HHsearch alignment for GI: 254780573 and conserved domain: PRK00750
>PRK00750 lysK lysyl-tRNA synthetase; Reviewed.
Probab=99.29 E-value=1.5e-09 Score=88.56 Aligned_cols=263 Identities=19% Similarity=0.201 Sum_probs=142.4
Q ss_pred EEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHH-CCCCCEEEEECCCCCCH--HH----HH-HHHHCC-------CCCC
Q ss_conf 9996167888844411127999999999999970-79984579960552338--88----99-998708-------9864
Q gi|254780573|r 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGEKCVTYVRNITDIDD--KI----IE-RARQEH-------PSIP 91 (461)
Q Consensus 27 ~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~-~~~~~V~~v~niTDidD--ki----i~-~a~~~~-------~~~~ 91 (461)
T Consensus 31 vv~~tG~~pSG~~HiG~~~Ev~~~~~V~~al~~~~g~~--~~~i~~~Dd~D~lRkvp~~~p~~e~~~~~lg~Pl~~iPdP 108 (513)
T PRK00750 31 VLFETGYGPSGLPHIGTFGEVARTTMVRRALRDLTGIK--TRLIYFSDDMDGLRKVPDNVPNQEMLAEHLGKPLTSVPDP 108 (513)
T ss_pred EEEECCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCC--EEEEEEECCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCC
T ss_conf 99936868998862304522666999999999845996--6899985177654346889998499998749966407998
Q ss_pred CCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHH---------HHHHHH---HHHHHHHCCCCCCCCCCEEECCHHC
Q ss_conf 4884899999999999998776268541000123567---------777899---9998741143201289287522002
Q gi|254780573|r 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---------IPQMIY---LIQNIILHGHAYEANNEIIFDTSSI 159 (461)
Q Consensus 92 ~~~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t~~---------i~~~i~---~i~~L~~~g~aY~~~g~VyFdv~~~ 159 (461)
T Consensus 109 ~g~-~~Sya~h~~~~~~~~l~~~gi~~-e~-~s~te~Y~sG~f~~~i~~~l~~~~~I~~Il~~~~~~~~~-~~~~P~~pi 184 (513)
T PRK00750 109 FGT-HESYAEHNNARLREFLDKFGFEY-EF-ISATECYKSGRFDEALLKALEKYDEIMAILLPTLGEERQ-ATYSPFLPI 184 (513)
T ss_pred CCC-CCCHHHHHHHHHHHHHHHCCCCE-EE-EEHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCC-CCEEEEEEE
T ss_conf 887-57699999999999999839833-99-767876644866999999998599999999984386667-871477876
Q ss_pred -CCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCCCEEECCC-CCCCCCCCCHHHHHHHHHCCCCEEEEEEC
Q ss_conf -4543224675466664321022221012351266633776663141467-76676433204777787529841487413
Q gi|254780573|r 160 -PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGG 237 (461)
Q Consensus 160 -~~YG~Ls~~~~~~~~~g~r~~~~~~K~~p~DFaLWK~~~~~e~~w~spw-G~GRPGWHiECsam~~~~lg~~~DIH~GG 237 (461)
T Consensus 185 C~~cGkv~~t~v~~~d------------~~~~~v~y~~-~cG~~~~~~~~~g~~KL~WrvDW-~mRW~~~~--Vd~Ep~G 248 (513)
T PRK00750 185 CPKCGKVLQVPVISVD------------ADAGTITYDD-ECGHEGEVPVTGGHVKLQWKVDW-PMRWAALG--VDFEPAG 248 (513)
T ss_pred CCCCCCEEEEEEEEEE------------CCCCEEEEEC-CCCCEEEECCCCCCCCCCCCCCC-HHHHHHHC--CCCCCCC
T ss_conf 1888955204689997------------7998899984-99987876366885434662565-54411106--4303465
Q ss_pred CCCCCCCCH--HHHHHHHHHCCCCCCHHHEECCCEE-EEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHH-HHHHHHHC
Q ss_conf 566668751--3668888640875301210034325-7642022332332140899850253345577799-99999842
Q gi|254780573|r 238 LDLIFPHHE--NEIAQSCCADRIEKTANIWIHNGFL-NLEGRKMSKSNGNFITINELLETKKFGGRSWPAP-VIRLAMLM 313 (461)
Q Consensus 238 ~DL~FPHHE--NEiAQs~a~~~~~~~a~yWlH~G~l-~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~-viR~~lLs 313 (461)
T Consensus 249 KDh~~-S~~~~~~I~--~i~g~-~pP~~--~~YE~fLd~~G~KmSsSkGngit~~ewL-------~~~~PEsl~rfm~~~ 315 (513)
T PRK00750 249 KDHIS-SYDTSSRIC--EILGG-EPPEG--FMYELFLDGKGQKISKSKGNGISIEDWL-------EYAPPESLARFMYAR 315 (513)
T ss_pred CCCCC-CHHHHHHHH--HHHCC-CCCCC--CCEEEEECCCCCEECCCCCCCCCHHHHH-------HHCCHHHHHHHHHHC
T ss_conf 11212-076799999--98389-99999--8722798379866305689723899999-------755999999999718
Q ss_pred CCCCCCCCCCH
Q ss_conf 56643211450
Q gi|254780573|r 314 THYREPIDFTV 324 (461)
Q Consensus 314 shYRspLdfS~ 324 (461)
T Consensus 316 pkpaK~l~fd~ 326 (513)
T PRK00750 316 PKPAKRLYFDV 326 (513)
T ss_pred CCCCCCCCHHH
T ss_conf 89884015656