HHsearch alignment for GI: 254780573 and conserved domain: PRK12556
>PRK12556 tryptophanyl-tRNA synthetase; Provisional.
Probab=91.94 E-value=0.031 Score=36.29 Aligned_cols=211 Identities=20% Similarity=0.170 Sum_probs=97.7
Q ss_pred EEEECCCCCCCCCCCCCHHHHHHHHHHHHHHH---HCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHH
Q ss_conf 99616788884441112799999999999997---079984579960552338889999870898644884899999999
Q gi|254780573|r 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY---YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104 (461)
Q Consensus 28 ~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~---~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~ 104 (461)
T Consensus 5 ~i~SGiqPTG~lHLGNYlGai-----k~~v~l~~~~~~~--~~~~--IaDlHa--l--------T~--~~dp~~l~~-~~ 62 (328)
T PRK12556 5 IMLTGIKPTGYPHLGNYIGAI-----KPALQMSKNNEGK--ALYF--IADYHA--L--------NA--VHDPEQFSS-YT 62 (328)
T ss_pred EEEECCCCCCCCCHHHHHHHH-----HHHHHHHHCCCCC--EEEE--EECHHH--C--------CC--CCCHHHHHH-HH
T ss_conf 688577989975088899999-----9999975479987--7999--851422--3--------58--899999999-99
Q ss_pred HHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEECCHHCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 99999877626854100012356777789999987411432012892875220024543224675466664321022221
Q gi|254780573|r 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184 (461)
Q Consensus 105 ~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g~VyFdv~~~~~YG~Ls~~~~~~~~~g~r~~~~~~ 184 (461)
T Consensus 63 ~~~~a~~LA~GlDP-~~~~f~QS~Vpeh~eL~wil-----------------~~~~~~g~L~Rm~q~K~k~~~~~~--~~ 122 (328)
T PRK12556 63 KEVAATWLSLGLGE-DVIFYRQTEVPEILELAWIL-----------------ACLTPKGLMNRAHAYKAKVEQNKE--AG 122 (328)
T ss_pred HHHHHHHHHCCCCC-CEEEEECCCCHHHHHHHHHH-----------------HCCCCHHHHHHCCCCCHHHHHHHH--CC
T ss_conf 99999999758998-74999878973999999999-----------------776838888515323005565454--03
Q ss_pred CCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCCCCCCH--HHHHHHHH-HCCCCCC
Q ss_conf 01235126663377666314146776676433204777787529841487413566668751--36688886-4087530
Q gi|254780573|r 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE--NEIAQSCC-ADRIEKT 261 (461)
Q Consensus 185 K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~FPHHE--NEiAQs~a-~~~~~~~ 261 (461)
T Consensus 123 ~-~~-~~----~i~~GL~--------~YP------vLmAADILly~a~~VPVGeDQ~-QHlEltRdiA~rFN~~yg-~~f 180 (328)
T PRK12556 123 L-EV-DA----GVNMGLY--------TYP------ILMAADILLFQATHVPVGKDQI-QHIEIARDIATYFNHTFG-TTF 180 (328)
T ss_pred C-CC-CC----CCCCCCC--------CCC------HHHHCHHHHCCCCEECCCCCHH-HHHHHHHHHHHHHHHHCC-CCC
T ss_conf 5-75-55----6555456--------650------7653311302664504681069-999999999999987557-556
Q ss_pred H--HHEE--CCCE-EEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCC
Q ss_conf 1--2100--3432-57642022332332140899850253345577799999998425
Q gi|254780573|r 262 A--NIWI--HNGF-LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314 (461)
Q Consensus 262 a--~yWl--H~G~-l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLss 314 (461)
T Consensus 181 ~~P~~~i~~~~~~i~gldgkKMSKS~~n~I~L~D------------~~d~I~kKI~ka 226 (328)
T PRK12556 181 TLPEYVIQEEGAILPGLDGRKMSKSYGNVIPLFA------------EQEKLRKLIFKI 226 (328)
T ss_pred CCCCCCCCCCCCEEECCCCCCCCCCCCCCCCCCC------------CHHHHHHHHHHC
T ss_conf 7864333765433108998765568788134768------------999999999745