HHsearch results for GI: 254780573 and protein with PDBid: 3c8z_A
>3c8z_A Cysteinyl-tRNA synthetase; cysteine ligase, rossmann fold, Cys-SA inhibitor, zinc binding, ATP-binding, aminoacyl-tRNA synthetase; HET: 5CA 1PE EPE; 1.60A {Mycobacterium smegmatis}
Probab=100.00 E-value=0 Score=982.26 Aligned_cols=379 Identities=31% Similarity=0.563 Sum_probs=354.2
Q ss_pred CCCCEEEECCCCCEEEEEECCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCHHHHH
Q ss_conf 88741898889826223304798479996167888844411127999999999999970799845799605523388899
Q gi|254780573|r 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81 (461)
Q Consensus 2 ~~~l~lyntlt~~~~~f~p~~~~~v~~Y~CGpTvy~~~HiG~~r~~v~~D~l~R~L~~~~~~~~V~~v~niTDidDkii~ 81 (461)
.+.|+|||||||++|+|+| +++|+||+|||||||++||||+|+||+||+|+|+|++.||+ |+||+||||||||||+
T Consensus 18 ~~~l~lyntlt~~~~~~~p--~~~v~~Y~CGpTvy~~~HIGhaRt~v~~D~l~R~L~~~G~~--V~~v~nitDiddKIi~ 93 (414)
T 3c8z_A 18 GPALRLFDSADRQVRPVTP--GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDAGHT--VQYVQNVTDVDDPLFE 93 (414)
T ss_dssp CCCCEEEETTTTEEEECCC--CSEEEEEECCCCTTSCCBHHHHHHHHHHHHHHHHHHHTTCE--EEEEEEECCSCHHHHH
T ss_pred CCCEEEEECCCCCEEECCC--CCEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCC--EEEEECCCCCHHHHHH
T ss_conf 9965999889897563678--89515985899778886400032699999999999985996--6998656853389999
Q ss_pred HHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC----CEEECCH
Q ss_conf 998708986448848999999999999987762685410001235677778999998741143201289----2875220
Q gi|254780573|r 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTS 157 (461)
Q Consensus 82 ~a~~~~~~~~~~~~~~~~a~~~~~~f~~d~~~L~v~~p~~~pr~t~~i~~~i~~i~~L~~~g~aY~~~g----~VyFdv~ 157 (461)
+|+++|++ +.|+|++|++.|+++|++|||++|+.+|||||||++||.+|++|+++|+||+++| +|||+|+
T Consensus 94 ~A~~~g~~------~~e~a~~~~~~f~~~~~~L~i~~~~~~~rate~i~~ii~~i~~l~~kg~aY~~~~~~~~~vyf~~~ 167 (414)
T 3c8z_A 94 RAERDGID------WRTLGDRETQLFREDMAALRVLPPHDYVAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRAD 167 (414)
T ss_dssp HHHHHTCC------HHHHHHHHHHHHHHHHHHTTCCCCSEEEEGGGCHHHHHHHHHHHHHHTSEEECSCSSCCCEEECTT
T ss_pred HHHHCCCC------HHHHHHHHHHHHHHHHHHHCCCCCCEEECCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEC
T ss_conf 98754999------999999999999999987468999566314002999999999986423200126875542799830
Q ss_pred HCCCCCCCCCCCHHHHHHHHHC----CCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCCCCHHHHHHHHHCCCCEEE
Q ss_conf 0245432246754666643210----222210123512666337766631414677667643320477778752984148
Q gi|254780573|r 158 SIPNYGSFSRRKIDEQKMGTRV----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233 (461)
Q Consensus 158 ~~~~YG~Ls~~~~~~~~~g~r~----~~~~~K~~p~DFaLWK~~~~~e~~w~spwG~GRPGWHiECsam~~~~lg~~~DI 233 (461)
++++||+||+++.+++..+.+. ...+.|+||.||+|||++++++|.|+||||+||||||||||||+.++||.+|||
T Consensus 168 ~~~~yg~l~~~~~~~~~~~~~~~~~~~~~~~K~~~~DF~Lwk~~~~~~~~w~SpwG~GrPgWHiECsam~~~~lg~~~DI 247 (414)
T 3c8z_A 168 ATAQFGYESGYDRDTMLTLFAERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGLDI 247 (414)
T ss_dssp SSTTTTTTTCCCHHHHHHHHHHTTCCTTCTTCSSTTCEEEEEECCTTSCCBCCTTCSEEECHHHHHHHHHHHHTCSCEEE
T ss_pred CHHHCCCCCCCCHHHHHHHHHHHCCCCCHHCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCEEE
T ss_conf 33314742111156665554320243200002587776411026657876348877628846744248887406983357
Q ss_pred EEECCCCCCCCCHHHHHHHHHHCCCCCCHHHEECCCEEEEEECCCCCCCCCCCCHHHHHCCCCCCCCCCCHHHHHHHHHC
Q ss_conf 74135666687513668888640875301210034325764202233233214089985025334557779999999842
Q gi|254780573|r 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313 (461)
Q Consensus 234 H~GG~DL~FPHHENEiAQs~a~~~~~~~a~yWlH~G~l~i~geKMSKSlGN~iti~dlL~~~~~~~k~y~p~viR~~lLs 313 (461)
|+||+||+|||||||||||+|+++..+||+||||+|||+++|+|||||+|||++++|+++ ++|+|+++||+||+
T Consensus 248 H~GG~Dl~fPHHeneiAq~~a~~g~~~~~~~w~h~g~l~~~g~KMSKSlGN~~~~~d~l~------~~~~~~~~R~~ll~ 321 (414)
T 3c8z_A 248 QGGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQLRA------QGVDPSAIRLGLFS 321 (414)
T ss_dssp EEEEGGGTTTHHHHHHHHHHHHHCCSCSEEEEEEECCBC-------------CBHHHHHH------TTCCHHHHHHHHHT
T ss_pred ECCCCCCCCCCHHHHHHHHHHHHCCCCCCHHHEECCEEEECCCCCCCCCCCCCCHHHHHH------HCCCHHHHHHHHHH
T ss_conf 405565566316769999999749974012122333798506467776887031999986------27988998999986
Q ss_pred CCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCC-----CCCHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC-----HHHHH
Q ss_conf 56643211450346877764321000013510-----059677630211012799999999999975130-----67999
Q gi|254780573|r 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----HDLLP 383 (461)
Q Consensus 314 shYRspLdfS~e~L~~A~~~l~kl~~~~~~~~-----~~~~~f~~AL~DDLNTp~ALa~L~~lvk~~n~~-----~~~~~ 383 (461)
+|||+||+||++.|++|++.++||+.+..... ++.++|.+||+||||||.||++||++++.+|+. .+...
T Consensus 322 ~hYr~~l~fs~e~l~~a~~~l~rl~~~~~~~~~~~~~~~~~~f~~al~DDlntp~Al~~l~~li~~~n~~~~~d~~~~~~ 401 (414)
T 3c8z_A 322 GHYREDRFWSNEVLDEANARLARWRSATALPEAPDATDVIARVRQYLADDLDTPKALAALDGWCTDALSYGGHDTESPRL 401 (414)
T ss_dssp SCTTSCBCCCHHHHHHHHHHHHHHHHHHTSSCBSCCHHHHHHHHHHHHBTCCHHHHHHHHHHHHHHHHHHCCSBSSHHHH
T ss_pred CCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHH
T ss_conf 11575113899999999999999999861545675368999999998767885899999999999998645865666999
Q ss_pred HHHHHHHHCCCCC
Q ss_conf 9999998717674
Q gi|254780573|r 384 IFNASAHILGIEV 396 (461)
Q Consensus 384 ~~~~~~~iLGl~~ 396 (461)
++..+..||||++
T Consensus 402 ~~~~~~~vLGl~L 414 (414)
T 3c8z_A 402 VATTVDALLGVDL 414 (414)
T ss_dssp HHHHHHHHHCCCC
T ss_pred HHHHHHHHCCCCC
T ss_conf 9999998248779