HHsearch results for GI: 254780573 and protein with PDBid: 2o5r_A
>2o5r_A Glutamyl-tRNA synthetase 1; TM1351, EC 6.1.1.17, glutamate- tRNA ligase 1, glurs 1, structural genomics; 2.34A {Thermotoga maritima}
Probab=99.50 E-value=1.4e-11 Score=101.56 Aligned_cols=248 Identities=16% Similarity=0.221 Sum_probs=146.9
Q ss_pred CCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHH
Q ss_conf 67888844411127999999999999970799845799605523388899998708986448848999999999999987
Q gi|254780573|r 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111 (461)
Q Consensus 32 GpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~~a~~~~~~~~~~~~~~~~a~~~~~~f~~d~ 111 (461)
-|++-++.||||+||+++-.++.|- .|+ +++.-|-|.|- .|. ...|++..+++|
T Consensus 19 APsPtG~lHiG~~rtal~n~~~Ak~---~~G----~~iLRieDTD~---~R~----------------~~~~~~~I~~~L 72 (481)
T 2o5r_A 19 APSPTGFLHVGGARTALFNFLFARK---EKG----KFILRIEDTDL---ERS----------------EREYEEKLMESL 72 (481)
T ss_dssp CCCCCSCCBHHHHHHHHHHHHHHHH---HTC----EEEECBCCSSC---CSG----------------GGHHHHHHHHHH
T ss_pred CCCCCCCCCHHHHHHHHHHHHHHHH---CCC----EEEEEECCCCC---CCC----------------CHHHHHHHHHHH
T ss_conf 8798974208999999999999998---499----89998687898---758----------------879999999999
Q ss_pred HHHCCCCCC--------HHHHHHHHHHHHHHHHHHHHHCCCCCCCCC------CEEECC---HHCCCCCCC--CCCCHH-
Q ss_conf 762685410--------001235677778999998741143201289------287522---002454322--467546-
Q gi|254780573|r 112 TRLACLAPT--------HQPRATNHIPQMIYLIQNIILHGHAYEANN------EIIFDT---SSIPNYGSF--SRRKID- 171 (461)
Q Consensus 112 ~~L~v~~p~--------~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g------~VyFdv---~~~~~YG~L--s~~~~~- 171 (461)
..|++.... -.-+.|++++..-+++++|+++|+||.--- ..--.. .+-+.|..- -..+..
T Consensus 73 ~wlGl~~De~p~~~~~~~~~~QS~r~~~y~~~~~~Li~~G~aY~C~cs~eel~~~r~~~~~~~~~~~y~~~~~~~~~~~~ 152 (481)
T 2o5r_A 73 RWLGLLWDEGPDVGGDHGPYRQSERVEIYREHAERLVKEGKAYYVYAYPEEIEEMREKLLSEGKAPHYSQEMFEKFDTPE 152 (481)
T ss_dssp HHHTCCCSBBTTTBCTTCCCBGGGGHHHHHHHHHHHHHTTSEEEECCCSTTTHHHHHHHHHTTCCCCBCGGGGTTTCCHH
T ss_pred HHCCCCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCHHHHCCCCHH
T ss_conf 97699877687778898874098689999999999987699661233177775666554203568776603442244423
Q ss_pred HHH-HHH-HCCCCCCCCCCCCEEEEECCCCCCCEEECC-C-------CCCCCCCCCHHHHHHHHHCCCCEEEEEECCCCC
Q ss_conf 666-432-102222101235126663377666314146-7-------766764332047777875298414874135666
Q gi|254780573|r 172 EQK-MGT-RVPEKYHKKNPADFILWKRSTPMEPGWESP-W-------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241 (461)
Q Consensus 172 ~~~-~g~-r~~~~~~K~~p~DFaLWK~~~~~e~~w~sp-w-------G~GRPGWHiECsam~~~~lg~~~DIH~GG~DL~ 241 (461)
... ... .....-..+.|..-.-|.-.-.|++.++.+ . ..|-|-.|+- ++.-....| +.-..-|.|
T Consensus 153 ~~~~~~~~~~~~~~r~~~~~~~~~~~D~i~G~i~~~~~~~~D~Vi~R~Dg~PtY~fa-~vvDD~~~~--ithvirg~d-- 227 (481)
T 2o5r_A 153 RRREYEEKGLRPAVFFKMPRKDYVLNDVVKGEVVFKTGAIGDFVIMRSNGLPTYNFA-CVVDDMLME--ITHVIRGDD-- 227 (481)
T ss_dssp HHHHHHHTTCCCEEEECCCSSCEEEEETTTEEEEECTTSSCBEEEECTTSCBCHHHH-HHHHHHHTT--CSEEEEEGG--
T ss_pred HHHHHHHCCCCCEEEECCCCCCCEEECCCCCEEECCCCCCCCEEEEECCCCCCEEEE-EEECCCCCC--CCEEECCCC--
T ss_conf 321223316660366316766731110214424226656799789914787102220-030675568--564315630--
Q ss_pred CCCCHHHHHH---HHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCC
Q ss_conf 6875136688---8864087530121003432576420223323321408998502533455777999999984256643
Q gi|254780573|r 242 FPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318 (461)
Q Consensus 242 FPHHENEiAQ---s~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLsshYRs 318 (461)
|..|--.| .+|+.- +...||-|.-.++.+|+||||-.|. ++|+++.+ +||-|++++-||..--|+.
T Consensus 228 --~~~~t~~~~~~~~~l~~--~~p~~~h~~~i~~~dg~KLSKR~g~-~si~~~r~------~G~~p~Al~NyL~~LGws~ 296 (481)
T 2o5r_A 228 --HLSNTLRQLALYEAFEK--APPVFAHVSTILGPDGKKLSKRHGA-TSVEAFRD------MGYLPEALVNYLALLGWSH 296 (481)
T ss_dssp --GHHHHHHHHHHHHHTTC--CCCEEEEECCEECTTSSBCCGGGSC-CBHHHHHH------HTCCHHHHHHHHHTSSBCC
T ss_pred --HHHHHHHHHHHHHHHCC--CCCEEEECHHHCCCCCCCCCCCCCC-CCHHHHHH------CCCCHHHHHHHHHHHCCCC
T ss_conf --45635999999998475--9983895054408998975664797-58999998------7998899999999947999
Q ss_pred CCC
Q ss_conf 211
Q gi|254780573|r 319 PID 321 (461)
Q Consensus 319 pLd 321 (461)
+-+
T Consensus 297 ~~~ 299 (481)
T 2o5r_A 297 PEG 299 (481)
T ss_dssp TTC
T ss_pred CCC
T ss_conf 976