPHAHTPSFI 188 (519) T ss_dssp CSHHHHHHHHHHHHHHH--CCSEEEEEECHHHHHHTCCHHHHHHHHHHTTSSCTTSBCCBCCCCTTS T ss_pred CCHHHHHHHHHHHHHHC--CCCEEEEECCCCHHHCCCCHHHHHHHHHHHCCCCCCCEEEEEECCCCC T ss_conf 84888999999999854--997899946777401777999999999873477789648998579863 No 35 >d4pfka_ c.89.1.1 (A:) ATP-dependent phosphofructokinase {Bacillus stearothermophilus [TaxId: 1422]} Probab=49.32 E-value=7.3 Score=16.57 Aligned_cols=100 Identities=15% Similarity=0.192 Sum_probs=43.2 Q ss_pred CEEEEEECCCCH-----HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHH--------------HHHCCCCEEEEECCCC Q ss_conf 659999769850-----189999999739998479999976888878889--------------9860895046301323 Q gi|254780570|r 4 KNIVIFISGEGT-----NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVK--------------ARKEKVPTFPIPYKDY 64 (205) Q Consensus 4 ~riavl~SG~Gs-----nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~--------------a~~~~Ip~~~i~~~~~ 64 (205) |||+|+.||+-+ .+..++++.... +.+|.++. ..-.|+-. ...-|-....-..+.+ T Consensus 2 krIaIl~sGG~~pgiNa~i~~~v~~~~~~--~~~v~g~~---~G~~Gl~~~~~~~l~~~~~~~~~~~gGt~lgs~r~~~~ 76 (319) T d4pfka_ 2 KRIGVLTSGGDSPGMNAAIRSVVRKAIYH--GVEVYGVY---HGYAGLIAGNIKKLEVGDVGDIIHRGGTILYTARCPEF 76 (319) T ss_dssp CEEEEEEESSCCTTHHHHHHHHHHHHHHT--TCEEEEES---SHHHHHHTTCEEEECGGGGTTCTTCCSCTTCCCCCTTS T ss_pred CEEEEECCCCCCHHHHHHHHHHHHHHHHC--CCEEEEEC---CCHHHHCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC T ss_conf 88999876887689999999999999877--99999983---16687567995159989998798648630035888865 Q ss_pred CCCCCHHHHHHHHCCCCCCEEEEEE-EEEEECCCHHHHCCCCCEEE Q ss_conf 3221012432100012343036431-12220572132106654231 Q gi|254780570|r 65 ISRREHEKAILMQLSSIQPDLICLA-GYMRLLSRDFVESYKNKILN 109 (205) Q Consensus 65 ~~~~~~~~~l~~~l~~~~~Dliv~~-g~~~il~~~~l~~~~~~~iN 109 (205) .+ ++.-+++.+.+++++.|.++.. |-...=....+..+...++. T Consensus 77 ~~-~~~~~~~~~~l~~~~I~~li~iGG~~s~~~a~~L~~~~~~vvg 121 (319) T d4pfka_ 77 KT-EEGQKKGIEQLKKHGIQGLVVIGGDGSYQGAKKLTEHGFPCVG 121 (319) T ss_dssp SS-HHHHHHHHHHHHHHTCCEEEEEECHHHHHHHHHHHHTTCCEEE T ss_pred CC-CCHHHHHHHHHHHHCCCEEEEECCCHHHHHHHHHHHCCCCEEE T ss_conf 54-1004469999998336638995383689999998733675552 No 36 >d1qfja2 c.25.1.1 (A:98-232) NAD(P)H:flavin oxidoreductase {Escherichia coli [TaxId: 562]} Probab=48.27 E-value=7.6 Score=16.46 Aligned_cols=39 Identities=10% Similarity=0.258 Sum_probs=27.8 Q ss_pred CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 665999976985-018999999973999847999997688 Q gi|254780570|r 3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) .+.++.+++|.| +-+.++++...+...+.+|.++.+++. T Consensus 5 ~rplv~IagGtGiaP~~s~l~~~~~~~~~~~v~l~~~~r~ 44 (135) T d1qfja2 5 ERPMILIAGGTGFSYARSILLTALARNPNRDITIYWGGRE 44 (135) T ss_dssp SSCEEEEEETTCHHHHHHHHHHHHHHCTTCCEEEEEEESS T ss_pred CCCEEEEECCEEHHHHHHHHHHHHHCCCCCCEEEEEECCC T ss_conf 9989999886259999999999997064565368971166 No 37 >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} Probab=48.15 E-value=7.6 Score=16.45 Aligned_cols=47 Identities=13% Similarity=0.208 Sum_probs=26.1 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC Q ss_conf 6659999769850189999999739998479999976888878889986089 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV 54 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I 54 (205) .+|++|| |.|...++++.+..+.... +| .+.||....+...++..+. T Consensus 17 ~~~vlIl--GaGGaarai~~aL~~~g~~-~I--~I~nR~~~ka~~L~~~~~~ 63 (167) T d1npya1 17 NAKVIVH--GSGGMAKAVVAAFKNSGFE-KL--KIYARNVKTGQYLAALYGY 63 (167) T ss_dssp TSCEEEE--CSSTTHHHHHHHHHHTTCC-CE--EEECSCHHHHHHHHHHHTC T ss_pred CCEEEEE--CCCHHHHHHHHHHHHCCCC-EE--EEECCCHHHHHHHHHHHHH T ss_conf 9969998--9878999999999977998-89--9963327888878876432 No 38 >d1ybha3 c.36.1.9 (A:460-667) Acetohydroxyacid synthase catalytic subunit {Thale cress (Arabidopsis thaliana), chloroplast [TaxId: 3702]} Probab=47.95 E-value=7.5 Score=16.48 Aligned_cols=12 Identities=25% Similarity=0.255 Sum_probs=6.1 Q ss_pred CCCCCHHCCCCC Q ss_conf 212100002465 Q gi|254780570|r 122 HTHRRVLQSGIK 133 (205) Q Consensus 122 ~~~~~ai~~g~~ 133 (205) .++..++.+||. T Consensus 196 ~~~~~m~~~~d~ 207 (208) T d1ybha3 196 GTFNDVITEGDG 207 (208) T ss_dssp CCGGGCBCSCCC T ss_pred CCHHHHHHCCCC T ss_conf 899999535589 No 39 >d3ck2a1 d.159.1.7 (A:1-173) Uncharacterized protein SP1879 {Streptococcus pneumoniae [TaxId: 1313]} Probab=47.42 E-value=7.3 Score=16.58 Aligned_cols=25 Identities=12% Similarity=0.260 Sum_probs=16.3 Q ss_pred CCCCEEEEEEC--CCCHHHHHHHHHHH Q ss_conf 98665999976--98501899999997 Q gi|254780570|r 1 MIRKNIVIFIS--GEGTNMLSLIQATK 25 (205) Q Consensus 1 M~k~riavl~S--G~Gsnl~~Il~~~~ 25 (205) |.++||+|+.- |+-..|+++++... T Consensus 1 m~~~kI~viSD~Hgn~~al~~vl~~~~ 27 (173) T d3ck2a1 1 MAKQTIIVMSDSHGDSLIVEEVRDRYV 27 (173) T ss_dssp CCCEEEEEECCCTTCHHHHHHHHHHHT T ss_pred CCCCEEEEEECCCCCHHHHHHHHHHHH T ss_conf 998899999636899799999999865 No 40 >d2dt5a2 c.2.1.12 (A:78-203) Transcriptional repressor Rex, C-terminal domain {Thermus aquaticus [TaxId: 271]} Probab=46.58 E-value=6.2 Score=17.04 Aligned_cols=49 Identities=16% Similarity=0.060 Sum_probs=32.4 Q ss_pred CEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE Q ss_conf 6599997698501899999997399984799999768888788899860895046 Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP 58 (205) Q Consensus 4 ~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~ 58 (205) .|+++. |.|+.-.+|+.+.... ..+++++.+-++|...|. .-+|+|++. T Consensus 4 ~~v~I~--GaG~~G~~l~~~l~~~-~~~~iv~fiDdd~~k~G~---~I~Gi~V~~ 52 (126) T d2dt5a2 4 WGLCIV--GMGRLGSALADYPGFG-ESFELRGFFDVDPEKVGR---PVRGGVIEH 52 (126) T ss_dssp EEEEEE--CCSHHHHHHHHCSCCC-SSEEEEEEEESCTTTTTC---EETTEEEEE T ss_pred CEEEEE--CCCHHHHHHHHHHHHC-CCCEEEEEEECCHHHCCC---EECCEEEEC T ss_conf 629999--6899999999727546-995799999086575497---989999914 No 41 >d2hzba1 c.143.1.1 (A:2-312) Hypothetical protein BH3568 {Bacillus halodurans [TaxId: 86665]} Probab=45.93 E-value=8.2 Score=16.22 Aligned_cols=32 Identities=34% Similarity=0.774 Sum_probs=23.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE Q ss_conf 665999976985018999999973999847999997 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS 38 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis 38 (205) |++|++| |+||.+..+++..+. .+.+++.|++ T Consensus 2 ~~~Iv~l--~GGtG~~~ll~gl~~--~~~~lt~IVn 33 (311) T d2hzba1 2 KKNVVVF--GGGTGLSVLLRGLKT--FPVSITAIVT 33 (311) T ss_dssp CEEEEEE--CCHHHHHHHHHHHTT--SSEEEEEEEC T ss_pred CCCEEEE--CCCCCHHHHHHHHHH--CCCCEEEEEE T ss_conf 8768998--785248999999974--7998599997 No 42 >d1ltqa1 c.108.1.9 (A:153-301) Polynucleotide kinase, phosphatase domain {Bacteriophage T4 [TaxId: 10665]} Probab=45.79 E-value=8.2 Score=16.21 Aligned_cols=22 Identities=18% Similarity=0.066 Sum_probs=10.2 Q ss_pred HHHHHHHHCCCCCCEEEEEEECCCC Q ss_conf 9999999739998479999976888 Q gi|254780570|r 18 LSLIQATKKNDYPAEIVGVFSDNSN 42 (205) Q Consensus 18 ~~Il~~~~~~~~~~eI~~Visn~~d 42 (205) ..+++..++. +++| .++||++. T Consensus 42 ~~~l~~l~~~--G~~I-ii~T~R~~ 63 (149) T d1ltqa1 42 VELSKMYALM--GYQI-VVVSGRES 63 (149) T ss_dssp HHHHHHHHHT--TCEE-EEEECSCC T ss_pred HHHHHHHHHC--CCEE-EEEECCCH T ss_conf 9999999844--4808-99926857 No 43 >d3euga_ c.18.1.1 (A:) Uracil-DNA glycosylase {Escherichia coli [TaxId: 562]} Probab=45.17 E-value=3.4 Score=18.82 Aligned_cols=53 Identities=13% Similarity=0.298 Sum_probs=30.2 Q ss_pred CCHHHHHHHHCCCCCCEEEEEEEEEEEC--CCHHHHCCCCCEE-ECCCCCCCCCCCC Q ss_conf 1012432100012343036431122205--7213210665423-1353223332444 Q gi|254780570|r 68 REHEKAILMQLSSIQPDLICLAGYMRLL--SRDFVESYKNKIL-NIHPSLLPLFPGL 121 (205) Q Consensus 68 ~~~~~~l~~~l~~~~~Dliv~~g~~~il--~~~~l~~~~~~~i-N~HpslLP~yrG~ 121 (205) +.|.+.+++.|.+.+..+|.+. |+.-- -..+++.-+.-+| --|||.|-.|||. T Consensus 138 e~ft~~ii~~l~~~~~~vvfiL-wG~~A~~~~~~i~~~~h~il~s~HPSPlsa~rgF 193 (225) T d3euga_ 138 ETFTDKVISLINQHREGVVFLL-WGSHAQKKGAIIDKQRHHVLKAPHPSPLSAHRGF 193 (225) T ss_dssp HHHHHHHHHHHHHHCSSCEEEE-ESHHHHHHTTTSCTTTSEEEEECCSSTTTGGGTT T ss_pred HHHHHHHHHHHHCCCCCEEEEE-EEEHHHHHHHHHCCCCCEEEEECCCCHHHCCCCC T ss_conf 9999999999973677859998-6130667776515678769982799822148998 No 44 >d1vl2a1 c.26.2.1 (A:2-169) Argininosuccinate synthetase, N-terminal domain {Thermotoga maritima [TaxId: 2336]} Probab=44.04 E-value=8.7 Score=16.03 Aligned_cols=32 Identities=16% Similarity=0.328 Sum_probs=21.9 Q ss_pred CCEEEEEECCC-CH-HHHHHHHHHHCCCCCCEEEEEEEC Q ss_conf 66599997698-50-189999999739998479999976 Q gi|254780570|r 3 RKNIVIFISGE-GT-NMLSLIQATKKNDYPAEIVGVFSD 39 (205) Q Consensus 3 k~riavl~SG~-Gs-nl~~Il~~~~~~~~~~eI~~Visn 39 (205) |+||+|-+||+ .| .|..++.. ...++.++..+ T Consensus 1 K~KIvvalSGGvDS~vl~~lL~~-----~~~~v~a~~~~ 34 (168) T d1vl2a1 1 KEKVVLAYSGGLDTSVILKWLCE-----KGFDVIAYVAN 34 (168) T ss_dssp CCEEEEECCSSHHHHHHHHHHHH-----TTCEEEEEEEE T ss_pred CCEEEEEECCHHHHHHHHHHHHH-----CCCEEEEEECC T ss_conf 98899996268889999999998-----69969999802 No 45 >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} Probab=43.73 E-value=8.8 Score=16.00 Aligned_cols=51 Identities=14% Similarity=0.104 Sum_probs=29.2 Q ss_pred CCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE Q ss_conf 665999976985018-9999999739998479999976888878889986089504 Q gi|254780570|r 3 RKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF 57 (205) Q Consensus 3 k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~ 57 (205) |.|++|.+ .|+-. ...+.+.+.. -+++++.|++.++ ....+.+++++++++ T Consensus 1 Kiri~iIG--~G~~g~~~~~~~l~~~-~~~~i~~v~d~~~-~~~~~~~~~~~~~~~ 52 (164) T d1tlta1 1 KLRIGVVG--LGGIAQKAWLPVLAAA-SDWTLQGAWSPTR-AKALPICESWRIPYA 52 (164) T ss_dssp CEEEEEEC--CSTHHHHTHHHHHHSC-SSEEEEEEECSSC-TTHHHHHHHHTCCBC T ss_pred CCEEEEEC--CCHHHHHHHHHHHHHC-CCCEEEEEEECHH-HHHHHHHHCCCCCCC T ss_conf 97999995--9899999999999858-9968999993306-766665420233435 No 46 >d2yvta1 d.159.1.6 (A:4-260) Uncharacterized protein Aq_1956 {Aquifex aeolicus [TaxId: 63363]} Probab=43.16 E-value=6.9 Score=16.72 Aligned_cols=34 Identities=9% Similarity=0.095 Sum_probs=20.6 Q ss_pred CCCEEEEEEC--CCCHHHHHHHHHHHCCCCCCEEEEEE Q ss_conf 8665999976--98501899999997399984799999 Q gi|254780570|r 2 IRKNIVIFIS--GEGTNMLSLIQATKKNDYPAEIVGVF 37 (205) Q Consensus 2 ~k~riavl~S--G~Gsnl~~Il~~~~~~~~~~eI~~Vi 37 (205) |++||+++.- ++=..++.|++...+.+. +.+++. T Consensus 1 ~~~ri~~isD~h~~~~~l~~l~~~~~~~~~--D~vli~ 36 (257) T d2yvta1 1 MPRKVLAIKNFKERFDLLPKLKGVIAEKQP--DILVVV 36 (257) T ss_dssp CCCEEEEEECCTTCGGGHHHHHHHHHHHCC--SEEEEE T ss_pred CCCEEEEEECCCCCHHHHHHHHHHHHHCCC--CEEEEE T ss_conf 984899994899997899999998856599--999991 No 47 >d1krha2 c.25.1.2 (A:206-338) Benzoate dioxygenase reductase {Acinetobacter sp. [TaxId: 472]} Probab=42.60 E-value=9.2 Score=15.88 Aligned_cols=40 Identities=18% Similarity=0.406 Sum_probs=27.1 Q ss_pred CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCCC Q ss_conf 665999976985-0189999999739998479999976888 Q gi|254780570|r 3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNSN 42 (205) Q Consensus 3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~d 42 (205) ++.++.++.|.| +-+.++++...+.....+|.++.+++.. T Consensus 5 ~rplv~IAgG~GItP~~s~l~~~~~~~~~~~i~l~~~~r~~ 45 (133) T d1krha2 5 KRPVLMLAGGTGIAPFLSMLQVLEQKGSEHPVRLVFGVTQD 45 (133) T ss_dssp SSCEEEEEEGGGHHHHHHHHHHHHHHCCSSCEEEEEEESSG T ss_pred CCCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEEECCH T ss_conf 99799999458299999999999984999966899862106 No 48 >d1tzya_ a.22.1.1 (A:) Histone H2A {Chicken (Gallus gallus), erythrocytes [TaxId: 9031]} Probab=42.38 E-value=3.3 Score=18.97 Aligned_cols=12 Identities=42% Similarity=0.573 Sum_probs=9.9 Q ss_pred CEEECCCCCCCC Q ss_conf 423135322333 Q gi|254780570|r 106 KILNIHPSLLPL 117 (205) Q Consensus 106 ~~iN~HpslLP~ 117 (205) -+=|+||+|||+ T Consensus 95 v~P~Ih~~Llpk 106 (106) T d1tzya_ 95 VLPNIQAVLLPK 106 (106) T ss_dssp CCCCCCGGGSCC T ss_pred CCCCCCHHHCCC T ss_conf 267517865698 No 49 >d1fdra2 c.25.1.1 (A:101-248) Ferredoxin reductase (flavodoxin reductase) {Escherichia coli [TaxId: 562]} Probab=42.19 E-value=9.3 Score=15.84 Aligned_cols=38 Identities=18% Similarity=0.243 Sum_probs=28.2 Q ss_pred CEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 65999976985-018999999973999847999997688 Q gi|254780570|r 4 KNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 4 ~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) ++++.++.|.| +-+.++++.....+....+.++.+.+. T Consensus 7 k~lvlIa~GtGiaP~~s~l~~~~~~~~~~~v~l~~g~r~ 45 (148) T d1fdra2 7 ETLWMLATGTAIGPYLSILRLGKDLDRFKNLVLVHAARY 45 (148) T ss_dssp SEEEEEEEGGGGHHHHHHHHHCCSCTTCSEEEEEEEESS T ss_pred CEEEEEECCEEHHHHHHHHHHHHHHCCCCCEEEEEECCC T ss_conf 879999767579999999999998379975899994186 No 50 >d1jyka_ c.68.1.13 (A:) CTP:phosphocholine cytidylytransferase LicC {Streptococcus pneumoniae [TaxId: 1313]} Probab=42.15 E-value=9.3 Score=15.84 Aligned_cols=84 Identities=15% Similarity=0.082 Sum_probs=42.9 Q ss_pred CCCEEEEEECCCCHHH--------------------HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEEC Q ss_conf 8665999976985018--------------------99999997399984799999768888788899860895046301 Q gi|254780570|r 2 IRKNIVIFISGEGTNM--------------------LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPY 61 (205) Q Consensus 2 ~k~riavl~SG~Gsnl--------------------~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~ 61 (205) ||+|.+||+.|.||=| +.+++......++ +|. |+++......-...+++++.....+. T Consensus 2 m~mkaiIlaaG~GtRl~p~t~~~pK~ll~i~gkpli~~~i~~l~~~g~~-~i~-iv~g~~~e~i~~~~~~~~i~i~~~~~ 79 (229) T d1jyka_ 2 IRVKAIILAAGLGTRLRPLTENTPKALVQVNQKPLIEYQIEFLKEKGIN-DII-IIVGYLKEQFDYLKEKYGVRLVFNDK 79 (229) T ss_dssp CCCEEEEEECSCCGGGTTTTSSSCGGGCEETTEEHHHHHHHHHHHTTCC-CEE-EEECTTGGGGTHHHHHHCCEEEECTT T ss_pred CCEEEEEECCCCCCCCCCCCCCCCCCEEEECCEEHHHHHHHHHHHHCCC-CCC-CCCCCCHHHHHHHHHHCCCCCCCCCC T ss_conf 8424999899775347830059984120799878999999999872876-543-41354411344542201213222222 Q ss_pred CCCCCCCCHHHHHHHHCCCCCCEEEEEEE Q ss_conf 32332210124321000123430364311 Q gi|254780570|r 62 KDYISRREHEKAILMQLSSIQPDLICLAG 90 (205) Q Consensus 62 ~~~~~~~~~~~~l~~~l~~~~~Dliv~~g 90 (205) .... ..-..+....+..+-+++++++ T Consensus 80 ~~~~---Gt~~sl~~a~~~l~~~~ii~~d 105 (229) T d1jyka_ 80 YADY---NNFYSLYLVKEELANSYVIDAD 105 (229) T ss_dssp TTTS---CTHHHHHTTGGGCTTEEEEETT T ss_pred CCCC---CCCCCCCCCHHHHCCCCCCCCC T ss_conf 1123---3333321101221212013235 No 51 >d2j8xa1 c.18.1.1 (A:26-255) Uracil-DNA glycosylase {Epstein-Barr virus [TaxId: 10376]} Probab=40.95 E-value=6.6 Score=16.89 Aligned_cols=92 Identities=13% Similarity=0.066 Sum_probs=43.4 Q ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE----EEECCCCCCC-----CCHHHHHHHHCCCCCCEEE Q ss_conf 189999999739998479999976888878889986089504----6301323322-----1012432100012343036 Q gi|254780570|r 16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF----PIPYKDYISR-----REHEKAILMQLSSIQPDLI 86 (205) Q Consensus 16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~----~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli 86 (205) .|++|++.....-... ..+..+.++.-.+.||=.. ++......+. +.|.+.+++.|.+.+..+| T Consensus 89 SL~NI~kel~~d~~~~-------~~~~~g~L~~Wa~QGVLLLN~~LTv~~g~~~SH~~~gWe~ft~~~i~~l~~~~~~vV 161 (230) T d2j8xa1 89 SLRNIYAELHRSLPEF-------SPPDHGCLDAWASQGVLLLNTILTVQKGKPGSHADIGWAWFTDHVISLLSERLKACV 161 (230) T ss_dssp HHHHHHHHHHHHCTTC-------CCCSSCCCHHHHTTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCSSCE T ss_pred CHHHHHHHHHHHCCCC-------CCCCCCCHHHHHHCCEEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCEE T ss_conf 2999999998645788-------877789868996388776630367747999983334748899999999972778879 Q ss_pred EEEEEEE---ECCCHHHHCCCCCEE-ECCCCCCC Q ss_conf 4311222---057213210665423-13532233 Q gi|254780570|r 87 CLAGYMR---LLSRDFVESYKNKIL-NIHPSLLP 116 (205) Q Consensus 87 v~~g~~~---il~~~~l~~~~~~~i-N~HpslLP 116 (205) ++. |+. .+ ..+++.-+..++ --|||.|- T Consensus 162 fiL-WG~~A~~~-~~~i~~~~h~Il~s~HPSPls 193 (230) T d2j8xa1 162 FML-WGAKAGDK-ASLINSKKHLVLTSQHPSPLA 193 (230) T ss_dssp EEE-ESHHHHGG-GGGSCTTTSEEEEECCSSGGG T ss_pred EEE-ECCHHHHH-HHHCCCCCCEEEECCCCCCCC T ss_conf 984-01446666-653157787699678999422 No 52 >d1ehia1 c.30.1.2 (A:3-134) D-alanine:D-lactate ligase VanA, N-domain {Leuconostoc mesenteroides, Ddl2 [TaxId: 1245]} Probab=40.90 E-value=9.7 Score=15.71 Aligned_cols=39 Identities=13% Similarity=0.267 Sum_probs=25.7 Q ss_pred CCEEEEEECCCCH-------HHHHHHHHHHCCCCCCEEEEEEECCCC Q ss_conf 6659999769850-------189999999739998479999976888 Q gi|254780570|r 3 RKNIVIFISGEGT-------NMLSLIQATKKNDYPAEIVGVFSDNSN 42 (205) Q Consensus 3 k~riavl~SG~Gs-------nl~~Il~~~~~~~~~~eI~~Visn~~d 42 (205) ||||+|++-|..+ .+++++++..... ++++..+..++.. T Consensus 1 Kk~Iavl~GG~S~EheVSl~Sa~~v~~~L~~~~-~y~v~~i~i~k~g 46 (132) T d1ehia1 1 KKRVALIFGGNSSEHDVSKRSAQNFYNAIEATG-KYEIIVFAIAQNG 46 (132) T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHHHHHS-SEEEEEEEECTTS T ss_pred CCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCC-CEEEEEEEECCCC T ss_conf 978999868685004889997999998651338-6268999775775 No 53 >d1m1na_ c.92.2.3 (A:) Nitrogenase iron-molybdenum protein, alpha chain {Azotobacter vinelandii [TaxId: 354]} Probab=38.75 E-value=10 Score=15.49 Aligned_cols=54 Identities=13% Similarity=0.165 Sum_probs=27.3 Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEECCC------CCHHH-H-HHHHCCCCEEEEECCCCC Q ss_conf 985018999999973999847999997688------88788-8-998608950463013233 Q gi|254780570|r 12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNS------NAQGL-V-KARKEKVPTFPIPYKDYI 65 (205) Q Consensus 12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~------da~~l-~-~a~~~~Ip~~~i~~~~~~ 65 (205) |...+|+..++.....-.+.+...|+|..+ |-.++ + ..++.++|...++-..|. T Consensus 123 GG~~kL~~~I~ei~~~~~~pk~I~V~sTC~~~lIGDDi~~v~~~~~~~~~~~Vi~v~t~Gf~ 184 (477) T d1m1na_ 123 GGDKKLAKLIDEVETLFPLNKGISVQSECPIGLIGDDIESVSKVKGAELSKTIVPVRCEGFR 184 (477) T ss_dssp CSHHHHHHHHHHHHHHCTTCCCEEEEECTHHHHHTCCHHHHHHHHHHHHTCCEEEECCCTTS T ss_pred CCHHHHHHHHHHHHHHCCCCCEEEEECCCHHHHHHHCHHHHHHHHHHHHCCCEEEEECCCCC T ss_conf 84888999999999848998789997886799986389999999888738947999668756 No 54 >d1vlva2 c.78.1.1 (A:153-313) Ornithine transcarbamoylase {Thermotoga maritima [TaxId: 2336]} Probab=38.53 E-value=11 Score=15.47 Aligned_cols=31 Identities=19% Similarity=0.153 Sum_probs=17.8 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEE Q ss_conf 665999976985018999999973999847999 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVG 35 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~ 35 (205) .+||++++-+...-+.+++.+... +++++.+ T Consensus 3 g~ki~~vGD~~nnV~~Sli~~~~~--~g~~i~~ 33 (161) T d1vlva2 3 GVKVVFMGDTRNNVATSLMIACAK--MGMNFVA 33 (161) T ss_dssp TCEEEEESCTTSHHHHHHHHHHHH--TTCEEEE T ss_pred CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEE T ss_conf 999999927856899999999998--5997999 No 55 >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} Probab=37.72 E-value=11 Score=15.38 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=13.5 Q ss_pred CEEEEEECCC-CHHHHHHHH Q ss_conf 6599997698-501899999 Q gi|254780570|r 4 KNIVIFISGE-GTNMLSLIQ 22 (205) Q Consensus 4 ~riavl~SG~-Gsnl~~Il~ 22 (205) +||+|+++|. ||.+-..+- T Consensus 1 MkI~ViGaG~~GtalA~~la 20 (180) T d1txga2 1 MIVSILGAGAMGSALSVPLV 20 (180) T ss_dssp CEEEEESCCHHHHHHHHHHH T ss_pred CEEEEECCCHHHHHHHHHHH T ss_conf 98999997999999999999 No 56 >d1u35c1 a.22.1.1 (C:814-919) macro-H2A.1, histone domain {Human (Homo sapiens) [TaxId: 9606]} Probab=37.49 E-value=4.3 Score=18.13 Aligned_cols=12 Identities=50% Similarity=0.739 Sum_probs=9.9 Q ss_pred CEEECCCCCCCC Q ss_conf 423135322333 Q gi|254780570|r 106 KILNIHPSLLPL 117 (205) Q Consensus 106 ~~iN~HpslLP~ 117 (205) -+=|+||+|||+ T Consensus 94 v~p~Ih~~Ll~k 105 (106) T d1u35c1 94 VLPNIHPELLAK 105 (106) T ss_dssp CCCCCCGGGSCC T ss_pred CCCCCCHHHCCC T ss_conf 257738876389 No 57 >d1e9yb2 c.1.9.2 (B:132-431,B:481-569) alpha-subunit of urease, catalytic domain {Helicobacter pylori [TaxId: 210]} Probab=36.95 E-value=11 Score=15.30 Aligned_cols=89 Identities=19% Similarity=0.209 Sum_probs=56.2 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH Q ss_conf 66599997698501899999997399984799999768888--------7888998608950463013233221012432 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI 74 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l 74 (205) ..++++|+-|++|.-.+|.+....|-+..++ ++|- ..|.-|.++.+++... .|..+...|-+.. T Consensus 59 P~N~g~~gkGn~s~~~~l~eqi~aGa~GlKi------HEDwGatp~~Id~~L~vad~~dvqv~iH--tDtlNE~Gfve~T 130 (389) T d1e9yb2 59 SMNLGFLAKGNASNDASLADQIEAGAIGFKI------HEDWGTTPSAINHALDVADKYDVQVAIH--TDTLNEAGCVEDT 130 (389) T ss_dssp SSEEEEEEECCCSCHHHHHHHHHTTCSEEEE------CGGGCCCHHHHHHHHHHHHHTTCEEEEC--CCTTCSSCCHHHH T ss_pred CCCEEEEECCCCCCHHHHHHHHHHCCCEEEC------CCCCCCCHHHHHHHHHHHHHHCCEEEEC--CCCCCCCCCHHHH T ss_conf 7253662116779837899999723032202------3102678788889999877509538943--8976654303648 Q ss_pred HHHCC--------------CCCCEEEEEEEEEEECCCHH Q ss_conf 10001--------------23430364311222057213 Q gi|254780570|r 75 LMQLS--------------SIQPDLICLAGYMRLLSRDF 99 (205) Q Consensus 75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~ 99 (205) +..+. .+.||++.++|+.-+||.+- T Consensus 131 ~~a~~gRtiH~~HtEGaGGGHAPDii~~~~~~nvLpsST 169 (389) T d1e9yb2 131 MAAIAGRTMHTFHTEGAGGGHAPDIIKVAGEHNILPAST 169 (389) T ss_dssp HHHHTTCCEEETTTTSTTSCSTTTGGGGGGSTTEEEEEC T ss_pred HHHHCCCCCEEEECCCCCCCCCCHHHHHCCCCCCCCCCC T ss_conf 998679752003137777777617888705777667889 No 58 >d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]} Probab=36.26 E-value=11 Score=15.23 Aligned_cols=74 Identities=9% Similarity=0.014 Sum_probs=36.9 Q ss_pred CEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 659999769850--189999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 4 KNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 4 ~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) .|+++.+-|..+ -...-+.+..+..-.+++++|.+ +.....-+.+++++++.... +. .+ .+.+.+. T Consensus 17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d-~~~~~~~~~~~~~~~~~~~~----~~---~~----~~l~~~~ 84 (237) T d2nvwa1 17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYN-PTLKSSLQTIEQLQLKHATG----FD---SL----ESFAQYK 84 (237) T ss_dssp EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEEC-SCHHHHHHHHHHTTCTTCEE----ES---CH----HHHHHCT T ss_pred EEEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEEEEC-CCHHHHHHHHHHCCCCCCEE----EC---CH----HHCCCCC T ss_conf 0899996686340899999999984699859999991-99999999998603665236----43---52----2301112 Q ss_pred CCEEEEEE Q ss_conf 43036431 Q gi|254780570|r 82 QPDLICLA 89 (205) Q Consensus 82 ~~Dliv~~ 89 (205) ++|+|+.+ T Consensus 85 ~iD~V~i~ 92 (237) T d2nvwa1 85 DIDMIVVS 92 (237) T ss_dssp TCSEEEEC T ss_pred CCCEEECC T ss_conf 21011025 No 59 >d1u6ka1 c.127.1.1 (A:2-283) F420-dependent methylenetetrahydromethanopterin dehydrogenase (MTD) {Archaeon Methanopyrus kandleri [TaxId: 2320]} Probab=36.21 E-value=3.2 Score=19.03 Aligned_cols=52 Identities=17% Similarity=0.119 Sum_probs=30.2 Q ss_pred CCCEEEEEEECCCCCHHHHHHH----HCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEEE Q ss_conf 9847999997688887888998----6089504630132332210124321000123430364 Q gi|254780570|r 29 YPAEIVGVFSDNSNAQGLVKAR----KEKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLIC 87 (205) Q Consensus 29 ~~~eI~~Visn~~da~~l~~a~----~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dliv 87 (205) ++-+.+.++|-|+-++|=..|+ ..|||+.++.-... +.. .+.+++....+|+ T Consensus 62 ~~pDf~i~isPN~a~PGP~~ARE~l~~~giP~ivI~D~p~--~k~-----~d~~~~~gfGYIi 117 (282) T d1u6ka1 62 FEPDFIVYGGPNPAAPGPSKAREMLADSEYPAVIIGDAPG--LKV-----KDEMEEQGLGYIL 117 (282) T ss_dssp HCCSEEEEECSCTTSHHHHHHHHHHHTSSSCEEEEEEGGG--GGG-----HHHHHHTTCEEEE T ss_pred CCCCEEEEECCCCCCCCCHHHHHHHHHCCCCEEEECCCCC--HHH-----HHHHHHCCCCEEE T ss_conf 1999899978988899957799999756998799758852--546-----8999865885799 No 60 >d1umka2 c.25.1.1 (A:154-300) cytochrome b5 reductase {Human (Homo sapiens) [TaxId: 9606]} Probab=34.61 E-value=12 Score=15.05 Aligned_cols=39 Identities=28% Similarity=0.433 Sum_probs=27.9 Q ss_pred CEEEEEECCCC-HHHHHHHHHHHCC-CCCCEEEEEEECCCC Q ss_conf 65999976985-0189999999739-998479999976888 Q gi|254780570|r 4 KNIVIFISGEG-TNMLSLIQATKKN-DYPAEIVGVFSDNSN 42 (205) Q Consensus 4 ~riavl~SG~G-snl~~Il~~~~~~-~~~~eI~~Visn~~d 42 (205) |+|++++.|.| +-+.+++++..+. ...-.+.++.+++.. T Consensus 19 k~i~lIagGtGItP~~s~l~~~l~~~~~~~~i~L~~~~r~~ 59 (147) T d1umka2 19 KSVGMIAGGTGITPMLQVIRAIMKDPDDHTVCHLLFANQTE 59 (147) T ss_dssp SEEEEEEEGGGHHHHHHHHHHHHTCTTCCCEEEEEEEESSG T ss_pred CEEEEEECCEECCHHHHHHHHHHHCCCCCCEEEEEEEECCC T ss_conf 76999978853165899999999668998559999983765 No 61 >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} Probab=34.35 E-value=12 Score=15.03 Aligned_cols=46 Identities=15% Similarity=0.208 Sum_probs=24.4 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE Q ss_conf 66599997698-5018999999973999847999997688887888998608950 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT 56 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~ 56 (205) .||++|+..|+ |+.+-..+.. . .++|.++ ++. ..-.+..++.+... T Consensus 1 sk~iaIiGaG~~G~~~A~~l~~--~---G~~V~~~--~r~-~~~~~~~~~~~~~~ 47 (184) T d1bg6a2 1 SKTYAVLGLGNGGHAFAAYLAL--K---GQSVLAW--DID-AQRIKEIQDRGAII 47 (184) T ss_dssp CCEEEEECCSHHHHHHHHHHHH--T---TCEEEEE--CSC-HHHHHHHHHHTSEE T ss_pred CCEEEEECCCHHHHHHHHHHHH--C---CCEEEEE--ECC-HHHHHHHHHCCCCC T ss_conf 9989998966999999999998--8---9979999--899-99999999769985 No 62 >d1ekxa2 c.78.1.1 (A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} Probab=34.06 E-value=12 Score=15.00 Aligned_cols=110 Identities=14% Similarity=0.116 Sum_probs=53.5 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEEC---CCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHC Q ss_conf 66599997698-50189999999739998479999976---888878889986089504630132332210124321000 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSD---NSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQL 78 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn---~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l 78 (205) +.+|++.+-++ +..+.+++.... .++.....+++- .++....+.++..+......+.- .+.+ T Consensus 4 gl~i~~vGD~~nsrv~~Sli~~l~--~~~~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d~------------~~a~ 69 (160) T d1ekxa2 4 NLHVAMVGDLKYGRTVHSLTQALA--KFDGNRFYFIAPDALAMPQYILDMLDEKGIAWSLHSSI------------EEVM 69 (160) T ss_dssp SCEEEEESCTTTCHHHHHHHHHHT--TSSSCEEEEECCGGGCCCHHHHHHHHHTTCCEEECSCS------------TTTG T ss_pred CCEEEEECCCCCCHHHHHHHHHHH--HCCCCEEEEECCCHHHHHHHHHHHHHHHCCCCCCCCCH------------HHHH T ss_conf 999999867886689999999999--82997288606401214689999986520456311699------------9982 Q ss_pred CCCCCEEEEEEEE---------------EEECCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCHHCCCCCCCCCCEEEEC Q ss_conf 1234303643112---------------2205721321066542313532233324442121000024653445303312 Q gi|254780570|r 79 SSIQPDLICLAGY---------------MRLLSRDFVESYKNKILNIHPSLLPLFPGLHTHRRVLQSGIKITGCTVHMVT 143 (205) Q Consensus 79 ~~~~~Dliv~~g~---------------~~il~~~~l~~~~~~~iN~HpslLP~yrG~~~~~~ai~~g~~~~G~TiH~v~ 143 (205) .+ .|++..-.| .+.+.+++++..+..++=+|| || || + .|+ T Consensus 70 ~~--aDvvy~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~a~~~~i~mHc--LP--Rg-----------~--------EI~ 124 (160) T d1ekxa2 70 AE--VDILYMTRVQKERLDPSEYANVKAQFVLRASDLHNAKANMKVLHP--LP--RV-----------D--------EIA 124 (160) T ss_dssp GG--CSEEEECCCCGGGCCGGGGGGCSCSCCBCGGGGTTCCTTCEEECC--SC--CS-----------S--------SBC T ss_pred CC--CCEEEEECCCCCCCCHHHHHHHHHHHHCCHHHHHHCCCCEEEECC--CC--CC-----------C--------CCC T ss_conf 76--856886235433311677777777764139999753766265247--77--57-----------7--------525 Q ss_pred CCCCCCCE Q ss_conf 32186626 Q gi|254780570|r 144 ANMDEGPI 151 (205) Q Consensus 144 ~~~D~G~I 151 (205) +++|.||= T Consensus 125 ~~V~~~~~ 132 (160) T d1ekxa2 125 TDVDKTPH 132 (160) T ss_dssp GGGTTSTT T ss_pred HHHHCCCC T ss_conf 32215763 No 63 >d1y0ba1 c.61.1.1 (A:1-191) Xanthine phosphoribosyltransferase {Bacillus subtilis [TaxId: 1423]} Probab=34.02 E-value=12 Score=14.99 Aligned_cols=16 Identities=19% Similarity=0.098 Sum_probs=10.0 Q ss_pred HHHHHHCCCCEEEEEC Q ss_conf 8899860895046301 Q gi|254780570|r 46 LVKARKEKVPTFPIPY 61 (205) Q Consensus 46 l~~a~~~~Ip~~~i~~ 61 (205) ...|...++|...+.. T Consensus 66 ~~iA~~L~~p~v~~Rk 81 (191) T d1y0ba1 66 VMTGLKLGVPVVFARK 81 (191) T ss_dssp HHHHHHHTCCEEEEBS T ss_pred HHHHHHCCCEEEEEEE T ss_conf 9998632503899996 No 64 >d1okkd2 c.37.1.10 (D:97-303) GTPase domain of the signal recognition particle receptor FtsY {Thermus aquaticus [TaxId: 271]} Probab=32.83 E-value=13 Score=14.86 Aligned_cols=145 Identities=16% Similarity=0.212 Sum_probs=65.8 Q ss_pred CCEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHH Q ss_conf 665999976--985--01899999997399984799999768888788----8998608950463013233221012432 Q gi|254780570|r 3 RKNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPYKDYISRREHEKAI 74 (205) Q Consensus 3 k~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l 74 (205) ++++..|+- |.| |.+-.|-.+++.. +..|.+|-+|.--..+. .+|+..++|++..+.........++. T Consensus 5 ~~~vi~lvGptGvGKTTTiaKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~i~~~~~~~~~d~~~~~~~~-- 80 (207) T d1okkd2 5 KGRVVLVVGVNGVGKTTTIAKLGRYYQNL--GKKVMFCAGDTFRAAGGTQLSEWGKRLSIPVIQGPEGTDPAALAYDA-- 80 (207) T ss_dssp SSSEEEEECSTTSSHHHHHHHHHHHHHTT--TCCEEEECCCCSSTTHHHHHHHHHHHHTCCEECCCTTCCHHHHHHHH-- T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEEECCCCCCCHHHHHHCCCCCCCEEEECCCCCCHHHHHHHH-- T ss_conf 97799998999998899999999999977--99079998136665402667640545682389616774278899998-- Q ss_pred HHHCCCCCCEEEE--EEEEEEECCCHHHHCCCC--CE---------EECCCCCCCCCCCCCCCCCHHCC--CCCCCCCCE Q ss_conf 1000123430364--311222057213210665--42---------31353223332444212100002--465344530 Q gi|254780570|r 75 LMQLSSIQPDLIC--LAGYMRLLSRDFVESYKN--KI---------LNIHPSLLPLFPGLHTHRRVLQS--GIKITGCTV 139 (205) Q Consensus 75 ~~~l~~~~~Dliv--~~g~~~il~~~~l~~~~~--~~---------iN~HpslLP~yrG~~~~~~ai~~--g~~~~G~Ti 139 (205) ....+..+.|+|+ .+|.++.-+. .++..+. +. ...|-- |+.-.|......+... ....+|+-+ T Consensus 81 ~~~~~~~~~d~ilIDTaGr~~~d~~-l~~el~~~~~~~~~~~~~~p~~~~LV-l~a~~~~~~~~~~~~~~~~~~~~~lI~ 158 (207) T d1okkd2 81 VQAMKARGYDLLFVDTAGRLHTKHN-LMEELKKVKRAIAKADPEEPKEVWLV-LDAVTGQNGLEQAKKFHEAVGLTGVIV 158 (207) T ss_dssp HHHHHHHTCSEEEECCCCCCTTCHH-HHHHHHHHHHHHHHHCTTCCSEEEEE-EETTBCTHHHHHHHHHHHHHCCSEEEE T ss_pred HHHHHHCCCCEEECCCCCCCHHHHH-HHHHHHHHHHHHHHCCCCCCCEEEEE-EECCCCCHHHHHHHHHHHCCCCCEEEE T ss_conf 9999987999997175222311277-88887777777653256787359999-620047167899997502138864898 Q ss_pred EEECCCCCCCCEEE Q ss_conf 33123218662677 Q gi|254780570|r 140 HMVTANMDEGPIIA 153 (205) Q Consensus 140 H~v~~~~D~G~Ii~ 153 (205) -++|+.---|.++. T Consensus 159 TKlDet~~~G~~l~ 172 (207) T d1okkd2 159 TKLDGTAKGGVLIP 172 (207) T ss_dssp ECTTSSCCCTTHHH T ss_pred ECCCCCCCCCHHHH T ss_conf 33688887349999 No 65 >d1ua4a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Pyrococcus furiosus [TaxId: 2261]} Probab=32.36 E-value=11 Score=15.22 Aligned_cols=26 Identities=19% Similarity=0.300 Sum_probs=17.0 Q ss_pred HHHHHHHHCCCC--CCEEEEEEEEEEECC Q ss_conf 124321000123--430364311222057 Q gi|254780570|r 70 HEKAILMQLSSI--QPDLICLAGYMRLLS 96 (205) Q Consensus 70 ~~~~l~~~l~~~--~~Dliv~~g~~~il~ 96 (205) ..+.+.+.+.++ +||++|+.|| +.+. T Consensus 210 ~~e~f~~~l~~~~~~~dl~vlSGl-qmm~ 237 (454) T d1ua4a_ 210 IREEFRESFSEVIKNVQLAILSGL-QALT 237 (454) T ss_dssp CCGGGSTTHHHHGGGCSEEEECCG-GGCC T ss_pred CCHHHHHHHHHHCCCCCEEEEECC-CCCC T ss_conf 439899999972669888999761-0156 No 66 >d1c7qa_ c.80.1.2 (A:) Phosphoglucose isomerase, PGI {Bacillus stearothermophilus [TaxId: 1422]} Probab=32.06 E-value=13 Score=14.78 Aligned_cols=58 Identities=24% Similarity=0.192 Sum_probs=35.5 Q ss_pred CEEEEEECCCCHHHHHHHH------HHHC--C--CCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECC Q ss_conf 6599997698501899999------9973--9--99847999997688887888998608950463013 Q gi|254780570|r 4 KNIVIFISGEGTNMLSLIQ------ATKK--N--DYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYK 62 (205) Q Consensus 4 ~riavl~SG~Gsnl~~Il~------~~~~--~--~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~ 62 (205) +-..+.+|.+|+.++.+.. .+.. + ..... ..|+|+.+++.-...|++.+++++.++.. T Consensus 130 ~t~~iviSKSg~T~ETl~~~~~~~~~l~~~~~~~~~~~~-~~v~t~~~~~~l~~~a~~~~~~~f~~~~~ 197 (442) T d1c7qa_ 130 DLSINVISKSGTTTEPAIAFRIFRDYMEKKYGKEEARKR-IYVTTDRTKGALKKLADQEGYETFVIPDN 197 (442) T ss_dssp CEEEEEECSSSCCHHHHHHHHHHHHHHHHHHCHHHHTTS-EEEEECSSCSHHHHHHHHHTCEEEECCTT T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHHHHCCHHHHHHC-EEECCCCCHHHHHHHHHHHHHHHHHHHHH T ss_conf 603898449988655889999999999873042666526-11123440123433102666555424321 No 67 >d1o6ca_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Bacillus subtilis [TaxId: 1423]} Probab=31.80 E-value=13 Score=14.75 Aligned_cols=112 Identities=11% Similarity=0.103 Sum_probs=55.7 Q ss_pred CCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCE-EEEECCC-CCCCCC----HHHH Q ss_conf 6659999769850---18999999973999847999997688887888998608950-4630132-332210----1243 Q gi|254780570|r 3 RKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPT-FPIPYKD-YISRRE----HEKA 73 (205) Q Consensus 3 k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~-~~i~~~~-~~~~~~----~~~~ 73 (205) |+||++.. |+=. =+..|+++++... .+++.+|+|.....-.-...+.+++.. +-++... ..+... .-.. T Consensus 2 k~Ki~~v~-GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~i~~ 79 (377) T d1o6ca_ 2 KLKVMTVF-GTRPEAIKMAPLVLELKKYP-EIDSYVTVTAQHRQMLDQVLDAFHIKPDFDLNIMKERQTLAEITSNALVR 79 (377) T ss_dssp CEEEEEEE-CSHHHHHHHHHHHHHGGGCT-TEEEEEEECCSCGGGTHHHHHHTTCCCSEECCCCCTTCCHHHHHHHHHHH T ss_pred CCEEEEEE-ECHHHHHHHHHHHHHHHHCC-CCCEEEEEECCCHHHHHHHHHHCCCCCCEEEECCCCCCCHHHHHHHHHHH T ss_conf 84699999-70585999999999997189-99879999379889999998516877753544388998899999999985 Q ss_pred HHHHCCCCCCEEEEEEEEE-EECCCHHHH-CCCCCEEECCCCCCC Q ss_conf 2100012343036431122-205721321-066542313532233 Q gi|254780570|r 74 ILMQLSSIQPDLICLAGYM-RLLSRDFVE-SYKNKILNIHPSLLP 116 (205) Q Consensus 74 l~~~l~~~~~Dliv~~g~~-~il~~~~l~-~~~~~~iN~HpslLP 116 (205) +.+.+.+.+||++++.|-. -.+..-+.. .....++-+|.++.- T Consensus 80 ~~~~~~~~kpD~v~v~GDr~e~la~a~aa~~~~Ipi~HiegG~~s 124 (377) T d1o6ca_ 80 LDELFKDIKPDIVLVHGDTTTTFAGSLAAFYHQIAVGHVEAGLRT 124 (377) T ss_dssp HHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEESCCCCC T ss_pred HHHHHHHCCCCEEEEEECCCCCCHHHHHHHHCCCEEEEEECCCCC T ss_conf 056665336653676403454301566653114227999514565 No 68 >d1ml4a2 c.78.1.1 (A:152-308) Aspartate carbamoyltransferase catalytic subunit {Archaeon Pyrococcus abyssi [TaxId: 29292]} Probab=29.87 E-value=14 Score=14.53 Aligned_cols=98 Identities=15% Similarity=0.153 Sum_probs=47.9 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEE--CCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCC Q ss_conf 66599997698-5018999999973999847999997--68888788899860895046301323322101243210001 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFS--DNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLS 79 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Vis--n~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~ 79 (205) .+||++.+-+. +..+.+++.... .+++++..+.- -.++....+.+++.+..+..... +-+.+. T Consensus 4 gl~i~~vGD~~~srV~~Sli~~~~--~~g~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~d------------~~~av~ 69 (157) T d1ml4a2 4 GLKIGLLGDLKYGRTVHSLAEALT--FYDVELYLISPELLRMPRHIVEELREKGMKVVETTT------------LEDVIG 69 (157) T ss_dssp SEEEEEESCTTTCHHHHHHHHHGG--GSCEEEEEECCGGGCCCHHHHHHHHHTTCCEEEESC------------THHHHT T ss_pred CCEEEEECCCCCCHHHHHHHHHHH--HCCCCEEEECCCHHHCCHHHHHHHHHHCCCCEEECC------------HHHHHC T ss_conf 999999847866759999999999--669847997162110116778777764146414258------------878524 Q ss_pred CCCCEEEEEEEE----------------EEECCCHHHHCCCCCEEECCCCCCCCCCC Q ss_conf 234303643112----------------22057213210665423135322333244 Q gi|254780570|r 80 SIQPDLICLAGY----------------MRLLSRDFVESYKNKILNIHPSLLPLFPG 120 (205) Q Consensus 80 ~~~~Dliv~~g~----------------~~il~~~~l~~~~~~~iN~HpslLP~yrG 120 (205) +.|++..-.| ...+..+.++..+..++=+|| || || T Consensus 70 --~aDvvy~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~mHp--lP--Rg 120 (157) T d1ml4a2 70 --KLDVLYVTRIQKERFPDEQEYLKVKGSYQVNLKVLEKAKDELRIMHP--LP--RV 120 (157) T ss_dssp --TCSEEEECCCCGGGSSSHHHHHTTTTCCCBCTTGGGGSCTTCEEECC--SC--CS T ss_pred --CCCEEEEECCCCCCCCCHHHHHHHCCHHCCCHHHHHHCCCCEEEECC--CC--CC T ss_conf --38189964333443430025776600312589999626877587047--77--57 No 69 >d1duvg2 c.78.1.1 (G:151-333) Ornithine transcarbamoylase {Escherichia coli [TaxId: 562]} Probab=29.29 E-value=15 Score=14.47 Aligned_cols=32 Identities=13% Similarity=-0.002 Sum_probs=16.7 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 6659999769850189999999739998479999 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGV 36 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~V 36 (205) ..+||+.+-|.-.-+.+++.++.. +++++.++ T Consensus 5 ~l~i~~vGD~~nnv~~Sli~~~~~--~g~~l~~~ 36 (183) T d1duvg2 5 EMTLVYAGDARNNMGNSMLEAAAL--TGLDLRLV 36 (183) T ss_dssp GCEEEEESCTTSHHHHHHHHHHHH--HCCEEEEE T ss_pred CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEE T ss_conf 878999937824899999999998--49979997 No 70 >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} Probab=28.80 E-value=15 Score=14.41 Aligned_cols=90 Identities=12% Similarity=0.153 Sum_probs=45.0 Q ss_pred EEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHC-----CCCEEEEECCCCCCCCCHHHHHHHHCC Q ss_conf 599997698501899999997399984799999768888788899860-----895046301323322101243210001 Q gi|254780570|r 5 NIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKE-----KVPTFPIPYKDYISRREHEKAILMQLS 79 (205) Q Consensus 5 riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~-----~Ip~~~i~~~~~~~~~~~~~~l~~~l~ 79 (205) ||.=+++|.|.....|+++......+..+..+..+ ++...++.|++. +++...++... .+-+++......... T Consensus 43 ~VLDiGcG~G~~~~~ll~~l~~~~~~~~~~~~~vD-~s~~~l~~a~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~ 120 (280) T d1jqea_ 43 KILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVE-PSAEQIAKYKELVAKISNLENVKFAWHK-ETSSEYQSRMLEKKE 120 (280) T ss_dssp EEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEEC-CCHHHHHHHHHHHTTCCSCTTEEEEEEC-SCHHHHHHHHTTSSS T ss_pred EEEEECCCCCHHHHHHHHHHHHHCCCCCEEEEEEE-CCHHHHHHHHHHHHHCCCCCCCCCCCHH-HHHHHHCCHHCCCCC T ss_conf 69998487898889999875553247753999980-8589999999887524655322111002-245432001105677 Q ss_pred CCCCEEEEEEEEEEECC Q ss_conf 23430364311222057 Q gi|254780570|r 80 SIQPDLICLAGYMRLLS 96 (205) Q Consensus 80 ~~~~Dliv~~g~~~il~ 96 (205) ....|+|++...+.-++ T Consensus 121 ~~~fD~I~~~~~l~~~~ 137 (280) T d1jqea_ 121 LQKWDFIHMIQMLYYVK 137 (280) T ss_dssp CCCEEEEEEESCGGGCS T ss_pred CCCEEEEEECCCEECCC T ss_conf 78644999813124478 No 71 >d4ubpc2 c.1.9.2 (C:132-434,C:484-570) alpha-subunit of urease, catalytic domain {Bacillus pasteurii [TaxId: 1474]} Probab=28.61 E-value=15 Score=14.39 Aligned_cols=89 Identities=17% Similarity=0.254 Sum_probs=56.3 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH Q ss_conf 66599997698501899999997399984799999768888--------7888998608950463013233221012432 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI 74 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l 74 (205) ..++.+|.-|+.|.-++|.+.+..+-+..++ ++|- ..|.-|.++.+++-+. .|..+...|-+.. T Consensus 60 P~N~g~~gkGn~s~~~~l~eqi~aGa~GlKi------HEDwGatpa~id~~L~vad~~dvqv~iH--tDtlNE~gfve~T 131 (390) T d4ubpc2 60 PINVGILGKGHGSSIAPIMEQIDAGAAGLKI------HEDWGATPASIDRSLTVADEADVQVAIH--SDTLNEAGFLEDT 131 (390) T ss_dssp SSEEEEEEECCCSSHHHHHHHHHHTCCEEEE------EGGGCCCHHHHHHHHHHHHHHTCEEEEE--CCTTCSSCCHHHH T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHHEEEC------CCCCCCCHHHHHHHHHHHHCCCCEEEEE--CCCCCCCEEHHHH T ss_conf 8231152326669867999999865500501------3113647789999999864059268985--3875101011658 Q ss_pred HHHCC--------------CCCCEEEEEEEEEEECCCHH Q ss_conf 10001--------------23430364311222057213 Q gi|254780570|r 75 LMQLS--------------SIQPDLICLAGYMRLLSRDF 99 (205) Q Consensus 75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~ 99 (205) +..+. .+.||++-++|+.-+||.+- T Consensus 132 ~~a~~gRtiH~~HtEGaGGGHaPDii~~~g~~nvLpsST 170 (390) T d4ubpc2 132 LRAINGRVIHSFHVEGAGGGHAPDIMAMAGHPNVLPSST 170 (390) T ss_dssp HHHHTTCCEEETTTTSTTSSSTTTGGGGGGSTTEEEBCC T ss_pred HHHHCCCEEECCCCCCCCCCCCCHHHHHCCCCCCCCCCC T ss_conf 998679621114678888898832687637786557899 No 72 >d1oj7a_ e.22.1.2 (A:) Hypothetical oxidoreductase yqhD {Escherichia coli [TaxId: 562]} Probab=28.42 E-value=15 Score=14.37 Aligned_cols=78 Identities=9% Similarity=0.037 Sum_probs=38.2 Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEECCCC---CHHHHHHHH--CCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCEEE Q ss_conf 9850189999999739998479999976888---878889986--08950463013233221012432100012343036 Q gi|254780570|r 12 GEGTNMLSLIQATKKNDYPAEIVGVFSDNSN---AQGLVKARK--EKVPTFPIPYKDYISRREHEKAILMQLSSIQPDLI 86 (205) Q Consensus 12 G~Gsnl~~Il~~~~~~~~~~eI~~Visn~~d---a~~l~~a~~--~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~~~Dli 86 (205) |.|+ +..|-+.+.. ...+ +|+|.... .+.+++... .++.+.+++.-......+.=++..+.+++.++|+| T Consensus 18 G~g~-l~~l~~~~~~---~~~v-liV~~~~~~~~~g~~~~v~~~L~~~~~~~f~~v~~~p~~~~v~~~~~~~~~~~~D~I 92 (390) T d1oj7a_ 18 GKGA-IAGLREQIPH---DARV-LITYGGGSVKKTGVLDQVLDALKGMDVLEFGGIEPNPAYETLMNAVKLVREQKVTFL 92 (390) T ss_dssp STTG-GGGHHHHSCT---TCEE-EEEECSSHHHHHSHHHHHHHHTTTSEEEEECCCCSSCBHHHHHHHHHHHHHHTCCEE T ss_pred CCCH-HHHHHHHHHC---CCCE-EEEECCCHHHHCCHHHHHHHHCCCCCEEEEECCCCCCCHHHHHHHHHHHHHCCCCEE T ss_conf 5699-9999999867---9988-999897168774399999997189947999282379999999999999763378779 Q ss_pred EEEEEEEE Q ss_conf 43112220 Q gi|254780570|r 87 CLAGYMRL 94 (205) Q Consensus 87 v~~g~~~i 94 (205) |-.|=+.. T Consensus 93 IavGGGs~ 100 (390) T d1oj7a_ 93 LAVGGGSV 100 (390) T ss_dssp EEEESHHH T ss_pred EECCCCCC T ss_conf 85478854 No 73 >d1tvca2 c.25.1.2 (A:111-251) Methane monooxygenase component C, MmoC {Methylococcus capsulatus [TaxId: 414]} Probab=28.20 E-value=15 Score=14.34 Aligned_cols=38 Identities=18% Similarity=0.267 Sum_probs=26.4 Q ss_pred CEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 65999976985-018999999973999847999997688 Q gi|254780570|r 4 KNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 4 ~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) +.+++++.|.| +-+.++++.....+.+.+|.++.+++. T Consensus 9 ~p~vliagGtGItP~~s~l~~~~~~~~~~~v~l~~~~r~ 47 (141) T d1tvca2 9 APRYFVAGGTGLAPVVSMVRQMQEWTAPNETRIYFGVNT 47 (141) T ss_dssp SCEEEEEESSTTHHHHHHHHHHHHHTCCSCEEEEEECSS T ss_pred CCEEEEECCHHHHHHHHHHHHHHHCCCCCCEEEEEECCC T ss_conf 848999774409999999999998399983577751122 No 74 >d2qv7a1 e.52.1.2 (A:1-312) Diacylglycerol kinase DgkB {Staphylococcus aureus [TaxId: 1280]} Probab=28.16 E-value=15 Score=14.34 Aligned_cols=38 Identities=18% Similarity=0.140 Sum_probs=23.3 Q ss_pred CCCEEEEEE---CCCCHHH---HHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 866599997---6985018---999999973999847999997688 Q gi|254780570|r 2 IRKNIVIFI---SGEGTNM---LSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 2 ~k~riavl~---SG~Gsnl---~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) |+||+.|+. ||.|... ..+...+... ..++..+.|..+ T Consensus 1 ~~kr~~vi~NP~SG~~~~~~~~~~~~~~l~~~--~~~~~~~~t~~~ 44 (312) T d2qv7a1 1 MRKRARIIYNPTSGKEQFKRELPDALIKLEKA--GYETSAYATEKI 44 (312) T ss_dssp CCEEEEEEECTTSTTSCHHHHHHHHHHHHHHT--TEEEEEEECCST T ss_pred CCCEEEEEECCCCCCCCHHHHHHHHHHHHHHC--CCEEEEEECCCC T ss_conf 98169999876889975799999999999977--992899982892 No 75 >d1vima_ c.80.1.3 (A:) Hypothetical protein AF1796 {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} Probab=28.01 E-value=15 Score=14.32 Aligned_cols=11 Identities=36% Similarity=0.742 Sum_probs=5.1 Q ss_pred EEEEEECCCCH Q ss_conf 59999769850 Q gi|254780570|r 5 NIVIFISGEGT 15 (205) Q Consensus 5 riavl~SG~Gs 15 (205) -+++++|.+|. T Consensus 84 Dl~i~iS~sG~ 94 (192) T d1vima_ 84 DVLVGISGSGE 94 (192) T ss_dssp CEEEEECSSSC T ss_pred CCCEECCCCCC T ss_conf 30002133111 No 76 >d2hxma1 c.18.1.1 (A:82-304) Uracil-DNA glycosylase {Human (Homo sapiens) [TaxId: 9606]} Probab=27.97 E-value=9.1 Score=15.90 Aligned_cols=98 Identities=14% Similarity=0.214 Sum_probs=45.2 Q ss_pred HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEE----EEECCCCCCC-----CCHHHHHHHHCCCCCCEEE Q ss_conf 189999999739998479999976888878889986089504----6301323322-----1012432100012343036 Q gi|254780570|r 16 NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTF----PIPYKDYISR-----REHEKAILMQLSSIQPDLI 86 (205) Q Consensus 16 nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~----~i~~~~~~~~-----~~~~~~l~~~l~~~~~Dli 86 (205) .|++|++..... ++. ...+..+.++.=.+.||=.. ++....-.+. +.|.+.+++.|.+.+..+| T Consensus 88 SL~NI~kel~~d-~~~------~~~~~~g~L~~Wa~QGVLLLNt~LTv~~g~~~SH~~~gW~~ft~~ii~~l~~~~~~vV 160 (223) T d2hxma1 88 SLENIYKELSTD-IED------FVHPGHGDLSGWAKQGVLLLNAVLTVRAHQANSHKERGWEQFTDAVVSWLNQNSNGLV 160 (223) T ss_dssp HHHHHHHHHHHH-CTT------CCCCSSCCTHHHHHTTEEEEESSCCEETTBTTTTTTSSHHHHHHHHHHHHHHHCCSCE T ss_pred CHHHHHHHHHHH-HCC------CCCCCCCCHHHHHCCCEEEEECCEEEECCCCCCCHHHHHHHHHHHHHHHHHCCCCCEE T ss_conf 199999999876-356------8788866135442077688865167875402474026899999999999865467839 Q ss_pred EEEEEEEEC--CCHHHHCCCCCEE-ECCCCCCCCCCCC Q ss_conf 431122205--7213210665423-1353223332444 Q gi|254780570|r 87 CLAGYMRLL--SRDFVESYKNKIL-NIHPSLLPLFPGL 121 (205) Q Consensus 87 v~~g~~~il--~~~~l~~~~~~~i-N~HpslLP~yrG~ 121 (205) .+. |+.-- -..++..-++.+| --|||.|-.|||. T Consensus 161 fiL-WG~~A~~~~~~i~~~~h~il~~~HPSPls~~~gF 197 (223) T d2hxma1 161 FLL-WGSYAQKKGSAIDRKRHHVLQTAHPSPLSVYRGF 197 (223) T ss_dssp EEE-ESHHHHHHTTTSCTTTSEEEEECCCSTTTGGGTT T ss_pred EEE-EEEHHHHHHHHHCCCCCEEEEECCCCCCCCCCCC T ss_conf 987-3232789988625689879982799721107798 No 77 >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} Probab=27.91 E-value=16 Score=14.31 Aligned_cols=45 Identities=13% Similarity=0.268 Sum_probs=25.8 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCC Q ss_conf 665999976985018999999973999847999997688887888998608 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEK 53 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~ 53 (205) .+++.|+ |.|...++++.+..++. .+|. |.||.....-..+++++ T Consensus 18 ~k~vlIl--GaGGaarai~~aL~~~~--~~i~--I~nR~~~~a~~l~~~~~ 62 (171) T d1p77a1 18 NQHVLIL--GAGGATKGVLLPLLQAQ--QNIV--LANRTFSKTKELAERFQ 62 (171) T ss_dssp TCEEEEE--CCSHHHHTTHHHHHHTT--CEEE--EEESSHHHHHHHHHHHG T ss_pred CCEEEEE--CCCHHHHHHHHHHCCCC--CEEE--ECCCHHHHHHHHHHHHH T ss_conf 9979998--97399999999870467--4565--23633788999999985 No 78 >d1l2la_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Probab=27.82 E-value=14 Score=14.69 Aligned_cols=24 Identities=17% Similarity=0.390 Sum_probs=16.1 Q ss_pred HHHHHHHCCCC--CCEEEEEEEEEEEC Q ss_conf 24321000123--43036431122205 Q gi|254780570|r 71 EKAILMQLSSI--QPDLICLAGYMRLL 95 (205) Q Consensus 71 ~~~l~~~l~~~--~~Dliv~~g~~~il 95 (205) .+.+.+.++++ +||++|+.|| +.+ T Consensus 209 ~e~f~~~l~~~~~~pdl~vlSGl-q~l 234 (451) T d1l2la_ 209 REEWIERFEEIAKRSELAIISGL-HPL 234 (451) T ss_dssp CHHHHHSHHHHHTTCSEEEEECC-TTC T ss_pred CHHHHHHHHHHHCCCCEEEEECC-CCC T ss_conf 49999999976217888999463-101 No 79 >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} Probab=27.79 E-value=16 Score=14.29 Aligned_cols=70 Identities=11% Similarity=0.022 Sum_probs=35.2 Q ss_pred CCEEEEEECCCCHHHHH-HHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 66599997698501899-99999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 3 RKNIVIFISGEGTNMLS-LIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 3 k~riavl~SG~Gsnl~~-Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) ..|+++.+.|+ -.+. .+.+..... ..++ ++++......-+.+++++++... .+ ++ +.+ +. T Consensus 1 tirvgiiG~G~--~~~~~~~~~l~~~~-~~~~--~~~d~~~~~~~~~~~~~~~~~~~------~~---~~----~ll-~~ 61 (167) T d1xeaa1 1 SLKIAMIGLGD--IAQKAYLPVLAQWP-DIEL--VLCTRNPKVLGTLATRYRVSATC------TD---YR----DVL-QY 61 (167) T ss_dssp CEEEEEECCCH--HHHHTHHHHHTTST-TEEE--EEECSCHHHHHHHHHHTTCCCCC------SS---TT----GGG-GG T ss_pred CEEEEEECCCH--HHHHHHHHHHHHCC-CCEE--EEEECCHHHHHHHHHHCCCCCCC------CC---HH----HHC-CC T ss_conf 96999996979--99999999998398-9689--99989999999999751434322------66---88----812-34 Q ss_pred CCEEEEEEEE Q ss_conf 4303643112 Q gi|254780570|r 82 QPDLICLAGY 91 (205) Q Consensus 82 ~~Dliv~~g~ 91 (205) ++|+++.+.. T Consensus 62 ~iD~V~I~tp 71 (167) T d1xeaa1 62 GVDAVMIHAA 71 (167) T ss_dssp CCSEEEECSC T ss_pred CCCEECCCCC T ss_conf 4320013332 No 80 >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} Probab=25.88 E-value=17 Score=14.07 Aligned_cols=49 Identities=22% Similarity=0.321 Sum_probs=27.1 Q ss_pred CEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEE Q ss_conf 6599997698-501899999997399984799999768888788899860895046 Q gi|254780570|r 4 KNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFP 58 (205) Q Consensus 4 ~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~ 58 (205) |||+|...|. |+ +|.++.++..+..+|.+ .|+ +...+++|++.++.... T Consensus 2 k~I~IIG~G~mG~---sla~~L~~~g~~~~I~~--~D~-~~~~~~~a~~~~~~~~~ 51 (171) T d2g5ca2 2 QNVLIVGVGFMGG---SFAKSLRRSGFKGKIYG--YDI-NPESISKAVDLGIIDEG 51 (171) T ss_dssp CEEEEESCSHHHH---HHHHHHHHTTCCSEEEE--ECS-CHHHHHHHHHTTSCSEE T ss_pred CEEEEECCCHHHH---HHHHHHHHCCCCEEEEE--EEC-CHHHHHHHHHHHCCHHH T ss_conf 7899994198999---99999996399708999--979-86889999984112222 No 81 >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} Probab=25.69 E-value=17 Score=14.04 Aligned_cols=39 Identities=13% Similarity=0.215 Sum_probs=20.0 Q ss_pred CCCCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 98665999976985018999999973999847999997688 Q gi|254780570|r 1 MIRKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 1 M~k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) |++++|.|++ |+|.--..|++...+...-.+|. +++.++ T Consensus 12 m~~k~IlItG-aTG~iG~~l~~~Ll~~g~~~~v~-~~~R~~ 50 (232) T d2bkaa1 12 MQNKSVFILG-ASGETGRVLLKEILEQGLFSKVT-LIGRRK 50 (232) T ss_dssp HTCCEEEEEC-TTSHHHHHHHHHHHHHTCCSEEE-EEESSC T ss_pred CCCCEEEEEC-CCCHHHHHHHHHHHHCCCCCEEE-EEECCH T ss_conf 7999899988-98389999999999679987799-986681 No 82 >d2ioja1 c.98.2.2 (A:206-325) Hypothetical protein AF1212 {Archaeoglobus fulgidus [TaxId: 2234]} Probab=25.62 E-value=17 Score=14.04 Aligned_cols=34 Identities=15% Similarity=0.163 Sum_probs=21.9 Q ss_pred EEEE-EEEC--CCCCHHHHHHHHCCCCEEEEECCCCC Q ss_conf 7999-9976--88887888998608950463013233 Q gi|254780570|r 32 EIVG-VFSD--NSNAQGLVKARKEKVPTFPIPYKDYI 65 (205) Q Consensus 32 eI~~-Visn--~~da~~l~~a~~~~Ip~~~i~~~~~~ 65 (205) .+.+ |+|. .|+...+++|++.++|....++.-|. T Consensus 68 ~i~~iIltgg~~p~~~i~~la~~~~ipil~t~~dTf~ 104 (120) T d2ioja1 68 NVRCLILTGNLEPVQLVLTKAEERGVPVILTGHDTLT 104 (120) T ss_dssp TEEEEEEETTCCCCHHHHHHHHHHTCCEEECSSCHHH T ss_pred CCEEEEEECCCCCCHHHHHHHHHCCCEEEEECCCHHH T ss_conf 9519999799998889999997679839997787999 No 83 >d1f6da_ c.87.1.3 (A:) UDP-N-acetylglucosamine 2-epimerase {Escherichia coli [TaxId: 562]} Probab=25.55 E-value=17 Score=14.03 Aligned_cols=111 Identities=13% Similarity=0.121 Sum_probs=53.6 Q ss_pred CEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCC-CEEEEECCCCC-CCCC----HHHHH Q ss_conf 659999769850---189999999739998479999976888878889986089-50463013233-2210----12432 Q gi|254780570|r 4 KNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV-PTFPIPYKDYI-SRRE----HEKAI 74 (205) Q Consensus 4 ~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~I-p~~~i~~~~~~-~~~~----~~~~l 74 (205) +||++.. |+=. -+..|++++++.. .+++.+++|..-....-+..+..++ |.+.++..... +... .-..+ T Consensus 1 MKi~~v~-GtR~e~~kl~pli~~l~~~~-~~~~~li~tG~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~ 78 (376) T d1f6da_ 1 MKVLTVF-GTRPEAIKMAPLVHALAKDP-FFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRILEGL 78 (376) T ss_dssp CEEEEEE-CSHHHHHHHHHHHHHHHHCT-TCEEEEEECCTTGGGGHHHHHHTTCCCSEECCCCSSSSCHHHHHHHHHHHH T ss_pred CEEEEEE-EHHHHHHHHHHHHHHHHHCC-CCCEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHH T ss_conf 9699999-82673999999999997389-987799990889899999998628787744004889998999999999864 Q ss_pred HHHCCCCCCEEEEEEEEE-EECCCHH-HHCCCCCEEECCCCCCC Q ss_conf 100012343036431122-2057213-21066542313532233 Q gi|254780570|r 75 LMQLSSIQPDLICLAGYM-RLLSRDF-VESYKNKILNIHPSLLP 116 (205) Q Consensus 75 ~~~l~~~~~Dliv~~g~~-~il~~~~-l~~~~~~~iN~HpslLP 116 (205) .+.+.+.+||+|++.|=. -.+..-+ .......++-+|.++.. T Consensus 79 ~~~~~~~kPD~v~v~GDr~e~la~a~aa~~~~ipi~HiegG~~s 122 (376) T d1f6da_ 79 KPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRT 122 (376) T ss_dssp HHHHHHHCCSEEEEETTCHHHHHHHHHHHTTTCCEEEESCCCCC T ss_pred HHHHHHCCCCCEEEECCCCCHHHHHHHHHHHCCEEEEEECCCCC T ss_conf 78897456762243103443136899987407538998524465 No 84 >d2fiqa1 c.1.10.7 (A:1-420) Putative tagatose 6-phosphate kinase 1 GatZ {Escherichia coli [TaxId: 562]} Probab=24.64 E-value=18 Score=13.91 Aligned_cols=46 Identities=20% Similarity=0.167 Sum_probs=32.1 Q ss_pred HHHHHHHHHCCCCCCEEEEEEECCCCC--HHHHHHHHCCCCEEEEECCC Q ss_conf 899999997399984799999768888--78889986089504630132 Q gi|254780570|r 17 MLSLIQATKKNDYPAEIVGVFSDNSNA--QGLVKARKEKVPTFPIPYKD 63 (205) Q Consensus 17 l~~Il~~~~~~~~~~eI~~Visn~~da--~~l~~a~~~~Ip~~~i~~~~ 63 (205) |+.|+.+.++|+ ..-|..|+|.+|.- ..+++|+..+.|..+....+ T Consensus 1 l~~~~~~~~~g~-~~gi~SvCsa~p~Vi~Aal~~a~~~~~pvlieAT~N 48 (420) T d2fiqa1 1 MKTLIARHKAGE-HIGICSVCSAHPLVIEAALAFDRNSTRKVLIEATSN 48 (420) T ss_dssp CHHHHHHHHTTC-CBCEEEECCCCHHHHHHHHHHTTTSCCCEEEEEETT T ss_pred CHHHHHHHHCCC-CCEEEEECCCCHHHHHHHHHHHHHCCCCEEEEECCC T ss_conf 956788740899-770332678999999999999985499789980311 No 85 >d2phza1 c.92.2.4 (A:20-296) Iron-uptake system-binding protein FeuA {Bacillus subtilis [TaxId: 1423]} Probab=24.51 E-value=15 Score=14.42 Aligned_cols=18 Identities=11% Similarity=-0.202 Sum_probs=11.9 Q ss_pred HHHHHHHHHCCCEEEECC Q ss_conf 999999998695699898 Q gi|254780570|r 180 YPLALKYTILGKTSNSND 197 (205) Q Consensus 180 ~~~~i~~~~~g~i~~~~~ 197 (205) ..+.++.+-+||+...+. T Consensus 236 ~w~~l~AVkngrVy~~~~ 253 (277) T d2phza1 236 IWKSLKAVKEDHVYVNSV 253 (277) T ss_dssp HHHHSHHHHTTCEEECSS T ss_pred CCCCCCHHHCCCEEEECC T ss_conf 621698615893899660 No 86 >d1ejxc2 c.1.9.2 (C:1130-1422,C:1476-1567) alpha-subunit of urease, catalytic domain {Klebsiella aerogenes [TaxId: 28451]} Probab=24.31 E-value=18 Score=13.87 Aligned_cols=89 Identities=15% Similarity=0.119 Sum_probs=53.8 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCC--------HHHHHHHHCCCCEEEEECCCCCCCCCHHHHH Q ss_conf 66599997698501899999997399984799999768888--------7888998608950463013233221012432 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNA--------QGLVKARKEKVPTFPIPYKDYISRREHEKAI 74 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da--------~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l 74 (205) ..++.+|.-|++|.-++|.+....|-+..++ ++|- ..|.-|.++.+++... .|..+...|-+.. T Consensus 59 P~N~g~~gkGn~s~~~~l~eqi~AGa~GlKi------HEDwGatpa~id~~L~vad~~dvqv~iH--tDtlNE~gfvedT 130 (385) T d1ejxc2 59 PVNIGLLGKGNVSQPDALREQVAAGVIGLKI------HEDWGATPAAIDCALTVADEMDIQVALH--SDTLNESGFVEDT 130 (385) T ss_dssp SSEEEEEEECCCSSHHHHHHHHHHTCSEEEE------EGGGCCCHHHHHHHHHHHHHHTCEEEEE--CCTTCSSCCHHHH T ss_pred CCCEEEEECCCCCCHHHHHHHHHHHHCEECC------CCCCCCCHHHHHHHHHHHHHCCCEEEEE--CCCCCCCCCCHHH T ss_conf 8331052116669868999999711321447------7523567589999987675418358976--0535400200214 Q ss_pred HHHCC--------------CCCCEEEEEEEEEEECCCHH Q ss_conf 10001--------------23430364311222057213 Q gi|254780570|r 75 LMQLS--------------SIQPDLICLAGYMRLLSRDF 99 (205) Q Consensus 75 ~~~l~--------------~~~~Dliv~~g~~~il~~~~ 99 (205) +..++ .+.||++-++|+.-+||.+- T Consensus 131 ~~a~~gRtiH~~H~EGaGGGHAPDii~~~~~~nvlpsST 169 (385) T d1ejxc2 131 LAAIGGRTIHTFHTEGAGGGHAPDIITACAHPNILPSST 169 (385) T ss_dssp HHHHTTCCEEESSTTSTTSSSTTTGGGGGGCTTEEEEEE T ss_pred HHHHCCCCEEEEECCCCCCCCCCHHHHHHCCCCCCCCCC T ss_conf 887579730332025677786631567624685357899 No 87 >d1es6a2 b.31.1.1 (A:201-321) EV matrix protein {Ebola virus [TaxId: 205488]} Probab=24.11 E-value=10 Score=15.64 Aligned_cols=15 Identities=40% Similarity=0.643 Sum_probs=13.1 Q ss_pred CCCCCCCCCCCCCCC Q ss_conf 532233324442121 Q gi|254780570|r 111 HPSLLPLFPGLHTHR 125 (205) Q Consensus 111 HpslLP~yrG~~~~~ 125 (205) -|-|||+|-|..|+. T Consensus 85 ipvllpkyigldpis 99 (121) T d1es6a2 85 IPVLLPKYIGLDPVA 99 (121) T ss_dssp EEEECCTTSCCCCTT T ss_pred EEEECCCCCCCCCCC T ss_conf 236201102668789 No 88 >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} Probab=23.83 E-value=18 Score=13.81 Aligned_cols=44 Identities=11% Similarity=0.108 Sum_probs=26.7 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHC Q ss_conf 66599997698501899999997399984799999768888788899860 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKE 52 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~ 52 (205) .||+.|+ |.|...++++.+..... .+ ..|.||.....-+.++.+ T Consensus 18 ~k~vlIl--GaGGaarai~~al~~~g--~~--i~I~nRt~~ka~~l~~~~ 61 (170) T d1nyta1 18 GLRILLI--GAGGASRGVLLPLLSLD--CA--VTITNRTVSRAEELAKLF 61 (170) T ss_dssp TCEEEEE--CCSHHHHHHHHHHHHTT--CE--EEEECSSHHHHHHHHHHT T ss_pred CCEEEEE--CCCHHHHHHHHHHCCCC--EE--EEECCCHHHHHHHHHHHH T ss_conf 9989998--97589899999861552--37--973132177899999998 No 89 >d1p8aa_ c.44.1.1 (A:) Tyrosine phosphatase {Tritrichomonas foetus [TaxId: 5724]} Probab=23.74 E-value=18 Score=13.80 Aligned_cols=56 Identities=5% Similarity=0.055 Sum_probs=33.8 Q ss_pred CCCEEEEEECCCC--H-HHHHHHHHHHCCCCCCEEEEEEE----CCCCCHHHHHHHHCCCCEE Q ss_conf 8665999976985--0-18999999973999847999997----6888878889986089504 Q gi|254780570|r 2 IRKNIVIFISGEG--T-NMLSLIQATKKNDYPAEIVGVFS----DNSNAQGLVKARKEKVPTF 57 (205) Q Consensus 2 ~k~riavl~SG~G--s-nl~~Il~~~~~~~~~~eI~~Vis----n~~da~~l~~a~~~~Ip~~ 57 (205) -|++|.+.+.||- | =+++|++....+.....-+++.. ...+......++++|++.. T Consensus 3 ~k~~VLFVC~gN~cRSpmAEai~~~~~~~~~~v~SAg~~~~~~g~~~~~~a~~~l~~~gi~~~ 65 (146) T d1p8aa_ 3 EKKAVLFVCLGNICRSPACEGICRDMVGDKLIIDSAATSGFHVGQSPDTRSQKVCKSNGVDIS 65 (146) T ss_dssp CCCCEEEESSSSCSSSTTHHHHHHHHHSSCSSCEEECSCTTSCSCSCTHHHHHHHHHHSCCCC T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHCCCHH T ss_conf 999899997976899999999999866687137767751445689886268999997176202 No 90 >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} Probab=23.63 E-value=18 Score=13.79 Aligned_cols=82 Identities=15% Similarity=0.173 Sum_probs=36.8 Q ss_pred CCEEEEEECCCCHHH-HHHHHHHHCCCCCCEEEEEEECCCCCHHHHHHHHCCCCEEEEECCCCCCCCCHHHHHHHHCCCC Q ss_conf 665999976985018-9999999739998479999976888878889986089504630132332210124321000123 Q gi|254780570|r 3 RKNIVIFISGEGTNM-LSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKVPTFPIPYKDYISRREHEKAILMQLSSI 81 (205) Q Consensus 3 k~riavl~SG~Gsnl-~~Il~~~~~~~~~~eI~~Visn~~da~~l~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~l~~~ 81 (205) +-|+ +|+.|.++.+ .++.+.+.+. .++|. ++++.....-+.+++.+...+..+.. +.++.++.+.+..+++ T Consensus 4 ~gK~-~lITGas~GIG~aia~~l~~~--G~~V~--~~~r~~~~l~~~~~~~~~~~~~~Dv~---~~~~v~~~~~~~~~~~ 75 (242) T d1ulsa_ 4 KDKA-VLITGAAHGIGRATLELFAKE--GARLV--ACDIEEGPLREAAEAVGAHPVVMDVA---DPASVERGFAEALAHL 75 (242) T ss_dssp TTCE-EEEESTTSHHHHHHHHHHHHT--TCEEE--EEESCHHHHHHHHHTTTCEEEECCTT---CHHHHHHHHHHHHHHH T ss_pred CCCE-EEEECCCCHHHHHHHHHHHHC--CCEEE--EEECCHHHHHHHHHHCCCEEEEEECC---CHHHHHHHHHHHHHHC T ss_conf 9989-999388888999999999987--99999--99798789999999729849999569---9999999999999855 Q ss_pred -CCEEEE-EEEEE Q ss_conf -430364-31122 Q gi|254780570|r 82 -QPDLIC-LAGYM 92 (205) Q Consensus 82 -~~Dliv-~~g~~ 92 (205) .+|.+| .||.. T Consensus 76 g~iDilVnnAG~~ 88 (242) T d1ulsa_ 76 GRLDGVVHYAGIT 88 (242) T ss_dssp SSCCEEEECCCCC T ss_pred CCCEEEEECCCCC T ss_conf 9960999887444 No 91 >d1wu2a3 c.57.1.2 (A:181-324) MoeA, central domain {Pyrococcus horikoshii, PH1647 [TaxId: 53953]} Probab=22.99 E-value=19 Score=13.70 Aligned_cols=76 Identities=13% Similarity=0.054 Sum_probs=36.4 Q ss_pred CCCEEEEEECCCCH---HHHHHHHHHHCCCCCCEEEEEEECCCCCHHHH-HHHHCCCCEEEEECCCCCCCCCHHHHHHHH Q ss_conf 86659999769850---18999999973999847999997688887888-998608950463013233221012432100 Q gi|254780570|r 2 IRKNIVIFISGEGT---NMLSLIQATKKNDYPAEIVGVFSDNSNAQGLV-KARKEKVPTFPIPYKDYISRREHEKAILMQ 77 (205) Q Consensus 2 ~k~riavl~SG~Gs---nl~~Il~~~~~~~~~~eI~~Visn~~da~~l~-~a~~~~Ip~~~i~~~~~~~~~~~~~~l~~~ 77 (205) +|+|++++.+|+== ..+.- ...+ +| . ..++..+. .+++.|+.......-. .+.+...+.+.+. T Consensus 1 vkPrV~iistG~Elv~~~~~~~---~~~g----~i---~--dsN~~~L~~~l~~~G~~v~~~~iv~-Dd~~~i~~~l~~~ 67 (144) T d1wu2a3 1 VKPKVGIIITGSELIEEPSEEG---FKEG----KI---V--ETNSIMLQGLVEKFFGEPILYGVLP-DDESIIKETLEKA 67 (144) T ss_dssp CCCEEEEEEECTTEESSCCHHH---HHTT----CE---E--CCHHHHHHHHHHHTTCEEEEEEEEC-SCHHHHTTHHHHH T ss_pred CCCEEEEECCCHHHCCCCCCCC---CCCC----CE---E--ECCCHHHHHHHCCCCCCEEEEEEEC-CHHHHHHHHHHHH T ss_conf 9898999828831157898677---8999----68---6--4472677664113586226777725-6389999999975 Q ss_pred CCCCCCEEEEEEEEE Q ss_conf 012343036431122 Q gi|254780570|r 78 LSSIQPDLICLAGYM 92 (205) Q Consensus 78 l~~~~~Dliv~~g~~ 92 (205) +. +.|++|+.|=. T Consensus 68 ~~--~~DlvIttGG~ 80 (144) T d1wu2a3 68 KN--ECDIVLITGGS 80 (144) T ss_dssp HH--CSEEEECC--- T ss_pred HH--CCCEEEECCCC T ss_conf 50--05689871664 No 92 >d1gc5a_ c.72.1.3 (A:) ADP-dependent glucokinase {Archaeon Thermococcus litoralis [TaxId: 2265]} Probab=22.97 E-value=17 Score=14.11 Aligned_cols=22 Identities=14% Similarity=0.277 Sum_probs=14.6 Q ss_pred HHHHHHHHCCCC--CCEEEEEEEE Q ss_conf 124321000123--4303643112 Q gi|254780570|r 70 HEKAILMQLSSI--QPDLICLAGY 91 (205) Q Consensus 70 ~~~~l~~~l~~~--~~Dliv~~g~ 91 (205) ..+.+.+.++++ +||++|+.|| T Consensus 219 ~~e~f~~~l~~~~~~~dl~vlSGl 242 (467) T d1gc5a_ 219 MRREFREGFEEITRNVELAIISGL 242 (467) T ss_dssp CCHHHHHSHHHHHTTCSEEEECCG T ss_pred CCHHHHHHHHHHCCCCCEEEEECH T ss_conf 559899999862658878999752 No 93 >d1o2da_ e.22.1.2 (A:) Alcohol dehydrogenase TM0920 {Thermotoga maritima [TaxId: 2336]} Probab=22.95 E-value=19 Score=13.70 Aligned_cols=86 Identities=9% Similarity=-0.009 Sum_probs=43.9 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEECCC---CCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHHH Q ss_conf 665999976985018999999973999847999997688---88788----89986089504630132332210124321 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNS---NAQGL----VKARKEKVPTFPIPYKDYISRREHEKAIL 75 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Visn~~---da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~ 75 (205) ..|+ +| |.|+ +..|-+..+. ++.++ +++++.. ..+.. +..++.+|.+.+++.-......+.=++.. T Consensus 7 P~~i-~f--G~g~-l~~l~~~~~~--~g~k~-liV~~~~~~~~~g~~~~v~~~L~~~~i~~~~f~~v~~~p~~~~v~~~~ 79 (359) T d1o2da_ 7 PTDV-FF--GEKI-LEKRGNIIDL--LGKRA-LVVTGKSSSKKNGSLDDLKKLLDETEISYEIFDEVEENPSFDNVMKAV 79 (359) T ss_dssp CCEE-EE--STTH-HHHHGGGGGG--TCSEE-EEEEESSGGGTSSHHHHHHHHHHHTTCEEEEEEEECSSCBHHHHHHHH T ss_pred CCEE-EE--ECCH-HHHHHHHHHH--CCCEE-EEEECCCHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCHHHHHHHH T ss_conf 9989-99--4899-9999999997--59958-999858688874099999999987698499975746897989998764 Q ss_pred HHCCCCCCEEEEEEEEEEEC Q ss_conf 00012343036431122205 Q gi|254780570|r 76 MQLSSIQPDLICLAGYMRLL 95 (205) Q Consensus 76 ~~l~~~~~Dliv~~g~~~il 95 (205) +.+++.++|+||-.|=+..+ T Consensus 80 ~~~~~~~~D~IIavGGGs~i 99 (359) T d1o2da_ 80 ERYRNDSFDFVVGLGGGSPM 99 (359) T ss_dssp HHHTTSCCSEEEEEESHHHH T ss_pred HHCCCCCCCEEEECCCCCCH T ss_conf 20013577568851664200 No 94 >d1dxha2 c.78.1.1 (A:151-335) Ornithine transcarbamoylase {Pseudomonas aeruginosa [TaxId: 287]} Probab=22.93 E-value=19 Score=13.69 Aligned_cols=101 Identities=9% Similarity=-0.031 Sum_probs=45.6 Q ss_pred CCEEEEEECCCCHHHHHHHHHHHCCCCCCEEEEEEE--CCCCCHHHHHHH----HCCCCEEEEECCCCCCCCCHHHHHHH Q ss_conf 665999976985018999999973999847999997--688887888998----60895046301323322101243210 Q gi|254780570|r 3 RKNIVIFISGEGTNMLSLIQATKKNDYPAEIVGVFS--DNSNAQGLVKAR----KEKVPTFPIPYKDYISRREHEKAILM 76 (205) Q Consensus 3 k~riavl~SG~Gsnl~~Il~~~~~~~~~~eI~~Vis--n~~da~~l~~a~----~~~Ip~~~i~~~~~~~~~~~~~~l~~ 76 (205) ..+||+.+-+.-.-+.+++..... +++++.++-- -.++...++.++ +.+......+. +.+ T Consensus 5 ~lkia~vGD~~nnV~~Sli~~~~~--~G~~l~l~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~d------------~~e 70 (185) T d1dxha2 5 DISYAYLGDARNNMGNSLLLIGAK--LGMDVRIAAPKALWPHDEFVAQCKKFAEESGAKLTLTED------------PKE 70 (185) T ss_dssp GCEEEEESCCSSHHHHHHHHHHHH--TTCEEEEECCGGGSCCHHHHHHHHHHHHHHTCEEEEESC------------HHH T ss_pred CCEEEEECCCCCHHHHHHHHHHHH--CCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEEEC------------HHH T ss_conf 888999867845599999999998--599799986679875137899998876415881899967------------465 Q ss_pred HCCCCCCEEEEEEEE--EE-----------------ECCCHHHHCCCCCEEECCCCCCCCCCCC Q ss_conf 001234303643112--22-----------------0572132106654231353223332444 Q gi|254780570|r 77 QLSSIQPDLICLAGY--MR-----------------LLSRDFVESYKNKILNIHPSLLPLFPGL 121 (205) Q Consensus 77 ~l~~~~~Dliv~~g~--~~-----------------il~~~~l~~~~~~~iN~HpslLP~yrG~ 121 (205) .++ +.|+|..-.| ++ +..+.+....+..++=+|| ||.+||. T Consensus 71 ai~--~aDvVyt~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ak~~~i~MH~--LPa~r~~ 130 (185) T d1dxha2 71 AVK--GVDFVHTDVWVSMGEPVEAWGERIKELLPYQVNMEIMKATGNPRAKFMHC--LPAFHNS 130 (185) T ss_dssp HTT--TCSEEEECCCSCSSSCGGGCHHHHHHHGGGCBCHHHHHTTCCSSCEEEEC--SCCCCSS T ss_pred CCC--CCCEEEEEHHHHHHHHHHHHHHHHHHHHHHEECCHHHHHHCCCCEEEECC--CCHHCCC T ss_conf 023--14589722111254322467788887541120227778635997799718--7110242 No 95 >d2piaa2 c.25.1.2 (A:104-223) Phthalate dioxygenase reductase {Pseudomonas cepacia, db01 [TaxId: 292]} Probab=22.79 E-value=19 Score=13.68 Aligned_cols=38 Identities=18% Similarity=0.288 Sum_probs=25.4 Q ss_pred CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 665999976985-018999999973999847999997688 Q gi|254780570|r 3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) .++++++++|.| +-+.++++...... ...+.++.+++. T Consensus 8 ~~~~v~IagGtGiaP~~s~~~~l~~~~-~~~~~l~~~~r~ 46 (120) T d2piaa2 8 AKSFILVAGGIGITPMLSMARQLRAEG-LRSFRLYYLTRD 46 (120) T ss_dssp CSEEEEEEEGGGHHHHHHHHHHHHHHC-SSEEEEEEEESC T ss_pred CCCEEEEEECCCHHHHHHHHHHHHHHC-CCCEEEEEEECC T ss_conf 887899983606788999999999846-998499996177 No 96 >d1iiba_ c.44.2.1 (A:) Enzyme IIB-cellobiose {Escherichia coli [TaxId: 562]} Probab=22.45 E-value=19 Score=13.63 Aligned_cols=32 Identities=22% Similarity=0.321 Sum_probs=16.4 Q ss_pred CCEEEEEECCCCH-H--HHHHHHHHHCCCCCCEEE Q ss_conf 6659999769850-1--899999997399984799 Q gi|254780570|r 3 RKNIVIFISGEGT-N--MLSLIQATKKNDYPAEIV 34 (205) Q Consensus 3 k~riavl~SG~Gs-n--l~~Il~~~~~~~~~~eI~ 34 (205) ||||.+++||+.| + ++.+-++....+.+++|. T Consensus 1 kk~IlL~C~~G~STs~l~~km~~~a~~~~~~~~i~ 35 (103) T d1iiba_ 1 KKHIYLFSSAGMSTSLLVSKMRAQAEKYEVPVIIE 35 (103) T ss_dssp CEEEEEEESCHHHHHHHHHHHHHHHHHTTCCEEEE T ss_pred CCEEEEECCCCCCHHHHHHHHHHHHHHCCCCEEEE T ss_conf 97899988998549999999999999869978999 No 97 >d1uxja1 c.2.1.5 (A:2-143) Malate dehydrogenase {Chloroflexus aurantiacus [TaxId: 1108]} Probab=22.29 E-value=20 Score=13.61 Aligned_cols=30 Identities=27% Similarity=0.397 Sum_probs=17.6 Q ss_pred CCEEEEEECCC-CHHHHHHHHHHHCCCCCCEEEEE Q ss_conf 66599997698-50189999999739998479999 Q gi|254780570|r 3 RKNIVIFISGE-GTNMLSLIQATKKNDYPAEIVGV 36 (205) Q Consensus 3 k~riavl~SG~-Gsnl~~Il~~~~~~~~~~eI~~V 36 (205) |+||+|..+|+ |+++-.++. .+.+ .++.++ T Consensus 1 r~KI~IIGaG~VG~~~A~~l~---~~~l-~dl~l~ 31 (142) T d1uxja1 1 RKKISIIGAGFVGSTTAHWLA---AKEL-GDIVLL 31 (142) T ss_dssp CCEEEEECCSHHHHHHHHHHH---HHTC-SEEEEE T ss_pred CCEEEEECCCHHHHHHHHHHH---HCCC-CEEEEE T ss_conf 986999897989999999998---4783-508988 No 98 >d2qy9a2 c.37.1.10 (A:285-495) GTPase domain of the signal recognition particle receptor FtsY {Escherichia coli [TaxId: 562]} Probab=22.07 E-value=20 Score=13.58 Aligned_cols=142 Identities=15% Similarity=0.262 Sum_probs=67.5 Q ss_pred CEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEECCCCCCCCCHHHHHH Q ss_conf 65999976--985--01899999997399984799999768888788----89986089504630132332210124321 Q gi|254780570|r 4 KNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPYKDYISRREHEKAIL 75 (205) Q Consensus 4 ~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~~~~~~~~~~~~~l~ 75 (205) +.+..|+- |.| |.+-.|-.+.... +..|.+|-+|.-...+. .+|+..++|++..+... +....+. T Consensus 9 p~vi~lvGptGvGKTTTiAKLA~~~~~~--g~kV~lit~Dt~R~gA~eQL~~~a~~l~v~~~~~~~~~-----d~~~~l~ 81 (211) T d2qy9a2 9 PFVILMVGVNGVGKTTTIGKLARQFEQQ--GKSVMLAAGDTFRAAAVEQLQVWGQRNNIPVIAQHTGA-----DSASVIF 81 (211) T ss_dssp TEEEEEECCTTSCHHHHHHHHHHHHHTT--TCCEEEECCCTTCHHHHHHHHHHHHHTTCCEECCSTTC-----CHHHHHH T ss_pred CEEEEEECCCCCCHHHHHHHHHHHHHHC--CCCEEEEECCCCCCCCHHHHHHHHHHCCCCCCCCCCCC-----CHHHHHH T ss_conf 9799998999999899999999999977--99479982321366612045554343388621135687-----7999999 Q ss_pred HH---CCCCCCEEEE--EEEEEEECCCHHHHCCCC--CEEE-------CCCCC-CCCCCCCCCCCCHHC--CCCCCCCCC Q ss_conf 00---0123430364--311222057213210665--4231-------35322-333244421210000--246534453 Q gi|254780570|r 76 MQ---LSSIQPDLIC--LAGYMRLLSRDFVESYKN--KILN-------IHPSL-LPLFPGLHTHRRVLQ--SGIKITGCT 138 (205) Q Consensus 76 ~~---l~~~~~Dliv--~~g~~~il~~~~l~~~~~--~~iN-------~Hpsl-LP~yrG~~~~~~ai~--~g~~~~G~T 138 (205) +. .+..+.|+|+ .+|.++.=. +.++..+. .+++ .++-| |+..-|......+.. +.....|+- T Consensus 82 ~~~~~a~~~~~d~ilIDTaGr~~~d~-~~~~el~~l~~~~~~~~~~~p~~~~LVl~a~~~~~~~~~~~~~~~~~~~~~lI 160 (211) T d2qy9a2 82 DAIQAAKARNIDVLIADTAGRLQNKS-HLMEELKKIVRVMKKLDVEAPHEVMLTIDASTGQNAVSQAKLFHEAVGLTGIT 160 (211) T ss_dssp HHHHHHHHTTCSEEEECCCCCGGGHH-HHHHHHHHHHHHHTTTCTTCCSEEEEEEEGGGTHHHHHHHHHHHHHSCCCEEE T ss_pred HHHHHHHHCCCCEEEECCCCCCCCCH-HHHHHHHHHHHHHHHHCCCCCCEEEEEHHCCCCCCHHHHHHHHHHCCCCCEEE T ss_conf 99999987699889965688763207-78999999999985304668600122001235763377876442101786489 Q ss_pred EEEECCCCCCCCEEE Q ss_conf 033123218662677 Q gi|254780570|r 139 VHMVTANMDEGPIIA 153 (205) Q Consensus 139 iH~v~~~~D~G~Ii~ 153 (205) +-++|+.---|.++. T Consensus 161 lTKlDe~~~~G~~l~ 175 (211) T d2qy9a2 161 LTKLDGTAKGGVIFS 175 (211) T ss_dssp EECCTTCTTTTHHHH T ss_pred EEECCCCCCCCHHHH T ss_conf 961278887209999 No 99 >d1p3y1_ c.34.1.1 (1:) MrsD {Bacillus sp. hil-y85/54728 [TaxId: 69002]} Probab=21.30 E-value=20 Score=13.48 Aligned_cols=36 Identities=25% Similarity=0.268 Sum_probs=23.8 Q ss_pred CCEEEEEECCCCH--HHHHHHHHHHCCCCCCEEEEEEECC Q ss_conf 6659999769850--1899999997399984799999768 Q gi|254780570|r 3 RKNIVIFISGEGT--NMLSLIQATKKNDYPAEIVGVFSDN 40 (205) Q Consensus 3 k~riavl~SG~Gs--nl~~Il~~~~~~~~~~eI~~Visn~ 40 (205) .|||++.+||+-. .+..+++..+. ...+|.+|.|.. T Consensus 6 ~KkIllgvTGsiaa~k~~~l~~~L~~--~g~eV~vv~T~~ 43 (183) T d1p3y1_ 6 DKKLLIGICGSISSVGISSYLLYFKS--FFKEIRVVMTKT 43 (183) T ss_dssp GCEEEEEECSCGGGGGTHHHHHHHTT--TSSEEEEEECHH T ss_pred CCEEEEEEECHHHHHHHHHHHHHHHH--CCCEEEEEEECC T ss_conf 98799998088999999999999998--899399999724 No 100 >d1js1x2 c.78.1.1 (X:164-324) Transcarbamylase-like protein {Bacteroides fragilis [TaxId: 817]} Probab=21.05 E-value=19 Score=13.71 Aligned_cols=25 Identities=12% Similarity=0.162 Sum_probs=15.3 Q ss_pred ECCCHHHHCCCCCEEECCCCCCCCCCCC Q ss_conf 0572132106654231353223332444 Q gi|254780570|r 94 LLSRDFVESYKNKILNIHPSLLPLFPGL 121 (205) Q Consensus 94 il~~~~l~~~~~~~iN~HpslLP~yrG~ 121 (205) .....+.+..+ .+|=+|| ||.+||. T Consensus 94 ~~~~~l~~~~~-dai~MHc--lPa~Rg~ 118 (161) T d1js1x2 94 TVGDRQMAVTN-NAYFMHC--LPVRRNM 118 (161) T ss_dssp SBCHHHHTTSS-SCEEECC--SCCCBTT T ss_pred HHHHHHHHCCC-CEEECCC--CCCCCCH T ss_conf 45677763377-6177278--7655103 No 101 >d1j8yf2 c.37.1.10 (F:87-297) GTPase domain of the signal sequence recognition protein Ffh {Archaeon Acidianus ambivalens [TaxId: 2283]} Probab=21.02 E-value=21 Score=13.44 Aligned_cols=57 Identities=21% Similarity=0.213 Sum_probs=33.4 Q ss_pred CCEEEEEEC--CCC--HHHHHHHHHHHCCCCCCEEEEEEECCCCCHHH----HHHHHCCCCEEEEEC Q ss_conf 665999976--985--01899999997399984799999768888788----899860895046301 Q gi|254780570|r 3 RKNIVIFIS--GEG--TNMLSLIQATKKNDYPAEIVGVFSDNSNAQGL----VKARKEKVPTFPIPY 61 (205) Q Consensus 3 k~riavl~S--G~G--snl~~Il~~~~~~~~~~eI~~Visn~~da~~l----~~a~~~~Ip~~~i~~ 61 (205) ++.+..|+. |.| |.+-.|-.+.+... ..|.+|-+|.--.++. .+|+..|+|++..+. T Consensus 11 ~p~vi~lvGptGvGKTTTiAKLA~~~~~~g--~kV~lit~Dt~R~ga~eQL~~~a~~l~v~~~~~~~ 75 (211) T d1j8yf2 11 IPYVIMLVGVQGTGKATTAGKLAYFYKKKG--FKVGLVGADVYRPAALEQLQQLGQQIGVPVYGEPG 75 (211) T ss_dssp SSEEEEEECSCCC----HHHHHHHHHHHTT--CCEEEEECCCSSHHHHHHHHHHHHHHTCCEECCTT T ss_pred CCEEEEEECCCCCCHHHHHHHHHHHHHHCC--CCEEEEEEECCCCCHHHHHHHHCCCCCCCEEECCC T ss_conf 998999989999998999999999999779--93699972023551567898740146842230244 No 102 >d2b8na1 c.118.1.1 (A:4-417) Putative glycerate kinase (hypothetical protein TM1585) {Thermotoga maritima [TaxId: 2336]} Probab=20.96 E-value=19 Score=13.71 Aligned_cols=12 Identities=25% Similarity=0.783 Sum_probs=7.7 Q ss_pred EEEEEECCCCHH Q ss_conf 599997698501 Q gi|254780570|r 5 NIVIFISGEGTN 16 (205) Q Consensus 5 riavl~SG~Gsn 16 (205) .+.+|+||.||. T Consensus 113 lvl~LISGGgSA 124 (414) T d2b8na1 113 TVLFLLSGGGSS 124 (414) T ss_dssp EEEEEECTTHHH T ss_pred EEEEEEECCCCC T ss_conf 689985088540 No 103 >d2fywa1 c.135.1.1 (A:1-265) Hypothetical protein SP1609 {Streptococcus pneumoniae [TaxId: 1313]} Probab=20.96 E-value=21 Score=13.43 Aligned_cols=38 Identities=11% Similarity=0.086 Sum_probs=20.2 Q ss_pred HHHHHHHHHCCCCCCEEEEEEECCCC--------------CHHHHHHHHCCCCEEEE Q ss_conf 89999999739998479999976888--------------87888998608950463 Q gi|254780570|r 17 MLSLIQATKKNDYPAEIVGVFSDNSN--------------AQGLVKARKEKVPTFPI 59 (205) Q Consensus 17 l~~Il~~~~~~~~~~eI~~Visn~~d--------------a~~l~~a~~~~Ip~~~i 59 (205) .+.|-+|...+ . .++||-+|- ...+..+.+++|..+.. T Consensus 47 ~~vi~~Ai~~~-a----dlIItHHp~~f~~~~~~~~~~~~~~~~~~lik~~I~vy~~ 98 (265) T d2fywa1 47 EETVAEAIEKG-V----DLIIVKHAPIFRPIKDLLASRPQNQIYIDLIKHDIAVYVS 98 (265) T ss_dssp HHHHHHHHHTT-C----SEEEESSCSCCSCCCCCCTTSHHHHHHHHHHHTTCEEEEC T ss_pred HHHHHHHHHCC-C----CEEEECCCCCEECCCCCCCCCHHHHHHHHHHHCCCEEEEE T ss_conf 99999999769-9----9899627851322223357871789999998689708980 No 104 >d1tuga1 c.78.1.1 (A:1-150,A:151-310) Aspartate carbamoyltransferase catalytic subunit {Escherichia coli [TaxId: 562]} Probab=20.65 E-value=21 Score=13.39 Aligned_cols=20 Identities=30% Similarity=0.501 Sum_probs=11.1 Q ss_pred CCCHHHHCCCCCEEECCCCCCC Q ss_conf 5721321066542313532233 Q gi|254780570|r 95 LSRDFVESYKNKILNIHPSLLP 116 (205) Q Consensus 95 l~~~~l~~~~~~~iN~HpslLP 116 (205) +..++++..+..++=+|| || T Consensus 249 v~~~~l~~a~~~~i~MHc--LP 268 (310) T d1tuga1 249 LRASDLHNAKANMKVLHP--LP 268 (310) T ss_dssp BCGGGGTTSCSSCEEECC--SC T ss_pred HHHHHHHCCCCCCEEEEC--CC T ss_conf 009999537999599528--99 No 105 >d1ep3b2 c.25.1.3 (B:103-262) Dihydroorotate dehydrogenase B, PyrK subunit {Lactococcus lactis, isozyme B [TaxId: 1358]} Probab=20.53 E-value=21 Score=13.37 Aligned_cols=37 Identities=19% Similarity=0.276 Sum_probs=24.6 Q ss_pred CCEEEEEECCCC-HHHHHHHHHHHCCCCCCEEEEEEECCC Q ss_conf 665999976985-018999999973999847999997688 Q gi|254780570|r 3 RKNIVIFISGEG-TNMLSLIQATKKNDYPAEIVGVFSDNS 41 (205) Q Consensus 3 k~riavl~SG~G-snl~~Il~~~~~~~~~~eI~~Visn~~ 41 (205) +.|+++++.|.| +-+.+++++..+.. .++.++...+. T Consensus 8 ~~kvllIAgG~GitPl~sm~~~l~~~~--~~v~l~~g~r~ 45 (160) T d1ep3b2 8 TDKILIIGGGIGVPPLYELAKQLEKTG--CQMTILLGFAS 45 (160) T ss_dssp TSEEEEEEEGGGSHHHHHHHHHHHHHT--CEEEEEEEESS T ss_pred CCEEEEEEEEEEHHHHHHHHHHHHHCC--CCEEEEEECCC T ss_conf 997999971044999999999998645--85589996389 No 106 >d2ffea1 c.143.1.1 (A:1-309) LPPG:FO 2-phospho-L-lactate transferase CofD {Methanosarcina mazei [TaxId: 2209]} Probab=20.22 E-value=22 Score=13.33 Aligned_cols=27 Identities=22% Similarity=0.183 Sum_probs=12.4 Q ss_pred CCCHHHHHHHHHHHCCCCCCEEEEEEE Q ss_conf 985018999999973999847999997 Q gi|254780570|r 12 GEGTNMLSLIQATKKNDYPAEIVGVFS 38 (205) Q Consensus 12 G~Gsnl~~Il~~~~~~~~~~eI~~Vis 38 (205) |+||.+..++...+.-..+.+++.|+| T Consensus 5 gGGtGl~~ll~glk~~~~~~~lt~IVt 31 (309) T d2ffea1 5 SGGTGTPKLLDGLKEILPEEELTVVVN 31 (309) T ss_dssp ECTTTHHHHHHHHTTTSCGGGCEEEEC T ss_pred CCCCCHHHHHHHHHHHCCCCCEEEEEE T ss_conf 465118999999986178887699998 No 107 >d2djia3 c.36.1.9 (A:364-592) Pyruvate oxidase {Aerococcus viridans [TaxId: 1377]} Probab=20.12 E-value=17 Score=14.03 Aligned_cols=12 Identities=17% Similarity=0.390 Sum_probs=5.2 Q ss_pred HHHHHHCCCCEE Q ss_conf 889986089504 Q gi|254780570|r 46 LVKARKEKVPTF 57 (205) Q Consensus 46 l~~a~~~~Ip~~ 57 (205) +.-|.++++|.. T Consensus 89 L~ta~~~~lpi~ 100 (229) T d2djia3 89 VVTNVRYNMPVI 100 (229) T ss_dssp HHHHHHTTCCCE T ss_pred HHHHHCCCCCCE T ss_conf 555402367720 Done!