HHsearch alignment for GI: 254780572 and conserved domain: pfam07811
>pfam07811 TadE TadE-like protein. The members of this family are similar to a region of the protein product of the bacterial tadE locus. In various bacterial species, the tad locus is closely linked to flp-like genes, which encode proteins required for the production of pili involved in adherence to surfaces. It is thought that the tad loci encode proteins that act to assemble or export an Flp pilus in various bacteria. All tad loci but TadA have putative transmembrane regions, and in fact the region in question is this family has a high proportion of hydrophobic amino acid residues.
Probab=99.26 E-value=9.4e-12 Score=77.07 Aligned_cols=43 Identities=40% Similarity=0.657 Sum_probs=42.2
Q ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q ss_conf 6459999999999999999999999999999999999999988
Q gi|254780572|r 18 GAVAIEFAILVMPYFMLVFAILEISLSFTAGQLFESAAYDVAR 60 (192)
Q Consensus 18 G~aaVEFAlv~p~ll~l~~g~~E~g~~~~~~~~l~~A~~~aaR 60 (192)
T Consensus 1 G~a~VEfalv~p~~l~l~~~~~~~~~~~~~~~~~~~Aa~~aaR 43 (43)
T pfam07811 1 GAAAVEFALVLPVLLLLLFGIVELGRLFYARQVLQNAAREAAR 43 (43)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
T ss_conf 9169999999999999999999999999999999999986749