RPSBLAST alignment for GI: 254780570 and conserved domain: TIGR00460
>gnl|CDD|161888 TIGR00460, fmt, methionyl-tRNA formyltransferase. The top-scoring characterized proteins other than methionyl-tRNA formyltransferase (fmt) itself are formyltetrahydrofolate dehydrogenases. The mitochondrial methionyl-tRNA formyltransferases are so divergent that, in a multiple alignment of bacterial fmt, mitochondrial fmt, and formyltetrahydrofolate dehydrogenases, the mitochondrial fmt appears the most different. However, because both bacterial and mitochondrial fmt are included in the seed alignment, all credible fmt sequences score higher than any non-fmt sequence. This enzyme modifies Met on initiator tRNA to f-Met. Length = 313
Score = 85.5 bits (212), Expect = 9e-18
Identities = 48/183 (26%), Positives = 90/183 (49%), Gaps = 19/183 (10%)
Query: 8 IFISGEGTNMLSLIQATKKNDYPAEIVGVFSDNSNAQGLVKARKEKV---PTF------P 58
I G T L +++ +++++ E+VGV + R +K+ P
Sbjct: 3 IVFFGTPTFSLPVLEELREDNF--EVVGVVTQPD----KPAGRGKKLTPPPVKVLAEEKG 56
Query: 59 IPYKDYISRREHEKAILMQLSSIQPDLICLAGYMRLLSRDFVESYKNKILNIHPSLLPLF 118
IP +R+ E L + ++PD+I + + ++L ++F++ + +N+HPSLLP +
Sbjct: 57 IPVFQPEKQRQLE--ELPLVRELKPDVIVVVSFGKILPKEFLDLFPYGCINVHPSLLPRW 114
Query: 119 PGLHTHRRVLQSGIKITGCTVHMVTANMDEGPIIAQAAVPVSSQDTESSLSQKV--LSAE 176
G +R + +G K TG T+ + MD G I+ Q P+ +D +LS K+ L A+
Sbjct: 115 RGGAPIQRAILNGDKKTGVTIMQMVPKMDAGDILKQETFPIEEEDNSGTLSDKLSELGAQ 174
Query: 177 HLL 179
L+
Sbjct: 175 LLI 177