HHsearch alignment for GI: 254780573 and conserved domain: PRK00133
>PRK00133 metG methionyl-tRNA synthetase; Reviewed.
Probab=100.00 E-value=5.5e-32 Score=248.95 Aligned_cols=332 Identities=22% Similarity=0.284 Sum_probs=219.8
Q ss_pred EEEEECCCCC--CCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCC-CHHHHHHHHHCCCCCCCCCCHHHHHHHH
Q ss_conf 9996167888--844411127999999999999970799845799605523-3888999987089864488489999999
Q gi|254780573|r 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPINDAISIITSKN 103 (461)
Q Consensus 27 ~~Y~CGpTvy--~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDi-dDkii~~a~~~~~~~~~~~~~~~~a~~~ 103 (461)
T Consensus 3 ~~~iTt~ipY~Ng~~HiGH~~~~i~aDv~aRy~Rl~G~~--v~f~~G-tDeHG~~i~~~A~~~g~t------p~e~~d~~ 73 (666)
T PRK00133 3 KILVTCALPYANGPIHLGHLLEYIQADIWVRYQRMRGHE--VLFVCA-DDAHGTPIMLKAEKEGIT------PEELIARY 73 (666)
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCC--EEEECC-CCCCCHHHHHHHHHCCCC------HHHHHHHH
T ss_conf 779817987888984312467699999999999836995--498474-278848999999985999------99999999
Q ss_pred HHHHHHHHHHHCCCCCCHHHHHHH--HHHHHHHHHHHHHHCCCCCCCCCCEEECCHH--C----------------CCCC
Q ss_conf 999999877626854100012356--7777899999874114320128928752200--2----------------4543
Q gi|254780573|r 104 TQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFDTSS--I----------------PNYG 163 (461)
Q Consensus 104 ~~~f~~d~~~L~v~~p~~~pr~t~--~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~--~----------------~~YG 163 (461)
T Consensus 74 ~~~~~~~~~~l~Is~-D~f~rTt~~~h~~~vq~~f~~l~~~G~iy~~~~~~~Yc~~~e~fl~Dr~V~GtCP~C~~~~~~G 152 (666)
T PRK00133 74 HAEHKRDFAGFGISF-DNYGSTHSEENRELAQEIYLKLKENGYIYERTIEQLYDPEKGMFLPDRFVKGTCPKCGAEDQYG 152 (666)
T ss_pred HHHHHHHHHHCCCCC-CCCCCCCCHHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCEEEEECCCCCCHHHCC
T ss_conf 999999999839957-8785789889999999999999978998974035556687565525423420257778712048
Q ss_pred CC---CCCCH--HHHH------HHHHCCCCC------------------CCCCC-----CCEEE-EECC--CCCCCEEEC
Q ss_conf 22---46754--6666------432102222------------------10123-----51266-6337--766631414
Q gi|254780573|r 164 SF---SRRKI--DEQK------MGTRVPEKY------------------HKKNP-----ADFIL-WKRS--TPMEPGWES 206 (461)
Q Consensus 164 ~L---s~~~~--~~~~------~g~r~~~~~------------------~K~~p-----~DFaL-WK~~--~~~e~~w~s 206 (461)
T Consensus 153 D~Ce~cG~~~~p~eL~~p~~~~~g~~~e~~~~e~~ff~Ls~~~~~L~~~~~~~~~~~~~~n~~~~~l~~gL~D~~ISR~~ 232 (666)
T PRK00133 153 DNCEVCGATYSPTELINPKSAISGATPVLKESEHFFFKLPDFEEFLKEWTRSGALQPNVANKMKEWLEEGLQDWDISRDA 232 (666)
T ss_pred CCCCCCCCCCCCHHHCCCCCCCCCCCCEEECCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCCCEEEEC
T ss_conf 74224565167344238643457985166035333313877778998751048898789999999985788775304027
Q ss_pred CC-CCCCCC--------CC------CHHHHHHHHHCCCC------EE-----EEEECCCCCCCCCHH-HHHHHHHHCCCC
Q ss_conf 67-766764--------33------20477778752984------14-----874135666687513-668888640875
Q gi|254780573|r 207 PW-GRGRPG--------WH------IECSAMSSHYLGKV------FD-----IHGGGLDLIFPHHEN-EIAQSCCADRIE 259 (461)
Q Consensus 207 pw-G~GRPG--------WH------iECsam~~~~lg~~------~D-----IH~GG~DL~FPHHEN-EiAQs~a~~~~~ 259 (461)
T Consensus 233 ~W~GipvP~~~~kv~YVW~DA~igYis~t~~~~~~~~~~~~~~W~~d~~~~~vhfiGKDii~-FH~i~wPa~L~~~g-~~ 310 (666)
T PRK00133 233 PYFGFEIPGAPGKVFYVWLDAPIGYISSTKNLCDKRGLDWDEYWKKDSDTELYHFIGKDIIY-FHTLFWPAMLEGAG-YR 310 (666)
T ss_pred CCCCEECCCCCCEEEEEEECCCHHHHHHHHHHCCCCCCCHHHCCCCCCCCCEEEECCCCHHH-HHHHHHHHHHHHCC-CC
T ss_conf 84445888987648999615645377764433143565587638899876336753443114-64767999998467-78
Q ss_pred CCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC-CCC-CCCCCCHHHHHHHHH-----
Q ss_conf 3012100343257642022332332140899850253345577799999998425-664-321145034687776-----
Q gi|254780573|r 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYR-EPIDFTVQRLTEAEI----- 332 (461)
Q Consensus 260 ~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLss-hYR-spLdfS~e~L~~A~~----- 332 (461)
T Consensus 311 lP~~v~~h-g~l~~~G~KmSKS~Gnvv~p~~~l-------~~yg~D~lRY~l~~~~p~~~~D~dfs~~~~~~r~NsdLan 382 (666)
T PRK00133 311 LPTNVFAH-GFLTVEGAKMSKSRGTFIWARTYL-------DHLDPDYLRYYLAAKLPSRIDDIDFNWEDFQQRVNSDLVG 382 (666)
T ss_pred CCCCCCCC-CCEEECCEEEECCCCEEEEHHHHH-------HHCCCCCEEHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHH
T ss_conf 88612114-648778806001267176179999-------8669645302033107898767786999999998688887
Q ss_pred ----HHHHCCCCC-------CCCCCCCHHHH----------HHCCCHHHHHHHHHHHHHHHHHHCCC
Q ss_conf ----432100001-------35100596776----------30211012799999999999975130
Q gi|254780573|r 333 ----LLSKWPQTS-------TSKGIIDPAVL----------SALYNDLNTVSAIQALHKLARESTKN 378 (461)
Q Consensus 333 ----~l~kl~~~~-------~~~~~~~~~f~----------~AL~DDLNTp~ALa~L~~lvk~~n~~ 378 (461)
T Consensus 383 ~lGNl~~R~~~~~~k~~~g~vp~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~Al~~i~~l~~~~NkY 449 (666)
T PRK00133 383 KLVNFASRAAGFINKRFDGKLPDELADPELLEEFRAAAESIAEAYEAREFRKALREIMALADRANKY 449 (666)
T ss_pred HHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHH
T ss_conf 6668999999999986599789974589999999999999999998106999999999999999888