HHsearch alignment for GI: 254780573 and conserved domain: PRK04156
>PRK04156 gltX glutamyl-tRNA synthetase; Provisional.
Probab=99.24 E-value=1.3e-09 Score=89.13 Aligned_cols=273 Identities=18% Similarity=0.223 Sum_probs=167.6
Q ss_pred EEEEC---CCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCC
Q ss_conf 23304---798479996167888844411127999999999999970799845799605523388899998708986448
Q gi|254780573|r 17 EFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIN 93 (461)
Q Consensus 17 ~f~p~---~~~~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~ 93 (461)
T Consensus 89 ~lp~l~~~~~gkV~tRF-aP~P~G~LHiGhar~al~N~~~Ak~---~~G----~~iLR~eDTdp~~-~r----------- 148 (566)
T PRK04156 89 ELPPLLPNVKGKVVMRF-APNPSGPLHLGHARAAILNDEYAKR---YGG----KFILRFEDTDPRT-KR----------- 148 (566)
T ss_pred CCCCCCCCCCCEEEEEE-CCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCCCC-CC-----------
T ss_conf 79898866688389952-8699987618999999996999998---099----8999965888332-55-----------
Q ss_pred CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCC---CCCH
Q ss_conf 8489999999999999877626854100012356777789999987411432012892875220024543224---6754
Q gi|254780573|r 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS---RRKI 170 (461)
Q Consensus 94 ~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls---~~~~ 170 (461)
T Consensus 149 -----~~~e~~~~I~~dl~WLG~~~-de~~~qSdr~~~y~~~a~~Li~~G~AY~c~c~~e-e~~~~r~~~~~~p~R~~~~ 221 (566)
T PRK04156 149 -----PDPEAYDMIREDLKWLGVKP-DEVVIQSDRLEIYYEYARKLIEMGGAYVCTCDPE-EFKELKDKGEACPHRDQSP 221 (566)
T ss_pred -----CCHHHHHHHHHHHHHHCCCC-CCCEEHHHHHHHHHHHHHHHHHCCCEEECCCCHH-HHHHHHHCCCCCCCCCCCH
T ss_conf -----63789999999999829997-8016657619999999999998799277789999-9999986587687668997
Q ss_pred -------HHHHHHH--------HCCCCCCCC--CCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf -------6666432--------102222101--23512666337766631414677667643320477778752984148
Q gi|254780573|r 171 -------DEQKMGT--------RVPEKYHKK--NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233 (461)
Q Consensus 171 -------~~~~~g~--------r~~~~~~K~--~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DI 233 (461)
T Consensus 222 e~nl~~~~~m~~g~~~~g~~vlR~K~d~~~~n~~~rD~v~~Ri~~~~H~r~g~k~-~v~PtYdfa~~-idD~l~gITHvi 299 (566)
T PRK04156 222 EENLELWEKMLDGEYKEGEAVVRIKTDLNHPNPAVRDWVAFRIIDTPHPRTGDKY-RVWPLMNFAVA-VDDHLLGVTHVL 299 (566)
T ss_pred HHHHHHHHHHHCCCCCCCCEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC-CCCCCCCEEEE-EEHHHCCCCCEE
T ss_conf 8888899876514566787699997226789863223556785167776357754-44644240024-511104787156
Q ss_pred EEECCCCCCCCCHHHHHH---HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCC--------------
Q ss_conf 741356666875136688---886408753012100343257642022332332140899850253--------------
Q gi|254780573|r 234 HGGGLDLIFPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK-------------- 296 (461)
Q Consensus 234 H~GG~DL~FPHHENEiAQ---s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~-------------- 296 (461)
T Consensus 300 --Rg~e~----~~~t~~q~~ly~~lg~~~P---~~~~fgRln~~~~vlSKr-----kl~~lVe~g~v~GWDDPRlpTl~g 365 (566)
T PRK04156 300 --RGKDH----IVNTEKQRYIYKYFGWEYP---EYIHYGRLKIEGFVLSTS-----KIRKGIESGEYSGWDDPRLPTLRA 365 (566)
T ss_pred --ECCCC----CCCHHHHHHHHHHCCCCCC---EEEEEEEEECCCEEEEHH-----HHHHHHHCCCCCCCCCCCHHHHHH
T ss_conf --44301----1344778999997298775---057776775153131088-----999998629888887884277899
Q ss_pred CCCCCCCHHHHHHHHHCCCCC-CCCCCCHHHHHHHHH
Q ss_conf 345577799999998425664-321145034687776
Q gi|254780573|r 297 FGGRSWPAPVIRLAMLMTHYR-EPIDFTVQRLTEAEI 332 (461)
Q Consensus 297 ~~~k~y~p~viR~~lLsshYR-spLdfS~e~L~~A~~ 332 (461)
T Consensus 366 lrRRG~~peAir~f~~~iGvsk~d~~i~~~~L~a~nR 402 (566)
T PRK04156 366 LRRRGILPEAIRELIIEVGLKETDATISWENLYALNR 402 (566)
T ss_pred HHHCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHH
T ss_conf 9867999999999999968554453225999999999