HHsearch alignment for GI: 254780573 and conserved domain: PRK05347

>PRK05347 glutaminyl-tRNA synthetase; Provisional.
Probab=98.74  E-value=1.1e-06  Score=68.03  Aligned_cols=260  Identities=17%  Similarity=0.161  Sum_probs=147.6

Q ss_pred             ECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHH
Q ss_conf             16788884441112799999999999997079984579960552338889999870898644884899999999999998
Q gi|254780573|r   31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD  110 (461)
Q Consensus        31 CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d  110 (461)
T Consensus        34 FpPePnG~LHiGHaka~~lN~~~a~~--y-~G~----~~LRfDDTNP-------------------~~e~~e~~~~I~~d   87 (556)
T PRK05347         34 FPPEPNGYLHIGHAKSICLNFGLAQD--Y-GGK----CNLRFDDTNP-------------------EKEDQEYVDSIKED   87 (556)
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHHH--C-CCE----EEEEECCCCC-------------------CCCCHHHHHHHHHH
T ss_conf             49899987618888999866999997--0-998----9998358998-------------------74548999999999


Q ss_pred             HHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCE-EECCHH--CCCCCCCC---CCC-------HHHHHHHH
Q ss_conf             776268541000123567777899999874114320128928-752200--24543224---675-------46666432
Q gi|254780573|r  111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI-IFDTSS--IPNYGSFS---RRK-------IDEQKMGT  177 (461)
Q Consensus       111 ~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~V-yFdv~~--~~~YG~Ls---~~~-------~~~~~~g~  177 (461)
T Consensus        88 ~~wLg~~~~~~i~~~Sd~f~~~y~~a~~LI~~g~AYv~~~~~ee~~~~Rg~~~~~g~~sp~R~~~~eenl~lf~~M~~G~  167 (556)
T PRK05347         88 VRWLGFDWGGELRYASDYFDQLYEYAVELIKKGKAYVDDLSAEEIREYRGTLTEPGKNSPYRDRSVEENLDLFERMRAGE  167 (556)
T ss_pred             HHHCCCCCCCEEEEEHHHHHHHHHHHHHHHHCCCCEECCCCHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHHHHHCCC
T ss_conf             98749988982788134299999999999864881356899999998747776688879655699899999999986688


Q ss_pred             --------HCCCCCC--CCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCHH
Q ss_conf             --------1022221--012351266633776663141467766764332047777875298414874135666687513
Q gi|254780573|r  178 --------RVPEKYH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN  247 (461)
Q Consensus       178 --------r~~~~~~--K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHEN  247 (461)
T Consensus       168 ~~eg~~vlR~K~Dm~~~N~~mRDpv~yRi~~~~H~rtg~k~~-iyP~YDFa-~~i~D~~egiTHsl~t----~Ef~~~-r  240 (556)
T PRK05347        168 FPEGSAVLRAKIDMASPNINMRDPVLYRIRHAHHHRTGDKWC-IYPMYDFA-HCISDAIEGITHSLCT----LEFEDH-R  240 (556)
T ss_pred             CCCCEEEEEEEEECCCCCCCCCCCEEEEECCCCCCCCCCCEE-ECCCCCCC-CCHHHHHCCCCEEEEC----CCCCCC-H
T ss_conf             778628999985148999541245257842468888688226-61242124-2314565387424204----741005-4


Q ss_pred             HHHHHHH--HCC-CCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCC--------------CCCCCCCHHHHHHH
Q ss_conf             6688886--408-753012100343257642022332332140899850253--------------34557779999999
Q gi|254780573|r  248 EIAQSCC--ADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK--------------FGGRSWPAPVIRLA  310 (461)
Q Consensus       248 EiAQs~a--~~~-~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~--------------~~~k~y~p~viR~~  310 (461)
T Consensus       241 ~~Y~w~~~~l~~~~~P--~-~~ef~Rln~~~tvlSKr-----kl~~lV~~g~v~GWDDPRlpTl~glrRRG~~peAi~~F  312 (556)
T PRK05347        241 PLYDWVLDNLPIPPHP--R-QYEFSRLNLTYTVMSKR-----KLKQLVEEKHVDGWDDPRMPTISGLRRRGYTPESIREF  312 (556)
T ss_pred             HHHHHHHHHCCCCCCC--E-EEEEEEEEEEEEECCHH-----HHHHHHHCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHH
T ss_conf             6576603402788883--4-88863466520222088-----99999975976787787505668887569998999999


Q ss_pred             HHCCCCCC-CCCCCHHHHHHHH
Q ss_conf             84256643-2114503468777
Q gi|254780573|r  311 MLMTHYRE-PIDFTVQRLTEAE  331 (461)
Q Consensus       311 lLsshYRs-pLdfS~e~L~~A~  331 (461)
T Consensus       313 ~~~~Gvsk~~~~i~~~~l~~~~  334 (556)
T PRK05347        313 CERIGVTKQDSVIDMSMLESCI  334 (556)
T ss_pred             HHHHCCCCCCEEECHHHHHHHH
T ss_conf             9984854444053299999999