HHsearch results for GI: 254780573 and protein with PDBid: 2o5r_A

>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate- tRNA ligase 1, glurs 1, structural genomics; 2.34A {Thermotoga maritima}
Probab=99.50  E-value=1.4e-11  Score=101.56  Aligned_cols=248  Identities=16%  Similarity=0.221  Sum_probs=146.9

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf             67888844411127999999999999970799845799605523388899998708986448848999999999999987
Q gi|254780573|r   32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT  111 (461)
Q Consensus        32 GpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d~  111 (461)
                      -|++-++.||||+||+++-.++.|-   .|+    +++.-|-|.|-   .|.                ...|++..+++|
T Consensus        19 APsPtG~lHiG~~rtal~n~~~Ak~---~~G----~~iLRieDTD~---~R~----------------~~~~~~~I~~~L   72 (481)
T 2o5r_A           19 APSPTGFLHVGGARTALFNFLFARK---EKG----KFILRIEDTDL---ERS----------------EREYEEKLMESL   72 (481)
T ss_dssp             CCCCCSCCBHHHHHHHHHHHHHHHH---HTC----EEEECBCCSSC---CSG----------------GGHHHHHHHHHH
T ss_pred             CCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCC---CCC----------------CHHHHHHHHHHH
T ss_conf             8798974208999999999999998---499----89998687898---758----------------879999999999


Q ss_pred             HHHCCCCCC--------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------CEEECC---HHCCCCCCC--CCCCHH-
Q ss_conf             762685410--------001235677778999998741143201289------287522---002454322--467546-
Q gi|254780573|r  112 TRLACLAPT--------HQPRATNHIPQMIYLIQNIILHGHAYEANN------EIIFDT---SSIPNYGSF--SRRKID-  171 (461)
Q Consensus       112 ~~L~v~~p~--------~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g------~VyFdv---~~~~~YG~L--s~~~~~-  171 (461)
                      ..|++....        -.-+.|++++..-+++++|+++|+||.---      ..--..   .+-+.|..-  -..+.. 
T Consensus        73 ~wlGl~~De~p~~~~~~~~~~QS~r~~~y~~~~~~Li~~G~aY~C~cs~eel~~~r~~~~~~~~~~~y~~~~~~~~~~~~  152 (481)
T 2o5r_A           73 RWLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPE  152 (481)
T ss_dssp             HHHTCCCSBBTTTBCTTCCCBGGGGHHHHHHHHHHHHHTTSEEEECCCSTTTHHHHHHHHHTTCCCCBCGGGGTTTCCHH
T ss_pred             HHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHH
T ss_conf             97699877687778898874098689999999999987699661233177775666554203568776603442244423


Q ss_pred             HHH-HHH-HCCCCCCCCCCCCEEEEECCCCCCCEEECC-C-------CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf             666-432-102222101235126663377666314146-7-------766764332047777875298414874135666
Q gi|254780573|r  172 EQK-MGT-RVPEKYHKKNPADFILWKRSTPMEPGWESP-W-------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI  241 (461)
Q Consensus       172 ~~~-~g~-r~~~~~~K~~p~DFaLWK~~~~~e~~w~sp-w-------G~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~  241 (461)
                      ... ... .....-..+.|..-.-|.-.-.|++.++.+ .       ..|-|-.|+- ++.-....|  +.-..-|.|  
T Consensus       153 ~~~~~~~~~~~~~~r~~~~~~~~~~~D~i~G~i~~~~~~~~D~Vi~R~Dg~PtY~fa-~vvDD~~~~--ithvirg~d--  227 (481)
T 2o5r_A          153 RRREYEEKGLRPAVFFKMPRKDYVLNDVVKGEVVFKTGAIGDFVIMRSNGLPTYNFA-CVVDDMLME--ITHVIRGDD--  227 (481)
T ss_dssp             HHHHHHHTTCCCEEEECCCSSCEEEEETTTEEEEECTTSSCBEEEECTTSCBCHHHH-HHHHHHHTT--CSEEEEEGG--
T ss_pred             HHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEECCCCCCCCEEEEECCCCCCEEEE-EEECCCCCC--CCEEECCCC--
T ss_conf             321223316660366316766731110214424226656799789914787102220-030675568--564315630--


Q ss_pred             CCCCHHHHHH---HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf             6875136688---8864087530121003432576420223323321408998502533455777999999984256643
Q gi|254780573|r  242 FPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE  318 (461)
Q Consensus       242 FPHHENEiAQ---s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLsshYRs  318 (461)
                        |..|--.|   .+|+.-  +...||-|.-.++.+|+||||-.|. ++|+++.+      +||-|++++-||..--|+.
T Consensus       228 --~~~~t~~~~~~~~~l~~--~~p~~~h~~~i~~~dg~KLSKR~g~-~si~~~r~------~G~~p~Al~NyL~~LGws~  296 (481)
T 2o5r_A          228 --HLSNTLRQLALYEAFEK--APPVFAHVSTILGPDGKKLSKRHGA-TSVEAFRD------MGYLPEALVNYLALLGWSH  296 (481)
T ss_dssp             --GHHHHHHHHHHHHHTTC--CCCEEEEECCEECTTSSBCCGGGSC-CBHHHHHH------HTCCHHHHHHHHHTSSBCC
T ss_pred             --HHHHHHHHHHHHHHHCC--CCCEEEECHHHCCCCCCCCCCCCCC-CCHHHHHH------CCCCHHHHHHHHHHHCCCC
T ss_conf             --45635999999998475--9983895054408998975664797-58999998------7998899999999947999


Q ss_pred             CCC
Q ss_conf             211
Q gi|254780573|r  319 PID  321 (461)
Q Consensus       319 pLd  321 (461)
                      +-+
T Consensus       297 ~~~  299 (481)
T 2o5r_A          297 PEG  299 (481)
T ss_dssp             TTC
T ss_pred             CCC
T ss_conf             976