HHsearch alignment for GI: 254780573 and conserved domain: COG0495
>COG0495 LeuS Leucyl-tRNA synthetase [Translation, ribosomal structure and biogenesis].
Probab=99.41 E-value=6.8e-13 Score=112.53 Aligned_cols=140 Identities=21% Similarity=0.213 Sum_probs=104.0
Q ss_pred CEEEEEECCCCCCCCCHHHHHHHHHHCCC------CCCHHHEECCCEEEE-EECCCCCCCCCCCCHHHHHCCCCCCCCCC
Q ss_conf 41487413566668751366888864087------530121003432576-42022332332140899850253345577
Q gi|254780573|r 230 VFDIHGGGLDLIFPHHENEIAQSCCADRI------EKTANIWIHNGFLNL-EGRKMSKSNGNFITINELLETKKFGGRSW 302 (461)
Q Consensus 230 ~~DIH~GG~DL~FPHHENEiAQs~a~~~~------~~~a~yWlH~G~l~i-~geKMSKSlGN~iti~dlL~~~~~~~k~y 302 (461)
T Consensus 526 PVD~yigG~ehavlHLly~rF~hkal~d~g~~p~~epf~~-L~~qGmVl~~~g~KMSKSKgN~v~p~~~i-------~~y 597 (814)
T COG0495 526 PVDLYIGGIEHAVLHLLYFRFFHKALFDEGLVPKDEPFKK-LITQGMVLGEEGEKMSKSKGNVVDPEEAV-------EKY 597 (814)
T ss_pred CHHEEECCHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHH-HHCCCEEEECCCCCCCCCCCCCCCHHHHH-------HHH
T ss_conf 7201226366777889999999988347577877650444-41142687427770454457888989999-------995
Q ss_pred CHHHHHHHHH-CCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-----CC-C----------HHHHHHCCCHHHH----
Q ss_conf 7999999984-256643211450346877764321000013510-----05-9----------6776302110127----
Q gi|254780573|r 303 PAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----II-D----------PAVLSALYNDLNT---- 361 (461)
Q Consensus 303 ~p~viR~~lL-sshYRspLdfS~e~L~~A~~~l~kl~~~~~~~~-----~~-~----------~~f~~AL~DDLNT---- 361 (461)
T Consensus 598 GADt~Rl~~m~~ap~~~d~~W~e~gv~g~~rfL~r~~~l~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~v~~~~e~~~~~ 677 (814)
T COG0495 598 GADTVRLYIMFAAPPEQDLEWSESGVEGARRFLQRVWNLVKEHLEKLVEELTKEQGKEDRWLLHRTIKKVTEDFEARQTF 677 (814)
T ss_pred CCHHHHHHHHHHCCHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_conf 84098999986087753788774564899999999999999864023333553056889999999999999999999889
Q ss_pred HHHHHHHHHHHHHHCC
Q ss_conf 9999999999997513
Q gi|254780573|r 362 VSAIQALHKLARESTK 377 (461)
Q Consensus 362 p~ALa~L~~lvk~~n~ 377 (461)
T Consensus 678 nt~i~~~m~l~N~l~~ 693 (814)
T COG0495 678 NTAIAALMELLNALRK 693 (814)
T ss_pred HHHHHHHHHHHHHHHH
T ss_conf 9999999999999999