BLASTP 2.2.22 [Sep-27-2009]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for composition-based statistics:
Schaffer, Alejandro A., L. Aravind, Thomas L. Madden,
Sergei Shavirin, John L. Spouge, Yuri I. Wolf,
Eugene V. Koonin, and Stephen F. Altschul (2001),
"Improving the accuracy of PSI-BLAST protein database searches with
composition-based statistics and other refinements", Nucleic Acids Res. 29:2994-3005.
Query= gi|254780573|ref|YP_003064986.1| cysteinyl-tRNA synthetase
[Candidatus Liberibacter asiaticus str. psy62]
(461 letters)
Database: nr
14,124,377 sequences; 4,842,793,630 total letters
Searching..................................................done
>gi|254780573|ref|YP_003064986.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040250|gb|ACT57046.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 461
Score = 469 bits (1208), Expect = e-130, Method: Composition-based stats.
Identities = 461/461 (100%), Positives = 461/461 (100%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY
Sbjct: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT
Sbjct: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP
Sbjct: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL
Sbjct: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR
Sbjct: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN
Sbjct: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL
Sbjct: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP
Sbjct: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
>gi|307946682|ref|ZP_07662017.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307770346|gb|EFO29572.1| cysteinyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 477
Score = 456 bits (1172), Expect = e-126, Method: Composition-based stats.
Identities = 267/458 (58%), Positives = 346/458 (75%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +++ NTL R +F I +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL + YG
Sbjct: 19 KGLRVTNTLTRTKEDFVPISDANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLNHLYG 78
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA ++HP +P+N+AI+ +T + QF D RL CL PTH+
Sbjct: 79 GENVTYARNITDVDDKINARALRDHPDLPLNEAIAKVTERTANQFHVDIARLGCLEPTHE 138
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI MI +I +I G+AY A+ E++FDT+S+P YG S+R +DEQK G R+ +
Sbjct: 139 PRATGHIGGMIAMIDTLIAKGNAYVASGEVLFDTTSMPAYGGLSKRNLDEQKAGARIAVE 198
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNPADF+LWK S+ EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGLDLIF
Sbjct: 199 AHKKNPADFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGLDLIF 258
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA+ +K +N W+HNGFL +EGRKMSKS GNF TI+ELL+ + FGGR W
Sbjct: 259 PHHENEIAQSCCANGTKKMSNYWMHNGFLQVEGRKMSKSEGNFFTIHELLDDETFGGRKW 318
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+ +RL EAE LLSKWP + A+L AL +DLNTV
Sbjct: 319 PGEVLRLAMLMTHYREPIDFSKKRLEEAERLLSKWPAPIETDAAPSEAILEALTDDLNTV 378
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+AIQ LH+LA E+ +N ++L +++ASA +LG++ K ++ + +I+ V ERL LK
Sbjct: 379 AAIQVLHQLAAEAAQNPEMLGVYSASAALLGVQPVKADTSELDTSSIDARVSERLEQLKA 438
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD IR +L ++G +L+D K+ + G+R+T W+ K
Sbjct: 439 KNWAEADRIRDELAAEGILLKDGKDAETGERVTTWEVK 476
>gi|118588096|ref|ZP_01545506.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
gi|118439718|gb|EAV46349.1| cysteinyl-tRNA synthetase [Stappia aggregata IAM 12614]
Length = 471
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 261/458 (56%), Positives = 332/458 (72%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +K+ NTL R+ +F+AID N+R+YVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 13 KGLKLTNTLTRQKEDFRAIDDGNVRLYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTY RNITD+DDKI RA ++ P +P+N+AI+ +T K QF KD L L P+ +
Sbjct: 73 ADHVTYARNITDVDDKINARALRDFPDLPLNEAIARVTQKTADQFHKDIRSLGVLEPSIE 132
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI M+ +I +I GHAY+A E++FDT S+P+YG S+RK+DEQ G R+
Sbjct: 133 PRATQHIGGMVEMIAALIEKGHAYQAGGEVLFDTQSMPDYGGLSKRKLDEQLAGARIAVD 192
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGW+SPWGRGRPGWHIECS MS+ +LG+VFDIHGGGLDLIF
Sbjct: 193 AHKKNPGDFVLWKLSSDEEPGWDSPWGRGRPGWHIECSVMSAQHLGEVFDIHGGGLDLIF 252
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + AN W+HNGFL +EGRKMSKS GNF TI ELLET FGGR W
Sbjct: 253 PHHENEIAQSRCAHGTKVMANYWMHNGFLQVEGRKMSKSEGNFFTIQELLETDSFGGRKW 312
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMT+YREPIDF+ ++L EAE LL++WP + VL AL +DLNT
Sbjct: 313 PGEVLRLAMLMTNYREPIDFSKRKLEEAENLLARWPDPVETDAAPAAEVLDALLDDLNTA 372
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
AIQALH LA E++K+ L +++ASA +LG+ K L+ AI+ +++RL L
Sbjct: 373 GAIQALHALAVEASKDPAKLTVYSASAALLGVHPVKADLSGVDEAAIQAAIEKRLEALNA 432
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD IR L S+G +L+D K+ + G R+T W+ K
Sbjct: 433 KNWAEADAIRDDLTSQGILLKDSKDSETGARVTTWEVK 470
>gi|150395937|ref|YP_001326404.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
gi|187631642|sp|A6U7D9|SYC_SINMW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150027452|gb|ABR59569.1| cysteinyl-tRNA synthetase [Sinorhizobium medicae WSM419]
Length = 466
Score = 452 bits (1163), Expect = e-125, Method: Composition-based stats.
Identities = 276/456 (60%), Positives = 349/456 (76%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ T+F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 7 LKLYNTLTREKTDFRPIDPKNVRMYVCGPTVYDFAHIGNARPIIVFDVLFRLLRHVYGTD 66
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITD+DDKI RA +++P +P+N+AI +T + +F++D L CL PT QPR
Sbjct: 67 HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTERTETRFLEDAALLGCLDPTVQPR 126
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +IP MI +I+ +I GHAYEA E++FDT S+ YG S+R +DEQ+ G RV + H
Sbjct: 127 ATENIPGMIEIIETLIAKGHAYEAEGEVLFDTRSMAEYGQLSKRNLDEQQAGARVAVEAH 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK S EPGWESPWGRGRPGWHIECSAMS YLG+VFDIHGGG+DLIFPH
Sbjct: 187 KRNPGDFVLWKLSAGHEPGWESPWGRGRPGWHIECSAMSGRYLGEVFDIHGGGIDLIFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA AN+W+HNGFL +EGRKMSKS GNFITI +LL T+KFGGR WP
Sbjct: 247 HENEIAQSRCAHGTAVMANVWMHNGFLQVEGRKMSKSEGNFITIYDLLHTEKFGGRKWPG 306
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
V+RLAMLMTHYREPIDF+++RL EAE LLSKWP ++ G DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVHGSASGEADPAVVAALTDDLNTVAA 366
Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
IQALH LA+++T + L F ASA +LG+E + L++ + I+ V+ERL LLK K
Sbjct: 367 IQALHALAQKATADARHLGAFAASAALLGVEPKEIELDEAVVQEIDGRVRERLELLKSKN 426
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
++ AD IR L ++G L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462
>gi|86357063|ref|YP_468955.1| cysteinyl-tRNA synthetase [Rhizobium etli CFN 42]
gi|109894928|sp|Q2KAA8|SYC_RHIEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|86281165|gb|ABC90228.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CFN 42]
Length = 458
Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 267/458 (58%), Positives = 340/458 (74%), Gaps = 5/458 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F+ ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PELKLYNTLTREKSAFKPIDAENVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+N+AI +T K QF D L CL P+ +
Sbjct: 65 EDHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPSVE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +MI +I+ +I +GHAY A E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 125 PRATDNIAEMIQIIEKLIGNGHAYVAAGEVLFDTKSMADYGELSKRPLDEQQAGARVAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGWESPWGRGRPGWHIECSAMS YLG +FDIHGGGLDLIF
Sbjct: 185 AHKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIF 244
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKW 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+++RL EAE LL+KWP D +VL+AL +DLNTV
Sbjct: 305 PGEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPTAEAGDAAPDESVLNALADDLNTV 364
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+A+QALH LA+ +F ASA +LG+ K +++ + A++ LV RL +LK
Sbjct: 365 AAVQALHALAQPGND-----AVFAASAVLLGVLPKKVEIDEAFAAAVDALVAMRLEVLKA 419
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F AD IR +L +KG L+D K+P+ G+R+T W+ K
Sbjct: 420 KNFVEADRIRDELGAKGIQLKDGKDPETGERVTTWEVK 457
>gi|307300935|ref|ZP_07580704.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
gi|306903890|gb|EFN34476.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
Length = 466
Score = 451 bits (1159), Expect = e-124, Method: Composition-based stats.
Identities = 276/456 (60%), Positives = 347/456 (76%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 7 LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITD+DDKI RA +++P +P+N+AI +T K QF++D T L CL PT QPR
Sbjct: 67 HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I MI +I+ +I GHAYEA E++FDT S+ +YG S+R +DEQ+ G RV + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK S EPGW+SPWGRGRPGWHIECSAMS YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA E AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
V+RLAMLMTHYREPIDF+++RL EAE LLSKWP + G DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366
Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
IQALH LA++++ + L F ASA +LG+ + L++ + I+ V+ERL LLK K
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGLVPKEVELDEAVVHEIDGRVRERLELLKAKN 426
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
++ AD IR L ++G L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462
>gi|116251309|ref|YP_767147.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
gi|123384854|sp|Q1MJ22|SYC_RHIL3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|115255957|emb|CAK07038.1| putative cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 463
Score = 449 bits (1156), Expect = e-124, Method: Composition-based stats.
Identities = 270/458 (58%), Positives = 344/458 (75%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLRY YG
Sbjct: 5 PELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRYVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+NDAI +T K QF D L CL P +
Sbjct: 65 EDHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHADVAELGCLEPNFE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +M +I+ +I +GHAY A+ E++FDT S+ +YG S+R +DEQ+ G R+
Sbjct: 125 PRATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGWESPWGRGRPGWHIECSAMS YLG VFDIHGGGLDLIF
Sbjct: 185 AHKKNPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLIF 244
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E AN+W+HNGFL +EGRKMSKS GNF+TI+ELL+T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLQTETFGGRKW 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+++RL EAE LL+KWP S D +VL+AL +DLNTV
Sbjct: 305 PGQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEASDAAPDESVLNALSDDLNTV 364
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+A+QALH LA+ + + +F A+A +LG+ K +++ ++ A++ LV RL +LK
Sbjct: 365 AAVQALHALAQAAHGDPTARAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLKA 424
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR +L +KG L+D K+ G+R+T W+ K
Sbjct: 425 KNFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462
>gi|15964864|ref|NP_385217.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
gi|307321838|ref|ZP_07601224.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
gi|21264014|sp|Q92R20|SYC_RHIME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15074043|emb|CAC45690.1| Probable cysteinyl-tRNA synthetase [Sinorhizobium meliloti 1021]
gi|306892507|gb|EFN23307.1| cysteinyl-tRNA synthetase [Sinorhizobium meliloti AK83]
Length = 466
Score = 449 bits (1155), Expect = e-124, Method: Composition-based stats.
Identities = 276/456 (60%), Positives = 347/456 (76%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 7 LKLYNTLTREKADFRPIDPQNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVYGAD 66
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITD+DDKI RA +++P +P+N+AI +T K QF++D T L CL PT QPR
Sbjct: 67 HVTYARNITDVDDKINARALRDYPGLPLNEAIRHVTEKTETQFLEDATVLGCLDPTVQPR 126
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I MI +I+ +I GHAYEA E++FDT S+ +YG S+R +DEQ+ G RV + H
Sbjct: 127 ATENIAGMIEIIEKLIAKGHAYEAEGEVLFDTRSMDDYGQLSKRNLDEQQAGARVAVEAH 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK S EPGW+SPWGRGRPGWHIECSAMS YLG VFDIHGGG+DLIFPH
Sbjct: 187 KKNPGDFVLWKLSAEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGIDLIFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA E AN+W+HNGFL +EGRKMSKS GNFITI ELL T+KFGGR WP
Sbjct: 247 HENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFITIYELLHTEKFGGRKWPG 306
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
V+RLAMLMTHYREPIDF+++RL EAE LLSKWP + G DPAV++AL +DLNTV+A
Sbjct: 307 EVLRLAMLMTHYREPIDFSIKRLEEAEHLLSKWPVYGDAAGEADPAVVTALADDLNTVAA 366
Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
IQALH LA++++ + L F ASA +LG+ + L++ + I+ V+ERL LLK K
Sbjct: 367 IQALHALAQKASADSRHLGTFAASAALLGVVPKEVELDEAVVHEIDGRVRERLELLKAKN 426
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
++ AD IR L ++G L+D K+P+ G+R+T W+ K
Sbjct: 427 YAEADGIRADLLARGIQLKDGKDPETGERVTTWEVK 462
>gi|241203922|ref|YP_002975018.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240857812|gb|ACS55479.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 463
Score = 449 bits (1154), Expect = e-124, Method: Composition-based stats.
Identities = 267/458 (58%), Positives = 343/458 (74%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PELKLYNTLTREKSVFSPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+NDAI +T K QF D L CL P+ +
Sbjct: 65 EDHVTYARNITDVDDKINARALRDHPGLPLNDAIRAVTEKTETQFHTDVAELGCLEPSFE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +M +I+ +I +GHAY A+ E++FDT S+ +YG S+R +DEQ+ G R+
Sbjct: 125 PRATDNIVEMTEIIEKLIGNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARIAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKK+P DF+LWK S+ EPGWESPWGRGRPGWHIECSAMS YLG VFDIHGGGLDLIF
Sbjct: 185 AHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGNVFDIHGGGLDLIF 244
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E AN+W+HNGFL +EGRKMSKS GNF+TI+ELL T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANVWMHNGFLQVEGRKMSKSEGNFVTIHELLHTETFGGRKW 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+++RL EAE LL+KWP D +VL+AL +DLNTV
Sbjct: 305 PGQVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPAAEVGDAAPDESVLNALSDDLNTV 364
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+A+QALH LA+ + + +F A+A +LG+ K +++ ++ A++ LV RL +LK
Sbjct: 365 AAVQALHALAQAAHTDPTASAVFAATADLLGLLPKKMEIDEAVASAVDALVAMRLEMLKA 424
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR +L +KG L+D K+ G+R+T W+ K
Sbjct: 425 KNFTEADKIRDELTAKGIQLKDGKDAVTGERVTTWEVK 462
>gi|227821436|ref|YP_002825406.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
gi|227340435|gb|ACP24653.1| cysteinyl-tRNA synthetase [Sinorhizobium fredii NGR234]
Length = 463
Score = 447 bits (1151), Expect = e-123, Method: Composition-based stats.
Identities = 270/459 (58%), Positives = 344/459 (74%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K+YNTL R+ +F+ IDP N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 1 MPTLKLYNTLTREKADFRPIDPLNVRMYVCGPTVYDYAHIGNARPIIVFDVLFRLLRHVY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
GE VTY RNITD+DDKI RA +++P +P+N+AI +T K QF+ D T L CL PT
Sbjct: 61 GESRVTYARNITDVDDKINARALRDYPGLPLNEAIRRVTEKTETQFLDDATVLGCLEPTV 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPRAT I +M+ +I+ ++ GHAY+A E++FDT S+ +YG SRR +DEQ+ G RV
Sbjct: 121 QPRATESIAEMVEIIEKLLAKGHAYQAEGEVLFDTKSMRDYGQLSRRNLDEQQAGARVAV 180
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ HKKNP DF+LWK S EPGW+SPWGRGRPGWHIECSAMS YLG VFDIHGGGLDLI
Sbjct: 181 EAHKKNPGDFVLWKLSQEHEPGWDSPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLI 240
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA + AN+W+HNGFL +EGRKMSKS GNF+TI ELL T+KFGGR
Sbjct: 241 FPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLHTEKFGGRQ 300
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
WP V+RLAMLMTHYREPIDF+++RL EAE LLS+WP + G D A+++AL +DLNT
Sbjct: 301 WPGEVLRLAMLMTHYREPIDFSIKRLEEAEHLLSRWPVPGEAAGEADAAIVAALADDLNT 360
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
V+AIQALH LA++++ + L F ASA +LG+ + L+ + I+ V+ RL LLK
Sbjct: 361 VAAIQALHALAQKASVDAQYLGAFAASAALLGVLPKEIELDVAVVEEIDGRVRARLELLK 420
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD IR L ++G L+D K+P+ G+R+T W+ K
Sbjct: 421 AKNYAEADAIRADLLARGIQLKDGKDPETGERVTTWEVK 459
>gi|315121767|ref|YP_004062256.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495169|gb|ADR51768.1| cysteinyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 461
Score = 447 bits (1150), Expect = e-123, Method: Composition-based stats.
Identities = 373/460 (81%), Positives = 418/460 (90%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+K IK+YNTL+R+ EFQAIDPSN+RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR++
Sbjct: 1 MQKNIKLYNTLKRETIEFQAIDPSNVRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRHH 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YGE+CVTYVRNITDIDDKIIERAR++HPSI I++AI +IT KN +QF+ DTT+L CL PT
Sbjct: 61 YGEQCVTYVRNITDIDDKIIERARRDHPSIAIDNAICMITEKNIKQFILDTTKLGCLIPT 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
HQPRAT +IPQMI LI+ II HGHAYE+NNEI+FDT+S PNYGS S+RKIDEQK G RVP
Sbjct: 121 HQPRATEYIPQMINLIEKIISHGHAYESNNEILFDTNSAPNYGSLSQRKIDEQKTGARVP 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
EKYHKKNPADF+LWK S+ EPGWESPWG GRPGWHIECSAMSS++LGK+FDIHGGGLDL
Sbjct: 181 EKYHKKNPADFVLWKTSSEEEPGWESPWGIGRPGWHIECSAMSSYHLGKLFDIHGGGLDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQSCCA R +K AN+WIHNGFLNLEG KMSKSNGNFITINELLETKKFGG+
Sbjct: 241 IFPHHENEIAQSCCAYRTDKIANVWIHNGFLNLEGHKMSKSNGNFITINELLETKKFGGQ 300
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+WPAPVIRLAMLMT YREPIDFTVQRL EAEILLSKWP T+ S+G DPAVLSAL+NDLN
Sbjct: 301 AWPAPVIRLAMLMTSYREPIDFTVQRLQEAEILLSKWPPTTESRGKPDPAVLSALFNDLN 360
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
TVSAIQALHKLARES KN DLLP FNASA+ILGIEV +E L+KN+SIAIEKLVQERL+LL
Sbjct: 361 TVSAIQALHKLARESIKNPDLLPTFNASANILGIEVREEPLSKNLSIAIEKLVQERLLLL 420
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K+K FS+AD IR+QLE KGF+LEDYK+P + QRMTRWKQK
Sbjct: 421 KIKNFSAADSIREQLECKGFVLEDYKDPKSKQRMTRWKQK 460
>gi|15888416|ref|NP_354097.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
gi|24418698|sp|Q8UGG4|SYC_AGRT5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15156102|gb|AAK86882.1| cysteinyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
Length = 461
Score = 446 bits (1147), Expect = e-123, Method: Composition-based stats.
Identities = 276/460 (60%), Positives = 342/460 (74%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++K++NTL R+ +EF ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+
Sbjct: 1 MSLRLKLHNTLTREKSEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHV 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YGE VTY RNITD+DDKI RA +++P +P+NDAI +T K QF D L CL PT
Sbjct: 61 YGEDHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHDDVAALGCLQPT 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT++I +MIYLI+ +I GHAY+A E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 121 VEPRATDYIAEMIYLIERLIERGHAYKAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ HKKNP DF+LWK S+ EPGWESPWG GRPGWHIECSAM+ YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKNPGDFVLWKLSSESEPGWESPWGLGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTHVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTDKFGGR 300
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
WP V+RLAMLMTHYREPIDF+V+RL EAE LLSKWP TS D VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLSKWPAAETSDAAADETVLEALADDLN 360
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
TV+A+QALH LA + + LP F ASA +LG+ K +++ I A++ LV+ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPSRLPAFAASAALLGVLPKKTEMDEAIVSAVDALVELRLEML 420
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K K F+ AD +R +L KG L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460
>gi|325292453|ref|YP_004278317.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
gi|325060306|gb|ADY63997.1| Cysteinyl-tRNA synthetase [Agrobacterium sp. H13-3]
Length = 461
Score = 445 bits (1145), Expect = e-123, Method: Composition-based stats.
Identities = 275/460 (59%), Positives = 342/460 (74%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++K++NTL R+ TEF ID N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+
Sbjct: 1 MSLRLKLHNTLTREKTEFAPIDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHV 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YGE VTY RNITD+DDKI RA +++P +P+NDAI +T K QF +D L CL PT
Sbjct: 61 YGESHVTYARNITDLDDKINARALRDYPHLPLNDAIHAVTKKTADQFHEDVAALGCLQPT 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT++I +MI +I+ +I GHAY A E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 121 VEPRATDYIAEMIDIIEKLIARGHAYAAGGEVLFDTRSMADYGQLSKRPLDEQQAGARVA 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ HKK P DF+LWK S+ EPGWESPWGRGRPGWHIECSAM+ YLG+VFDIHGGGLDL
Sbjct: 181 VEAHKKTPGDFVLWKLSSDNEPGWESPWGRGRPGWHIECSAMAGRYLGEVFDIHGGGLDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA + AN+W+HNGF+ +EGRKMSKS GNF+TI ELL T+KFGGR
Sbjct: 241 IFPHHENEIAQSRCAHGTQVMANVWMHNGFVQVEGRKMSKSEGNFVTIYELLHTEKFGGR 300
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
WP V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP S D VL AL +DLN
Sbjct: 301 QWPGEVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAAEASDAAPDETVLDALADDLN 360
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
TV+A+QALH LA + + LP F ASA +LG+ K +++ I A++ LVQ RL +L
Sbjct: 361 TVAAVQALHALAHAANTDPARLPAFAASAALLGVLPKKAEVDEAIVSAVDALVQLRLEML 420
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K K F+ AD +R +L KG L+D K+ + G+R T W+ K
Sbjct: 421 KAKNFAEADRLRDELSEKGIQLKDGKDKETGERTTTWELK 460
>gi|254504528|ref|ZP_05116679.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
gi|222440599|gb|EEE47278.1| cysteinyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
Length = 475
Score = 441 bits (1133), Expect = e-121, Method: Composition-based stats.
Identities = 267/462 (57%), Positives = 334/462 (72%), Gaps = 4/462 (0%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +K+ NTL R+ +F AID SN+R+YVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 13 KGLKLTNTLTRQKEDFCAIDDSNVRLYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P+N+AI+++T K Q+ KD L CL PT Q
Sbjct: 73 AEHVTYARNITDVDDKINARALRDYPDMPLNEAIALVTKKTADQYQKDVAALGCLEPTVQ 132
Query: 123 PRATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
PRAT HI M+ +I+ +I GHAY E++FDT S+PNYG S+RK+DEQ G R
Sbjct: 133 PRATEHIDGMVKMIEQLIEKGHAYVAETPEGGEVLFDTVSMPNYGGLSKRKLDEQIAGAR 192
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECS MS H+LGKVFDIHGGGL
Sbjct: 193 IAVDSHKKNPGDFVLWKLSSPEEPGWDSPWGRGRPGWHIECSVMSEHHLGKVFDIHGGGL 252
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQSCCA+ + +N W+HNGF+ +EGRKMSKS GNF TI+ELLET+ FG
Sbjct: 253 DLIFPHHENEIAQSCCANGTKTMSNYWVHNGFVQVEGRKMSKSEGNFFTIHELLETENFG 312
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
GR WP V+RLAMLMTHY+EPIDF+V++L EAE LL KWP + VL A+ +D
Sbjct: 313 GRKWPGEVLRLAMLMTHYKEPIDFSVRKLEEAENLLGKWPDLVETDAAPAADVLDAMNDD 372
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
LNT +AIQALH LA E+ K+ L F+ASA +LG++ ++ AI + RL
Sbjct: 373 LNTAAAIQALHGLAGEANKDPHKLAEFSASAALLGLKPVAADMSGIDETAIATAITARLE 432
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
L K ++ AD IR +L S+G L+D K+ + G R+T W K
Sbjct: 433 ALNGKNWAEADRIRDELASQGIALKDSKDSETGARVTTWDLK 474
>gi|319784480|ref|YP_004143956.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317170368|gb|ADV13906.1| cysteinyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 478
Score = 431 bits (1109), Expect = e-119, Method: Composition-based stats.
Identities = 258/476 (54%), Positives = 328/476 (68%), Gaps = 20/476 (4%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YNTL R +F IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5 SQGLRLYNTLTRTKEDFVPIDPLNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEH------PSIPINDAISIITSKNTQQFVKDTTRLA 115
G+ VTYVRNITD+DDKI RA ++ ++ +N+AI +T K QF D L
Sbjct: 65 GQTHVTYVRNITDVDDKINARALRDFGGEIASGTLSLNEAIRRVTEKTADQFHSDVAVLG 124
Query: 116 CLAPTHQPRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
CL PT +PRAT + MI LIQ++I GHAY A E++FDT+S+P+YG S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKVDMITLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKR 184
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+DEQ+ G RV HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWNSPWGRGRPGWHIECSAMSAAYLG 244
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+VFDIHGGGLDLIFPHHENEIAQS CA E ANIW+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTEMMANIWMHNGFLQVEGQKMSKSLGNFYSI 304
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSK 344
NELLET+ FGGR WP V+RLAMLMTHYREPIDF+V++L EAE L KW + T+
Sbjct: 305 NELLETETFGGRKWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRGADLAPTAA 364
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
G + ++ AL +DL T +A Q L +LA E+ +D AS LG +V +++
Sbjct: 365 GQVPVEIIDALSDDLATYAAFQVLTQLAGEAMDGNDAAASLKASLLFLGFDVASAKVDEG 424
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ K + +RL + K ++ AD IR L ++G L+D K+P G+R+T W+ K
Sbjct: 425 ---HVGKAIAKRLAFIAAKSWAEADRIRDDLLAQGIQLKDGKDPVTGERITTWEVK 477
>gi|190891109|ref|YP_001977651.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 652]
gi|229558782|sp|B3PUS4|SYC_RHIE6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|190696388|gb|ACE90473.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
Length = 463
Score = 431 bits (1109), Expect = e-118, Method: Composition-based stats.
Identities = 266/458 (58%), Positives = 344/458 (75%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PELKLYNTLTREKSVFAPIDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+N+AI +T K QF D L CL P +
Sbjct: 65 ESHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 125 PRATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS YLG +FDIHGGGLDLIF
Sbjct: 185 AHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIF 244
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKW 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T D AV++AL +DLNTV
Sbjct: 305 PGAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAKPDEAVMNALADDLNTV 364
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+A+QALH LA+ + + + F A+A +LG+ K +++ ++ A++ LV RL +LK
Sbjct: 365 AAVQALHALAQAAHTDAAVGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAIRLEMLKA 424
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR +L +KG L+D K+ G+R+T W+ K
Sbjct: 425 KNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462
>gi|327187990|gb|EGE55220.1| cysteinyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
Length = 463
Score = 428 bits (1101), Expect = e-118, Method: Composition-based stats.
Identities = 267/458 (58%), Positives = 343/458 (74%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+N+AI +T K QF D L CL P +
Sbjct: 65 ESHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 125 PRATDNIEEMIEIIEKLISNGHAYVASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS YLG +FDIHGGGLDLIF
Sbjct: 185 AHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIF 244
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E AN+W+HNGF+ +EGRKMSKS GNF+TI++LL T+ FGGR W
Sbjct: 245 PHHENEIAQSRCAHGTEVMANVWMHNGFVQVEGRKMSKSEGNFVTIHDLLHTETFGGRKW 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
P V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T D AV++AL +DLNTV
Sbjct: 305 PGAVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDASPDEAVMNALADDLNTV 364
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+A+QALH LA+ + + + F A+A +LG+ K +++ ++ A++ LV RL +LK
Sbjct: 365 AAVQALHALAQAAHTDAAIGATFAATAFLLGVLPKKAEIDEAVAAAVDALVAMRLEMLKA 424
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR QL +KG L+D K+ G+R+T W+ K
Sbjct: 425 KNFAEADKIRDQLTTKGIQLKDGKDAATGERVTTWEVK 462
>gi|192290599|ref|YP_001991204.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
gi|229558783|sp|B3QCS4|SYC_RHOPT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|192284348|gb|ACF00729.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
Length = 491
Score = 427 bits (1097), Expect = e-117, Method: Composition-based stats.
Identities = 230/489 (47%), Positives = 305/489 (62%), Gaps = 34/489 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL R F IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA +++P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 EAHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I+ ++ G AY + ++F S++ P YGS + R +DE
Sbjct: 121 PRATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP---WGRGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA ++ A W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTKRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGII 347
T KFGGRSW +RLAML THYR+PID+TV L EA+ ++K+ +T +
Sbjct: 301 ATNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALEEAQKRVAKYRRTLERFRGGKNVEV 360
Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPIFNASAHIL 392
V+SAL +DLNT +AI L L R + N AS +L
Sbjct: 361 PHGVVSALSDDLNTHAAITELDALNRRANGVTHEGPTSEADALAANAIAADELRASLRLL 420
Query: 393 GIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
GI V E +N+ I++L+ R K + +D IR +L + G +L+D K+ D
Sbjct: 421 GISVASERSGAVNQIFDQNIQRLIAVRTAARANKDWKESDRIRDELAAMGVVLKDGKDAD 480
Query: 450 NGQRMTRWK 458
+T W+
Sbjct: 481 GKP-VTTWE 488
>gi|237808667|ref|YP_002893107.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
gi|259511845|sp|C4LG04|SYC_TOLAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|237500928|gb|ACQ93521.1| cysteinyl-tRNA synthetase [Tolumonas auensis DSM 9187]
Length = 463
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 179/484 (36%), Positives = 254/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVVRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITD+DDKII+RA + ++ +T + D L P +P
Sbjct: 61 --VTFVRNITDVDDKIIKRAAENA------ESCDALTERLIGDMHADFDALKLQRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L+Q+++ +AY + +++F S P YG S + I++ + G RV +
Sbjct: 113 RATQHIGEIITLVQSLLDQNYAYVADSGDVLFSIDSFPEYGRLSGQNIEQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ESKRNPMDFVLWKMSKPGEPMWDSPWGAGRPGWHIECSAMNSKHLGHHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHHT-PYVNTWMHSGMVMVDEEKMSKSLGNFFTIRDVL-------KVY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAVL 352
A +R ++ HYR P++++ L +A L + D
Sbjct: 285 DAETVRYFLMSGHYRSPLNYSDLNLQQARASLERLYTALRGVEDGEEQAALSAPFDERFK 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH---- 400
+A+ +D NT A L LAR+ + L +LG+ +
Sbjct: 345 AAMDDDFNTPEAYSVLFDLARDLNRAKQDSPADAVALAACLRRLGGVLGLLQQQPEQFLQ 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ IE L++ R K ++ AD R +L G +LED G + T
Sbjct: 405 SGAAAETDDVAEIELLIKTRNDARASKNWALADEARNKLTEMGIVLED------GPQGTT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|39935066|ref|NP_947342.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
gi|61216212|sp|Q6N8A7|SYC_RHOPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|39648917|emb|CAE27438.1| cysteine-tRNA ligase [Rhodopseudomonas palustris CGA009]
Length = 463
Score = 424 bits (1091), Expect = e-116, Method: Composition-based stats.
Identities = 223/467 (47%), Positives = 296/467 (63%), Gaps = 18/467 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL R F IDP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLTRDKRPFTPIDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA +++P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 EAHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I+ ++ G AY + ++F S++ P YGS + R +DE
Sbjct: 121 PRATEHIGEMRSIIEKLVAGGFAYVEQDHVLFSPSAMNAANGVLPRYGSLANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP---WGRGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA E+ A W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTERMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPAV 351
T KFGGRSW +RLAML THYR+PID+TV L EAE + W + + V
Sbjct: 301 ATNKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSDFAKDATPVRCDEV 360
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
++AL +DLNT I LH L R + +LGI ++ +
Sbjct: 361 IAALTDDLNTPKMIAELHALRRAG-----KADELRGAMQLLGINPVV-RAPVDLDATAKS 414
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L++ R K + +D IR +L + G +L+D K+ +G+ +T W+
Sbjct: 415 LIEARTAARANKDWKESDRIRDELAAMGVVLKDGKD-ADGKSVTTWE 460
>gi|114320961|ref|YP_742644.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|114227355|gb|ABI57154.1| cysteinyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 485
Score = 424 bits (1089), Expect = e-116, Method: Composition-based stats.
Identities = 180/484 (37%), Positives = 259/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+N+L ++ F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+
Sbjct: 24 MLHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY- 82
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII RA + + + + +T + + +D L L P H+P
Sbjct: 83 -RVTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEP 135
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I +I+ ++ GHAY + ++ F SS P YG S + ++ + G RV
Sbjct: 136 RATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVD 195
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+ LG FDIHGGGLDL F
Sbjct: 196 EGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKF 255
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+HNG + + KM+KS GNF T+ E+L +
Sbjct: 256 PHHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------ 308
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
A +RL +L +HYR P+++++ L +A+ L +
Sbjct: 309 -AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEADPQGFRARFH 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH--- 400
+A+ +D NT A+ L +LARE + + +LG+
Sbjct: 368 AAMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFL 427
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ I+ LV R K + F+ AD IR +L +G ILED G + T
Sbjct: 428 RGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGTT 481
Query: 457 WKQK 460
W+++
Sbjct: 482 WRRE 485
>gi|222085422|ref|YP_002543952.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
gi|254765171|sp|B9JCA5|SYC_AGRRK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|221722870|gb|ACM26026.1| cysteinyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
Length = 463
Score = 423 bits (1088), Expect = e-116, Method: Composition-based stats.
Identities = 274/459 (59%), Positives = 343/459 (74%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++K+YNTL R+ +FQ ID N+R+YVCGPTVYDFAHIGNARP IVFDVL+RLLR Y
Sbjct: 4 EPQLKLYNTLTREKVDFQPIDRENVRLYVCGPTVYDFAHIGNARPAIVFDVLFRLLRQVY 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
GE VTY RNITD+DDKI RA ++HP +P+N+AI ++T K Q+ +DTT L CL PT
Sbjct: 64 GENHVTYARNITDVDDKINARALRDHPGLPLNEAIRLVTEKTETQYYQDTTALGCLEPTV 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPRAT++I QMI +I+ +I GHAY+A E++FDT S+ +YG S+R +DEQ+ G R+
Sbjct: 124 QPRATDNIAQMIEIIEKLIARGHAYQAAGEVLFDTKSMADYGQLSKRNLDEQQAGARIAV 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
HKK+P DF+LWK S EPGWESPWGRGRPGWHIECSAMS YLG VFDIHGGGLDLI
Sbjct: 184 DAHKKSPGDFVLWKLSAENEPGWESPWGRGRPGWHIECSAMSGRYLGDVFDIHGGGLDLI 243
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA + AN+W+HNGFL +EGRKMSKS GNF+TI ELL+T+K GGR+
Sbjct: 244 FPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGRKMSKSEGNFVTIYELLQTEKLGGRT 303
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
WP V+RLAMLMTHYREPIDF+V+RL EAE LL+KWP D VL AL +DLNT
Sbjct: 304 WPGAVLRLAMLMTHYREPIDFSVKRLEEAERLLAKWPAADIGNAKPDATVLVALADDLNT 363
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
V AIQALH LA+ + + +LP+F ASA +LG+ K ++ ++ I+ V+ RL LLK
Sbjct: 364 VVAIQALHALAQAANADASILPVFAASAALLGLLPEKVEMDDAVASEIDARVRARLELLK 423
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR L ++G L+D K+P G+R+T W+ K
Sbjct: 424 AKNFAEADKIRDTLLAEGIQLKDGKDPATGERITTWEVK 462
>gi|187631658|sp|Q0A7N3|SYC_ALHEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 462
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 180/484 (37%), Positives = 259/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+N+L ++ F+ I P ++RMYVCG TVYD+ H+G+AR ++VFD++ R LR+
Sbjct: 1 MLHIHNSLTQRKERFEPIQPGHVRMYVCGMTVYDYCHLGHARALVVFDMVARYLRHLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII RA + + + + +T + + +D L L P H+P
Sbjct: 60 -RVTFVRNITDIDDKIIRRAAE------LGEPMGAVTERFIRAMHEDAEALGVLPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I +I+ ++ GHAY + ++ F SS P YG S + ++ + G RV
Sbjct: 113 RATGHIDDIIAMIERLVERGHAYVADDGDVYFAVSSYPEYGKLSGERQEDLRAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W SPWG GRPGWHIECSAMS+ LG FDIHGGGLDL F
Sbjct: 173 EGKRDPVDFALWKAARPGEPAWPSPWGEGRPGWHIECSAMSTQVLGDHFDIHGGGLDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+HNG + + KM+KS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSECATG-HPFVNYWMHNGHVRINDEKMAKSLGNFFTVREVLSEHR------ 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
A +RL +L +HYR P+++++ L +A+ L +
Sbjct: 286 -AEAVRLFLLSSHYRSPLNYSLDGLRQAQGALERLYLALRGLPEAPVPEADPQGFRARFH 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH--- 400
+A+ +D NT A+ L +LARE + + +LG+
Sbjct: 345 AAMDDDFNTPEALAVLFELAREVNRLRQGDDDAGAAAPGALLRVLGGVLGLLQDDPERFL 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ I+ LV R K + F+ AD IR +L +G ILED G + T
Sbjct: 405 RGGDAGGDEDAEIDALVARRTEARKNRDFAEADRIRDELAERGIILED------GPQGTT 458
Query: 457 WKQK 460
W+++
Sbjct: 459 WRRE 462
>gi|53805250|ref|YP_113028.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|61216155|sp|Q60BG8|SYC_METCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|53759011|gb|AAU93302.1| cysteinyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 465
Score = 423 bits (1087), Expect = e-116, Method: Composition-based stats.
Identities = 186/487 (38%), Positives = 263/487 (54%), Gaps = 52/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ ++P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR+
Sbjct: 1 MLKIYNSLTRQKEEFRPLEPRRVRMYVCGMTVYDYCHLGHARVMVVFDMVARYLRHLG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN+TDIDDKII RA + + I +T++ + +D L L P H+P
Sbjct: 59 LKVTYVRNVTDIDDKIIRRAVENG------ETIGALTARFIEAMHEDERALGVLPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++ +I +I GHAY +N ++ + +S PNYG S + +DE + G R+
Sbjct: 113 RATESIDDILAMIGTLIERGHAYVGSNGDVFYAVASFPNYGRLSGKNLDELRAGERIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG+DL F
Sbjct: 173 EAKRDPLDFVLWKSAKPGEPFWASPWGPGRPGWHIECSAMSTRCLGAHFDIHGGGMDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ + KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEGATGEH-FVNYWMHNGFVRINEEKMSKSLGNFFTVREILAR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDP 349
V+R +L +HYR P++++ + L EA LS+
Sbjct: 285 RPEVVRFFILNSHYRSPLNYSDENLDEAAAALSRLYTALRGLAPDLPLPLGEDRDEGFSS 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL 401
A+ +D NT AI L LARE + L + ++LG+
Sbjct: 345 RFADAMQDDFNTPEAIAVLFDLAREINRHKAAEPAKAAALGATLKSLGNVLGLLQTDPEA 404
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE ++ RL K K ++ +D IR +L+++G ILED
Sbjct: 405 YFKSDAGGSGLSDADIETRIRARLEARKAKNWAESDRIRDELKAQGIILEDS------AA 458
Query: 454 MTRWKQK 460
T W+++
Sbjct: 459 GTTWRRE 465
>gi|54297226|ref|YP_123595.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Paris]
gi|61216143|sp|Q5X5P9|SYC_LEGPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|53751011|emb|CAH12422.1| cysteine tRNA synthetase [Legionella pneumophila str. Paris]
Length = 456
Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 194/475 (40%), Positives = 261/475 (54%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L RK F ++ P I MYVCG TVYD H+G+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + S I +T++ DT L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIARASERGVS------IDELTAQYIDAMNNDTHALNILPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I LIQ ++ G+AY N ++ ++ + P YG S + I+ G+RV
Sbjct: 113 RATGHIETIIRLIQRLLEKGNAYVSDNGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + G KM+KS GNF TI ++L +
Sbjct: 233 PHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA-- 354
VIR +L +HYR P++++ + L A+ L + Q T+ +D
Sbjct: 285 HPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFN 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKN 404
+ +D NT A+ L +LA E K++ L A ILG L +
Sbjct: 345 QAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEE 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+ ERL + ++ AD IR L SKG LED G T W++
Sbjct: 405 EKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453
>gi|330810612|ref|YP_004355074.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
gi|327378720|gb|AEA70070.1| Cysteine--tRNA ligase [Pseudomonas brassicacearum subsp.
brassicacearum NFM421]
Length = 460
Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 176/479 (36%), Positives = 256/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+ +
Sbjct: 1 MLTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDI+DKII RAR+ + +T + + +D RL L P +P
Sbjct: 61 L--TYVRNITDIEDKIINRARENG------EPYDALTERMIKAMHEDEARLNILKPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M+ +IQ +I G+AY N ++ + + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++L+ +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVPAAGGEAFVARFTEV 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDLNAAAGLAARLKELASVLGVLQLEADDFLQAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|296447282|ref|ZP_06889211.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
gi|296255244|gb|EFH02342.1| cysteinyl-tRNA synthetase [Methylosinus trichosporium OB3b]
Length = 485
Score = 421 bits (1081), Expect = e-115, Method: Composition-based stats.
Identities = 232/488 (47%), Positives = 298/488 (61%), Gaps = 43/488 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EF+ IDP+N+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR YG +
Sbjct: 8 LKLYNTLTRVKEEFRPIDPANVRMYVCGPTVYDYAHIGNARPLIVFDVLFRLLRQLYGAE 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITD+DDKI RA + S I +T F D L CL P+ QPR
Sbjct: 68 HVTYVRNITDVDDKINARAAERGIS------IRELTEGTNAIFQADVAALGCLPPSVQPR 121
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QMI L++ +I GHAY A+ ++FD S+ +YG SRR +DE G RV +
Sbjct: 122 ATEHIAQMIALVEKLIASGHAYAADGHVLFDVPSMADYGRLSRRPLDEMIAGARVDVAPY 181
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ DF+LWK S EPGW+SPWGRGRPGWH+ECSAMS +LG+ FDIHGGG+DL+FPH
Sbjct: 182 KRGDMDFVLWKPSKDSEPGWDSPWGRGRPGWHLECSAMSWKHLGETFDIHGGGIDLVFPH 241
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ CA E AN W+HNGFL +EG KMSKS GNF+TI+ELL T+ FGGR WP
Sbjct: 242 HENEIAQTRCAFGHEVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTENFGGRKWPG 301
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIIDPAVLSA 354
V+RLAML THYR+PIDFTV+ L EAE L +W + G + A +
Sbjct: 302 EVLRLAMLRTHYRQPIDFTVKALEEAERTLLRWRRFVELALSLDDDISDFGPLPSAFMEY 361
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------------------IL 392
L +DLNT +A+ +H+LAR + +A IL
Sbjct: 362 LADDLNTPAALSRIHELARVGPTAALEWGEESTAASPVEQQIAAARLRAALSLLGLQTIL 421
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +++ S I++L++ R K ++ +D IR L + G L+D K+
Sbjct: 422 DPAWQRSSVDEAESDKIKELIERRRTARATKNWAESDRIRDALAAMGVALKDNKDGT--- 478
Query: 453 RMTRWKQK 460
T W+ K
Sbjct: 479 --TTWEVK 484
>gi|253689302|ref|YP_003018492.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511839|sp|C6DAX2|SYC_PECCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|251755880|gb|ACT13956.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 461
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 173/483 (35%), Positives = 251/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TDIDDKII+RA + + +T++ + D L L P +P
Sbjct: 60 -SLKYVRNVTDIDDKIIKRAAENG------ETSDQLTTRMIAEMHADFDALNILRPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I +++ +I HAY +N +++F + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHITDIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYTALRGTDPDAAAQGGDEFEGRFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDAQAANQLASALRKLSGVLGLLEQDPEQFLQN 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ + IE L+Q+R K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|224825711|ref|ZP_03698815.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
gi|224601935|gb|EEG08114.1| cysteinyl-tRNA synthetase [Lutiella nitroferrum 2002]
Length = 457
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 184/478 (38%), Positives = 259/478 (54%), Gaps = 44/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F+ I P MYVCG TVYD+ H+G+AR ++VFD++ R LR +
Sbjct: 1 MLNLYNTLTRQKEVFKPITPGKASMYVCGMTVYDYCHLGHARMVVVFDMVARWLRATGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII+RA + + I +T++ +D L + P +P
Sbjct: 61 L--TYVRNITDIDDKIIKRAAENG------EPIQALTARFIDAMNEDFDALGVIHPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P MI LI+ +I +G AY N ++ + P YG S + +++ + G RV
Sbjct: 113 RATEHVPGMIALIETLIANGRAYPAPNGDVYYAVREFPGYGKLSGKSLEDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W SPWG GRPGWHIECS MS H+LG+ FDIHGGG DL F
Sbjct: 173 VNKRDPFDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSVMSEHHLGEHFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEGAHN-HDFVNYWLHNGFIRVDNEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
A V+R +L HYR P++++ L +A+ L++ +
Sbjct: 285 DAEVVRFFILRAHYRSPLNYSDVHLDDAKQSLTRLYTALKNVTATDIAIDWEENDYARRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEH--------L 401
A+ +D NTV A+ L LA E + + A +LG+
Sbjct: 345 RQAMDDDFNTVEAMAVLFDLAGEVNRGESAAQAGLLKALGAVLGLLQRAPQEFLQGGSTA 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + AIE L+Q R K ++ +D IR +L +KG ILED G + T W++
Sbjct: 405 AELSADAIEALIQARRDARTAKNWAESDRIRDELAAKGVILED------GAQGTTWRR 456
>gi|204930486|ref|ZP_03221416.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
gi|204320420|gb|EDZ05623.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Javiana str. GA_MM04042433]
Length = 461
Score = 419 bits (1078), Expect = e-115, Method: Composition-based stats.
Identities = 178/483 (36%), Positives = 257/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+Q+RL K K +++AD R +L G ILED G + T W
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWTAADAARDRLTEMGIILED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|52841538|ref|YP_095337.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|61216153|sp|Q5ZVY1|SYC_LEGPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|52628649|gb|AAU27390.1| cysteinyl-tRNA synthetase [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
Length = 456
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 261/475 (54%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L RK F ++ P I MYVCG TVYD H+G+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRKKEPFVSLKPGTIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + S I +T++ DT L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIARASERGVS------IDELTAQYIDAMNNDTHALNILPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I LIQ ++ G+AY N ++ ++ + P YG S + I+ G+RV
Sbjct: 113 RATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + G KM+KS GNF TI ++L +
Sbjct: 233 PHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVL---- 352
VIR +L +HYR P++++ + L A+ L + Q T +D
Sbjct: 285 HPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTEDSKLDEYWQVQFN 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKN 404
A+ +D NT A+ L +LA E K++ L A ILG L +
Sbjct: 345 QAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEE 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+ ERL + ++ AD IR L SKG LED G T W++
Sbjct: 405 EKLVIEQLIAERLQARAERNWAKADQIRADLLSKGIELED------GATGTTWRR 453
>gi|317047240|ref|YP_004114888.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
gi|316948857|gb|ADU68332.1| cysteinyl-tRNA synthetase [Pantoea sp. At-9b]
Length = 461
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 253/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLTRQKEEFKPIHAGEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++I +T++ + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESIETLTNRMIGEMHKDFAALGILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L+ +I GHAY N +++FD S +YG SR+ +++ + G RV
Sbjct: 113 RATRHIDEIIELVGRLIERGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEVAQSTCAHD-GPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR +++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDVSAVAAGGEEFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L A +LGI
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDKTAADALAAKLRQLAEVLGILQQDPEQFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L++ R + K ++ AD R +L + G +LED G + T W
Sbjct: 405 GAQANDDEVAEIEALIKMRNDARQAKDWAQADVARDKLNALGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|229591304|ref|YP_002873423.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
gi|259511840|sp|C3JYD3|SYC_PSEFS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229363170|emb|CAY50215.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens SBW25]
Length = 462
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 176/479 (36%), Positives = 252/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+ +
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + ++ +T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ESFDALTERMIAAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPSVAPAGGEAFVARFTEV 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKEHL----- 401
+ +D T A L ++ RE + + A +LG+ K
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMKPEDFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + ++ L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGRVDAAEVDALIQARLAARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|61216275|sp|Q7NX82|SYC_CHRVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 457
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 181/478 (37%), Positives = 263/478 (55%), Gaps = 44/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F+ I+P + MYVCG TVYD HIG+AR + FDV+YR L+ +
Sbjct: 1 MLSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDI+DKII+RA + + + + +D L L PTH+P
Sbjct: 61 --VNYVRNITDIEDKIIKRALERGIT------PEQLVEETIADMRQDAAALGLLPPTHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+H+ M+ +I+ +I +G AY AN ++ + YG S R +D+ + G RV
Sbjct: 113 RATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL F
Sbjct: 173 PNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+N++G KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSEGAHG-HQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVL-------QHF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
VIR ++ +HYR P+++T L +A+ L++
Sbjct: 285 DGEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-------- 401
+A+ +D T A+ L +LA E K+ D L + +LG+ +
Sbjct: 345 KAAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVGE 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + +E L+Q R K ++ +D IR +L +KG +LED G T W++
Sbjct: 405 GELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED------GAGGTIWRR 456
>gi|284048089|ref|YP_003398428.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952310|gb|ADB47113.1| cysteinyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 481
Score = 419 bits (1077), Expect = e-115, Method: Composition-based stats.
Identities = 176/502 (35%), Positives = 251/502 (50%), Gaps = 65/502 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YN + R+ EF + P + +YVCG T Y+ HIGNARP +V+D + R L +
Sbjct: 1 MSIRVYNDMTRQKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDTIRRFLDHEGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TD+DDKII A +E + +I ++ + + + +L
Sbjct: 61 D--VTYVQNFTDVDDKIIRAANEEGVT------WDVIANRYIKAYFEVMDKLHVKRAHIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + HIP +I+ +Q +I +G+ Y + ++ + +YG S RK+D+ G RV
Sbjct: 113 PRVSEHIPDIIHTVQELINNGYGYVVDGDVYYRVERFSHYGELSGRKLDDMMAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG D HGGG DLIF
Sbjct: 173 ERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGNTLDFHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+ + KMSKS GNF T+ +LL + +
Sbjct: 233 PHHENEIAQSEGATGVHPFVRYWVHNGFITINEEKMSKSLGNFKTVYDLL-------KEY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
IR +L THYR P+DF+ +RL EA L + +
Sbjct: 286 EPETIRYFILNTHYRSPLDFSQERLAEAGRSLERLRTAQNNLQEIQQVITVGPDAESLAL 345
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
+ A+ +D NT AI L LA+E H+ +
Sbjct: 346 RDKVEELRKGFFDAMSDDFNTSLAISYLFALAKEINVYHNAIISGAKKPDGKLVEQIDKA 405
Query: 385 FNASAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ ++GI + N N I ++ER K + F+ AD IR +L +K
Sbjct: 406 WKEMIGVIGILENQPAANGEGGAVSNEEAEIAARIEERQAARKARDFAKADAIRDELAAK 465
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G ILED + RWK+K
Sbjct: 466 GIILEDT------PQGVRWKRK 481
>gi|34497201|ref|NP_901416.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
gi|34103057|gb|AAQ59420.1| cysteinyl-tRNA synthetase [Chromobacterium violaceum ATCC 12472]
Length = 459
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 181/478 (37%), Positives = 263/478 (55%), Gaps = 44/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F+ I+P + MYVCG TVYD HIG+AR + FDV+YR L+ +
Sbjct: 3 MLSLYNTLTRQKEAFKPIEPGKVSMYVCGMTVYDLCHIGHARMLAAFDVIYRWLKASGYD 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDI+DKII+RA + + + + +D L L PTH+P
Sbjct: 63 --VNYVRNITDIEDKIIKRALERGIT------PEQLVEETIADMRQDAAALGLLPPTHEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+H+ M+ +I+ +I +G AY AN ++ + YG S R +D+ + G RV
Sbjct: 115 RATHHVGGMVAMIEQLIANGKAYPAANGDVYYAVREFEGYGKLSGRTLDKLRAGERVEVD 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS H+LG+ FDIHGGG DL F
Sbjct: 175 PNKRDPLDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSVMSCHHLGEHFDIHGGGEDLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+N++G KMSKS GNF TI ++L + +
Sbjct: 235 PHHENEIAQSEGAHG-HQYVNYWLHNGFINVDGEKMSKSLGNFFTIRDVL-------QHF 286
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
VIR ++ +HYR P+++T L +A+ L++
Sbjct: 287 DGEVIRFFIVRSHYRSPVNYTDSILNDAKHGLTRLYTALRGIELPTSDGIDWNHAYAARF 346
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-------- 401
+A+ +D T A+ L +LA E K+ D L + +LG+ +
Sbjct: 347 KAAMDDDFGTSEAVAVLFELAGEVNKSRDPQLARLLKDLGGVLGLLTRDPEVFLQGGVGE 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + +E L+Q R K ++ +D IR +L +KG +LED G T W++
Sbjct: 407 GELSAEQVEALIQARKDARAAKDWAESDRIRDELTAKGIVLED------GAGGTIWRR 458
>gi|330963331|gb|EGH63591.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 460
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 257/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ ++T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDVLTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIEKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ DP +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAADPAGGEAFVERFTAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRETDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AQGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|330503048|ref|YP_004379917.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
gi|328917334|gb|AEB58165.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina NK-01]
Length = 461
Score = 419 bits (1076), Expect = e-115, Method: Composition-based stats.
Identities = 188/480 (39%), Positives = 261/480 (54%), Gaps = 46/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL + F+ ++ +++RMYVCG TVYDF HIG+AR M+ FDV+ R LR
Sbjct: 1 MALSIYNTLSKVKEPFKPLEGNSVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII+RA + + + + +D RL L P +
Sbjct: 61 D--VTYVRNITDIDDKIIKRANENG------EPFEALVERMIAAMHEDEARLNVLRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI M +IQ +I G AY N ++ + + YG SRRKIDE K+G R+
Sbjct: 113 PRATGHIAGMHQMIQTLIDKGFAYAPGNGDVYYRVTKFETYGKLSRRKIDELKIGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + P EP WESPWG+GRPGWHIECS MS+ LG+ FDIHGGG DL+
Sbjct: 173 DEIKEDPLDFVLWKAAKPGEPSWESPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A ++ AN W+H G + ++G KMSKS GNF TI E+LE
Sbjct: 233 FPHHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------TSTSKGIIDPAVLS 353
+ V+R ++ +HYR PI+++ + L EA+ L ++ S
Sbjct: 285 YHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAFVERFGS 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------ 399
A+ +D N+ A L ++ RE + + L A +LG+ +
Sbjct: 345 AMDDDFNSPEACAVLFEMIREVNRLRESDLQAAAGLAAQLKQLASVLGVLQLEPDAFLQA 404
Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+ RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 GAAGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 458
>gi|148358849|ref|YP_001250056.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
gi|187629845|sp|A5IBG0|SYC_LEGPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148280622|gb|ABQ54710.1| cysteinyl-tRNA synthetase [Legionella pneumophila str. Corby]
Length = 456
Score = 418 bits (1075), Expect = e-115, Method: Composition-based stats.
Identities = 194/475 (40%), Positives = 260/475 (54%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L RK F ++ P I MYVCG TVYD H+G+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + S I +T++ DT L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIARASERDVS------IDELTAQYIDAMNNDTHALNILPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I LIQ ++ G AY N ++ ++ + P YG S + I+ G+RV
Sbjct: 113 RATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + G KM+KS GNF TI ++L +
Sbjct: 233 PHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA-- 354
VIR +L +HYR P++++ + L A+ L + Q T+ +D
Sbjct: 285 HPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFN 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKN 404
+ +D NT A+ L +LA E K++ L A ILG L +
Sbjct: 345 QAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEE 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+ ERL + ++ AD IR L SKG LED G T W++
Sbjct: 405 EKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED------GATGTTWRR 453
>gi|330878748|gb|EGH12897.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. morsprunorum
str. M302280PT]
Length = 460
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 257/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ ++P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAVEPAGGEAFVERFTAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRETGVTAAAGLAARLKQLACVLGVLQLEADDFLRAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AQGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|225181302|ref|ZP_03734747.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225168082|gb|EEG76888.1| cysteinyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 469
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 176/493 (35%), Positives = 262/493 (53%), Gaps = 59/493 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL RK EF ++ + +Y CGPTVYD+ HIGNAR IVFDV+ R LR+
Sbjct: 1 MSVRVFNTLTRKKEEFVPVEGKKVGIYACGPTVYDYFHIGNARIFIVFDVIRRYLRWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V+N TDIDDK+I+RA + ++P + + + + +D L
Sbjct: 61 D--VTFVQNFTDIDDKMIKRANELGITVP------ELAERYIEAYFEDVEALGVEPADEH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +M+ LIQ + G AYE + ++ F T + NYG S + +DE + G RV
Sbjct: 113 PKATEHIEEMVELIQKLEAKGMAYEVDGDVYFHTPAFDNYGELSHQPLDELESGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK+ P EP WESPWG+GRPGWHIECS MSS YLG DIH GG DLIF
Sbjct: 173 ERKKHPLDFVLWKKQKPGEPAWESPWGKGRPGWHIECSVMSSKYLGDTLDIHAGGPDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A + A W+H G+LN+ KMSKS GNF+T+ E+ +
Sbjct: 233 PHHENEKAQSEGATG-QPFAKYWLHAGYLNINQEKMSKSLGNFMTVREI-------RKQI 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
++R ML HYR PI+++ L +A+ L + + +
Sbjct: 285 DPQIVRFFMLSAHYRNPINYSPDLLEQAKSGLDRLNNVVYNLRDLLEKLPEGQGDSADAT 344
Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A+ +D NT + L +ARE+ L +F
Sbjct: 345 ERLAALEAHRGRFVEAMDDDFNTADGLAVLFDVARETNAYLKNAQVSRQVVEKTLALFEE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG ++ ++++ + +++++R K K +++AD IR QL++ G +LED
Sbjct: 405 LGSVLGF--FQKQDDEDLDATVNEMIEKRQAARKEKDWATADAIRDQLQAMGIVLEDT-- 460
Query: 448 PDNGQRMTRWKQK 460
+ RW++K
Sbjct: 461 ----PQGIRWRRK 469
>gi|138893764|ref|YP_001124217.1| cysteinyl-tRNA synthetase [Geobacillus thermodenitrificans NG80-2]
gi|196251125|ref|ZP_03149804.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|166200148|sp|A4IJG8|SYC_GEOTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|134265277|gb|ABO65472.1| Cysteine-tRNA ligase [Geobacillus thermodenitrificans NG80-2]
gi|196209366|gb|EDY04146.1| cysteinyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 467
Score = 418 bits (1074), Expect = e-114, Method: Composition-based stats.
Identities = 179/490 (36%), Positives = 257/490 (52%), Gaps = 57/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR IVFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKETFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV N TD+DDK+I AR+ S+P I + + + +D L C
Sbjct: 61 YD--VTYVSNFTDVDDKLIRAARELGESVP------AIAERFIEAYFEDIEALGCKKADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T +I +I IQ +I G+AYE + ++ + T YG S + IDE + G R+
Sbjct: 113 HPRVTENIETIIEFIQALIDKGYAYEVDGDVYYRTRKFDGYGKLSHQSIDELQAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL
Sbjct: 173 GEKKDDPLDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG+LN+ KMSKS GNF+ +++++ R
Sbjct: 233 FPHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
V+R ML HYR PI+++ + L A L + +
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESARRGLERLRTAYGNLQHRLGASTNLTDNDGEW 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
I + + + +D NT + I L +LA+++ H L F
Sbjct: 345 LSRLADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSENVIHAFLREFEQLM 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ + +E L + IE L+++R K + F+ AD IR +L++K ILED
Sbjct: 405 DVLGLTLKQEEL---LDEEIEALIRQRNEARKNRDFALADRIRDELKAKNIILEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|237803609|ref|ZP_04591194.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
gi|331025591|gb|EGI05647.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. oryzae str.
1_6]
Length = 460
Score = 417 bits (1073), Expect = e-114, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 254/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDTLTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALRGLPVAAPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVPAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|227112835|ref|ZP_03826491.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 461
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 173/483 (35%), Positives = 250/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TDIDDKII+RA + + +T++ + D L L P +P
Sbjct: 60 -SLKYVRNVTDIDDKIIKRAIENG------ETSDQLTTRMIAEMHADFDALNILRPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I +++ +I HAY +N +++F + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAAHGGDEFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQN 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ + IE L+Q+R K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQVDDDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|227329459|ref|ZP_03833483.1| cysteinyl-tRNA synthetase [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 461
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 173/483 (35%), Positives = 249/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TDIDDKII+RA + + +T++ + D L L P +P
Sbjct: 60 -SLKYVRNVTDIDDKIIKRAIENG------ETSDQLTTRMIAEMHADFDALNILRPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I +++ +I HAY +N +++F + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGVLSRQDLDQLQAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GSYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARAALDRLYTALRGTDASVAAHGGDEFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDVQAANQLASALRKLSGVLGLLEQDPEQFLQN 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ IE L+Q+R K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQVDDEEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|70731271|ref|YP_261012.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
gi|109894922|sp|Q4K9S1|SYC_PSEF5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|68345570|gb|AAY93176.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf-5]
Length = 460
Score = 417 bits (1072), Expect = e-114, Method: Composition-based stats.
Identities = 174/479 (36%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 1 MLTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + +A +T + +D RL P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EAFEALTERMIAAMHEDEARLNIKKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHTMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKQDPLDFVLWKAAKPGEPSWPSPWGDGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++L+ +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQV 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDIDAAAGLAARLKELASVLGVLQLEADDFLQAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +E L+Q RL K ++ +D IR Q+ + G ILED K T W+
Sbjct: 405 AEGRVDGAQVEALIQARLAARANKDWAESDRIRDQITAMGVILEDGK------GGTTWR 457
>gi|317491067|ref|ZP_07949503.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
gi|316920614|gb|EFV41937.1| cysteinyl-tRNA synthetase [Enterobacteriaceae bacterium 9_2_54FAA]
Length = 461
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 181/483 (37%), Positives = 259/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII+RA + + +T + + KD L P +P
Sbjct: 60 -NLKYVRNVTDVDDKIIKRALENG------ETCDQLTERMLAEMHKDFDSLNIARPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY +N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIPEIIEIVEQLITRGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF TI ++LE +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLE-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTEPQAEPAGGDVFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A AL LARE + + L A ILG+
Sbjct: 345 AMDDDFNTPEAYSALFDLAREVNRLKSEDMAQANALAAELRKLAKILGLLEQDPEVFLQG 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL + G +LED G + T W
Sbjct: 405 GAQADDSEVAQIEALIKQRNDARAAKDWAMADSARDQLNALGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|302188937|ref|ZP_07265610.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
Length = 460
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 256/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI +++E +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVVE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEAAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|297528461|ref|YP_003669736.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251713|gb|ADI25159.1| cysteinyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 466
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 178/490 (36%), Positives = 259/490 (52%), Gaps = 57/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR +VFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAVVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV N TD+DDK+I+ AR+ S+P I + + + +D L C
Sbjct: 61 YD--VTYVSNFTDVDDKLIKAARELGESVP------AIAERFIEAYFEDIQALGCKKADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T +I +I IQ +I G+AYE + ++ + T YG S + IDE + G R+
Sbjct: 113 HPRVTENIDAIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEI 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL
Sbjct: 173 GEKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG+LN+ KMSKS GNF+ +++++ R
Sbjct: 233 FPHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RE 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
V+R ML HYR PI+++ + L A L + ++
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEW 344
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
I + + + +D NT + I L +LA+++ H L F A
Sbjct: 345 VSRIADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLA 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ + + ++ + IE L+Q+R K + F+ AD IR +L +K ILED
Sbjct: 405 DVLGLTLKQ---DELLDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|254496542|ref|ZP_05109412.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
gi|254354241|gb|EET12906.1| cysteine tRNA synthetase [Legionella drancourtii LLAP12]
Length = 455
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 183/474 (38%), Positives = 259/474 (54%), Gaps = 40/474 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L R F +I+P I MYVCG TVYD H+G+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRTKEPFVSINPGKIGMYVCGITVYDHCHLGHARSMVCFDVIVRYLRSQGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII RA + I +T+ +D L L P ++P
Sbjct: 61 --VTFVRNITDIDDKIIARANERGI------PIDELTAHYIDAMHEDMRALNILPPNYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I LI+ ++ G+AY N ++ + S YG S + ++ G RV
Sbjct: 113 RATEHIATIIRLIERLLARGNAYVSDNGDVCYQVDSFAEYGKLSHKDLEGLMSGARVEVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKPGEPYWASPWGNGRPGWHIECSAMAIEELGEHFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + KMSKS GNF TI ++L
Sbjct: 233 PHHENEIAQSEAATH-KPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLA-------KH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVL----S 353
V+R +L +HYR ++++ + L A+ L++ QT G +D +
Sbjct: 285 HPEVVRYFLLSSHYRSSLNYSEENLFNAKKALTRLYQTMKDSPVTVNGELDNHWINEFNK 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI------EVCKEHLNKNI 405
A+ +D N+ A+ L +L+ E KN L A ++G+ E + +++
Sbjct: 345 AMNDDFNSPVALSVLFQLSHEVNKNGTPVLATTLKHLAGLMGLLQSDSAEFLQAGFDEDD 404
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AIE+L+ ERL + + AD IR +L ++G LED G + T W++
Sbjct: 405 KAAIEQLIAERLQARADRNWERADQIRAELLNQGIELED------GAKGTTWRK 452
>gi|297717798|gb|ADI50042.1| cysteinyl-tRNA synthetase [Candidatus Odyssella thessalonicensis
L13]
Length = 452
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 205/472 (43%), Positives = 277/472 (58%), Gaps = 36/472 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R+ +F +DP++I+MYVCGPTVYDFAHIGNARP++VFD+L RLLR Y
Sbjct: 1 MHLKVYNTYSRQKEDFVPLDPTHIKMYVCGPTVYDFAHIGNARPVVVFDILSRLLRQLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI A+ I IT + Q + +D LA AP
Sbjct: 60 -PKVTYVRNITDVDDKINAAAKASG------QTIRTITERTIQAYNEDMAALAAFAPDVT 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+HIP+MI++I+++I +GHAY A ++F + YG SRR DE G RV
Sbjct: 113 PRATDHIPEMIHMIEDLIANGHAYAAEGHVLFAVKTFGAYGKLSRRNHDELLAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS YLGK FDIHGGG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSDAETPGWDSPWGRGRPGWHIECSAMSEKYLGKTFDIHGGGIDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA++ + A W+HNG L + G KMSKS GNF T+ ELL +
Sbjct: 233 PHHENELAQSCCANKTDYFAKYWMHNGHLTVNGEKMSKSLGNFYTVRELLS-------EF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYND 358
+R ++ HYR+P+D + + + + + L + +G ID ++SAL +D
Sbjct: 286 TGESLRYMLMSAHYRQPLDLSKELIHQCQASLDRLYGALRGIKVYEGGIDDQMMSALLDD 345
Query: 359 LNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEH-----LNKNISI 407
LN A+ LH+LA + K D L AS ++LGI +
Sbjct: 346 LNVPLALARLHELATATNKAEDPQQKSQLASTLKASGYLLGILQQDPEAWFKGATLANAD 405
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E L+ +R + F+ AD +R+QL G +LED T W++
Sbjct: 406 EVEALIAQRNQARSARDFAKADSLRQQLTDMGIVLEDS------PAGTTWRR 451
>gi|253988481|ref|YP_003039837.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253779931|emb|CAQ83092.1| cysteinyl-tRNA synthetase [Photorhabdus asymbiotica]
Length = 461
Score = 417 bits (1071), Expect = e-114, Method: Composition-based stats.
Identities = 186/483 (38%), Positives = 260/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHPGIVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRN+TD+DDKII+RA + H ++ +TS+ + KD L L P +P
Sbjct: 61 L--TYVRNVTDVDDKIIKRAAENH------ESCDDLTSRMLAEMYKDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I L +++I GHAY N +++F S +YG+ SR+ + + + G RV
Sbjct: 113 RATRHIPEIIELTESLIKRGHAYVADNGDVMFSVESDSDYGALSRQDLSQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNGKQLGNHFDIHGGGADLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L + +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR +++T + L +A L + + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDASVSPAGGEVFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ILG+
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINCLKSEDLSAANGLAAVLRKLAGILGLLEQDPEQFLHS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ IE L+++R K K ++ AD R QL G LED G + T W
Sbjct: 405 GVQVDDEDIAKIEALIKQRNDARKNKDWTLADSARDQLNEMGIELED------GPQGTSW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|121996916|ref|YP_001001703.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
gi|187629827|sp|A1WT89|SYC_HALHL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|121588321|gb|ABM60901.1| cysteinyl-tRNA synthetase [Halorhodospira halophila SL1]
Length = 459
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 185/479 (38%), Positives = 256/479 (53%), Gaps = 45/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+N+L FQ I+P +R+YVCG TVYDF H+G+AR ++VFD + R LR+ E
Sbjct: 1 MLKIHNSLTGAKEPFQPIEPGQVRIYVCGMTVYDFCHLGHARALVVFDAVVRYLRWLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + + ++ +T + + +D + L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIRRAAENG------EPMTALTDRFIRAMHEDCSALGVEPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + MI LI+ +I GHAY N ++ F +S P YG S R+++E + G+R+
Sbjct: 113 RATERLESMIALIEELIAGGHAYVGDNGDVYFSVASFPEYGKLSGRRVEELRSGSRIEPD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FDIHGGG+DL F
Sbjct: 173 EAKHDPVDFVLWKAAKSGEPAWPSPWGDGRPGWHIECSAMSRDLLGSHFDIHGGGVDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+HNG + ++ KM+KS GNF T+ ++L
Sbjct: 233 PHHENEIAQSECASG-HRFVNYWMHNGHVRIDDEKMAKSLGNFFTVRDVLAEH------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------GIIDPAVLSAL 355
PA V+RL +L +HYR P+++T L EA L + A+
Sbjct: 285 PAEVVRLFLLSSHYRSPLNYTGDALDEARGGLERLYNALRGLPAAAPARSQARERFREAM 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL----- 401
+D NT A+ L ARE + + +LG+
Sbjct: 345 DDDFNTREALAVLFDGAREINRLREAGDASGAASAAAELRELGAVLGLLQQDPEAYLRGD 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE LV +R K K F+ AD IR +L+++G LED T+W++
Sbjct: 405 VADAEAEEIESLVAQRTAARKAKDFAEADRIRDELQARGIELEDT------PEGTKWRR 457
>gi|56418620|ref|YP_145938.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261417586|ref|YP_003251268.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765244|ref|YP_004130745.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|61216117|sp|Q5L429|SYC_GEOKA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56378462|dbj|BAD74370.1| cysteinyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|261374043|gb|ACX76786.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110110|gb|ADU92602.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 466
Score = 416 bits (1070), Expect = e-114, Method: Composition-based stats.
Identities = 179/490 (36%), Positives = 259/490 (52%), Gaps = 57/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR IVFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV N TD+DDK+I+ AR+ S+P I + + + +D L C
Sbjct: 61 YD--VTYVSNFTDVDDKLIKAARELGESVP------AIAERFIEAYFEDIQALGCKKADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T +I +I IQ +I G+AYE + ++ + T YG S + IDE + G R+
Sbjct: 113 HPRVTENIDTIIEFIQALIDKGYAYEVDGDVYYRTRKFREYGKLSHQSIDELQAGARIEI 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL
Sbjct: 173 GEKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG+LN+ KMSKS GNF+ +++++ R
Sbjct: 233 FPHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RE 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
V+R ML HYR PI+++ + L A L + ++
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESARRGLERLKTAYSNLQHRLQASTNLTDNDEEW 344
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
I + + + +D NT + I L +LA+++ H L F A
Sbjct: 345 VSRIADIRASFIREMDDDFNTANGIAVLFELAKQANLYLQEKTTSEKVIHAFLREFEQLA 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ + + ++ + IE L+Q+R K + F+ AD IR +L +K ILED
Sbjct: 405 DVLGLTLKQ---DELLDEEIEALIQKRNEARKNRDFALADRIRDELRAKNIILEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|92117041|ref|YP_576770.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
gi|123083715|sp|Q1QN87|SYC_NITHX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91799935|gb|ABE62310.1| cysteinyl-tRNA synthetase [Nitrobacter hamburgensis X14]
Length = 482
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 248/480 (51%), Positives = 316/480 (65%), Gaps = 25/480 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL ++ F IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLL++ YG
Sbjct: 1 MELRLYDTLTKEKRAFIPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLQHIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI +RA ++ P +P+N+AI +T K +QF D L CL PTHQ
Sbjct: 61 TDHVTYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEKTAEQFQADVAALGCLPPTHQ 120
Query: 123 PRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT + M+ LI+ +I GHAYEA E++FD S+P+YG+ S R+++EQK
Sbjct: 121 PRATEFVLPRDDGRADMVTLIKQLIARGHAYEAGGEVLFDVQSMPDYGALSGRRLEEQKA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G RV HK+NPADF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HNGFL +EG KMSKS GNF TINELL T+
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHTMANYWMHNGFLQVEGEKMSKSLGNFFTINELLTTE 300
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----GIIDPAV 351
KFGGR WP V+RLAML THYR PID+TV L E++ +L W G +D V
Sbjct: 301 KFGGRKWPGEVLRLAMLKTHYRSPIDWTVDALEESKRILDSWYDIVGDDTEAIGEVDREV 360
Query: 352 LSALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGIE--VCKEHLNKN 404
+ L +DLNT +A+ LH +A + D SA +LG+ +E+L +
Sbjct: 361 SAFLGDDLNTSAAVTRLHAIAASRIGKSGQLQIDAKRKLKVSAVMLGLLGRTKREYLETD 420
Query: 405 ------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
S + L+ +R K F +D IR +L + G +L+D K+ D T W+
Sbjct: 421 PQVILVDSNLVAHLLSDRAAARARKDFKESDRIRDELAAMGVVLKDGKDADGKPE-TTWE 479
>gi|261820651|ref|YP_003258757.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
gi|261604664|gb|ACX87150.1| cysteinyl-tRNA synthetase [Pectobacterium wasabiae WPP163]
Length = 461
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TDIDDKII+RA + + +T++ + D L + P +P
Sbjct: 60 -SLKYVRNVTDIDDKIIKRAIENG------ETSDQLTTRMIAEMHADFDALNIVHPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I +++ +I HAY +N +++F + P YG+ SR+ +D+ + G RV
Sbjct: 113 RATHHIADIIEMVETLIARRHAYVASNGDVMFSVDTAPGYGALSRQDLDQLQAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 AVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSRCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDLSVAAHGGDEFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASALRKLSGVLGLLEQDPEQFLQN 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ + IE L+Q+R K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQVDNDEVKEIEALIQQRKDARAAKDWALADQARDRLNEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|188026279|ref|ZP_02961521.2| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
gi|188022312|gb|EDU60352.1| hypothetical protein PROSTU_03559 [Providencia stuartii ATCC 25827]
Length = 494
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 180/485 (37%), Positives = 255/485 (52%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++I+NTL R+ EF+ I P I MYVCG T+YD HIG+ R + FD + R LRY
Sbjct: 32 QMLQIFNTLSRQKEEFKPIHPGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGY 91
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YVRN+TDIDDKII+RA + N+ + +T++ + KD L L P +
Sbjct: 92 DL--NYVRNVTDIDDKIIKRAAEN------NETVDSLTTRMLAEMHKDFDALNILRPDSE 143
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI ++I + +I GHAY N +++F+ + NYG SR+ +++ + G RV
Sbjct: 144 PRATQHIDEIIEITDLLIKRGHAYVADNGDVMFEVKTDKNYGQLSRQDLEQLQAGARVEV 203
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+
Sbjct: 204 ADSKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKALGNHFDIHGGGSDLM 263
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++LE
Sbjct: 264 FPHHENEIAQSSCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------Y 315
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVL 352
+ +R +L HYR +++T + L +A L +
Sbjct: 316 YDPETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSVAPAGGEIFKKRFE 375
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
A+ +D NT A L +ARE + ++L A +LG+
Sbjct: 376 DAMNDDFNTPEAYSVLFDMAREINRLKSENKVAANELASELRKLAGVLGLLEQDPEAFLQ 435
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
IE L+++R K K+++ AD R +L + G +LED G + T
Sbjct: 436 GNAQGEGDEEVAKIEALIKQRNNARKNKEWALADAARDELTAMGIVLED------GAQGT 489
Query: 456 RWKQK 460
W++K
Sbjct: 490 TWRRK 494
>gi|85713337|ref|ZP_01044354.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
gi|85692839|gb|EAQ30820.1| cysteinyl-tRNA synthetase [Idiomarina baltica OS145]
Length = 460
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 171/481 (35%), Positives = 255/481 (53%), Gaps = 46/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++NTL R+ F + + MYVCG T YD HIG+AR + FDV+ R LR
Sbjct: 1 MALTLFNTLTREKETFTPREAGRVGMYVCGVTTYDLCHIGHARTYVAFDVVVRYLRKIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITD+DDKII+RA + + +T + + +D L L P +
Sbjct: 61 D--VTYVRNITDLDDKIIKRAAENG------EPFDALTQRYIDEMHRDFAALNLLEPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T H+ +I +I++++ G+AY+ N +++FD S+ +YG SR+ +++ + G RV
Sbjct: 113 PRVTQHMDDIIRMIESLVTQGYAYQADNGDVLFDVSTFDDYGRLSRQNLEQLQAGARVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K +P DF+LWK++ EP W+SPWG GRPGWHIECSAM+ +LG+ FDIHGGG DL
Sbjct: 173 EASKLDPLDFVLWKKAKAGEPSWDSPWGEGRPGWHIECSAMNKAHLGETFDIHGGGSDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA++ N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 FPHHENEIAQSCCANQT-NYVNYWMHSGMVQVDDVKMSKSLGNFFTIRDVL-------NA 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------IIDPAV 351
+ A +R +L +HYR +++T L +A L +
Sbjct: 285 YDAETVRYFLLSSHYRSQLNYTQDNLEQAHAALERLYTALRGLTPEQPDENLRLPYWNQF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL-- 401
A+ +D N A+ L +L RE K D L + A +LG+
Sbjct: 345 TDAMNDDFNAPEAMSVLFELVREINKARDNDAERAAQLAHVLVELADVLGLLQQSPESFL 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE L+ +R K +++AD R +L G +LED G T+W+
Sbjct: 405 QGGADDEVALIEALIAQRNKARAEKDWAAADEARDRLTEMGIVLED------GANGTQWR 458
Query: 459 Q 459
+
Sbjct: 459 R 459
>gi|316934832|ref|YP_004109814.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
gi|315602546|gb|ADU45081.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
Length = 463
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 223/468 (47%), Positives = 304/468 (64%), Gaps = 20/468 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL ++ F +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLTKEKRTFAPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA +++P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 EGHVKYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I ++ G AY + ++F ++ P YGS + R +DE
Sbjct: 121 PRATEHIGEMRSIIDKLVAGGFAYVEQDHVLFSPGAMNAANGVLPRYGSLANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP---WGRGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATPGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA + A W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-DPAV 351
T+KFGGRSW +RLAML THYR+PID+TV L EAE + W + + V
Sbjct: 301 ATEKFGGRSWDGATLRLAMLKTHYRQPIDWTVDALHEAEKAILDWSEFTKDATPARCDEV 360
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIE 410
++AL +DLNT I LH L R + + +LL +LGI V ++ ++ ++
Sbjct: 361 IAALTDDLNTPKMIAELHAL-RRAGRAQELLGAL----QLLGIGRVFRQSIDIGVNA--R 413
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L++ R K + +D IR +L + G +L+D K+ +NG+ +T W+
Sbjct: 414 ALIEARTAARANKDWKESDRIRDELAAMGVVLKDGKD-ENGKPVTTWE 460
>gi|83310335|ref|YP_420599.1| cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
gi|109894907|sp|Q2W7Y5|SYC_MAGMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|82945176|dbj|BAE50040.1| Cysteinyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
Length = 459
Score = 416 bits (1069), Expect = e-114, Method: Composition-based stats.
Identities = 213/480 (44%), Positives = 270/480 (56%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+ Y
Sbjct: 1 MPLVLYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKI RA++ + IS IT + T F +D L CL P +
Sbjct: 60 -PSVRYVRNITDVDDKINARAKESG------EPISAITERTTAMFHEDIGALNCLLPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI +I+ +I G AY A ++F ++ +YG+ SRR DE G RV
Sbjct: 113 PRATAHITQMIAMIERLIAKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK+P DF+LWK S+ PGW+SPWGRGRPGWHIECSAMS +LG+ FDIHGGG DL+F
Sbjct: 173 PYKKDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ + A W+HNG+L +EG KMSKS GNF T+ +LL+
Sbjct: 233 PHHENEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLLDQA------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN----- 357
P IRLAML THY +P D+T L +A+ L + ID
Sbjct: 285 PGEAIRLAMLTTHYHQPFDWTADGLKQAKATLDRLYTALRGVADIDANGYEGEAPLEVLA 344
Query: 358 ----DLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEVCKEH------- 400
DLNT AI LH+LA K L AS H+LG+
Sbjct: 345 ALKDDLNTPLAISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGTG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE + R K + F+ AD IR+ L ++G +LED G T WK+
Sbjct: 405 AADGPSDAEIEAAITARAEARKSRNFAEADRIRQDLAARGVVLED------GAGGTTWKR 458
>gi|307544947|ref|YP_003897426.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
gi|307216971|emb|CBV42241.1| cysteinyl-tRNA synthetase [Halomonas elongata DSM 2581]
Length = 467
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 178/476 (37%), Positives = 254/476 (53%), Gaps = 45/476 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ F IDP +RMYVCG TVYD+ H+G+AR M+ FDV+ R LR +
Sbjct: 1 MQIYNTLTRRKETFTPIDPGRVRMYVCGMTVYDYCHLGHARVMVAFDVITRYLRARGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKI++RA + + I+ +T + +D RL L P +PR
Sbjct: 60 -VTYVRNITDIDDKILKRAEENG------ETIASLTDRMIDAMHEDEGRLGVLRPDAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT H+ +++ +IQ +I G+AY +N ++ + +YG + R D+ + G RV +
Sbjct: 113 ATQHVDEIVTMIQTLIDKGYAYAASNGDVYYRVRKFADYGKLNNRDPDDMRAGARVDVEE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P E W SPWG GRPGWHIECSAMS+ LG+ FDIHGGG DL FP
Sbjct: 173 LKEDPLDFVLWKAAKPGEADWLSPWGPGRPGWHIECSAMSTCCLGETFDIHGGGPDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A ++ N W+H G + ++ KMSKS GNF TI E+LE
Sbjct: 233 HHENEIAQSEAATG-KQYVNTWMHAGAVRVQHEKMSKSLGNFFTIREVLE-------HHD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------IDPAV 351
V+R ++ +HYR PI++ L +A L ++ + D
Sbjct: 285 PEVVRYLLVASHYRSPINYAPDSLADARKSLERFYNALDGVALEGVETPGEVDPSFDRRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL-- 401
+ A+ +D NT AI L LARE + L +LG+ + +
Sbjct: 345 IEAMDDDFNTAGAISVLFDLARELNRARKEAPEQAPALAAELKRLGGVLGLLQQEPAVFL 404
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
IE + ER + + F+ AD IR +L + G +L+D + +
Sbjct: 405 KGGAGELPLSEAEIEARISERAEAKQARDFARADAIRDELAALGIVLKDSREGTSW 460
>gi|115524011|ref|YP_780922.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
gi|122296629|sp|Q07Q42|SYC_RHOP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|115517958|gb|ABJ05942.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
Length = 463
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 226/468 (48%), Positives = 301/468 (64%), Gaps = 20/468 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL R+ F +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLSREKRTFTPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA ++ P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 EAHVKYVRNITDVDDKINDRAARDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I +I G AY A + ++F ++ P YG+ + R +DE
Sbjct: 121 PRATEHIGEMRDIIDRLIAGGFAYVAADHVLFSPQAMNAKDGVLPRYGALANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP G +GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPGGIAVQGRPGWHIECSAMSWKHLGERFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA E+ A W+HNGFL +EG KMSKS GNF+TI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTERMAETWMHNGFLQVEGEKMSKSLGNFVTIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
T KFGG+ W V+RLAML THYR PID+TV+ L EAE + W + +
Sbjct: 301 ATDKFGGKRWDGAVLRLAMLKTHYRSPIDWTVEALHEAEKAIYDWSEFTKDATPAPCDEV 360
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIAIE 410
+ AL +DLNT I LH L R K +LL +LGI V ++ + +++ +
Sbjct: 361 IDALADDLNTPKMIAELHGL-RRVGKPAELLGAL----QLLGIGRVFRQTIEIDVNA--Q 413
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L++ R K F +D IR +L + G +L+D K+ D +T W+
Sbjct: 414 ALIEARTAARARKDFKESDRIRDELAAMGVVLKDGKDADGKP-VTTWE 460
>gi|146341598|ref|YP_001206646.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
gi|146194404|emb|CAL78429.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Bradyrhizobium
sp. ORS278]
Length = 469
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 231/474 (48%), Positives = 303/474 (63%), Gaps = 26/474 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R+ F +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR YG
Sbjct: 1 MDLRLYDTASREKRPFVPLDPNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRRIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITD+DDKI RA +++P +P+N+AI +T QF DT L L PT +
Sbjct: 61 AEHVTYVRNITDVDDKINARAARDYPGLPLNEAIRKVTEVTANQFHSDTAALGSLPPTFE 120
Query: 123 PRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT+ + M+ LI+ +I GHAYEA E++FDT S+P+YG+ S RK+++Q
Sbjct: 121 PRATDFVLPRPDGKADMVTLIEQLIARGHAYEAGGEVLFDTRSMPDYGALSGRKLEDQLA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G RV HKKNPADF+LWK+S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKKNPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HN F+ +EG KMSKS GNF+TI +LL
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTSVMANYWLHNEFVQVEGAKMSKSLGNFVTIRDLLAD- 299
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLS 353
WP V+RL ML HYR P D+TV+ L E+ L W + + +PA+++
Sbjct: 300 ------WPGEVLRLNMLKMHYRSPADWTVKGLEESAKTLDDWYRVAADAPGEQPEPAIIN 353
Query: 354 ALYNDLNTVSAIQALHKL-ARESTKNHDLLPIFNASAHILGI--------EVCKEHLNKN 404
AL +D+NT I LH L AR ++ + F S G E K+
Sbjct: 354 ALLDDINTPLMIAELHALRARAASGSEVDRAAFAGSLRYFGFLSETATLWEARKQQAKGV 413
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +E L+ ER K F +D +R +L + G +L+D K +G+ +T W+
Sbjct: 414 DAAEVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGK-GADGKPVTTWE 466
>gi|298486254|ref|ZP_07004317.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
gi|298159261|gb|EFI00319.1| Cysteinyl-tRNA synthetase [Pseudomonas savastanoi pv. savastanoi
NCPPB 3335]
Length = 460
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 257/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVARWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|300715706|ref|YP_003740509.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
gi|299061542|emb|CAX58656.1| Cysteinyl-tRNA synthetase [Erwinia billingiae Eb661]
Length = 462
Score = 416 bits (1068), Expect = e-114, Method: Composition-based stats.
Identities = 180/484 (37%), Positives = 259/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + + ++T++ + KD L L P +P
Sbjct: 60 -SLNYVRNITDIDDKIIKRANENG------ETVEVLTNRMIGEMHKDFAALNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I ++ +I HAY +N +++F S P YG SR+ +++ + G RV +
Sbjct: 113 RATRHISEIIEIVSKLIDREHAYVASNGDVMFSVPSDPQYGQLSRQDLEQLQAGARVEVE 172
Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+
Sbjct: 173 QDVKRNPMDFVLWKMSKANEPSWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 FPHHENEIAQSTCAH-EGPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR +++ L +A L + + + +
Sbjct: 285 FDAETVRCFLMSGHYRSQLNYGEDNLKQARSALERLYTAIRNTDSSAEPAGGEVFETRFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
A+ +D NT A AL +ARE + + L A +LG+ L
Sbjct: 345 EAMDDDFNTPEAYSALFDMAREVNRLKAEDMSAANGLAAKLRQLAGVLGLLEQDPELFLQ 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
N + IE L+++RL + K ++ AD R +L + G +LED G + T
Sbjct: 405 NGAQSNDDEVAEIEALIRQRLDARREKNWAQADMARDKLVAMGIVLED------GPQGTS 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|91774855|ref|YP_544611.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|122985612|sp|Q1H417|SYC_METFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91708842|gb|ABE48770.1| cysteinyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 455
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 261/476 (54%), Gaps = 42/476 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R F I P + MYVCG TVYD+ H+G+AR M+VFD++ R LR E
Sbjct: 1 MLKIYNTLARAKQTFSPIIPGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRSSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + + I+ +T + +D RL P +P
Sbjct: 61 --VTYVRNITDIDDKIIARANENG------ETINALTDRFIAAMNEDAARLGVWRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I +MI +I +I HAY N ++ + SS +YG S + +++ + G RV
Sbjct: 113 RATDYIHEMIAMIVALIEKHHAYAADNGDVYYAVSSFASYGKLSGKSLEDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++P DF+LWK + P EP W+SPWG GRPGWHIECSAM + +LG FDIHGGG DL F
Sbjct: 173 AHKRDPMDFVLWKAAKPGEPSWDSPWGPGRPGWHIECSAMGARHLGPHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEGAHGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
A V+R +L HYR P++++ L +A+ L++ T +
Sbjct: 285 DAEVVRFFILRAHYRSPLNYSSHHLDDAKQALTRLYNTLRGRELPQLDIDWRQPEAERFK 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK-------EHLNK 403
AL +D NT A L +LA E+ + + A A LG+ E +
Sbjct: 345 QALDDDFNTPEAFAVLFELASEANRTGSAVQAALLKALAGQLGLLQRDPDEFLKGEAVAG 404
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE+L+ ERL K K F+ AD IR L ++G ILED + T W++
Sbjct: 405 LSPDEIERLIAERLAARKCKNFAEADRIRDALTAQGIILEDT------PQGTSWRR 454
>gi|50122074|ref|YP_051241.1| cysteinyl-tRNA synthetase [Pectobacterium atrosepticum SCRI1043]
gi|61216191|sp|Q6D2E4|SYC_ERWCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|49612600|emb|CAG76050.1| cysteinyl-RNA synthetase [Pectobacterium atrosepticum SCRI1043]
Length = 461
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 175/483 (36%), Positives = 251/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHADQVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + +T++ + D L L P +P
Sbjct: 60 -SLKYVRNITDIDDKIIKRAIENG------ETSDQLTTRMIAEMHADFDALNILRPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I +++ +I HAY +N +++F + YG SR+ +D+ + G RV
Sbjct: 113 RATHHIADIIEMVETLITRRHAYVASNGDVMFSVDTASGYGVLSRQDLDQLRAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKPGEPHWSSPWGEGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSCCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARAALERLYIALRGTDPSVEAHGGDEFEARFHD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDVQAANQLASTLRKLSGVLGLLEQDPEQFLQN 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+N + IE L+Q+R K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQVNDDEVKEIEALIQQRKDARATKDWALADQARDRLNEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|157369409|ref|YP_001477398.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
gi|187631631|sp|A8GAY0|SYC_SERP5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157321173|gb|ABV40270.1| cysteinyl-tRNA synthetase [Serratia proteamaculans 568]
Length = 461
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 178/483 (36%), Positives = 253/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII RA + ++ +T++ + D L P +P
Sbjct: 60 -SLNYVRNVTDVDDKIIRRATENG------ESCDQLTTRMLAEMHADFDSLLIERPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +++ + Q +I GHAY +N +++F S P YG SR+ +D+ + G RV
Sbjct: 113 RATQHIAEIVEITQRLIDRGHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLG-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDVNAQPAGGEVFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A AL LARE + + L A +LG+ + L
Sbjct: 345 AMDDDFNTPEAYSALFDLAREVNRLKAEDLTAANGLAAELRKLAKVLGLLQQEPELFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K K ++ AD R +L +LED G + T W
Sbjct: 405 GAQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMNIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|54294205|ref|YP_126620.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|61216142|sp|Q5WX29|SYC_LEGPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|53754037|emb|CAH15510.1| cysteine tRNA synthetase [Legionella pneumophila str. Lens]
gi|307610020|emb|CBW99553.1| cysteine tRNA synthetase [Legionella pneumophila 130b]
Length = 456
Score = 415 bits (1067), Expect = e-114, Method: Composition-based stats.
Identities = 194/475 (40%), Positives = 261/475 (54%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L RK F ++ P I MYVCG TVYD H+G+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRKKEPFVSLRPGKIGMYVCGITVYDHCHLGHARSMVAFDVMVRYLRSQGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + S I +T++ DT L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIARASERDVS------IDELTAQYIDAMNNDTHALNILPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I LIQ ++ G+AY N ++ ++ + P YG S + I+ G+RV
Sbjct: 113 RATGHIETIIRLIQRLLEKGNAYVSENGDVCYEVDTFPEYGKLSHKDIEGLVSGSRVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMHELGEQFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + G KM+KS GNF TI ++L +
Sbjct: 233 PHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNFYTIADVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSA-- 354
VIR +L +HYR P++++ + L A+ L + Q T+ +D
Sbjct: 285 HPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVPPQTADSKLDEYWQEQFN 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKN 404
+ +D NT A+ L +LA E K++ L A ILG L +
Sbjct: 345 QAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILGFLQKDPESFLQSGLAEE 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+ ERL + ++ AD IR L SKG LED G T W++
Sbjct: 405 EKLVIEQLIAERLKARAERNWTKADQIRADLLSKGIELED------GATGTTWRR 453
>gi|323138201|ref|ZP_08073273.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
gi|322396453|gb|EFX98982.1| cysteinyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
Length = 455
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 231/473 (48%), Positives = 300/473 (63%), Gaps = 32/473 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + ++IYNTL R+ EF+ +D SN+RMYVCGPTVYD+AHIGNARP+IVFDVLYRLLR++
Sbjct: 1 MSQTLRIYNTLAREKQEFRPLDASNVRMYVCGPTVYDYAHIGNARPLIVFDVLYRLLRHH 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG VTYVRNITD+DDKI RA + S I +T + + F +D L CL PT
Sbjct: 61 YGADHVTYVRNITDVDDKINARAAERGIS------IRELTEETNRVFQEDVRALGCLEPT 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
QPRAT HI +MI +I+ +I HAY A+ ++FD S+ +YG SRR +DE G RV
Sbjct: 115 VQPRATEHIAEMISIIERLIASRHAYAADGHVLFDVPSMKDYGRLSRRSLDEMLAGARVD 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+ DF+LWK S EPGW+SPWGRGRPGWHIECSAMS +LG+ FDIHGGG+DL
Sbjct: 175 VAPYKRGDMDFVLWKPSKENEPGWDSPWGRGRPGWHIECSAMSWKHLGETFDIHGGGIDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA + AN W+HNGFL +EG KMSKS GNF+TI+ELL T+KFGGR
Sbjct: 235 VFPHHENEIAQSRCAFDHDVMANYWMHNGFLQVEGEKMSKSLGNFVTIHELLHTEKFGGR 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------SKGIIDPAVLSA 354
WP V+RLAML THYR+PID+TV+ L EAE L +W + + A
Sbjct: 295 KWPGEVLRLAMLRTHYRQPIDWTVKALEEAETSLRRWAEFIEAGETTGDSSDFFGQFVGA 354
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------VCKEHLNKNISI 407
L +DLNT A+ LH + + + + ++GI+ + +E +
Sbjct: 355 LKDDLNTPLAMSFLHSVFDP--------RLLDDALMLVGIDARSYVQWIERETRRGVDAA 406
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AI L+ RL K ++ +D IR +L + G L+D K+ T W+ K
Sbjct: 407 AIGALINARLAARAAKNWAESDRIRDELAAMGIALKDNKDGT-----TTWEVK 454
>gi|148548000|ref|YP_001268102.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
gi|187629852|sp|A5W458|SYC_PSEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148512058|gb|ABQ78918.1| cysteinyl-tRNA synthetase [Pseudomonas putida F1]
Length = 460
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR E
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ETFDALTARMIDAMHEDERRLNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTRCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDPEAAAGLAGRLRELGDVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457
>gi|212637933|ref|YP_002314453.1| cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|226735044|sp|B7GJ46|SYC_ANOFW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|212559413|gb|ACJ32468.1| Cysteinyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 465
Score = 415 bits (1066), Expect = e-114, Method: Composition-based stats.
Identities = 174/489 (35%), Positives = 258/489 (52%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL RK F ++P+ ++MYVCGPTVY++ HIGNARP IVFD + R L++
Sbjct: 1 MSIQVYNTLTRKKEPFIPLEPNKVKMYVCGPTVYNYIHIGNARPAIVFDTIRRYLQFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV N TD+DDK+I AR+ +P I + + + +D T L C
Sbjct: 61 E--VQYVSNFTDVDDKLIRAARELGEDVPT------IAERFIEAYFEDITALGCKKADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T +I +I I+ +I G+AYE + ++ + T +YG S + +DE K G R+
Sbjct: 113 PRVTENIDTIIQFIEQLIEKGYAYEVDGDVYYRTRRFSDYGKLSHQSVDELKSGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKAAKEGEIYWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNFI +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFILVHDII-------KQV 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI+++ L A L + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSQPLLESARSGLERLKTAYANLKHRLESSTNLTTNDEQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + + +D NT + I L +LA+++ L F
Sbjct: 345 AKIEELRNEFIREMDDDFNTANGIAVLFELAKQANVYLMENHTSQQVIQAFLQQFEQLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + + ++ + IE L+Q+R+ K + F+ AD IR +L++K ILED
Sbjct: 405 VLGLSLQQ---DELLDEEIEALIQQRIEARKNRDFALADRIRDELKAKNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRW++
Sbjct: 457 -PQGTRWRR 464
>gi|303240982|ref|ZP_07327492.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
gi|302591407|gb|EFL61145.1| cysteinyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 467
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 176/490 (35%), Positives = 253/490 (51%), Gaps = 59/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK EF I+ +RMY CGPTVY++ HIGNARP I+FD + R L Y +
Sbjct: 1 MKIYNTLTRKKEEFVPINEKEVRMYSCGPTVYNYFHIGNARPFIIFDTVRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I+RA +E ++ + + +++ D L T P+
Sbjct: 60 -VKFVQNFTDIDDKMIKRANEEGITV------KDLADRFIKEYFIDAKGLGIDEATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I LI+ + +G AY N ++ F YG S +++ +G+ V
Sbjct: 113 ATENIDAIIDLIKKLEENGFAYNVNGDVYFSIGKFKEYGKLSHHSLEDLAIGSSVNVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF +WK P EP W+SPWG+GRPGWHIECSAM++ YLG+ DIH GG DLIFPH
Sbjct: 173 KQNPMDFAVWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNGF+N+ KMSKS GNF T+ +++E +
Sbjct: 233 HENEIAQSEAASG-KPFAKYWMHNGFINVNNEKMSKSAGNFFTVRDIVE-------KFDY 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
VIR ML HYR PI+F+ L +A+ L + +
Sbjct: 285 EVIRFFMLSAHYRSPINFSADLLEQAQNGLERIYNCLDNLVYLGEHAQAKEMSDEEKSLQ 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------IFNASA 389
I + + +DLNT AI A+ + +E N +
Sbjct: 345 SRLLEIKGKFIEGMDDDLNTADAIAAIFDIVKEVNSNITASSNSSKEIIDFSHSLIRELG 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI ++ N+ +E L+ +R K K + +D IR +L+ G +LED
Sbjct: 405 GVLGI--GQKQKENNLDSEVEALISQRQQARKEKNWKLSDEIRDKLKDMGIVLEDT---- 458
Query: 450 NGQRMTRWKQ 459
+ +WK+
Sbjct: 459 --PQGVKWKR 466
>gi|77459860|ref|YP_349367.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
gi|109894924|sp|Q3KA28|SYC_PSEPF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|77383863|gb|ABA75376.1| cysteinyl-tRNA synthetase [Pseudomonas fluorescens Pf0-1]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 172/479 (35%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 1 MLTIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + ++ +T + +D RL P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ESFEALTERMIAAMHEDEARLNIKKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFMGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++L+ +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPKVAPAGGEAFVERFTQV 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQLEADDFLQAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + ++ L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGRVDAAEVDALIQARLTARANKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|22125011|ref|NP_668434.1| cysteinyl-tRNA synthetase [Yersinia pestis KIM 10]
gi|45440695|ref|NP_992234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
gi|21957858|gb|AAM84685.1|AE013714_1 cysteine tRNA synthetase [Yersinia pestis KIM 10]
gi|45435553|gb|AAS61111.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Microtus str.
91001]
Length = 476
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 180/484 (37%), Positives = 257/484 (53%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 15 PMLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +
Sbjct: 75 --SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLE 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 127 PRATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEV 186
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+
Sbjct: 187 ADVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 246
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L
Sbjct: 247 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------Y 298
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 299 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFR 358
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A L +ARE + + L A +LG+ L
Sbjct: 359 TAMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQ 418
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IE L+++R K ++ AD R QL G +LED G + T
Sbjct: 419 GGAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTT 472
Query: 457 WKQK 460
W++K
Sbjct: 473 WRRK 476
>gi|300023350|ref|YP_003755961.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525171|gb|ADJ23640.1| cysteinyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 469
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 228/478 (47%), Positives = 296/478 (61%), Gaps = 32/478 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL R+ EF IDPSN+RMYVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MALKLYNTLTRQKAEFAPIDPSNVRMYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITD+DDKI RA ++ P +P+NDAI +T +QF +D L L PT +
Sbjct: 61 PEHVTYVRNITDVDDKINARAARDFPDLPLNDAIRKVTEATEKQFHEDIAALGVLPPTFE 120
Query: 123 PRATNHIPQ------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
PRAT +I + M+ LI+ ++ G+AY A + ++FD +S+P+YG S R +DE + G
Sbjct: 121 PRATEYIRRDDGRETMVSLIEALVQRGNAYVAEDHVLFDVASMPDYGRLSNRSLDEMEAG 180
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDI 233
RV +KK P DF+LWK S P EP W SP GRPGWHIECSAM+ LG FDI
Sbjct: 181 ARVEVAPYKKGPMDFVLWKPSKPGEPAWPSPCGIATPGRPGWHIECSAMAGALLGPEFDI 240
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG+DL FPHHENEIAQS CA AN+W+HNGFL +EG KMSKS GNF+TINELL
Sbjct: 241 HGGGIDLTFPHHENEIAQSRCAHGTPFMANVWMHNGFLQVEGEKMSKSLGNFVTINELLS 300
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----TSTSKGIIDP 349
WP V+R ML THYR+PID+T + L E++ +LS W ++ + + P
Sbjct: 301 D------GWPGEVLRFNMLRTHYRQPIDWTKKGLEESQKILSGWFSQNGLSTDDRTELSP 354
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
A L AL +DLNT AI LH A A+ LG +
Sbjct: 355 AFLDALADDLNTPKAIAELHGFA-----TAKDATRLGAALSFLGFDGATLKKADARAAET 409
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++++ +E L+ RL K K F+ +D IR +L G L+D KN + G+ T W+
Sbjct: 410 AQSVASKVEPLIIARLDARKRKDFAESDRIRDELAKMGISLKDAKNKETGEIETTWEV 467
>gi|313499077|gb|ADR60443.1| CysS [Pseudomonas putida BIRD-1]
Length = 460
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 251/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR E
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ESFDALTARMIDAMHEDERRLNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457
>gi|238751080|ref|ZP_04612576.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
gi|238710770|gb|EEQ02992.1| Cysteinyl-tRNA synthetase [Yersinia rohdei ATCC 43380]
Length = 473
Score = 415 bits (1066), Expect = e-113, Method: Composition-based stats.
Identities = 185/484 (38%), Positives = 259/484 (53%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 12 PMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 71
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +
Sbjct: 72 --SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLE 123
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HIP++I L + +I HAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 124 PRATHHIPEIIELTERLIAREHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEI 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+
Sbjct: 184 ADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 243
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++LE
Sbjct: 244 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLE-------Y 295
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 296 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVHAAPAGGAEFEARFR 355
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A L LARE + + L AH+LG+ L
Sbjct: 356 AAMDDDFNTPEAYSVLFDLAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQ 415
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IE L+++R K ++ AD R QL G +LED G + T
Sbjct: 416 SGAQSDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTT 469
Query: 457 WKQK 460
W++K
Sbjct: 470 WRRK 473
>gi|108808560|ref|YP_652476.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|108811182|ref|YP_646949.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|145599972|ref|YP_001164048.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149365066|ref|ZP_01887101.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|153947472|ref|YP_001401974.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162421370|ref|YP_001605813.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165927660|ref|ZP_02223492.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|166011255|ref|ZP_02232153.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166214354|ref|ZP_02240389.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|167398585|ref|ZP_02304109.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167422736|ref|ZP_02314489.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167423331|ref|ZP_02315084.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|218930118|ref|YP_002347993.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|229838673|ref|ZP_04458832.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229896170|ref|ZP_04511340.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|229899240|ref|ZP_04514383.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229901410|ref|ZP_04516532.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|270489600|ref|ZP_06206674.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294504817|ref|YP_003568879.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
gi|21264007|sp|Q8ZCC0|SYC_YERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123073499|sp|Q1CKY1|SYC_YERPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123372235|sp|Q1C4U1|SYC_YERPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187470969|sp|A7FL46|SYC_YERP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187470970|sp|A4TP63|SYC_YERPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558804|sp|A9R253|SYC_YERPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|108774830|gb|ABG17349.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|108780473|gb|ABG14531.1| cysteinyl-tRNA synthetase [Yersinia pestis Antiqua]
gi|115348729|emb|CAL21675.1| cysteinyl-tRNA synthetase [Yersinia pestis CO92]
gi|145211668|gb|ABP41075.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides F]
gi|149291479|gb|EDM41553.1| cysteinyl-tRNA synthetase [Yersinia pestis CA88-4125]
gi|152958967|gb|ABS46428.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 31758]
gi|162354185|gb|ABX88133.1| cysteinyl-tRNA synthetase [Yersinia pestis Angola]
gi|165920414|gb|EDR37691.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
F1991016]
gi|165989933|gb|EDR42234.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
E1979001]
gi|166204483|gb|EDR48963.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
B42003004]
gi|166958327|gb|EDR55348.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
MG05-1020]
gi|167051089|gb|EDR62497.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Antiqua str.
UG05-0454]
gi|167057501|gb|EDR67247.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Mediaevalis str.
K1973002]
gi|229681339|gb|EEO77433.1| cysteinyl-tRNA synthetase [Yersinia pestis Nepal516]
gi|229687642|gb|EEO79715.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
India 195]
gi|229695039|gb|EEO85086.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Orientalis str.
PEXU2]
gi|229701093|gb|EEO89122.1| cysteinyl-tRNA synthetase [Yersinia pestis Pestoides A]
gi|262362880|gb|ACY59601.1| cysteinyl-tRNA synthetase [Yersinia pestis D106004]
gi|262366803|gb|ACY63360.1| cysteinyl-tRNA synthetase [Yersinia pestis D182038]
gi|270338104|gb|EFA48881.1| cysteine--tRNA ligase [Yersinia pestis KIM D27]
gi|294355276|gb|ADE65617.1| cysteinyl-tRNA synthetase [Yersinia pestis Z176003]
Length = 461
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 257/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|56460141|ref|YP_155422.1| cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
gi|61216136|sp|Q5QYP3|SYC_IDILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56179151|gb|AAV81873.1| Cysteinyl-tRNA synthetase [Idiomarina loihiensis L2TR]
Length = 459
Score = 414 bits (1065), Expect = e-113, Method: Composition-based stats.
Identities = 176/480 (36%), Positives = 268/480 (55%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++NTL RK F+ I P ++ +YVCG T YD+ HIG+AR + FD++ R LR
Sbjct: 1 MALTVFNTLTRKKQLFEPIQPGHVGIYVCGVTTYDYCHIGHARTYVAFDIVVRYLRKLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKII+RA + + +T + ++ KD L + P +
Sbjct: 61 --SVKYVRNITDLDDKIIKRAAENG------EDFHQVTERFIREMHKDFDALNLVRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+H+ ++I +I+ +I +G+AYEA N +++FD S+ +YG SR+ +++ + G+RV
Sbjct: 113 PRVTSHMDEIILMIERLIENGNAYEAGNGDVLFDVSTFNDYGKLSRQDLEQLQAGSRVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+ +LG FDIHGGG DL
Sbjct: 173 DAAKQDPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNKKHLGSTFDIHGGGSDLS 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA++ E W+H+G + ++ KMSKS GNF TI +LE
Sbjct: 233 FPHHENEIAQSCCANQSE-YVKYWMHSGMVQVDNEKMSKSLGNFFTIRSVLE-------Q 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAV 351
+ A +R +L +HYR +++T + L +A L + + +
Sbjct: 285 YDAETVRYFLLSSHYRSQLNYTQENLDQAHSALERLYTALRDITPQTASEELRSKYWQSF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL-- 401
A+ +DLN A+ L ++ARE +N + L + A ++G+
Sbjct: 345 QQAMDDDLNAPEAMSVLFEIAREINRNRESAPDTAAQLAHVLLELAEVMGLLQQSPEEFL 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ +R + K +++AD R +L + G +LED G TRW++
Sbjct: 405 QGDDDDVAKIEALIAKRNQAREDKDWAAADEARDELTNMGIVLED------GAEGTRWRR 458
>gi|312961737|ref|ZP_07776235.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
gi|311283996|gb|EFQ62579.1| Cysteinyl-tRNA synthetase [Pseudomonas fluorescens WH6]
Length = 462
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+ +
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + +A +T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EAFDALTERMIAAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGTKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ + P
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDNLKDAKGALERFYHALKGLPAVAPAGGEAFVARFTEV 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDLDAAAGLAARLKELASVLGVLQMEADDFLQAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGRVDAAQVEALIQARLAARTNKDWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|257483826|ref|ZP_05637867.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
11528]
gi|289625911|ref|ZP_06458865.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289651301|ref|ZP_06482644.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
2250]
gi|330868387|gb|EGH03096.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
gi|330890007|gb|EGH22668.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
gi|330985629|gb|EGH83732.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 460
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 257/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|213968819|ref|ZP_03396960.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
gi|213926422|gb|EEB59976.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato T1]
Length = 466
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 177/478 (37%), Positives = 256/478 (53%), Gaps = 46/478 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 8 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYDL 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +PR
Sbjct: 68 --TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEPR 119
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL FP
Sbjct: 180 SKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + AN W+H G + + G KMSKS NF T+ ++LE +
Sbjct: 240 HHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KYH 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSAL 355
V+R ++ +HYR I+++ L E++ L ++ +P +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTAM 351
Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
+D T A L ++ RE + + L A +LG+ +
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAGA 411
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 412 QGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 463
>gi|170025371|ref|YP_001721876.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
gi|229558805|sp|B1JHJ1|SYC_YERPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169751905|gb|ACA69423.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis YPIII]
Length = 461
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 257/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGVEFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADDDEVAKIEALIKQRNDARSSKDWALADAARDQLNDLGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|332982044|ref|YP_004463485.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
gi|332699722|gb|AEE96663.1| cysteinyl-tRNA synthetase [Mahella australiensis 50-1 BON]
Length = 467
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 179/487 (36%), Positives = 261/487 (53%), Gaps = 56/487 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL RK F+ ++ + + MYVCGPTVYD+ HIGNARP++VFD L R L Y
Sbjct: 3 RLYNTLTRKQEIFEPLNDNTVTMYVCGPTVYDYFHIGNARPLVVFDTLRRYLEYRGY--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N TDIDDK+I+RA QE ++ + + Q++ D L PRA
Sbjct: 61 VKYVQNFTDIDDKMIKRANQEGITV------KELGDRFIQEYFVDAKGLNIRPADVHPRA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T HI MI I+ +I G AY + + FDTS P YG S + +E + G RV K
Sbjct: 115 TEHITDMIEFIKKLIDKGVAYVVDGNVYFDTSKFPQYGKLSHQDFNEIEAGARVEVNESK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK P EP W+SPWG GRPGWH+ECS MS YLG DIHGGG DLIFPHH
Sbjct: 175 RNPMDFVLWKAQKPGEPAWDSPWGMGRPGWHMECSVMSMKYLGDTIDIHGGGQDLIFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + A W+HNG++N++G+KMSKS GNF T+ ++ + +
Sbjct: 235 ENEIAQSESLTG-KPLARFWLHNGYINVDGQKMSKSLGNFFTVRDI-------SKEYDLE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------------- 348
+R+ ML++HYR PI+F+ Q L +A+ L++ I
Sbjct: 287 TVRIFMLLSHYRSPINFSHQLLEQAKNALARLYNVKFRLEDIKNSSDISAVSEQERAFIN 346
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHIL 392
+ A+ +D+NT SA+ + LA++ + + ++
Sbjct: 347 DMPRYRQKFIEAMDDDMNTASAMGVIFDLAKDVNILMADGASAEFASEASDMLKELTGVM 406
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ ++ + IE+++Q+R + +++AD IR +L++ G +LED
Sbjct: 407 GLLYKDSACSQ-LDNEIEQMIQKRQQARANRDWATADRIRDELKAMGIVLEDT------P 459
Query: 453 RMTRWKQ 459
+ RWK+
Sbjct: 460 QGVRWKR 466
>gi|85058683|ref|YP_454385.1| cysteinyl-tRNA synthetase [Sodalis glossinidius str. 'morsitans']
gi|109894945|sp|Q2NV45|SYC_SODGM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|84779203|dbj|BAE73980.1| cysteinyl-tRNA synthase [Sodalis glossinidius str. 'morsitans']
Length = 457
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 178/478 (37%), Positives = 254/478 (53%), Gaps = 44/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY E
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVTRYLRYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDI+DKII RA + + +T + + D +L L P +P
Sbjct: 61 --VNYVRNITDIEDKIIRRAAENG------ETFHQLTERMISEMHSDFDQLNILRPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I +I L+ +I HAY AN +++F S +YG SR+ +++ + G RV
Sbjct: 113 RATHYIDAIIELVGQLIDRDHAYVAANGDVMFAVDSDSDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DLIF
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNGRQLGHHFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N+W+H G + ++ KMSKS GNF T+ ++L R +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNVWMHAGMVMVDREKMSKSLGNFFTVRDVL-------RYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R ++ HYR ++++ + L +A L + ++
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIALRGTDATAVPAGGDHFVAQFIA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHILGIEVCKEHL----- 401
A+ +D NT A L +ARE + + A +LG+ +
Sbjct: 345 AMDDDFNTPKAYSVLFDIAREVNRLKSEQPAAQGMAATLRQLAGVLGLLEQEPAAFLQQG 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ IE L+Q+R K ++++ AD R +L + G +LED G + T W++
Sbjct: 405 AAEDNVMIEALIQQRNDARKARQWALADEARDKLTALGIVLED------GPQGTTWRR 456
>gi|330897806|gb|EGH29225.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. japonica str.
M301072PT]
Length = 460
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 259/479 (54%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|146307594|ref|YP_001188059.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
gi|187629851|sp|A4XVG1|SYC_PSEMY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145575795|gb|ABP85327.1| cysteinyl-tRNA synthetase [Pseudomonas mendocina ymp]
Length = 461
Score = 414 bits (1064), Expect = e-113, Method: Composition-based stats.
Identities = 189/480 (39%), Positives = 262/480 (54%), Gaps = 46/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL + FQ + + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR
Sbjct: 1 MALSIYNTLTKTKDVFQPLVGNQVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRQRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII+RA + + + + +D RL+ L P +
Sbjct: 61 D--VTYVRNITDIDDKIIKRANENG------EPFEALVERMIAAMHEDEARLSVLRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI M +IQ +I G+AY N ++ + + YG SRRKIDE K+G R+
Sbjct: 113 PRATGHIAGMHQMIQTLIDKGYAYAPGNGDVYYRVTRFETYGKLSRRKIDELKIGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+ LG+ FDIHGGG DL+
Sbjct: 173 DEIKEDPLDFVLWKGAKPGEPSWDSPWGKGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A ++ AN W+H G + ++G KMSKS GNF TI E+LE
Sbjct: 233 FPHHENEIAQSEAATG-KQYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-------- 353
+ V+R ++ +HYR PI+++ + L EA+ L ++ PA
Sbjct: 285 YHPEVVRYLLVSSHYRSPINYSEESLKEAKGALERFYNGLKGLPEAAPAGGEAYVERFGV 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH----- 400
A+ +D N+ A L ++ RE + + L A +LG+ +
Sbjct: 345 AMDDDFNSPEACAVLFEMIREVNRLRESDVQAAAGLAAQLKQLASVLGVLQLEPEAFLQA 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+ RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 GAAGKVDAAEVEALIAARLQARADKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 458
>gi|325272290|ref|ZP_08138699.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
gi|324102572|gb|EGC00010.1| cysteinyl-tRNA synthetase [Pseudomonas sp. TJI-51]
Length = 460
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR E
Sbjct: 1 MLTIYNTLTKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ESFDALTARMIDAMHEDERRLNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDVDAAAGLAGRLRELGDVLGVLQLDADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEGLIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457
>gi|288959132|ref|YP_003449473.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
gi|288911440|dbj|BAI72929.1| cysteinyl-tRNA synthetase [Azospirillum sp. B510]
Length = 458
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 213/478 (44%), Positives = 287/478 (60%), Gaps = 42/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ + P ++ MYVCGPTVYD AHIGNARP++VFD+L+RLL Y
Sbjct: 1 MPLDLYNTLTRRKERFEPLRPDHVGMYVCGPTVYDTAHIGNARPVVVFDLLFRLLSRLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKII+RAR + I +T++ T F D L L PT +
Sbjct: 60 -PAVTYVRNITDVDDKIIDRARDSG------EPIDALTARTTDLFHADMDALNALRPTIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI LI +I G+AY A ++F S+P+YG SRR +++ G RV
Sbjct: 113 PRATQHIGQMIALIATLIERGNAYAAEGHVLFSVPSMPSYGQLSRRSLEDMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++ +DF+LWK S+P +PGW+SPWGRGRPGWHIECSAM+ +LG FDIHGGGLDLIF
Sbjct: 173 PYKRDASDFVLWKPSSPDQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA+ ++ A W+HNGF+ +EG KMSKS GNF T+++LL+ +
Sbjct: 233 PHHENEIAQSCCANGTDRLARTWVHNGFVTVEGEKMSKSLGNFFTVHDLLD-------EF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYN 357
P IRL +L HYR+P+DFT + + +A+ L +W Q + + + VL+AL +
Sbjct: 286 PGEAIRLTLLSAHYRQPLDFTREGIRQAKGALDRWYQALRGDPAPAAAAVPFDVLAALED 345
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI------LGIEVCKEHL---------- 401
DLN+ AI LH+LA K A + LG+
Sbjct: 346 DLNSPLAIAHLHELATAVNKARSDAEKAAAKGALLAAGQQLGLLRQDPEAWFRWAPTGGV 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E+L+ +R K F+ AD IRK+L KG +LED G + T WK+
Sbjct: 406 EGLSDAEVERLIIDRKTARAAKNFAEADRIRKELADKGIVLED------GPQGTSWKR 457
>gi|71736729|ref|YP_273919.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|109894921|sp|Q48L06|SYC_PSE14 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71557282|gb|AAZ36493.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 460
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 253/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|51595384|ref|YP_069575.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186894407|ref|YP_001871519.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
gi|61216168|sp|Q66DK9|SYC_YERPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558803|sp|B2K7N2|SYC_YERPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|51588666|emb|CAH20275.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis IP 32953]
gi|186697433|gb|ACC88062.1| cysteinyl-tRNA synthetase [Yersinia pseudotuberculosis PB1/+]
Length = 461
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 257/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNDLGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|28870897|ref|NP_793516.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|301384135|ref|ZP_07232553.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
gi|302059502|ref|ZP_07251043.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
gi|302134322|ref|ZP_07260312.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato NCPPB
1108]
gi|37999386|sp|Q87YQ2|SYC_PSESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|28854146|gb|AAO57211.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tomato str.
DC3000]
gi|331018326|gb|EGH98382.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 460
Score = 414 bits (1063), Expect = e-113, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 256/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ +
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKQDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF T+ ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYANAWLHCGMIRINGEKMSKSLNNFFTLRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFTTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRETDVAAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AQGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|167769106|ref|ZP_02441159.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
17241]
gi|167668746|gb|EDS12876.1| hypothetical protein ANACOL_00429 [Anaerotruncus colihominis DSM
17241]
Length = 462
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 255/486 (52%), Gaps = 54/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF I+P +RMY CGPTVY++ HIGNARP+ VFD L R L Y +
Sbjct: 1 MKIFNTLTRQKEEFVPIEPGKVRMYACGPTVYNYIHIGNARPICVFDTLRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDK+I +A +E ++ + + +++ DT L PR
Sbjct: 60 -VTFVQNFTDIDDKLINKANEEGITV------REVAERYIGEYMTDTKGLGIRPADIHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I +++ + G AYE + + F + YG S + ++E + G R+
Sbjct: 113 ATENIDTIINMVKTLEEKGFAYERDGSVYFRSRRFEEYGKLSHQPLEELEAGARIDVSDK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + P EP W SPWG GRPGWHIECSAM +LG DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAAKPGEPSWPSPWGEGRPGWHIECSAMIRRHLGDTIDIHCGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C E + W+HNG++N++ RKMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSECCTGAE-YVHYWMHNGYINVDNRKMSKSLGNFFTVREVAE-------KFGY 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------------WPQTSTSK 344
I+ ML HYR PI+++++ + + L + W
Sbjct: 285 EPIKFMMLQAHYRSPINYSLEVIEQCRAALERLHNCRDSLDFALESALGQGDWHAFREKM 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGI 394
+ A+ +DLNT I AL ++AR+ + F+ +LG+
Sbjct: 345 DARAAQFVEAMDDDLNTADGIAALFEMARDINTYIAQPQPEEAVAYAVKRFDELCGVLGL 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ +K++ +E L+ ER K K F+ AD IR QL G +L+D +
Sbjct: 405 LYNR--ASKDLDSEVEALIAERQAARKAKDFARADAIRDQLAGMGILLKDT------PQG 456
Query: 455 TRWKQK 460
+W +K
Sbjct: 457 VQWSRK 462
>gi|309972789|gb|ADO95990.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2846]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFAETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAVRLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K +++AD R +L + G +LED N T W++
Sbjct: 405 GSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|238790851|ref|ZP_04634606.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
gi|238721068|gb|EEQ12753.1| Cysteinyl-tRNA synthetase [Yersinia frederiksenii ATCC 33641]
Length = 473
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 184/484 (38%), Positives = 258/484 (53%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 12 PMLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY 71
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+TYVRN+TD+DDKII+RA + N+ +TS+ + KD L P +
Sbjct: 72 --SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTSRMLAEMHKDFDALNLERPDLE 123
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HIP++I L + +I HAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 124 PRATHHIPEIIELTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEV 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+
Sbjct: 184 ADVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLM 243
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L
Sbjct: 244 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------Y 295
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 296 YDAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFR 355
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 356 AAMDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQ 415
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IE L+++R K ++ AD R QL G +LED G + T
Sbjct: 416 SGAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTT 469
Query: 457 WKQK 460
W++K
Sbjct: 470 WRRK 473
>gi|68248628|ref|YP_247740.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|319896490|ref|YP_004134683.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
gi|81336945|sp|Q4QPG7|SYC_HAEI8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|68056827|gb|AAX87080.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 86-028NP]
gi|317431992|emb|CBY80340.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3031]
Length = 459
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K +++AD R +L + G +LED N T W++
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWATADAARNELIAMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|220934112|ref|YP_002513011.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
gi|254781696|sp|B8GNT5|SYC_THISH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219995422|gb|ACL72024.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. HL-EbGR7]
Length = 460
Score = 413 bits (1062), Expect = e-113, Method: Composition-based stats.
Identities = 186/485 (38%), Positives = 262/485 (54%), Gaps = 55/485 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+N+L R+ F ++P +RMYVCG TVYD+ H+G+AR ++VFDV+YR L+ +
Sbjct: 1 MLQIHNSLTRRKETFTPMEPGRVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLKALGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY+RNITDIDDKII RA + + I +T + +D L L P+ +P
Sbjct: 61 --VTYIRNITDIDDKIIRRAAENG------EDIRALTDRFIAAMHEDAEALGVLPPSAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI M+ +I ++ G+AY N ++ + + YG S +++++ + G RV
Sbjct: 113 RATEHIDGMLAMIGTLVERGYAYAGDNGDVYYAVAKFEPYGRLSGKRLEDLRAGERVAPD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+HYLG FDIHGGG DL F
Sbjct: 173 EAKRDPLDFVLWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTHYLGNHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A E N W+HNGF+ + KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEAAT-CEHFVNYWMHNGFVRVNEEKMSKSLGNFFTVREVLAR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
PA V+R +L +HYR P++++ + L A L++ +DP +
Sbjct: 285 PAEVVRYFILSSHYRSPLNYSDEPLDAARAGLTRLYTALRGVQAVDPAGQGEGYRRRFQA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------------HILGI 394
A+ +D NT A+ L +ARE + D P A L
Sbjct: 345 AMDDDFNTPVAMAVLFDIARELNRLRDEDPAGAAPLAGLLRELGGMLGLLAGDPEAFL-- 402
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
AIE L+ +RL K K F+ AD IR +L +G +LED G
Sbjct: 403 --KGGEAGDLDEAAIEALIAQRLAARKAKDFAEADRIRDELAGQGVVLED------GPGG 454
Query: 455 TRWKQ 459
T W++
Sbjct: 455 TTWRR 459
>gi|330952785|gb|EGH53045.1| cysteinyl-tRNA synthetase [Pseudomonas syringae Cit 7]
Length = 460
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 256/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIGAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPLAEPAGGEAFVERFSAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVNAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|270263639|ref|ZP_06191908.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
gi|270042523|gb|EFA15618.1| cysteinyl-tRNA synthetase [Serratia odorifera 4Rx13]
Length = 461
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 176/483 (36%), Positives = 250/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII RA + ++ +T++ + D L P +P
Sbjct: 60 -SLNYVRNVTDVDDKIIRRATENG------ESCDQLTARMLAEMHADFDSLLIERPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I + Q +I HAY +N +++F S P YG SR+ +D+ + G RV
Sbjct: 113 RATQHIAEIIEITQRLIDRDHAYVASNGDVMFSIDSDPQYGLLSRQDLDQLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMIDREKMSKSLDNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGTDANAQPAGGEAFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A AL LARE + + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSALFDLAREVNRLKGEDMAAANGLAAELRKLAKVLGLLQQEPEQFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K K ++ AD R +L +LED G + T W
Sbjct: 405 GAQADDGEVAEIEALIKQRNDARKAKDWALADAARDRLNEMSIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|26989624|ref|NP_745049.1| cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
gi|37999406|sp|Q88IU4|SYC_PSEPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|24984507|gb|AAN68513.1|AE016483_4 cysteinyl-tRNA synthetase [Pseudomonas putida KT2440]
Length = 460
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR E
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ETFDALTARMIDAMHEDERRLNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR++I++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKRIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDVEAAAGLAGRLRELGDVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEGLIQARLKARADKNWAESDRIRDQLTAMGVVLEDSK------GTTTWR 457
>gi|229846997|ref|ZP_04467103.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
gi|229810081|gb|EEP45801.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 7P49H1]
Length = 459
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 258/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+ +
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K +++AD R +L + G +LED G T W++
Sbjct: 405 GSNDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|319775019|ref|YP_004137507.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|329123076|ref|ZP_08251646.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
gi|317449610|emb|CBY85816.1| cysteinyl-tRNA synthetase [Haemophilus influenzae F3047]
gi|327471631|gb|EGF17073.1| cysteine--tRNA ligase [Haemophilus aegyptius ATCC 11116]
Length = 459
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 258/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G+R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGSRIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K +++AD R +L + G +LED G T W++
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|66044980|ref|YP_234821.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
gi|75502675|sp|Q4ZVN9|SYC_PSEU2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|63255687|gb|AAY36783.1| Cysteinyl-tRNA synthetase, class Ia [Pseudomonas syringae pv.
syringae B728a]
Length = 460
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 260/479 (54%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIEAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR ++ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGK------GGTTWR 457
>gi|238795438|ref|ZP_04638953.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
gi|238720557|gb|EEQ12358.1| Cysteinyl-tRNA synthetase [Yersinia mollaretii ATCC 43969]
Length = 461
Score = 413 bits (1061), Expect = e-113, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 258/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + + +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIENS------ETCEQLTTRMLAEMHKDFDALNLQRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I + + +I HAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIEMTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWQSPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPKGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTDNDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|271501481|ref|YP_003334507.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
gi|270345036|gb|ACZ77801.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech586]
Length = 461
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 179/483 (37%), Positives = 254/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + + I +T++ + D L L+P +P
Sbjct: 61 --VKYVRNITDIDDKIIRRATENG------ETIEQLTNRMIDEMHTDFRALNILSPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I ++I L++ +I HAY N +++F + P YG SR+ +++ K G RV
Sbjct: 113 RATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSTCAHGGD-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLS-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR +++T + L +A L + +
Sbjct: 285 DAETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASVPAAGGEAFEHRFRD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKADDAAAASGLASALRQLAGVLGLLEHDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R + K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQADDSEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|293392469|ref|ZP_06636789.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
gi|291424871|gb|EFE98080.1| cysteine-tRNA ligase [Serratia odorifera DSM 4582]
Length = 461
Score = 412 bits (1060), Expect = e-113, Method: Composition-based stats.
Identities = 176/483 (36%), Positives = 250/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRN+TD+DDKII RA + + +T + + D L P +P
Sbjct: 61 L--NYVRNVTDVDDKIIRRAAENG------ETCDQLTGRMLAEMHADFDALLIERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L + +I GHAY +N +++F S +YG SR+ +D+ + G RV
Sbjct: 113 RATQHIAEIIELTERLIARGHAYVASNGDVMFAIDSDADYGLLSRQDLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLG-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDPLATPDGGAEFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A AL LARE + + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSALFDLAREVNRLKNEDMAAANAMAAELRKLAKVLGLLQQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQADDGEVAEIEALIKQRNDARKSKDWALADAARDRLNEMGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|320325346|gb|EFW81413.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
B076]
gi|320327670|gb|EFW83678.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330882429|gb|EGH16578.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 460
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +R+YVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRIYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPAAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDVTAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|205372089|ref|ZP_03224906.1| cysteinyl-tRNA synthetase [Bacillus coahuilensis m4-4]
Length = 467
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 164/489 (33%), Positives = 247/489 (50%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL RK F ++ ++MYVCGPTVY++ HIGNARP IV+D + R L Y
Sbjct: 1 MSIQLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+DDK+I+ A + +P I + + +DT L C
Sbjct: 61 --AVNFVSNFTDVDDKLIKAANELGEDVPT------IAERFIDAYFEDTAALGCSKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T +I +I I ++ G+AYE+ ++ + T YG S + I++ + G R+
Sbjct: 113 PRVTENIDIIIEFISALMDKGYAYESQGDVYYRTKKFEGYGKLSHQPIEDLQSGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W SP+G+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDPLDFVLWKAAKEGEIYWSSPFGKGRPGWHIECSAMVRKYLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIDNEKMSKSLGNFVLVHDII-------KET 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R ML HYR PI+++ + + L + T
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSADLVENTKTALDRLRTTYQNITYRKESSVNLGEGTEKWV 344
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + A+ +D NT +AI L L+++ + F
Sbjct: 345 GQIAELKKQFIQAMDDDFNTANAISVLFDLSKQGNYYLMEENTEVRVLDEFTQTFEELFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+++ E + + IEKL++ER+ K F +D IR +L+ +LED
Sbjct: 405 VLGLKLSGEA--ELLDEEIEKLIEERIQARKNCDFKRSDEIRDKLKEMNIVLEDT----- 457
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 458 -PQGTRWKR 465
>gi|125974555|ref|YP_001038465.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004086|ref|ZP_05429071.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281419079|ref|ZP_06250096.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|187629806|sp|A3DH43|SYC_CLOTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|125714780|gb|ABN53272.1| cysteinyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255992009|gb|EEU02106.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|281407228|gb|EFB37489.1| cysteinyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|316941673|gb|ADU75707.1| cysteinyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
Length = 468
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 175/483 (36%), Positives = 256/483 (53%), Gaps = 53/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK EF ID ++MY CGPTVY++ HIGNARP I+FD L R L Y
Sbjct: 1 MRLYNTLTRKKEEFHPIDEKEVKMYSCGPTVYNYFHIGNARPFIIFDTLRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I+RA +E ++ + K ++ D L T PR
Sbjct: 59 NVKFVQNFTDIDDKMIKRANEEGITV------KELADKFINEYFVDAKGLGIKEATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I +I+ + G AY + ++ F YG S + +++ ++G R+
Sbjct: 113 ATENIDAIIEMIKKLEEKGFAYNVDGDVYFSARKFTEYGKLSHQSLEDLELGARIDVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK P EP W+SPWG+GRPGWHIECSAM++ YLG+ DIH GG DL+FPH
Sbjct: 173 KKDPMDFALWKAQKPGEPAWDSPWGKGRPGWHIECSAMANKYLGETIDIHSGGQDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A+ + A W+HNGF+N++G KM+KS GNF T+ ++ +++
Sbjct: 233 HENEIAQSEAANG-KPFARFWLHNGFINVDGEKMAKSKGNFFTVRDI-------AKTFDY 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------------- 350
VIR ML HYR PI+F+ + L +A+ L + + +
Sbjct: 285 EVIRFFMLSAHYRSPINFSAELLEQAKNGLERIYNCLDNLEYLKEHAQAEKITDSERELQ 344
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNASA 389
+ A+ +D+NT AI A+ + +E N + L +
Sbjct: 345 NRLLGIKAKFIEAMDDDINTADAIAAIFDIVKEVNTNINATSNSSKEIIDFSLSLIKELG 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI ++ K + IE+L++ R K K + +AD IR +L+ G ILED
Sbjct: 405 GVLGI--AQKSRQKVLDKEIEELIERRQKARKEKDWKTADEIRDKLKEMGIILEDTPQGV 462
Query: 450 NGQ 452
Sbjct: 463 KWT 465
>gi|227824943|ref|ZP_03989775.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226905442|gb|EEH91360.1| cysteinyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 483
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 179/504 (35%), Positives = 253/504 (50%), Gaps = 66/504 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNT+ RK EF + P + +YVCG T Y+ HIGNARP +V+DV++R L +
Sbjct: 1 MSTIRVYNTMTRKKEEFVPLHPGKVGIYVCGVTPYNHPHIGNARPFVVWDVIHRFLEHEG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VT+V+N TD+DDKII A +E + +I ++ + + + +L
Sbjct: 61 YD--VTHVQNFTDVDDKIIREANKEGVT------WDVIANRYIKAYFEVMDKLHVRRAHV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR ++HIP +I+ +Q +I HG+ Y + ++ + +YG S R +D+ G RV
Sbjct: 113 YPRVSDHIPDIIHTVQQLIDHGYGYVVDGDVYYRVEKFEHYGELSGRTLDDMMAGARVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK + P EP W+SPWG+GRPGWHIECS MS+ YLG FD HGGG DLI
Sbjct: 173 DERKENPMDFALWKSAKPGEPSWDSPWGKGRPGWHIECSTMSTKYLGSSFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A W+HNGF+ + KMSKS GNF T+ ++L +
Sbjct: 233 FPHHENEIAQSEGATCCHPFVRYWVHNGFITINEEKMSKSLGNFFTVLDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ V+R +L THYR P+DF+ RL EA L + + + +
Sbjct: 286 YEPEVLRYFILQTHYRSPLDFSDARLKEASRSLERLRTAAQNLTELKGVISVGPDEDSLA 345
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLP 383
+ L A+ +D NT AI L L +E H +
Sbjct: 346 LREKVSGFVESFLEAMRDDFNTSLAISYLFALGKEINILHQSVMTGGQKPDGKLVDMMDK 405
Query: 384 IFNASAHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ I+GI + AIE L+ ER K K F AD IR +L
Sbjct: 406 AWKEMTSIIGILEEDPGAKTEAVKDADEDAAAIESLIAERQEARKAKDFKKADAIRDELA 465
Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
KG +LED + RWK++
Sbjct: 466 QKGILLEDT------PQGVRWKRQ 483
>gi|313110488|ref|ZP_07796373.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
gi|310882875|gb|EFQ41469.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 39016]
Length = 460
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 181/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + + L A +LG+ +
Sbjct: 345 MDDDFNTAGACAVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|251788870|ref|YP_003003591.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247537491|gb|ACT06112.1| cysteinyl-tRNA synthetase [Dickeya zeae Ech1591]
Length = 461
Score = 412 bits (1059), Expect = e-113, Method: Composition-based stats.
Identities = 181/483 (37%), Positives = 257/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I +T++ + D L L+P +P
Sbjct: 61 --VKYVRNITDIDDKIIKRATENG------ETIEQLTNRMIGEMHTDFQALNILSPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I ++I L++ +I HAY N +++F + P YG SR+ +D+ K G RV
Sbjct: 113 RATHYIAEIIELVEKLIARRHAYVADNGDVMFSVDTAPGYGVLSRQDLDQLKAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSTCAHGGD-YVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLT-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A IR ++ HYR +++T + L +A L + + +
Sbjct: 285 DAETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDASASAAGGEAFERRFRD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A +LG+ C L
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAMLRQLAGVLGLLECDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R + K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|78485268|ref|YP_391193.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
gi|109894958|sp|Q31H54|SYC_THICR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78363554|gb|ABB41519.1| cysteinyl-tRNA synthetase [Thiomicrospira crunogena XCL-2]
Length = 456
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 182/477 (38%), Positives = 260/477 (54%), Gaps = 42/477 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R+ F I P+ + +YVCG TVYD+ H+G+AR M+VFD + R LR
Sbjct: 1 MALKIYNTETRQKETFTPIQPNKVGLYVCGVTVYDYCHVGHARVMVVFDTVVRHLRSLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII+RA + ++I +TS+ +D L L P +
Sbjct: 61 D--VTYVRNITDIDDKIIQRALENK------ESIQSLTSRFIDAMHEDEKALNVLRPDME 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT ++ ++ +I +I AY N ++ F + +YG S + I+E G+RV
Sbjct: 113 PKATEYMDEIETMISTLIEKDFAYPAENGDVYFHVKADDDYGRLSGKNIEELDSGSRVEI 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF+LWK S EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGGLDL
Sbjct: 173 NSVKKDPLDFVLWKASKENEPAWQSPWGDGRPGWHIECSAMSTKCLGNHFDIHGGGLDLS 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H GF+ ++ KMSKS GNF TI E+L +
Sbjct: 233 FPHHENEIAQSECATGEH-YVNSWMHCGFVRIDDEKMSKSLGNFFTIREVL-------KQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVL 352
+ VIR +L +HYR P++++ + L A+ + + Q ++ ++ +
Sbjct: 285 YHPEVIRYFLLASHYRSPVNYSEENLDVAKASVGRLYSALELVPADQAEPAESKLEAEFM 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC--------KEHLN 402
+A+ +D NT A+ L +LA+E K L + A+ +G+ + +
Sbjct: 345 AAMNDDFNTPQAMAVLFELAKEVNKQKSPGLAALLKKLANQIGLLEQTAESFFKSQPSDS 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE L+ ER K K FS +D IR +L ++G L D T W++
Sbjct: 405 DLTDEMIEALIVERAEARKAKDFSRSDEIRDELLAQGIELLDS------AEGTSWRK 455
>gi|15596992|ref|NP_250486.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|218892253|ref|YP_002441120.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
gi|254240136|ref|ZP_04933458.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|21264027|sp|Q9I2U7|SYC_PSEAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735063|sp|B7VB84|SYC_PSEA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|9947777|gb|AAG05184.1|AE004605_6 cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAO1]
gi|126193514|gb|EAZ57577.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa 2192]
gi|218772479|emb|CAW28261.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa LESB58]
Length = 460
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 181/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + + L A +LG+ +
Sbjct: 345 MDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|91976542|ref|YP_569201.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
gi|123721921|sp|Q139D9|SYC_RHOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91682998|gb|ABE39300.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
Length = 463
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 215/467 (46%), Positives = 289/467 (61%), Gaps = 18/467 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL ++ +F +DPS +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MALRLYDTLTKEKRDFAPLDPSRVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA +++P +P+N++I +T + +QF D L CL PT +
Sbjct: 61 ENHVKYVRNITDVDDKINDRAARDYPGLPLNESIRKVTEQTERQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-------SSIPNYGSFSRRKIDEQKM 175
PRAT HI +M +I ++ G AY A++ ++F S +P YG+ + R +DE
Sbjct: 121 PRATEHIGEMRTIIDRLVEGGFAYVADDHVLFSPGAMNAADSVLPRYGALANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP---WGRGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP +GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA + A W+HNGFL +EG KMSKS GNF+TI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTSRMAQTWMHNGFLQVEGEKMSKSLGNFVTIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV- 351
T+KFGGR W +RLAML THYR+PID+T L EAE + W +
Sbjct: 301 ATEKFGGRKWDGATLRLAMLKTHYRQPIDWTADALHEAEKAIFDWSDFTKDATPGSCDDV 360
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
++AL +DLNT I LH L R + +LGI ++ +
Sbjct: 361 IAALTDDLNTPKMIAELHALRRAG-----KADELCGAMELLGISPVVRGT-VDLDATAKS 414
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L+ R K F +D IR +L + G ++D K+ D +T W+
Sbjct: 415 LIDARTAARARKDFKESDRIRDELAAMGIAIKDGKDSDGKP-VTTWE 460
>gi|238791509|ref|ZP_04635147.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
gi|238729125|gb|EEQ20641.1| Cysteinyl-tRNA synthetase [Yersinia intermedia ATCC 29909]
Length = 461
Score = 412 bits (1058), Expect = e-113, Method: Composition-based stats.
Identities = 184/483 (38%), Positives = 259/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N++ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRALEN------NESCEQLTTRMLAEMHKDFDALNLKRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L + +I HAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIALTERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWASPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A AL +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSALFDIAREVNRLKTEDITAANGLAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTNDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|238762909|ref|ZP_04623877.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
gi|238698920|gb|EEP91669.1| Cysteinyl-tRNA synthetase [Yersinia kristensenii ATCC 33638]
Length = 461
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 185/483 (38%), Positives = 259/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLKRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L + +I HAY AN +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIELTERLIAREHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKAEDMTAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|152989578|ref|YP_001348862.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
gi|187629850|sp|A6V727|SYC_PSEA7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150964736|gb|ABR86761.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PA7]
Length = 460
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGRFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEHVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + D L A +LG+ +
Sbjct: 345 MDDDFNTAGACSVLFELAREVNRLRDSDLPAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|325578800|ref|ZP_08148847.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
gi|325159624|gb|EGC71756.1| cysteine--tRNA ligase [Haemophilus parainfluenzae ATCC 33392]
Length = 482
Score = 411 bits (1057), Expect = e-113, Method: Composition-based stats.
Identities = 183/483 (37%), Positives = 259/483 (53%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +KI+NTL R+ F+ I + MYVCG TVYD HIG+ R + FDV+ R LR
Sbjct: 22 KNMLKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLG 81
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ TYVRNITD+DDKII+RA + + + + Q+ KD L L P
Sbjct: 82 YDL--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDF 133
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +D+ + G R+
Sbjct: 134 EPRATHHIPEIIEIVEKLIARGHAYVANNGDVMFDVESFKEYGKLSRQDLDQLQAGARIE 193
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 194 INEIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 253
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA + N WIH+G + ++ KMSKS NF TI ++L
Sbjct: 254 MFPHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLSNFFTIRDVL-------N 305
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAV 351
+ A +R +L HYR ++++ + L A+ L + + A
Sbjct: 306 HYNAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVEAF 365
Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL-- 401
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 366 REAMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLCELAGILGLLQQDPEKFL 425
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K +++AD R +L + G +LED N T W
Sbjct: 426 QAGSDDDEVAKIEALIKQRNEARAAKDWTAADAARNELTAMGIVLEDGPN------GTTW 479
Query: 458 KQK 460
+++
Sbjct: 480 RKQ 482
>gi|320016265|gb|ADV99836.1| cysteinyl-tRNA synthetase [Yersinia pestis biovar Medievalis str.
Harbin 35]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats.
Identities = 179/483 (37%), Positives = 256/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P E WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGESRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKNEDMAAANGLAAELRKLAQVLGLLEQDPELFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADDDEVAKIEALIKQRNDARSSKNWALADAARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|123443257|ref|YP_001007231.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|187470968|sp|A1JNP9|SYC_YERE8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|122090218|emb|CAL13084.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 258/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRALEN------NETCEQLTTRMLVEMHKDFDALNLKRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L + +I HAY AN +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIALTERLIARNHAYVAANGDVMFSVESDPDYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A++LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKTEDITAANALAAELRKLAYVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTDDDEVAKIEVLIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|318604716|emb|CBY26214.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica Y11]
Length = 461
Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats.
Identities = 184/483 (38%), Positives = 258/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLQRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L + +I HAY AN +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLV-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTVW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|170721588|ref|YP_001749276.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
gi|229558806|sp|B1J805|SYC_PSEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169759591|gb|ACA72907.1| cysteinyl-tRNA synthetase [Pseudomonas putida W619]
Length = 460
Score = 411 bits (1057), Expect = e-112, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR E
Sbjct: 1 MLTIYNTLSKTKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ETFDALTARMIDAMHEDERRLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP W+SPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPYWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++L+ +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLDV-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEEFVERFSVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDPDAAAGLAGRLRELGDVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLQARADKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457
>gi|167033877|ref|YP_001669108.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
gi|187629853|sp|B0KUU0|SYC_PSEPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166860365|gb|ABY98772.1| cysteinyl-tRNA synthetase [Pseudomonas putida GB-1]
Length = 460
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR +
Sbjct: 1 MLTIYNTLSKAKETFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRKSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------ETFDALTARMIDAMHEDERRLNILPPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFVGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 EAKQDPLDFVLWKGVKPGEPSWESPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A ++ AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KQYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +A+ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDAKGALERFYHALRGLPRVAAKGGEAFVERFSMA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + D L +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRDSDLEAAAGLAGRLRELGDVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEGLIQARLQARTDKNWAESDRIRDQLTAMGVVLEDSK------GATTWR 457
>gi|311695080|gb|ADP97953.1| cysteinyl-tRNA synthetase [marine bacterium HP15]
Length = 462
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 185/483 (38%), Positives = 261/483 (54%), Gaps = 49/483 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYNTL ++ EF+ I+P +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+ +
Sbjct: 1 MIRIYNTLTQQKEEFRPIEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVITRYLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKI+ RA + + +T + + +D RL L+P +P
Sbjct: 61 --VNYVRNITDIDDKILRRADENG------EPYDELTDRMIKAMHEDEARLGVLSPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I +I +I GHAY N ++ F S +YG S++K+++ G RV +
Sbjct: 113 RATAYIDEIIAMIHKLIAGGHAYAADNGDVYFAVDSFDDYGKLSKKKLEDLLAGARVDVQ 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK + E W SPWG GRPGWHIECSAMS+ LG+ FDIHGGG DL+F
Sbjct: 173 EAKRSPADFALWKAAKAGEVSWPSPWGDGRPGWHIECSAMSTCCLGETFDIHGGGPDLLF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H G + + KMSKS GNF TI E++E +
Sbjct: 233 PHHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIME-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVL 352
PA V+R ++ +HYR +D++ + L EA L++ + D
Sbjct: 285 PAEVVRYFLVSSHYRSQVDYSEENLAEAGRTLTRLYHALRGIVPAKAADVPESEHDERFA 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHL-- 401
A+ +D NT AI LH +A E + I +LG+
Sbjct: 345 EAMDDDFNTAGAIAVLHAVANEINQHRRDGREDDAKQSAAILVRLGGVLGLLQQDPEAFF 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IE ++Q R K K F+ AD IR +L KG IL+D + T
Sbjct: 405 QADTGGELSAEDIEAMIQARADARKAKNFAEADRIRDELLEKGIILDDSR------EGTT 458
Query: 457 WKQ 459
W++
Sbjct: 459 WRK 461
>gi|225026000|ref|ZP_03715192.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
gi|224956650|gb|EEG37859.1| hypothetical protein EUBHAL_00238 [Eubacterium hallii DSM 3353]
Length = 464
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 186/487 (38%), Positives = 250/487 (51%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL ++ EF + + MYVCGPTVY++ HIGNARPMIVFD + R Y +
Sbjct: 1 MKLYNTLTKQKEEFVPVHEGKVGMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + + KD L TH P+
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGV------PASEISERFIAECKKDMEGLNIEPATHNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI +I +I G+AYE N + F T NYG S++ +D+ + G R+
Sbjct: 113 ATEEIDGMIAMISTLIEKGYAYEKNGTVYFRTRKFKNYGQLSKKNLDDMRAGIRIAVSDE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF+LWK EP W SPWG GRPGWHIECS MS Y+G DIH GG DL+FPH
Sbjct: 173 KEDAMDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + EK AN W+HN FLN++ +KMSKS GNF T+ E+ +P
Sbjct: 233 HENEIAQSEACND-EKFANYWMHNAFLNIDNKKMSKSAGNFFTVREI-------SEKYPL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
VIR ML HYR P++F+ + ++ L +
Sbjct: 285 QVIRFFMLSAHYRSPLNFSDTLVEASKNGLERILTAIDHLREVIAAAPEGELNVEDQKNL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHIL 392
+ +A+ +D NT AI A+ +L + + LL I IL
Sbjct: 345 EEANALKAKYEAAMEDDFNTADAIAAIFELVKLANVTAESGSKAYAQQLLDIIVQLCDIL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
GI E + + IE L++ER K K F+ AD IR L KG ILED +
Sbjct: 405 GIIT--EKKEELLDDDIEALIEERQAARKAKNFARADEIRDLLADKGIILEDTR------ 456
Query: 453 RMTRWKQ 459
+WK+
Sbjct: 457 AGVKWKR 463
>gi|330959375|gb|EGH59635.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. maculicola str.
ES4326]
Length = 460
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 257/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ R+ + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVRDINRLRESDVAAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|37527666|ref|NP_931010.1| cysteinyl-tRNA synthetase [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|61216271|sp|Q7N0S5|SYC_PHOLL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|36787101|emb|CAE16176.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) (CysRS)
[Photorhabdus luminescens subsp. laumondii TTO1]
Length = 461
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 183/483 (37%), Positives = 253/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHPGKVGMYVCGITIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRN+TD+DDKII+RA + ++ +T + + KD L L P +P
Sbjct: 61 L--TYVRNVTDVDDKIIKRAAENS------ESCDDLTGRMLAEMYKDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L +++I GHAY N +++F S +YG SR+ + + + G RV
Sbjct: 113 RATRHIQEIIALTESLIKRGHAYVADNGDVMFSVESDQDYGLLSRQDLSQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGNHFDIHGGGADLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR +++T L +A L ++ + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEDNLKQARTALERFYTALRGTDASVPPAGGEIFEARFID 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L + RE + + L A ILG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMVREINRLKSEDMDAANGLAAELRKLAGILGLLQQQPEQFLHR 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K K + AD R QL G LED G + T W
Sbjct: 405 GIQADDEEIAKIEALIKQRNDARKNKDWPLADSARNQLNEMGIELED------GPQGTSW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|51894254|ref|YP_076945.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|61216176|sp|Q67JP9|SYC_SYMTH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|51857943|dbj|BAD42101.1| cysteinyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 471
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 172/493 (34%), Positives = 245/493 (49%), Gaps = 59/493 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYN L RK +F ++P +R Y CGPTVYD+ HIGNAR +VFD + R L Y
Sbjct: 1 MGIRIYNDLTRKKEDFVPLEPGKVRFYNCGPTVYDYFHIGNARNFVVFDTVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V+N TDIDD++I+RAR+ ++ S + + Q + D L
Sbjct: 61 Q--VTFVQNFTDIDDRMIKRARERGITV------SELAEEMIQAYFADAGALGVRPADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQK--MGTRV 179
PRAT I + I +IQ +I GHAY ++ F ++ P+YG S + ++E RV
Sbjct: 113 PRATALIDEQIAMIQQLIDKGHAYVVEGGDVYFRVTTSPDYGKLSHKNLEELVAGASERV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK P EP W +PWG GRPGWHIECSAM+ YLG DIH GG D
Sbjct: 173 DPDDRKEHPFDFALWKGQKPGEPAWPAPWGPGRPGWHIECSAMARKYLGDTIDIHAGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS + A W+HN L ++G KMSKS GNF T+ ++L
Sbjct: 233 LTFPHHENEIAQSEAVTG-KPFARYWMHNAHLMIDGAKMSKSVGNFFTVRDIL------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------ 347
+ + V+R+ +L HYR + F+ Q + + L + T + +
Sbjct: 285 KRYDGEVVRMFLLSAHYRTQLSFSDQLMEDTRRALERLYNTVANLEHLAKTAPRAEMTAE 344
Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFN 386
++A+ +D NT + + L+RE L +
Sbjct: 345 EQAVLAELSQARERFVAAMDDDFNTAEGLAVIFDLSRELNSRVKPGASAAFAEGGLALLR 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
A +LG+ K + + IE L+ R K + F+ AD IR QL + G ILED
Sbjct: 405 ELAGVLGLLERKAQPQE-LDAEIEALIAARQEARKARNFAEADRIRDQLRAMGIILEDT- 462
Query: 447 NPDNGQRMTRWKQ 459
+ RW++
Sbjct: 463 -----PQGVRWRR 470
>gi|145639628|ref|ZP_01795231.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145642163|ref|ZP_01797732.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|145271185|gb|EDK11099.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145273154|gb|EDK13031.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.4-21]
gi|309750601|gb|ADO80585.1| Cysteinyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 459
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 256/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K + +AD R +L + G +LED N T W++
Sbjct: 405 GSNDDEVAKIEALIKQRNEARAAKDWPAADAARNELTAMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|251799666|ref|YP_003014397.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247547292|gb|ACT04311.1| cysteinyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 470
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 176/491 (35%), Positives = 251/491 (51%), Gaps = 56/491 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R F +P ++MYVCGPTVYD+ HIGNARP+I FDV+ R L Y
Sbjct: 1 MNVQIYNTLTRSKEAFVPQEPGKVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEYAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y+ N TD+DDK+I++A Q ++P + K F +D L T
Sbjct: 61 D--VNYIVNFTDVDDKLIKKAEQLGLTVP------EVADKFINAFNEDIASLGVHKATLN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ ++ G+AY + ++ + TS YG S + ++E + G R+
Sbjct: 113 PRVTEHIPSIIAFIQGLVDTGYAYASEGDVYYRTSKFEEYGKLSHQNLEELQFGIRIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK P E WESPWG GRPGWHIECSAM+ YLG DIHGGG DL F
Sbjct: 173 ERKENPQDFVLWKGVKPGEINWESPWGPGRPGWHIECSAMAREYLGDTLDIHGGGHDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS ++ AN W+HNG++++ KMSKS GN IT+NEL+ +
Sbjct: 233 PHHECEVAQSEALTG-KQLANYWMHNGYIHINNEKMSKSLGNGITVNELV-------KRV 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
IR +L THYR P++FT + + +AE + + + +
Sbjct: 285 KPAAIRYFILSTHYRSPLNFTDETIAQAENSVDRIANCAANLKHRLSTFDGQSEGAAAGE 344
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
+ + + +D NT AI A+ +L E+ + + LL
Sbjct: 345 LGDRIAQLKAQFEAKMGDDFNTPDAITAVFELVTEANQYMNRADASSEGIAALLAALEQM 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+ + + I+ L+ ER K ++ AD IR L KG LED
Sbjct: 405 NTVLGLLPEAGTDAELLDDEIDALIVERTEARAAKNWARADEIRNLLTEKGIALEDT--- 461
Query: 449 DNGQRMTRWKQ 459
+ RW++
Sbjct: 462 ---PQGIRWRR 469
>gi|330975115|gb|EGH75181.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 460
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 259/479 (54%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HTEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDQITAMGVLLEDGK------GGTTWR 457
>gi|238760398|ref|ZP_04621538.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
gi|238701403|gb|EEP93980.1| Cysteinyl-tRNA synthetase [Yersinia aldovae ATCC 35236]
Length = 461
Score = 411 bits (1056), Expect = e-112, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 256/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLQRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+HIP++I L + +I HAY N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 HATHHIPEIIELTERLIARNHAYVADNGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANATPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKTEDMTAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTDDDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|332160825|ref|YP_004297402.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|325665055|gb|ADZ41699.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|330860142|emb|CBX70464.1| cysteinyl-tRNA synthetase [Yersinia enterocolitica W22703]
Length = 461
Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 184/483 (38%), Positives = 258/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLQRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L + +I HAY AN +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIELTERLIARNHAYVAANGDVMFSVESDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDVNAAPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKAEDITAANALAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQADGDEVAKIEALIKQRNDARTSKDWALADSARDQLNELGIVLED------GPQGTVW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|292491058|ref|YP_003526497.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
gi|291579653|gb|ADE14110.1| cysteinyl-tRNA synthetase [Nitrosococcus halophilus Nc4]
Length = 484
Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 182/500 (36%), Positives = 262/500 (52%), Gaps = 65/500 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L R+ EF I+P +RMYVCG TVYD H+G+AR M+VFDV+ R LR E
Sbjct: 1 MLRIYNSLTRRKEEFVPIEPGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + + I +T++ + +D L L P +P
Sbjct: 61 --VTYVRNITDIDDKIIRRAHERG------ENIQELTARYIEALHEDAEGLQILPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + +I ++Q ++ G+AY+ N +I +D S YG+ S +++DE + G RV
Sbjct: 113 RATESMEAIIAMVQRLLEQGYAYQGENGDIYYDVSHFEGYGALSGKQLDELRAGERVQVS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL F
Sbjct: 173 EAKTDPLDFVLWKAAKPNEPAWDSPWGPGRPGWHIECSAMSTQALGPHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF T+ E+LE +
Sbjct: 233 PHHENEIAQSEAATGCK-FVNYWMHNGFVRVDDEKMSKSLGNFFTVREVLE-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R +L +HYR P+++T Q+L A+ +++
Sbjct: 285 HPEVLRYFILSSHYRSPLNYTEQQLETAQAAVTRLYTALRGMPGEGISISAQGSAQELAE 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
A+ +D NT A+ L+++ + + L + + ILG
Sbjct: 345 GDDPFVQRFCEAMDDDFNTPEALALLNEIRHALNRAREEGDKDKVQYLARLLPSLGAILG 404
Query: 394 IEVCK-------------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ + E IE+L+ +R K K +++AD++R
Sbjct: 405 LLTQEPEQFLRDPRQAAAPSIVSAEGEAALSDGDIEQLIAQRTAARKNKDWAAADHLRDV 464
Query: 435 LESKGFILEDYKNPDNGQRM 454
L+ +G LED +R
Sbjct: 465 LKKQGITLEDTPTGTLWRRG 484
>gi|310826702|ref|YP_003959059.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308738436|gb|ADO36096.1| cysteinyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 465
Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 259/482 (53%), Gaps = 51/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL +K F I+ +RMY CGPTVY++ HIGNARP IVFDVL R L Y +
Sbjct: 1 MKLYNTLTQKKEAFVPIEEGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII R+ +E + + + K ++ KD L PR
Sbjct: 60 -VKFVQNFTDVDDKIINRSIEEGITA------AEVADKYIAEYFKDADALGIRRADVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
++H+P++I +I+ + G AY + + + +YG S++ ID+ K G R+
Sbjct: 113 VSDHMPEIIEMIKELEARGLAYNVDGNVYYQVDHFHDYGKLSKQSIDDLKSGARIDVNDE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK+ EP WESPWG+GRPGWHIECSAMS +LG+ DIHGGG DLIFPH
Sbjct: 173 KRSPLDFALWKKKKDGEPYWESPWGQGRPGWHIECSAMSRKHLGESIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + AN W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 HENEIAQSEGSCGCK-FANYWVHNGYININNEKMSKSKGNFFTVRDI-------AKHYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------------TS 341
V+R+ MLM HYR P++F+ + L +A+ L +
Sbjct: 285 EVVRMFMLMAHYRSPVNFSDELLGQAQNALERLYNAKYQMEYLLENNKSEAASEDEKTWM 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
+ + A+ +DLNT AI A+ +L R++ N L +F +
Sbjct: 345 DNLAQYKKGFIDAMNDDLNTADAIAAIFELVRDTNSNLSEASSREAVKAALDLFKELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+G+ + ++ +E L+ +R K K FS AD IR L +KG ILED +
Sbjct: 405 IGL--AAKEKETDLEAEVEALIAQRQEARKNKDFSLADEIRDALLAKGIILEDTREGVKW 462
Query: 452 QR 453
++
Sbjct: 463 KK 464
>gi|254234889|ref|ZP_04928212.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
gi|126166820|gb|EAZ52331.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa C3719]
Length = 460
Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + + L A +LG+ +
Sbjct: 345 MDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR +L + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGK------GGTTWR 457
>gi|104781222|ref|YP_607720.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
gi|123079208|sp|Q1IBP9|SYC_PSEE4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|95110209|emb|CAK14916.1| cysteinyl-tRNA synthetase [Pseudomonas entomophila L48]
Length = 460
Score = 411 bits (1055), Expect = e-112, Method: Composition-based stats.
Identities = 175/479 (36%), Positives = 253/479 (52%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D +N+RMYVCG TVYD+ H+G+ R M+ FD++ R LR
Sbjct: 1 MLTIYNTLSKTKETFKPLDGNNVRMYVCGMTVYDYCHLGHGRSMVAFDLITRWLRKSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII RA + ++ +T++ +D RL+ L P +P
Sbjct: 60 -ALTYVRNITDIDDKIINRANENG------ESFDALTARMIDAMHEDERRLSILKPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRKKIEDLRIGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKQDPLDFVLWKGAKPGEPFWDSPWGPGRPGWHIECSVMSTCCLGESFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++L+ +
Sbjct: 233 PHHENEIAQSEAATG-KPYANAWMHCGMIRINGEKMSKSLNNFFTIRDVLD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
V+R ++ +HYR I+++ L +++ L ++ A
Sbjct: 285 HPEVVRYLLVASHYRSAINYSEDSLRDSKGALERFYHALRGLPRVAAKGGEAFVERFTVA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L L RE + + L +LG+
Sbjct: 345 MNDDFGTPEACAVLFDLVREINRLRESDVEAAAGLAGRLRELGDVLGVLQLDADEFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR Q+ + G +LED K T W+
Sbjct: 405 AEGKVDAAQVEALIQARLQARADKNWAESDRIRDQITAMGVVLEDGK------GGTTWR 457
>gi|242240078|ref|YP_002988259.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
gi|242132135|gb|ACS86437.1| cysteinyl-tRNA synthetase [Dickeya dadantii Ech703]
Length = 461
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 177/483 (36%), Positives = 255/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVAFDMVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I+ +T + + D L L+P +P
Sbjct: 61 --VKYVRNITDIDDKIIKRAAENG------ETIAQLTDRMIAEMHADFASLNILSPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I HAY N +++F + P YG SR+ +++ K G RV
Sbjct: 113 RATHHIAEIIELVEKLIARRHAYVAENGDVMFSVDTAPGYGVLSRQDLEQLKAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKLNEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSTCAHGGE-YVNYWMHTGMVMVDREKMSKSLNNFFTVRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDESASPAGGEAFEARFCT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLN--- 402
A+ +D NT A L +AR+ + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIARDINRLKAEDAAAANALAAELRRLAGVLGLLEQDPELFLQS 404
Query: 403 -----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ I+ L+++R + K +++AD R +L G +LED G + T W
Sbjct: 405 GAQPCDDEVQEIDALIKQRNDARQSKDWAAADAARNRLTDMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|107101226|ref|ZP_01365144.1| hypothetical protein PaerPA_01002258 [Pseudomonas aeruginosa PACS2]
Length = 460
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANENG------EPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQILIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + + L A +LG+ +
Sbjct: 345 MDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR +L + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDRLTAMGVVLEDGK------GGTTWR 457
>gi|148254912|ref|YP_001239497.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
gi|166200130|sp|A5EHE7|SYC_BRASB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146407085|gb|ABQ35591.1| cysteinyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
Length = 472
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 212/477 (44%), Positives = 292/477 (61%), Gaps = 29/477 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T R+ F + +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTATREKRPFVPLHRNNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITD+DDKI RA ++ P +P+N+AI +T +QF +D L CL PT +
Sbjct: 61 AEHVTYVRNITDVDDKINARAARDFPGLPLNEAIRNVTELTERQFHEDVDALGCLRPTIE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSF-------SRRKIDEQKM 175
PRAT HI +M +I+ ++ G AY A + ++F +++ + R +DE
Sbjct: 121 PRATEHIAEMRDIIERLVAGGFAYVAEDHVLFSPAAMNAANKVLPRYGALANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMSSHYLGKVFD 232
G RV +KK+ DF+LWK S P EP W SP G GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKKDATDFVLWKPSKPGEPSWPSPAGIAAEGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA + AN+W+HNGFL +EG KMSKS GNF+TI E+L
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTARMANVWMHNGFLQVEGEKMSKSLGNFVTIREVL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPA 350
WP V+RL ML THYR PID+T++ L E+ + W +T +G A
Sbjct: 301 AD-------WPGEVVRLNMLKTHYRSPIDWTLRGLEESAKAVDDWYRTAGDLREGRPADA 353
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHILGIEVC--------KEHL 401
V+ AL +D+NT + LH L E+ D + F S +LG K+
Sbjct: 354 VIEALRDDINTPLMVAVLHGLRNEAASGGVDDVARFVGSLRLLGFLAEDAAQWRARKQQA 413
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+ ER K F +D +R +L + G +L+D K +G+ +T W+
Sbjct: 414 SGVDAAKVEGLIAERTAARARKDFKESDRLRDELAAMGVVLKDGK-GADGKPVTTWE 469
>gi|238785350|ref|ZP_04629338.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
gi|238713741|gb|EEQ05765.1| Cysteinyl-tRNA synthetase [Yersinia bercovieri ATCC 43970]
Length = 461
Score = 410 bits (1054), Expect = e-112, Method: Composition-based stats.
Identities = 183/483 (37%), Positives = 259/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + + +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIENS------ETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L++ +I HAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIELVERLIARDHAYVASNGDVMFAVDSDPDYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGAGRPGWHIECSAMNSKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDANAAPAGGAEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L AH+LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDIAREVNRLKTEDIAAANGLAAELRKLAHVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L+++R K ++ AD R QL G +LED G + T W
Sbjct: 405 GAQTDGDEVAKIEALIKQRNDARSSKDWALADSARDQLNELGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|238022971|ref|ZP_04603397.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
gi|237865779|gb|EEP66917.1| hypothetical protein GCWU000324_02893 [Kingella oralis ATCC 51147]
Length = 474
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 183/495 (36%), Positives = 266/495 (53%), Gaps = 57/495 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +YNTL R+ F ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +
Sbjct: 1 MPNLTVYNTLTRQKEPFIPLNPQNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+TYVRNITDIDDKII RA + + I +T++ +D+ L P
Sbjct: 61 Y--PLTYVRNITDIDDKIIARANENG------ETIQQLTARFIAAMNEDSDALGVQRPDV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI QMI +I+ +I +G AY AN ++ + P YG S + +D+ + G RV
Sbjct: 113 EPKATEHIAQMIAMIEQLIANGKAYSAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP W+SPWG GRPGWHIECSAM G FDIHGGG DL
Sbjct: 173 VDGFKRDPLDFVLWKAAKPEEPHWQSPWGNGRPGWHIECSAMGGELFGDTFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADR--------------IEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
FPHHENEIAQSC A I+ W+HNGF+ ++ KMSKS GNF
Sbjct: 233 QFPHHENEIAQSCGAHHGISGEHAPRAAHKTIDSHVKYWLHNGFIRVDNEKMSKSLGNFF 292
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
TI ++L + + A V+R +L HYR P++++ L +A+ L+
Sbjct: 293 TIRDVL-------KKYDAEVVRFFILRAHYRSPLNYSDAHLDDAKHSLTSLYNALGNVAP 345
Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILG 393
S +A+ +D +TV A+ L +LA+E K + +L A A +LG
Sbjct: 346 APFTLSEHANDYTRRFYAAMDDDFDTVKAVAVLFELAKEVNKTQSAELSGCLKALAGVLG 405
Query: 394 IEVCKEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + H N + AIE L+ +R + K ++ +D IR +L ++G +L D
Sbjct: 406 LLQREPHEFLQSGAPDNGLSADAIEALIAQRNLARANKNWAESDRIRDELAAQGVVLRD- 464
Query: 446 KNPDNGQRMTRWKQK 460
T W ++
Sbjct: 465 -----AGGETTWTRE 474
>gi|13476470|ref|NP_108040.1| cysteinyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
gi|21264021|sp|Q984X8|SYC_RHILO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|14027231|dbj|BAB54185.1| cysteine-tRNA ligase [Mesorhizobium loti MAFF303099]
Length = 477
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 257/475 (54%), Positives = 332/475 (69%), Gaps = 19/475 (4%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YNTL R T+F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5 SQGLRLYNTLTRAKTDFVPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLA 115
G+ VTYVRNITD+DDKI RA ++ S + +N+AI +T K QF +D L
Sbjct: 65 GQAHVTYVRNITDVDDKINARALRDFGSEISAGKLSLNEAIRRVTEKTADQFHRDVATLG 124
Query: 116 CLAPTHQPRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
CL PT +PRAT + MI LIQ++I GHAY A E++FDT+S+P+YG S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKADMITLIQSLIKRGHAYAAAGEVLFDTASMPDYGQLSKR 184
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+DEQ+ G RV HKKNP DF+LWK S+P EPGW+SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARVAVDAHKKNPGDFVLWKLSSPEEPGWQSPWGRGRPGWHIECSAMSAAYLG 244
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+VFDIHGGGLDLIFPHHENEIAQS CA AN+W+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTSVMANVWMHNGFLQVEGQKMSKSLGNFYSI 304
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKG 345
+ELLET+ FGGRSWP V+RLAMLMTHYREPIDF+V++L EAE L KW + + + G
Sbjct: 305 HELLETETFGGRSWPGEVLRLAMLMTHYREPIDFSVRKLEEAENTLRKWKRAADLAPAAG 364
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
+ V+ AL +DL T +A Q L +LA E+ ++ AS LG +V ++++
Sbjct: 365 QLPVEVIDALSDDLATYAAFQVLTQLAGEAADGNEAAAALKASLLFLGFDVASADIDEDG 424
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ K + RL L+ K ++ AD IR +L ++G L+D K+P G+R+T W+ K
Sbjct: 425 ---VAKAIANRLALIAAKNWTEADRIRDELLAQGVQLKDGKDPVTGERITTWEVK 476
>gi|212223750|ref|YP_002306986.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|229558797|sp|B6YUQ3|SYC_THEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|212008707|gb|ACJ16089.1| cysteinyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 476
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 182/495 (36%), Positives = 251/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL ++ EF+ + +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MAIRVYNTLTKQKEEFRPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII RA + + + K + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIRRANETG------EDPKELAEKFLRYFLEDMKALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I ++ + G+AYE N+ + F+ +YG S K++E G RV
Sbjct: 113 PRVTEHIQDIIDFVRKLQEKGYAYEGNDGVYFEVRKFKDYGKLSGIKLEELVKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E W+H GF+ + G KMSKS GNF+TI ELL + +
Sbjct: 233 PHHENEIAQSEACTGHE-WVRYWLHTGFVMVSGEKMSKSLGNFVTIRELL-------QKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STSKGII 347
VIR +L HYR P+D+T + + A+ L + T +
Sbjct: 285 SPEVIRFFVLQKHYRSPLDYTEEGIQHAKNNLERLYNTLENIRVAMEKADVAFRWDEEEF 344
Query: 348 D---------PAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ + L F
Sbjct: 345 ELYETVREARKKFYDAMDDDFNTAEALKAVFEVSNAVNRYLTKVEKPKESVLRKALEFFK 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ + G+ + KE + IE LV R L K + F+ AD IR +L++ G LED
Sbjct: 405 IVSEVFGLFEDYFKEQKAGDEEALIELLVSVRAELRKQRNFTLADKIRDELKALGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 T------PQGTIWKR 473
>gi|20808681|ref|NP_623852.1| cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|22257048|sp|Q8R7T3|SYC_THETN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|20517317|gb|AAM25456.1| Cysteinyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 467
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 189/488 (38%), Positives = 254/488 (52%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNT+ R EF+ + + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MRLYNTMTRTKEEFKPLKDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII RA++E N I + +++ KD L T PR
Sbjct: 59 TVNYVQNFTDIDDKIINRAKEE------NTTEKEIAERFIEEYFKDADALGIKRATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AY + + F+T+ +YG S + IDE G RV
Sbjct: 113 ATEHIDDIIEFIKILIDKGYAYVVDGNVYFETAKFKDYGKLSHKNIDELMAGARVEIDEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK P EP W+SPWG+GRPGWHIECS MS+ YLGK DIH GG DLIFPH
Sbjct: 173 KKNPLDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G+LN+ KMSKS GNF T+ EL E +
Sbjct: 233 HENEIAQSEAAYD-QPFSKYWMHIGYLNVNNEKMSKSKGNFFTVRELTE-------KYDP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
V+RL MLM HYR PI+F++ L +A+ + +
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLLDQAKSAYERLSNAVVNLKHLANITKDRELSDEEKDLI 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI L ++A+ + N +L +F + +
Sbjct: 345 VKFDEYKKQFEEAMDDDFNTADAISVLFEMAKTANANLSGNSSKKLVEYILEMFLKLSDV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ K + I +L++ER K K + AD IR +L+ +G ILED
Sbjct: 405 LGLSY-KNAETEIEDEEILRLIEERQKARKEKNWKLADEIRDKLKERGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|226309785|ref|YP_002769679.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|254765181|sp|C0ZIF7|SYC_BREBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226092733|dbj|BAH41175.1| cysteinyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 468
Score = 410 bits (1053), Expect = e-112, Method: Composition-based stats.
Identities = 173/492 (35%), Positives = 259/492 (52%), Gaps = 58/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++ NT+ R+ F ++P ++MYVCGPTVY++ HIGNARP IVFD L R L+Y
Sbjct: 1 MGIQLTNTMTRRKEPFHTLEPGKVKMYVCGPTVYNYIHIGNARPAIVFDTLRRYLKYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+NITD+DDK+I A QE ++ + + T + D L P Q
Sbjct: 61 E--VTFVQNITDVDDKLIRVANQEGVTV------KEVADRYTDAYNADLKSLNVSPPDIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR IP++I +Q +I G AYE+ ++ F T YG S + +D+ + G RV
Sbjct: 113 PRVMQTIPEIIEFVQGLIEKGFAYESEGDVYFRTGRFQEYGKLSHQPLDDLQAGARVEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W+SPWG GRPGWHIECSAM+ +LG+ DIH GG DL+F
Sbjct: 173 EKKEHPLDFVLWKAAKTGEVTWDSPWGEGRPGWHIECSAMALKFLGEEIDIHAGGTDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + A W+HNG LN++ KMSKS GNF+ +L +
Sbjct: 233 PHHENEIAQSECFTG-KVFARYWLHNGMLNIDNEKMSKSLGNFLLARDL-------SEKF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
+IR ML HYR PI+F+ + + +A L + T+
Sbjct: 285 GGQLIRFFMLQGHYRNPINFSEELIEQAANGLDRITTAYTNLSHRLDTARAEEPNDQAQE 344
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
G + ++ + +D+NT +AI + + +E+ + +
Sbjct: 345 QARIIGELRERFIAEMDDDINTANAITVIFDVVKEANLYLRHQNVGETEVRAYMDLLVEL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+++ +E + + I+ L++ER K + F+ +D IR L +KG +LED
Sbjct: 405 TEVLGLDIAEEQ--ELLDSEIDALIEERTEARKARNFARSDEIRDLLAAKGIVLEDT--- 459
Query: 449 DNGQRMTRWKQK 460
+ RW++K
Sbjct: 460 ---PQGVRWRRK 468
>gi|144897394|emb|CAM74258.1| Cysteinyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
Length = 459
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 225/480 (46%), Positives = 280/480 (58%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ FQ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL Y
Sbjct: 1 MALVLYNTLTRRKEAFQPLSPDHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLSRLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI +R++ + I++IT++ TQ F D L L PT +
Sbjct: 60 -PSVTYVRNITDVDDKINQRSKDSG------EPIAVITARTTQMFHDDIAELNALPPTIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI +IQ +I GHAY A ++F+ S+ +YG SRR +DE G RV
Sbjct: 113 PRATAHIQQMIDMIQVLIAKGHAYAAEGHVLFEVGSMADYGQLSRRSMDEMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKN DF+LWK STP PGW+SPWGRGRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 PYKKNAGDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSGQYLGQTFDIHGGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ A W+HNG+L +EG KMSKS GNF T+ ELLE
Sbjct: 233 PHHENEIAQSQCANGA-PFARYWLHNGYLMVEGEKMSKSLGNFFTVRELLEAA------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLSAL 355
P IRL ML THY +P D+T + L +A L + + AV +AL
Sbjct: 285 PGEAIRLCMLSTHYHQPFDWTAEGLKQARATLDRLYNALRGTADAGTEAVDLPLAVQAAL 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEVCKEHL-------- 401
+DLNT AI LH+LA K A+ LG+ + +
Sbjct: 345 EDDLNTPLAISHLHELAGALNKAESAADKARARGALLAAGQALGVLLQDPEVWFRWQSAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+Q RL K K F+ AD IRK+L G +LED G + T WK+
Sbjct: 405 ADSGPDEAGIESLIQARLEARKAKNFAEADRIRKELADSGVVLED------GPQGTTWKR 458
>gi|116049743|ref|YP_791450.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
gi|296389817|ref|ZP_06879292.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa PAb1]
gi|122258854|sp|Q02KT6|SYC_PSEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|115584964|gb|ABJ10979.1| cysteinyl-tRNA synthetase [Pseudomonas aeruginosa UCBPP-PA14]
Length = 460
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 181/479 (37%), Positives = 256/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + F + + +RMYVCG TVYD+ H+G+ R M+ FDV+ R LR+ +
Sbjct: 1 MLQIYNTLSKTKEVFTPLVGNQVRMYVCGMTVYDYCHLGHGRSMVAFDVITRWLRHRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + ++ ++T + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRANEN------DEPFDVLTERMIAAMHEDEARLNILKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI M +IQ +I G+AY N ++ + YG SRR++++ ++G R+
Sbjct: 113 RATDHIAGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFAGYGKLSRRRVEDLRIGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECS MS+ LG FDIHGGG DL F
Sbjct: 173 EAKEDPLDFVLWKGAKPGEPSWSSPWGEGRPGWHIECSVMSTCCLGDSFDIHGGGNDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H G + + G KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAATG-KPYAKSWLHCGMITINGEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R ++ +HYR PI+++ + L EA+ L ++ +A
Sbjct: 285 HPEVVRYLLIASHYRSPINYSEENLREAKAALDRFYNALKGLPEAAPAEAAEYVERFAAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A L +LARE + + L A +LG+ +
Sbjct: 345 MDDDFNTAGACSVLFELAREVNRLRESDLSAAAALAARLKQLAGLLGVLQLEPEAFLQAG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+Q RL K ++ +D IR QL + G +LED K T W+
Sbjct: 405 AEGKVDAAEVEALIQARLEARAAKNWAESDRIRDQLTAMGVVLEDGK------GGTTWR 457
>gi|294101993|ref|YP_003553851.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616973|gb|ADE57127.1| cysteinyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 472
Score = 409 bits (1052), Expect = e-112, Method: Composition-based stats.
Identities = 170/492 (34%), Positives = 246/492 (50%), Gaps = 56/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN L RK F + + Y CGPTVYDF HIGNARP IVFDV R L
Sbjct: 1 MSLMLYNDLTRKKEPFIPLKEGEVGFYSCGPTVYDFFHIGNARPFIVFDVFRRYLEDIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+N TDIDDK+I RA +E ++ + +++ +D L
Sbjct: 61 --KVVFVQNFTDIDDKMINRANEEGITV------KELADAFIKEYFEDADALGVRRADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+H+ +++ ++Q +I GHAY + ++ F S P YG S++ I++ + G+R+
Sbjct: 113 PRATDHMKEIVEVVQTLIDKGHAYVVDGDVFFSVESFPGYGKLSKQSIEDLQSGSRIDVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP WESPWG GRPGWHIECS MS+ YLG FDIH GG DLIF
Sbjct: 173 EQKRHPLDFALWKAQKPGEPAWESPWGLGRPGWHIECSVMSTKYLGNTFDIHSGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+ A ++ W+HNG+L ++ KMSKS GNF+T+ + + +
Sbjct: 233 PHHENEVAQAEAATGMQ-FVRFWLHNGYLLIDKEKMSKSLGNFLTV-------RNARKKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
IR ML HYR PI+F+ + L +A + + T
Sbjct: 285 SPLAIRYFMLSAHYRSPINFSEEGLNQATGAVERLRNCWTDLEYALQSREQKEKDDTEAF 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
+ + +D NT A+ ++ ++ R F
Sbjct: 345 LSEIKQAETKFYEEMNDDFNTAGALGSVFEVVRLINTYLKDNSSIDFKVCKAAQTFFTKI 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
I+GI + + + IE +++ER K + F+ +D IR QL KG ILED
Sbjct: 405 DGIMGIMGLESEKEELDTSEIESMIEERTAARKARDFAKSDAIRDQLAEKGIILEDT--- 461
Query: 449 DNGQRMTRWKQK 460
T+WK++
Sbjct: 462 ---PEGTKWKKQ 470
>gi|78221284|ref|YP_383031.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|109894903|sp|Q39ZL8|SYC_GEOMG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78192539|gb|ABB30306.1| cysteinyl-tRNA synthetase [Geobacter metallireducens GS-15]
Length = 485
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 198/507 (39%), Positives = 258/507 (50%), Gaps = 71/507 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL EF + P + MYVCG TVYD HIG+AR +VFD++YR LR+
Sbjct: 1 MSLRVYNTLSGTKEEFTPLVPGRVSMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TD+DDKII RA QE + I+ + +F +D L PTHQ
Sbjct: 61 D--VTYVRNYTDVDDKIINRANQEGV------PYNAISERFIAEFDRDMAALGLDLPTHQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +MI +I +I G AY A+ ++ F Y S+R +DE + G R+
Sbjct: 113 PKATEHIAEMIDVISRLIEKGFAYAADGDVYFCVEKFDPYLKLSKRNLDEMQAGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP WESPWG+GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRHPMDFALWKGSKPGEPFWESPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + A+ WIHNGF+N+ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAANG-KPFAHYWIHNGFVNINSEKMSKSLGNFFTIKEVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A V+R +L HYR PIDF+ Q L EAE L + T
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLREAEAGLERIYGTLAGIDENLTKGAEGTAEETDRE 344
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTK--------------NHDLLPIF 385
A+ +D NT A+ + L R + + +
Sbjct: 345 LAEKAVTFPERFREAMDDDFNTAQALGFVFDLVRSANRVLGEGKGGGSNRALLAEARDRI 404
Query: 386 NASAHILGI---------EVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRK 433
+LGI E K + IE+L+ ER+ + F AD IR
Sbjct: 405 RKVGAVLGIFTSEPRAFAERLKNRKAAELPITAEEIERLIAERIAARANRDFKRADEIRD 464
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
L +KG +L D + T WK K
Sbjct: 465 SLAAKGIMLLDS------PQGTTWKVK 485
>gi|268591223|ref|ZP_06125444.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
gi|291313193|gb|EFE53646.1| cysteine--tRNA ligase [Providencia rettgeri DSM 1131]
Length = 462
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 183/484 (37%), Positives = 259/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRN+TDIDDKII+RA + N+++ +T++ + KD L L P +P
Sbjct: 61 L--NYVRNVTDIDDKIIKRAAEN------NESVEALTTRMLAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L Q++I GHAY AN +++F+ + PNYG SR+ +++ + G RV
Sbjct: 113 RATRHIGEIIELTQSLIERGHAYVAANGDVMFEVKTDPNYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
A +R +L HYR +++T + L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARSALERMYTALRGTDKSAVPAGGDEFKARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L + RE + + + A +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMVREVNRLKSEDMSAANGMAAQLRELASVLGLLEQDPEVFLKG 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ IE L+Q+RL K K ++ AD R +L + G +LED + T
Sbjct: 405 GAQTEDDAEVAKIEALIQQRLDARKNKDWAQADAARDELTAMGIVLEDS------AQGTI 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|322833979|ref|YP_004214006.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
gi|321169180|gb|ADW74879.1| cysteinyl-tRNA synthetase [Rahnella sp. Y9602]
Length = 463
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 176/485 (36%), Positives = 250/485 (51%), Gaps = 50/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITDIDDKII+RA + + +T + + D L L P +P
Sbjct: 61 L--KYVRNITDIDDKIIKRAAENG------ETFMALTDRMIAEMHADFASLNILPPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I ++Q +I HAY +N +++F S P+YG SR+ +D+ + G RV +
Sbjct: 113 RATQHIHEIIDIVQKLIDRDHAYVASNGDVMFWVESDPDYGLLSRQDLDQLQAGARVEVE 172
Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+
Sbjct: 173 ANVKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 FPHHENEIAQSSCAHD-GPYVNTWMHSGMVMIDREKMSKSLDNFFTVRDVL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR ++++ + L A + +
Sbjct: 285 YDAESVRYFLMSGHYRSQLNYSEENLKLARTSMERLYTALRGTDAAATPAGGEAFVTRFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH---- 400
+A+ +D NT A L +AR+ + + L A +LG+
Sbjct: 345 AAMDDDFNTPEAYSVLFDMARDINRLKTEDLSAANGLAAELRQLAGVLGLLEQDPEQFLK 404
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
N + IE L+++R K + AD R +L G +LED G T
Sbjct: 405 SGAQADNDDEVAEIEALIKQRNDARASKDWGMADKARDRLNEMGIVLED------GAAGT 458
Query: 456 RWKQK 460
W++K
Sbjct: 459 TWRRK 463
>gi|238754302|ref|ZP_04615659.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
gi|238707549|gb|EEP99909.1| Cysteinyl-tRNA synthetase [Yersinia ruckeri ATCC 29473]
Length = 463
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 180/485 (37%), Positives = 256/485 (52%), Gaps = 50/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +TS+ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAAEN------NETCDQLTSRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+HI ++I L+Q +I HAY AN +++F S P+YG SR+ +++ + G RV
Sbjct: 113 HATHHISEIIQLVQRLIERDHAYVAANGDVMFAVDSDPDYGLLSRQDLEQLQAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGMDTNAVAAGGEEFEARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L AH+LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGLAAELRKLAHVLGLLAQDPEQFLQS 404
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
++ N IE L+++R K ++ AD R +L G +LED + T
Sbjct: 405 SAQTDVDNNEVSEIEALIKQRNDARSSKDWALADSARDRLNEMGIVLEDS------PQGT 458
Query: 456 RWKQK 460
W++K
Sbjct: 459 IWRRK 463
>gi|170727456|ref|YP_001761482.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
gi|229558789|sp|B1KLU0|SYC_SHEWM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169812803|gb|ACA87387.1| cysteinyl-tRNA synthetase [Shewanella woodyi ATCC 51908]
Length = 459
Score = 409 bits (1051), Expect = e-112, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ EF+ + P + MYVCG T+YD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVAFDMIVRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RNITD+DDKII+RA + ++ +T + + KD L P +P
Sbjct: 61 --VNFLRNITDVDDKIIKRAAENK------ESCDSLTERLIGEMHKDFDSLNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+ ++I +++ +I HAY +N +++F SS P YG S + +++ + G RV +
Sbjct: 113 RATLHMAEIIEMVEKLIEKEHAYVSSNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL F
Sbjct: 173 DSKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLS 353
A IR +L HYR ++++ L +A+ L++ +
Sbjct: 285 DAATIRYFLLSGHYRSQLNYSEDNLKQAKSALARLYTALKDLDLTVEPAAAENFVSKFKQ 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + RE + L A +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREVNRLKVTDLAQASALAVRLKELAGVLGILEQDVDSFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N +E L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 ESNDAEVAEVEALIAERNRARAEKDWPAADIARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|157374677|ref|YP_001473277.1| cysteinyl-tRNA synthetase [Shewanella sediminis HAW-EB3]
gi|187631638|sp|A8FTH6|SYC_SHESH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157317051|gb|ABV36149.1| Cysteine--tRNA ligase [Shewanella sediminis HAW-EB3]
Length = 459
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ EF+ + P + MYVCG T+YD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKLYNSLTRQKEEFKPLQPGKVGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RNITD+DDKII+RA + ++ +T + + +D L P +P
Sbjct: 61 --VNFLRNITDVDDKIIKRANENK------ESCESLTERLIGEMHRDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I HAY + N +++F SS P YG S + +D+ + G RV +
Sbjct: 113 RATLHIPEIIDMVEKLIEKEHAYVSGNGDVLFSVSSFPEYGRLSGQNLDQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL F
Sbjct: 173 DTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSCCAHNT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLE-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A+ L + + S
Sbjct: 285 DAATVRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVEAASADEYVAKFKV 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L ++ RE K L A +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFEMVREINRLKEADNAKASSLGVKLKELADVLGILDQDVDTFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGSTDEVAEIEALIAERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|52078589|ref|YP_077380.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|52783950|ref|YP_089779.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|61216165|sp|Q65PC8|SYC_BACLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|52001800|gb|AAU21742.1| cysteinyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|52346452|gb|AAU39086.1| CysS [Bacillus licheniformis ATCC 14580]
Length = 467
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 169/489 (34%), Positives = 255/489 (52%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL RK F ++ ++MYVCGPTVY++ HIGNARP IVFD + + L Y
Sbjct: 1 MTLTLYNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV N TD+DDK+I+ A + +P+ I + + + +D L C
Sbjct: 61 E--VQYVSNFTDVDDKLIKAANELGEEVPV------IAERFIKAYFEDVGSLGCTKADCH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I IQ +I G+AYEA+ ++ + T S YG S + +DE + G R+
Sbjct: 113 PRVTENMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKEDALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
V+R ML HYR PI+++V+ L + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWL 344
Query: 345 GIIDPAVLSA---LYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAH 390
I+ + + +D NT +AI L LA+ + +F+
Sbjct: 345 EKIEEQRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++ L + IE+L+++R + + F+++D IR QL+S ILED
Sbjct: 405 VLGFSLKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -PQGTRWKR 464
>gi|212711245|ref|ZP_03319373.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
gi|212685974|gb|EEB45502.1| hypothetical protein PROVALCAL_02317 [Providencia alcalifaciens DSM
30120]
Length = 462
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 181/484 (37%), Positives = 255/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLQIFNTLSRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN+TDIDDKII+RA + N+++ +T++ + KD L L P +P
Sbjct: 61 --VNYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L +++I GHAY N +++F+ + P+YG SR+ +D+ + G RV
Sbjct: 113 RATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPSYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLE-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR +++T + L +A L +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSATPAGGEIYKSRFCE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A AL +ARE + + + A +LG+
Sbjct: 345 AMNDDFNTPEAYSALFDMARELNRLKTENMDAANGMAAQLRELAKVLGLLEQDPETFLQG 404
Query: 401 -LNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
IE L+++R + K ++ AD R L + G +LED T
Sbjct: 405 GAQSEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGIVLEDS------SAGTT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|27378901|ref|NP_770430.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
gi|61216344|sp|Q89NP8|SYC_BRAJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|27352051|dbj|BAC49055.1| cysteinyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
Length = 460
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 216/470 (45%), Positives = 291/470 (61%), Gaps = 33/470 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL ++ F +D +N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLTKEKRTFVPLDANNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI +RA ++ P +P+N+AI +T + +QF D L L P+ +
Sbjct: 61 EAHVKYVRNITDVDDKINDRAARDFPGLPLNEAIREVTEQTGKQFHADVDALGALRPSVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-------SSIPNYGSFSRRKIDEQKM 175
PRAT HI +M +I+ ++ G AY A + ++F S++P YG+ S R +DE
Sbjct: 121 PRATEHIGEMREIIERLVAGGFAYVAEDHVLFSPQAMNAANSTLPRYGALSNRSLDEMVA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFD 232
G RV +KK DF+LWK S P EP W SP G +GRPGWHIECSAM+ +LG+ FD
Sbjct: 181 GARVDVAPYKKGSTDFVLWKPSKPGEPSWPSPAGIAAQGRPGWHIECSAMAWKHLGEYFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQ+CCA E+ AN W+HNGFL +E KMSKS GNFITI+ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQTCCAFHRERMANYWMHNGFLQVESEKMSKSLGNFITIHELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--A 350
WP V+RL ML THYR PID+T++ L E+ L W + + P +
Sbjct: 301 AD-------WPGEVLRLNMLKTHYRSPIDWTMKSLEESAKTLDDWYRVAADVDPGRPAAS 353
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHLN 402
V+ L +DLNT AI ALH L +N D+ S +LG E K+ +
Sbjct: 354 VVEPLLDDLNTSLAIAALHGL-----RNSDV-SALAGSLRLLGFLSESAAQWEDRKQKAS 407
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +E+L+ ER K F +D IR QL + G ++D K +
Sbjct: 408 GVDAGEVERLISERTAARGRKDFKESDRIRDQLAAMGVAIKDSKEGTTWE 457
>gi|158521678|ref|YP_001529548.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158510504|gb|ABW67471.1| cysteinyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 479
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 193/498 (38%), Positives = 255/498 (51%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN L K F ++P + MYVCGPTVY HIG+AR ++VFDV+ R LR
Sbjct: 1 MTLSIYNVLTGKKELFVPVNPGKVGMYVCGPTVYGPCHIGHARSVVVFDVIARYLRVAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TD+DDKII RA +E + I K +F +D L T +
Sbjct: 61 D--VTYVRNFTDVDDKIIHRAAEEGKTSE------QIAEKYIAEFYRDMDALFVQRATVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++ +IQ ++ G AYEA ++ F + P YG S RK+D+ + G R+
Sbjct: 113 PKATEHIDDILAVIQILVNKGVAYEAGGDVFFSVEAFPGYGKLSGRKLDQMEAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK P EP WESPWGRGRPGWHIEC+AMSS YLG+ FDIHGGG DLIF
Sbjct: 173 KRKRNPFDFVLWKAEKPGEPSWESPWGRGRPGWHIECTAMSSRYLGQTFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A E A W+HNGF+ + KMSKS NF INE+LE +
Sbjct: 233 PHHENEIAQSEAAFGRE-FARFWVHNGFVQINQEKMSKSLNNFKMINEILEA-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------STSK 344
+RL +L +HYR PIDF+ + EA L K
Sbjct: 285 HPETVRLFLLSSHYRSPIDFSDTSMAEAGAGLDKLYTALGRVEALTPSGEKPSPASDGDA 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNASAHIL 392
G + A+ +D NT A+ AL + AR + D + S +L
Sbjct: 345 GEYWNSFCQAMDDDFNTARAVAALFETARHINRLLDQAGDLLTADVSAHYDVMRKSGDVL 404
Query: 393 GI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
G+ + + I+++V +R+ K K F+ AD +RKQL
Sbjct: 405 GLFNTPAQVYFEGRKQAAAKKDAVDPAEIDRMVAQRVAARKAKDFAKADQLRKQLTDLNV 464
Query: 441 ILEDYKNPDNGQRMTRWK 458
+LED + T WK
Sbjct: 465 VLEDSPDGT-----TTWK 477
>gi|317131764|ref|YP_004091078.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
gi|315469743|gb|ADU26347.1| cysteinyl-tRNA synthetase [Ethanoligenens harbinense YUAN-3]
Length = 465
Score = 409 bits (1050), Expect = e-112, Method: Composition-based stats.
Identities = 173/486 (35%), Positives = 257/486 (52%), Gaps = 52/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R+ EF I P R+Y CGPTVY++ H+GNARPM+VFD+L R L Y
Sbjct: 1 MTMKIYNTLTREKDEFVPIKPGEARIYACGPTVYNYIHVGNARPMVVFDILRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + +N TD+DDK+I RA +E A++ + K + +D L T
Sbjct: 61 --KVLFAQNFTDVDDKMIRRANEEGV------AVAEVAEKYIAAYREDAAGLHVREATFH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +I ++ LI+ + G+AY ++ ++ F + YG S + +++ + G RV
Sbjct: 113 PRATENIADILALIRTLEQKGYAYASDGDVYFRAHAFKEYGKLSHQPLEDLEAGARVDVS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+ H+LG+ DIH GG DLIF
Sbjct: 173 ERKEDPVDFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMARHFLGQTIDIHCGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ A+ W+HNG++N++ RKMSKS GNF T+ E+ +
Sbjct: 233 PHHENEIAQSECANDA-PFAHYWMHNGYINIDNRKMSKSLGNFFTVREV-------AAKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
IR ML YR PI+F+ + + ++ L + + +
Sbjct: 285 GYEPIRFLMLSAQYRTPINFSDEIMEQSVAALDRLYRCREALKDALRQAGETPADSAAVS 344
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGI 394
+A+ +DLNT A+ L +L +E +F +LG+
Sbjct: 345 AWQEKFDAAMDDDLNTADALAVLFELVKEINTRVAEGTAGADWLKGAAGLFGTFCDVLGL 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
++ + +E L+++R K K F +AD IR +L +KG +L+D +
Sbjct: 405 LYERKERT--LDAEVEVLIEKRRQARKAKDFKTADAIRDELSAKGIVLKDT------PQG 456
Query: 455 TRWKQK 460
+W+ K
Sbjct: 457 VKWEYK 462
>gi|148827229|ref|YP_001291982.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
gi|187629826|sp|A5UFP3|SYC_HAEIG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148718471|gb|ABQ99598.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittGG]
Length = 459
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 255/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K + AD R +L + G +LED N T W++
Sbjct: 405 GSDDDEVAKIEVLIKQRNEARAAKDWPVADAARNELTAMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|167036780|ref|YP_001664358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|167039500|ref|YP_001662485.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|256752501|ref|ZP_05493358.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300915250|ref|ZP_07132565.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307725174|ref|YP_003904925.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|320115202|ref|YP_004185361.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|229558799|sp|B0KCH9|SYC_THEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558800|sp|B0K5F6|SYC_THEPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166853740|gb|ABY92149.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|166855614|gb|ABY94022.1| cysteinyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|256748636|gb|EEU61683.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|300888974|gb|EFK84121.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307582235|gb|ADN55634.1| cysteinyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|319928293|gb|ADV78978.1| cysteinyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 466
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 256/488 (52%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EF+ ++ + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MKLYNTLSRTKEEFEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA++E N + K +++ D L T P+
Sbjct: 59 KVNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIEEYFIDADNLGIKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AY N + F+T+ +YG S + I+E + G R+
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK P EP W+SPWG+GRPGWHIECS MS+ YLGK DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G+LN+ KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSEAAYG-QPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+RL MLM HYR PI+F++ + +A+ + + +
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQAKSAYERLLNAVANLKHLLTVCKDRELNEEEKRIK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI L ++++ + N +L IF + I
Sbjct: 345 EKFEEYKKEFEDAMDDDFNTADAISVLFEMSKTANTNISGNSSKKLVEYILDIFLKLSEI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + + I L++ER K K + AD IR +L KG ILED
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|37679546|ref|NP_934155.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|37198290|dbj|BAC94126.1| cysteinyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 509
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 176/485 (36%), Positives = 254/485 (52%), Gaps = 47/485 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++ +KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 47 IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 106
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ T+VRNITDIDDKII+RA + + +T + + D L P
Sbjct: 107 GYDL--TFVRNITDIDDKIIKRAAENG------ETCDSLTERLIGEMHADFDALNMKRPD 158
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT +I ++I L++ +I G AY N +++F+ + YG S++ +D+ + G RV
Sbjct: 159 VEPRATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARV 218
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG D
Sbjct: 219 DVETAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSD 278
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 279 LQFPHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG------ 331
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPA 350
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 332 -HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSR 390
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL- 401
+A+ +D NT A L +ARE + L + A ++GI
Sbjct: 391 FTAAMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAF 450
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
N + IE L++ R K +++AD R +L G +LED + T
Sbjct: 451 LKGDAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPD------GT 504
Query: 456 RWKQK 460
W++K
Sbjct: 505 TWRRK 509
>gi|310766910|gb|ADP11860.1| Cysteinyl-tRNA synthetase [Erwinia sp. Ejp617]
Length = 462
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 186/484 (38%), Positives = 254/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R FDV+ R LRY
Sbjct: 1 MLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++I +T++ + +D L L P +P
Sbjct: 60 -HLKYVRNITDIDDKIIKRANENG------ESIERLTNRMIDEMHQDFAALNILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L++ +I HAY +N +++F S P YGS SR+ +D+ + G RV
Sbjct: 113 RATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVA 172
Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+
Sbjct: 173 ADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 285 YDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D NT A AL LARE + L +LG+
Sbjct: 345 EAMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPEQFLQ 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+N IE L+Q R+ K K ++ AD R +L G +LED G TR
Sbjct: 405 SGVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTR 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|86750485|ref|YP_486981.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
gi|109894930|sp|Q2IUP0|SYC_RHOP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|86573513|gb|ABD08070.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
Length = 493
Score = 408 bits (1049), Expect = e-112, Method: Composition-based stats.
Identities = 219/496 (44%), Positives = 294/496 (59%), Gaps = 46/496 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL ++ F IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MALRLYDTLTKEKRAFAPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRNITD+DDKI +RA +++P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 ENHVTYVRNITDVDDKINDRAARDYPGLPLNEAIRKVTEQTERQFHDDVDALGCLRPTVE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I ++ G AY A + ++F +++ P YG+ + R +DE
Sbjct: 121 PRATEHIGEMRTIIDRLVAGGFAYVAADHVLFSPAAMNAANSVLPRYGALANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP G GRPGWHIECSAMS +LG+ FD
Sbjct: 181 GARVDVAPYKRDATDFVLWKPSKPGEPSWPSPAGITMEGRPGWHIECSAMSWKHLGETFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA + ++ A W+HNGFL +EG KMSKS GNFITI ELL
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFQTDRMAQTWMHNGFLQVEGEKMSKSLGNFITIRELL 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
T+KFGG SW ++R AM+ THYR PID+TV+ L E +L W + G
Sbjct: 301 ATEKFGGDSWVGEILRFAMIKTHYRSPIDWTVKALDEGHKVLWDWYRDIGDVGPAQQLPG 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-------- 401
+ L +DLN SAI +H L ++ A+ + LG + L
Sbjct: 361 EFIDCLADDLNISSAIAFMHSLRKD-----KKFAELLATMNFLGFSNAESVLARRPVGVR 415
Query: 402 -------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
IE+ + R K F +D IR +L + G +
Sbjct: 416 INLPPAHAEAAVGTVEVLAKPLSKSEIEERIDARTAARARKDFKESDRIRDELAAMGIAI 475
Query: 443 EDYKNPDNGQRMTRWK 458
+D K+ D +T W+
Sbjct: 476 KDGKDADGKP-VTTWE 490
>gi|300721928|ref|YP_003711208.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
gi|297628425|emb|CBJ88990.1| cysteine tRNA synthetase [Xenorhabdus nematophila ATCC 19061]
Length = 460
Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats.
Identities = 180/482 (37%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDAIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRN+TD+DDKII+RA + N++ +T++ + D L L P +P
Sbjct: 61 L--TYVRNVTDVDDKIIKRAIEN------NESCDDLTTRMLAEMHNDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY AN +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIEITETLIERGHAYVAANGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKQGEPSWESPWGTGRPGWHIECSAMNGKTLGHHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVLG-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR +++T + L +A L + + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTSLRGTDKSAQPAGGAGFEARFTE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L A ILG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKAEDIVAANGLAAELRKLAGILGLLEQEPEHFLQG 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE L+++R K K+++ AD R QL G LED G + T W+
Sbjct: 405 GAQVDDDVAQIEALIKQRNDARKNKEWALADAARNQLNELGIELED------GPQGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|288574958|ref|ZP_06393315.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570699|gb|EFC92256.1| cysteinyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 469
Score = 408 bits (1048), Expect = e-111, Method: Composition-based stats.
Identities = 180/490 (36%), Positives = 250/490 (51%), Gaps = 54/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN L RK F + + Y CGPTVYD+ HIGNARP IVFDVL R + +
Sbjct: 1 MSLVLYNDLTRKKEPFVPLKDGEVGFYSCGPTVYDYFHIGNARPFIVFDVLRRYMEFSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TD+DDK+I RA + + + + K + +D L TH
Sbjct: 61 --RVTFVQNFTDVDDKMINRANE------MGITVQELAEKTIADYFEDADALGIKRATHY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI ++I L++ + GHAYE + + FD SS P YG SR+ I+E + G+R+
Sbjct: 113 PRATEHIEEIIDLVKRLEESGHAYEVDGVVYFDVSSFPEYGKLSRQNIEELQSGSRIEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK P EP W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 SSKRNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSAMAMKYLGNTLDIHSGGTDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A E W+HN ++ ++ KMSKS GNF+T E + +
Sbjct: 233 PHHENEIAQAEAAT-EEVFVRYWLHNEYILIDKEKMSKSLGNFMTARE-------ARKHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
IR+ ML HYR P++F + L +A L + +
Sbjct: 285 SPLAIRMFMLSAHYRSPVNFGPEGLQQATAALERLHNCWSDFRYAADNRPHSQGQDDIVE 344
Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLP---------IFNASAH 390
++A+ +D NT AI + + K +D L F
Sbjct: 345 SIKRHRDDFVAAMDDDFNTAGAIGHIFEAVSTVNGHLKGNDSLSSEGIKAIEDFFRDVDS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
I+G+ + S IE L+++R K F+++D IR QL +KG ILED
Sbjct: 405 IMGLIGLDSDGQDDDSEEIESLIRKREEARSAKDFATSDAIRDQLAAKGVILEDT----- 459
Query: 451 GQRMTRWKQK 460
+ T+WK+K
Sbjct: 460 -PQGTKWKKK 468
>gi|46143889|ref|ZP_00133878.2| COG0215: Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae
serovar 1 str. 4074]
gi|126208389|ref|YP_001053614.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae L20]
gi|187629818|sp|A3N0S3|SYC_ACTP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126097181|gb|ABN74009.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
5b str. L20]
Length = 459
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|119945844|ref|YP_943524.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
gi|119864448|gb|ABM03925.1| cysteinyl-tRNA synthetase [Psychromonas ingrahamii 37]
Length = 461
Score = 407 bits (1047), Expect = e-111, Method: Composition-based stats.
Identities = 176/483 (36%), Positives = 267/483 (55%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ F+ + P + MYVCG T+YD+ HIG+ R + FD + R LR+
Sbjct: 1 MLKIYNSLTRQKEPFKPLIPGKVGMYVCGITIYDYCHIGHGRTFVAFDTVARYLRFSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ Y+RNITD+DDKII+RA + N++ +TS+ T+ +D L L P +P
Sbjct: 60 -SLNYIRNITDVDDKIIKRAAEN------NESCDQLTSRFTEAMHQDFDALFMLRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T+H+P++I +I+ +I GHAY NN+++F S YG S + ++ + G+RV +
Sbjct: 113 RVTDHMPEVIEMIKKLIAKGHAYVAENNDVLFAVDSFKEYGQLSGQNLEMLRAGSRVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK + P EP W SPWG GRPGWHIECSAM+ +LG+VFDIHGGG DL F
Sbjct: 173 ESKRNPLDFVLWKMAKPAEPFWTSPWGNGRPGWHIECSAMNHKHLGEVFDIHGGGSDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS NF TI E+L + +
Sbjct: 233 PHHENEIAQSCCAHHGQ-YVNTWMHSGMVQVDKVKMSKSLKNFFTIKEVL-------KFF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------GIIDPAV 351
+ +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DSESVRYFLISGHYRSQLNYSEDNLKQARASLERLYNSVRDLTFSKDTPLDKTNLHYQQF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGI-----EVCK 398
+ A+ +D NT A+ L LA+E + + A++LG+ E
Sbjct: 345 IKAMDDDFNTPGALAVLFDLAKEINRLKQSNIKQASLSAGLLVTLANVLGLLNQSAEQFL 404
Query: 399 EHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ KN +A IE L+++R + K ++SAD R +L + +LED G T W
Sbjct: 405 QGDEKNEEVAMIEALIKQRNDARQNKDWASADSARDKLAALKIVLED------GPGGTTW 458
Query: 458 KQK 460
+++
Sbjct: 459 RKQ 461
>gi|303253060|ref|ZP_07339211.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|307247903|ref|ZP_07529938.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
gi|302648092|gb|EFL78297.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. 4226]
gi|306855594|gb|EFM87762.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
2 str. S1536]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEVAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|307250157|ref|ZP_07532117.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
gi|306857822|gb|EFM89918.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
4 str. M62]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L + P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEGMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|56961911|ref|YP_173633.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
gi|61216140|sp|Q5WLT3|SYC_BACSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56908145|dbj|BAD62672.1| cysteinyl-tRNA synthetase [Bacillus clausii KSM-K16]
Length = 466
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 249/487 (51%), Gaps = 54/487 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++N+L K F I+ ++MY CGPTVY++ HIGNARP IV+D++ R L Y +
Sbjct: 1 MIKLFNSLTNKKEPFVPIEEGKVKMYCCGPTVYNYIHIGNARPPIVYDMVRRYLTYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V N TD+DDKII A + + + ++ + + + + DT L P
Sbjct: 61 --VTFVSNFTDVDDKIIRAANE------LGEEVAAVAERFIKAYYADTCALNVKEADLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T + +I I ++ G AYEA ++ F T YG S + +D+ + G R+
Sbjct: 113 RVTETMDDIIAFIADLEKKGFAYEAGGDVYFRTRKFNGYGKLSGQALDDLQSGARIEVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P E W SPWG GRPGWHIECSAM LG DIH GG DL FP
Sbjct: 173 RKEDPLDFVLWKAAKPNEISWSSPWGEGRPGWHIECSAMIKKSLGDTIDIHAGGKDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS +K AN W+HNGF+N+ KMSKS GNF+ ++++ + +
Sbjct: 233 HHENEIAQSEALTG-KKLANYWMHNGFVNINNEKMSKSLGNFVLAHDII-------QQYS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
V+R ML HYR PI+F+ + L AE L + T +
Sbjct: 285 PEVVRFFMLTAHYRTPINFSDELLKGAEAGLERLKNTVANLQHRLAETADMGAEEEWLEK 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
+ + +D N+ +AI L LA+E+ + L +F +L
Sbjct: 345 IAGAKQRFIEEMDDDFNSANAISVLFDLAKEANIYMSEAQTSKKVLNAFLELFAEFGEVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ ++ + + IE L++ER + K + F+ AD IR L+ K +LED
Sbjct: 405 GVSFTQQE-EELLDAEIEALIEERNVARKERNFARADEIRDLLKEKNIVLEDT------P 457
Query: 453 RMTRWKQ 459
+ RWK+
Sbjct: 458 QGVRWKR 464
>gi|165976334|ref|YP_001651927.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|307261399|ref|ZP_07543074.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
gi|229558613|sp|B0BPJ8|SYC_ACTPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|165876435|gb|ABY69483.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
3 str. JL03]
gi|306869130|gb|EFN00932.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
12 str. 1096]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|154502843|ref|ZP_02039903.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
gi|153796726|gb|EDN79146.1| hypothetical protein RUMGNA_00658 [Ruminococcus gnavus ATCC 29149]
Length = 468
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 184/485 (37%), Positives = 253/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT+ + EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKLYNTMSKTKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E + I+ + ++ KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKANEEGVTAE------EISKRYIEECKKDMEGMNVKPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +IQ +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATEEIGGMIDMIQTLIDKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLQSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++ DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ + + W+HNGFLN++ RKMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSEAANG-KDFSKYWLHNGFLNIDNRKMSKSLGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ V+R ML HYR P++F+ + + A+ L + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERIVTAAEHLKFLLEGAKTENMTEKEQ 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT AI A+ L + N D LL A
Sbjct: 345 AKIVKSQEFTRKFEKAMDDDFNTADAIAAVFDLVKFINTNTDGESSKEYLQNLLSQLVAL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI V KE + ++ IE L+ ER K + F+ AD IR +L +KG ILED +
Sbjct: 405 TDVLGIIVEKEQ--EMLADDIEALIAERQAARKERNFARADEIRDELLAKGIILEDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VKWKR 467
>gi|307131980|ref|YP_003883996.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
gi|306529509|gb|ADM99439.1| cysteinyl-tRNA synthetase [Dickeya dadantii 3937]
Length = 461
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 253/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I+ +T + + D L P +P
Sbjct: 61 --VKYVRNITDIDDKIIKRATENG------ETITQLTDRMIGEMHTDFDALNIQRPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I ++I L++ +I HAY N +++F + P YG+ SR+ +++ K G RV
Sbjct: 113 RATHYIAEIIELVEQLIARRHAYVANNGDVMFSVDTAPGYGALSRQDLEQLKAGARVEIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKAGEPSWPSPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H G + ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSTCAHGGE-YVNYWMHTGMVMVDREKMSKSLNNFFTMRDVL-------MHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A IR ++ HYR +++T + L +A L + + +
Sbjct: 285 DAETIRYFLISGHYRSQLNYTEENLKQARASLERLYTALRGTDAAASAAGGDAFESRFRD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L A +LG+ L
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDAAAANGLAAALRRLAGVLGLLEQDPELFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R + K ++ AD R +L G +LED G + T W
Sbjct: 405 GAQADDGEVQEIEALIKQRNDARQSKDWALADAARNRLTEMGIVLED------GPQGTIW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|261345727|ref|ZP_05973371.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
gi|282566216|gb|EFB71751.1| cysteine--tRNA ligase [Providencia rustigianii DSM 4541]
Length = 462
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 179/484 (36%), Positives = 255/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLQIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAISRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRN+TDIDDKII+RA + N+++ +T++ + KD L L P +P
Sbjct: 61 L--NYVRNVTDIDDKIIKRAAEN------NESVEELTTRMLAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L +++I GHAY N +++F+ + PNYG SR+ +D+ + G RV
Sbjct: 113 RATRHIHEIIELTESLIERGHAYVADNGDVMFEVKTDPNYGLLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWESPWGLGRPGWHIECSAMNSKTLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L + +
Sbjct: 233 PHHENEIAQSTCAH-EGPYVNYWMHSGMVMVDREKMSKSLNNFFTIRDVL-------QYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
A +R +L HYR +++T + L +A L +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDKSVAPAGGEAFKARFCE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + + A +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDIAREINRLKTEDMAAANGMAAQLRELAKVLGLLEQEPEAFLQG 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ IE L+++R + K ++ AD R L + G +LED T
Sbjct: 405 GAQGEDDAEVAKIEALIKQRNDARQSKDWALADQARDALTAMGVVLEDS------SAGTT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|307266362|ref|ZP_07547900.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|306918598|gb|EFN48834.1| cysteinyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
Length = 466
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 254/488 (52%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R E + ++ + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA++E N + K ++ KD L T P+
Sbjct: 59 KVNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AY N + F+T+ +YG S + I+E + G R+
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK P EP W+SPWG+GRPGWHIECS MS+ YLGK DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G+LN+ KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSEAAY-EQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
V+RL MLM HYR PI+F++ + +A + + +
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344
Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI L ++A+ S N +L +F + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + + I L++ER K K + AD IR +L KG ILED
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|16272052|ref|NP_438251.1| cysteinyl-tRNA synthetase [Haemophilus influenzae Rd KW20]
gi|260580618|ref|ZP_05848445.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
gi|1174501|sp|P43816|SYC_HAEIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1573026|gb|AAC21753.1| cysteinyl-tRNA synthetase (cysS) [Haemophilus influenzae Rd KW20]
gi|260092680|gb|EEW76616.1| cysteinyl-tRNA synthetase [Haemophilus influenzae RdAW]
Length = 459
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 182/481 (37%), Positives = 259/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEYFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVATFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+ +
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K +S+AD R +L + G +LED N T W++
Sbjct: 405 GSNDDEVAKIEALIKQRNEARTAKDWSAADSARNELTAMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|323705641|ref|ZP_08117215.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323535118|gb|EGB24895.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 464
Score = 407 bits (1046), Expect = e-111, Method: Composition-based stats.
Identities = 185/488 (37%), Positives = 265/488 (54%), Gaps = 58/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK EF ++ + + MYVCGPTVY+F HIGNAR IVFD + R L Y
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNVVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDK+I+R+ +E N + + + +++ KD L T PR
Sbjct: 59 KVNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATFHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I ++I ++ +I G AYE + + +DT+ +YG S + IDE K G R+
Sbjct: 113 ATENIKEIIEFVKKLIDKGFAYEKDGNVYYDTTKFKDYGKLSHKNIDELKAGARIEVNED 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK + EP W+SPWG+GRPGWHIECS MS+ +LGK DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKFLGKTLDIHAGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A+ E A W+H G+LN+ KMSKS NF T+ +++ +
Sbjct: 233 HENEIAQSEAANDAE-FAKYWMHIGYLNINNEKMSKSKNNFFTVRDVIS-------QYDP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
V+R MLM+HYR PI+++ + +A+ + T +
Sbjct: 285 EVLRFFMLMSHYRNPINYSQDLIEQAKNGYLRLSNTVYNLQHLLDVAEDRQLSDEEKAYK 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI + ++ R+ N D +L +F + +
Sbjct: 345 EKYEEYRRKFEEAMDDDFNTADAISVIFEMVRDINSNIDGNSPKELIKYILDVFLNLSSV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI K+ L + I++L+++R K K ++ AD IR +L+ +G +LED N
Sbjct: 405 LGITYKKKEL---LDDEIKELIEKRQEARKAKNWAEADRIRDELKKQGIVLEDTPN---- 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 --GVRWKR 463
>gi|23015242|ref|ZP_00055024.1| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
magnetotacticum MS-1]
Length = 460
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 214/481 (44%), Positives = 274/481 (56%), Gaps = 46/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R F+ + P ++ MYVCGPTVYD AHIGNARP+IVFDVLYRLL+ Y
Sbjct: 1 MPLVLYNTLTRTKDVFEPLVPGHVGMYVCGPTVYDRAHIGNARPVIVFDVLYRLLKTLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRN+TD+DDKI +A+ + IS+IT + T F +D L CL P +
Sbjct: 60 -PSVRYVRNVTDVDDKINAKAKATG------EPISVITERTTALFHEDIGALNCLMPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI +I+ +I G AY A ++F ++ +YG+ SRR DE G RV
Sbjct: 113 PRATAHIGQMIAMIERLIEKGFAYAAEGHVLFAVGAMADYGALSRRSSDEMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK+P DF+LWK S+ PGW+SPWGRGRPGWHIECSAMS +LG+ FDIHGGG DL+F
Sbjct: 173 PYKKDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSLQHLGETFDIHGGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ + A W+HNG+L +EG KMSKS GNF T+ +LL
Sbjct: 233 PHHENEIAQSTCANG-KPFARFWLHNGWLMVEGEKMSKSLGNFFTVRDLLGQA------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
P IRLAML THY +P D+T L +A+ L + +D +L+
Sbjct: 285 PGEAIRLAMLATHYHQPFDWTSDGLKQAKATLDRLYTALRGAADVDASGYEAEVPLEMLA 344
Query: 354 ALYNDLNTVSA-IQALHKLARESTKNHDL------LPIFNASAHILGIEVCKEH------ 400
AL +DLNT I LH+LA K L AS H+LG+
Sbjct: 345 ALKDDLNTPLXPISHLHELAGALNKATGLEDKARRKGALLASGHLLGLLYQDPEAWFKGT 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE + R K K F+ AD IR+ L +KG +LED G T WK
Sbjct: 405 GAADGPADAEIEAAIIARTEARKAKNFAEADRIRQDLAAKGVVLED------GAGGTTWK 458
Query: 459 Q 459
+
Sbjct: 459 R 459
>gi|15602810|ref|NP_245882.1| cysteinyl-tRNA synthetase [Pasteurella multocida subsp. multocida
str. Pm70]
gi|13431884|sp|P57890|SYC_PASMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|12721267|gb|AAK03029.1| CysS [Pasteurella multocida subsp. multocida str. Pm70]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 187/481 (38%), Positives = 258/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD H+G+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + N+ + + K + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALEN------NETCNQLVEKMIAEMHKDFDALNVLRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +I+ +I HAY + N +++FD S YG SR+ +++ + G RV
Sbjct: 113 RATHHIPEIIAMIEKLIARQHAYVSANGDVMFDVESFKEYGKLSRQNLEQLQAGARVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL F
Sbjct: 173 NVKKNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNHKELGEHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSCCAH-SGRYVNYWIHSGMIMVDREKMSKSLGNFFTLREVLSL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ + L A L + A
Sbjct: 285 DAESVRYFLLTAHYRSQLNYSEENLNLAHSALERLYTALRGTDPTAVATEGQNYLAAFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT AI L ++ARE K + L A ILG+
Sbjct: 345 AMDDDFNTPKAISVLFEIAREINKLKNEDILKANALAARLRELAGILGLLYQDPEQFLQS 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++SAD R +L G +LED N T W++
Sbjct: 405 GSDNDEVALIEALIKQRNDARAAKDWASADAARNKLAEMGVVLEDNVN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|307256969|ref|ZP_07538746.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
gi|306864544|gb|EFM96450.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
10 str. D13039]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVCLKELAAVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|289579166|ref|YP_003477793.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289528879|gb|ADD03231.1| cysteinyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 466
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 252/488 (51%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EFQ ++ + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA++E N + K ++ KD L T P+
Sbjct: 59 KVNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AY N + F+T+ YG S + I+E + G R+
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKGYGKLSHKNIEELQAGARIEINEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK P EP W+SPWGRGRPGWHIECS MS+ YLGK DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ + W+H G+LN+ KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSEALYG-QQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA---------- 354
V+RL ML+ HYR PI+F++ + +A + + +
Sbjct: 285 EVLRLFMLIAHYRNPINFSLDLMDQANSAYERLLNAVANLKHLFTVCKERELNEEEKRIV 344
Query: 355 -------------LYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
+ +D NT AI L ++A+ + N +L +F + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + I L+++R K K + AD IR +L KG ILED
Sbjct: 405 LGL-FYRSVKTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|153000119|ref|YP_001365800.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|304409708|ref|ZP_07391328.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|307304064|ref|ZP_07583817.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
gi|187631634|sp|A6WLP8|SYC_SHEB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151364737|gb|ABS07737.1| cysteinyl-tRNA synthetase [Shewanella baltica OS185]
gi|304352226|gb|EFM16624.1| cysteinyl-tRNA synthetase [Shewanella baltica OS183]
gi|306912962|gb|EFN43385.1| cysteinyl-tRNA synthetase [Shewanella baltica BA175]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 RATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L + RE + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R +L G LED G T W++
Sbjct: 405 GGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|260462295|ref|ZP_05810503.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
gi|259031789|gb|EEW33057.1| cysteinyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
Length = 482
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 251/480 (52%), Positives = 329/480 (68%), Gaps = 24/480 (5%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++YNTL R +F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 5 SKGLRLYNTLTRTKADFTPIDALNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLA 115
GE VTYVRNITD+DDKI RA ++ + +N+AI +T K QF +D L
Sbjct: 65 GETHVTYVRNITDVDDKINARALRDFGDEISAGKLSLNEAIRRVTEKTADQFHRDVATLG 124
Query: 116 CLAPTHQPRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
CL PT +PRAT + MI LIQ++I GHAY A E++FDT+S+P+YG S+R
Sbjct: 125 CLEPTVEPRATEFVEPRADGKADMISLIQSLIERGHAYVAAGEVLFDTASMPDYGQLSKR 184
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+DEQ+ G R+ HKKNP DF+LWK S+P EPGW SPWGRGRPGWHIECSAMS+ YLG
Sbjct: 185 NLDEQQAGARIAVDAHKKNPGDFVLWKLSSPEEPGWRSPWGRGRPGWHIECSAMSAAYLG 244
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+VFDIHGGGLDLIFPHHENEIAQS CA + AN+W+HNGFL +EG+KMSKS GNF +I
Sbjct: 245 EVFDIHGGGLDLIFPHHENEIAQSRCAHGTDVMANVWMHNGFLQVEGQKMSKSLGNFYSI 304
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKG 345
+ELLET+ FGGR+WP V+RLAMLMTHYREPIDF++++L EAE L KW + + + G
Sbjct: 305 HELLETETFGGRNWPGEVLRLAMLMTHYREPIDFSMRKLEEAENTLRKWKRAADLAPTAG 364
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEH 400
+ V+ AL +DL T +A Q L +LA E+++ + A+ LG ++
Sbjct: 365 QLPAKVVEALSDDLATYAAFQQLTQLAGEASEVEGHGENAAAASLKAALLFLGFDIGAAR 424
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ + + + RL L+ K ++ AD IR L ++G L+D K+P G+R+T W+ K
Sbjct: 425 VDE---AEVARSIARRLELIAAKNWAEADRIRDDLLAQGVQLKDGKDPVTGERVTTWEVK 481
>gi|325267558|ref|ZP_08134210.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
gi|324980908|gb|EGC16568.1| cysteine--tRNA ligase [Kingella denitrificans ATCC 33394]
Length = 487
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 177/489 (36%), Positives = 256/489 (52%), Gaps = 51/489 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I +YNTL R+ EF ++P N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +
Sbjct: 14 NMPITLYNTLTRQKEEFVPLNPENVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+TYVRNITDIDDKII RA + + I +T++ +D+ L L P
Sbjct: 74 Y--PLTYVRNITDIDDKIIARANENG------ETIGELTARFIAAMNEDSDALGVLRPDI 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI QMI +I++++ +G AY N ++ + YG S + +D+ + G RV
Sbjct: 126 EPKATEHIGQMIAMIEDLVANGKAYPAPNGDVYYAVREFAEYGQLSGKSLDDLRAGERVD 185
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK + P EP WESPWG GRPGWHIECSAM G+ FDIHGGG DL
Sbjct: 186 VDANKRDPLDFVLWKAAKPGEPSWESPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADL 245
Query: 241 IFPHHENEIAQSCCADR--------------IEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
FPHHENEIAQSC A I W+HNGF+ ++ KMSKS GNF
Sbjct: 246 QFPHHENEIAQSCGAHGGLCGHDAPHAAGKRINSHVKYWLHNGFIRVDNEKMSKSLGNFF 305
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
TI ++L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 306 TIRDVL-------KKYAPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLGNVQA 358
Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILG 393
+A+ +D NT A+ L +LA E+ K + +L A LG
Sbjct: 359 AEFAVREDANDYTRRFFAAMDDDFNTAEAMSVLFELANEANKTGSAELAGCLKALGGTLG 418
Query: 394 IEVCKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+ +R + K ++ +D IR L +L+D
Sbjct: 419 LLQDDPQHFLQSGGEEGGLSADEIEALITQRKTARETKNWAESDRIRDLLAEHKILLKDG 478
Query: 446 KNPDNGQRM 454
+ R
Sbjct: 479 ADGTTWTRG 487
>gi|240103606|ref|YP_002959915.1| cysteinyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|259511844|sp|C5A739|SYC_THEGJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|239911160|gb|ACS34051.1| Cysteinyl-tRNA synthetase (cysS) [Thermococcus gammatolerans EJ3]
Length = 476
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 182/495 (36%), Positives = 251/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ EF+ + +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MAIRIYNTLTRQKEEFKPLHEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII+RA + + + K + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIKRANETG------EDPKELAEKFLRIFLEDMKALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I I+ + G+AYE ++ + F+ +YG S+ K+++ G RV
Sbjct: 113 PRVTEHMQDIISFIKKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E + W+H GFL + G KMSKS GNF+T+ ELL + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
VIRL +L HYR P+D++ + + A+ L +
Sbjct: 285 NPEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMSKAEISFRWDEPEF 344
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ + F
Sbjct: 345 RAYEAIRDARKKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVEKPKESILRKAWEFFK 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ G+ + KE +N I LV+ R L K KKF AD IR++L G LED
Sbjct: 405 DVGEVFGLFEDYFKEQKAENDEELINLLVEVRAQLRKEKKFDLADKIREELRKLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 T------PQGTVWKR 473
>gi|240949657|ref|ZP_04753992.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
gi|240295915|gb|EER46591.1| cysteinyl-tRNA synthetase [Actinobacillus minor NM305]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 186/480 (38%), Positives = 263/480 (54%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ I MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII+RA + + + + + KD L L P +P
Sbjct: 60 -NVRYVRNITDVDDKIIKRALENK------ETCDQLVDRMIAEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY + +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF +I +L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R L HYR +D++V+ L A L + + A +
Sbjct: 285 DAESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTALRGCDVSGAAEGGEHYVEAFKT 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPESFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN------GTIWRK 458
>gi|160874741|ref|YP_001554057.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|187631635|sp|A9KWH4|SYC_SHEB9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160860263|gb|ABX48797.1| cysteinyl-tRNA synthetase [Shewanella baltica OS195]
gi|315266983|gb|ADT93836.1| cysteinyl-tRNA synthetase [Shewanella baltica OS678]
Length = 459
Score = 407 bits (1045), Expect = e-111, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 RATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L + RE + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R +L G LED G T W++
Sbjct: 405 GGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|257464496|ref|ZP_05628867.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
gi|257450156|gb|EEV24199.1| cysteinyl-tRNA synthetase [Actinobacillus minor 202]
Length = 459
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 187/480 (38%), Positives = 265/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ I MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQIGMYVCGVTVYDLCHFGHGRTFVSFDVIVRYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII+RA + + + + + KD L L P +P
Sbjct: 60 -NVRYVRNITDVDDKIIKRALENK------ETCDQLVDRMIAEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I +GHAY + +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIIAMVEKLIANGHAYVAEDGDVMFDVESFKQYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKENEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF +I +L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R L HYR +D++V+ L A L + + + A +
Sbjct: 285 DAESLRYFFLTAHYRSLLDYSVENLDLARSALERLYTSLRGCDVSGVAEGGEHYVEAFKT 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+ +
Sbjct: 345 AMDDDFNTPGALAVLFEIARELNKLKIEDMAKANGLAVRLKELAGVLGLLEQEPESFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DTNSDEAAEIEALIKQRNEAKANKNWAVADEVRDKLKAMNIVLEDTPN------GTIWRK 458
>gi|153839789|ref|ZP_01992456.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149746697|gb|EDM57685.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 463
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 178/485 (36%), Positives = 253/485 (52%), Gaps = 47/485 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++ +KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 IEIMLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ T+VRNITDIDDKII+RA + ++ +T + D L P
Sbjct: 61 GYDL--TFVRNITDIDDKIIKRAAENG------ESCESLTERLIGDMHADFDALNMKRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV
Sbjct: 113 VEPRATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG D
Sbjct: 173 DIETAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 233 LQFPHHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG------ 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPA 350
+ A +R ++ HYR ++++ L +A L + +
Sbjct: 286 -HYDAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSR 344
Query: 351 VLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL- 401
+A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 FTAAMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAF 404
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
N + IE L++ R K +++AD R +L G +LED G T
Sbjct: 405 LKGNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGT 458
Query: 456 RWKQK 460
W++K
Sbjct: 459 TWRRK 463
>gi|330830124|ref|YP_004393076.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
gi|328805260|gb|AEB50459.1| Cysteinyl-tRNA synthetase [Aeromonas veronii B565]
Length = 458
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 179/479 (37%), Positives = 245/479 (51%), Gaps = 45/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYAGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + +T + D L + P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRAAE------TRVTCDELTERLIGDMHADFDALGMVRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L+Q+++ HAY N +++F S +YG S + +++ + G RV
Sbjct: 113 RATQHIEEIIELVQSLLEKEHAYVADNGDVMFIVESYADYGKLSGQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
A +R ++ HYR ++++ L +A L + A
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFKEA 344
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A AL L RE + L +LGI
Sbjct: 345 MDDDFNTPEAYSALFDLVREINRQKAEDMVVAAALGARLRELGAVLGILQQDPEAFLKGD 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE+L+ ER K +++AD R +L G +LED T W++
Sbjct: 405 EADEEVAEIERLIAERNQARADKNWAAADAARNRLTEMGIVLEDS------AGKTSWRR 457
>gi|282857764|ref|ZP_06266973.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584434|gb|EFB89793.1| cysteine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 474
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 180/495 (36%), Positives = 254/495 (51%), Gaps = 59/495 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN L RK F + + Y CGPTVYD+ HIGNARP IVFDVL R L +
Sbjct: 1 MALALYNDLTRKKEPFVPLHEGKVAFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+N TDIDDK+I RA ++ ++ + K + +D L +
Sbjct: 61 E--VTFVQNFTDIDDKMIARANRDGVTV------QQLAEKTIADYYEDADALGIKRASFY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +IP++I +IQ II +GHAY A+ + FD S P YG S + +D+ + G R+
Sbjct: 113 PRATEYIPKIIAMIQRIIDNGHAYVADGTVFFDVKSFPAYGKLSHQNLDDLQSGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECSAMS+ LG DIH GG+DL+F
Sbjct: 173 DVKRSPLDFVLWKPQKPGEPAWESPWGLGRPGWHIECSAMSTDLLGDTVDIHTGGIDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A + W+HN ++ + KMSKS GNF+T + + +
Sbjct: 233 PHHENEIAQTEAATG-KPFVKYWLHNEYILINAEKMSKSLGNFLTA-------RAARQKF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
P IR+ ML HYR PI+FT + L +A + + +
Sbjct: 285 PPLAIRMFMLGAHYRSPINFTPEGLEQAAAAVERLRNCWSDLQFAKGGRLGETSAAGAAL 344
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDLLPIF 385
+A+ +D NT +AI + + E K
Sbjct: 345 MAALDTFRADFTAAMDDDFNTAAAIGVIFEAVTEVNKYLKGNEKLDPAAVAAAEKFFGDI 404
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++ I+GIE K+ + + + IE L+ ER K + F +D IR +L ++G ILED
Sbjct: 405 DSVMGIIGIEQEKKEESGDEAARIEPLIAERNAARKARDFKRSDAIRDELAAQGIILEDT 464
Query: 446 KNPDNGQRMTRWKQK 460
+ T+WK+K
Sbjct: 465 ------PQGTKWKKK 473
>gi|217973913|ref|YP_002358664.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
gi|254781693|sp|B8E5F2|SYC_SHEB2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|217499048|gb|ACK47241.1| cysteinyl-tRNA synthetase [Shewanella baltica OS223]
Length = 459
Score = 406 bits (1044), Expect = e-111, Method: Composition-based stats.
Identities = 178/481 (37%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 RATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L + RE + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R +L G LED T W++
Sbjct: 405 GGSDDEVAEIEALIVERNRARTEKDWAAADVARNRLNELGVELEDS------PSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|297545336|ref|YP_003677638.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296843111|gb|ADH61627.1| cysteinyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 466
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 253/488 (51%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EFQ ++ + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MKLYNTLSRTKEEFQPLNDKVVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA++E N + K ++ KD L T P+
Sbjct: 59 KVNYVQNFTDIDDKIIKRAQEE------NVTTKELAEKYIHEYFKDADNLGIKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI ++ I+ +I G+AY N + F+T+ +YG S + I+E + G R+
Sbjct: 113 ATEHIEDIVKFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK P EP W+SPWGRGRPGWHIECS MS+ YLGK DIH GG DLIFPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGRGRPGWHIECSVMSTKYLGKTLDIHAGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ + W+H G+LN+ KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSEALYG-QQFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA---------- 354
V+RL MLM HYR PI+F++ + +A + + +
Sbjct: 285 EVLRLFMLMAHYRNPINFSLDLMDQANSAYERLLNAMANLKHLLTVCKERELNEEEKRIV 344
Query: 355 -------------LYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
+ +D NT AI L ++A+ + N +L +F + I
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTANINLSGNSSKELVKYILDMFLKLSEI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + I L+++R K K + AD IR +L KG ILED
Sbjct: 405 LGL-FYRTVKTDIDDEEILALIEKRQQARKEKNWKLADEIRDRLREKGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|303251228|ref|ZP_07337406.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|307252540|ref|ZP_07534436.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|302649770|gb|EFL79948.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
gi|306860132|gb|EFM92149.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
6 str. Femo]
Length = 459
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 183/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L + P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|312171645|emb|CBX79903.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC BAA-2158]
Length = 507
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 186/485 (38%), Positives = 252/485 (51%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R FDV+ R LRY
Sbjct: 45 SMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY 104
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YVRNITDIDDKII+RA + ++I +T + + KD L L P +
Sbjct: 105 QL--NYVRNITDIDDKIIKRAHENG------ESIEQLTQRMIGEMHKDFAALNILPPDLE 156
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
PRAT HI ++I L++ +I HAY +N +++F S YGS SR+ +D+ + G RV
Sbjct: 157 PRATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEV 216
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 217 TADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 276
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS A N W+H+G + ++ KMSKS NF T+ ++LE
Sbjct: 277 MFPHHENEIAQSTSAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE------- 328
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 329 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARF 388
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH--- 400
+A+ +D NT A AL LARE + L +LG+
Sbjct: 389 RAAMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFL 448
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+N IE L+Q R+ K K ++ AD R +L G +LED G T
Sbjct: 449 QSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGT 502
Query: 456 RWKQK 460
RW++K
Sbjct: 503 RWRRK 507
>gi|254172364|ref|ZP_04879039.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033293|gb|EEB74120.1| cysteinyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 476
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 179/495 (36%), Positives = 252/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ EF+ + +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MAIRIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII+RA + + + + + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIKRANETG------EDPKELAERFLRIFLEDMKALKVKPADVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ ++I ++ + G+AYE ++ + F+ +YG S+ K+++ G RV
Sbjct: 113 PRVTEHMDEIINFVKKLEEKGYAYEGSDGVYFEVRKFKDYGKLSKIKLEDLVKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKRNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSSKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E + W+H GFL + G KMSKS GNF+T+ ELL + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVHYWMHTGFLMVNGEKMSKSLGNFVTVRELL-------KRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
VIRL +L HYR P+D++ + + A+ L + T
Sbjct: 285 DPEVIRLFVLQRHYRSPLDYSEEGIEHAKNNLERLYNTLENIRVAMGRAEISFRWDEPEF 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ + F
Sbjct: 345 RVYEAIRDARRKFYEAMDDDFNTAEALKAVFEVSNAINRYLTEVETPKESILRKAWEFFR 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ G+ + KE N I+ L++ R L K +KF AD IR +L G LED
Sbjct: 405 DVGEVFGLFEDYFKEQRAGNEEALIDLLIEVRAQLRKERKFDLADRIRDELRKLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 T------PQGTVWKR 473
>gi|299133613|ref|ZP_07026807.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
gi|298591449|gb|EFI51650.1| cysteinyl-tRNA synthetase [Afipia sp. 1NLS2]
Length = 464
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 234/468 (50%), Positives = 307/468 (65%), Gaps = 25/468 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL + F+ IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MELRLYDTLTKDKRAFKPIDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E+ VTYVRNITD+DDKI +RA +++P +P+N+AI +T K QF D L CL PT +
Sbjct: 61 EQHVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFHADVDALGCLKPTVE 120
Query: 123 PRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT+ + M+ LI+ +I GHAYEAN E++FDT+S+P+YG S R++DEQ+
Sbjct: 121 PRATDFVLPRADGKADMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGKLSGRRLDEQQA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G R+ HKK+PADF+LWK+S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARIAVDAHKKHPADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGDVFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HNGFL +EG KMSKS GNF+TINELL
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELL--- 297
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--AVLS 353
+ WP V+RL ML THYR PID+TV+ L E+ +L W T+ P VL
Sbjct: 298 ----KDWPGEVVRLNMLKTHYRSPIDWTVKGLEESAKVLDDWYATAGDIKGSAPAGTVLD 353
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGIEVC--------KEHLNKN 404
L +DLNT + ALH L ++ + + F +S +LG K+ +
Sbjct: 354 TLADDLNTAQTVAALHGLRHQAERGGEAERNEFASSLRLLGFLAETRADWDARKQEASGV 413
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + L+ +R K + +D IR +L + G ++D K +
Sbjct: 414 DAAQVSALIADRTAARARKDWKESDRIRDELAAMGVAIKDSKEGTTWE 461
>gi|117617683|ref|YP_857264.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
gi|117559090|gb|ABK36038.1| cysteinyl-tRNA synthetase [Aeromonas hydrophila subsp. hydrophila
ATCC 7966]
Length = 458
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 175/479 (36%), Positives = 246/479 (51%), Gaps = 45/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRN+TD+DDKII+RA + + +T++ D L + P +P
Sbjct: 61 L--NYVRNVTDVDDKIIKRAAETGVT------CDDLTARLIGDMHADFDALGMVRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L+Q+++ HAY N +++F S +YG S + +++ + G RV
Sbjct: 113 RATQHIGEIIELVQSLLDKEHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DAKRNPLDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
A +R ++ HYR ++++ L +A L + A
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPAAAAAGGDEQVARFKEA 344
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A AL L RE + L +LGI
Sbjct: 345 MDDDFNTPEAYSALFDLVREINRQKGEDMAVAAALGARLRELGAVLGILQQDPEAFLKGD 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE+L+ +R K +++AD R +L G +LED T W++
Sbjct: 405 EADEEVAEIEQLIAQRNQARADKNWAAADAARNRLTEMGIVLEDS------AGKTSWRR 457
>gi|237747642|ref|ZP_04578122.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229379004|gb|EEO29095.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 462
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 192/480 (40%), Positives = 267/480 (55%), Gaps = 45/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L R F I+P +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+ E
Sbjct: 3 SLQIYNSLTRSKEVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKATGYE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + + IS +TS+ TQ +DT L L P H+P
Sbjct: 63 --VTYVRNITDIDDKIINRAAENG------EPISSLTSRFTQYMHEDTCALGILPPDHEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++P+M+ LI + +G AY+ + ++ + YG S + +D+ + G RV
Sbjct: 115 RATEYVPEMLELIGKLEKNGLAYQSTDGDVNYSVRDFEGYGKLSGKSLDDLRAGERVDIN 174
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP W S WG GRPGWHIECSAMSS LG+ FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKSAKPTEPEEAKWPSRWGTGRPGWHIECSAMSSKLLGEHFDIHGGGAD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 235 LQFPHHENEIAQSEGASH-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL------- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDP 349
+S+ A V+R ++ +HYR P++++ L +A+ L++ Q
Sbjct: 287 KSYDAEVLRFFIIRSHYRSPLNYSDAHLDDAKNALTRLYTALKDVDVKDQAVDWDSEYAK 346
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKE-------- 399
SA+ +D NT A+ L +LA E + H +L A A +LG+
Sbjct: 347 RFASAMNDDFNTPEAVAVLFELANEVNRTHLAELGSQLKALAGVLGLLERDPRQFLQGDG 406
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE +Q R+ K K F+ AD IR +L KG +LED T W++
Sbjct: 407 AVDEGEEKWIESQIQARIDAKKAKNFAEADKIRSELLEKGIVLEDKPGGL-----TEWRR 461
>gi|259909186|ref|YP_002649542.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|224964808|emb|CAX56330.1| Cysteinyl-tRNA synthetase [Erwinia pyrifoliae Ep1/96]
gi|283479232|emb|CAY75148.1| cysteine tRNA synthetase [Erwinia pyrifoliae DSM 12163]
Length = 462
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 187/484 (38%), Positives = 254/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I NI MYVCG TVYD HIG+ R FDV+ R LRY +
Sbjct: 1 MLKIYNTLSRQKEEFKPIHAGNIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITDIDDKII+RA + ++I +T++ + KD L L P +P
Sbjct: 61 L--KYVRNITDIDDKIIKRANENG------ESIERLTNRMIDEMHKDFAALNILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L++ +I HAY +N +++F S P YGS SR+ +D+ + G RV
Sbjct: 113 RATRHIAEIIELVEKLITREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVA 172
Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ L + FDIHGGG DL+
Sbjct: 173 ADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLSEHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L +
Sbjct: 233 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 285 YDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTRATPAGGEEFEARFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D NT A AL LARE + L +LG+
Sbjct: 345 EAMDDDFNTPEAYSALFDLAREVNRMKGEDPAAADGLAARLRVLGGVLGLLEQDPQQFLQ 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+N IE L+Q R+ K K ++ AD R +L G +LED G TR
Sbjct: 405 SGVNINDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTR 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|307245827|ref|ZP_07527913.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|307254800|ref|ZP_07536627.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|307259241|ref|ZP_07540971.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
gi|306853529|gb|EFM85748.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
1 str. 4074]
gi|306862326|gb|EFM94293.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
9 str. CVJ13261]
gi|306866908|gb|EFM98766.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
11 str. 56153]
Length = 459
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L + P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNIIRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|307822084|ref|ZP_07652316.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
gi|307736650|gb|EFO07495.1| cysteinyl-tRNA synthetase [Methylobacter tundripaludum SV96]
Length = 492
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 257/483 (53%), Gaps = 47/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL RK FQ + MYVCG TVYD+ HIG+AR M+VFD + R R+ E
Sbjct: 31 MLKIYNTLTRKKEPFQPRVAGKVGMYVCGMTVYDYCHIGHARVMVVFDTVARYFRHQGYE 90
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII+RA + + +T + +D LA L P +P
Sbjct: 91 L--TYVRNITDIDDKIIQRAIENG------EDYGKLTERFIDAMHEDERALAVLPPDLEP 142
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I +I +I+ ++ AY +N ++ + + +YG S + +D+ + G RV
Sbjct: 143 RATQSIADIISMIKTLVDKDLAYVGSNGDVFYAVTKFKDYGRLSGKNLDDLQAGERVDVD 202
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG+DL F
Sbjct: 203 LAKRNPMDFVLWKMAKANEPAWDSPWGLGRPGWHIECSAMSTCCLGNHFDIHGGGMDLQF 262
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A EK N+W+HNGF+ ++ KMSKS GNF T+ E+L +
Sbjct: 263 PHHENEIAQSEGATG-EKFVNVWMHNGFVRVDDEKMSKSLGNFFTVREVL-------NQY 314
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
+IR +L +HYR P++++ ++L +A+ L++ +
Sbjct: 315 KPEIIRFFILSSHYRSPLNYSDEQLNDAKAALTRLYTALRGVETTAEAAIEEAYKTRFEQ 374
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------ 399
A+ +D NT A+ L LAR+ K + L + +LGI
Sbjct: 375 AMDDDFNTPVALAVLFDLARDLNKAKELDQQKACALAATLKYLSGLLGILQDDPDAFLKG 434
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+E+ +Q RL K K ++ AD IR L+ +G ILED + T W
Sbjct: 435 SGDAAVLGEETVEQQIQARLDAKKAKDWALADKIRNDLKEQGVILEDSPDGT-----TSW 489
Query: 458 KQK 460
+++
Sbjct: 490 RRE 492
>gi|218778624|ref|YP_002429942.1| cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218760008|gb|ACL02474.1| Cysteinyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 474
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 182/494 (36%), Positives = 254/494 (51%), Gaps = 60/494 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ + P ++ MYVCGPTVYD +HIG+AR +VFD+++R L+
Sbjct: 1 MALTLYNTLTRQKETFKPLKPGHVSMYVCGPTVYDSSHIGHARSAVVFDIVFRYLQESGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA + ++ +F +D LA L PT +
Sbjct: 61 E--VTYVRNFTDVDDKIINRANERDMD------CQALSEIYIDEFHRDMDALAVLRPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT I ++I + ++ GHAY + ++ FD S +YG S RK+++ + G RV
Sbjct: 113 PRATEFIKEIIEVTSKLVEKGHAYVVDGDVYFDVRSFESYGKLSGRKLEDMEAGARVKVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK P EP WESPWG GRPGWHIECSAMS LG+ FDIHGGG DLIF
Sbjct: 173 SRKKDPFDFALWKAKKPGEPAWESPWGEGRPGWHIECSAMSWSRLGETFDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A ++ W+HNGF+N++ KMSKS NF+T+ E+L+ +
Sbjct: 233 PHHENEVAQSEAAFG-QQFVRYWMHNGFVNIDSEKMSKSLNNFLTVKEILD-------QF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGIIDP 349
+RL +L HYR P+DFT Q + EA L +
Sbjct: 285 HPEAVRLFLLSKHYRSPVDFTEQAMKEAASGLDRVYSCLQRILESVGGLDDDFQISGHWS 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILG--- 393
+ + +D NT A+ L + R+ + D +LG
Sbjct: 345 RFCACMDDDFNTAGALGILFEAVRDVNRLLDGDLTGDDQVRATEAGAAIVKMGGVLGMFQ 404
Query: 394 ------IEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
E KE ++ ++ L+ +R K K +++AD IR QL G +ED
Sbjct: 405 EDPVAYFEGKKEQAAQDGGFDPAMVDDLIAKRSQARKDKDWNTADAIRDQLTEMGVAIED 464
Query: 445 YKNPDNGQRMTRWK 458
+ T WK
Sbjct: 465 TPD------GTIWK 472
>gi|85715405|ref|ZP_01046387.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
gi|85697826|gb|EAQ35701.1| cysteinyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
Length = 477
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 242/483 (50%), Positives = 310/483 (64%), Gaps = 36/483 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+TL ++ F IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR YG
Sbjct: 1 MELRLYDTLTKQKRVFDPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRNLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI +RA ++ P + +N+AI +T K QF D L CL PTHQ
Sbjct: 61 ADHVTYVRNITDVDDKINDRAARDFPGLSLNEAIRKVTEKTAAQFQADVAALGCLPPTHQ 120
Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT + M+ I+ +I GHAY+A E++FD S+P+YG+ S R+++EQK
Sbjct: 121 PRATEFVLPRADGKTDMVTFIKQLIARGHAYKAGGEVLFDVRSMPDYGALSGRRLEEQKA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G R+ HK+NPADF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG+VFDIHG
Sbjct: 181 GARIAVDEHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSAAYLGEVFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HNGFL +EG KMSKS GNF+TINELL T
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGSHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTG 300
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
KFGGR WP V+RL ML THYR+PID+T + L E+E +L +
Sbjct: 301 KFGGRKWPGEVLRLNMLRTHYRQPIDWTTKALEESETILRRICGRIKQFDDARRGMAMKE 360
Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-- 398
+ P +L AL +DLNT I + +L + + LL I GI+V
Sbjct: 361 RSGQPKLSPEILEALVDDLNTPLMISRVGELNHDDAFDQALLSI--------GIDVFSYA 412
Query: 399 ---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ +++LV RL K K F +D IR +L + G +L+D K+ D +T
Sbjct: 413 RWLRSQEQQAGSNVDELVAARLEARKRKDFKESDRIRDELAAMGVVLKDSKDADGKP-VT 471
Query: 456 RWK 458
W+
Sbjct: 472 TWE 474
>gi|323494384|ref|ZP_08099494.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
gi|323311367|gb|EGA64521.1| cysteinyl-tRNA synthetase [Vibrio brasiliensis LMG 20546]
Length = 460
Score = 406 bits (1043), Expect = e-111, Method: Composition-based stats.
Identities = 178/482 (36%), Positives = 255/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I+ + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY +N +++F+ YG S++ +D+ + G RV
Sbjct: 113 RATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
+ +R ++ HYR ++++ + L +A L + + + P
Sbjct: 285 DSETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTTPAAGGEEYVSRFTE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLP------IFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K D+ + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRIKAEDIAAASALGSLMRELADVIGILYQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|127513439|ref|YP_001094636.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
gi|187631636|sp|A3QFX9|SYC_SHELP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126638734|gb|ABO24377.1| cysteinyl-tRNA synthetase [Shewanella loihica PV-4]
Length = 459
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 254/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ EF+ I P + MYVCG T+YD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKLYNSLTRQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVAFDMIVRYLRYIGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + ++ +T + TQ+ D L P +P
Sbjct: 61 --VNFHRNITDVDDKIIKRATENG------ESCDALTERLTQEMYHDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P++I +++ ++ HAY N +++F +S P YG S + +D+ + G RV
Sbjct: 113 RATQHMPEIIEMVERLLERDHAYIADNGDVLFSVASFPEYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL F
Sbjct: 173 ENKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGEHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ L +A+ L +
Sbjct: 285 DASTVRYFLLSGHYRSQLNYSEDNLKQAKAALERLYTALKGLDLSVEAAPASEYVAKFKE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKE 399
A+ +D NT A L +ARE K DL +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKVDDLAAASALGVSMKQLGDVLGILEQDVDGFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R L + G ILED G T W++
Sbjct: 405 EGSDDEVAQIEALIAERNRARTEKDWAAADVARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|260902702|ref|ZP_05911097.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|308108249|gb|EFO45789.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 460
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 178/482 (36%), Positives = 251/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCESLTERLIGDMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFISEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 NAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|254229902|ref|ZP_04923306.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262394608|ref|YP_003286462.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|151937606|gb|EDN56460.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262338202|gb|ACY51997.1| cysteinyl-tRNA synthetase [Vibrio sp. Ex25]
Length = 460
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 180/482 (37%), Positives = 254/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALNMKRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT IP++I L+Q +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFIPEIIELVQKLIERGFAYVADNGDVMFEVRKFDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|332306241|ref|YP_004434092.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
gi|332173570|gb|AEE22824.1| cysteinyl-tRNA synthetase [Glaciecola agarilytica 4H-3-7+YE-5]
Length = 464
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 175/485 (36%), Positives = 249/485 (51%), Gaps = 51/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R+ F + S + +YVCG TVYD +H+G+AR + FD++ R LR+ E
Sbjct: 1 MLHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + +T + D + L P +P
Sbjct: 61 --VNYVRNITDIDDKIIQRANENG------ETTRALTERTIAMMHDDFAAINLLEPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T H+P++I +I+ +I GHAY+ + +++FD SS +YG S++ +++ MG+RV
Sbjct: 113 RVTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYSDYGKLSKQDLEQLNMGSRVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK P EP W SPWG GRPGWHIECSAM+ +LG+ FDIHGGG DLIF
Sbjct: 173 SDKDDPMDFVLWKTVKPGEPSWSSPWGEGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N W+H G + ++ KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEVAQSCCAYDT-PYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVL-------KQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
A +R ++ HYR + ++ +T+A L + G
Sbjct: 285 DAETLRYFLMSAHYRSQLSYSEDNITQARSALERLYTALRDVNANIQVDMQSGDYLARFD 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNASAHILGIEVCKEHL 401
A+ +D NT A+ L +A+E K DL I +LGI
Sbjct: 345 KAMDDDFNTPEAMAVLFDVAKELNKAKAEEQSGHSRASDLAGILLNLGKVLGILQRSPSE 404
Query: 402 -------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + IE L++ R K + +AD R L ILED G
Sbjct: 405 YLQGDQQDADEVAEIEALIKARNDARAAKDWPAADAARDGLNVLNIILED------GPSG 458
Query: 455 TRWKQ 459
T W++
Sbjct: 459 TTWRK 463
>gi|217976332|ref|YP_002360479.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
gi|254781685|sp|B8EMY2|SYC_METSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|217501708|gb|ACK49117.1| cysteinyl-tRNA synthetase [Methylocella silvestris BL2]
Length = 449
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 218/461 (47%), Positives = 291/461 (63%), Gaps = 14/461 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ YNTL R+ F IDP+++R+Y CGPTVYD HIGN R +IVFD+L+RLLR+ YG
Sbjct: 1 MSLRFYNTLTRQKEAFTPIDPADVRVYACGPTVYDHLHIGNGRMLIVFDLLFRLLRHVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRNITD+DDKI RA + I ++T + T F +D L CL PT +
Sbjct: 61 KDHVRYVRNITDVDDKINARAAERGVD------IRVLTDEMTAIFHEDAAGLGCLPPTVE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +MI +IQ +I G AY A ++FD ++P+YG+ S+R +D+ G RV
Sbjct: 115 PRATEHMAEMIAIIQKLIDKGAAYIAEGHVLFDVPAMPDYGALSKRPLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+ P DF+LWK + P EPGWESPWGRGRPGWHIECSAMS +LG+VFDIHGGG+DL+F
Sbjct: 175 PYKRGPMDFVLWKPAAPSEPGWESPWGRGRPGWHIECSAMSWRHLGEVFDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ CA A++W+HNG L +EG KMSKS GNF+TI+ELL + FGGR W
Sbjct: 235 PHHENEIAQTRCAFGHSVMAHVWMHNGHLQVEGEKMSKSLGNFVTIHELLNSDSFGGRKW 294
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLN 360
P V+RLAML THYR+PIDFTV+ L EAE LS+W + D + AL +DLN
Sbjct: 295 PGAVLRLAMLRTHYRQPIDFTVKALEEAERTLSEWRHAAEGAEPEAPDANFIDALSDDLN 354
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
T AI LH L + L + + + + L ++ I L+ ER
Sbjct: 355 TPRAISELHAL-KAKRPGALLGGLALLGVDLADLGEEERALPRSAFEQIMALIAEREAAR 413
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
+ K ++ +D +R +L + G +L+D K T W+ KP
Sbjct: 414 QHKNWAESDRLRDKLAAMGVVLKDNKGGA-----TSWELKP 449
>gi|209548641|ref|YP_002280558.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|226710847|sp|B5ZWB3|SYC_RHILW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|209534397|gb|ACI54332.1| cysteinyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 463
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 266/459 (57%), Positives = 338/459 (73%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++K+YNTL R+ T F IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 4 MPELKLYNTLTREETVFAPIDPDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
GE VTY RNITD+DDKI RA ++HP +P+N AI +T + QF D L CL P+
Sbjct: 64 GEDHVTYARNITDVDDKINARALRDHPGLPLNQAIRAVTERTETQFHADVAELGCLEPSV 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT++I +M +I+ +I +GHAY A E++FDT S+ +YG S+R +DEQ+ G R+
Sbjct: 124 EPRATDNIVEMTEIIEKLIGNGHAYVAAGEVLFDTKSMADYGQLSKRPLDEQQAGARIAV 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
HKKN DF+LWK S+ EPGWESPWGRGRPGWHIECSAMS YLG VFDIHGGGLDLI
Sbjct: 184 DAHKKNSGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGDVFDIHGGGLDLI 243
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA E ANIW+HNGFL +EGRKMSKS GNF+TI++LL T+ FGGR
Sbjct: 244 FPHHENEIAQSRCAHGTEVMANIWMHNGFLQVEGRKMSKSEGNFVTIHDLLHTQIFGGRK 303
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
WP V+RLAMLMTHYREPIDF+++RL EAE LL+KWP T D VL+AL ++LNT
Sbjct: 304 WPGEVLRLAMLMTHYREPIDFSIKRLEEAERLLAKWPATEPGDAEPDETVLNALADNLNT 363
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
V+A+QALH LA+ + + F A+A +LG+ K +++ ++ A++ LV RL +LK
Sbjct: 364 VAAVQALHALAQAAHTDPAAGARFAATAALLGLLPKKAEIDEAVAAAVDALVAMRLEMLK 423
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K F+ AD IR +L +KG L+D K+ G+R+T W+ K
Sbjct: 424 AKNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 462
>gi|88860441|ref|ZP_01135079.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
gi|88817639|gb|EAR27456.1| cysteinyl-tRNA synthetase [Pseudoalteromonas tunicata D2]
Length = 459
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 258/478 (53%), Gaps = 46/478 (9%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IYNTL R+ +F+ + I MYVCG T+YD+ H+G+AR + FDV+ R R+ +
Sbjct: 3 QIYNTLTRQKEQFKPMVAGKISMYVCGITIYDYCHVGHARTYVSFDVMNRYFRHLGYD-- 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITD+DDKII+RA + N+ I+ +T + T+ +D L L +P
Sbjct: 61 VTYVRNITDVDDKIIKRAHEN------NEEINDLTVRMTKAMHEDFNALNMLPADIEPTV 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T HIP++I +++ +I GHAY A N +++FD S+ YG+ S++ + + G RV
Sbjct: 115 TGHIPEIITMVERLIEKGHAYIAGNGDVLFDVSTFAAYGALSQQDLSMLQAGARVEVDMG 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K +P DF+LWK++ P EP W SPWG GRPGWHIECSAMSS +LG FDIHGGG DL FPH
Sbjct: 175 KDDPLDFVLWKKAKPEEPSWGSPWGAGRPGWHIECSAMSSKHLGDHFDIHGGGSDLQFPH 234
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQSCCA +K N WIH G + + KMSKS NF T+ E+L + +
Sbjct: 235 HENEIAQSCCASG-QKYVNTWIHTGMVQVNKEKMSKSLNNFFTVREVL-------KQYDR 286
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSAL 355
+R ++ HYR ++++ + L +A L + + A+
Sbjct: 287 ETVRFFLINGHYRSQLNYSQENLDQARSSLERIYTALRGVTPTPVDLAANEYVAKFRQAM 346
Query: 356 YNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL------ 401
+D NT A+ + +LA+E K +L + A +LGI +
Sbjct: 347 NDDFNTPEALPVVFELAKEINRVKDSDSSKAAELAFVLKAITEVLGIAQQEPESFLQGNQ 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE L+ +R K ++ AD R +L + ILED T W++
Sbjct: 407 DEDEVAQIEALIAQRNQARADKNWALADDARDKLNAMNIILEDS------AGKTTWRK 458
>gi|270157070|ref|ZP_06185727.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
gi|269989095|gb|EEZ95349.1| cysteinyl-tRNA synthetase [Legionella longbeachae D-4968]
Length = 464
Score = 406 bits (1042), Expect = e-111, Method: Composition-based stats.
Identities = 179/475 (37%), Positives = 258/475 (54%), Gaps = 40/475 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L R F +I P I +YVCG TVYD HIG+AR M+ FDV+ R LR
Sbjct: 10 NMLHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y+RNITDIDDKII RA + I +T++ +DT L L P +
Sbjct: 70 D--VKYIRNITDIDDKIIARAHERAI------PIDELTAQYIAAMNEDTQALNILPPDVE 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HI +I+LI+ ++ G+AY N ++ + +S +YG S + ++ G RV
Sbjct: 122 PRATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEI 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK++ EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGGLDL
Sbjct: 182 VKEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQ 241
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + AN W+H G L + KMSKS GNF TI ++L
Sbjct: 242 FPHHENEIAQSEAAT-EKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLA-------K 293
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA-- 354
V+R +L +HYR ++++ + L A+ L++ QT + G +D ++
Sbjct: 294 HHPEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFN 353
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKN 404
+ +D NT A+ + +L+ E K++ L + +G+ + L+
Sbjct: 354 QAMNDDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDE 413
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+IE+L+ ERL + + AD IR L S+G LED G T W++
Sbjct: 414 DKASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 462
>gi|190150242|ref|YP_001968767.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|307263581|ref|ZP_07545196.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
gi|229558612|sp|B3GXR0|SYC_ACTP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189915373|gb|ACE61625.1| cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
7 str. AP76]
gi|306871224|gb|EFN02953.1| Cysteinyl-tRNA synthetase [Actinobacillus pleuropneumoniae serovar
13 str. N273]
Length = 459
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 183/480 (38%), Positives = 263/480 (54%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+ + + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINSNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NEMCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADGDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLNNLDLARSALERLYTSLRGCDLSVEVAGGEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAARLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DADNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTTWRK 458
>gi|326391118|ref|ZP_08212664.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|325992817|gb|EGD51263.1| cysteinyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 466
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 254/488 (52%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R E + ++ + MYVCGPTVY++ HIGNAR IVFD + R L Y
Sbjct: 1 MKLYNTLSRTKEELEPLNDKIVNMYVCGPTVYNYIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA++E N + K ++ KD L T P+
Sbjct: 59 KVNYVQNFTDIDDKIIKRAQEE------NVTTKEVAEKYIDEYFKDADNLGIKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AY N + F+T+ +YG S + I+E + G R+
Sbjct: 113 ATEHIEDIIEFIKILIDKGYAYVVNGNVYFETAKFKDYGKLSHKNIEELQAGARIEINEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK P EP W+SPWG+GRPGWHIECS MS+ YLGK DIH GG DL+FPH
Sbjct: 173 KKNPLDFVLWKAQKPGEPAWDSPWGKGRPGWHIECSVMSTKYLGKTLDIHAGGPDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G+LN+ KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSETAY-EQPFSKYWMHIGYLNINNEKMSKSKGNFFTVREITE-------KYNP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----------- 353
V+RL MLM HYR PI+F++ + +A + + +
Sbjct: 285 EVLRLFMLMAHYRSPINFSLDLMEQANSAYERLLNAVANLKHLANVCKDGGLNEEEKKLM 344
Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI L ++A+ S N +L +F + +
Sbjct: 345 EKFEEYKKEFEEAMDDDFNTADAISVLFEMAKTSNANLSRNSSKKLVEYILDMFLKLSEV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + + I L++ER K K + AD IR +L KG ILED
Sbjct: 405 LGLSY-RGVETELNDEEILALIEERQKARKEKNWKLADEIRDRLREKGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PEGVRWKR 465
>gi|254448716|ref|ZP_05062174.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
gi|198261724|gb|EDY86011.1| cysteinyl-tRNA synthetase [gamma proteobacterium HTCC5015]
Length = 463
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 184/484 (38%), Positives = 253/484 (52%), Gaps = 51/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R F+ I P +R+YVCG T YD+ HIG+AR M+ FD + R LR+ +
Sbjct: 1 MQIYNTLSRSKQVFEPIHPGQVRLYVCGITTYDYCHIGHARVMVAFDAITRYLRHRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKI++RA + +A +T++ +D L L P +PR
Sbjct: 60 -VTYVRNITDIDDKILKRAEENG------EAYDTLTARFIDAMHEDERALGVLPPDREPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +I LIQ +I G AY N ++ F S +YG S +K+++ G RV +
Sbjct: 113 ATQHIQDIIDLIQVLIDKGAAYTAENGDVYFSVSDFADYGKLSNKKLEDLLEGVRVELES 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + + GWE+PWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 173 SKRDPRDFALWKGAQQDQVGWEAPWGYGRPGWHIECSAMSTSCLGNHFDIHGGGPDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E AN+W+H G + ++ KMSKS GNF TI E+LE +
Sbjct: 233 HHENEIAQSEAATG-ETYANVWMHAGAVRVDNEKMSKSLGNFFTIREVLE-------KYQ 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------PAV 351
VIR +L +HYR PI+++ L +A L + + A
Sbjct: 285 PEVIRYFLLSSHYRSPINYSDNSLEQARAGLERLYTALRPYSDVAADEAALSDSSALQAF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEVCKEH------ 400
+ +D NT A+ L LAR+ + ++ +LG+
Sbjct: 345 QQVMDDDFNTREALSVLFDLARQLNQQEGEAARNIAVQLKTLGRVLGLLEGDAQAYLKSG 404
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
I+ L+ ER+ + K F+ AD IR QL G LED G T
Sbjct: 405 GLVSDAGSLSDDDIDALIAERIEAKQNKDFARADDIRDQLTEAGIQLED------GPAGT 458
Query: 456 RWKQ 459
+W++
Sbjct: 459 QWRR 462
>gi|28897924|ref|NP_797529.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260364387|ref|ZP_05777025.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|260877081|ref|ZP_05889436.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260895742|ref|ZP_05904238.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|31076996|sp|Q87QJ9|SYC_VIBPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|28806138|dbj|BAC59413.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|308088338|gb|EFO38033.1| cysteine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093754|gb|EFO43449.1| cysteine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308115166|gb|EFO52706.1| cysteine--tRNA ligase [Vibrio parahaemolyticus K5030]
gi|328473118|gb|EGF43966.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 460
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 178/482 (36%), Positives = 251/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCESLTERLIGDMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFDEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSTILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTK-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTESVEKASELGALMRELADVIGILYQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 NAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|84391753|ref|ZP_00991655.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
gi|84376466|gb|EAP93345.1| cysteinyl-tRNA synthetase [Vibrio splendidus 12B01]
Length = 461
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 177/483 (36%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--NFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I +++ L++ +I G AY +N +++F+ YG S++ +D+ + G RV
Sbjct: 113 RATEFITEIVELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFST 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L ++ARE K L + A I+GI
Sbjct: 345 AMNDDFNTPEAYSVLFEMAREINRIKTESVEKASALGALMRELADIIGILHQDPEAFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L++ R K +++AD R +L G +LED G T W
Sbjct: 405 DAAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|166031083|ref|ZP_02233912.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
27755]
gi|166028930|gb|EDR47687.1| hypothetical protein DORFOR_00765 [Dorea formicigenerans ATCC
27755]
Length = 468
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 184/485 (37%), Positives = 254/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ +K EF ++ +RMYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIYNTMSKKKEEFIPLEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E + I+ + ++ KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIAKANEEGVTAE------EISQRYIEECKKDMAGMNVKPATTNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI LIQ ++ G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATQEIDGMIQLIQTLMDKGYAYEKNGTVYYRTRQFKEYGKLSHKNLDDLRSGERSLLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK EP W+SPW GRPGWH ECS MS YLG+ DIH GG DL+
Sbjct: 173 ADEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHTECSEMSKKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ + AN W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANG-KTFANYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SEQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ V+R ML HYR P++F+ + + A+ L + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSSLERIVNAVDNLNFLIKNAKDEPMTAEEA 344
Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT A+ A+ +L R S N D + +
Sbjct: 345 ELFAQTDSFVKAFEDAMDDDFNTADAVAAIFELVRYSNTNADAEKTKEYLGKIKDLIVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
A +LG+ V E + ++ IEKL++ER K K F+ AD IR +L KG IL+D +
Sbjct: 405 ADVLGLIV--EKKEEILAEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VQWKR 467
>gi|301059000|ref|ZP_07199966.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446881|gb|EFK10680.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 484
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 180/503 (35%), Positives = 253/503 (50%), Gaps = 69/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YN+ RK F+ ++ + +YVCG TVYD HIG+AR IVFDVL R R
Sbjct: 1 MPLKLYNSSIRKKEVFKPLNDGKVGLYVCGVTVYDLCHIGHARSTIVFDVLARYFRARGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TDIDDKIIERA+ + A + + F +D +L L +
Sbjct: 61 D--VTYVRNFTDIDDKIIERAK------LLKKAPKELAREFIDAFYEDMGKLGVLKADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+++ MI + Q ++ G+AY ++ F S P YGS S R +++ + G+RV
Sbjct: 113 PRATDYVEDMIEMTQTLMDRGYAYTEGGDVYFSVDSYPGYGSLSGRNLEDMRAGSRVAVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWH+ECS MS+ +LG FDIHGGG DL+F
Sbjct: 173 DRKRHPMDFVLWKSAKPGEPQWPSPWGPGRPGWHLECSVMSNRHLGPTFDIHGGGRDLLF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS CA+ E A W+HNGF+ +E KMSKS GNF+TI + L + +
Sbjct: 233 PHHENERAQSMCANDGE-FARYWVHNGFVTVESEKMSKSLGNFLTIRDAL-------KKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+RL +L HYR P+DF+ + + + L + +
Sbjct: 285 HPEVLRLFLLSKHYRSPLDFSAKDVANLQSGLVRIYRMLQRLNDLLGPGDGEKTSEDSLS 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------------LLPI 384
G + +DLNT A+ + RE + D
Sbjct: 345 GASGEFYEKFCEMMDDDLNTAGALGLVFDKVREMNRLMDPDGNGAVSEKALSSLKSQRDQ 404
Query: 385 FNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+ E + IE LV++R K ++ +D IR QL
Sbjct: 405 LLRAGEILGLFQQNPAEFFEQLASPSKDVNTDEIEALVKKRSQARVAKDWALSDTIRDQL 464
Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
+ G +LED G + T W+
Sbjct: 465 KEMGVVLED------GPQGTTWR 481
>gi|254785975|ref|YP_003073404.1| cysteinyl-tRNA synthetase [Teredinibacter turnerae T7901]
gi|259511843|sp|C5BI15|SYC_TERTT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|237685828|gb|ACR13092.1| cysteine--tRNA ligase [Teredinibacter turnerae T7901]
Length = 458
Score = 405 bits (1041), Expect = e-111, Method: Composition-based stats.
Identities = 196/478 (41%), Positives = 272/478 (56%), Gaps = 42/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT R+ +F +DP+ I+MYVCGPTVY+ HIGNARP++VFD L+R+L+Y Y
Sbjct: 1 MSLRIYNTATRQKEDFVPVDPAAIKMYVCGPTVYNLVHIGNARPVVVFDTLFRVLQYLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI++ A + + IS + ++ ++ +D +L L PT
Sbjct: 60 -DNVIYARNITDIDDKIMKAAAENG------EPISALAARYAAEYERDMAQLNALQPTIV 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+ QMI + Q ++ GHAY A+ ++FD S+ +YG S R +++ G RV
Sbjct: 113 PYATEHLEQMIAMTQALVNKGHAYAADGHVLFDVQSMGDYGELSNRSLEDMLDGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK DF+LWK S EPGWESPWGRGRPGWH+ECSAM +LG DIHGGG DLIF
Sbjct: 173 PYKKYAGDFVLWKPSADAEPGWESPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS CA E+ W+HNG++N++G KMSKS GNF T+ ELLE+ +
Sbjct: 233 PHHENERAQSQCAHDGEQYVKYWMHNGYINIDGEKMSKSLGNFRTVRELLES-------F 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
P VIR A+L YR +DF+ + L +++ L +
Sbjct: 286 PGEVIRFALLSAQYRSELDFSAELLEQSKASLDSLYGALRKTEEEILPAGPALAASPGFA 345
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-------DLLPIFNASAHILGIEVCKEHL----- 401
AL +DLNT AI LH+LAR K + A A+++G+
Sbjct: 346 ALMDDLNTPLAISELHQLARTVHKAEPESEEAQSAKGMMLALANLMGLLQEDPETWFQGG 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+ ER K+++ AD IR++L++KG +LED + T WK+
Sbjct: 406 AEQDVSWIEALIAERQQAKLDKQYARADEIREELKAKGILLEDSR------EGTTWKK 457
>gi|302390630|ref|YP_003826451.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302201258|gb|ADL08828.1| cysteinyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 465
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 174/488 (35%), Positives = 252/488 (51%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ EF ++ + + +Y CGPTVYDF H+GNAR I FDV+ L+Y E
Sbjct: 1 MRIYNTLTRRKEEFIPLNGNKVTIYTCGPTVYDFFHVGNARVFITFDVIRNYLKYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I+RA +E ++ + + +++ KD L PR
Sbjct: 60 -VKFVQNFTDIDDKMIKRANEEGVTV------KELGDRFIKEYFKDADALNIKRADVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I G+AYE ++ F P YG S + ++E + G RV
Sbjct: 113 ATEHIEDIIEFIKVLIEKGYAYEVGGDVYFAARKFPGYGKLSGQNLEELEAGARVEPGEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK P EP W SPWG GRPGWHIECSAM+ +LG+ DIHGGG DLIFPH
Sbjct: 173 KKDPIDFALWKAKKPGEPSWPSPWGEGRPGWHIECSAMAMKHLGETIDIHGGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS + A ++H G+LN+ KMSKS GNF T+ ++L + +
Sbjct: 233 HENEVAQSEAFTG-KPFARFFMHVGYLNINNEKMSKSLGNFFTVRDIL-------KEYNP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
V+R ML +HYR PI+F+ + L +++ L + + ++
Sbjct: 285 EVLRFLMLSSHYRSPINFSRELLDQSKSALERLYNALYAMEHLENAAPERPLNGEEEEYL 344
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
A+ +D NT AI L + RE + + + +
Sbjct: 345 RRQLENKNKFKDAMDDDFNTAGAIAVLFDMIREFNVSLNENSSREAVKKTKEMVLELGGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG E + + IE+ ++ER K K ++ AD IR +L ++G ILED
Sbjct: 405 LGFFSKFEPV--LLDEEIEQKIKEREEARKAKNYALADKIRDELRARGIILEDT------ 456
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 457 PAGVRWKR 464
>gi|167629446|ref|YP_001679945.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|229558718|sp|B0TC35|SYC_HELMI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|167592186|gb|ABZ83934.1| cysteinyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 481
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 176/501 (35%), Positives = 251/501 (50%), Gaps = 65/501 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL R+ F + MYVCGPT YD+ H+GNARP++VFD + R L +
Sbjct: 1 MSLRVYNTLSREKETFVPHKAGRVGMYVCGPTTYDYIHLGNARPLVVFDTIRRYLEHVGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKII RA++ + + ++ +++ +D L T
Sbjct: 61 E--VVYIQNFTDIDDKIIHRAKEIG------EDPIAMAARFVEEYYRDAKALNVRPATIH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ + H+ ++I +I ++ GHAYE ++ F S +YG S R +++ + G RV
Sbjct: 113 PKVSAHMAEIIAMIGVLVEKGHAYELGGDVYFSIPSFKDYGKLSGRSLEDLQAGARVDVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGG DLIF
Sbjct: 173 ERKRHPMDFALWKGAKPGEPSWDSPWGKGRPGWHIECSAMSRKYLGDAFDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A W+HNGF+ + KMSKS GNF T+ E+L + +
Sbjct: 233 PHHENEIAQSEACTGTSPMARYWLHNGFITVNQEKMSKSLGNFFTLREIL-------KRF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
P VIR +L THYR PIDF +L A+ L + +
Sbjct: 286 PGDVIRFYLLSTHYRSPIDFDDSKLEAAQKGLQRLRTSRRLIEEALAASGKEGAERPAGQ 345
Query: 347 ----------IDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDL 381
A+ +D NT A+ L LARE+ +
Sbjct: 346 REKLEEQWLAAKKGFREAMDDDFNTALALSMLFDLAREANTFLHGGFALTPEDRQLLLQV 405
Query: 382 LPIFNASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
F A +LGI++ + + + L+ R K K +++AD IR L+
Sbjct: 406 AETFEELAGVLGIDLAGGAAAADDNTVDGLMNLLIGIRAEARKKKDWATADRIRDGLKEL 465
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G ++ED + RWK+
Sbjct: 466 GIVIEDT------PQGARWKK 480
>gi|209695403|ref|YP_002263332.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
gi|226710839|sp|B6EH43|SYC_ALISL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|208009355|emb|CAQ79625.1| cysteinyl-tRNA synthetase [Aliivibrio salmonicida LFI1238]
Length = 462
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 172/484 (35%), Positives = 258/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LR+ +
Sbjct: 1 MLKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + N++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAEN------NESCEALTERLIAEMHADFDALKMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I +++ L++ +I G AY +N +++F+ YG SR+ +++ + G+RV +
Sbjct: 113 RATEYITEIVELVERLIERGFAYVASNGDVMFEVKKFDEYGRLSRQDLEQLQAGSRVTLE 172
Query: 183 YH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++ DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL
Sbjct: 173 ETSVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 233 MFPHHENEIAQSCCAHDAK-YVNTWMHSGMVMIDREKMSKSLGNFFTIRDVLA------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAV 351
+ + +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 HYDSETVRYFLMSGHYRSQLNYSEENLNQARSSLERLYTSLRGLDLTVTPAGGETFVTRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL-- 401
+A+ +D NT A L ++ARE + L + A +LG+ +
Sbjct: 345 STAMNDDFNTPEAYSVLFEMAREVNRLKTENIEAASKLGALMRELAEVLGLLSQEPEAFL 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ N IE L++ R K +S+AD R + + +LED G T
Sbjct: 405 QGDSGSDNEVAEIEALIKARNDARAAKDWSAADAARDAITALNIVLED------GPEGTT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|156974130|ref|YP_001445037.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|156525724|gb|ABU70810.1| hypothetical protein VIBHAR_01842 [Vibrio harveyi ATCC BAA-1116]
Length = 460
Score = 405 bits (1040), Expect = e-111, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +++ + G RV +
Sbjct: 113 RATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLEQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRYTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|292898782|ref|YP_003538151.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
gi|291198630|emb|CBJ45738.1| cysteinyl-tRNA synthetase [Erwinia amylovora ATCC 49946]
Length = 462
Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats.
Identities = 186/484 (38%), Positives = 252/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R FDV+ R LRY +
Sbjct: 1 MLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITDIDDKII+RA + ++I +T + + KD L L P +P
Sbjct: 61 L--NYVRNITDIDDKIIKRAHENG------ESIEQLTQRMIGEMHKDFAALNILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-E 181
RAT HI ++I L++ +I HAY +N +++F S YGS SR+ +D+ + G RV
Sbjct: 113 RATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEVT 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+
Sbjct: 173 ADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A N W+H+G + ++ KMSKS NF T+ ++LE
Sbjct: 233 FPHHENEIAQSTSAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE-------H 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 285 YDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH---- 400
+A+ +D NT A AL LARE + L +LG+
Sbjct: 345 AAMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFLQ 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+N IE L+Q R+ K K ++ AD R +L G +LED G TR
Sbjct: 405 SGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGTR 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|91226019|ref|ZP_01260946.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269968727|ref|ZP_06182720.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|91189460|gb|EAS75737.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|269826654|gb|EEZ80995.1| cysteinyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 460
Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats.
Identities = 178/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|332289654|ref|YP_004420506.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
gi|330432550|gb|AEC17609.1| cysteinyl-tRNA synthetase [Gallibacterium anatis UMN179]
Length = 459
Score = 405 bits (1040), Expect = e-110, Method: Composition-based stats.
Identities = 183/480 (38%), Positives = 257/480 (53%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL+R+ F I P+ + MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLKREKEIFTPIHPNQVGMYVCGVTVYDLCHIGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITD+DDKII+RA + H + + + + KD L P +P
Sbjct: 60 -HLTYVRNITDVDDKIIKRALENH------ETCEHLVDRMVAEMYKDFDALNIQRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I L+Q +I +GHAY N +++FD S P YG SR+ + + + G RV
Sbjct: 113 RATHHIPEIIALVQRLIDNGHAYVAQNGDVMFDVDSFPEYGKLSRQDLSQLQAGARVEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 DIKKNPMDFVLWKMSKENEPSWQSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHGGA-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR ++++ + L A L + A +
Sbjct: 285 DAESVRYFLLTAHYRSQLNYSEENLKLAHSALERLYTALRGTDANATAAGGEQFIEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A+ L +ARE K A +LG+
Sbjct: 345 AMDDDFNTPGALSVLFDMARELNKLKAEQNPQTDAFAARLRELAGVLGLLYQDPETFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + + IE L+ +R K +++AD R +L + G ++ED G T W++
Sbjct: 405 GMDDDETKIIETLIAQRNQARANKDWATADAARDKLAAMGVVIED------GANGTTWRK 458
>gi|292487539|ref|YP_003530411.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
gi|291552958|emb|CBA20003.1| cysteine tRNA synthetase [Erwinia amylovora CFBP1430]
Length = 502
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 186/485 (38%), Positives = 252/485 (51%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R FDV+ R LRY
Sbjct: 40 SMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGY 99
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YVRNITDIDDKII+RA + ++I +T + + KD L L P +
Sbjct: 100 QL--NYVRNITDIDDKIIKRAHENG------ESIEQLTQRMIGEMHKDFAALNILPPDLE 151
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
PRAT HI ++I L++ +I HAY +N +++F S YGS SR+ +D+ + G RV
Sbjct: 152 PRATRHIAEIIELVEKLIAREHAYVASNGDVMFSVDSDLQYGSLSRQDLDQLQAGARVEV 211
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 212 TADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDL 271
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS A N W+H+G + ++ KMSKS NF T+ ++LE
Sbjct: 272 MFPHHENEIAQSTSAHD-GPYVNYWMHSGMVMVDREKMSKSLNNFFTVRDVLE------- 323
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 324 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFEARF 383
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH--- 400
+A+ +D NT A AL LARE + L +LG+
Sbjct: 384 RAAMDDDFNTPEAYSALFDLAREVNRMKAENPAAVDGLAARLRVLGGVLGLLEQDPEQFL 443
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+N IE L+Q R+ K K ++ AD R +L G +LED G T
Sbjct: 444 QSGANVNDEEVAQIEALIQMRIDARKEKNWAQADVARDRLNEMGIVLED------GAGGT 497
Query: 456 RWKQK 460
RW++K
Sbjct: 498 RWRRK 502
>gi|163751990|ref|ZP_02159201.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
gi|161328148|gb|EDP99315.1| cysteinyl-tRNA synthetase [Shewanella benthica KT99]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 255/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ EF+ + P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKLYNSLTRQKEEFKPLQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRAAEN------NESCKSLTERLIGEMHRDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P++I +++ +I +AY N +++F SS YG S + I++ + G RV +
Sbjct: 113 RATQHMPEIIDMVEKLIEKEYAYVSDNGDVLFSVSSFAEYGRLSGQNIEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL F
Sbjct: 173 DTKRDPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVL-------KHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A IR +L HYR ++++ L +A+ L + + +
Sbjct: 285 DAGTIRYFLLSGHYRSQLNYSEDNLKQAKSALDRLYTSLKGLDLNVEPADASEFVVKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKE 399
A+ +D NT A L + RE K DL A +LG+ K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRVKGSDLAQASAMGVKLKELAGVLGLLDQDVDIFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGSDDEVAQIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|312880084|ref|ZP_07739884.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783375|gb|EFQ23773.1| cysteinyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 467
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 186/486 (38%), Positives = 249/486 (51%), Gaps = 57/486 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN L R+ F +P +R YVCGPTVYDF HIGNARP IVFDVL R L + V
Sbjct: 5 VYNDLTRRKEVFVPQNPGEVRFYVCGPTVYDFFHIGNARPFIVFDVLRRYLEHQGY--TV 62
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYV+N TD+DDK+I RA + S+P + + + +D L T PRAT
Sbjct: 63 TYVQNFTDVDDKMIRRAAELGISVP------ELAERFIAAYFEDADALGVRRATVHPRAT 116
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
IP ++ LIQ I+ GHAY ++ FD S P YG S++ ++E + G RV K+
Sbjct: 117 EEIPAILELIQAILDRGHAYAVEGDVYFDVKSYPAYGVLSKQSLEELQSGARVEVDPRKR 176
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+P DF LWK P EP W+SPWG GRPGWH+ECSAMS +LG+ D HGGG DLIFPHHE
Sbjct: 177 HPLDFALWKAQKPGEPAWKSPWGMGRPGWHVECSAMSRRHLGETLDFHGGGCDLIFPHHE 236
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
NEIAQS A + W+HNG+L ++ KMSKS GNF+T E + +P
Sbjct: 237 NEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFLTARE-------ARKRFPPLA 288
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------------- 345
IRL ML HYR PI+F+ + L +A + T
Sbjct: 289 IRLFMLSAHYRSPINFSEEGLMQATAAQERLRNGWTELEFALGHRSASAEPDGALRRMLR 348
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
L+AL +DLNT AI + + + + F ILG
Sbjct: 349 EGRERFLAALDDDLNTAGAIGVVFDVVKGVNSSLGERPDADLEALGQAKTFFLEVEDILG 408
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
I +++ +++L+QER K + F+ AD IR +L ++G +LED
Sbjct: 409 ILGVAPE--ESLEEDVDRLIQERQAARKGRDFARADAIRDELLARGILLEDTPQGP---- 462
Query: 454 MTRWKQ 459
RWK+
Sbjct: 463 --RWKR 466
>gi|251793189|ref|YP_003007917.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
gi|247534584|gb|ACS97830.1| cysteinyl-tRNA synthetase [Aggregatibacter aphrophilus NJ8700]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 182/481 (37%), Positives = 258/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NTL R+ F+ I I MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++ +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEITAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGNQ-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR ++++ + L A L + A
Sbjct: 285 DAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDAFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEIARELNKLKTQDMAKANGLAARLRELAAILGLLQLDPEQFLQA 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE L+++R K + +AD R L G +LED N T W++
Sbjct: 405 SSDEDEVAKIEALIKQRNEARVAKDWPAADAARNALTQMGIVLEDGPN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|260887698|ref|ZP_05898961.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
gi|330838629|ref|YP_004413209.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
gi|260862578|gb|EEX77078.1| cysteine--tRNA ligase [Selenomonas sputigena ATCC 35185]
gi|329746393|gb|AEB99749.1| cysteinyl-tRNA synthetase [Selenomonas sputigena ATCC 35185]
Length = 476
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 251/496 (50%), Gaps = 61/496 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL R+ EF+ ++P +Y CG T Y+ HIGNARP + +DV+ R L
Sbjct: 1 MLRVYNTLTREKEEFKPLEPGKASIYCCGVTPYNDPHIGNARPFVTWDVVRRYLEKKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKII RA++ + + ++ K L P
Sbjct: 60 -AVHYVQNFTDIDDKIIRRAKEAG------ETWKELADHYIAEYFKAIDALNVRRADAYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + HI ++ +I+ +I G+AY + ++ + YG S R +D+ + G RV
Sbjct: 113 RVSEHIADVLAVIEKLIEKGYAYALDGDVYYSVERFAGYGKLSGRSLDDMQAGARVGVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS YLG+ FD HGGG DLIFP
Sbjct: 173 RKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSMKYLGETFDFHGGGSDLIFP 232
Query: 244 HHENEIAQSCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
HHENEIAQ+ A W+HNGF+ + KMSKS NF T+ ++LE +
Sbjct: 233 HHENEIAQAQACTGDDHSFARYWLHNGFITIHDEKMSKSKNNFFTVKDILE-------KY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
V+R ++ THYR P+DFT +RL EA+ L++ + + +
Sbjct: 286 AGEVVRFFIVQTHYRSPLDFTDERLVEAKTSLARLKNSWDNAAELSSRKDESSGSAKSLL 345
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
A A+ +D NT AI L L++E ++ + ++
Sbjct: 346 AAAMEAKAAFYEAMDDDFNTALAISHLFSLSKEINIYYNEVTTGAAAFDAANFAKVRAVY 405
Query: 386 NASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
A ++GI KE + + +E L+ R + K ++ AD++R +L+++G ++E
Sbjct: 406 AEMAEVIGIFEAKEEKAADGLVDSLMELLLNLRQKAREEKNWALADHLRDELKARGVVIE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGARWKR 475
>gi|323144957|ref|ZP_08079517.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
gi|322415236|gb|EFY06010.1| cysteine--tRNA ligase [Succinatimonas hippei YIT 12066]
Length = 470
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 254/480 (52%), Gaps = 44/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+NT+ RK EF+ I+ I MYVCG TVYD HIG+AR + FD++ R LRY
Sbjct: 13 PMLQIHNTISRKKEEFKPINEGQIGMYVCGVTVYDLCHIGHARTFVNFDMVVRYLRYRGY 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+RNITDIDDKII+RA + S + + KD L + P +
Sbjct: 73 --KVRYIRNITDIDDKIIKRAHERKVSA------KELAENFIVEMHKDFDALNIMRPDEE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT IP++I L+Q +I +G+AY N +++F + YG S + ++E + G R+
Sbjct: 125 PRATETIPEIIALVQRLIDNGNAYVADNGDVMFAIDTFKQYGRLSGQNLEELEAGARIEI 184
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ YLG+ FDIHGGG DLI
Sbjct: 185 EKTKRNPFDFVLWKMSKPGEPSWSSPWGDGRPGWHIECSAMNLKYLGENFDIHGGGSDLI 244
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA + N W+H+G + + KMSKS NF TI ++LE
Sbjct: 245 FPHHENEIAQSCCACHSK-YVNYWMHSGMVMINHEKMSKSLNNFFTIRDVLE-------H 296
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLS 353
+ A IR +L YR P+++T + L +A+ L++ +
Sbjct: 297 YDAETIRFFLLSAQYRSPLNYTQENLDKAKASLARLYTALRDVVPVKAEGEDEYTKRFKE 356
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGIEVCK--------EH 400
+ +D NT A+ L LA+ K L +LGI E
Sbjct: 357 LMDDDFNTPGAMAVLFDLAKAVNKEEGETKAKLAGRLVELGSVLGILYQNPSSFLKGAES 416
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + IE L+QER K F +AD R +L + G +LED G T W++K
Sbjct: 417 SDNDEVSVIEALIQERKDARARKDFKAADAARDKLTAMGIVLED------GPSGTTWRRK 470
>gi|289164517|ref|YP_003454655.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
gi|288857690|emb|CBJ11533.1| cysteine tRNA synthetase [Legionella longbeachae NSW150]
Length = 454
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 179/474 (37%), Positives = 258/474 (54%), Gaps = 40/474 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YN+L R F +I P I +YVCG TVYD HIG+AR M+ FDV+ R LR +
Sbjct: 1 MLHLYNSLTRTKEPFVSISPGKIGIYVCGITVYDRCHIGHARSMVAFDVIVRYLRSQGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+RNITDIDDKII RA + I +T++ +DT L L P +P
Sbjct: 61 --VKYIRNITDIDDKIIARAHERAI------PIDELTAQYIAAMNEDTQALNILPPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI +I+LI+ ++ G+AY N ++ + +S +YG S + ++ G RV
Sbjct: 113 RATDHIHSIIHLIERLLAKGNAYLSDNGDVCYQVNSFADYGKLSNKDLEGLMAGARVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK++ EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGGLDL F
Sbjct: 173 KEKRSPLDFVLWKKAKQGEPSWPSPWGEGRPGWHIECSAMAMSELGEQFDIHGGGLDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G L + KMSKS GNF TI ++L
Sbjct: 233 PHHENEIAQSEAAT-EKPFANYWLHVGMLQVNNEKMSKSLGNFFTIADVLA-------KH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA--- 354
V+R +L +HYR ++++ + L A+ L++ QT + G +D ++
Sbjct: 285 HPEVVRYFLLSSHYRSSLNYSEENLANAKKALTRLYQTIKDSRFIADGELDNHWINEFNQ 344
Query: 355 -LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LNKNI 405
+ +D NT A+ + +L+ E K++ L + +G+ + L+
Sbjct: 345 AMNDDFNTPVALSVMFQLSHEVNKSNSPILAATLKYLGNTMGLLLTDPSSFLQSGLDDED 404
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+IE+L+ ERL + + AD IR L S+G LED G T W++
Sbjct: 405 KASIEQLINERLQARTERNWERADQIRADLLSRGIELED------GANGTTWRK 452
>gi|325661900|ref|ZP_08150521.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
gi|325471878|gb|EGC75095.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 4_1_37FAA]
Length = 468
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 188/486 (38%), Positives = 255/486 (52%), Gaps = 54/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL +K EF ++ +RMYVCGPTVY+F HIGNARPMIVFD + R Y E
Sbjct: 1 MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +EH S I+ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAIEEHVSAE------EISQRYIAECKKDMEGMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I +I G+AYE N + F T YG S + +D+ + G R V
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W+SPW GRPGWHIECS MS YLG DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+ E
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ V+R ML HYR P++F+ + + ++ L + + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344
Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT AI A+ +L + + D LL
Sbjct: 345 AQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LGI V KE + ++ IE L++ER K K F AD IR +L KG ILED +
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILEDTREG 462
Query: 449 DNGQRM 454
+R+
Sbjct: 463 VKWKRV 468
>gi|255282796|ref|ZP_05347351.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
gi|255266570|gb|EET59775.1| cysteine--tRNA ligase [Bryantella formatexigens DSM 14469]
Length = 469
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 184/486 (37%), Positives = 254/486 (52%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL +K EF + P + MYVCGPTVY+F HIGNARPMIVFD + R + + E
Sbjct: 1 MKIYNTLSKKKEEFVPLVPGKVSMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEHKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A++E + I+ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAQEEGVTA------DEISQRYIAECKKDMEGMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I MI +I +I G+AY A+ + F T YG S + +D+ + G R V
Sbjct: 113 ATQEIDGMIEMISTLIEKGYAYPAADGTVYFRTRKFKEYGKLSHKNLDDLRGGNRSLLVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW +GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEEQKEDPLDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS C + + A W+HNGFLN++ RKMSKS GNF T+ E+
Sbjct: 233 IFPHHENEIAQSECCNG-KIFARYWMHNGFLNIDNRKMSKSLGNFFTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ V+R ML HYR P++F+ + + A L++
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEAAGNGLNRIVNAVENLKFLAGNASQETLTEPE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
+T + + A+ +D NT AI A+ +L + + N +
Sbjct: 345 AETQKALAEYEKKFDDAMDDDFNTADAISAIFELVKFANTNVTEDSSKALAEAVKDKIVE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ ILG+ V E + + IE L++ER K K F+ AD IR L KG IL+D +
Sbjct: 405 LSDILGLIV--EKKEEMLDAEIEALIEERQAARKAKNFARADEIRDILLGKGIILKDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|167624689|ref|YP_001674983.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
gi|189082075|sp|B0TLV2|SYC_SHEHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|167354711|gb|ABZ77324.1| cysteinyl-tRNA synthetase [Shewanella halifaxensis HAW-EB4]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 178/481 (37%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ +F + P + MYVCG T+YD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + KD L P ++P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIAEMHKDFDSLNMARPDNEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I HAY ++ +++F SS P YG S + +++ + G RV +
Sbjct: 113 RATQHIPEIIDMVERLIERDHAYVASSGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DTKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ L +A+ L + +
Sbjct: 285 DAATVRYFLLSGHYRSQLNYSEDNLKQAKAALERIYTALKDLDLSVEAAPAQEFVAKFKT 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + RE K L A +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKELADVLGILGQDVDTFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|330972601|gb|EGH72667.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 460
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 178/479 (37%), Positives = 258/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H G R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHPGYGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIEAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSA 354
V+R ++ +HYR I+++ L E++ L ++ + +P +A
Sbjct: 285 HPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------- 399
+ +D T A L ++ RE + + L A +LG+ +
Sbjct: 345 MNDDFGTPEACAVLFEMVREINRLRESDIAAAACLAARLKQLASVLGVLQLEADDFLRAG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + +E L+Q RL K ++ +D IR ++ + G +LED K T W+
Sbjct: 405 AEGRVDAAEVEALIQARLAARAAKDWAESDRIRDRITAMGVLLEDGK------GGTTWR 457
>gi|312885230|ref|ZP_07744908.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
gi|309367089|gb|EFP94663.1| cysteinyl-tRNA synthetase [Vibrio caribbenthicus ATCC BAA-2122]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I+ I MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPINAGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII RA + N++ +T + + +D L P +P
Sbjct: 61 L--TFVRNITDIDDKIITRANEN------NESCEALTERLIGEMHRDFDALNMKRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT +I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 KATEYIQEIIQLVEKLIERGFAYVADNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+ +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DSETVRYFLMSGHYRSQLNYSEENLNQARAGLERLYTSLRGLDLTVPAADGEEYVSRFTE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRVKATDNEHASALGSLLRELADVIGILHQDPEAFLQG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+K+ IE L++ R K +++AD R +L + G +LED G T W++
Sbjct: 405 SDDKDQVAEIEALIKLRNDSRAAKDWATADVARDKLTAMGIVLED------GPSGTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|294141771|ref|YP_003557749.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
gi|293328240|dbj|BAJ02971.1| cysteinyl-tRNA synthetase [Shewanella violacea DSS12]
Length = 459
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 256/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKLYNSLTRQKEEFKPIQPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + ++ +T + + +D L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRAAENK------ESCESLTERLIGEMHRDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P++I +++ +I HAY + N +++F SS P YG S + I++ + G RV +
Sbjct: 113 RATLHMPEIIDMVEKLIEKDHAYVSGNGDVLFSVSSFPEYGRLSGQNIEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG+ FDIHGGG DL F
Sbjct: 173 DTKRDPMDFVLWKMSKPGEPTWDSPWGAGRPGWHIECSAMNSKHLGQHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-SYVNYWMHTGMVMIDKEKMSKSLNNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR +L HYR ++++ L +A+ L + + +
Sbjct: 285 DAGTIRYFLLSGHYRSQLNYSEDNLKQAKSALERLYTSLKGLDLSVESADASEFVAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKE 399
A+ +D NT A L ++ RE K D+ A +LG+ K
Sbjct: 345 AMDDDFNTPEAYSVLFEMVREINRVKGSDIAAASALGVKLKELAEVLGLLEQDVDTFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGSDDEVAQIEALIVERNRARAEKDWPAADIARDGLNALGVILED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|160933144|ref|ZP_02080533.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
gi|156868218|gb|EDO61590.1| hypothetical protein CLOLEP_01987 [Clostridium leptum DSM 753]
Length = 470
Score = 404 bits (1039), Expect = e-110, Method: Composition-based stats.
Identities = 180/485 (37%), Positives = 256/485 (52%), Gaps = 51/485 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF I P ++Y CGPTVY+F HIGNARPM VFD+L R L Y
Sbjct: 1 MKIFNTLTRQKEEFVPIAPGEAKIYACGPTVYNFIHIGNARPMCVFDILRRYLEYRG--M 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDKII +A +E + + Q++ D L T PR
Sbjct: 59 KVTFVQNFTDIDDKIIRKANEEKTD------YLTVAERYIQEYKTDARGLNIREATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + Q+I +I +++ G+AY N ++ F T YG S + ++E + G R+
Sbjct: 113 ATETMEQIIEIISDLVKKGYAYPAENGDVYFRTLKFSGYGKLSHQPLEELEAGARIGVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+ YLG DIH GG DLIFP
Sbjct: 173 SKEDPMDFALWKAAKPGEPYWDSPWGKGRPGWHIECSAMARTYLGDTIDIHCGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS C + + A+ W+HNG++N++ RKMSKS NF T+ E+ + +
Sbjct: 233 HHENEIAQSECCNGV-PFAHYWMHNGYINVDNRKMSKSLNNFFTVREV-------AKEFG 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
IR M+ +HYR PI+++V L + L + +
Sbjct: 285 YEPIRYLMVASHYRSPINYSVDLLKQCTAALERLYTCRENLEFVVSNAKPGREARDEEIK 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
A+ +DLNT AI L +LA++ N + L +FN+ A
Sbjct: 345 KRLEEYQNRFCEAMDDDLNTADAIAVLFELAKDINTNLSTATNPHKEIAEEALTLFNSLA 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ K+ ++ IE L+Q R+ K K ++ AD IR +L ++ +LED
Sbjct: 405 DVLGLLYVKKDTKDSLDEEIENLIQRRVEARKNKNWAEADRIRDELSARHVVLEDTPQGT 464
Query: 450 NGQRM 454
Sbjct: 465 KWHIG 469
>gi|331085695|ref|ZP_08334778.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
gi|330406618|gb|EGG86123.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 9_1_43BFAA]
Length = 468
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 188/485 (38%), Positives = 254/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL +K EF ++ +RMYVCGPTVY+F HIGNARPMIVFD + R Y E
Sbjct: 1 MKLYNTLTKKKEEFVPLEEKKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +EH S I+ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAIEEHVSAE------EISQRYIAECKKDMEGMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I +I G+AYE N + F T YG S + +D+ + G R V
Sbjct: 113 ATQEIDGMIEMIGQLIEKGYAYEKNGTVYFRTRKFGPYGKLSHKNLDDLRSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W+SPW GRPGWHIECS MS YLG DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPFWKSPWSDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+ E
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREIAE-------Q 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ V+R ML HYR P++F+ + + ++ L + + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMAASKNGLERIITAAENLKYLAANAKNGEMTDAEK 344
Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT AI A+ +L + + D LL
Sbjct: 345 VQIQETEKFVTAFEEAMEDDFNTADAIAAIFELVKFANTTADETSSQAYDSALLERIVHL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LGI V KE + ++ IE L++ER K K F AD IR +L KG ILED +
Sbjct: 405 SDVLGIIVVKEE--ELLAEDIEALIEERQAARKAKNFQRADEIRNELLEKGIILEDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VKWKR 467
>gi|331082990|ref|ZP_08332109.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
gi|330399727|gb|EGG79388.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 6_1_63FAA]
Length = 468
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 179/485 (36%), Positives = 254/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL +K EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R + Y E
Sbjct: 1 MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E S I+S+ ++ KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIAKAVEEGVSAE------EISSRYIKECKKDMADMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RVPE 181
AT I MI +IQ ++ G AYE N + F + YG S + +++ + G +V
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W SPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C + ++ A W+HN FLN++ RKMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSECCNG-KQFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ V+R ML HYR P++F+ + + ++ L +
Sbjct: 285 YDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTETEK 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+++ +D NT AI A+ +L + + + L
Sbjct: 345 ALEVEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIVHL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LG+ V KE + + IEKL++ER + K K F AD IR +L + G IL+D +
Sbjct: 405 SDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELAAMGIILKDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VQWKR 467
>gi|209885639|ref|YP_002289496.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
gi|226710846|sp|B6JHT8|SYC_OLICO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|209873835|gb|ACI93631.1| cysteinyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
Length = 464
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 229/468 (48%), Positives = 298/468 (63%), Gaps = 25/468 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+Y+TL + F +DP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MDLKLYDTLTKDKRAFVPLDPRNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITD+DDKI +RA +++P +P+N+AI +T K QF D L CL PT +
Sbjct: 61 DSHVTYVRNITDVDDKINDRALRDYPGLPLNEAIRKVTEKTATQFRADVDALGCLQPTVE 120
Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT+ + M+ LI+ +I GHAYEAN E++FDT+S+P+YG S RK++EQ+
Sbjct: 121 PRATDFVLPRPDGKTDMVSLIKTLIDRGHAYEANGEVLFDTASMPDYGQLSGRKLEEQQA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G R+ HKK+ ADF+LWK+S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG+ FDIHG
Sbjct: 181 GARIAVDAHKKHAADFVLWKQSSADEPGWDSPWGRGRPGWHIECSAMSAAYLGETFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HNGFL +EG KMSKS GNF+TINELL
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWLHNGFLQVEGEKMSKSLGNFVTINELL--- 297
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--IIDPAVLS 353
+ WP V+RL ML THYR PID+T++ L E+ L W T+ V+
Sbjct: 298 ----QDWPGEVVRLNMLKTHYRSPIDWTLKGLEESAKALDDWYATAGDAAGSAPADTVME 353
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL-LPIFNASAHILGI--------EVCKEHLNKN 404
L +DLNT + ALH L ++ K AS LG + K +
Sbjct: 354 TLCDDLNTAQTVAALHGLRHQAEKGDAAQRDQLAASLRFLGFFSETKDAWDARKREASGV 413
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + L+ +R K + +D IR +L + G ++D K +
Sbjct: 414 DAAQVTALIADRTAARARKDWKESDRIRDELAAMGVAIKDSKEGTTWE 461
>gi|283795457|ref|ZP_06344610.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
gi|291077118|gb|EFE14482.1| cysteine--tRNA ligase [Clostridium sp. M62/1]
gi|295091141|emb|CBK77248.1| cysteinyl-tRNA synthetase [Clostridium cf. saccharolyticum K10]
Length = 469
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 247/487 (50%), Gaps = 55/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTLSRQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E I+ + + KD + T P+
Sbjct: 60 -VNYVSNFTDVDDKIIRKAIEEGVDA------QTISERYIAECKKDMEMMNVKPATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M +IQ +I GHAY + + F T S YG S + +++ + G R V
Sbjct: 113 ATEEICGMEEMIQELIDKGHAYVAKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFRELKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPFWESPWCEGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS A+ + A W+HN FLN++ +KMSKS GNF T+ E+
Sbjct: 233 VFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFRTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ V+R ML HYR P++F+ + + + L +
Sbjct: 285 QYDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTGVERLRDLLAKAAEKEMSGEE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
+ + + +A+ +D NT AI A+ ++ + S +L
Sbjct: 345 RRNLETAAELVKKFEAAMDDDFNTADAISAIFEMVKLSNSTISEESSRAYLEELKGSIER 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + IE +++ER K K F+ AD IR +L G +LED +
Sbjct: 405 LCEVLGIIT--EKKAEVLDDEIEAMIEERQQARKAKNFALADEIRGKLLDMGIVLEDTRE 462
Query: 448 PDNGQRM 454
+R+
Sbjct: 463 GVKWKRV 469
>gi|295094035|emb|CBK83126.1| cysteinyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 463
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 190/480 (39%), Positives = 250/480 (52%), Gaps = 49/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI NTL R+ EF I+ + +YVCGPTVYD+ HIGNARPMIVFD L R L Y +
Sbjct: 1 MKILNTLTRRKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+RA +E + I+ + + KD L T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKRANEEGVDASV------ISERYIAEVKKDMAALNVREATTHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT IP MI +++ +I G+AYE N + F T +YG S++ ID+ + G R V
Sbjct: 113 ATEEIPDMIEMVKTLIEKGYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK EP W SPWG GRPGWH+ECS MS Y+G V DIH GG DL+
Sbjct: 173 VDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HNGFL + KMSKS GNF T+ E+ E
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+P VIR ML HYR P++F+ + ++ L + I
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERILTAVDRLKSISGTEGEVDKAVADE 344
Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILG 393
+A+ +DLNT AI + +L + + N +L ILG
Sbjct: 345 MDAFVKKYEAAMDDDLNTADAISVIFELVKYANVNVTEESTKATVELVLNTVTKLCDILG 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
I E + + IE L++ER K K F+ AD IR QL G ILED + +R
Sbjct: 405 IIT--EKKKEILDSDIEALIEERQAARKAKNFARADEIRDQLSDMGIILEDTREGVKWKR 462
>gi|269960838|ref|ZP_06175209.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|269834502|gb|EEZ88590.1| cysteinyl-tRNA synthetase [Vibrio harveyi 1DA3]
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFIAEIIELVEKLIERGFAYVADNGDVMFEVGKFNEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLNAAPAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTENLEKASELGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGDDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|149191898|ref|ZP_01870131.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148834246|gb|EDL51250.1| cysteinyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 460
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 175/482 (36%), Positives = 251/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPIHAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYVGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--KFVRNITDIDDKIIKRANENG------ESCESLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATEFIAEIIELVEKLIDRGFAYVADNGDVMFEVSKFDKYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L+ +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLD-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+R ++ HYR ++++ L +A L + + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLNQARSALERLYTSLRGLDLDAEPTGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKTVDLGQASQLGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGDNDEVAEIEALIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|315633667|ref|ZP_07888957.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
gi|315477709|gb|EFU68451.1| cysteine--tRNA ligase [Aggregatibacter segnis ATCC 33393]
Length = 459
Score = 404 bits (1038), Expect = e-110, Method: Composition-based stats.
Identities = 183/481 (38%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NTL R+ F+ I I MYVCG TVYD HIG+ R + FDV+ R LRY E
Sbjct: 1 MLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVVARYLRYLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCEQLVDRMVVEMYKDFDALNILRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIAIVEKLIQRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGNQ-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR ++++ + L A L +
Sbjct: 285 DAESVRYFLLSAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDTFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMARELNKLKTEDMDKANGLAARLRELAGILGLLQLDPEQFLQA 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K + +AD R L G +LED N T W++
Sbjct: 405 GSDDDEVAKIEGLIKQRNEARAAKDWPAADAARNALTQMGIVLEDGLN------GTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|320156698|ref|YP_004189077.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
gi|56749448|sp|Q7MLR5|SYC_VIBVY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|319932010|gb|ADV86874.1| cysteinyl-tRNA synthetase [Vibrio vulnificus MO6-24/O]
Length = 460
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 176/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ETCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ + YG S++ +D+ + G RV +
Sbjct: 113 RATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED + T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPD------GTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|75675421|ref|YP_317842.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
gi|109894914|sp|Q3STA1|SYC_NITWN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|74420291|gb|ABA04490.1| cysteinyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
Length = 477
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 244/478 (51%), Positives = 312/478 (65%), Gaps = 26/478 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL R+ F IDPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MDLRLYDTLTRRKRAFTPIDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI +RA ++ P +P+N+AI +T K QF D L CL PTHQ
Sbjct: 61 DDHVTYARNITDVDDKINDRAARDFPDLPLNEAIRKVTEKTAAQFQADVAALGCLPPTHQ 120
Query: 123 PRATNHI-------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PRAT + M+ I+ +I GHAYEA E++FD S+P+YG+ S R++DEQK
Sbjct: 121 PRATEFVLPRTDGKTDMVTFIKQLIARGHAYEAGGEVLFDVRSMPDYGALSGRRLDEQKA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G RV HK+NPADF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS+ YLG VFDIHG
Sbjct: 181 GARVAVDAHKRNPADFVLWKLSSENEPGWDSPWGRGRPGWHIECSAMSTAYLGDVFDIHG 240
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDLIFPHHENEIAQS CA AN W+HNGFL +EG KMSKS GNF+TINELL T+
Sbjct: 241 GGLDLIFPHHENEIAQSRCAHGTHAMANYWMHNGFLQVEGEKMSKSLGNFVTINELLTTE 300
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------- 345
KFGGR WP V+RL ML THYR+PID+T++ L E+E +L +
Sbjct: 301 KFGGRKWPGEVLRLNMLRTHYRQPIDWTIKALEESETILRRVCGRIKQFEYARRGMPTKE 360
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
+ P +L AL +DLNT + + +L+ + +H LL I +L
Sbjct: 361 RSVQLNLPPEILEALVDDLNTPLMLSRIGELSYDDAFDHALLSI---GIDVLSYARWLRS 417
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ S +++LV RL K F +D IR +L + G +L+D K+ D +T W+
Sbjct: 418 QEQYASSNVDELVVARLEARMRKDFKESDRIRDELAAMGVVLKDGKDADGKP-VTTWE 474
>gi|148980442|ref|ZP_01816064.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
gi|145961245|gb|EDK26558.1| cysteinyl-tRNA synthetase [Vibrionales bacterium SWAT-3]
Length = 461
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 179/483 (37%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY +N +++F+ YG S++ +D+ + G RV
Sbjct: 113 RATEFITEIIELVEKLIERGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF++WK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVVWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI +LL +
Sbjct: 233 PHHENEIAQSCCAHGTD-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDLLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDLTAAPAGGEEYVTRFST 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L ++ARE K L + A I+GI
Sbjct: 345 AMNDDFNTPEAYSVLFEMAREINRIKTESIEKASGLGALMRELADIIGILHQDPEAFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L++ R K +++AD R +L G +LED G T W
Sbjct: 405 DAAGNDDEVAEIEALIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|224475678|ref|YP_002633284.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|254781694|sp|B9DKW3|SYC_STACT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|222420285|emb|CAL27099.1| cysteinyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 466
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 169/482 (35%), Positives = 261/482 (54%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ ++P ++MYVCGPTVY++ HIGNARP I +DV+ R Y +
Sbjct: 1 MITLYNTLTRQKEPFEPLEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N+++ I + Q F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKLIKRSKE------LNESVPEIADRYIQAFYEDTGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMNHMDDIIEFIKDLVDKGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIESGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W+SP+G+GRPGWHIECS M+ + LG+ DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYNELGETIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNF+ +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------- 348
V+R M+ HYR PI++ ++ + A+ L + + + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNMELVESAKSGLERIRNSYQAIEEREAIATDIEDQSEYIEQ 344
Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
+ +D NT +AI + LA+ + K +F + +L
Sbjct: 345 IDQLLAQFEKVMDDDFNTANAITTWYDLAKLANKYVLENTTSKKVIERFKEVFQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
GI + + ++ + IE L++ER K K F+ AD IR QL+++ ILED +
Sbjct: 405 GIPLKGKQQDELLDEDIEALIEERNEARKNKDFARADEIRDQLKAQNIILEDTAQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|114777193|ref|ZP_01452204.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114552338|gb|EAU54821.1| cysteinyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 459
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 194/480 (40%), Positives = 267/480 (55%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNT++R+ F I P +I MYVCG TVYD+ H+G+AR MIVFDV+YR L +
Sbjct: 1 MSLMLYNTIKREKEAFVPIRPGHIGMYVCGVTVYDYCHVGHARVMIVFDVIYRWLMHSGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRN TD+DDKII+RA + AI +T++ F D L CL PTH+
Sbjct: 61 D--VDYVRNFTDVDDKIIKRAAERGI------AIDALTNEMIDAFHADADALGCLRPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ MI +IQ ++ AY + ++++ +YG S +KIDE + G+RV
Sbjct: 113 PRATAHMDAMISMIQALMEKDMAYVSESGDVLYAVRGFSDYGQLSGKKIDELESGSRVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + EP W SPWG+GRPGWHIECSAMS +LG FDIHGGG+DL
Sbjct: 173 DQSKRDPLDFVLWKMAKADEPAWASPWGQGRPGWHIECSAMSCGHLGDTFDIHGGGMDLK 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+ A+ A W+HNGF+N+ KMSKS GNF TI E+ E
Sbjct: 233 FPHHENEIAQARAANGGG-FARYWLHNGFVNINAEKMSKSLGNFFTIREVTER------- 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPA 350
+ V+R+ ML THYR P+DF+ L A+ L + +T+ +
Sbjct: 285 YHPEVLRMFMLGTHYRSPLDFSDAALDVAKSGLDRLYKTAKRCQESGVTGAGGQALLPHH 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCK----E 399
+A+ +D NT A+ L +R K + L F A + +LGI
Sbjct: 345 FTTAMDDDFNTPEALAVLFDTSRALNKGLNEAQDVTALAGQFTAMSALLGIVQQDTAIWF 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ AIE L++ERL K + F+ AD IR +L ++G +LED T WK+
Sbjct: 405 QSGDVDAAAIEALIEERLQARKNRDFARADAIRNELSAQGIVLEDS------ASGTTWKK 458
>gi|225568316|ref|ZP_03777341.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
gi|225162845|gb|EEG75464.1| hypothetical protein CLOHYLEM_04391 [Clostridium hylemonae DSM
15053]
Length = 468
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 181/485 (37%), Positives = 249/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL RK EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKLFNTLTRKKEEFVPVEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + ++ KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIKECKKDMEGMNVKPATKHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +I ++I G+AYE N + F T S +YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVEMIGSLIEKGYAYEKNGTVYFRTRSFKDYGKLSHKNLDDLRTGERSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W+SPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWDSPWSDGRPGWHIECSVMSRKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ KMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNHKMSKSLGNFRTVREI-------SEQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
+ V+R ML HYR P++F+ + + L +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASRNGLERIVNAAGNLKFLMGSAKSEEMTAQER 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+ +A+ +D NT A+ A+ +L + D LL
Sbjct: 345 EAFAGSEEFVKGFEAAMDDDFNTADAVAAVFELVKYINTTADAHSSRAYLQALLSRLVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+ V K+ + IEKL+ ER K K F+ AD IR L KG ILED +
Sbjct: 405 TDVLGLIVDKKE--DMLEEEIEKLIAERQAARKEKNFARADEIRGTLLEKGIILEDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VKWKK 467
>gi|194017569|ref|ZP_03056180.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
gi|194010841|gb|EDW20412.1| cysteinyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
Length = 466
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 170/489 (34%), Positives = 255/489 (52%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL RK EF ++P ++MYVCGPTVY++ HIGNARP IV+D + + L Y
Sbjct: 1 MTINIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + +P I + Q + +D + L C
Sbjct: 61 D--VNFVSNFTDVDDKLIKAANELGEDVPT------IADRFIQAYFEDVSALGCKKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I +I G+AYEA+ ++ + T S YG S + IDE K G R+
Sbjct: 113 PRVTENMDDIIAFIATLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKRDALDFALWKAAKDQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+E KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIV-------KEQ 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI++++ L + ++ + +
Sbjct: 285 DPDVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAEWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
+S + +D NT +AI L +LA+++ + + +F
Sbjct: 345 AKVEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++H + +E L+++R + + F+ +D IR QL+S +LED
Sbjct: 405 VLGFSLEEKHT---LDEEVEALIEKRNEARRNRDFALSDQIRDQLKSMNIVLEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -PQGTRWKR 464
>gi|253579512|ref|ZP_04856781.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849013|gb|EES76974.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 469
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 248/486 (51%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF ++ +RMYVCGPTVY+ HIGNARPMI+FD + R + Y E
Sbjct: 1 MKLFNTLTRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + + KD + T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVSA------QEISERYIAECKKDMDGMNVKPATTNPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RVP 180
AT I MI +IQ ++ G+AY A+ + F YG S + +D+ + G +V
Sbjct: 113 ATQEINGMISMIQTLVDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP W SPW GRPGWHIECS M+ YLG DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMAKKYLGDEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS C + + A W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 233 IFPHHENEIAQSECCND-KIFAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------- 345
+ V+R ML HYR P++F+ + A+ L + + +
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNALERITDAAANLKDRKAAAQTETATDAE 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
A+ +D NT A+ A+ +L + + N LL
Sbjct: 345 KELLAQAQEFVKKFEEAMDDDFNTADALAAIFELVKFANTNVSEASSAEFAGTLLDTMVK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG++ K + + IE L+ ER K K F+ AD IR +L +KG IL+D +
Sbjct: 405 LCDVLGLKAVK--TEEILDKEIEDLIAERQEARKAKNFARADEIRDELLAKGIILKDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|86147083|ref|ZP_01065400.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
gi|85835148|gb|EAQ53289.1| cysteinyl-tRNA synthetase [Vibrio sp. MED222]
Length = 461
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 177/483 (36%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--NFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY +N +++F+ YG S++ +++ + G RV
Sbjct: 113 RATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLEQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFST 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L ++ARE K L + A I+GI
Sbjct: 345 AMNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L++ R K +++AD R +L G +LED G T W
Sbjct: 405 DAAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|92114173|ref|YP_574101.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
gi|123084029|sp|Q1QVV6|SYC_CHRSD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91797263|gb|ABE59402.1| cysteinyl-tRNA synthetase [Chromohalobacter salexigens DSM 3043]
Length = 461
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 177/472 (37%), Positives = 252/472 (53%), Gaps = 41/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ F +D +RMYVCG TVYD+ HIG+AR M+ FD++ R LR+ E
Sbjct: 1 MQIYNTLTRRKETFTPLDAGRVRMYVCGITVYDYCHIGHARVMVAFDMITRYLRWRGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITDIDDKI++RA + ++ I+ +T + +D RL L P +PR
Sbjct: 60 -VDYVRNITDIDDKILKRAEEN------DEPIAALTERMIAAMHEDEGRLGVLRPDREPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT H+ ++ ++Q +I G+AY AN ++ + YG S R +D+ + G+RV +
Sbjct: 113 ATAHVDDIVAMVQRLIDKGYAYPAANGDVYYRVRRFEGYGKLSNRDLDDMRAGSRVEVET 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P E W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 173 AKEDPLDFVLWKAAKPGEASWPSPWGDGRPGWHIECSAMSTCCLGDTFDIHGGGPDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A N W+H G + ++ KMSKS GNF TI E+LE
Sbjct: 233 HHENEIAQSEAATGR-PYVNTWMHAGAVRVDQEKMSKSLGNFFTIREVLEAHA------- 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLSAL 355
V+R +L +HYR PI++ L++A L ++ + ++A+
Sbjct: 285 PEVVRYLLLASHYRSPINYAPDALSDARRSLERFYNALQGVAPVAGEVAAGYRERFIAAM 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------- 400
+D NT A+ L LARE + L +LG+
Sbjct: 345 DDDFNTAEALAVLFDLARELNRAKQEAPAHAPALAHELKELGGVLGLFGQDPEGFLQAGA 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
IE ++ R K K F++AD IR +L + G +L+D ++
Sbjct: 405 GRLPMSEEDIEARIEARAQAKKAKDFATADGIRDELAALGIVLKDGRDGTTW 456
>gi|164686505|ref|ZP_02210533.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
gi|164604516|gb|EDQ97981.1| hypothetical protein CLOBAR_00070 [Clostridium bartlettii DSM
16795]
Length = 474
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 185/487 (37%), Positives = 261/487 (53%), Gaps = 56/487 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNTL RK EF+ I+ ++MYVCGPTVY+F HIGNARP I+FD L R L Y +
Sbjct: 10 KLYNTLSRKKEEFKPIEEGKVKMYVCGPTVYNFIHIGNARPFIIFDTLRRYLEYRGYD-- 67
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT+V+N TD+DDKII+R+ +E N + +K +++ D L + P+
Sbjct: 68 VTFVQNFTDVDDKIIKRSHEE------NITPEEVATKYIKEYFVDADGLGIKRASVHPQV 121
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T++I Q+I ++ + G+AY N ++ FDT +YG S K +E + G R+ K
Sbjct: 122 TDNIEQIIAFVKELEDKGYAYAVNGDVYFDTKKFKDYGKLSGIKQEELEAGARIEVNDQK 181
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++P DF+LWK EPGW SPWG GRPGWHIECS MS+ YLG+ DIH GG DL FPHH
Sbjct: 182 RHPMDFVLWKAKKEGEPGWASPWGEGRPGWHIECSVMSNRYLGETIDIHAGGQDLKFPHH 241
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + +N W+HN ++N+ KMSKS GNF T+ E+ E +
Sbjct: 242 ENEIAQSEARSG-KNFSNYWLHNEYINVNNEKMSKSLGNFFTVREISEI-------YDLE 293
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------- 346
V+RL ML THYR PI+F+ + L +++ L +
Sbjct: 294 VVRLFMLSTHYRNPINFSDEILNQSKAGLERLYNAKEKAEFTINNLEDSKMTEEEAKLQD 353
Query: 347 ----IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHIL 392
+ A+ +D+NT A+ A+ +LA+ N L FN +L
Sbjct: 354 ELASFRQKFIDAMDDDVNTADAVSAIFELAKFMNSNITENSSKEFAQKALDEFNELTGVL 413
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
I V K+ + IEKL+++R K K F AD IR+QL KG +LED +
Sbjct: 414 NI-VNKDKKEDILDEEIEKLIEQRTEAKKNKNFQLADEIRQQLLDKGIVLEDTR------ 466
Query: 453 RMTRWKQ 459
+ +WK+
Sbjct: 467 QGVKWKR 473
>gi|120599417|ref|YP_963991.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
gi|166225307|sp|A1RL92|SYC_SHESW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120559510|gb|ABM25437.1| cysteinyl-tRNA synthetase [Shewanella sp. W3-18-1]
Length = 461
Score = 404 bits (1037), Expect = e-110, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 256/483 (53%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN++ R+ EF+ I+P I MYVCG T+YD HIG+ R + FD++ R LRY
Sbjct: 1 MPMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V + RNITD+DDKII+RA + N++ +T + + +D L L P
Sbjct: 61 YE--VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDF 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 EPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL
Sbjct: 173 VDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 QFPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAV 351
+ A +R +L HYR ++++ L +A L +
Sbjct: 285 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIVKF 344
Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VC 397
+A+ +D NT A L + R+ K L A +LG+
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFF 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + + IE L+ ER K + +AD R +L G +LED G T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARSEKDWPAADVARNRLNELGVVLED------GPSGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RKK 461
>gi|325263764|ref|ZP_08130497.1| cysteine--tRNA ligase [Clostridium sp. D5]
gi|324030802|gb|EGB92084.1| cysteine--tRNA ligase [Clostridium sp. D5]
Length = 468
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 177/485 (36%), Positives = 253/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL ++ +F I+ +RMYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKLYNTLSKRKEDFVPIEEGKVRMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E + ++ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAIEEGVTA------DEVSKRYIAECKKDMEGMNVKPATKHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +I +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVDMIGTLIEKGYAYEKNGTVYYRTRKFKEYGKLSHKNLDDLQSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++ DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ V+R ML HYR P++F+ + A+ L + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMDAAKTGLDRIITAADNLKFLKGNAKVQEMTSAEK 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
+ A+ +D NT AI ++ +L + + DLL +
Sbjct: 345 EAFTKTQEYIDSFERAMDDDFNTADAISSVFELVKYINTSADGESSAEYLQDLLDLLVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI V K+ + ++ IE L++ER K K F+ AD IR +L S+G +LED +
Sbjct: 405 TDVLGIIVEKDE--EMLAEDIEALIEERQAARKAKNFARADEIRDELLSRGIVLEDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VKWKK 467
>gi|218709995|ref|YP_002417616.1| cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
gi|254781698|sp|B7VGZ1|SYC_VIBSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218323014|emb|CAV19191.1| Cysteinyl-tRNA synthetase [Vibrio splendidus LGP32]
Length = 461
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 178/483 (36%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVTRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--NFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY +N +++F+ YG S++ +D+ + G RV
Sbjct: 113 RATEFITEIIELVEKLIQRGFAYVASNGDVMFEVKKFDEYGKLSKQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDVTAAPAGGEEYVTRFST 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L ++ARE K L + A I+GI
Sbjct: 345 AMNDDFNTPEAYSVLFEMAREINRIKTESIEKASALGALMRELADIIGILHQDPEAFLQG 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N + IE L++ R K +++AD R +L G +LED G T W
Sbjct: 405 DAAGNDDEVAEIEGLIKLRNDSRASKDWANADLARDKLNELGIVLED------GPEGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|188534564|ref|YP_001908361.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
gi|229558632|sp|B2VBD5|SYC_ERWT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|188029606|emb|CAO97484.1| Cysteinyl-tRNA synthetase [Erwinia tasmaniensis Et1/99]
Length = 462
Score = 403 bits (1036), Expect = e-110, Method: Composition-based stats.
Identities = 186/484 (38%), Positives = 253/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R FDV+ R LRY +
Sbjct: 1 MLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFAAFDVVARYLRYSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITDIDDKII+RA++ ++I +T++ + KD L L P +P
Sbjct: 61 L--KYVRNITDIDDKIIKRAQENG------ESIEQLTNRMIGEMHKDFAALNILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +++ L++ +I HAY +N +++F S P YGS SR+ +D+ + G RV
Sbjct: 113 RATRHITEIVELVEKLIAREHAYVASNGDVMFSVDSDPQYGSLSRQDLDQLQAGARVEVA 172
Query: 183 YH-KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK S EPGW SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+
Sbjct: 173 ADVKRNPMDFVLWKMSKADEPGWASPWGNGRPGWHIECSAMNCKQLGEHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++LE
Sbjct: 233 FPHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVLE-------H 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ A +R ++ HYR +++ L +A L + + +
Sbjct: 285 YDAETVRYFLMSGHYRSQLNYGEDNLNQARSALERLYIALRNTDTGATPAGGEEFETRFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKEH---- 400
A+ +D NT A AL LARE + P +LG+
Sbjct: 345 EAMDDDFNTPEAYSALFDLAREVNRMKAEAPAAADGLAARLRVLGGVLGLLEQDPEQFLQ 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
N IE L+Q R+ K ++ AD R +L G +LED G TR
Sbjct: 405 SGANSNDEEVAQIEALIQMRIDARNEKNWAQADVARDRLNEMGIVLED------GAGGTR 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|161501802|ref|NP_761714.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|30316151|sp|Q8D8R1|SYC_VIBVU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|319999475|gb|AAO11241.2| cysteinyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 460
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ETCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ + YG S++ +D+ + G RV +
Sbjct: 113 RATQYIQEIIELVERLIERGFAYVADNGDVMFEVNKFDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRCPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDFSAAPAGGEEYVSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKTEDLANASALGALMRELADVIGILHQDPDAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|224369425|ref|YP_002603589.1| CysS2 [Desulfobacterium autotrophicum HRM2]
gi|223692142|gb|ACN15425.1| CysS2 [Desulfobacterium autotrophicum HRM2]
Length = 477
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 182/497 (36%), Positives = 249/497 (50%), Gaps = 63/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT R F ++ + ++MYVCGPTVYD +HIG+AR ++VFDV++R LR+
Sbjct: 1 MSLRIYNTQTRTKETFIPLEKNKVKMYVCGPTVYDTSHIGHARSVVVFDVVFRWLRHSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRN TD+DDKII RA + + I+ + ++F + L L PT +
Sbjct: 61 D--VCYVRNFTDVDDKIINRANE------LGQDPKEISERYIKEFHNEMDALNVLRPTIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT HI +I IQ +I G AY ++ F S YG S R D+ G+R+
Sbjct: 113 PKATEHIQDIIDFIQRLIDKGKAYHVPGSDVFFSIQSFDEYGKLSGRNPDDMMPGSRIAV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK P EP W SPWG GRPGWHIECSAMS YLG+ FDIHGGG DLI
Sbjct: 173 DDKKRDPKDFTLWKPVKPGEPSWPSPWGDGRPGWHIECSAMSYKYLGESFDIHGGGKDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + WIHNGF+++ KMSKS GNF I ++L +
Sbjct: 233 FPHHENEIAQSEAAFG-KTFVRYWIHNGFVDINNEKMSKSLGNFTMIKDVL-------KD 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------GIIDP 349
+ V+R+ +L HYR PID+ + E L + G
Sbjct: 285 YHPEVMRMFLLSKHYRSPIDYNDTSMDEVISGLDRLYAFVERAQGAGATVNGVEPGKEWA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNASAHILG 393
+ +A+ +D NT A+ L + + D L ILG
Sbjct: 345 SFEAAMDDDFNTARAMATLFDTVKTGNRILDQQGETVSPETLSAVSTLCADLKRMGSILG 404
Query: 394 IEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
I + AIE+L+QER+ + K F+ AD IR +L++ +
Sbjct: 405 ILAQEPQDYFRAKKESGLAGKDLDGDAIERLIQERVAARQSKNFARADEIRAELDAMNIV 464
Query: 442 LEDYKNPDNGQRMTRWK 458
LED + T WK
Sbjct: 465 LEDGPD------GTTWK 475
>gi|297582426|ref|YP_003698206.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140883|gb|ADH97640.1| cysteinyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 467
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 173/489 (35%), Positives = 266/489 (54%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL R+ FQ I+ ++MYVCGPTVY++ HIGNARP +VFD++ R L Y
Sbjct: 1 MTIQLYNTLTRQKETFQPIEEGKVKMYVCGPTVYNYIHIGNARPAVVFDMVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV N TD+DDKII+ A + +++ + + + + DT L
Sbjct: 61 D--VTYVSNFTDVDDKIIKAANE------LDEDVMTVAERYIAAYYNDTEALGVRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I +I G+AYE++ ++ F T YG S++ +D+ + G R+ +
Sbjct: 113 PRVTESMDDIITFITRLIDKGYAYESSGDVYFRTRKFDTYGQLSQQSLDDLQAGARIQVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W SPWG GRPGWHIECSAM +LG DIH GG DL F
Sbjct: 173 EKKEDPLDFVLWKTAKEGEIAWSSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + ++ AN WIHNG++N++ KMSKS NFI +++++ R +
Sbjct: 233 PHHENEIAQSEALN-EQRMANYWIHNGYINIDNEKMSKSLNNFILVHDII-------RQF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------GIIDPA- 350
V+R ++ HYR PI+F+ ++L A+ L + T + G D
Sbjct: 285 DPDVVRFFIVNAHYRSPINFSDEQLETAKTSLERIQTTYENLTYRLGESADLGGGQDKWF 344
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
++++ +D N+ +A+ + L R++ L F+ A
Sbjct: 345 ALIRKEGERFIASMDDDFNSANAVAVMFDLVRQANIYLTEKHTSKEVLEAFLKQFDDMAF 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI V ++ + + +E+L++ER+ K + F+ AD IR L+ +G ILED
Sbjct: 405 VLGIAVKRQA--ELLDEDVEQLIEERIQARKDRDFARADEIRDSLKDQGIILEDT----- 457
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 458 -PQGTRWKR 465
>gi|323499496|ref|ZP_08104466.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323315369|gb|EGA68410.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 460
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 252/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ + +YG SR+ +D+ + G RV +
Sbjct: 113 RATEYIKEIIELVETLIERGFAYVADNGDVMFEIAKYDDYGKLSRQDLDQLQAGARVEIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSSLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGTD-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDISVPAAGGEDYVKRFTD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKTEDVMAASALGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|167758881|ref|ZP_02431008.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
gi|167663621|gb|EDS07751.1| hypothetical protein CLOSCI_01226 [Clostridium scindens ATCC 35704]
Length = 468
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 178/485 (36%), Positives = 251/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL ++ EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKLYNTLSKQKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+RA +E S I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKRAIEEGVSS------DEISKRYIAECKKDMDGMNIKPATKNPM 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +IQ +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVDMIQTLIDKGYAYEKNGTVYYRTRKFEEYGKLSHKNLDDLRSGERSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSDGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+ +
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SQQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
+ ++R ML HYR P++F+ + ++ L +
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSADLMEASKSGLERIVNAADNLKFLLGNAKSESMTQEEE 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT AI ++ L + D L +
Sbjct: 345 AAFAKTAEYVQEFERAMDDDFNTADAIASVFDLVKYINTTADADKSKEFLQNLFDLLVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+ V K+ + ++ IEK+++ER K K F+ AD IR +L +KG +LED +
Sbjct: 405 TDVLGLIVDKKE--EMLAEDIEKMIEERQAARKAKDFARADAIRDELLAKGIVLEDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VKWKK 467
>gi|254517452|ref|ZP_05129508.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
gi|226911201|gb|EEH96402.1| cysteinyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
Length = 466
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 164/488 (33%), Positives = 248/488 (50%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L RK EF + P I+MYVCGPTVY++ HIGN R I+FD + R Y
Sbjct: 1 MRVYNSLTRKKEEFIPLTPGEIKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYFEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I++A +E ++ S I + ++ KD L + + PR
Sbjct: 59 KVKFVQNFTDIDDKMIKKANEEGTTV------SDIGDRYIDEYYKDADGLNIMRASINPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I ++ +I G+AYE + ++ F T +YG + +++ + G R+
Sbjct: 113 ATEYIQDIIEFVKGLIEKGYAYEVDGDVYFRTKKFESYGKLIGQNLEDLQAGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK P EP WESPWG GRPGWHIECS M+ LG DIH GG+DL FPH
Sbjct: 173 KEDPMDFAVWKAQKPGEPAWESPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDLAFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + A W+H FLN+ +KMSKS NF+T ++L + + A
Sbjct: 233 HENEIAQSEALTG-KPFARYWLHGAFLNINNQKMSKSLNNFLTARDIL-------KQYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R ML HYR ++F+ L A+ + + ++ +
Sbjct: 285 DVVRFLMLSGHYRVQLNFSDDLLESAKASVERLYNAVSNLENLIDEVKKESMDDKEKAYL 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
+ + +D NT AI A+ L ++ N L + +
Sbjct: 345 EFLDVYRQRYIEKMDDDFNTADAITAIFDLIKDINTNVSIESSRELCEAALSLIRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + ++ IE+L+ ER K + F+ AD IR L+++ +LED
Sbjct: 405 LGIL--QNSTKGSLEEEIERLIAERQQARKDRNFALADKIRNDLKARNIVLEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 PQGVRWKK 464
>gi|114048058|ref|YP_738608.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
gi|123030490|sp|Q0HTK4|SYC_SHESR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|113889500|gb|ABI43551.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-7]
Length = 461
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 179/483 (37%), Positives = 253/483 (52%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN++ R+ EF+ I P + MYVCG TVYD HIG+ R + FD++ R LRY
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V + RNITDIDDKII+RA + + + +T + + KD L + P
Sbjct: 61 YE--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDF 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I +++ ++ GHAY A+ +++F +S P YG S + +++ + G RV
Sbjct: 113 EPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL
Sbjct: 173 VDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 QFPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAV 351
+ +R +L HYR I+++ + L +A L +
Sbjct: 285 HYDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VC 397
+A+ +D NT A L + RE + + A +LG+
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFF 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + + IE L+ ER K + +AD R +L G +LED G T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RKK 461
>gi|119774358|ref|YP_927098.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
gi|187631632|sp|A1S4X2|SYC_SHEAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119766858|gb|ABL99428.1| cysteinyl-tRNA synthetase [Shewanella amazonensis SB2B]
Length = 459
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 255/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSISRQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVCFDMIVRYLRYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITD+DDKII+RA + ++ +T + + D L + P+ +P
Sbjct: 61 --VNYQRNITDVDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMVRPSFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I ++ ++ GHAY A+ +++FD SS YG S + +++ + G RV
Sbjct: 113 RATLHIDEIIDMVTRLLDRGHAYVAADGDVLFDVSSYAAYGRLSGQDLEQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ENKRNPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNTWMHTGMVMVDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + ++
Sbjct: 285 DAQTVRYFLLSGHYRSQLNYSEDNLKQARASLERMYTALKGLDLTVEAAGADEFVSRFMA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLP------IFNASAHILGIE------VCKE 399
A+ +D NT A L + RE K D+ A +LGI +
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKTSDMAAASQLGVALKELAEVLGILSSTPEAFLQG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+ ER K + +AD R +L + G +LED G T W++
Sbjct: 405 EGNADEVAEIEALIVERNRARAEKDWPAADVARDRLNALGVVLED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|315127193|ref|YP_004069196.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
gi|315015707|gb|ADT69045.1| cysteinyl-tRNA synthetase [Pseudoalteromonas sp. SM9913]
Length = 459
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 174/478 (36%), Positives = 259/478 (54%), Gaps = 46/478 (9%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IYNTL R+ EF+ + I MYVCG T+YD+ HIG+AR + FDV+ R LR+ +
Sbjct: 3 QIYNTLTRQKEEFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHLGYDL- 61
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
YVRNITD+DDKII+RA + +AI+ +T + T+ +D L L P +P
Sbjct: 62 -KYVRNITDVDDKIIKRANENG------EAINDLTVRMTKAMHEDFDSLNMLRPDIEPTV 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+ ++I +++ +I GHAY A+ +++FD S+ YG+ S++ + + G+RV
Sbjct: 115 TGHMDEIIAMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQD 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K +P DF+LWK++ EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FPH
Sbjct: 175 KDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQSCCA+ + N WIH G + + KMSKS NF T+ E+L + + A
Sbjct: 235 HENEIAQSCCANNGQ-YVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYDA 286
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSAL 355
+R ++ HYR ++++ + L +A L + ++ A+
Sbjct: 287 ESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVECELEGNEYVAKFRKAM 346
Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------ 401
+D N+ A+ + ++A+E + D L I + ILGI
Sbjct: 347 NDDFNSPEALPVVFEVAKELNRVKDSDSEKAGHLAFILRSLGEILGIAQQAPEAFLQGGQ 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+ +R K +++AD R L + G +LED T W++
Sbjct: 407 NDDEVAEIEALIVKRNDARASKNWAAADEARDALNALGVVLEDS------AGKTTWRK 458
>gi|57640379|ref|YP_182857.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68735029|sp|Q5JD45|SYC_PYRKO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|57158703|dbj|BAD84633.1| cysteinyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 476
Score = 403 bits (1035), Expect = e-110, Method: Composition-based stats.
Identities = 185/495 (37%), Positives = 250/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIYNTL R+ EF+ + +RMYVCGPTVYD+ HIG+AR I FDV+ R L +
Sbjct: 1 MGIKIYNTLTRQKEEFKPLREGEVRMYVCGPTVYDYTHIGHARTYIAFDVIRRYLEHKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII+RA + + + K + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIKRANETG------EDPKELAEKFLKYFLEDMKALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I I+ + G+AYE ++ + F+ +YG S+ K+++ G RV
Sbjct: 113 PRVTEHIQDIIDFIRKLQEKGYAYEGSDGVYFEVRKFKDYGKLSKVKLEDLVKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ E W+H GFL + G KMSKS GNF+TI E LE +
Sbjct: 233 PHHENEIAQTEACTGHE-WVRYWMHTGFLMVNGEKMSKSLGNFVTIREALER-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STSKGII 347
VIRL +L HYR P+D+T + L A+ L + T +
Sbjct: 285 DPEVIRLFVLQRHYRSPLDYTEEGLEHAKNNLERLYNTLENIRVAMERAEISFKWGEEEF 344
Query: 348 DPA---------VLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ + F
Sbjct: 345 EAYEAIRDGRKKFYDAMDDDFNTAEALKAVFEVSNAINRYLTQVEKPKESILRKAWEFFK 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ + GI + +E I+ L+ R L K +KF AD IR +L + G LED
Sbjct: 405 MVSEVFGIFEDYFREQKAGEEEALIKLLIDVRAQLRKERKFDLADKIRDELRNLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 T------PQGTVWKR 473
>gi|39998454|ref|NP_954405.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|61216254|sp|Q747A2|SYC_GEOSL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|39985401|gb|AAR36755.1| cysteinyl-tRNA synthetase [Geobacter sulfurreducens PCA]
Length = 481
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 190/503 (37%), Positives = 262/503 (52%), Gaps = 67/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL +F ++P ++MYVCG TVYD HIG+AR +VFD++YR LR+
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA +E ++I+ + +F +D L PT+Q
Sbjct: 61 E--VTYVRNYTDVDDKIINRANKEGV------PFNVISERFIAEFDRDMAALGLDLPTYQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +MI +I+ ++ G AY A+ ++ F + Y S+R ++E + G R+
Sbjct: 113 PKATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + A WIHNGF+N+ KMSKS GNF TI E+LE+ +
Sbjct: 233 PHHENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A V+R +L HYR PIDF+ Q L EA L +
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEEL 344
Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASA 389
+ A+ +D NT A+ + L R + +
Sbjct: 345 AEKAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVG 404
Query: 390 HILGI---------EVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ E K + IE+L++ER K + F AD IR L +
Sbjct: 405 AVLGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKARDFRRADEIRDTLAA 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G +L D + T WK K
Sbjct: 465 QGILLLDS------AQGTTWKVK 481
>gi|210608929|ref|ZP_03288066.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
gi|210152846|gb|EEA83852.1| hypothetical protein CLONEX_00246 [Clostridium nexile DSM 1787]
Length = 476
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 184/485 (37%), Positives = 253/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 9 MKLYNTLSRRKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E S + I+ + + KD + T P
Sbjct: 68 -VNFVSNFTDVDDKIIKKAIEEGVSA------NEISQRYIAECKKDMAGMNVKPATKHPL 120
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +IQ +I G+AYE N + F T YG S + +D+ + G R V
Sbjct: 121 ATEEICGMIEMIQELIDKGYAYEKNGTVYFRTRKFDEYGKLSHKNLDDLQSGGRSLLVSG 180
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG DIH GG DL+
Sbjct: 181 EDEKEDPLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLV 240
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 241 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SEQ 292
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
+ V+R ML HYR P++F+ + ++ L++
Sbjct: 293 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLTRIVTAVDNLKHLENATSAEAMTDVEK 352
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNAS 388
+T +A+ +D NT AI ++ +L + + +
Sbjct: 353 ETFEKTKEFVEGFETAMEDDFNTADAIASIFELVKFANTTATAESSKEYLKGLHDLIVKL 412
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
A +LG+ V KE + ++ IEKL++ER K K F AD IR +L KG ILED +
Sbjct: 413 ADVLGLIVEKEE--ELLAEDIEKLIEERQAARKEKNFKRADEIRNELLEKGIILEDTREG 470
Query: 449 DNGQR 453
+R
Sbjct: 471 VKWKR 475
>gi|145636711|ref|ZP_01792377.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
gi|145270009|gb|EDK09946.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittHH]
Length = 459
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 259/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLDYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWSSPWGTGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVATFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+ +
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDVEKANGLAARLRELGAILGLLQQEPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+++R K +S+AD R +L + G +LED G T W++
Sbjct: 405 GSDDDEVAKIEALIKQRNEARVAKDWSAADSARNELTAMGIVLED------GANGTTWRK 458
Query: 460 K 460
+
Sbjct: 459 Q 459
>gi|260892309|ref|YP_003238406.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260864450|gb|ACX51556.1| cysteinyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 474
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 255/494 (51%), Gaps = 61/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNTL ++ F +P +RMYVCGPT Y++ H+GNAR ++VFD + R L Y
Sbjct: 1 MIEVYNTLTKRKEPFVPREPGRVRMYVCGPTTYNYIHLGNARALVVFDTIRRYLEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDKII+RA +E + K + + +D ++ P
Sbjct: 60 -RVFFVQNFTDIDDKIIKRAAEEKMD------PQELALKYIEAYFEDADQINIKRADVHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++H+P+++ LI +I G AY A ++ F P YG S R++ E + G RV
Sbjct: 113 RVSDHLPEIVELISILIDKGFAYAAEGDVYFAVRKFPAYGKLSGRQLSELRAGARVEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF LWK++ P EP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DLIFP
Sbjct: 173 NKRDPLDFALWKKAKPGEPSWPSPWGEGRPGWHIECSAMALKYLGPEFDIHGGGSDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNGF+ ++ KMSKS GN + +++E +P
Sbjct: 233 HHENEIAQSEAATGR-PFARYWLHNGFITVKEEKMSKSLGNVFLLRKVMEL-------YP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
P +RL +L THYR P+ +T + L A LS+ +
Sbjct: 285 PPAVRLFLLSTHYRSPLAYTPEYLEGAAKALSRLRSSWLFLQEAQKQAEESSGGTEQLAR 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------IFNASAHI 391
+ +A+ +D NT A+ LA E +L P ++ + +
Sbjct: 345 LDKWEQDFTAAMDDDFNTARALALFFDLAHEINSWAELRPLPPAPVLRRALLLWVSFNRV 404
Query: 392 LGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ ++ + ++ LV+ R + K +++AD IR+ L++ G +LED
Sbjct: 405 LGLFPERRGLPVVEQERTMVLEELVKLLVEIRQEARQRKDWATADRIRESLKNLGIVLED 464
Query: 445 YKNPDNGQRMTRWK 458
TRW+
Sbjct: 465 T------PAGTRWR 472
>gi|253995884|ref|YP_003047948.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
gi|253982563|gb|ACT47421.1| cysteinyl-tRNA synthetase [Methylotenera mobilis JLW8]
Length = 466
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 191/485 (39%), Positives = 267/485 (55%), Gaps = 51/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ F I + MYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MLKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRASGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN+TDIDDKII+RA + N+ I+ +T + +D+ +L L P +P
Sbjct: 60 -NVTYVRNVTDIDDKIIKRANEN------NETIAQLTQRFIDAMDEDSAKLGVLRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT + M+ +I +I G AY AN ++ + SS YG S + +++ + G RV
Sbjct: 113 KATEFVDGMLSMIAALIDKGFAYPAANGDVFYSVSSFQGYGKLSGKSLEDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK + P EP WESPWG+GRPGWHIECSAMSSH+LG+ FDIHGGG DL F
Sbjct: 173 SFKKDPMDFVLWKAAKPGEPSWESPWGKGRPGWHIECSAMSSHHLGQHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
PHHENEIAQS A + + N W+HNGF+ ++ KMSKS GNF TI +LE
Sbjct: 233 PHHENEIAQSEAAHSHDGKPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE----- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLS- 353
+ A VIR +L HYR P++++ Q L +A++ L++ S ID
Sbjct: 288 --QYDAEVIRFFILRAHYRSPLNYSDQHLNDAKLALTRLYTALRGVDVSDDAIDWQHPYA 345
Query: 354 -----ALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL----- 401
A+ +D NT A+ L LA E K + + A +LG+ K
Sbjct: 346 ARFKLAMDDDFNTPEAMAVLFDLANEVNKTKSTEAAGLLKGLASVLGLLSRKSDEFLQAK 405
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++ ++ +RL + K F+ AD IRK+L G ILED +
Sbjct: 406 TNANGAANDGAAELDVDAMIVKRLEAKQAKNFAEADRIRKELAEAGIILEDT------PQ 459
Query: 454 MTRWK 458
T W+
Sbjct: 460 GTTWR 464
>gi|157690877|ref|YP_001485339.1| cysteinyl-tRNA synthetase [Bacillus pumilus SAFR-032]
gi|187629792|sp|A8F962|SYC_BACP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157679635|gb|ABV60779.1| cysteine--tRNA ligase [Bacillus pumilus SAFR-032]
Length = 466
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 170/489 (34%), Positives = 256/489 (52%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL RK EF ++P ++MYVCGPTVY++ HIGNARP IV+D + + L Y
Sbjct: 1 MTINIYNTLTRKKEEFVPLEPGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRKYLEYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + +P I + Q + +D + L C
Sbjct: 61 D--VNFVSNFTDVDDKLIKAANELGEDVPT------IADRFIQAYFEDVSALGCKKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I+ +I G+AYEA+ ++ + T S YG S + IDE K G R+
Sbjct: 113 PRVTENMDDIIAFIETLIEKGYAYEADGDVYYSTRSFEGYGKLSHQSIDELKTGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKRDALDFALWKAAKNQEISWDSPWGEGRPGWHIECSAMVKKYLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+E KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KPFAKYWMHNGYINIENEKMSKSLGNFVLVHDIV-------KEQ 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI++++ L + ++ + +
Sbjct: 285 DPDVLRFFMLSVHYRHPINYSMDLLESTKSAFNRLKTSYANLHHRLESSTNITEDNAKWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
+S + +D NT +AI L +LA+++ + + +F
Sbjct: 345 AKVEEQRATFISEMNDDFNTANAISVLFELAKQANYYMENDHTSEEVIKAFIGLFQEITS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++H + +E L+++R + + F+ +D IR QL+S +LED
Sbjct: 405 VLGFSLEEKHT---LEKEVEALIEQRNEARRNRDFALSDQIRDQLKSMNIVLEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -PQGTRWKR 464
>gi|304315919|ref|YP_003851064.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777421|gb|ADL67980.1| cysteinyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 464
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 187/488 (38%), Positives = 257/488 (52%), Gaps = 58/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK EF ++ + + MYVCGPTVY+F HIGNAR IVFD + R L Y
Sbjct: 1 MKIYNTLTRKKEEFVPLNDNIVNMYVCGPTVYNFIHIGNARAFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDK+I+R+ +E N + + + +++ KD L T PR
Sbjct: 59 KVNYVQNFTDIDDKLIKRSHEE------NTTVKELADRYIEEYFKDADSLGIKRATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I ++ +I G AY N ++ +DT+ YG S + IDE K G R+
Sbjct: 113 ATENIDDIINFVKKLIDKGFAYVLNGDVYYDTTKFKEYGKLSHKNIDELKAGARIEVNED 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF+LWK + EP W+SPWG+GRPGWHIECS MS+ YLGK DIH GG DLIFPH
Sbjct: 173 KKNPTDFVLWKAAKEGEPYWDSPWGKGRPGWHIECSTMSTKYLGKTLDIHAGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A+ E A W+H G+LN+ KMSKS NF T+ ++ +
Sbjct: 233 HENEIAQSEAANDAE-FARFWMHIGYLNINNEKMSKSKNNFFTVRDITS-------QYDP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
V+R ML +HYR PI+F+ L +++ + T +
Sbjct: 285 EVLRFFMLTSHYRNPINFSHDLLEQSKSGFLRLSNTVDNLRHLLDDALDRELSDEEKAYK 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
A+ +D NT AI L ++ R+ N D +L IF + +
Sbjct: 345 EKYDEYKRRFEEAMDDDFNTADAISVLFEMVRDINTNIDGNSPKELIEYILDIFLKLSSV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI K + I+KL+++R K K ++ AD IR +L+ +G LED
Sbjct: 405 LGISYKK---RDLLDDEIKKLIEKREEARKAKNWAEADKIRDELKKQGIALEDT------ 455
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 456 PSGVRWKR 463
>gi|312126760|ref|YP_003991634.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311776779|gb|ADQ06265.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 465
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL EF+ ++ ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + Q++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGITVF------ELAERFIQEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDMLKAA 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + ILGI
Sbjct: 345 IEDLKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV++R K K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYSEKEEAIPQEILELVKKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|157962505|ref|YP_001502539.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
gi|187631637|sp|A8H617|SYC_SHEPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157847505|gb|ABV88004.1| cysteinyl-tRNA synthetase [Shewanella pealeana ATCC 700345]
Length = 459
Score = 402 bits (1034), Expect = e-110, Method: Composition-based stats.
Identities = 178/481 (37%), Positives = 252/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R+ +F + P + MYVCG T+YD HIG+ R + FD++ R LRY +
Sbjct: 1 MLKLYNSLTRQKEQFVPLQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + ++ +T + + +D L P ++P
Sbjct: 61 --VNFQRNITDVDDKIIKRANENK------ESCDSLTERLIAEMHRDFDALNMARPDNEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P++I +++ +I HAY +N +++F SS P YG S + +++ + G RV +
Sbjct: 113 RATLHMPEIIEMVEKLIEREHAYVASNGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DAKRDPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A+ L + S
Sbjct: 285 DATTVRYFLLSGHYRSQLNYSEDNLKQAKSGLERIYTALKDLDLTVEAAPAEEFVAKFKS 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + RE K L A +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKATDMAKASALGVALKQLADVLGILGQDVDTFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGNDDEVAEIEALIVERNRARAEKDWPAADVARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|312135922|ref|YP_004003260.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311775973|gb|ADQ05460.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 465
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 183/479 (38%), Positives = 252/479 (52%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL EF+ ++ ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLTMTKEEFEPLEQGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDI+DK+I RA +E ++ + + +++ KD RL T PR
Sbjct: 60 -VIYIQNFTDIEDKMINRANKEGITVF------ELAERFIKEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT IP MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIPDMITLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDLSEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWH+ECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWLSPWGEGRPGWHVECSVMAMKYLGETIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
+RL ML HYR+P++F++ + +AE L + + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAESALKRIYKCYENLEYLIRNETGSNSSNSTLKAS 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ A+ +DLNT A L ++ RE + + ILGI
Sbjct: 345 LEQFKIKFIDAMEDDLNTAEATGYLFEMVREINTHANTCSKDVLILARDTLKELCGILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
E I + I +LV++R K K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYEQKEDEIPLEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|254473467|ref|ZP_05086864.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
gi|211957583|gb|EEA92786.1| cysteinyl-tRNA synthetase [Pseudovibrio sp. JE062]
Length = 483
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 225/465 (48%), Positives = 289/465 (62%), Gaps = 28/465 (6%)
Query: 15 ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
F +D SN+RMYVCGPTVYD+AHIGNARP++VFDVL RLLR YG+ VTYVRNITD
Sbjct: 22 KEAFVPMDASNVRMYVCGPTVYDYAHIGNARPVVVFDVLARLLRQLYGKDHVTYVRNITD 81
Query: 75 IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
+DDKI ERA +E S I +T K Q+ D L AP +PRAT HI +M
Sbjct: 82 VDDKINERAAREGIS------IRELTEKTAGQYHADMEALGAQAPDIEPRATEHIEEMKV 135
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+I+ ++ GHAY A+ ++F S+P YG S R +DE G RV +KK+P DF+LW
Sbjct: 136 MIETLVDKGHAYVADEHVLFHVPSMPEYGKLSNRTLDEMVAGARVEVASYKKDPTDFVLW 195
Query: 195 KRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
K S EPGWESP GRPGWHIECSAMS +LGKVFDIHGGG+DL FPHHENEIAQ
Sbjct: 196 KPSKADEPGWESPCGIETPGRPGWHIECSAMSEKHLGKVFDIHGGGVDLTFPHHENEIAQ 255
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S CA AN+W+HNGFL +EG KMSKS GNF T+++LL+T++ GGR W IR A+
Sbjct: 256 SRCAHDTHAMANVWLHNGFLQVEGEKMSKSLGNFFTVHQLLDTEEGGGRKWSGQAIRYAL 315
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKW-------PQTSTSKGIIDPAVLSALYNDLNTVSA 364
L T YR+PIDFT + L E E L++W T+ G D AVL L +DLNT A
Sbjct: 316 LQTQYRQPIDFTFKSLAEGEKQLTRWADLLKKHDVTAQENGTPDEAVLEGLKDDLNTPRA 375
Query: 365 IQALHKLAREST-KNHDLLPIFNASAHILGIEVC-----------KEHLNKNISIAIEKL 412
ALHKLAR++ + D S LG ++ + ++ + +E+L
Sbjct: 376 FAALHKLARDARGGDADAAQKLANSIKFLGFDLESFSKAQSEEKAEADVSPELKAKVEEL 435
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ +RL K+K F+ +D IR +L + G +L+D KN + G+ T W
Sbjct: 436 IAKRLEARKVKDFAESDRIRDELAADGIVLKDMKNKETGEIETTW 480
>gi|261855684|ref|YP_003262967.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
gi|261836153|gb|ACX95920.1| cysteinyl-tRNA synthetase [Halothiobacillus neapolitanus c2]
Length = 454
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 182/475 (38%), Positives = 252/475 (53%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IY++ R EF I P + MYVCG TVYD HIG+AR M+VFD++ R R E
Sbjct: 1 MLVIYDSHARAKREFVPIKPKTVGMYVCGMTVYDRCHIGHARVMVVFDMVVRYFRASGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + ++I +T + + D L CL PT +P
Sbjct: 61 --VHYVRNITDIDDKIIARAAENK------ESIRSLTERYIEAMHDDAAALGCLLPTAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + M+ +I+++I GHAY AN ++ FD S+ YG S R D+ + G RV
Sbjct: 113 RATESVGDMVAMIESLIERGHAYRAANGDVYFDVSTFDRYGELSNRNPDDLRAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK P +P W++P+G GRPGWHIECSAMS+ LG FDIHGGG DL F
Sbjct: 173 EAKTDPLDFVLWKAEKPGDPSWDAPFGPGRPGWHIECSAMSTRALGATFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+HNGF+ + KMSKS GNF T+ E++ R +
Sbjct: 233 PHHENEIAQSECATGHH-YVNYWMHNGFVRINEEKMSKSLGNFFTVAEVM-------RQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDPAVLSAL 355
VIRL +L +HYR P++++ Q L A L++W + +
Sbjct: 285 HPEVIRLFVLSSHYRSPLNYSDQNLDAARASLTRWYTAIKDAPQNGTPNPEVMARFRGVM 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEH---------LNKN 404
+D NT A+ + + E ++ D A IL + ++
Sbjct: 345 DDDFNTPEALAIVFEQISELNRSKDANCAATIKAIGEILNLGQHDPESFLRWAPSSSDQL 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AIE+ + ER K F+++D IR +L++ G +LED T W++
Sbjct: 405 SDEAIEQKIAERASARANKDFAASDRIRDELQAAGIVLEDK------AGQTTWRR 453
>gi|319649137|ref|ZP_08003345.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
gi|317388837|gb|EFV69656.1| cysteinyl-tRNA synthetase [Bacillus sp. BT1B_CT2]
Length = 463
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 169/484 (34%), Positives = 253/484 (52%), Gaps = 57/484 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
YNTL RK F ++ ++MYVCGPTVY++ HIGNARP IVFD + + L Y E V
Sbjct: 2 YNTLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRKYLEYKGYE--VQ 59
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YV N TD+DDK+I+ A + +P+ I + + + +D L C PR T
Sbjct: 60 YVSNFTDVDDKLIKAANELGEEVPV------IAERFIKAYFEDVGSLGCTKADCHPRVTE 113
Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
++ ++I IQ +I G+AYEA+ ++ + T S YG S + +DE + G R+ K++
Sbjct: 114 NMDEIIDFIQTLIDKGYAYEADGDVYYKTRSFEGYGKLSHQSVDELRSGARIQVGEKKED 173
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL FPHHEN
Sbjct: 174 ALDFTLWKAAKDNEISWDSPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLAFPHHEN 233
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQS + A W+HNG++N++ KMSKS GNF+ +++++ + V+
Sbjct: 234 EIAQSEALTG-KPFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KEHDPQVL 285
Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSKGIIDP 349
R ML HYR PI+++V+ L + + I+
Sbjct: 286 RFFMLSVHYRHPINYSVELLENTKNAFGRLKTAYSNLQHRLKSSTNLTEGDSEWLEKIEE 345
Query: 350 AVLSA---LYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHILGIE 395
+ + +D NT +AI L LA+ + +F+ +LG
Sbjct: 346 QRKAFQTAMDDDFNTANAISVLFDLAKHANYYLQEKNTAEHVIQAFIQLFDEICSVLGFS 405
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ ++ L + IE+L+++R + + F+++D IR QL+S ILED + T
Sbjct: 406 LKEQEL---LDKDIEELIEKRNEARRNRDFATSDQIRDQLKSMNIILEDT------PQGT 456
Query: 456 RWKQ 459
RWK+
Sbjct: 457 RWKR 460
>gi|315230286|ref|YP_004070722.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183314|gb|ADT83499.1| cysteinyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 474
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 182/493 (36%), Positives = 248/493 (50%), Gaps = 60/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL ++ EF+ + +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MKVYNTLTKQKEEFKPLREGEVRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII RA++ + + K + F++D L PR
Sbjct: 59 TVLMVMNFTDIDDKIIRRAQETG------EDPKELAEKFLKYFLEDMKALKVKPADIYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T HI +I ++ + G+AYE ++ + F+ +YG S K++E + G RV
Sbjct: 113 VTEHIEDIIDFVKKLEEKGYAYEGSDGVYFEVQRFRDYGKLSGIKLEELRKGARVEPGEG 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF LWK++ P EP W+SPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSTMSTKYLGEQFDIHGGGNDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ E W+H GF+ ++G KMSKS GNF+TI ELL + +
Sbjct: 233 HENEIAQTEACTGKE-WVRYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------QRYSP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------------ 340
VIR +L HYR P+D+T + + A+ L K T
Sbjct: 285 EVIRFFVLQKHYRSPLDYTEEGIQHAKNNLEKLYNTIENIRIALEKAEIPFKWSKEEFEL 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
A+ +D NT A++ + ++A K L F
Sbjct: 345 YEVIREAKRKFYEAMDDDFNTAEAMKPIFEVANAVNKYLAKVEKPKESVLRKALEFFKMV 404
Query: 389 AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ GI E KE IE L+Q R L K K ++ AD IR +L G LED
Sbjct: 405 GEVFGIFEEYFKETKETKEEELIELLIQVRAELRKQKNYALADKIRAELRELGIQLEDT- 463
Query: 447 NPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 464 -----PQGTIWKR 471
>gi|269792622|ref|YP_003317526.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100257|gb|ACZ19244.1| cysteinyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 468
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 180/490 (36%), Positives = 255/490 (52%), Gaps = 58/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++YN L + F ++ +R YVCGPTVYD+ HIGNARP IVFDV+ R L +
Sbjct: 1 MAFEVYNDLTNRKEPFVPLEEGKVRFYVCGPTVYDYFHIGNARPFIVFDVMRRYLEHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TDIDDK+I+RA++ + + + + + + +D L T
Sbjct: 61 Q--VTYVQNFTDIDDKMIKRAQE------MGITVKELADRFIEAYYQDADALGIRRATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT IP +I LI+ +I GHAY+ + ++ FD S P YG ++ ++E + G RV
Sbjct: 113 PKATEEIPHIIELIELLIQKGHAYQIDGDVYFDVMSYPPYGKLIKQDLEELQSGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP W+SPWG GRPGWHIECSAM H+LG D HGGG DL+F
Sbjct: 173 PRKRHPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMCRHHLGDTIDFHGGGCDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNG+L ++ KMSKS GNF+T +L+ + +
Sbjct: 233 PHHENEIAQSEAATG-KPFVRYWVHNGYLMIDKEKMSKSLGNFMTARDLM-------KRF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------- 341
P VIRL ML HYR PI+F+ + L +A+ L +
Sbjct: 285 PPLVIRLFMLSAHYRSPINFSEENLRQAQAALERLRNGWAQIRFALDNPPPSTSESRELR 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
A+ +DLNT A+ A+ L R + + +
Sbjct: 345 EQIARYRDDFHRAMDDDLNTAEALGAVFSLIRATNSHLSRGDSPDLAALEEASNFLRDVD 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
I+G+ E + +E L++ER K + F+ AD IR +L S G +LED
Sbjct: 405 RIMGVIGIDE---DQLDRDVEALIEERNAARKARDFAKADAIRDRLSSMGIVLEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|90407713|ref|ZP_01215892.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
gi|90311182|gb|EAS39288.1| cysteinyl-tRNA synthetase [Psychromonas sp. CNPT3]
Length = 460
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 176/482 (36%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL ++ EF + + MYVCG T+YD HIG+ R + FD + R LR+ +
Sbjct: 1 MLKIYNTLSKQKEEFTPLVAGKVSMYVCGVTIYDNCHIGHGRTFVAFDSVVRYLRFKGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
++RNITD+DDKII+RA + N++ +T++ T+ +D L L P +P
Sbjct: 61 L--NFIRNITDVDDKIIKRANEN------NESCDALTARFTKAMHRDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T H+P +I +I+ +I HAY +N +++F SS YG S + +D + G RV +
Sbjct: 113 RVTEHMPDVIAMIKTLIEKQHAYVASNGDVLFSVSSFDGYGKLSGQNLDMLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK S EP WESPWG GRPGWHIECSAMS +LG +FDIHGGG DL F
Sbjct: 173 ESKHDPLDFVLWKMSKENEPSWESPWGAGRPGWHIECSAMSFKHLGPIFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA AN W+H+G + ++ KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSCCAHDA-TYANTWMHSGMVQVDKVKMSKSLNNFFTIKDVLEA-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
A +R ++ HYR ++++ L +A L + I D A
Sbjct: 285 DAESVRYFLISGHYRSQLNYSEDNLKQARASLERLYTALRDVDISDAPIAKDNSHYQAFC 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGI------EVCK 398
A+ +D NT A+ L +LA+ K +L + ++LG+ + +
Sbjct: 345 KAMDDDFNTPEALAVLFELAKALNKAKLSADKSAPELALLLRTLGNVLGLLDQSADDFLQ 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE L+++R K ++SAD R QL + +LED G T W+
Sbjct: 405 GDESSAEVEKIELLIKQRNDARANKDWASADDARAQLSALNIVLED------GANGTTWR 458
Query: 459 QK 460
++
Sbjct: 459 KQ 460
>gi|226328546|ref|ZP_03804064.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
gi|225203279|gb|EEG85633.1| hypothetical protein PROPEN_02441 [Proteus penneri ATCC 35198]
Length = 463
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 260/483 (53%), Gaps = 49/483 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 61 --VNYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNIARPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIELTEALIKLGHAYVADNGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG+GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 NVKRNPMDFVLWKMSKPGEPSWESPWGKGRPGWHIECSAMNSKELGHHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R +L HYR +++T + L +A L + + + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDENAQPVGGEAFEAQFID 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L LARE + + L + A +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDLAREVNRLKAVDMNAANGLAAVLRKLAKVLGLLEQEPEHFLQS 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IE L+Q+R K K +++AD R L + G +LED G + T
Sbjct: 405 GAKADDASEVEKIELLIQQRNDARKNKDWAAADVARDALTAMGIVLED------GPQGTV 458
Query: 457 WKQ 459
W++
Sbjct: 459 WRR 461
>gi|163816509|ref|ZP_02207873.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
gi|158448209|gb|EDP25204.1| hypothetical protein COPEUT_02698 [Coprococcus eutactus ATCC 27759]
Length = 463
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 192/480 (40%), Positives = 253/480 (52%), Gaps = 49/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI NTL R+ EF+ I+ + +YVCGPTVYD+ HIGNARPMIVFD L R L Y E
Sbjct: 1 MKILNTLTRRKEEFKPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+RA E + I+ + + KD L T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKRANAEGVDASV------ISERYIAEVKKDMAALNVREATTHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT IP MI +++ +I +AYE N + F T +YG S++ ID+ + G R V
Sbjct: 113 ATEEIPDMIEMVKTLIEKDYAYEVNGTVYFRTRKFKDYGKLSKKNIDDLRSGNRDLLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK EP W SPWG GRPGWH+ECS MS Y+G V DIH GG DLI
Sbjct: 173 IDEKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHLECSVMSKKYIGDVIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HNGFL + KMSKS GNF T+ E+ E
Sbjct: 233 FPHHENEIAQSEAANGTE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------LLSKWPQTSTSKGIID------ 348
+P VIR ML HYR P++F+ + + ++ + + + G +D
Sbjct: 285 YPLQVIRFFMLSAHYRSPLNFSAELVEASKNGLERILTAVDRLKSINGIDGDVDKSVADE 344
Query: 349 -----PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILG 393
A+ +DLNT AI + +L + + N +L ILG
Sbjct: 345 MDAFVKKYEDAMDDDLNTADAISVIFELVKYANVNVTEESSKATVELVLNTIEKLCDILG 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
I E + + IE L++ER K K F+ AD IR QL S G ILED + +R
Sbjct: 405 IIT--EKKEEILDSDIEALIEERQAARKAKNFARADEIRDQLSSMGIILEDTREGVKWKR 462
>gi|222530216|ref|YP_002574098.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|254765173|sp|B9MMM6|SYC_ANATD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|222457063|gb|ACM61325.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 465
Score = 402 bits (1033), Expect = e-110, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 250/479 (52%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL EF+ ++ ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + Q++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGITVF------ELAERFIQEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTYANSCSKETLTFAKDTLKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV++R K K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYSAKEEAIPQQILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|229523866|ref|ZP_04413271.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
gi|229337447|gb|EEO02464.1| cysteinyl-tRNA synthetase [Vibrio cholerae bv. albensis VL426]
Length = 459
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRAAKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|322514668|ref|ZP_08067696.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
gi|322119366|gb|EFX91475.1| cysteine--tRNA ligase [Actinobacillus ureae ATCC 25976]
Length = 459
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 265/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVDRMIAEMHKDFDDLNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ +++ +I +GHAY A+++++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIVAMVEKLIANGHAYVAADDDVMFDVESFKKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W+SPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKEGEPSWQSPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSCCAHSGD-YVNYWLHTGMLTIDDEKMSKSLGNFFTIRTMLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
+ +R L HYR +++++ L A L + + A +
Sbjct: 285 ESETLRYFFLTAHYRSLLNYSLDNLDLARSALERLYTSLRGCDLSVQVAGSEQYVEAFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L ++ARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFEIAREVNKLKTEDMAKANGLAVRLKELAGVLGLLYQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEAKAAKNWAVADEVRDKLKAMNIVLEDTPN------GTMWRK 458
>gi|126697618|ref|YP_001086515.1| cysteinyl-tRNA synthetase [Clostridium difficile 630]
gi|122974209|sp|Q18CD5|SYC_CLOD6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 468
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 177/491 (36%), Positives = 258/491 (52%), Gaps = 57/491 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y
Sbjct: 1 MMSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV+N TD+DDKII R+ +E S + +K +++ D L T
Sbjct: 61 YD--VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+ T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 HPQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 NDQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ +
Sbjct: 233 FPHHENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKL 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------- 341
+ ++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 YDLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEV 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNAS 388
+ A+ +D+NT A+ + +LA+ N D L FN
Sbjct: 345 ELVKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNEL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 TGVLNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR-- 460
Query: 449 DNGQRMTRWKQ 459
+ +WK+
Sbjct: 461 ----QGVKWKR 467
>gi|312114423|ref|YP_004012019.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311219552|gb|ADP70920.1| cysteinyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 449
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 218/468 (46%), Positives = 282/468 (60%), Gaps = 34/468 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+K+YNT R+ F+ IDP +RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MKLKLYNTRTRRKELFRPIDPKAVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y RNITD+DDKI RA E S I +T + QF D + L PT +
Sbjct: 61 AEHVIYARNITDVDDKINARAAAEGVS------IRELTERTAAQFHADAAAIGALPPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI L++ ++ GHAY A ++F+ S +YG SRR +D+ + G RV
Sbjct: 115 PRATEHIAEMIALVERLVERGHAYAAEGHVLFNVPSDDDYGGLSRRSVDDMRAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S EPGWESPWG GRPGWH+ECSAM+ +LG VFDIHGGG+DL+F
Sbjct: 175 PYKRDPMDFVLWKPSEGAEPGWESPWGFGRPGWHLECSAMAEKHLGTVFDIHGGGIDLLF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA E AN W+HNG L +EG+KMSKS GNFITI +LL + W
Sbjct: 235 PHHENELAQSTCAHDTEVMANYWVHNGHLQVEGQKMSKSLGNFITIRDLL-------KDW 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
P VIRL ML THYR+P+D+T + L E++ +L +W + + D
Sbjct: 288 PGDVIRLNMLRTHYRQPMDWTAKGLAESDQMLRRWRTNLSHEASEDDLDSKDFAELEFFR 347
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE--VCKEHLNKNISIAIE 410
L +DLNT AI +HK+ K + +LG+ L IE
Sbjct: 348 RDLADDLNTPMAIAEIHKMGPSGRK---------FALDLLGLGEPAEDPRLMAVDETGIE 398
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ RL K K ++ AD IR +L + G L D KNP G+ T W+
Sbjct: 399 ARITARLAARKSKNWAEADRIRDELAAMGVALMDAKNPATGEIETTWE 446
>gi|296449821|ref|ZP_06891588.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296877885|ref|ZP_06901905.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
gi|296261308|gb|EFH08136.1| cysteine--tRNA ligase [Clostridium difficile NAP08]
gi|296431082|gb|EFH16909.1| cysteine--tRNA ligase [Clostridium difficile NAP07]
Length = 467
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 177/490 (36%), Positives = 258/490 (52%), Gaps = 57/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TD+DDKII R+ +E S + +K +++ D L T
Sbjct: 61 D--VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 PQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL F
Sbjct: 173 DQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 PHHENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 DLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVE 344
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
+ A+ +D+NT A+ + +LA+ N D L FN
Sbjct: 345 LVKELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELT 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 GVLNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR--- 459
Query: 450 NGQRMTRWKQ 459
+ +WK+
Sbjct: 460 ---QGVKWKR 466
>gi|163801179|ref|ZP_02195079.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
gi|159175528|gb|EDP60325.1| cysteinyl-tRNA synthetase [Vibrio sp. AND4]
Length = 460
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 251/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTDRLIGEMHVDFDSLNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATQFIAEIIELVEKLIERGFAYVADNGDVMFEVRQFKEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEDNLNQARASLERLYTSLRGLDSNAAPAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K +L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTENVEKASELGALMRELADVIGILHQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGDDEEVAEIEALIKLRNDSRAAKDWANADMARDKLTEMGIVLED------GSEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|237745445|ref|ZP_04575925.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229376796|gb|EEO26887.1| cysteinyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 462
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 187/480 (38%), Positives = 266/480 (55%), Gaps = 45/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L R F I+P +RMYVCG T+YD+ HIG+AR M+ FDV+YR L+ E
Sbjct: 3 SLQIYNSLTRSKQVFTPIEPGKVRMYVCGMTIYDYCHIGHARMMMSFDVVYRWLKALGYE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + ++IS +T++ TQ +DT+ L L P H+P
Sbjct: 63 --VTYVRNITDIDDKIINRAGENG------ESISSLTARFTQYMHEDTSALGILPPDHEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++P+M+ LI + +G AY+ + ++ + YG S + +D+ + G RV
Sbjct: 115 RATEYVPEMLELIAKLEKNGLAYQSEDGDVNYSVRDFRGYGKLSGKSLDDLRAGERVDVN 174
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP W S WG GRPGWHIECSAMSS LG FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKSAKPSEPDEAKWSSRWGAGRPGWHIECSAMSSKLLGDHFDIHGGGAD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 235 LQFPHHENEIAQSEGASG-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTIRDVL------- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+++ A V+R ++ +HYR P++++ L +A L++ + D
Sbjct: 287 KNYDAEVLRFFIIRSHYRSPLNYSDAHLDDARSALTRLYTALKDIDVQDKPVDWQEEHAV 346
Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH------- 400
A+ +D NT A+ L +LA E + H ++ A +LG+
Sbjct: 347 RFSRAMNDDFNTPEAVAVLFELANEVNRTHSVEVASQLKALGSVLGLLERDPRQFLQGNG 406
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++N IE +Q R K + F+ AD IR +L KG +LED T W++
Sbjct: 407 TVDENEEKWIEAQIQARREAKKTRDFAKADKIRNELLEKGIVLEDKPGGK-----TEWRR 461
>gi|83644974|ref|YP_433409.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
gi|109894904|sp|Q2SK40|SYC_HAHCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|83633017|gb|ABC28984.1| cysteinyl-tRNA synthetase [Hahella chejuensis KCTC 2396]
Length = 467
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 175/482 (36%), Positives = 255/482 (52%), Gaps = 48/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY++L ++ EF+ I + +YVCG TVYD+ H+G+AR ++ FD++ R LR +
Sbjct: 1 MLKIYSSLSQQKEEFKPIQAGKVGIYVCGMTVYDYCHLGHARVLVCFDIITRYLRAKGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKI+ RAR +++ +T++ +D L L+PT +P
Sbjct: 61 --VNYVRNITDVDDKILNRARDNG------ESVDALTARFIDAMHEDERALGVLSPTSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +IQ ++ G+AY +N ++ + +YG S++K+DE + G R+
Sbjct: 113 RATGHIDEIIAMIQRLMDKGYAYHASNGDVYYSVEQFADYGKLSKQKLDEIRAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF+LWK + P E W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL F
Sbjct: 173 AEKRSPADFVLWKAAKPGELSWDSPWGEGRPGWHIECSAMSTRCLGDTFDIHGGGPDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+H G + + KMSKS GNF TI E+L+ +
Sbjct: 233 PHHENEIAQSEAATGCK-YVNYWMHAGAVRVNKEKMSKSLGNFFTIREILD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------GIID 348
PA V+R + +HYR ID++ L EA L + + G
Sbjct: 285 PAEVVRYFLASSHYRSAIDYSDVALEEARSGLERLYNSIRELYGELGAVSMDEPLVGEYR 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-- 398
A+ +D NT SA+ L +A+ + L A +LG+
Sbjct: 345 ERFHQAMDDDFNTSSAVAVLFDMAKAVNVAKKEDRTRALSLAKGMVDLAEVLGLLQADPE 404
Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E + IE + +R K F+ +D IR L+ KG +L D + +
Sbjct: 405 SLMQGEGEEVGGLSVAEIEDFIAQRNAARANKDFAESDRIRDLLKEKGVLLNDSREGTSW 464
Query: 452 QR 453
QR
Sbjct: 465 QR 466
>gi|260589563|ref|ZP_05855476.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
gi|260540131|gb|EEX20700.1| cysteine--tRNA ligase [Blautia hansenii DSM 20583]
Length = 468
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 179/485 (36%), Positives = 254/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL +K EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R + Y E
Sbjct: 1 MRIYNTLTKKKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYMEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E S I+S+ ++ KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIAKAVEEGVSAE------EISSRYIKECKKDMADMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RVPE 181
AT I MI +IQ ++ G AYE N + F + YG S + +++ + G +V
Sbjct: 113 ATQEIDGMIDMIQTLMDKGFAYEVNGTVYFRVKNFKEYGKLSHKNLEDLQSGFRSLQVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W SPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 ENQKEDPLDFVLWKPKKEGEPFWVSPWSEGRPGWHIECSVMSKKYLGEEIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C + ++ A W+HN FLN++ RKMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSECCNG-KQFARYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ V+R ML HYR P++F+ + + ++ L +
Sbjct: 285 YDLQVLRFFMLNAHYRSPLNFSAELMEASKNSLERIITCVEQLKHLLETAEKTEMTAEEK 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+++ +D NT AI A+ +L + + + L
Sbjct: 345 ALEAEVLEYVKKYENSMEDDFNTADAIAAIFELVKFANTKANENSTAAFVQYLFDTIVHL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LG+ V KE + + IEKL++ER + K K F AD IR +L + G IL+D +
Sbjct: 405 SDVLGLIVNKEA--EILDEEIEKLIEERQMARKEKNFKRADEIRDELATMGIILKDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VQWKR 467
>gi|255099211|ref|ZP_05328188.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255304994|ref|ZP_05349166.1| cysteinyl-tRNA synthetase [Clostridium difficile ATCC 43255]
gi|328887507|emb|CAJ66866.2| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Clostridium difficile]
Length = 465
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 258/488 (52%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y +
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N TD+DDKII R+ +E S + +K +++ D L T P+
Sbjct: 60 -VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 HENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +D+NT A+ + +LA+ N D L FN +
Sbjct: 345 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 LNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457
Query: 452 QRMTRWKQ 459
+ +WK+
Sbjct: 458 -QGVKWKR 464
>gi|197120161|ref|YP_002140588.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|226710842|sp|B5EEK6|SYC_GEOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|197089521|gb|ACH40792.1| cysteinyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 480
Score = 402 bits (1032), Expect = e-110, Method: Composition-based stats.
Identities = 193/502 (38%), Positives = 261/502 (51%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL EF I+P + MYVCG TVYD HIG+AR +VFD++YR LR
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLRSKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TDIDDKII RA ++ + I+ + ++F D RL PT Q
Sbjct: 61 E--VTYVRNYTDIDDKIINRANRDGV------PYNEISERFIKEFDNDMARLMLQLPTFQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HIP++I L+Q +I G AY++ +++ + Y S+R +++ + G R+
Sbjct: 113 PKATEHIPEIIALVQTLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+ DIHGGG DLIF
Sbjct: 173 ERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI E+LE+ +
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------TSTSKGIIDPA 350
A V+R +L HYR PIDF+ Q L EAE+ L + + +T G +
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIYERLASGANTPAGADNAE 344
Query: 351 VLSA-----------LYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
+ + +D NT A+ L L R + A
Sbjct: 345 FVEKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEQAKAEVAKMAA 404
Query: 391 ILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LG ++ K+ +I IE L+ ER K K F D IR L K
Sbjct: 405 VLGICDSVPAAFLQRMKDRKTSDIEMSAEEIEALIAERAEARKAKNFKRGDEIRDLLLEK 464
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
+L D + T WK K
Sbjct: 465 NIVLLDS------AQGTTWKVK 480
>gi|255654140|ref|ZP_05399549.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-23m63]
Length = 465
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 258/488 (52%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y +
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N TD+DDKII R+ +E S + +K +++ D L T P+
Sbjct: 60 -VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 HENEIAQSEARSG-KTFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +D+NT A+ + +LA+ N D L FN +
Sbjct: 345 KELDGFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 LNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457
Query: 452 QRMTRWKQ 459
+ +WK+
Sbjct: 458 -QGVKWKR 464
>gi|290476082|ref|YP_003468980.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
gi|289175413|emb|CBJ82216.1| cysteine tRNA synthetase [Xenorhabdus bovienii SS-2004]
Length = 460
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 179/482 (37%), Positives = 254/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLSRQKEEFKPIHEGKVGMYVCGITIYDLCHIGHGRTFVAFDVIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRN+TD+DDKII+RA + N++ +T++ + D L P +P
Sbjct: 61 L--TYVRNVTDVDDKIIKRATEN------NESCDALTTRMLSEMHSDFDALNIQRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I + + +I GHAY N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATQHISEIIQITEELINRGHAYVADNGDVMFSIDTNPDYGLLSRQDLEQLQAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWESPWGVGRPGWHIECSAMNGKQLGQHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHG-GPYVNYWMHSGMVMVDKEKMSKSLSNFFTIRDVLG-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR +++T + L +A L + T +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTALRGTDKSAQPTGSEAFEARFTE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L A ILG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDIAREINCLKTENLAAANGLAAELRKLAGILGLLEQEPEQFLQG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE L+++R K+++ AD R QL + LED G + T W+
Sbjct: 405 GAHVDDDVAQIEALIKQRNDARTNKEWALADAARDQLNAMRIELED------GPQGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|260681821|ref|YP_003213106.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260685418|ref|YP_003216551.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
gi|260207984|emb|CBA60138.1| cysteinyl-tRNA synthetase [Clostridium difficile CD196]
gi|260211434|emb|CBE01534.1| cysteinyl-tRNA synthetase [Clostridium difficile R20291]
Length = 467
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 177/490 (36%), Positives = 258/490 (52%), Gaps = 57/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y
Sbjct: 1 MSVKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TD+DDKII R+ +E S + +K +++ D L T
Sbjct: 61 D--VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 PQVTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL F
Sbjct: 173 DQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 PHHENEIAQSEARSG-KIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------- 341
++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 DLEIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVE 344
Query: 342 --TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
+ A+ +D+NT A+ + +LA+ N D L FN
Sbjct: 345 LVKELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELT 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 GVLNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR--- 459
Query: 450 NGQRMTRWKQ 459
+ +WK+
Sbjct: 460 ---QGVKWKR 466
>gi|260779213|ref|ZP_05888105.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
gi|260605377|gb|EEX31672.1| cysteinyl-tRNA synthetase [Vibrio coralliilyticus ATCC BAA-450]
Length = 460
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 176/482 (36%), Positives = 253/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I+ + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPINAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRANENG------ESCDSLTERLIGEMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATEFIAEIIELVEKLIERGFAYVADNGDVMFEVGQFDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 SAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLTVPAAGGEEYVKRFTE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRIKNDNLEQASAMGSLMRELADVIGILHQEPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEGLIKLRNDSRASKDWANADMARDKLTEMGIVLED------GPEGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|187932481|ref|YP_001884454.1| cysteinyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|229558625|sp|B2TIF6|SYC_CLOBB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187720634|gb|ACD21855.1| cysteine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 470
Score = 401 bits (1031), Expect = e-110, Method: Composition-based stats.
Identities = 165/490 (33%), Positives = 255/490 (52%), Gaps = 57/490 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL RK EF I P ++MYVCGPTVY+F HIGN R IVFD + R L Y E
Sbjct: 1 MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I++A +E ++ I K +++ +D +L T PR
Sbjct: 60 -VKFVQNFTDIDDKMIKKANEEGTTV------KEIGDKYIKEYYEDADKLQIERATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
AT +I +I + +I G+AYE ++ F+T +YG S + I++ +M T
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSI 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF +WK P EP W+ PWG GRPGWHIECS M+ LG DIH GG+DL
Sbjct: 173 ADERKNDPMDFAIWKAQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE+AQS + + AN W+H+ ++N+ +KMSKS NF T ++L +
Sbjct: 233 TFPHHENEVAQSEALTGM-RFANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
+ + V+R M+ HYR I+F+ L A+ + + + +
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENISEEE 344
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---LPIFNASAHI--- 391
+ + +D NT A+ L +L +++ N ++ + N + ++
Sbjct: 345 VNYLNSLKKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALNLIRE 404
Query: 392 LG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
LG + + ++ ++ IE L+Q+R K K F+ +D IR L+ +G +LED
Sbjct: 405 LGAPLGLLQKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLEDT---- 460
Query: 450 NGQRMTRWKQ 459
+ RWK+
Sbjct: 461 --PQGVRWKK 468
>gi|118442910|ref|YP_877177.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
gi|187629804|sp|A0PXS5|SYC_CLONN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118133366|gb|ABK60410.1| cysteinyl-tRNA synthetase [Clostridium novyi NT]
Length = 466
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 168/489 (34%), Positives = 250/489 (51%), Gaps = 57/489 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ R+ EF+ I + MYVCGPTVY++ HIGN R +VFD + R Y
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I++A +E N + + + ++ KD L T PR
Sbjct: 59 KVNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIHEYYKDADGLNIKRATANPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT ++ ++I ++++I G+AYE N ++ F T YG S + +D+ + G R+
Sbjct: 113 ATEYMDEIIQFVKDLIDKGYAYEVNGDVYFSTKQFKEYGKLSGQNLDDLQAGARISVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP W PWG+GRPGWHIECS M+ LG DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWNCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + AN W+H+ +LN+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARNG-KTFANYWMHSAYLNINNKKMSKSLNNFFTTREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
VIRL ML HYR P++F+ L A+ +
Sbjct: 285 EVIRLFMLSAHYRTPLNFSDDLLQSAKASNERLYNAIGNLERLLDEVKVDKVTENEKEYV 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + + +D NT AI + L ++ N + L +
Sbjct: 345 KNLESYKEKYIEKMDDDFNTADAISVIFDLVKDINTNINTESSKELVEYSLELIRELGKP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI L +++ IEKL+++R K K ++ AD IR L+++G +LED
Sbjct: 405 LGILQKSTML--DLNAEIEKLIEQRQQARKDKDWALADKIRDDLKARGIVLEDT------ 456
Query: 452 QRMTRWKQK 460
+ RWK++
Sbjct: 457 PQGVRWKRE 465
>gi|188590724|ref|YP_001919652.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|251778988|ref|ZP_04821908.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|229558624|sp|B2UY90|SYC_CLOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|188501005|gb|ACD54141.1| cysteinyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|243083303|gb|EES49193.1| cysteine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 470
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 165/492 (33%), Positives = 251/492 (51%), Gaps = 61/492 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL RK EF I P ++MYVCGPTVY+F HIGN R IVFD + R L Y +
Sbjct: 1 MRIFNTLTRKKEEFIPITPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I++A +E ++ I K +++ +D +L T PR
Sbjct: 60 -VKFVQNFTDIDDKMIKKANEEGTTV------KEIGDKYIKEYYEDADKLQIERATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
AT +I +I + +I G+AYE ++ F+T +YG S + I++ +M T
Sbjct: 113 ATEYIEDIIDFVAQLIEKGYAYEVEGDVYFNTKKFNDYGKLSGQSIEDLQMGASNRTSSV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KK+P DF +WK P EP W+ PWG GRPGWHIECS M+ LG DIH GG+DL
Sbjct: 173 ADERKKDPMDFAIWKSQKPGEPAWKCPWGMGRPGWHIECSCMAKKILGDTIDIHAGGMDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE+AQS ++ AN W+H+ ++N+ +KMSKS NF T ++L +
Sbjct: 233 TFPHHENEVAQSEALTGVQ-FANYWMHSAYVNINNQKMSKSLNNFFTARDIL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
+ + V+R M+ HYR I+F+ L A+ + + + +
Sbjct: 285 EYDSDVVRFFMMSAHYRLQINFSKDLLDSAKASVERLYNAIGNLENLIDEVSRENMNEEE 344
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNA 387
+ + +D NT A+ L +L +++ N + L +
Sbjct: 345 VRYLNSLNKYREKYIEKMDDDFNTADALTVLFELTKDTNTNINVNSSKELVNKALDLIRE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
LG+ ++ ++ IE L+Q+R K K F+ +D IR L+ +G +LED
Sbjct: 405 LGAPLGLL--QKITKGSLEDEIESLIQQRQDARKNKDFALSDKIRDDLKDRGIVLEDT-- 460
Query: 448 PDNGQRMTRWKQ 459
+ RWK+
Sbjct: 461 ----PQGVRWKK 468
>gi|254973704|ref|ZP_05270176.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255091094|ref|ZP_05320572.1| cysteinyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255312749|ref|ZP_05354332.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255515509|ref|ZP_05383185.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255648602|ref|ZP_05395504.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|306518726|ref|ZP_07405073.1| cysteinyl-tRNA synthetase [Clostridium difficile QCD-32g58]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 258/488 (52%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R EF ++ ++MYVCGPTVY++ HIGNARP I+FD L R L Y +
Sbjct: 1 MKVYNTLTRTKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPFIIFDTLRRYLEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N TD+DDKII R+ +E S + +K +++ D L T P+
Sbjct: 60 -VTYVQNFTDVDDKIINRSHEEGIS------PEEVAAKYIKEYFVDCDGLGIKRATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T++I Q+I I+ + G+AY N ++ FDT+ YG S +K ++ + G R+
Sbjct: 113 VTDNIQQIIEFIKELEDKGYAYAVNGDVYFDTNKFEGYGKLSGQKQEDLEAGARIEVNDQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG+ DIH GG DL FPH
Sbjct: 173 KRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLGETIDIHAGGQDLTFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + W+HNG++N+ KMSKS GNF T+ ++ + +
Sbjct: 233 HENEIAQSEARSG-KIFSKYWMHNGYININDEKMSKSKGNFFTVRDI-------SKLYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
++R ML HYR P++F+ + L +A+ L + T
Sbjct: 285 EIVRFFMLSAHYRNPVNFSDEMLNQAKAGLERLYNTKEKLEFTLSNLVESPLTEKEVELV 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +D+NT A+ + +LA+ N D L FN +
Sbjct: 345 KELDDFRQKFIDAMDDDVNTADAVSVIFELAKLINSNVDENSSLEFAKKCLDEFNELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I + + + IE+L+Q+R K K+F AD IR+QL G +LED +
Sbjct: 405 LNI--VNKKKDTVLDKDIEELIQKRTDAKKNKEFQLADDIRQQLLDMGIVLEDTR----- 457
Query: 452 QRMTRWKQ 459
+ +WK+
Sbjct: 458 -QGVKWKR 464
>gi|168181842|ref|ZP_02616506.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|237796964|ref|YP_002864516.1| cysteinyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|259511826|sp|C3KVS3|SYC_CLOB6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|182674897|gb|EDT86858.1| cysteine--tRNA ligase [Clostridium botulinum Bf]
gi|229261308|gb|ACQ52341.1| cysteine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 465
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 171/487 (35%), Positives = 254/487 (52%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLPLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I++A +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKKANEEGTTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMKEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPEEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEGLRDEELKYR 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L +
Sbjct: 345 DELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNITIESSKELVKYALDLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI ++ ++ IE+L+QER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGIL--QKSTKASLEEEIERLIQERQKARKEKDWALADKIRDDLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|332532274|ref|ZP_08408155.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
gi|332038372|gb|EGI74817.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis ANT/505]
Length = 459
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 172/477 (36%), Positives = 257/477 (53%), Gaps = 46/477 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R+ +F+ + I MYVCG T+YD+ HIG+AR + FDV+ R LR+ +
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL-- 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITDIDDKII+RA + ++I+ +T + T+ +D L L P +P T
Sbjct: 62 KYVRNITDIDDKIIKRANENG------ESINDLTVRMTKAMHEDFDSLNMLRPDIEPTVT 115
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+H+ ++I +++ +I GHAY A+ +++FD S+ YG+ S++ + + G+RV K
Sbjct: 116 SHMDEIIAMVKRLIEKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDK 175
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+P DF+LWK++ EP W SPWG GRPGWHIECS MSS +LG+ FDIHGGG DL FPHH
Sbjct: 176 DDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSVMSSKHLGEHFDIHGGGSDLQFPHH 235
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQSCCA+ + N WIH G + + KMSKS NF T+ E+L +++ A
Sbjct: 236 ENEIAQSCCANNGK-YVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KAYDAE 287
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSALY 356
+R ++ HYR ++++ + L +A L + A+
Sbjct: 288 SVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVVPVECDLEGNEFVAKFRKAMN 347
Query: 357 NDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------N 402
+D NT A+ L +LA+E + + L I + +LG+ +
Sbjct: 348 DDFNTPEALPVLFELAKELNRVKESDAGQAGKLAFILRSLGEVLGVAQQAPEAFLQGGQD 407
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+ +R K +++AD R L + G ILED T W++
Sbjct: 408 DDEVATIEALIVKRNEARASKDWAAADEARDALNALGVILEDS------AGKTTWRK 458
>gi|167765721|ref|ZP_02437774.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
gi|167712594|gb|EDS23173.1| hypothetical protein CLOSS21_00209 [Clostridium sp. SS2/1]
gi|291559857|emb|CBL38657.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SSC/2]
Length = 467
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 193/484 (39%), Positives = 257/484 (53%), Gaps = 53/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ EF + P + MYVCGPTVY++ HIGNARPMI+FD + R Y E
Sbjct: 1 MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I + ++ +D L THQPR
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVTAT------EIAERYIKECKQDMEALNIKPATHQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +IQ +I GHAYE + + F T S +YG S++ ID+ + G R V
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK E W+SPWG GRPGWHIECS MS Y+G DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + EK AN W+HNGFLN+ +KMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTV-----------------------QRLTEAEILLSKWP 338
+P VIR ML HYR P++F+ E L +
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMSAKEETGSLSKEET 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
+ + ++ A+ +D NT A+ A+ ++ RES +L +
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGIE KE + I KL++ER K K F+ AD IR QL +G +L+D +
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGV 462
Query: 450 NGQR 453
R
Sbjct: 463 KWSR 466
>gi|117921105|ref|YP_870297.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
gi|166225306|sp|A0KYM2|SYC_SHESA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|117613437|gb|ABK48891.1| cysteinyl-tRNA synthetase [Shewanella sp. ANA-3]
Length = 461
Score = 401 bits (1031), Expect = e-109, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 254/483 (52%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN++ R+ EF+ I P + MYVCG TVYD HIG+ R + FD++ R LRY
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V + RNITDIDDKII+RA + + + +T + + KD L + P
Sbjct: 61 YE--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDF 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I +++ ++ GHAY A+ +++F +S P YG S + +++ + G RV
Sbjct: 113 EPRATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL
Sbjct: 173 VDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 QFPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAV 351
+ A +R +L HYR I+++ + L +A L +
Sbjct: 285 HYDAETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVTAAPAEEFVAKF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VC 397
+A+ +D NT A L + RE + + A +LG+
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFF 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + + IE L+ ER K + +AD R +L G +LED G T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARAEKDWPAADVARNRLNELGVVLED------GPSGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RKK 461
>gi|126173835|ref|YP_001049984.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
gi|187631633|sp|A3D302|SYC_SHEB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|125997040|gb|ABN61115.1| cysteinyl-tRNA synthetase [Shewanella baltica OS155]
Length = 459
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPITPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYAGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHQDFDALNMLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 RATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ETKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFVAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L + RE + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKLTDMAQASALAVTLKQLADVLGLLSQEPEAFFQG 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R L G LED G T W++
Sbjct: 405 GGSYDEVAEIEALIVERNRARTEKDWAAADVARNCLNELGVELED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|153855861|ref|ZP_01996836.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
gi|149751829|gb|EDM61760.1| hypothetical protein DORLON_02858 [Dorea longicatena DSM 13814]
Length = 468
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 179/485 (36%), Positives = 251/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NT+ +K EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTMTKKKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVTA------DEISKRYIAECKKDMDGMNIKPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +IQ +I G AYE N + + T +YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVDMIQTLIDKGFAYEKNGTVYYSTRKFKDYGKLSHKNLDDLRSGERSLLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKSLGNFRTVREI-------SEQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ V+R ML HYR P++F+ + ++ L + + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIVNAADNLKFLMENAKAEAITDAEA 344
Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT A+ A+ L + D L +
Sbjct: 345 ENFAKTEEFVAGFEKAMDDDFNTADAVAAIFDLVKYINTTTDAESSKEYLQKLFDLLVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+ V K+ + + IEKL++ER K K F+ AD IR +L KG IL+D +
Sbjct: 405 TGVLGLIVDKKE--EILDEDIEKLIEERQAARKAKDFARADAIRDELLEKGIILKDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VQWKR 467
>gi|146292587|ref|YP_001183011.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
gi|166225305|sp|A4Y5H9|SYC_SHEPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145564277|gb|ABP75212.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens CN-32]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 180/483 (37%), Positives = 258/483 (53%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN++ R+ EF+ I+P I MYVCG T+YD HIG+ R + FD++ R LRY
Sbjct: 1 MPMLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V + RNITD+DDKII+RA + N++ +T + + +D L L P
Sbjct: 61 YE--VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDF 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 EPRATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL
Sbjct: 173 VDENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 QFPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAV 351
+ A +R +L HYR ++++ L +A L +
Sbjct: 285 HYDAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIVKF 344
Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VC 397
+A+ +D NT A L + R+ K L A +LG+
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFF 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + + IE L+ ER K +++AD R +L+ G +LED G T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARSEKDWAAADVARNRLDILGVVLED------GPSGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RKK 461
>gi|331090783|ref|ZP_08339630.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
gi|330399891|gb|EGG79550.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 2_1_46FAA]
Length = 468
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 179/485 (36%), Positives = 248/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ EF ++ ++MYVCGPTVY+ HIGNARPMIVFD + R Y E
Sbjct: 1 MKVYNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E S + I+ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAIEEGVSA------NEISQRYIAECKKDMEGMNVKPATKHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I ++I G+AYE N + F T YG S + +D+ + G R V
Sbjct: 113 ATEEICGMIEMISDLIDKGYAYEKNGTVYFRTRKFEEYGKLSHKNLDDLQSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++ DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL+
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWESPWCDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HN FLN++ KMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWLHNAFLNIDNHKMSKSLGNFRTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
+ V+R ML HYR P++F+ + + L +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAALMESSANGLERILTAVANLKHLLGVVSEENMTAEER 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
+ A A+ +D NT AI ++ L + + L +
Sbjct: 345 EQVKETENFVRAYEEAMEDDFNTADAIASIFDLVKFANTTTSAQSSKEYLQTLYDLIVKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LG+ V KE + ++ IE L++ER K + F AD IR +L KG ILED +
Sbjct: 405 SDVLGLIVEKEE--EMLAEDIEALIEERQAARKERNFQRADEIRDELLKKGIILEDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VKWKK 467
>gi|117923730|ref|YP_864347.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
gi|187629846|sp|A0L4P8|SYC_MAGSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|117607486|gb|ABK42941.1| cysteinyl-tRNA synthetase [Magnetococcus sp. MC-1]
Length = 490
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 191/503 (37%), Positives = 255/503 (50%), Gaps = 69/503 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYNTL RK F + P + MYVCG TVYD++HIG+AR M+VFDV+ R LR +
Sbjct: 10 ITIYNTLGRKKEPFVPMIPGKVGMYVCGVTVYDYSHIGHARVMVVFDVIARHLRVTGFDL 69
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
TYVRN TDIDDKII+RA + ++I +T + F +D L +P+
Sbjct: 70 --TYVRNFTDIDDKIIKRANERG------ESIQTLTQRYIDAFHQDMAALGVQPADIEPK 121
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+P+M+ +I ++ G AY + ++ + NYG S + +DEQ+ G RV +
Sbjct: 122 ATEHLPEMMQMIGTLMDKGVAYASGGDVYYAVERFANYGQLSGKVLDEQEAGARVEVDSN 181
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK + P EP W+SPWG GRPGWHIECSAM + YLG FDIHGGG DLIFPH
Sbjct: 182 KQNPMDFVLWKGAKPEEPQWDSPWGAGRPGWHIECSAMGTKYLGASFDIHGGGRDLIFPH 241
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETKKFGG 299
HENEIAQ+ N WIHNGF+N+ E KMSKS GNF TI +LL
Sbjct: 242 HENEIAQTEGCTGQH-AVNYWIHNGFVNVVNEEGESEKMSKSLGNFHTIRDLLAL----- 295
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
+P V+R +L +HYR P+DF+ L A+ L + S
Sbjct: 296 --YPGEVLRFFILNSHYRSPLDFSFSLLEAAKAGLDRIYTALRSAQALLGKLPGTPIGEP 353
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFN 386
+ L A+ +D NT AI L + A+ +
Sbjct: 354 ADVPAGAPQDLVENYLKAMDDDFNTPQAIAFLFEAAKMLNTAISEQKDPAVIATWARLIR 413
Query: 387 ASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
H LG+ L + AIE L+ ER K ++ +D IR L
Sbjct: 414 GLGHHLGLAGQDPELWFRSGIGAEQGLQAEAIEALIAERSAARAAKNWAESDRIRDTLAQ 473
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G +LED GQ T+W +K
Sbjct: 474 QGIVLED------GQHGTQWSRK 490
>gi|260768877|ref|ZP_05877811.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|260616907|gb|EEX42092.1| cysteinyl-tRNA synthetase [Vibrio furnissii CIP 102972]
gi|315180571|gb|ADT87485.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [Vibrio
furnissii NCTC 11218]
Length = 460
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 180/482 (37%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPITAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENQ------ESCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L+Q +I G AY N +++F+ + +YG S++ +D+ + G RV
Sbjct: 113 RATAYIQEIIELVQRLIDRGFAYVADNGDVMFEVNKFDDYGKLSKQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 MAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLS 353
A +R ++ HYR ++++ + L +A L + + + P +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDMTVPAAGGEEYLTRFTT 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K L + A ++GI
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKTEDTDKASALGALMRELADVIGILYQDPEAFLKG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
N + IE L++ R K +++AD R +L G +LED G T W+
Sbjct: 405 DAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLNEMGIVLED------GPSGTTWR 458
Query: 459 QK 460
+K
Sbjct: 459 RK 460
>gi|258621406|ref|ZP_05716440.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|262171188|ref|ZP_06038866.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
gi|258586794|gb|EEW11509.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM573]
gi|261892264|gb|EEY38250.1| cysteinyl-tRNA synthetase [Vibrio mimicus MB-451]
Length = 459
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 176/481 (36%), Positives = 252/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L+Q +I G AY N +++F+ YG S++ +++ + G RV +
Sbjct: 113 RATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYLSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|89093601|ref|ZP_01166548.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
gi|89081997|gb|EAR61222.1| Cysteinyl-tRNA synthetase, class Ia [Oceanospirillum sp. MED92]
Length = 461
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 178/475 (37%), Positives = 254/475 (53%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL ++ + F I+ I+MYVCG TVYD HIG+AR M+ FDV+ R +R +
Sbjct: 1 MLQIYNTLTKEKSPFTPIEEGKIKMYVCGVTVYDLCHIGHARVMVAFDVITRFMRSQGWD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII+RA + + +T + +D RL+ L PT +P
Sbjct: 61 --VDYVRNITDVDDKIIKRAAENG------EEPHELTERMIAAMHEDEARLSVLRPTQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +I L++ +I G AY AN ++ + +YG + + +DE K G R+ +
Sbjct: 113 RATAHIGDIISLVETLIEKGFAYPAANGDVYYRVEKFADYGKLTNKNVDELKTGARIEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W+SPWG+GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 173 EAKESPLDFVLWKSAKEGEVSWDSPWGKGRPGWHIECSAMSKCCLGNTFDIHGGGPDLPF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+H G + + KMSKS GNF TI ++LE +
Sbjct: 233 PHHENEIAQSEAANGC-TYVNTWMHAGPVRVNSEKMSKSLGNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
A V+R + HYR ID++ L EA ++L ++ Q + + ++A
Sbjct: 285 NAEVVRFFLARVHYRTYIDYSEDSLKEARVMLERFYQALRGVDAVEGPLENDFEERFIAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVC--------K 398
+ +D NT A+ + +L E K L +LG+ +
Sbjct: 345 MNDDFNTPKAVSVMFELVNELNKATREGASEAPALAAQLRKLGGMLGLLQQNADEFLQGE 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L+ +R K K F+ AD IR L S+G IL+D + + R
Sbjct: 405 SEEGGLSNEEIEQLIVDRAEAKKAKNFAEADKIRDDLASQGIILKDSREGTSWFR 459
>gi|114330220|ref|YP_746442.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122314719|sp|Q0AJJ4|SYC_NITEC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|114307234|gb|ABI58477.1| cysteinyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 467
Score = 401 bits (1030), Expect = e-109, Method: Composition-based stats.
Identities = 183/489 (37%), Positives = 264/489 (53%), Gaps = 54/489 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+TL R EF + P ++MYVCG TVYD H+G+AR ++VFD + R L+ E
Sbjct: 1 MLKIYDTLTRSRREFIPLTPGKVKMYVCGMTVYDHCHLGHARVLVVFDSVVRWLQTLDYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + H + +T++ Q +D L ++P+ +P
Sbjct: 61 --VTYVRNITDIDDKIIRRALENH------EPFGALTARYIQAMEEDAAALGIISPSFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I M+ +I++++ G AY N ++ +D P YG S + +D+ + G RV
Sbjct: 113 RATECIESMVTMIESLLSKGLAYVANNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG+ FDIHGGG DL F
Sbjct: 173 TNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSGHYLGERFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS N W+HNGF+ ++ KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEGVHG-HPHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLAR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STS 343
V+R ++ HYR P++++ L +A L +
Sbjct: 285 QPEVVRFFIVRAHYRSPLNYSDAHLNDARNALERLYTALKNHAPSQAQAAEEATATIDWV 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK--- 398
++A+ +D NT A+ L LA E+ + + + A ILG+
Sbjct: 345 NDGYAQRFMAAMNDDFNTPEAVAVLFDLASEANRTGNSHYASLLKALGGILGLLQQSPRQ 404
Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + IE+++Q+RL K K F+ AD +R+QL G ILED G
Sbjct: 405 YLQHPAHPQNDHHSIEEIERMIQQRLQARKEKNFAQADALRQQLAEAGIILED------G 458
Query: 452 QRMTRWKQK 460
+ T W+++
Sbjct: 459 PQGTTWRRQ 467
>gi|153830573|ref|ZP_01983240.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|229520308|ref|ZP_04409734.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
gi|229529129|ref|ZP_04418519.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|254292163|ref|ZP_04962934.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|148873935|gb|EDL72070.1| cysteinyl-tRNA synthetase [Vibrio cholerae 623-39]
gi|150421926|gb|EDN13902.1| cysteinyl-tRNA synthetase [Vibrio cholerae AM-19226]
gi|229332903|gb|EEN98389.1| cysteinyl-tRNA synthetase [Vibrio cholerae 12129(1)]
gi|229342674|gb|EEO07666.1| cysteinyl-tRNA synthetase [Vibrio cholerae TM 11079-80]
Length = 459
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|219870367|ref|YP_002474742.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
gi|254781682|sp|B8F392|SYC_HAEPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219690571|gb|ACL31794.1| cysteinyl-tRNA synthetase [Haemophilus parasuis SH0165]
Length = 459
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 177/480 (36%), Positives = 255/480 (53%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I P ++ MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPIHPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+R+ + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRSLEN------NETCDQLVDRMIIEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ ++ GHAY + +++F+ S YG+ SR+ +++ + G RV K
Sbjct: 113 RATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W+SPWG+GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 SVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L + KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHG-DDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------NKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQR----LTEAEILLSKWPQTSTSKGIIDPAVL-----S 353
+R L YR +D++ + E L + + +++
Sbjct: 285 DCESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELVENDQYVTAFKE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
++ +D NT A+ L +LARE K + L A +LG+
Sbjct: 345 SMDDDFNTPGALAVLFELAREVNKLKAENQAEANKLAARLKQLAGVLGLLEQDPETFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE +++R K ++ AD R +L + G +LED N T W++
Sbjct: 405 DANNDEVAEIEAFIKQRNEARASKNWAVADEARNKLTAMGIVLEDGAN------GTTWRR 458
>gi|260655864|ref|ZP_05861333.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|260629480|gb|EEX47674.1| cysteine--tRNA ligase [Jonquetella anthropi E3_33 E1]
Length = 467
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 170/490 (34%), Positives = 249/490 (50%), Gaps = 56/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN L R F + + Y CGPTVYD+ HIGNARP IVFDVL R L Y
Sbjct: 1 MALSLYNDLTRNKELFVPLADGKVSFYSCGPTVYDYFHIGNARPFIVFDVLRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V+N TDIDDK+I+RA ++ ++ + + K + +D L ++
Sbjct: 61 Q--VTFVQNFTDIDDKMIDRANRDGITV------AQLAEKTIADYYEDADALGIKRASYN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT ++PQ+I L+Q +I GHAY + FD S P YG S++ +DE G R+
Sbjct: 113 PRATEYMPQIIQLVQKLIDRGHAYAVGGTVYFDVKSFPQYGRLSKQNMDELLAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK P DF+LWK P EP W+SPWG+GRPGWHIECS MS+ LG DIH GG+DL F
Sbjct: 173 DAKKCPLDFVLWKPQKPGEPAWDSPWGKGRPGWHIECSVMSTALLGDTIDIHSGGVDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A + N W+HN ++ ++ KMSKS GNF+T E + +
Sbjct: 233 PHHENEIAQAEAATG-KPFVNFWLHNEYILIDKEKMSKSLGNFLTARE-------ARKHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
IR ML HYR P++F+ + L +A ++ + +
Sbjct: 285 SPLAIRAFMLSAHYRSPVNFSPEGLEQAGAMVERLRNCWSDLQFAKSRRDLSYDDASLSE 344
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAH 390
A+ +D NT A+ A+ ++ + + D F
Sbjct: 345 AVRQGREDFEEAMDDDFNTAGALGAVFEVVKAVNTHLKSSGALSGKGLDDAEKFFRDIEE 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++G+ + I+ LV++R K K F+ +D +R +L ++G +LED
Sbjct: 405 VMGLLGLSHETDG--DAEIDALVEQRNAARKAKNFAESDRLRDELAARGIVLEDT----- 457
Query: 451 GQRMTRWKQK 460
+ T+WK+K
Sbjct: 458 -PQGTKWKRK 466
>gi|147676630|ref|YP_001210845.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|187629838|sp|A5D5M0|SYC_PELTS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146272727|dbj|BAF58476.1| cysteinyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 484
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 177/505 (35%), Positives = 252/505 (49%), Gaps = 71/505 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ FQ +P + MYVCGPT Y++ H+GNARP++ FD + R L + E
Sbjct: 1 MEIYNTLTRRKENFQPREPGRVCMYVCGPTTYNYIHLGNARPLVFFDTVRRYLIHKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII RA++E D + + ++ KD L P
Sbjct: 60 -VLFVQNFTDVDDKIINRAQEEG------DDPLALARRYIGEYFKDADALNVRRADRHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ HIP +I ++ ++ G AY + + F+ YG S R +++ + G RV
Sbjct: 113 VSEHIPDIIKMVDELVKKGAAYVVDGNVYFEVRKFAGYGKLSGRTLEDMQAGARVEVDPR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS YLG FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPCWDSPWGPGRPGWHIECSAMSLKYLGTNFDIHGGGYDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + W+HNGF+ + KMSKS GNF + ++L +P
Sbjct: 233 HENEIAQSEAATG-QPFVRYWMHNGFITVNEEKMSKSLGNFFLVRDILA-------KFPP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTSTS 343
++R +L THYR P+DF +++ A L + +
Sbjct: 285 ELVRFFLLSTHYRSPLDFDGEKMAAAGRGLERIKTSLRLLYEALERPVSEGVQAVCSRDP 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNA 387
I + +A+ +D NT AI A+ LARE+ L +FN
Sbjct: 345 FDEIRASFEAAMDDDFNTALAIGAVFDLAREANTAVQRTGPAVSGQDRQILQYALDLFNE 404
Query: 388 SAHILGIEVCK--------EHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQL 435
+LGI + + S +E L+ + R K K +S+AD IR L
Sbjct: 405 FNEVLGIFKVDGASGRLLIDGAAGDDSGLVEGLINLILEVRQEARKRKDWSTADRIRDGL 464
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
+ G +LED + RWK++
Sbjct: 465 KELGILLEDT------PQGVRWKKQ 483
>gi|297537709|ref|YP_003673478.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
gi|297257056|gb|ADI28901.1| cysteinyl-tRNA synthetase [Methylotenera sp. 301]
Length = 469
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 185/489 (37%), Positives = 263/489 (53%), Gaps = 54/489 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ F I + MYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MLKIYNTLAREKQTFTPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVSRWLRSSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + + I +T + + +D+ +L + P +P
Sbjct: 60 -AVTYVRNITDIDDKIIKRANENG------ETIGQLTQRFIEAMDEDSAKLGIIRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT I MI +I +I G AY AN ++ + ++ YG S + +++ + G RV
Sbjct: 113 KATEFIDGMIQMISALIEKGFAYVAANGDVFYSVNNFEGYGKLSGKSLEDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGR-----PGWHIECSAMSSHYLGKVFDIHGGG 237
HKK+P DF+LWK P EP W+SP+G PGWHIECSAMSSH+LG+ FDIHGGG
Sbjct: 173 THKKDPMDFVLWKSVKPNEPSWDSPFGGPNGGKGRPGWHIECSAMSSHHLGEHFDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI +LE
Sbjct: 233 QDLQFPHHENEIAQSEAAHSHNGEPCQMVNYWMHNGFVRVDDEKMSKSLGNFFTIRTVLE 292
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTS 343
+ A V+R +L HYR P++++ Q L +A++ L++
Sbjct: 293 -------KYDAEVVRFFILRAHYRSPLNYSDQHLDDAKLALTRLYTSLRGHVVADVAIDW 345
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCK--- 398
+ A+ +D NT A+ L LA E K+ ++ + + A +LG+
Sbjct: 346 QQPHSARFKEAMDDDFNTPEAMAVLFDLANEVNKTKSLEVAALLKSLAGVLGLLQRDADA 405
Query: 399 --------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + I I++LV +R K K F+ AD IRK+L G +LED
Sbjct: 406 FLQGDVAAQLAGTELKIDIDQLVIQRNEAKKTKNFAEADRIRKELADAGIVLEDT----- 460
Query: 451 GQRMTRWKQ 459
T W++
Sbjct: 461 -ALGTTWRK 468
>gi|289422515|ref|ZP_06424358.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|289157087|gb|EFD05709.1| cysteine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
Length = 467
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 182/489 (37%), Positives = 267/489 (54%), Gaps = 55/489 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT+ RK EF ++ ++MYVCGPTVY+F H+GNARP VFD L R Y E
Sbjct: 1 MKVYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N TD+DDKII+R+ +E S + K +++ D L T P+
Sbjct: 60 -VTYVQNFTDVDDKIIKRSHEEGIS------PEEVAEKYIKEYFIDCDGLGIKRATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T++I ++I IQ+++ G+AYE+N +++F T YG S + I+E ++G R+
Sbjct: 113 VTDNIKEIISFIQDLVDKGYAYESNGDVLFRTREFKEYGKLSHQNIEELELGARIDVDDK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EPGW+SPWG GRPGWHIECS MSS YLG DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKDGEPGWKSPWGEGRPGWHIECSVMSSRYLGNTIDIHAGGQDLQFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C + AN W+HNG++N++G KMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSECRNG-HVFANYWMHNGYINVDGEKMSKSLGNFFTVREIAE-------KYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
++R +L THYR P++F+ L +A+ L + +
Sbjct: 285 GLVRFFLLSTHYRNPVNFSDTILDQAKAGLERLTNARDNAEFMMSKLEDTKMSPEETGLV 344
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +DLNT AI A+ +LA+ N + +FN +
Sbjct: 345 DELNSYKTKFIEAMDDDLNTSDAISAIFELAKFMNTNIKDTSSKEFIGLNIDLFNELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I N +++ +E+++ +R K K F+ AD IR++L G ++ED +
Sbjct: 405 LNIANKSVEENDDLARTVEEMIAKRAEAKKNKDFALADKIREELLEMGIVIEDTR----- 459
Query: 452 QRMTRWKQK 460
+ +WK+K
Sbjct: 460 -QGVKWKRK 467
>gi|113970833|ref|YP_734626.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
gi|123029526|sp|Q0HH98|SYC_SHESM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|113885517|gb|ABI39569.1| cysteinyl-tRNA synthetase [Shewanella sp. MR-4]
Length = 461
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 179/483 (37%), Positives = 253/483 (52%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN++ R+ EF+ I P + MYVCG TVYD HIG+ R + FD++ R LRY
Sbjct: 1 MPMLKIYNSITRQKQEFKPITPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V + RNITDIDDKII+RA + + + +T + + KD L + P
Sbjct: 61 YE--VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMIRPDF 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I +++ ++ GHAY A+ +++F +S P YG S + +++ + G RV
Sbjct: 113 EPRATLHITEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL
Sbjct: 173 VDDNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 QFPHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAV 351
+ +R +L HYR I+++ + L +A L +
Sbjct: 285 HYDPETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAPAPAEEFVAKF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VC 397
+A+ +D NT A L + RE + + A +LG+
Sbjct: 345 KAAMDDDFNTPEAYSVLFDMVREINRLKTTDMAQASAMAVAMKQLADVLGLLHQAPDAFF 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + + IE L+ ER K + +AD R +L G +LED G T W
Sbjct: 405 KGEGSDDEVAEIEALIVERNRARVEKDWPAADVARNRLNELGVVLED------GPSGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RKK 461
>gi|317497616|ref|ZP_07955934.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
gi|316895175|gb|EFV17339.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 5_1_63FAA]
Length = 467
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 194/484 (40%), Positives = 258/484 (53%), Gaps = 53/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ EF + P + MYVCGPTVY++ HIGNARPMI+FD + R Y E
Sbjct: 1 MKIYNTLTRQKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I + ++ +D L THQPR
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVTAT------EIAERYIKECKQDMEALNIKPATHQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +IQ +I GHAYE + + F T S +YG S++ ID+ + G R V
Sbjct: 113 ATEEIGGMIKMIQTLIKKGHAYEVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ KK+P DF+LWK E W+SPWG GRPGWHIECS MS Y+G DIH GG DLI
Sbjct: 173 EEGKKDPLDFVLWKPKKEGEIAWDSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + EK AN W+HNGFLN+ +KMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSEACNG-EKFANYWMHNGFLNINNKKMSKSAGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------------- 340
+P VIR ML HYR P++F+ + A+ L +
Sbjct: 285 YPLQVIRFFMLSAHYRTPLNFSDTLVESAKTGLDRILTAIDLCREMAAKEETGSLSKEET 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
+ ++ A+ +D NT A+ A+ ++ RES +L +
Sbjct: 345 EHFANIEVLVKKFEDAMEDDFNTADAVSAIFEIVRESNSTVKDFSADYAKKILKVLEDLC 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGIE KE + I KL++ER K K F+ AD IR QL +G +L+D +
Sbjct: 405 SVLGIETTKEEEILDEEIE--KLIEERQAARKNKDFARADEIRDQLLEQGIVLKDTREGV 462
Query: 450 NGQR 453
R
Sbjct: 463 KWSR 466
>gi|261493400|ref|ZP_05989926.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
gi|261496665|ref|ZP_05993045.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261307868|gb|EEY09191.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
OVINE]
gi|261311044|gb|EEY12221.1| cysteine--tRNA ligase [Mannheimia haemolytica serotype A2 str.
BOVINE]
Length = 469
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 188/480 (39%), Positives = 265/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 11 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGY- 69
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 70 -NLRYVRNITDVDDKIIKRALEN------NETCDELVDRMIAEMHKDFDALNILRPDVEP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 123 RATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIK 182
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 183 SIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 242
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF +I +L +
Sbjct: 243 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------Y 294
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
A +R L HYR +D+++ L A L + + A +
Sbjct: 295 DAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGGEHYVEAFKT 354
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A+ L ++ARE K + L A +LG+ K
Sbjct: 355 AMDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKG 414
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 415 DANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN------GTIWRK 468
>gi|312794405|ref|YP_004027328.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312181545|gb|ADQ41715.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 465
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 254/479 (53%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL + EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + +++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGITVF------ELAKRFIEEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++++ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVSINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + + + ILGI
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFVKDTLKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV++R K K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKAKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|167855009|ref|ZP_02477783.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
gi|167853857|gb|EDS25097.1| cysteinyl-tRNA synthetase [Haemophilus parasuis 29755]
Length = 459
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 178/480 (37%), Positives = 255/480 (53%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I P ++ MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPIYPDHVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+R+ + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRSLEN------NETCDQLVDRMIIEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ ++ GHAY + +++F+ S YG+ SR+ +++ + G RV K
Sbjct: 113 RATQHIPEIIAIVEKLLAKGHAYVAEDGDVMFNVESFQKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W+SPWG+GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 SVKRNPMDFVLWKMSKENEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L + KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHG-DDYVNYWLHTGMLTINEEKMSKSLNNFFTIRDIL-------NKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQR----LTEAEILLSKWPQTSTSKGIIDPAVL-----S 353
+R L YR +D++ + E L + + + +
Sbjct: 285 DCESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNVELAENDQYVTAFKE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
++ +D NT A+ L +LARE K + L A +LG+
Sbjct: 345 SMDDDFNTPGALAVLFELAREINKLKAENQVEANKLAARLKQLAGVLGLLEQDPETFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + IE L+++R K ++ AD R +L + G +LED N T W++
Sbjct: 405 DANNDEVAEIEALIKQRNEARASKNWAVADEARNKLTAMGIVLEDGAN------GTTWRK 458
>gi|294788619|ref|ZP_06753861.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
gi|294483496|gb|EFG31181.1| cysteine--tRNA ligase [Simonsiella muelleri ATCC 29453]
Length = 475
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 177/490 (36%), Positives = 258/490 (52%), Gaps = 54/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F+ IDP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +
Sbjct: 1 MLYLYNTLTRQKERFEPIDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII RA Q + I +T + Q +D+ L L P +P
Sbjct: 60 -PLTYVRNITDIDDKIIARANQNG------ETIQQLTERFIQAMNEDSQALGVLRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT HI QMI +I+ +I +G AY N ++ + YG S + +D+ + G RV
Sbjct: 113 KATEHIAQMIQMIEKLIENGKAYPAENGDVYYAVREFDAYGQLSGKSLDDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECSAM G+ FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKPEEPSWASPWGNGRPGWHIECSAMGGELFGQTFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADR---------------IEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
PHHENEIAQSC A+ I+ W+HNGF+ ++ KMSKS GNF T
Sbjct: 233 PHHENEIAQSCGANGGLCGHNKPVSGSLKKIDSHVKYWLHNGFIRVDNEKMSKSLGNFFT 292
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
I ++L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 293 IRDVL-------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLTRLYNTLNNVKPI 345
Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLPIFNASAHIL 392
+ + +A+ +D T A+ L ++A E+ KN +L +L
Sbjct: 346 EFKLDSNGNNNDYTHKFFNAMNDDFGTAEAVSVLFEIANEANKNDSAELSGCLKTLGGVL 405
Query: 393 GIEVCKEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
G+ ++ + I KL+ +R I + K ++ +D IR L ++D
Sbjct: 406 GLLQDNPEQFLQGGNNVDGLSADEINKLISQRKIARETKNWAESDRIRDILAEHKIQVKD 465
Query: 445 YKNPDNGQRM 454
+ R
Sbjct: 466 SADGTTWTRG 475
>gi|24373357|ref|NP_717400.1| cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
gi|30316159|sp|Q8EG22|SYC_SHEON RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|24347617|gb|AAN54844.1|AE015623_6 cysteinyl-tRNA synthetase [Shewanella oneidensis MR-1]
Length = 459
Score = 400 bits (1029), Expect = e-109, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 254/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I+P + MYVCG TVYD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPINPGKVGMYVCGVTVYDLCHIGHGRTFVSFDMIVRYLRYAGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITDIDDKII+RA + + + +T + + KD L P +P
Sbjct: 61 --VNFQRNITDIDDKIIKRANENQ------EDCNTLTDRLIGEMHKDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY A+ +++F +S P YG S + +++ + G RV
Sbjct: 113 RATLHIAEIIDMVERLLARGHAYVAADGDVLFSVASFPEYGRLSGQNLEQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DNKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMIDREKMSKSLGNFFTIRDVLS-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR I+++ + L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQINYSEENLKQARAALERLYTAIKDVDLTVAAAPAEEFVAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + RE + L A +LG+ K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVREINRLKLTDMAEASALAVSMKQLADVLGLLHQSPDAFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R +L G +LED G T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARTEKDWPAADVARNRLNELGVVLED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|118578479|ref|YP_899729.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|171704442|sp|A1AK01|SYC_PELPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118501189|gb|ABK97671.1| cysteinyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 493
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 187/512 (36%), Positives = 251/512 (49%), Gaps = 79/512 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL + F + P MYVCG TVYD+ HIG+AR +VFDV+YR L Y
Sbjct: 1 MALRIYNTLTGEKDTFVPLHPGKAGMYVCGVTVYDYCHIGHARANVVFDVIYRYLGYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRN TDIDDKII RA QE + I+ + + F +D RL PT +
Sbjct: 61 --AVTYVRNFTDIDDKIINRANQEGVD------YTTISERYIEAFNQDMARLGLAKPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+H+ +I +I+ +I GHAYE++ ++ + S P+Y S R +++ G RV
Sbjct: 113 PKATDHMGGIISVIETLIAKGHAYESDGDVYYAVESFPSYLRLSGRNLEDMLAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK S P EP W+SPWG GRPGWHIECSAMS YLGK FDIHGGG DL+F
Sbjct: 173 DRKRNPMDFALWKGSKPGEPSWDSPWGAGRPGWHIECSAMSMEYLGKTFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + W+HNGF+N+ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAANGCQ-FVRYWMHNGFVNINSEKMSKSLGNFFTIREVLE-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
+R +L HYR PIDF+ Q L +A+ L +
Sbjct: 285 DPETLRFFILSAHYRSPIDFSDQNLNDAQAGLERIYSCLAAVDGAMEGQDVPNQPVEGAP 344
Query: 341 --------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------------- 377
+ A+ +D NT A+ L + R + +
Sbjct: 345 LPPAGAELHEKLQSLISRFREAMDDDFNTAQALGVLFEAVRATNRFMAESGDQTPATLAL 404
Query: 378 NHDLLPIFNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKF 425
+ +F + +LG+ + + IE+L+ ER + F
Sbjct: 405 LGQVRRLFAETGDVLGLFTSQPAAWLESIKQAKSDQMEISPQEIEQLIAERAAARTNRDF 464
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
D IR L KG L D + T W
Sbjct: 465 KRGDEIRDLLLQKGIQLLDS------PQGTTW 490
>gi|307635173|gb|ADI86121.2| cysteinyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 481
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 190/503 (37%), Positives = 262/503 (52%), Gaps = 67/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL +F ++P ++MYVCG TVYD HIG+AR +VFD++YR LR+
Sbjct: 1 MALRVYNTLSGTKEDFVTLEPGRVKMYVCGVTVYDHCHIGHARANVVFDMIYRYLRHAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA +E ++I+ + +F +D L PT+Q
Sbjct: 61 E--VTYVRNYTDVDDKIINRANKEGV------PFNVISERFIAEFDRDMAALGLDLPTYQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +MI +I+ ++ G AY A+ ++ F + Y S+R ++E + G R+
Sbjct: 113 PKATEHIAEMIQVIERLVAKGFAYAADGDVYFSVEAFDQYLKLSKRNLEEMQAGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRHPMDFALWKGSKPGEPYWDSPWGQGRPGWHIECSAMSMKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + A WIHNGF+N+ KMSKS GNF TI E+LE+ +
Sbjct: 233 PHHENEIAQSEAANG-KPFARYWIHNGFVNINAEKMSKSLGNFFTIKEVLES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A V+R +L HYR PIDF+ Q L EA L +
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAAAGLERIYNALAGIDEAVAADGTGAGRIDEEL 344
Query: 347 ------IDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASA 389
+ A+ +D NT A+ + L R + +
Sbjct: 345 AEKAAGLPTRFREAMDDDFNTAQALGYVFDLVRAVNRVLAEGEIDRAVLASAREAIDRVG 404
Query: 390 HILGI---------EVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ E K + IE+L++ER K + F AD IR L +
Sbjct: 405 AVLGLFTSEPGAFVERLKSRKAAALPIEAAEIERLIEERNAARKAQDFRRADEIRDTLAA 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G +L D + T WK K
Sbjct: 465 QGILLLDS------AQGTTWKVK 481
>gi|297579367|ref|ZP_06941295.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
gi|297536961|gb|EFH75794.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC385]
Length = 459
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|225024891|ref|ZP_03714083.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
gi|224942349|gb|EEG23558.1| hypothetical protein EIKCOROL_01779 [Eikenella corrodens ATCC
23834]
Length = 473
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 182/485 (37%), Positives = 254/485 (52%), Gaps = 52/485 (10%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 4 IYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+AT
Sbjct: 62 TYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDVEPKAT 115
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV K
Sbjct: 116 ENIPQMIAMIEALIRNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++P DF+LWK + EP WESPWG GRPGWHIECSAMS G FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSDKLFGDTFDIHGGGADLQFPHH 235
Query: 246 ENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
ENEIAQS A W+HNGF+ ++G KMSKS GNF TI +
Sbjct: 236 ENEIAQSVGASGHVCGHEHAHTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRD 295
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------- 343
+L + + ++R +L HYR P++++ L +A+ L++ T +
Sbjct: 296 VL-------KQYDPEIVRFFILRAHYRSPLNYSDAHLDDAKNALTRLYNTLANVPPVEFQ 348
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVC 397
+A+ +D +TV A+ L +LA E+ K + +L A A +G+
Sbjct: 349 VASEANDYTRRFFAAMNDDFDTVQAVAVLFELAGEANKTQSAELSGCLKALAGTIGLLQR 408
Query: 398 KE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
N + IE L+ R K ++ +D IR L +G L D +
Sbjct: 409 NPTEFLQGGATANGLSNEEIEALIARRKQARADKNWAESDRIRDLLAEQGITLRDGADGT 468
Query: 450 NGQRM 454
+ R
Sbjct: 469 SWTRG 473
>gi|327484400|gb|AEA78807.1| Cysteinyl-tRNA synthetase [Vibrio cholerae LMA3894-4]
Length = 459
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 60 -NLTFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGTHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|15641850|ref|NP_231482.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121591342|ref|ZP_01678630.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121730275|ref|ZP_01682651.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|147673703|ref|YP_001217382.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227081977|ref|YP_002810528.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|229508055|ref|ZP_04397560.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229511706|ref|ZP_04401185.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229518845|ref|ZP_04408288.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229607616|ref|YP_002878264.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254848934|ref|ZP_05238284.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255745392|ref|ZP_05419341.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|298498113|ref|ZP_07007920.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
gi|11387140|sp|Q9KQZ9|SYC_VIBCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187631647|sp|A5F763|SYC_VIBC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781697|sp|C3LNF1|SYC_VIBCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|9656376|gb|AAF94996.1| cysteinyl-tRNA synthetase [Vibrio cholerae O1 biovar El Tor str.
N16961]
gi|121546806|gb|EAX56972.1| cysteinyl-tRNA synthetase [Vibrio cholerae 2740-80]
gi|121627977|gb|EAX60538.1| cysteinyl-tRNA synthetase [Vibrio cholerae V52]
gi|146315586|gb|ABQ20125.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|227009865|gb|ACP06077.1| cysteinyl-tRNA synthetase [Vibrio cholerae M66-2]
gi|227013746|gb|ACP09956.1| cysteinyl-tRNA synthetase [Vibrio cholerae O395]
gi|229343534|gb|EEO08509.1| cysteinyl-tRNA synthetase [Vibrio cholerae RC9]
gi|229351671|gb|EEO16612.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|229355560|gb|EEO20481.1| cysteinyl-tRNA synthetase [Vibrio cholerae BX 330286]
gi|229370271|gb|ACQ60694.1| cysteinyl-tRNA synthetase [Vibrio cholerae MJ-1236]
gi|254844639|gb|EET23053.1| cysteinyl-tRNA synthetase [Vibrio cholerae MO10]
gi|255737222|gb|EET92618.1| cysteinyl-tRNA synthetase [Vibrio cholera CIRS 101]
gi|297542446|gb|EFH78496.1| cysteinyl-tRNA synthetase [Vibrio cholerae MAK 757]
Length = 459
Score = 400 bits (1028), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|114563765|ref|YP_751278.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
gi|122299286|sp|Q07ZX5|SYC_SHEFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|114335058|gb|ABI72440.1| cysteinyl-tRNA synthetase [Shewanella frigidimarina NCIMB 400]
Length = 460
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 181/481 (37%), Positives = 252/481 (52%), Gaps = 45/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R EF+ I+P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSISRDKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYIGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRAAEN------NESCESLTERLIAEMHQDFDALNMKRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I ++Q ++ HAY +N +++F +S P YG S + +D+ + G RV
Sbjct: 113 RATLHIEEIIDMVQRLLDRDHAYVASNGDVLFSVASFPEYGQLSGQNLDQLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 NAKRNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS NF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLDNFFTIRDVL-------KHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + S
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARAALERLYTALKGLDLTVDAAPAEAFVAKFKS 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIE------VCKE 399
A+ +D NT A L ++ RE K D+ A +LG+ K
Sbjct: 345 AMDDDFNTPEAYSVLFEMVREINRLKTTDMAEASALGVSLKQLADVLGLISQTPEAFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R +L G LED G T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARTEKDWPAADVARDRLNELGVELED-----GGPSGTTWRK 459
Query: 460 K 460
K
Sbjct: 460 K 460
>gi|254360582|ref|ZP_04976731.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
gi|153091122|gb|EDN73127.1| cysteine--tRNA ligase [Mannheimia haemolytica PHL213]
Length = 458
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 188/479 (39%), Positives = 265/479 (55%), Gaps = 45/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPNQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDELVDRMIAEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I +GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIIAMVEKLIHNGHAYVAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP WESPWG GRPGWHIECSAM+S LG+ FDIHGGG DL+F
Sbjct: 173 SIKKNPMDFVLWKMSKAGEPSWESPWGNGRPGWHIECSAMNSKELGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G L ++ KMSKS GNF +I +L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNYWLHTGMLTIDKEKMSKSLGNFFSIRHMLGL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------IDPAVLSA 354
A +R L HYR +D+++ L A L + + A +A
Sbjct: 285 DAESLRYFFLTAHYRSLLDYSIDNLDLARSALERLYTALRGCDVSGEAIGEHYVEAFKTA 344
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKEH 400
+ +D NT A+ L ++ARE K + L A +LG+ K
Sbjct: 345 MDDDFNTPGALAVLFEIARELNKLKTEDMAKANGLAVRLKELAGVLGLLEQDPDAFLKGD 404
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N + + IE L+++R K ++ AD +R +L++ +LED N T W++
Sbjct: 405 ANDDETAEIEALIKQRNEAKAAKNWAVADEVRDKLKAINIVLEDTPN------GTIWRK 457
>gi|82703002|ref|YP_412568.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|109894912|sp|Q2Y7U5|SYC_NITMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|82411067|gb|ABB75176.1| cysteinyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 464
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 255/479 (53%), Gaps = 45/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+N+L R+ EF + P +++YVCG TVYD+ H+G+AR M+VFD++ R R +
Sbjct: 1 MLKIHNSLAREKQEFIPLTPGKVKVYVCGMTVYDYCHLGHARVMVVFDMVQRWFRANRFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA++ ++I +T++ Q +D L P+ +P
Sbjct: 61 --VTYVRNITDIDDKIIRRAQENK------ESIEALTARFIQAMEEDAAALGVEPPSWEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+ MI +IQ ++ AY +N ++ + P YG S + +DE + G RV
Sbjct: 113 RATRHVEDMIAMIQVLVDKKLAYPASNGDVYYAVHRFPGYGKLSGKSLDELRAGERVIVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK +P DF+LWK + P EP W+SPWG GRPGWHIECSAM HYLG+ FDIHGGG DL F
Sbjct: 173 PHKNDPLDFVLWKAAKPGEPQWDSPWGPGRPGWHIECSAMGEHYLGEHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ + KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEGAHG-HPFVNYWMHNGFVRVNDEKMSKSLGNFFTVREILA-------HF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN----- 357
V+R +L HYR P+++ +L +A L + + D +
Sbjct: 285 QPEVVRFFILRAHYRSPLNYADMQLEDAGRALDRLYTALKGIEVHDEVEIDWDDPYASRF 344
Query: 358 ------DLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK-----EHLNKN 404
D NT A+ L LA E K + + A +LG+ + +
Sbjct: 345 REAMNDDFNTPEALAVLFDLATEVNKTRLPRDIALMKALGGVLGLLQQDPWKYFQQADSE 404
Query: 405 I----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E+L+Q+RL+ K + AD IRK+L ILED G T W++
Sbjct: 405 DPAFAPEKVEQLIQQRLVARANKDYREADRIRKELMEANIILED------GPHGTTWRR 457
>gi|262404192|ref|ZP_06080747.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
gi|262349224|gb|EEY98362.1| cysteinyl-tRNA synthetase [Vibrio sp. RC586]
Length = 459
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 252/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENS------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLDQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRTVPAAGGEEYLTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMCELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 GAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|258544752|ref|ZP_05704986.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520023|gb|EEV88882.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 473
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 172/463 (37%), Positives = 239/463 (51%), Gaps = 32/463 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ YN+L R+ F +P I MYVCG TVYD+ HIG+AR M+VFD + R LR
Sbjct: 24 LQFYNSLTRQKEAFIPREPGKIGMYVCGMTVYDYCHIGHARVMVVFDTIARHLRASGY-- 81
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ YVRNITDIDDKII RA + + I +T++ +D L C P +PR
Sbjct: 82 ALKYVRNITDIDDKIIARAHENG------EPIDALTARFITAMHEDEAALGCQRPDVEPR 135
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + MI L+Q +I GHAY N ++ + S P YG + R +D+ + G R+
Sbjct: 136 ATAAVSGMIELVQTLIAKGHAYAADNGDVYYAVRSFPAYGKLANRSLDDLRAGERIAVNE 195
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + P EP W+SPWG+GRPGWHIECS M + LG+ FDIHGGG+DL FP
Sbjct: 196 AKKDPLDFVLWKAAKPGEPAWDSPWGKGRPGWHIECSVMGAETLGEHFDIHGGGMDLKFP 255
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EIAQS A N WIHNGF+ ++ KMSKS GNF T+ ++L + +
Sbjct: 256 HHECEIAQSEGACG-HPHVNYWIHNGFVQIDNEKMSKSLGNFFTVRDVL-------KKYD 307
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDPAVLSALY 356
+R +L +HYR P++++ L EA+ L++ A A+
Sbjct: 308 GETLRAFILSSHYRGPLNYSDAALDEAKKALTRLYSALDKAPADGAMDADAVAAFDEAMN 367
Query: 357 NDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIEVCK-------EHLNKNISIA 408
+D NT A L LAR L + LG+ E+
Sbjct: 368 DDFNTPKAFAVLFDLARRLNSGETALAATLKTLSGRLGLLQQNPADWLKGENSGSLSEAD 427
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
I + R K ++ AD IR +L ++G I++D
Sbjct: 428 ILARIHARAEAKAAKDYARADAIRAELAAQGIIIKDTAGGVEW 470
>gi|229515228|ref|ZP_04404688.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
gi|229347933|gb|EEO12892.1| cysteinyl-tRNA synthetase [Vibrio cholerae TMA 21]
Length = 459
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 177/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYIADNGDVMFEVSRYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDIAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|95929121|ref|ZP_01311866.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95135022|gb|EAT16676.1| cysteinyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 481
Score = 400 bits (1027), Expect = e-109, Method: Composition-based stats.
Identities = 188/501 (37%), Positives = 260/501 (51%), Gaps = 67/501 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL F+ P + MYVCG TVYD+ HIG+AR IVFD++YR L+Y
Sbjct: 1 MSLRVYNTLSGNKELFEPRVPGKVGMYVCGVTVYDYCHIGHARANIVFDIVYRYLKYSDY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TD+DDKII RA + + ++ + Q F +D RL PT Q
Sbjct: 61 D--VTYVRNYTDVDDKIINRANERGITS------QQLSEEFIQAFDEDMARLGLDLPTVQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +I L++ +I +G AY ++ ++ F S +Y S+R +DE + G R+
Sbjct: 113 PKATEHIDHIIALVERLIANGKAYASDGDVYFAVESFDSYLKLSKRNLDEMQAGARIAPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK + P EP WESPWG+GRPGWHIECSAM YLG+ FDIHGGG DL+F
Sbjct: 173 EKKRNPMDFALWKAAKPGEPSWESPWGKGRPGWHIECSAMGMEYLGESFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI ++L +++
Sbjct: 233 PHHENEIAQSEAATG-QPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDIL-------KTY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
V+R +L HYR PIDF+ Q L EA + LS++ + + +
Sbjct: 285 DPEVVRFFILSAHYRSPIDFSDQNLKEARLGLSRFYEGLQAAAEVLAECPPSDVEATDGA 344
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
A+ +D NT AI L + R + L F
Sbjct: 345 ELTAKFREAMDDDFNTAQAIGYLFEGIRTMNRLMATKKFRKKADLVASVRSLYDTFLELG 404
Query: 390 HILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG + + ++ I+ L+ ERL + K F+ +D IR +L
Sbjct: 405 KVLGMFGSEPKAWLNQQRLSALADLDITVEEIDALIAERLQARQDKDFARSDAIRDELAE 464
Query: 438 KGFILEDYKNPDNGQRMTRWK 458
KG +L D G T WK
Sbjct: 465 KGILLLD------GAGGTDWK 479
>gi|329117979|ref|ZP_08246692.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
gi|327465867|gb|EGF12139.1| cysteine--tRNA ligase [Neisseria bacilliformis ATCC BAA-1200]
Length = 494
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 183/495 (36%), Positives = 258/495 (52%), Gaps = 58/495 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + +YNTL R+ F IDP+N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 20 KPMLNLYNTLTRQKEAFSPIDPANVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECG 79
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+TYVRNITDIDDKII RA + + I +T++ +D L L P
Sbjct: 80 Y--PLTYVRNITDIDDKIIARAAENG------ETIGELTARFIAAMHEDADALGVLRPDL 131
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT +IPQMI +I+++I G AY AN ++ + P YG S + +D+ + G RV
Sbjct: 132 EPKATENIPQMIAMIESLIQKGKAYPAANGDVYYAVREFPAYGQLSGKSLDDLRAGERVE 191
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + EP WESPWG+GRPGWHIECSAMS + G FDIHGGG DL
Sbjct: 192 VDGFKRDPLDFVLWKAAKAGEPAWESPWGQGRPGWHIECSAMSENLFGDTFDIHGGGADL 251
Query: 241 IFPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNF 285
FPHHENEIAQS A W+HNGF+ ++G KMSKS GNF
Sbjct: 252 QFPHHENEIAQSVGASGHTCGHDHTLTHHGKPVASHVKYWLHNGFIRVDGEKMSKSLGNF 311
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-- 343
TI ++L + + V+R +L HYR P++++ L +A+ L++ +
Sbjct: 312 FTIRDVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALARLYTALKNTP 364
Query: 344 ---------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHIL 392
+A+ +D TV A+ L +LA E K D A I+
Sbjct: 365 PAGFALSETANNYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTRDAALSGCLKALGGII 424
Query: 393 GIEVCKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
G+ + + IE L+ R K ++ +D IR L ++ ILED
Sbjct: 425 GLLQRDPTEFLQGGTASDGLSNEEIENLIAMRKQARADKNWAESDRIRDLLTAQNIILED 484
Query: 445 YKNPDNGQRMTRWKQ 459
+T W++
Sbjct: 485 S------AGITTWRR 493
>gi|322421697|ref|YP_004200920.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
gi|320128084|gb|ADW15644.1| cysteinyl-tRNA synthetase [Geobacter sp. M18]
Length = 480
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 188/502 (37%), Positives = 259/502 (51%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL EF I+P + MYVCG TVYD HIG+AR +VFD++YR L+
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRYLQAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TDIDDKII RA ++ + I+ + ++F D RL PT Q
Sbjct: 61 E--VTYVRNYTDIDDKIINRANRDGV------PYNEISERFIKEFDSDMARLMLRIPTFQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT H+P++I L+Q +I G AY++ +++ + Y S+R +++ + G R+
Sbjct: 113 PKATEHVPEIIALVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+ DIHGGG DLIF
Sbjct: 173 DKKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINAEKMSKSLGNFFTIKEVLER-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A V+R +L HYR PIDF+ Q L EAE+ L + + +
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALSGIDERLTAGPDHGATEESAE 344
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
I + A+ +D NT A+ + L R + + A
Sbjct: 345 LEEKCSAIATRFIEAMDDDFNTAMALGHIFDLVRSINRALPVSPLELLKRVKEEVARIAA 404
Query: 391 ILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
LG ++ K+ + IE L+ ER + K F +D IR L K
Sbjct: 405 TLGVCDSVPAAFLQRMKDRKTSEMEIPVEEIEALIAERAEARRSKNFKRSDEIRDLLLEK 464
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
+L D + T WK K
Sbjct: 465 DIVLLDT------PQGTTWKVK 480
>gi|160881448|ref|YP_001560416.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
gi|187629805|sp|A9KSM5|SYC_CLOPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160430114|gb|ABX43677.1| cysteinyl-tRNA synthetase [Clostridium phytofermentans ISDg]
Length = 470
Score = 399 bits (1026), Expect = e-109, Method: Composition-based stats.
Identities = 179/487 (36%), Positives = 250/487 (51%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL + EF + + MYVCGPTVY++ HIGNARP++VFD + R L Y +
Sbjct: 1 MKIYNTLTKAKEEFIPLQEGKVSMYVCGPTVYNYIHIGNARPVVVFDTVRRYLEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E S I+ + ++++KDT L L T +P+
Sbjct: 60 -VNFVSNFTDVDDKIIKKANEEGVSA------HEISERYIKEYLKDTEALNVLPVTTRPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI +I+ +I GHAYE N + F T S YG S++ ID+ + G R+
Sbjct: 113 ATEEIDGMIDMIEELIEKGHAYEKNGTVYFKTRSFKQYGKLSKKNIDDLEAGARIAVADE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K +P DF+LWK EP W +PW GRPGWHIECS MS YLG DIH GG DLIFPH
Sbjct: 173 KDDPMDFVLWKPKKVGEPAWSAPWCDGRPGWHIECSVMSKKYLGDQIDIHAGGEDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ C E A W+HNGFLN++ +KMSKS GNF T+ E+ +
Sbjct: 233 HENEIAQTECCTGKE-FAKYWMHNGFLNVDNKKMSKSEGNFFTVREIFA-------EYAP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
V+R +L +YR PI+F+ + ++ L +
Sbjct: 285 AVLRFFLLSVNYRSPINFSRDIIESSKNGLERIQTAVEQLHFLAKVKAEKGELSTELTES 344
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFN 386
+ A+ +D NT AI ++ ++ + S +L
Sbjct: 345 ESTLLKEFDALIKKFEDAMDDDFNTADAISSIFEMVKLSNTYVTVESSVEMIQKVLSNIT 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
ILG+E E + + IE+L+ +R K K F+ +D IR L KG ILED +
Sbjct: 405 TFCDILGLET--EKKAEILDEEIEQLIADRQSARKAKDFAKSDEIRNLLLEKGIILEDTR 462
Query: 447 NPDNGQR 453
+R
Sbjct: 463 EGVKWKR 469
>gi|110803392|ref|YP_699686.1| cysteinyl-tRNA synthetase [Clostridium perfringens SM101]
gi|122956489|sp|Q0SQC1|SYC_CLOPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110683893|gb|ABG87263.1| cysteine--tRNA ligase [Clostridium perfringens SM101]
Length = 466
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 170/489 (34%), Positives = 245/489 (50%), Gaps = 57/489 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL +K EF + P ++MYVCGPTVY+F HIGN R IVFD + R Y
Sbjct: 1 MIKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDK+I++A +E ++ I +++ +D L T P
Sbjct: 60 -KVDFVQNFTDIDDKMIKKANEEGITV------KKIGDTYIKEYYQDADALNIERATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 RATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF +WK P EP W SPWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 RKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E A W+H+ F+N+ KMSKS NF T E+LE +
Sbjct: 233 HHENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A VIR ML HYR+ ++F+ L A+ + + + +
Sbjct: 285 ADVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAY 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ + +D NT AI A+ L +++ N L +
Sbjct: 345 LESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LG+ ++ N+ IE L+ +R K + F+ AD IR +L+ +G +LED
Sbjct: 405 PLGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDT----- 457
Query: 451 GQRMTRWKQ 459
+ RWK+
Sbjct: 458 -PQGVRWKR 465
>gi|120554762|ref|YP_959113.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
gi|187629847|sp|A1U1Q7|SYC_MARAV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120324611|gb|ABM18926.1| cysteinyl-tRNA synthetase [Marinobacter aquaeolei VT8]
Length = 463
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 182/482 (37%), Positives = 260/482 (53%), Gaps = 49/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL ++ F+ ++P +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR+ +
Sbjct: 1 MRIYNTLTQQKEAFKTLEPGKVRMYVCGMTVYDYCHLGHARVLVAFDVVTRYLRHRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITDIDDKI+ RA + + + +T + + +D +L L+P +PR
Sbjct: 60 -VHYVRNITDIDDKILRRADENG------EVYTDLTDRMIRAMHEDEAKLGVLSPNEEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I +I +IQ +I GHAY N ++ F S P+YG S++K+++ G RV +
Sbjct: 113 ATAFIDDIIAMIQKLIAGGHAYAADNGDVYFAVESFPDYGKLSKKKLEDLVAGARVDVQE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++PADF LWK + P E W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 173 AKRSPADFALWKAAKPGEVSWQSPWGEGRPGWHIECSAMSTKCLGDTFDIHGGGPDLLFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS CA + W+H G + + KMSKS GNF TI E+LE +P
Sbjct: 233 HHENEIAQSECATG-HTFVHTWMHAGAIRVNKEKMSKSLGNFFTIREILE-------KYP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPAVLS 353
A V+R ++ +HYR +D++ L EA L+K ++ D
Sbjct: 285 AEVVRYFLVSSHYRSQVDYSEDNLAEAGRTLTKLYHALRGIVPAKEADVAETDHDRRFAE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL--- 401
+ +D NT AI LH +A + + +LG+
Sbjct: 345 VMDDDFNTAGAIAVLHAVANDINHYRREGDEEAAKRSAAVLVRLGAVLGLLQQNPEAFFQ 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ + IE ++Q R K K F+ AD IR L KG IL+D + T W
Sbjct: 405 ADTGSELTAEDIEAMIQARADARKAKDFAEADRIRDDLLEKGIILDDSR------EGTTW 458
Query: 458 KQ 459
++
Sbjct: 459 RR 460
>gi|152996132|ref|YP_001340967.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
gi|189082069|sp|A6VX53|SYC_MARMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150837056|gb|ABR71032.1| cysteinyl-tRNA synthetase [Marinomonas sp. MWYL1]
Length = 460
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 175/475 (36%), Positives = 252/475 (53%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL K F+ I+ + MYVCG TVYDF HIG+AR MI FDV+ R +R+ E
Sbjct: 1 MLKIYNTLSGKKEIFKPIEEGKVGMYVCGNTVYDFCHIGHARAMISFDVISRFIRHLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITD+DDKII+RA + N++ +T + +D RL P +P
Sbjct: 61 L--NYVRNITDVDDKIIKRAEEN------NESTQSLTERMIAAQREDELRLGNKMPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT + ++I ++Q +I G AY+ + ++ + + +YG + RK+++ G R+ +
Sbjct: 113 KATEFMQEIIDMVQVLIDKGFAYQGTSGDVYYRATKFKDYGKLNNRKLEDMLAGARIDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF+LWK++ E W SPWG GRPGWHIECSAMS++ LG FDIHGGG DL F
Sbjct: 173 VAKEHPADFVLWKQAKAGEVSWSSPWGEGRPGWHIECSAMSTNCLGSHFDIHGGGPDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A E N W+H G + + KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEIAQSEAATGKE-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLA-------KF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLSA 354
V+R M+ + YR ID++ Q L EA++ L + + + + A
Sbjct: 285 NPEVVRYLMVSSQYRSAIDYSDQSLLEAKVALERLYTALRQQQVAESFEPTVFTERFEEA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------ 400
+ +D NT A+ L +L RE K L + A +LG+
Sbjct: 345 MKDDFNTAVAVSVLFELVRELNKAKTEDANKASLLAAELRSLAELLGLLYQDPEYFLQNS 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+AI+ L+ ER K K F+ +D IR +L S+G L D + R
Sbjct: 405 TVSEGLGEVAIQALIDERTQARKDKNFARSDEIRDELASQGIELLDSREGTTWTR 459
>gi|291550109|emb|CBL26371.1| cysteinyl-tRNA synthetase [Ruminococcus torques L2-14]
Length = 468
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 181/485 (37%), Positives = 251/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ ++ EF ++ ++MYVCGPTVY++ HIGNARPMIVFD + R Y +
Sbjct: 1 MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKNYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVTAE------EISQRYIAECKKDMDGMNIEPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I+ +I G+AYE N + + T +YG S + +D+ + G R V
Sbjct: 113 ATEEIDGMISMIETLIEKGYAYEKNGTVYYRTRKFKDYGKLSHKNLDDLQSGGRTLLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++ DF+LWK EP W SPWG GRPGWHIECS MS YLG+ DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWVSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E + W+HNGFLN++ RKMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANGKE-FSRYWMHNGFLNIDNRKMSKSLGNFFTVREI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
+ V+R ML HYR P++F+ + + A+ L + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKSGLERIITAADRLKFLMGSAKTEDMAETEA 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
SA+ +D NT AI A+ L + D L
Sbjct: 345 EKFAKSAEYVGNFESAMDDDFNTADAIAAVFDLVKFINTMTDEDSSKEYLENLFDRLVRL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI V KE ++ + IE L+ ER K K F+ AD IR +L +KG +L+D +
Sbjct: 405 TEVLGIIVDKE--DEILDSDIEALIAERQAARKEKNFARADEIRDELLAKGIVLKDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VQWKR 467
>gi|212636030|ref|YP_002312555.1| cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
gi|226735064|sp|B8CRG0|SYC_SHEPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|212557514|gb|ACJ29968.1| Cysteinyl-tRNA synthetase [Shewanella piezotolerans WP3]
Length = 459
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 254/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL R+ +F I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKLYNTLTRQKEQFVPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCDSLTERLIGEMHRDFDSLNMARPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+P++I +++ +I HAY AN +++F SS P YG S + +++ + G RV +
Sbjct: 113 RATLHMPEIIEMVEKLIAREHAYVAANGDVLFSVSSFPEYGRLSGQNLEQLQAGARVEVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DAKRDPMDFVLWKMSKPGEPTWDSPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTK-YVNYWMHTGMVMVDKEKMSKSLNNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ + L +A+ L +
Sbjct: 285 DAATVRYFLLSGHYRSQLNYSEENLKQAKSGLERIYTALKDLDLTVDAAPAEAFIAQFKR 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L ++ RE + L A +LGI K
Sbjct: 345 AMDDDFNTPEAYSVLFEMVREINRLKLTDMQQASALGVALKQLADVLGILGQDVDTFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R L + G ILED G T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARTEKDWPAADVARDGLNALGVILED------GPEGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|329897619|ref|ZP_08272161.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
gi|328921107|gb|EGG28515.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC3088]
Length = 457
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 201/478 (42%), Positives = 271/478 (56%), Gaps = 43/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL RK F+ P + MYVCGPTVY+ AHIGNARP++VFDVL+RLL+ Y
Sbjct: 1 MDITLYNTLARKKERFEPRVPGEVTMYVCGPTVYNLAHIGNARPVVVFDVLFRLLQTQY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y RNITDIDDKII AR+ + I +TS+ TQ+F +D L L PT +
Sbjct: 60 -QTVRYARNITDIDDKIITAARERA------EPIDAVTSEFTQKFREDVAALGTLPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT+++ MI +++ ++ HAYEA+ ++F +S+PNYG S R +D+ G RV
Sbjct: 113 PHATHNLGPMIAMVEALLAKNHAYEADGHVLFSVTSMPNYGELSGRNLDDMLAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + EPGWESPWGRGRPGWH+ECSAM +LG DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPAADDEPGWESPWGRGRPGWHLECSAMIHEHLGLEIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA W+HN +++++G KMSKS GNF TI ELL +
Sbjct: 233 PHHENEIAQSCCAYG-GSYVRYWMHNAYIDIDGEKMSKSLGNFKTIRELLGL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLS 353
V+R A+L HYR ++F+ + L ++E L+ +D + +
Sbjct: 285 RGEVLRFALLSAHYRSSLNFSKELLDQSENALNGLYNALRKVESVDAVGPESVEQESWYA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHL------- 401
AL +D+NT AI LH+L E K D + A A +LGI
Sbjct: 345 ALCDDVNTPLAISELHQLISELNKADDSDKASIKGRILACASLLGILQSAPSDWLRGDDS 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ AI+ LV ER+ K ++ AD IR L G +LED T W++
Sbjct: 405 EGLSAEAIDALVAERVEAKAAKNYARADEIRTVLTEAGVVLEDS------PSGTTWRR 456
>gi|119471530|ref|ZP_01613944.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
gi|119445473|gb|EAW26759.1| cysteinyl-tRNA synthetase [Alteromonadales bacterium TW-7]
Length = 459
Score = 399 bits (1025), Expect = e-109, Method: Composition-based stats.
Identities = 173/478 (36%), Positives = 256/478 (53%), Gaps = 46/478 (9%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IYNTL R+ +F+ + I MYVCG T+YD+ HIG+AR + FDV+ R LR+
Sbjct: 3 QIYNTLTRQKEQFKPMVDGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGY--N 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+ YVRNITD+DDKII+RA + ++I+ +T + T+ +D L L P +P
Sbjct: 61 LKYVRNITDVDDKIIKRANENK------ESINDLTLRMTKAMHEDFDSLNMLRPDVEPTV 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+ ++I +++ +I GHAY A+ +++FD S+ YG+ S++ + + G+RV
Sbjct: 115 TGHMDEIIEMVERLIAKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQD 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K +P DF+LWK++ EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FPH
Sbjct: 175 KDDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPH 234
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQSCCA+ E N WIH G + + KMSKS NF T+ ++L + +
Sbjct: 235 HENEIAQSCCANNGE-YVNTWIHTGMVQVNKEKMSKSLDNFFTVRDVL-------KEYDP 286
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------AVLSAL 355
+R ++ HYR ++++ + L +A L + I+ A+
Sbjct: 287 ESVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRDVKPIECELESNEFVIKFRKAM 346
Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL------ 401
+D NT A+ L +LA+E + L I +LG+
Sbjct: 347 DDDFNTPEALPVLFELAKELNRVKESDAIQAGQLAFILRTIGEVLGVAQQAPEAFLQGGQ 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ N IE L+ +R K +++AD R L + G ILED T W++
Sbjct: 407 DDNEVATIEALIVKRNDARASKNWAAADEARDALNALGVILEDS------AGKTTWRK 458
>gi|312876620|ref|ZP_07736601.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|311796573|gb|EFR12921.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 465
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 181/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL + EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + +++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGITVF------ELARRFIEEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSESDDKLKAA 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + + ILGI
Sbjct: 345 IEDLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANSCSKEALTFAKDTLKELCGILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV++R K+K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYGAKEEAIPQEILELVEKRNQARKVKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|291522471|emb|CBK80764.1| cysteinyl-tRNA synthetase [Coprococcus catus GD/7]
Length = 466
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 181/483 (37%), Positives = 254/483 (52%), Gaps = 52/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF ++ +RMYVCGPTVY++ HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTLTRRKDEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I+ + ++ KD + TH P+
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVDASV------ISERFIKEAQKDMADMNVKEATHHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +IQ ++ GHAY + + F T S +YG S++ ID+ + G R V
Sbjct: 113 ATEEIDGMIDMIQTLVNKGHAYAVDGTVYFKTRSFKDYGKLSKKNIDDLEAGHREIKVNG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W SPWG GRPGWHIECS MS YLG+ DIH GG DLI
Sbjct: 173 EEGKEDPLDFVLWKPKKEGEPSWPSPWGDGRPGWHIECSVMSKKYLGEQIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + E A+ W+HNGFLN+ KMSKS GNF T+ E+ E
Sbjct: 233 FPHHENEIAQSEACNDKE-FAHYWMHNGFLNINNVKMSKSLGNFFTVREIAE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
+ V+R ML HYR P++F+ + + + L +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEASRNGLERILTAIDRLRTLNLQGDTCTAEENEQ 344
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ +A+ +D NT AI A+ ++ + + + +L
Sbjct: 345 MKVFDALVAKYEAAMEDDFNTADAISAIFEMVKAANIHVTETSTAAFRDQILSEIVRLCD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI+ E + + I+ L+ ER K K F+ AD IR +L +KG IL+D +
Sbjct: 405 VLGIKT--EKKEELLDDEIQALIDERQAARKAKNFARADEIRDELLAKGIILKDTREGVK 462
Query: 451 GQR 453
R
Sbjct: 463 WSR 465
>gi|146295747|ref|YP_001179518.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|187629798|sp|A4XHE2|SYC_CALS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145409323|gb|ABP66327.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 465
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 251/479 (52%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL EF+ ++ ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + Q++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGITVF------ELAERFIQEYYKDADRLNVRRATKSPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I++ G RV
Sbjct: 113 ATEEIEDMIALIQRLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEDLMAGARVDPSEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWNSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAEVALKRIYTCYENLEFLIQNAASSSENDDKLKAA 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + + I ILGI
Sbjct: 345 IEELKAKFIDAMEDDLNTAEATGYLFEMVREINTHANSCSKETLTFAKDILKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV++R K K F AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYSAKEEAIPQEILELVEKRNQARKAKNFLEADRIRDELKSLGYIVLDTPQGTKVER 463
>gi|313667586|ref|YP_004047870.1| cysteinyl-trna synthetase [Neisseria lactamica ST-640]
gi|313005048|emb|CBN86480.1| cysteinyl-trna synthetase (ec 6.1.1.16) (cysteine--trna ligase)
(cysrs) [Neisseria lactamica 020-06]
Length = 473
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+YNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TLYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG+GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGKGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 347
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K N L A I+G+
Sbjct: 348 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|262277058|ref|ZP_06054851.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
gi|262224161|gb|EEY74620.1| cysteinyl-tRNA synthetase [alpha proteobacterium HIMB114]
Length = 448
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 217/467 (46%), Positives = 286/467 (61%), Gaps = 28/467 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI NTL R +F ID NIRMYVCGPTVYD+ H+GNARP+IVFD+L+RLL Y
Sbjct: 1 MALKISNTLTRSKEKFIPIDEKNIRMYVCGPTVYDYPHVGNARPLIVFDLLFRLLSKIYS 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKIIE + + S I +TSK T+ F D L CL PT +
Sbjct: 61 TSKVTYVRNITDIDDKIIEASNKSKIS------IQDLTSKVTKDFHDDCNYLGCLNPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT H+ +MI LI+ +I + AYE+N + F + YG+ S +KI+E G+RV
Sbjct: 115 PKATEHLNEMINLIKKLIQNDFAYESNGHVYFQVTKFKKYGNLSNKKIEELISGSRVEVS 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK P DF+LWK S EP W+SP+G+GRPGWH+ECSAMS YLG FDIHGGGLDLIF
Sbjct: 175 DNKKEPGDFVLWKPSKENEPSWDSPFGKGRPGWHLECSAMSEKYLGNHFDIHGGGLDLIF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ EK +N W+HNG++ +E +KMSKS GNFITINEL +++
Sbjct: 235 PHHENEIAQSTCANNNEKFSNYWLHNGYVTVEKQKMSKSLGNFITINEL-------KKNY 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-TSKGIIDPAVLSALYNDLNT 361
V+RLAML THY +P D+ + L ++ L KW + K I L L +DLNT
Sbjct: 288 NGQVVRLAMLSTHYTQPFDWNEKILDVSQKSLDKWYEFYSDEKEEISEENLKFLLDDLNT 347
Query: 362 VSAIQALHKLARESTKNHDL-LPIFNASAHILGIEVC-------KEHLNKNISIAIEKLV 413
I +H+L +++ L ++S ILG+ + + K + IEKL+
Sbjct: 348 PLMISNIHELYKKAKTGDSLSAKQLSSSCKILGLFNQTHDEWKNFKKIGKITAEEIEKLI 407
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
ER K F ++D IR L SKG +++D K+ +T W+ K
Sbjct: 408 SERNKARSKKDFKTSDEIRDLLVSKGVLIKD-KDG-----ITTWEYK 448
>gi|326795514|ref|YP_004313334.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
gi|326546278|gb|ADZ91498.1| cysteinyl-tRNA synthetase [Marinomonas mediterranea MMB-1]
Length = 461
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 184/483 (38%), Positives = 255/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL + EF+ I I MYVCG TVYDF HIG+AR MI FDV+ R+LR+ +
Sbjct: 1 MLRIYNTLTGQKEEFKPIVEGKIGMYVCGNTVYDFCHIGHARAMISFDVISRILRHLDYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + S +T + + +D L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRAAENG------ELPSDLTERMIEAQQEDEKALGNLPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT + ++I +I+ ++ G AY+++ ++ + S +YG + RK++E G RV
Sbjct: 113 KATEFMQEIINMIKTLVDKGFAYQSDSGDVFYRASRFTDYGKLNNRKLEEMLAGARVEVT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF+LWK E W+SPWG+GRPGWHIECSAMS++ LG FDIHGGG DL F
Sbjct: 173 ESKEHPADFVLWKPVKEGEVHWDSPWGKGRPGWHIECSAMSTNCLGDHFDIHGGGPDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+H G + + KMSKS GNF TI E+L + +
Sbjct: 233 PHHENEIAQSEAATG-KDYVNYWMHCGAVRVNNEKMSKSLGNFFTIREVL-------KLY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSA 354
V+R M+ +HYR PID++ Q L +A++ L + +A
Sbjct: 285 NPEVLRYLMVSSHYRSPIDYSDQSLNDAKVALERLYNALRDQSCSEIPESSDYRTRFTAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------- 399
L +D NT A+ L L R+ K L A +LG+
Sbjct: 345 LNDDFNTPVALSVLFDLVRDLNKAKTESAELAETLAAELTNLASVLGLLYQDADYFLKNG 404
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IEKL++ER K K FS +D IR L KG L D + T W
Sbjct: 405 TFDAEGISADDIEKLIEERKQARKDKNFSRSDEIRDLLAEKGIELLDSR------EGTSW 458
Query: 458 KQK 460
+K
Sbjct: 459 TRK 461
>gi|239625541|ref|ZP_04668572.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47_FAA]
gi|239519771|gb|EEQ59637.1| conserved hypothetical protein [Clostridiales bacterium 1_7_47FAA]
Length = 469
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 177/487 (36%), Positives = 248/487 (50%), Gaps = 55/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF + P ++MYVCGPTVY+ HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTLSRRKEEFVPLTPGEVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E ++ + ++ KD + T P+
Sbjct: 60 -VKYVSNFTDVDDKIIKKAIEEGVDA------DTVSQRYIEECKKDMAAMNVKPATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +IQ +I GHAY + + F T S YG S + +DE + G R V
Sbjct: 113 ATQEICGMLEMIQTLIDKGHAYVAKDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P+DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEEGKEDPSDFVLWKPKKEGEPFWESPWCNGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA+ + A W+HN FLN++ +KMSKS GNF T+ E+
Sbjct: 233 IFPHHENEIAQSECAND-KPFATYWMHNAFLNIDNKKMSKSLGNFFTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
+ V+R ML HYR P++F+ + ++ L + ++
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVDKLRDLEAKAEGAAQTCAE 344
Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
A+ +D NT AI + +L + + D L
Sbjct: 345 QGSMEEAGKLLGRFEEAMDDDFNTADAISVVFELVKLANTTADSGSTKAYVSFLKKNIEQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + IE+++ R K K F+ AD IR +L G +LED +
Sbjct: 405 LCDVLGIIT--EKKEEVLDSDIEEMIAARQQARKDKDFALADEIRGKLLDMGIVLEDTRE 462
Query: 448 PDNGQRM 454
+R+
Sbjct: 463 GVKWKRV 469
>gi|332968931|gb|EGK07978.1| cysteine--tRNA ligase [Kingella kingae ATCC 23330]
Length = 469
Score = 399 bits (1024), Expect = e-109, Method: Composition-based stats.
Identities = 176/484 (36%), Positives = 265/484 (54%), Gaps = 48/484 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R+ +F+ +DP N+RMYVCG TVYD+ H+G+AR ++VFD++ R LR +
Sbjct: 1 MLQIYNTLTRQKEKFEPLDPKNVRMYVCGMTVYDYCHLGHARVLVVFDMIARWLRQHGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII+RA + + I +T + +D+ +L L P +P
Sbjct: 60 -PLTYVRNITDIDDKIIKRANERGIT------IQELTEEFITAMNEDSDKLGVLRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT HIPQMI +I+++I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 113 KATEHIPQMIQMIEDLIANGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM G+ FDIHGGG DL F
Sbjct: 173 TNKRDPLDFVLWKAAKPEEPHWNSPWGKGRPGWHIECSAMGGELFGQTFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADR-----------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
PHHENEIAQSC A I+ W+HNGF+ ++ KMSKS GNF TI ++
Sbjct: 233 PHHENEIAQSCGAHNSSCNHNHGDKIIQSHVKYWLHNGFIRVDNEKMSKSLGNFFTIRDV 292
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
L + + V+R +L HYR P++++ L +A+ L++ T +
Sbjct: 293 L-------KKYQPEVVRFFILRAHYRSPLNYSDAHLDDAKNSLARLYNTLNNVAPAAFEL 345
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK 398
+A+ +D T A+ L +LA E+ K + + A +LG+ +
Sbjct: 346 TENTNEYTRKFFAAMNDDFGTAEAMSVLFELANEANKHNSAEFAGCLKALGGMLGLLQEE 405
Query: 399 EHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + I +L+ +R + K ++ +D IR L + I++D +
Sbjct: 406 PQAFLQSGASDDGLSADEINELIAQRKTARETKNWAESDRIRDVLAAHKIIVKDSADGTT 465
Query: 451 GQRM 454
R
Sbjct: 466 WTRG 469
>gi|170717373|ref|YP_001783468.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
gi|189082066|sp|B0UVH6|SYC_HAES2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|168825502|gb|ACA30873.1| cysteinyl-tRNA synthetase [Haemophilus somnus 2336]
Length = 459
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 255/480 (53%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LRY E
Sbjct: 1 MLKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII RA + + + + + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIRRALENK------ETCEQLVDRMVVEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I GHAY N +++FD S YG SR+ + + + G RV
Sbjct: 113 RATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEIS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ +LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGADLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGN-RYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A L + S
Sbjct: 285 DAESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVSFGGENFIAQFTE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +AI L ++ARE + + L A ILG+
Sbjct: 345 AMNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELASILGLLDQDPEDFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+++R + K ++ AD R +L + G ILED N T W++
Sbjct: 405 GSDDAEIAKIEELIKQRNDARQAKDWARADAARNELTTMGVILEDSSN------GTMWRK 458
>gi|260913075|ref|ZP_05919557.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
gi|260632662|gb|EEX50831.1| cysteine-tRNA ligase [Pasteurella dagmatis ATCC 43325]
Length = 467
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 183/480 (38%), Positives = 262/480 (54%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ F+ I + + MYVCG TVYD H+G+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTREKEIFKPIHANKVGMYVCGITVYDLCHVGHGRTFVCFDVIARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + ++ + + + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALKN------RESCDQLVDRMVAEMYKDFDMLNVLRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I GHAY +N +++F+ S YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIITLVEKLIQRGHAYVSSNGDVMFNVESFKEYGKLSRQNLEQLQAGARVEIV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ KKNP DF+LWK S P EP W+SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 HIKKNPMDFVLWKMSKPEEPSWDSPWGPGRPGWHIECSAMNYKVLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEIAQSCCAHGNQ-YVNYWMHSGMIMVDREKMSKSLGNFFTLRDVLNI-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR P++++ + L A L + + A
Sbjct: 285 DAESVRYFLLNAHYRSPLNYSEENLNLAHTALERLYTALRGTDKSAIACGGENYINAFKE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 345 AMNDDFNTPNAVSVLFEIAREVNKLKNEDMEKANSLAARLRELADILGLLYQDPEEFLQS 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
L+ IE L+++R K +++AD R+QL +LED N T W++
Sbjct: 405 GLDDEEVKLIESLIKQRNEARAAKDWATADAAREQLSKMKVVLEDGAN------GTTWRK 458
>gi|87122362|ref|ZP_01078243.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
gi|86162337|gb|EAQ63621.1| cysteinyl-tRNA synthetase [Marinomonas sp. MED121]
Length = 460
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 177/475 (37%), Positives = 254/475 (53%), Gaps = 41/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL K EF + P + MYVCG TVYD+ HIG+AR MI FD++ R +R+ +
Sbjct: 1 MLKVYNTLSGKKEEFVPLVPGKVGMYVCGNTVYDYCHIGHARAMISFDIIARHIRFSGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITD+DDKII+RA + ++ +T + + +D +L P +P
Sbjct: 61 L--NYVRNITDVDDKIIKRAAEN------DETPESLTLRMIEAQTQDELKLGNKLPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT + ++I +I ++ G AY+ + ++ F T YG + RK+++ G R+ +
Sbjct: 113 KATEFMQEIIDMISVLVDKGFAYQGSTGDVYFRTEKHEAYGKLNNRKLEDMLAGARIDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF+LWK + E W+SPWG GRPGWHIECSAMS++ LG FDIHGGG DL F
Sbjct: 173 SAKENPADFVLWKSAKEGEVHWQSPWGIGRPGWHIECSAMSTNCLGPHFDIHGGGPDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ + N W+H G + + KMSKS GNF T+ ++LE +
Sbjct: 233 PHHENEIAQSECANGTD-YVNYWMHCGAVRVNNEKMSKSLGNFFTVRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------VLSA 354
VIR M+ + YR PID++ Q L EA++ L + + + + D A
Sbjct: 285 NPEVIRFLMVSSQYRSPIDYSEQSLLEAKVGLERMYTSLQGQALTDDYIASSYTERYQQA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH------ 400
+ +D NT AI L L RE K L + A +LG+
Sbjct: 345 MDDDFNTPVAISVLFDLVRELNKAKASAADNAPILAKELSVLAELLGLLGQDPEYFLKNS 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
N IE L+ ER+ K K F+ +D IR +L +G L D + + R
Sbjct: 405 VLNNGISEAEIETLIAERIQARKDKNFARSDEIRDELSEQGITLLDSREGTSWTR 459
>gi|319654847|ref|ZP_08008922.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317393410|gb|EFV74173.1| cysteinyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 467
Score = 398 bits (1023), Expect = e-109, Method: Composition-based stats.
Identities = 166/484 (34%), Positives = 244/484 (50%), Gaps = 49/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ +F I+ ++MYVCGPTVY++ HIGNARP IVFD + R L +
Sbjct: 1 MAIQIYNTLTRQKEDFIPIEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I A + +P I + + +D + L C
Sbjct: 61 D--VQYVSNFTDVDDKLIRVANELGTDVPS------IAERFINAYFEDVSALGCRKADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T I +I IQ +I G AYE+ ++ + T YG S + IDE ++G R+
Sbjct: 113 PRVTESIDIIIEFIQTLIDKGFAYESEGDVYYHTRKFDEYGKLSHQSIDELRVGARIAVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF+LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDSLDFVLWKAAKEGEIAWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFVLVHDII-------QKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
V+R ML HYR PI+++ + L L + + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSDELLENTRTGLERIKTSYHNLQHRKEASVNLTDNNQEWL 344
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + + +D NT +A+ L +L++ + F
Sbjct: 345 DKITSLHEQFIQDMDDDFNTANAVSILFELSKLANYYLMEKNTAVEVIDAFTKEFETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + +E + IE+L+++R K + F AD IR QL+ ILED
Sbjct: 405 VLGLSL-EETNADLLDEEIEQLIEQRQQARKERNFELADKIRDQLKEMNIILEDTPQGIR 463
Query: 451 GQRM 454
+R
Sbjct: 464 WKRG 467
>gi|189423475|ref|YP_001950652.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|229558717|sp|B3E1P0|SYC_GEOLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189419734|gb|ACD94132.1| cysteinyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 487
Score = 398 bits (1023), Expect = e-108, Method: Composition-based stats.
Identities = 193/509 (37%), Positives = 251/509 (49%), Gaps = 73/509 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL + F + MYVCG TVYDF HIG+AR IVFD++YR LR+
Sbjct: 1 MALRLYNTLSGEKEPFVPRVAGKVGMYVCGVTVYDFCHIGHARAGIVFDMIYRYLRFSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY+RN TDIDDKII RA QE I + F +D RL L PT +
Sbjct: 61 D--VTYIRNYTDIDDKIINRANQEGTD------YRTIADRYIATFDEDMDRLGMLRPTIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HI +I +IQ +I +GHAY + ++ F + P Y S R +D+ G RV
Sbjct: 113 PKATDHIEDIISIIQRLIDNGHAYAVDGDVYFAVETFPAYLKLSGRNLDDMLAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK S P EP WESPWG+GRPGWHIECSAMS +LG FDIHGGG DL+F
Sbjct: 173 ERKRNPMDFALWKGSKPGEPWWESPWGKGRPGWHIECSAMSMRFLGPSFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + W+HNGF+N+ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEGANGCQ-FVKYWLHNGFVNINSEKMSKSLGNFFTIREVLEL-------F 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
+R +L HYR P+D++ Q L EA+ LS+ + +
Sbjct: 285 DPETLRFFILQAHYRSPLDYSDQNLREAQAGLSRIYEALAALDQALEKPATAIHLPASAA 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTK---------------NHDLLP 383
+ P A+ +D NT A+ L R + L
Sbjct: 345 EFAEKVAGLLPRFREAMDDDFNTAQALGTLFDSIRTLNRLLAEGGGSSSASRADLEQLRA 404
Query: 384 IFNASAHILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+LG+ E K + IE L+ ER K K F +D I
Sbjct: 405 AVTEIGAVLGLFRIKPSDWLAAREAEKARHLEISPEEIEGLIVERAAARKNKDFKRSDEI 464
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQK 460
R L S+ L D + T WK K
Sbjct: 465 RDYLLSRDIQLVDT------PQGTAWKVK 487
>gi|77360989|ref|YP_340564.1| cysteinyl-tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
gi|109894923|sp|Q3IF51|SYC_PSEHT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|76875900|emb|CAI87121.1| cysteine tRNA synthetase [Pseudoalteromonas haloplanktis TAC125]
Length = 459
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 173/477 (36%), Positives = 256/477 (53%), Gaps = 46/477 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R+ +F+ + I MYVCG T+YD+ HIG+AR + FDV+ R LR+ +
Sbjct: 4 IYNTLTRQKEQFKPMVEGKIDMYVCGITIYDYCHIGHARTFVGFDVIVRYLRHIGYDL-- 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITD+DDKII+RA + ++I+ +T + T+ +D L L P +P T
Sbjct: 62 KYVRNITDVDDKIIKRANENG------ESINDLTVRMTKAMHEDFDSLNMLRPDVEPTVT 115
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
H+ ++I +++ +I GHAY A+ +++FD S+ YG+ S++ + + G+RV K
Sbjct: 116 AHMDEIIEMVERLITKGHAYVAADGDVLFDVSTFEQYGALSQQDLTMLQSGSRVEVAQDK 175
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+P DF+LWK++ EP W SPWG GRPGWHIECSAMSS +LG+ FDIHGGG DL FPHH
Sbjct: 176 DDPLDFVLWKKAKAGEPSWSSPWGEGRPGWHIECSAMSSKHLGEHFDIHGGGSDLQFPHH 235
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQSCCA+ + N WIH G + + KMSKS NF T+ E+L + + A
Sbjct: 236 ENEIAQSCCANNGK-YVNTWIHTGMVQVNKEKMSKSLDNFFTVREVL-------KQYDAE 287
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSALY 356
+R ++ HYR ++++ + L +A L + A+
Sbjct: 288 SVRYFLISGHYRSQLNYSQENLDQARSSLERIYTALRGVEPVACELDDNEYVIKFRKAMD 347
Query: 357 NDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL------N 402
+D NT A+ L +LA+E D L I + + +LG+ +
Sbjct: 348 DDFNTPEALPVLFELAKELNLVKDIDSQQAGQLAFILGSISEVLGVAQQDPEAFLQGGQD 407
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+ +R K +++AD R L + G ILED T W++
Sbjct: 408 DDEVAQIEALIVKRNDARASKNWAAADEARDALSALGVILEDS------AGKTTWRK 458
>gi|242372747|ref|ZP_04818321.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
gi|242349520|gb|EES41121.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
Length = 466
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFNGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------------TSTS 343
V+R M+ HYR PI++ ++ + A L +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHTEYMNQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + ++ + +L
Sbjct: 345 IDEILKQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVFNKFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + ++ + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGKEADELLDEEIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|291546868|emb|CBL19976.1| cysteinyl-tRNA synthetase [Ruminococcus sp. SR1/5]
Length = 469
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 182/486 (37%), Positives = 255/486 (52%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF ++ ++MYVCGPTVY+ HIGNARPMI+FD + R + Y E
Sbjct: 1 MKIFNTLTRRKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTVRRYMEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+++ ++ KD + T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVSAE------EISTRYIKECKKDMADMNVKPATTAPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I MI +IQ +I G+AY A+ + F YG S + +D+ + G R V
Sbjct: 113 ATQEIQGMIDMIQTLIDKGYAYPAADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLKVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP W SPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPSWPSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS C + + A W+HNGFLN++ RKMSKS GNF T+ ++ G
Sbjct: 233 IFPHHENEIAQSECCNG-KIFARYWMHNGFLNIDNRKMSKSLGNFRTVRQI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
+ V+R ML HYR P++F+ + A+ L + + +
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMEAAKNSLERILEAAGKLSDRKDNGAAENITEEE 344
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
+A+ +D NT A+ A+ +L + + N D L
Sbjct: 345 LALLKEAEGFVAKFEAAMDDDFNTADALAAIFELVKFANTNVDENSSREFAGGLYEELFK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ +LG+++ E + + IE L+QER K K F AD IR +L KG IL+D +
Sbjct: 405 LSDVLGLKI--EKKEEILDKEIEDLIQERQAARKAKDFQRADEIRDELLKKGIILKDTRE 462
Query: 448 PDNGQR 453
QR
Sbjct: 463 GVKWQR 468
>gi|294496962|ref|YP_003560662.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|294346899|gb|ADE67228.1| cysteinyl-tRNA synthetase [Bacillus megaterium QM B1551]
Length = 465
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 165/489 (33%), Positives = 251/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNTL R+ F ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +
Sbjct: 1 MAIKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A++ +P I ++ + +DT+ L C
Sbjct: 61 D--VEYVSNFTDVDDKLIKAAKELGEDVPT------IANRFIDAYFEDTSALGCKHADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I ++ G+AYE+ ++ + T YG S + IDE + G R+
Sbjct: 113 PRVTENMDIIIEFIDELVKKGYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
++R +L HYR PI++ + L + +
Sbjct: 285 DPSLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWF 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + + +D NT +AI L +LA+++ + F
Sbjct: 345 EKLKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+GI + L + I++L+Q R+ K + F AD IR +L++K ILED
Sbjct: 405 AIGITFGEAEL---LDEEIDQLIQGRIQARKDRNFQLADQIRDELKAKNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|188584813|ref|YP_001916358.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349500|gb|ACB83770.1| cysteinyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 469
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 173/493 (35%), Positives = 257/493 (52%), Gaps = 59/493 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK IK++NT+++K EF + MYVCGPTVYD+ H+GNAR ++FDV+ R L Y
Sbjct: 1 MKMSIKLFNTMKKKKEEFVPKQEGKVDMYVCGPTVYDYFHVGNARAFLIFDVVRRYLDYK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYV+NITDI+DK+I RA ++ ++ + + K T ++ D +
Sbjct: 61 GYQ--VTYVQNITDIEDKMINRANEDGITV------AELAEKYTSEYFDDARAIGIKDAD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H P+AT HI ++I +IQ+++ G+AY ++ FDT++ +YG R+ +E G RV
Sbjct: 113 HHPKATEHIAEIIEIIQDLLDKGYAYRQGGDVYFDTAAFDDYGKLCRQDPEELVSGARVA 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KKNPADF+LWK EP W+SP+G+GRPGWHIECSAMS YL DIH GG DL
Sbjct: 173 VDDRKKNPADFVLWKSKKEGEPAWDSPFGQGRPGWHIECSAMSMKYLDTPLDIHAGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENE+AQS A + W+H G+L ++ RKMSKS GNF+T+ + +
Sbjct: 233 VFPHHENEVAQSEAATG-QDFCKYWMHVGYLEIDNRKMSKSMGNFLTVRDF-------RQ 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------ 354
+ V+RL ++ HYR P++FT + + +A+ L + +
Sbjct: 285 KYDPRVLRLFLMSAHYRSPLNFTDELIEQAKSSLDRLDNFYNNLKFYLEKSREQELTDKE 344
Query: 355 -----------------LYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFN 386
+ +D NT SA+ + LA+E + +
Sbjct: 345 QDIMEYLKQARTEFEAAMDDDFNTASALAVIFSLAKEINSYIGNGGENALVFKNTYDLLL 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
++G+ ++ + IE+ +QER K K F AD IR +L +G ILED
Sbjct: 405 EFDQVMGLLP---ETDEILPEEIEQKIQEREQARKQKDFQRADAIRDELRDRGIILEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
RWK+
Sbjct: 461 -----PEGVRWKR 468
>gi|316983974|gb|EFV62953.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 587
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 117 TIYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 174
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 175 LTYVRNITDIDDKIIARAAENG------ETIGKLTARFIQAMHEDADALGVLRPDIEPKA 228
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 229 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 288
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 289 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 348
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 349 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 408
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 409 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 461
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 462 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQ 521
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 522 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 578
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 579 ---AGGTTWRR 586
>gi|295702329|ref|YP_003595404.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799988|gb|ADF37054.1| cysteinyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 465
Score = 398 bits (1022), Expect = e-108, Method: Composition-based stats.
Identities = 164/489 (33%), Positives = 251/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNTL R+ F ++ + ++MYVCGPTVY++ HIGNARP IVFD + R L +
Sbjct: 1 MAIKLYNTLTRQKETFVPLEENKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A++ +P I ++ + +DT+ L C
Sbjct: 61 D--VEYVSNFTDVDDKLIKAAKELGEDVPT------IANRFIDAYFEDTSALGCKHADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I ++ +AYE+ ++ + T YG S + IDE + G R+
Sbjct: 113 PRVTENMDIIIEFIDELVKKEYAYESEGDVYYRTRKFEGYGKLSHQSIDELQSGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKEDPLDFTLWKATKDGEIAWDSPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KSFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
++R +L HYR PI++ + L + +
Sbjct: 285 DPSLLRFFILSVHYRHPINYNEEILENTRKGFERLQTAYGNLTHRLEAATNLQEDASEWF 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + + +D NT +AI L +LA+++ + F
Sbjct: 345 EKLKELRETFVEEMDDDFNTANAISVLFELAKQANLYLLEQTTSTDVIEAFIKEFKELGT 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+GI + L + I++L+Q+R+ K + F AD IR +L++K ILED
Sbjct: 405 AIGITFGEAEL---LDEEIDQLIQDRIQARKDRNFQLADQIRDELKAKNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|319425887|gb|ADV53961.1| cysteinyl-tRNA synthetase [Shewanella putrefaciens 200]
Length = 459
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I+P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSITRQKQEFKPINPGKIGMYVCGVTIYDLCHIGHGRTFVSFDMIVRYLRYVGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + + +D L L P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRANEN------NESCEALTERLIGEMHRDFDALNMLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ ++ GHAY ++ +++F +S P+YG S + +D+ + G RV
Sbjct: 113 RATLHIAEIIDMVELLLARGHAYVASDGDVLFSVASYPDYGRLSGQNLDQLQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 ENKQNPMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGLHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAIKDVDLTVAAAPAEEFIAKFKA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + R+ K L A +LG+ K
Sbjct: 345 AMDDDFNTPEAYSVLFDMVRDINRLKATDIAKASALAVAMKQLADVLGLLGQDPDAFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K + +AD R +L+ G +LED G T W++
Sbjct: 405 EGSDDEVAEIEALIVERNRARSEKDWVAADVARNRLDILGVVLED------GPSGTTWRK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|160937871|ref|ZP_02085229.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
BAA-613]
gi|158439097|gb|EDP16851.1| hypothetical protein CLOBOL_02763 [Clostridium bolteae ATCC
BAA-613]
Length = 469
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 180/486 (37%), Positives = 250/486 (51%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL RK EF + P ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTLSRKKEEFVPLTPGEVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E ++ + ++ KD + T P+
Sbjct: 60 -VRYVSNFTDVDDKIIKKAIEEGVDA------DTVSRRYIEECKKDMAAMNVKPATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +IQ +I HAY A + + F T S YG S + +DE + G R V
Sbjct: 113 ATQEICGMLEMIQTLIDKNHAYVAGDGTVYFRTGSFKEYGKLSHKNLDELQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEEGKEDPNDFVLWKPKKEGEPFWESPWCDGRPGWHIECSVMSKRYLGEQIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA+ + A W+HN FLN++ +KMSKS GNF T+ E+
Sbjct: 233 IFPHHENEIAQSECAND-KNFATYWMHNAFLNIDNKKMSKSLGNFFTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ V+R ML HYR P++F+ + ++ L +
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTCVEKLRDLEAKASDSSKTAGE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
T + A+ +D NT AI A+ +L + + D + +
Sbjct: 345 QATMEEADKLRGKYEEAMDDDFNTADAISAIFELVKLANTTADESGTREFVSYMKTMIEE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + IE++++ R K K F+ AD IR +L G +LED +
Sbjct: 405 LCDVLGIIT--EKKEEVLDSEIEEMIEARQQARKDKNFALADEIRGKLLDMGIVLEDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|153814444|ref|ZP_01967112.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
gi|145848840|gb|EDK25758.1| hypothetical protein RUMTOR_00656 [Ruminococcus torques ATCC 27756]
Length = 469
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 182/486 (37%), Positives = 252/486 (51%), Gaps = 54/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL ++ EF ++ ++MYVCGPTVY+F HIGNARPMI FD + R Y E
Sbjct: 1 MMKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII++A +E S I+ + + KD + T P
Sbjct: 61 --VNFVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIAECKKDMEAMNVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +I +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 LATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A+ E A W+HNGFLN++ +KMSKS GNF T+ E+ G
Sbjct: 233 IFPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ ++R ML HYR P++F+ + + A+ L +
Sbjct: 285 KYDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
+ A A+ +D NT AI A+ L + D LL
Sbjct: 345 KRLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI V KE + + IE+++++R K + F+ AD IR +L +KG ILED +
Sbjct: 405 LTDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTRE 462
Query: 448 PDNGQR 453
++
Sbjct: 463 GVKWKK 468
>gi|221134802|ref|ZP_03561105.1| cysteinyl-tRNA synthetase [Glaciecola sp. HTCC2999]
Length = 459
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 168/480 (35%), Positives = 250/480 (52%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL R+ F ++P+ + MYVCG TVYD +H+G+AR + FDV+ R LR+ E
Sbjct: 1 MLHIFNTLTREKAPFVPLEPNKVGMYVCGITVYDLSHMGHARTYLSFDVMVRYLRHMGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII+RA + N+ +S +T + +D L L P +P
Sbjct: 61 --VKYVRNITDVDDKIIQRAIEN------NETMSQLTERTVAMMHEDFAALNLLPPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T H+ ++I +I+ ++ GHAY ++ +++FD S+ +YG+ S++ +D+ + G RV
Sbjct: 113 RVTTHMAEIIEVIEKLVAKGHAYVASSGDVLFDVSTFKDYGALSKQDLDQLQSGARVAVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK++ EP W SPWG GRPGWHIECSAM+ +LGK FDIHGGG DL F
Sbjct: 173 DGKDDPMDFVLWKKAKANEPSWSSPWGEGRPGWHIECSAMNHKHLGKHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N W+H G + ++ KMSKS GNF T+ +LE
Sbjct: 233 PHHENEVAQSCCAFDT-PYVNTWVHTGMVQVDNEKMSKSLGNFFTLRSVLEQHHK----- 286
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIIDPAVL 352
+R ++ HYR + ++ L +A+ L + G
Sbjct: 287 --ETLRFFLMSAHYRSQLSYSQDNLEQAQSGLERLYTALRDVTPDSRTELGYGGYLARFE 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-----E 399
+A+ +D NT A L A++ K L + + ILG +
Sbjct: 345 AAMNDDFNTPIAFSVLFDCAKDLNKAKSTDPAEASRLAQVLISLGAILGCLQDDPVNFLQ 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
A+ L+ +R K + +AD R L + G ++ED T W++
Sbjct: 405 SDADIDGEAVAALIAQRNQARADKDWGAADAARDALTAMGVVIEDSAT------GTTWRK 458
>gi|284006809|emb|CBA72076.1| cysteinyl-tRNA synthetase [Arsenophonus nasoniae]
Length = 504
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 189/490 (38%), Positives = 262/490 (53%), Gaps = 52/490 (10%)
Query: 1 MKK--KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
M+K +KIYNTL R+ EF+ I P I MYVCG T+YD HIG+ R + FDV+ R LR
Sbjct: 37 MEKVSMLKIYNTLSRQKEEFRPITPGKIGMYVCGVTIYDLCHIGHGRTFVAFDVISRYLR 96
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
Y + TYVRNITD+DDKII+RA + N+ +TS+ + KD L L
Sbjct: 97 YLGYDL--TYVRNITDVDDKIIKRAAEN------NETCDALTSRMLIEMYKDFDALNILR 148
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
P +P AT+HI ++I L + ++ GHAY N +++F +S P+YG SR+ +++ + G
Sbjct: 149 PDFEPNATHHIKEIIALTERLLKRGHAYIADNGDVMFAINSDPDYGLLSRQDLEQLQAGA 208
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
RV K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG
Sbjct: 209 RVEVADVKRNPLDFVLWKMSKPNEPSWSSPWGDGRPGWHIECSAMNGKQLGEHFDIHGGG 268
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENEIAQS CA+ N W+H G + ++ KMSKS NF TI ++L
Sbjct: 269 ADLMFPHHENEIAQSTCAND-GPYVNYWMHTGMVMVDREKMSKSLNNFFTIRDVLA---- 323
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGII 347
+ A +R +L HYR +++T + L +A L + I
Sbjct: 324 ---HYDAETVRYFLLSGHYRSQLNYTEENLKQARTSLERLYTALRDTDANHVKSADNEIF 380
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE 399
++A+ +D NT A L LARE + ++L A+ILG+
Sbjct: 381 KQRFMAAMNDDFNTPEAYSVLFDLAREINRLKVDDMAMANELAVQLRQLANILGLLTQNP 440
Query: 400 H---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ IE L+++R K K ++ AD R +L G ILED
Sbjct: 441 EQFLQSRAQVSHSAEIEKIEALIKQRNDARKNKFWAQADSARDELTRMGIILEDS----- 495
Query: 451 GQRMTRWKQK 460
+ T W++K
Sbjct: 496 -PQGTVWRRK 504
>gi|317500158|ref|ZP_07958391.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|331087615|ref|ZP_08336543.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
gi|316898447|gb|EFV20485.1| cysteine-tRNA ligase [Lachnospiraceae bacterium 8_1_57FAA]
gi|330399794|gb|EGG79454.1| cysteinyl-tRNA synthetase [Lachnospiraceae bacterium 3_1_46FAA]
Length = 468
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 182/485 (37%), Positives = 252/485 (51%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL ++ EF ++ ++MYVCGPTVY+F HIGNARPMI FD + R Y E
Sbjct: 1 MKIYNTLSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIAFDTVRRYFEYKGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E S I+ + + KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKAIEEGVSA------DEISKRYIAECKKDMEAMNVKPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +I +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVEMISTLIEKGYAYEKNGTVYYRTRKFEGYGKLSHKNLDDLRSGGRSLLVTG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG+ DIH GG DLI
Sbjct: 173 EDEKEDPLDFVLWKPKKEGEPAWESPWSEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HNGFLN++ +KMSKS GNF T+ E+ G
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVREI-------GEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------P 338
+ ++R ML HYR P++F+ + + A+ L +
Sbjct: 285 YDLQILRFFMLSAHYRSPLNFSAELMEAAKNSLERILTAADNLKFLISNTSEEKMTESEK 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+ A A+ +D NT AI A+ L + D LL
Sbjct: 345 RLFEKSSEYVEAFERAMDDDFNTADAIAAIFDLVKYMNTTADGASSKEYLQNLLDRLCLL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI V KE + + IE+++++R K + F+ AD IR +L +KG ILED +
Sbjct: 405 TDVLGIIVIKEE--EMLDSEIEEMIEKRQAARKDRNFALADQIRDELLAKGIILEDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VKWKK 467
>gi|256823180|ref|YP_003147143.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796719|gb|ACV27375.1| cysteinyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 465
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 239/487 (49%), Gaps = 52/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN L R+ F+ ++ + MYVCG T YD HIG+AR FDV+ R L++ +
Sbjct: 1 MLQIYNNLTRQKEPFKPMEEGKVSMYVCGVTTYDLCHIGHARTYAAFDVINRFLKFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + + S +T + Q+ +D + P +P
Sbjct: 61 --VTYVRNITDIDDKIINRANENG------EDFSELTERFIQEMYQDFDAIGLQRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + ++I + Q +I G AY N ++ F + +YG S++ + + G RV
Sbjct: 113 RATQTMDEIIQMTQTLIEKGAAYATDNGDVYFHVPAFKDYGKLSKQDLTQLNAGERVDVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 173 DIKKDPMDFALWKSSKPGEPSWDSPWGKGRPGWHIECSAMSKKCLGDTFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ A +WIH G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSECANDC-TFARVWIHTGMVQVDKEKMSKSLGNFFTIRDVL-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------SKGIIDP 349
+R ++ HYR + +T L A+ L + +
Sbjct: 285 RPESVRYFLMSGHYRSQLSYTQANLESADASLERLYTSLRGVDFNRATDDKLGILEQAQL 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH- 400
A+ +D N A+ L LA+E + + A +L +
Sbjct: 345 RFTEAMDDDFNVPEAMPVLFDLAKEVNRLKATDMATAATIAVKIKELAGVLSLLQQDPES 404
Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I+ L+Q+RL K + AD IR +L + LED
Sbjct: 405 FLKSGAGDSDVSDEDIDSLIQQRLQARADKNWDLADEIRDKLHAMNIELED------AAG 458
Query: 454 MTRWKQK 460
T W++K
Sbjct: 459 GTSWRRK 465
>gi|154485049|ref|ZP_02027497.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
gi|149734002|gb|EDM50121.1| hypothetical protein EUBVEN_02770 [Eubacterium ventriosum ATCC
27560]
Length = 470
Score = 397 bits (1021), Expect = e-108, Method: Composition-based stats.
Identities = 177/485 (36%), Positives = 253/485 (52%), Gaps = 52/485 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL +K EF ++ ++MYVCGPTVY+ HIGNARPMI+FD R L Y +
Sbjct: 1 MKIYNTLTKKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIIFDTFRRYLEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E + I+ + ++ KD L T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGTTAE------EISQRYIKECKKDMHDLNIEPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I+ +I G+AY+A+ + + T +YG S++ ID+ + G R V
Sbjct: 113 ATQEIDGMIEMIKTLIDKGYAYDADGTVYYRTRKFKDYGKLSKKNIDDLEAGHRDIKVAG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK EP W SPW GRPGWHIECS MS YLG DIH GG DLI
Sbjct: 173 EESKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLGDEIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E + W+HNGFLN+ +KMSKS GNF T+ ++
Sbjct: 233 FPHHENEIAQSEAANGCE-FSKYWMHNGFLNINNKKMSKSLGNFFTVRDI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------- 341
+ V+R ML HYR P++F+ + A+ L + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSDDLMESAKNGLERIITSGAKIRDIISNGKDGKVTDAEA 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT +AI A+ +L + + N + + I +
Sbjct: 345 KLLDEAKEYITKFEEAMDDDCNTANAISAVFELVKFANSNLNEGSTKEFAAGVYEILDKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
++LGI + KE IE+++ +R K + F+ AD IR +L +KG +L+D +
Sbjct: 405 CNVLGIILEKEEEKVGDEDYIEEMIAKRAQAKKDRDFAMADQIRDELAAKGIVLKDTREG 464
Query: 449 DNGQR 453
R
Sbjct: 465 TKWSR 469
>gi|94499488|ref|ZP_01306025.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
gi|94428242|gb|EAT13215.1| cysteinyl-tRNA synthetase [Oceanobacter sp. RED65]
Length = 460
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 181/482 (37%), Positives = 249/482 (51%), Gaps = 46/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R+ EF+ + P I MYVCG TVYDF H+G+AR M+ FDV+ R LR+
Sbjct: 1 MALQIYNTLSRQKEEFKPLQPGKIGMYVCGMTVYDFCHMGHARVMVSFDVIVRYLRHKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y+RNITDIDDKII+RA + + + + +D +L L P +
Sbjct: 61 D--VNYIRNITDIDDKIIQRAAENG------EPFEQLVDRMVDAMNEDFAKLNILTPNSE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI +I +++ +I G AY N ++ + YG S + ++E + G R+
Sbjct: 113 PRATQHIDGIIKMVETLIEKGFAYAAKNGDVYYRVRKFDGYGKLSGKILEELESGARIAV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK + P EP W+SPWG+GRPGWHIECS MS+ LG FDIHGGG DL
Sbjct: 173 EEEKEDPLDFVLWKSAKPEEPSWDSPWGQGRPGWHIECSVMSTCCLGNNFDIHGGGPDLK 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A AN W+H G L ++G KMSKS GNF TI ++LE
Sbjct: 233 FPHHENEIAQSEAATGEH-YANTWMHAGALRIDGEKMSKSLGNFFTIRDILE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IID 348
+ A VIR + YR I+++ L +AE L +
Sbjct: 285 YDAEVIRFFLSSVQYRSAINYSEDGLKDAEAKLDRLYNAIHGCDLSAVIDEQDAVVQDTR 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHL-- 401
+A+ +D NT AI L L E K L + + ILG
Sbjct: 345 ERFEAAMDDDFNTPKAIAVLFDLVNEINKKEGAEKNPLAALLVELSSILGCLQSDPDNYL 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
I+ +QER K K F+ AD IR+ L+++G IL+D + T W
Sbjct: 405 QRGVTLDDAYIQGKIQERAQAKKDKDFALADKIREDLDAQGIILQDSR------EGTTWV 458
Query: 459 QK 460
+K
Sbjct: 459 KK 460
>gi|57634618|ref|NP_371054.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
Length = 476
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 257/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 10 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 70 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 242 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 473
Query: 452 QRM 454
+R
Sbjct: 474 KRG 476
>gi|328544357|ref|YP_004304466.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [polymorphum
gilvum SL003B-26A1]
gi|326414099|gb|ADZ71162.1| Cysteine tRNA synthetase (Cysteine--tRNA ligase) [Polymorphum
gilvum SL003B-26A1]
Length = 514
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 254/506 (50%), Positives = 316/506 (62%), Gaps = 49/506 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +++YNTL R +F IDP+N+RMYVCGPTVYDFAHIGNARP IVFDVLYRLLR+ YG
Sbjct: 9 KGLRLYNTLTRAKQDFVPIDPANVRMYVCGPTVYDFAHIGNARPAIVFDVLYRLLRHLYG 68
Query: 63 EKCVTYVRNITDIDDKIIERARQ------EHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
VTYVRNITD+DDKI RA + E + +NDAI+ +T K Q+ D + L C
Sbjct: 69 ADRVTYVRNITDVDDKINARALRDFGPEIEAGRMSLNDAIARVTEKTADQYHSDVSALGC 128
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
L PTH+PRAT HI MI +I +I GHAYEA E++FD +S+P YG S+R +DEQ G
Sbjct: 129 LPPTHEPRATEHIEGMIVMIGTLIERGHAYEAAGEVLFDVASMPAYGGLSKRNLDEQIAG 188
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
RV HKKNP DF+LWK+S+ EPGW SPWGRGRPGWHIECS MS H+LGKVFDIHGG
Sbjct: 189 ARVAVDSHKKNPGDFVLWKQSSAEEPGWGSPWGRGRPGWHIECSVMSEHHLGKVFDIHGG 248
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDLIFPHHENEIAQSCCA +K AN W+HNGF+ +EGRKMSKS GNF+TI++LL T
Sbjct: 249 GLDLIFPHHENEIAQSCCAHGTDKMANYWLHNGFVQVEGRKMSKSEGNFVTIHDLLHTDT 308
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
FGGR WP V+RLAMLMTHYREPIDF+V+RL EA L+ W +
Sbjct: 309 FGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANANLTNWLRQIDEHVLSRNSPTAYSA 368
Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASAH 390
+ + + L +DL + I LH ++ + + L
Sbjct: 369 ILDAAQNNDQNDNLAISVEVLSDDLAMPNVIAQLHGMSTDISLGVRSPRSLAWDMMGILG 428
Query: 391 ILG-IEVCKEHLNKNISIAIEKLVQERLI---------------LLKMKKFSSADYIRKQ 434
LG I+ K + + + ERL L+K K F+ AD IR
Sbjct: 429 FLGIIDAEVLRRQKVEPEGLSQRIAERLAIQDAADAAKAAGDKDLMKQK-FAEADRIRAD 487
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
L ++G +L+D K+P GQR+T W+ K
Sbjct: 488 LAAEGILLKDGKDPQTGQRVTTWEVK 513
>gi|148266184|ref|YP_001232890.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|189082065|sp|A5G949|SYC_GEOUR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146399684|gb|ABQ28317.1| cysteinyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 494
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 191/516 (37%), Positives = 259/516 (50%), Gaps = 80/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL +F I+P ++MYVCG TVYD HIG+AR +VFDV+YR LR
Sbjct: 1 MALRVYNTLTGTKEDFVPIEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYLRSLGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII RA +E A I+ + ++F +D +L L PT Q
Sbjct: 61 E--VNYVRNYTDIDDKIINRANREGV------AYDAISERFIKEFDRDMAQLGLLLPTSQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HIP++I L+Q +I G AY+ ++ F Y S+R +++ + G R+
Sbjct: 113 PKATEHIPEIITLVQTLIDKGFAYQMGGDVNFCVEKFDPYLKLSKRNLEDMQAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 ERKRHPMDFVLWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI E+L+ +
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEVLD-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
+ V+R +L HYR P+DF+ Q LTEAE + + +
Sbjct: 285 DSEVLRFFLLSAHYRSPLDFSDQNLTEAETGMERIYKALVAIDETLASNPATGGEEIDAS 344
Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------- 378
G + A+ +D NT A+ + L R +
Sbjct: 345 SLGEAERELFDKSGSLPLRFREAMDDDFNTALAMGHIFDLVRCVNRVLSEAKERSNTLSA 404
Query: 379 --HDLLPIFNASAHILGIEV---------CKEHLNKNIS---IAIEKLVQERLILLKMKK 424
+ A +LGI K+ + IE+L+ ER K K
Sbjct: 405 LCAQVKANIGKIADVLGIFTSEPASLLTRLKDRKASELDISVEEIERLITERAAARKAKD 464
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
F +D IR L K +L D + T W K
Sbjct: 465 FKRSDEIRDFLLGKNIVLLDS------AQGTSWSVK 494
>gi|313884762|ref|ZP_07818517.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
gi|312620023|gb|EFR31457.1| cysteine--tRNA ligase [Eremococcus coleocola ACS-139-V-Col8]
Length = 475
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 171/497 (34%), Positives = 242/497 (48%), Gaps = 63/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ +F P+ + MYVCGPTVY++ HIGNAR + FD + R L+Y
Sbjct: 1 MTIQIYNTLTRQKEDFVPQVPNQVSMYVCGPTVYNYIHIGNARSAVAFDTVRRYLQYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDKII+ A+ E S ++ K F +DT + L
Sbjct: 61 Q--VNYVSNFTDVDDKIIKAAKAEDLSTE------ALSDKYIAAFKEDTAAINILPANIH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +HI ++I I+ +I HAY + ++ F T S YG S + I E ++G
Sbjct: 113 PRVKDHITEIIDYIKVLIESDHAYASQGDVYFRTQSFDGYGKLSHQSISELEIGASQRTD 172
Query: 183 ----YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK + E W SPWG GRPGWHIECS MS+ YLG DIHGGG
Sbjct: 173 TAETDRKEDPLDFALWKSAKEGEVSWPSPWGPGRPGWHIECSVMSTKYLGDTLDIHGGGQ 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKK 296
DL FPHHENEIAQ+ + E AN W+HNGF+ KMSKS GNF+ + +LL
Sbjct: 233 DLEFPHHENEIAQAEAHNHGENFANYWMHNGFVTFGEDGEKMSKSLGNFVLLRDLL---- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------- 345
+ V+R + HYR P+ + Q L EA+ + + + S
Sbjct: 289 ---KEADPMVVRYLLGTVHYRRPLRYDDQALQEAQTNIKRLEEVSRRLDLRLADATTQAN 345
Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLL 382
++ + A+ +D N + + + +L +E + +
Sbjct: 346 LDTDEANLAVLAQLEADFIQAMDDDFNAANGMTVIFELVKEINRYLQSEVVSEKVLSKMQ 405
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
IF I G+ E + I+ L+ ER + K K F AD IR QL+ +G L
Sbjct: 406 EIFKDLLAIFGLVF--ETKEDLLDQEIQALIDERNVARKAKDFGRADEIRDQLKEQGIYL 463
Query: 443 EDYKNPDNGQRMTRWKQ 459
+D + T WK+
Sbjct: 464 DDT------PQGTTWKR 474
>gi|257795372|ref|ZP_05644351.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|258408941|ref|ZP_05681222.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|258420421|ref|ZP_05683364.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|258439342|ref|ZP_05690274.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|258444082|ref|ZP_05692419.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|258446350|ref|ZP_05694508.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|258448443|ref|ZP_05696558.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|258453799|ref|ZP_05701773.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282894964|ref|ZP_06303187.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|282928866|ref|ZP_06336457.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|257789344|gb|EEV27684.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|257840292|gb|EEV64755.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|257843611|gb|EEV68017.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|257847679|gb|EEV71678.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|257850752|gb|EEV74697.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8115]
gi|257854944|gb|EEV77889.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|257858312|gb|EEV81199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|257864055|gb|EEV86809.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|282589474|gb|EFB94563.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A10102]
gi|282762646|gb|EFC02783.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8117]
Length = 471
Score = 397 bits (1020), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 257/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|153813240|ref|ZP_01965908.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
gi|149830653|gb|EDM85744.1| hypothetical protein RUMOBE_03656 [Ruminococcus obeum ATCC 29174]
Length = 469
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 172/486 (35%), Positives = 246/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ R+ EF ++ +RMYVCGPTVY+ HIGNARPMI+FD + R L Y +
Sbjct: 1 MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVSAE------EISQRYIAECKKDMAGMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RVP 180
AT I MI +IQ +I +AY A+ + F YG S + +D+ + G +V
Sbjct: 113 ATQEIDGMIDMIQTLIDKEYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP W+SPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS C + + A W+HN FLN++ RKMSKS GNF T+ E+ G
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVREI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ V+R ML HYR P++F+ + ++ L +
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITEAAARLRDRQAAATVQEATEDE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNA 387
+ + ++ +D NT A+ A+ +L + + N L +
Sbjct: 345 KKLMQEEAAFVTKFEESMDDDFNTADALAAVFELVKFANTNVQEGSSKEFAGHTLEVMTK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ + E + + IE L+ ER K K F+ AD IR L KG L+D +
Sbjct: 405 LCDVLGLTL--EKKEEILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|282915852|ref|ZP_06323617.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
gi|282320148|gb|EFB50493.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
Length = 471
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 258/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|307243392|ref|ZP_07525549.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306493202|gb|EFM65198.1| cysteine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 467
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 259/488 (53%), Gaps = 55/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ RK EF ++ ++MYVCGPTVY+F H+GNARP VFD L R Y E
Sbjct: 1 MKIYNTMTRKKEEFIPLEEGKVKMYVCGPTVYNFIHLGNARPFTVFDTLRRYFEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY++N TD+DDKII+R+ +E S + K +++ D L T P+
Sbjct: 60 -VTYIQNFTDVDDKIIKRSHEEGIS------PEEVAEKYIKEYFIDCDGLGIKRATVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T++I +I +Q++I G+AYEA +++F T YG S + I+E ++G R+
Sbjct: 113 VTDNIDNIIVFVQDLIDKGYAYEAGGDVLFRTRKFKEYGKLSHQNIEELELGARIDVDDK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EPGW+SPWG GRPGWHIECS MS+ YLG DIH GG DL FPH
Sbjct: 173 KEDPLDFVLWKAKKEGEPGWQSPWGEGRPGWHIECSVMSNRYLGNTIDIHAGGQDLQFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C + A W+HNG++N++G KMSKS GNF T+ ++ +
Sbjct: 233 HENEIAQSECRNG-HTFARYWMHNGYINVDGEKMSKSLGNFFTVRDI-------SNKYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
++R +L T YR P++F+ L +A+ L + + I
Sbjct: 285 GLVRFFLLATQYRNPVNFSDTVLEQAKAGLERLTNARDNAEFILGNLADSSLRDEEKDMV 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +DLNT AI + +LA+ N L IFN +
Sbjct: 345 AGLDKYRERFIEAMDDDLNTADAISVIFELAKFMNTNISDQSSKEFVQLNLDIFNELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I + ++S +E L+ +R K K F+ AD IR +L + G +ED +
Sbjct: 405 LNIANKSVEEDDSLSQKVEDLIAKRAQAKKEKNFALADQIRDELTAMGIAIEDTR----- 459
Query: 452 QRMTRWKQ 459
+ +WK+
Sbjct: 460 -QGVKWKR 466
>gi|119713265|gb|ABL97331.1| cysteinyl-tRNA synthetase [uncultured marine bacterium HF10_12C08]
Length = 454
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 210/474 (44%), Positives = 287/474 (60%), Gaps = 36/474 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T +F+ IDP+N+RMYVCGPTVYD+AH+GNARP+IVFD+L+RLL+ YG
Sbjct: 1 MDLMLYDTFTNSKKKFEPIDPNNVRMYVCGPTVYDYAHVGNARPVIVFDILFRLLQKIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKII A + N+ I ++T K F D + L PT +
Sbjct: 61 SGNVTYVRNITDVDDKIILAANDQ------NEDIGMLTEKTINYFHDDAKYVGALKPTFE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI LI+ +I AY A+ ++F ++ YG S + +DE G+RV +
Sbjct: 115 PRATEHIPEMIELIEKLISKEFAYVADGNVLFSSNKFKEYGKLSGKNLDEMVAGSRVGVE 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK +DF+LWK S EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGG DLIF
Sbjct: 175 SYKKEESDFVLWKPSKEDEPSWKSPWGDGRPGWHIECSAMSEKLLGENFDIHGGGQDLIF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ + AN W+HNGF+ +EG KMSKS+GNF+T+NEL ++ +
Sbjct: 235 PHHENEIAQSECANNNK-FANYWVHNGFVTVEGNKMSKSDGNFVTVNELKDS-------F 286
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------KGIIDPAVLSAL 355
VIRL M+ THYR+P+++T L E++ L KW ++ D ++ L
Sbjct: 287 QGEVIRLTMISTHYRQPLNWTKDNLNESKKTLDKWYTFLSNFNGDELKDANNDNEIMETL 346
Query: 356 YNDLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKE-----HLNKNIS--- 406
+D+NT AI LH+ +E + L+ F SA++LG+ K +N++
Sbjct: 347 LDDMNTPKAISVLHQKFKECQSGDKGLVSNFLYSANMLGLLNEKPSEWLSWKKENLNINT 406
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+E L+ +R K F AD IR +L+ G ILED + T WK K
Sbjct: 407 AQVELLIAQRNEARSNKNFDDADRIRNELDKMGVILEDQGD------ETTWKVK 454
>gi|161508769|ref|YP_001574428.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|160367578|gb|ABX28549.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
Length = 476
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 258/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 10 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 70 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 122 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 181
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 182 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 241
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 242 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 293
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 294 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 353
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 354 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 413
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 414 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 473
Query: 452 QRM 454
+R
Sbjct: 474 KRG 476
>gi|294671003|ref|ZP_06735859.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
gi|291307490|gb|EFE48733.1| hypothetical protein NEIELOOT_02710 [Neisseria elongata subsp.
glycolytica ATCC 29315]
Length = 473
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 187/493 (37%), Positives = 256/493 (51%), Gaps = 58/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MLTIYNTLTRKKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P
Sbjct: 60 -PLTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGKRVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
PHHENEIAQS A W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
I E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345
Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 346 AFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405
Query: 395 EVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 406 LQRDPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN- 464
Query: 447 NPDNGQRMTRWKQ 459
T W++
Sbjct: 465 -----AGGTTWRR 472
>gi|331268391|ref|YP_004394883.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
gi|329124941|gb|AEB74886.1| cysteinyl-tRNA synthetase [Clostridium botulinum BKT015925]
Length = 472
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 164/489 (33%), Positives = 257/489 (52%), Gaps = 53/489 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+K++NT+ R+ EF+ I + MYVCGPTVY++ HIGN R +VFD + R Y
Sbjct: 5 NKMKLFNTMTRQKEEFKPIKDGEVNMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +++N TDIDDK+I++A +E N + + + +++ KD+ L T
Sbjct: 65 --KVNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIEEYYKDSDGLNIKRATVN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT + +++ ++++I G+AY+ + ++ F T YG S + +++ + G R+
Sbjct: 117 PRATEFMDEIVAFVKDLIDKGYAYKVDGDVYFSTKKFTEYGKLSGQNLEDLQAGARITVD 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK P EP WESPWG+GRPGWHIECS M+ LG DIH GG DL+F
Sbjct: 177 ERKQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + + AN W+H+ +LN+ +KMSKS NF T E+LE +
Sbjct: 237 PHHENEIAQSEARNG-KAFANYWMHSAYLNINNKKMSKSLNNFFTTREILER-------Y 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
A VIRL ML HYR P++F+ + L A+ + + +
Sbjct: 289 DAEVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEKMTEDEKE 348
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHI---LG 393
+ + +D NT AI + L +E + N S I LG
Sbjct: 349 YTKVLNSYKEKYIEKMDDDFNTADAIAVIFDLIKEINTHVNADSSKELVNYSLEIIRELG 408
Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ +++ IE L+++R K + ++ AD IR L+++G +LED
Sbjct: 409 MPLGILQKSTMLDLNAEIEGLIEQRQQARKDRNWALADKIRDDLKARGIVLEDT------ 462
Query: 452 QRMTRWKQK 460
+ RWK++
Sbjct: 463 PQGVRWKKE 471
>gi|258422624|ref|ZP_05685530.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|257847196|gb|EEV71204.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9635]
Length = 471
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 258/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMNDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQAYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|113460388|ref|YP_718450.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
gi|123131947|sp|Q0I1Q1|SYC_HAES1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|112822431|gb|ABI24520.1| cysteinyl-tRNA synthetase [Haemophilus somnus 129PT]
Length = 459
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 183/480 (38%), Positives = 254/480 (52%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LRY E
Sbjct: 1 MLKIFNTLTREKEVFKPISENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII R+ + + + + + KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIRRSLEN------RETCEQLVDRMVVEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I GHAY N +++FD S YG SR+ + + + G RV
Sbjct: 113 RATHHIAEIIALVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLTQLQAGARVEIS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ +LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWNSPWGAGRPGWHIECSAMNCKHLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGN-RYVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A L + +
Sbjct: 285 DAESVRYFLLTAHYRSQLNYSEENLDLAHGALERLYTALRGTDKSAVAFGGENFIAQFTE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +AI L ++ARE + + L A ILG+
Sbjct: 345 AMNDDFNTPNAISVLFEMAREINRLKNEDKLLADGLAARLRELAGILGLLEQDPEDFLQA 404
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+++R + K ++ AD R +L + G ILED N T W++
Sbjct: 405 GSDDAEIAKIEALIKQRNDARQAKDWARADAARNELTTMGVILEDGSN------GTMWRK 458
>gi|258452738|ref|ZP_05700736.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|282924443|ref|ZP_06332115.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|257859611|gb|EEV82461.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|282592854|gb|EFB97858.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9765]
Length = 471
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 258/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|15926207|ref|NP_373740.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|148266989|ref|YP_001245932.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150393036|ref|YP_001315711.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156978858|ref|YP_001441117.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|253315639|ref|ZP_04838852.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|255005323|ref|ZP_05143924.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|269202152|ref|YP_003281421.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|295406906|ref|ZP_06816709.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|296275775|ref|ZP_06858282.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
gi|297246270|ref|ZP_06930119.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|21264022|sp|Q99W73|SYC_STAAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56749452|sp|Q932G0|SYC_STAAM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|171769940|sp|A7WYU7|SYC_STAA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189082076|sp|A6TZ06|SYC_STAA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189082077|sp|A5IQ83|SYC_STAA9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|13700420|dbj|BAB41718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|46395518|dbj|BAB56692.2| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
gi|147740058|gb|ABQ48356.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149945488|gb|ABR51424.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|156720993|dbj|BAF77410.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|262074442|gb|ACY10415.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|285816229|gb|ADC36716.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|294968137|gb|EFG44163.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297176868|gb|EFH36126.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|312829025|emb|CBX33867.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ECT-R 2]
gi|315128822|gb|EFT84821.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329727911|gb|EGG64360.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
Length = 466
Score = 397 bits (1019), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWNSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|261378624|ref|ZP_05983197.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
gi|269144957|gb|EEZ71375.1| cysteine--tRNA ligase [Neisseria cinerea ATCC 14685]
Length = 473
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 185/493 (37%), Positives = 255/493 (51%), Gaps = 58/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MLNIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P
Sbjct: 60 -PLTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 113 KATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL F
Sbjct: 173 GFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGNFIT 287
PHHENEIAQS A W+HNGF+ ++G KMSKS GNF T
Sbjct: 233 PHHENEIAQSVGASGHSCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFT 292
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------- 340
I E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 293 IREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAA 345
Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGI 394
+ +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 346 KFDLFENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGL 405
Query: 395 EVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 406 LQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN- 464
Query: 447 NPDNGQRMTRWKQ 459
T W++
Sbjct: 465 -----AGGTTWRR 472
>gi|18311409|ref|NP_563343.1| cysteinyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|168214716|ref|ZP_02640341.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|168217920|ref|ZP_02643545.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182626995|ref|ZP_02954725.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|21264002|sp|Q8XHQ5|SYC_CLOPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|18146093|dbj|BAB82133.1| cysteine-tRNA ligase [Clostridium perfringens str. 13]
gi|170713805|gb|EDT25987.1| cysteinyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|177907665|gb|EDT70289.1| cysteinyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|182380037|gb|EDT77516.1| cysteinyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 466
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 170/488 (34%), Positives = 244/488 (50%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL +K EF + P ++MYVCGPTVY+F HIGN R IVFD + R Y
Sbjct: 1 MIKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDK+I++A +E ++ I +++ +D L T P
Sbjct: 60 -KVDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 RATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF +WK P EP W SPWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 RKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E A W+H+ F+N+ KMSKS NF T E+LE +
Sbjct: 233 HHENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A VIR ML HYR+ ++F+ L A+ + + + +
Sbjct: 285 ADVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAY 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ + +D NT AI A+ L +++ N L +
Sbjct: 345 LESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LG+ ++ N+ IE L+ +R K + F+ AD IR +L+ +G +LED
Sbjct: 405 PLGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFALADKIRDELKDRGIVLEDT----- 457
Query: 451 GQRMTRWK 458
+ RWK
Sbjct: 458 -PQGVRWK 464
>gi|253732537|ref|ZP_04866702.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|253729466|gb|EES98195.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|329731981|gb|EGG68337.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
Length = 466
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I+ ++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKELVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|197301390|ref|ZP_03166471.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
29176]
gi|197299547|gb|EDY34066.1| hypothetical protein RUMLAC_00121 [Ruminococcus lactaris ATCC
29176]
Length = 468
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 181/485 (37%), Positives = 256/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ ++ EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIYNTMSKRKEEFVPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKNYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII++A +E + I+ + ++ KD + T P
Sbjct: 60 -VNFVSNFTDVDDKIIKKANEEGVTAE------EISKRYIEECKKDMEGMNIQPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I+ +I G+AYE N + + T YG S + +D+ + G R V
Sbjct: 113 ATEEIGGMISMIETLIEKGYAYEKNGTVYYRTRKFAEYGKLSHKNLDDLQSGGRALLVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++ DF+LWK EP W+SPWG GRPGWHIECS MS YLG+ DIH GG DLI
Sbjct: 173 EDEKEDSLDFVLWKPKKEGEPAWKSPWGEGRPGWHIECSEMSKKYLGEQIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ E A W+HNGFLN++ RKMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNRKMSKSLGNFFTVREI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ V+R ML HYR P++F+ + + A+ L + + + +
Sbjct: 285 YDLQVLRFFMLSAHYRSPLNFSAELMEAAKNGLERITTAAENLKFLINNARTEDMSEDER 344
Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +D NT AI A+ +L + D L
Sbjct: 345 KKLAGSIAYVENFEKAMDDDFNTADAISAVFELVKYMNTTTDGASSKEYLQNLFDCLIRL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI V KE ++ ++ IE L++ER K K F+ AD IR +L +KG IL+D +
Sbjct: 405 TDVLGIIVDKE--DEILASDIEALIEERQAARKAKNFARADEIRDELLAKGIILKDTREG 462
Query: 449 DNGQR 453
++
Sbjct: 463 VQWKK 467
>gi|169344133|ref|ZP_02865116.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169297744|gb|EDS79843.1| cysteinyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 466
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 171/488 (35%), Positives = 245/488 (50%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL +K EF + P ++MYVCGPTVY+F HIGN R IVFD + R Y
Sbjct: 1 MIKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDK+I++A +E ++ I +++ +D L T P
Sbjct: 60 -KVDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 RATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF +WK P EP W SPWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 RKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E A W+H+ F+N+ KMSKS NF T E+LE +
Sbjct: 233 HHENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A VIR ML HYR+ ++F+ L A+ + + + +
Sbjct: 285 ADVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAY 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ + +D NT AI A+ L +++ N L +
Sbjct: 345 LESLNQYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LG+ ++ N++ IE L+ +R K + F+ AD IR +L+ +G ILED
Sbjct: 405 PLGM--FQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILEDT----- 457
Query: 451 GQRMTRWK 458
+ RWK
Sbjct: 458 -PQGVRWK 464
>gi|255067745|ref|ZP_05319600.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
gi|255047956|gb|EET43420.1| cysteine--tRNA ligase [Neisseria sicca ATCC 29256]
Length = 483
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 186/494 (37%), Positives = 257/494 (52%), Gaps = 58/494 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K + +YNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R L
Sbjct: 10 KMLNLYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLCECGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +
Sbjct: 70 --PLTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIE 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 122 PKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEV 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL
Sbjct: 182 DGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQ 241
Query: 242 FPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFI 286
FPHHENEIAQS A W+HNGF+ ++G KMSKS GNF
Sbjct: 242 FPHHENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFF 301
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 302 TIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPA 354
Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG 393
S + +A+ +D TV A+ L +LA E K +D L A I+G
Sbjct: 355 AEFELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAYLAGCLKALGGIIG 414
Query: 394 IEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + + IE L+ +R K ++ +D IR L ILED
Sbjct: 415 LLQRDPTEFLQGGAVSDGLSNEEIEDLIAQRKQARSDKNWAESDRIRDLLNEHKIILEDN 474
Query: 446 KNPDNGQRMTRWKQ 459
T W++
Sbjct: 475 ------AGGTTWRR 482
>gi|295108532|emb|CBL22485.1| cysteinyl-tRNA synthetase [Ruminococcus obeum A2-162]
Length = 469
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 174/486 (35%), Positives = 247/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ R+ EF ++ +RMYVCGPTVY+ HIGNARPMI+FD + R L Y E
Sbjct: 1 MKLFNTMSRRKEEFVPLEEGKVRMYVCGPTVYNLIHIGNARPMIIFDTVRRYLEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVSSE------EISQRYIAECKKDMAGMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RVP 180
AT I MI +IQ +I G+AY A+ + F YG S + +D+ + G +V
Sbjct: 113 ATQEIDGMIDMIQTLIDKGYAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRSLQVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP W+SPW GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEDQKEDPLDFVLWKPKKEGEPFWKSPWCDGRPGWHIECSVMSKKYLGEEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS C + + A W+HN FLN++ RKMSKS GNF T+ ++ G
Sbjct: 233 VFPHHENEIAQSECCNGV-PFAKYWMHNAFLNIDNRKMSKSLGNFRTVRQI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------- 337
+ V+R ML HYR P++F+ + ++ L +
Sbjct: 285 QYDLQVLRFFMLNAHYRSPLNFSADLMESSKNALERITDAAARLRDRQAAASVQEASEDE 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNA 387
+ + A+ +D NT A+ A+ +L + N L +
Sbjct: 345 KKMMQEEAAFVTKFEEAMDDDFNTADALAAVFELVKFGNTNVQEGSSAEFAAHTLEVMTK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ + K+ + + IE L+ ER K K F+ AD IR L KG L+D +
Sbjct: 405 LCDVLGLILDKKE--EILDEEIENLIAERQAARKAKDFARADEIRGLLLDKGIELKDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|254492695|ref|ZP_05105866.1| cysteinyl-tRNA synthetase [Methylophaga thiooxidans DMS010]
gi|224462216|gb|EEF78494.1| cysteinyl-tRNA synthetase [Methylophaga thiooxydans DMS010]
Length = 463
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 176/484 (36%), Positives = 258/484 (53%), Gaps = 50/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+N+L R+ F+ I + MYVCG TVYD H+G+AR M+VFDV+ R LR
Sbjct: 1 MLKIHNSLSRQKETFKPITAGKVNMYVCGMTVYDLCHVGHARVMVVFDVVTRYLRALGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + + I +T + + +D L L P +P
Sbjct: 60 -NVTYVRNITDIDDKIIKRAAENG------ETIQALTERFIAEMHQDADALGVLRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT +P+++ +++ +I G AY+ N ++ +D S YG S R++D+ + G R+
Sbjct: 113 KATESMPEILAMVETLIGKGLAYKADNGDVYYDVSKFEAYGKLSGRQVDDLRAGERIAVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + EP WESPWG GRPGWHIECSAMS+H LG+ FDIHGGG DL F
Sbjct: 173 EAKTDPLDFVLWKAAKEGEPAWESPWGMGRPGWHIECSAMSAHCLGEHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEGAHDCQS-VNYWMHNGFVRIDDEKMSKSLGNFFTVREVLA-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
PA +R +L +HYR P+++ +L +A+ L+++ +
Sbjct: 285 PAEAVRYFILSSHYRSPLNYAEDQLEQAKAALTRFYTSLRDVEPQPELNWQDDKEFGSRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH-- 400
A+ +D NT A+ + + + K + L + + +LG+
Sbjct: 345 AEAMDDDFNTALALSVMADVRQALNKALENNEADLAAYLAGLLLSFGDVLGLFQQDAETF 404
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ + AI+ L+ ER K +S AD IR QL G ++ED T
Sbjct: 405 LVGDMAEDSDADAIDALIVERNQARADKNWSRADDIRDQLSEMGIVIED------AAGKT 458
Query: 456 RWKQ 459
W++
Sbjct: 459 SWRR 462
>gi|57651406|ref|YP_185462.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87160084|ref|YP_493218.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|88194292|ref|YP_499084.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220704|ref|YP_001331526.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|262049572|ref|ZP_06022441.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
gi|262052418|ref|ZP_06024618.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|284023539|ref|ZP_06377937.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
gi|294850305|ref|ZP_06791039.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|61216110|sp|Q5HIE5|SYC_STAAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109894946|sp|Q2FJB0|SYC_STAA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123291881|sp|Q2G2M6|SYC_STAA8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|172048774|sp|A6QEI2|SYC_STAAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187631648|sp|A8YZM7|SYC_STAAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|57285592|gb|AAW37686.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87126058|gb|ABD20572.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|87201850|gb|ABD29660.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|150373504|dbj|BAF66764.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|259159664|gb|EEW44708.1| cysteinyl-tRNA synthetase [Staphylococcus aureus 930918-3]
gi|259162312|gb|EEW46885.1| cysteinyl-tRNA synthetase [Staphylococcus aureus D30]
gi|294822817|gb|EFG39252.1| cysteinyl-tRNA synthetase [Staphylococcus aureus A9754]
gi|302332243|gb|ADL22436.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
JKD6159]
gi|315196659|gb|EFU27006.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320141606|gb|EFW33445.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|320141766|gb|EFW33594.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA177]
gi|329731047|gb|EGG67420.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
Length = 466
Score = 396 bits (1018), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|300857267|ref|YP_003782251.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300437382|gb|ADK17149.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 174/488 (35%), Positives = 252/488 (51%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NT+ R+ EF +D ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKIFNTMTREKEEFVPLDSDEVKMYVCGPTVYNFFHIGNARTFVVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I++A+ EH ++ + K +++ KD L T PR
Sbjct: 59 KVRFVQNFTDIDDKMIKKAQDEHITV------KELGDKFIKEYYKDADALHIKRATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I ++I I ++I +AYE + ++ F T NYG S + ID+ + G R+
Sbjct: 113 ATLYITKIIEFIGDLIDRDYAYEIDGDVYFSTKKFSNYGKLSGQNIDDLRAGARIDVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ LG+ DIH GG DL+FPH
Sbjct: 173 KKDPMDFAVWKGQKPGEPAWESPWGMGRPGWHIECSCMAHDLLGETIDIHAGGSDLMFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + A W+H+ F+N+ +KMSKS NF T+ E+LE +
Sbjct: 233 HENEIAQSEGRTG-KTFARYWMHSAFVNVNNQKMSKSLNNFFTVREILE-------KYEP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------------TS 341
VIR+ ML HYR I+F+++ L + L +
Sbjct: 285 DVIRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSITNLENLLDNKEDIPISENEKEYR 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
G + + +D NT AI + L ++ + D L +
Sbjct: 345 NKLGKYKQRYIEKMDDDFNTADAISVIFDLVKDINVSINKDSSVEVIRDSLNLIRELGAP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI ++ +I IE L+++R I K ++ +D IR L+++G +LED
Sbjct: 405 LGIL--QQSKRGSIEKEIEALIEKRQIARSEKNWALSDKIRDDLKAQGIVLEDT------ 456
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 457 PEGVRWKR 464
>gi|218767348|ref|YP_002341860.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
gi|34222758|sp|Q9JWJ3|SYC_NEIMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|121051356|emb|CAM07647.1| cysteinyl-tRNA synthetase [Neisseria meningitidis Z2491]
Length = 699
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 573
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 574 DLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 633
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 634 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|322381145|ref|ZP_08055148.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321154721|gb|EFX46992.1| cysteinyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 461
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 171/484 (35%), Positives = 250/484 (51%), Gaps = 55/484 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
+NT+ R+ EF+ + P + MYVCGPTVY++ HIGN RP I FDV++R L Y + VT
Sbjct: 2 FNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGYD--VT 59
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YV N TD+DDK+I +A + + + + + + +++D L PR T
Sbjct: 60 YVVNFTDVDDKLIRKAEETG------ETVKELADRFIEAYLEDMEALGIRKADINPRVTE 113
Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
++ ++I I++++ G+AYE ++ + T +YG S + +DE + G R+ K+N
Sbjct: 114 NMDEIISFIRSLVDKGYAYENGGDVFYRTQKFADYGKLSHQNLDELQYGIRIEVDERKEN 173
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF+LWK + P E W SPWG GRPGWHIECSA+ YLG+ DIHGGG+DL FPHHE
Sbjct: 174 PQDFVLWKAAKPGEVYWSSPWGNGRPGWHIECSALVHKYLGETIDIHGGGVDLTFPHHEC 233
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQ+ + A W+HN FLN++ KMSKS GN + + E+L + V+
Sbjct: 234 EIAQTEALT-CKPMAKYWLHNAFLNIDNEKMSKSLGNGVLVREIL-------KRVKPQVL 285
Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------------II 347
RL M+M HYR I+F L +A L + + T+ I
Sbjct: 286 RLFMMMAHYRNQINFNSDGLEQAANGLERIMNSVTNLKHRLKIAQEGPADEQVKNRIQAI 345
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
+ + +D NT AI A+ +L E+ LL F + +LGI
Sbjct: 346 KAQFEAKMNDDFNTPDAITAVFELVSEANNTLKEERVNVSTLEMLLDQFKSFDTVLGIL- 404
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + IEKL+ ER + K ++ AD IR L KG +LED + R
Sbjct: 405 -EPEETDLMDEEIEKLIAERTEARRAKNWARADEIRDILTEKGILLEDT------PQGIR 457
Query: 457 WKQK 460
W+QK
Sbjct: 458 WRQK 461
>gi|30260280|ref|NP_842657.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47525344|ref|YP_016693.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183123|ref|YP_026375.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49481691|ref|YP_034442.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|52145127|ref|YP_081701.1| cysteinyl-tRNA synthetase [Bacillus cereus E33L]
gi|65317550|ref|ZP_00390509.1| COG0215: Cysteinyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165873141|ref|ZP_02217757.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167635089|ref|ZP_02393406.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641949|ref|ZP_02400184.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170689572|ref|ZP_02880758.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707565|ref|ZP_02898018.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655593|ref|ZP_02936974.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196041797|ref|ZP_03109087.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218901292|ref|YP_002449126.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227812763|ref|YP_002812772.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|229601947|ref|YP_002864741.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|254684407|ref|ZP_05148267.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254733756|ref|ZP_05191471.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254756312|ref|ZP_05208341.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254758390|ref|ZP_05210417.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|300119599|ref|ZP_07057143.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
gi|33301677|sp|Q81VV1|SYC_BACAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216160|sp|Q63HB0|SYC_BACCZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216199|sp|Q6HPS8|SYC_BACHK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735045|sp|B7JK97|SYC_BACC0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765175|sp|C3P9N5|SYC_BACAA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765176|sp|C3LJ62|SYC_BACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|30253601|gb|AAP24143.1| cysteine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47500492|gb|AAT29168.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49177050|gb|AAT52426.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|49333247|gb|AAT63893.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|51978596|gb|AAU20146.1| cysteine--tRNA ligase (cysteinyl-tRNA synthetase) [Bacillus cereus
E33L]
gi|164711121|gb|EDR16682.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167510080|gb|EDR85491.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529563|gb|EDR92313.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127561|gb|EDS96435.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170666485|gb|EDT17262.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080057|gb|EDT65155.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|196027417|gb|EDX66034.1| cysteine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|218537598|gb|ACK89996.1| cysteinyl-tRNA synthetase [Bacillus cereus AH820]
gi|227004950|gb|ACP14693.1| cysteine--tRNA ligase [Bacillus anthracis str. CDC 684]
gi|229266355|gb|ACQ47992.1| cysteine--tRNA ligase [Bacillus anthracis str. A0248]
gi|298723071|gb|EFI63969.1| cysteinyl-tRNA synthetase [Bacillus cereus SJ1]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|190568970|ref|ZP_03021871.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
gi|190559894|gb|EDV13878.1| cysteinyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 254/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I ++ + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IANRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|163793631|ref|ZP_02187606.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
gi|159181433|gb|EDP65948.1| cysteinyl-tRNA synthetase [alpha proteobacterium BAL199]
Length = 463
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 215/479 (44%), Positives = 283/479 (59%), Gaps = 42/479 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++KI NTL R F+ IDPS++RMYVCGPTVYDFAH+GNARP++VFDVL RLLR Y
Sbjct: 4 QPELKITNTLTRAKEAFRPIDPSHVRMYVCGPTVYDFAHVGNARPVVVFDVLVRLLRRLY 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRNITD++DKI RA++ + I +T++ Q+ D L P
Sbjct: 64 --PRVTYVRNITDVEDKINARAKENG------EPIEALTARTAAQYQADMDALGAERPDV 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPRAT+HI QMI LI+ +I GHAY A+ ++F S+P+YG SRR D+ G RV
Sbjct: 116 QPRATHHIAQMITLIERLIAKGHAYAADGHVLFAVPSMPDYGGLSRRDRDDMIAGARVEV 175
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K++PADF+LWK S+ PGW+SPWGRGRPGWHIECSAMS +LG+ FDIHGGGLDLI
Sbjct: 176 APYKQDPADFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMSWEHLGETFDIHGGGLDLI 235
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA AN W+HNGF+ +EG KMSKS GNF T++++L +
Sbjct: 236 FPHHENEIAQSRCAFGTHTMANYWMHNGFVTVEGEKMSKSLGNFYTVHDVL-------KE 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLS 353
WP IRL +L +HYR P+DFT L EA+ L + Q + + +++
Sbjct: 289 WPGEAIRLLLLSSHYRAPLDFTSAGLKEAKAQLDRLYQALRNAADVAVEPEAPAGDELMA 348
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHL------ 401
AL +DLN A+ LH+ K D +LG+
Sbjct: 349 ALLDDLNVPLAVARLHEAVGRLNKATDPAERSAAKSALLGGGALLGLLQADPEAWFQGGG 408
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+Q R+ K + F+ AD IR L++ G LED G + T WK+
Sbjct: 409 DDDLDPAEIERLIQARVDARKGRDFAEADRIRDALKANGVELED------GPQGTTWKR 461
>gi|192361138|ref|YP_001982161.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
gi|190687303|gb|ACE84981.1| cysteinyl-tRNA synthetase [Cellvibrio japonicus Ueda107]
Length = 466
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 179/487 (36%), Positives = 266/487 (54%), Gaps = 50/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R+ EF+ + P I MYVCG TVYD+ HIG+AR ++ FDV+ + LR
Sbjct: 1 MALQIYNTLSRQKEEFKPLKPGKISMYVCGITVYDYCHIGHARVLVAFDVITKFLRSQGW 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII+RA + + + +T + +D RL P +
Sbjct: 61 D--VTYVRNITDIDDKIIKRANENG------EQYTDLTKRFIDYMHEDEARLGIARPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT I Q+I + Q +I G+AY +N ++ + + +YG + + +DE +G R+
Sbjct: 113 PRATAFIDQIINMNQALIDKGYAYPASNGDVYYRVTRFADYGKLTNKNVDELLVGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + EP W+SPWG+GRPGWHIECSAMS G FDIHGGG DL
Sbjct: 173 DEIKEDPRDFVLWKAAKAGEPAWKSPWGQGRPGWHIECSAMSKDCCGTTFDIHGGGPDLP 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ + N W+H G + ++G KMSKS GNF TI ++LE
Sbjct: 233 FPHHENEIAQSEAANGCK-YVNYWMHAGAVRVDGEKMSKSLGNFFTIRDVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
+ V+R ++ +HYR PI++ L EA L ++ ++
Sbjct: 285 YHPEVVRFLLVSSHYRSPINYAEDNLVEARTGLERFYGALRDYADVESLPLTELQASDYY 344
Query: 350 -AVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH 400
+ ++A+ +D NT A+ +++ L RE + L A ILGI
Sbjct: 345 RSFVAAMNDDFNTRVALASMYDLVRELNNAGKTDVERAQRLAGELKALGLILGILQENPR 404
Query: 401 L-------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + + +++LV ER+ K K ++ AD +RKQL G ++ED K+
Sbjct: 405 VFLQTGTSGQIAAEEVDRLVAERIQAKKEKNYARADEVRKQLADNGILIEDAKDGT---- 460
Query: 454 MTRWKQK 460
T+W+++
Sbjct: 461 -TQWRRE 466
>gi|298369710|ref|ZP_06981027.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
gi|298282267|gb|EFI23755.1| cysteine--tRNA ligase [Neisseria sp. oral taxon 014 str. F0314]
Length = 473
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 186/491 (37%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAVAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 ELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAVSDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|325143495|gb|EGC65816.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240013]
Length = 473
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|42779170|ref|NP_976417.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|61216251|sp|Q73FB7|SYC_BACC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|42735085|gb|AAS39025.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10987]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|254671629|emb|CBA09335.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha153]
Length = 473
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 189/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWGRGRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 347
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K N L A I+G+
Sbjct: 348 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGVASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|21282214|ref|NP_645302.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49485394|ref|YP_042615.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297208757|ref|ZP_06925185.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300912847|ref|ZP_07130289.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|24418688|sp|Q8NXY7|SYC_STAAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56749395|sp|Q6GBV8|SYC_STAAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21203650|dbj|BAB94350.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49243837|emb|CAG42262.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|296886702|gb|EFH25607.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300885951|gb|EFK81154.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
Length = 466
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDRGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|283769685|ref|ZP_06342577.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
gi|283459832|gb|EFC06922.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
Length = 471
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 258/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMEDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGILSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|82750237|ref|YP_415978.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|109894947|sp|Q2YSD1|SYC_STAAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|82655768|emb|CAI80168.1| cysteinyl-tRNA synthetase [Staphylococcus aureus RF122]
Length = 466
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N + I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A +N W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFSNYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|323490593|ref|ZP_08095798.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323395685|gb|EGA88526.1| cysteinyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 467
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 172/489 (35%), Positives = 257/489 (52%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+N+L R+ EF ++ ++MYVCGPTVY++ HIGNARP+IV+D + R L+Y
Sbjct: 1 MSIQIFNSLSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPVIVYDTVRRHLQYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + ++T L C
Sbjct: 61 D--VKYVSNFTDVDDKLIKAANELGQEVP------EIAERFIAAYFENTKALGCAEADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T+H+ Q+I I +I G+AYE+ ++ + T YG S + +DE K+G RV
Sbjct: 113 PLVTDHMAQIIEFIVALIEKGYAYESQGDVYYRTRKFDGYGKLSHQSVDELKIGARVETG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF+LWK + P E W+SPWG+GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 173 DKKEDELDFVLWKAAKPKEISWDSPWGKGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A+ W+HNG++N++ KMSKS NF+ +N++L +
Sbjct: 233 PHHENEIAQSEAFTG-KPFAHYWMHNGYINIDNEKMSKSLNNFVLVNDIL-------KEL 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------- 341
V+R ML HYR PI+++ Q + +A L +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSQQLVEDAVAGLERLRTAYANLKHRLSASADLGDHSDTWV 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I A + + +D NT +AI +L L+R S + +F+ A
Sbjct: 345 HKIEEIKTAFIETMDDDFNTANAISSLFDLSRLSNTYLLEKQTATSVLETFIAVFDELAG 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ ++ + + +E L+ ER+ K + F+ AD IR + K ILED
Sbjct: 405 ILGLPFNQQE--ELLDEEVEALMAERIEARKNRDFARADEIRDLFKEKNIILEDT----- 457
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 458 -AQGTRWKR 465
>gi|196047745|ref|ZP_03114944.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862142|ref|YP_002747520.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|254765177|sp|C1ET19|SYC_BACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|196021423|gb|EDX60131.1| cysteinyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788057|gb|ACO28274.1| cysteine--tRNA ligase [Bacillus cereus 03BB102]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|254724230|ref|ZP_05186015.1| cysteinyl-tRNA synthetase [Bacillus anthracis str. A1055]
Length = 465
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSIGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|168206821|ref|ZP_02632826.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170661739|gb|EDT14422.1| cysteinyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 466
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 171/488 (35%), Positives = 245/488 (50%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL +K EF + P ++MYVCGPTVY+F HIGN R IVFD + R Y
Sbjct: 1 MIKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDK+I++A +E ++ I +++ +D L T P
Sbjct: 60 -KVDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 RATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFQGYGKLSGQNIEDLQSGARISVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF +WK P EP W SPWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 RKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E A W+H+ F+N+ KMSKS NF T E+LE +
Sbjct: 233 HHENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A VIR ML HYR+ ++F+ L A+ + + + +
Sbjct: 285 ADVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAY 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ + +D NT AI A+ L +++ N L +
Sbjct: 345 LESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LG+ ++ N++ IE L+ +R K + F+ AD IR +L+ +G ILED
Sbjct: 405 PLGM--FQKSTKGNLAEEIEALIAKRQQARKDRDFALADKIRDELKDRGIILEDT----- 457
Query: 451 GQRMTRWK 458
+ RWK
Sbjct: 458 -PQGVRWK 464
>gi|289523037|ref|ZP_06439891.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503580|gb|EFD24744.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 475
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 184/495 (37%), Positives = 251/495 (50%), Gaps = 59/495 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN L R+ EF + P I YVCGPTVYD+ HIGNARP +VFD L R + Y
Sbjct: 1 MGLVLYNDLTRRKEEFAPVSPGRIGFYVCGPTVYDYIHIGNARPFVVFDALRRYMEYKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N TDIDDK+I +A Q ++ + + + + +D L T
Sbjct: 61 E--VIYVQNFTDIDDKMINKANQLGITV------KELAEQFIEAYFEDIIPLGVRQATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +I LI II +GHAY + + FD S PNYG S + ++E + G R+
Sbjct: 113 PKATEHIDDIIRLISRIIENGHAYIIDGNVYFDVKSYPNYGKLSGQSLEELQAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK EP W+SPWG GRPGWHIECSAM+ YLG DIHGGG DLIF
Sbjct: 173 ERKRHPLDFVLWKAKKEGEPWWDSPWGHGRPGWHIECSAMAMKYLGDTIDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A ++ WIHNG+L + KMSKS GN + + E+ +++
Sbjct: 233 PHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILNVREI-------RKNF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------------TSKG 345
+RL +L HYR P+DF+ L +A L + T
Sbjct: 285 QPLAVRLFILAAHYRSPLDFSDDSLIQATKSLQRLRNCYSDLLFYMERSQEKNTPDTWLE 344
Query: 346 IIDPAVLSAL----YNDLNTVSAIQALHKLAREST---------------KNHDLLPIFN 386
+ +D NT A+ A+ ++ R+ K+ D
Sbjct: 345 DVVNNGYKRFCNALDDDFNTAGALGAVFEVVRDLNNYLKENETLDKQALIKSKDFFETVE 404
Query: 387 ASAHILGIE-VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++GI + +E S IE L++ER K + F+ AD IR +L SKG ILED
Sbjct: 405 NILGVIGINTIGEEFAGTLSSSEIEGLIKEREAARKKRDFARADAIRNELASKGIILEDT 464
Query: 446 KNPDNGQRMTRWKQK 460
TRWK+K
Sbjct: 465 ------PLGTRWKKK 473
>gi|269940102|emb|CBI48478.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TW20]
Length = 466
Score = 396 bits (1017), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N+ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIGNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|182420105|ref|ZP_02951339.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237666779|ref|ZP_04526764.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
gi|182376142|gb|EDT73729.1| cysteinyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237657978|gb|EEP55533.1| cysteine--tRNA ligase [Clostridium butyricum E4 str. BoNT E BL5262]
Length = 466
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 166/488 (34%), Positives = 249/488 (51%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L R+ EF I P ++MYVCGPTVY++ HIGN R I+FD + R L Y
Sbjct: 1 MRLYNSLTRQKEEFVPIVPGEVKMYVCGPTVYNYFHIGNGRTFIIFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+++N TDIDDK+I +A E ++ + K ++ +D L T PR
Sbjct: 59 KVTFIQNFTDIDDKMINKANAEGITV------KELGDKFIDEYYQDADGLQVKRATINPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +++ ++++I G AYE + ++ F T YG + +++ + G R+
Sbjct: 113 ATEYIDEVVEFVKDLIDRGFAYEIDGDVYFSTKKFEEYGKLCGQNLEDLQSGARISVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ LG DIHGGG+DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWESPWGLGRPGWHIECSCMAKKLLGDTIDIHGGGMDLKFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS +K AN W+H F+N++ +KMSKS NF+T E L + + +
Sbjct: 233 HENEIAQSEAVTG-QKFANYWMHAAFVNVDNKKMSKSENNFVTAREAL-------KKYNS 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
VIR ML HYR I+F+ + L A+ + + + +
Sbjct: 285 DVIRFLMLSGHYRTQINFSAELLDSAKSSVERLYNCVNNLENLINEVNRKEANDSEKAYL 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT I + L ++ N + L +
Sbjct: 345 KSLDKHREKFIEKMDDDFNTADGISVIFDLIKDINNNVSIDSSSELCEGTLNLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI E K++ + I++L+ +R K + F+ AD IR L+++ ILED
Sbjct: 405 LGILQKTEE--KSLEVEIQELIDKRQEARKNRDFALADKIRDDLKARNIILEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 PQGVRWKK 464
>gi|241758928|ref|ZP_04757040.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
gi|241320749|gb|EER56982.1| cysteine--tRNA ligase [Neisseria flavescens SK114]
Length = 477
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 188/494 (38%), Positives = 258/494 (52%), Gaps = 59/494 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F I+P N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFTPINPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY A N+++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAVNDDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ-KP 461
T W++ KP
Sbjct: 465 ---AGGTTWRRGKP 475
>gi|304413758|ref|ZP_07395202.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
gi|304283849|gb|EFL92243.1| Cysteinyl-tRNA synthetase [Candidatus Regiella insecticola LSR1]
Length = 506
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 183/487 (37%), Positives = 255/487 (52%), Gaps = 52/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ ID I MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 42 MLKIFNTLSRQKEIFRPIDAGKIGMYVCGITVYDLCHIGHGRTFVAFDVIVRYLRYLDYD 101
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII+RA + N+ +T + + +D L L P +P
Sbjct: 102 L--TYVRNITDIDDKIIKRAAEN------NETCQQLTERMMIEMYRDFDALNILRPNEEP 153
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT HI ++I LI+ +I HAY A+ +++F S PNYG SR+ ++ + G RV
Sbjct: 154 QATAHITEIIALIKKLIEGKHAYIAADGDVVFAVKSAPNYGLLSRQNLENLQAGARVAIA 213
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWKR+ P +P W+SPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+F
Sbjct: 214 DGKEDPMDFVLWKRALPGDPSWDSPWGAGRPGWHIECSAMNAKQLGRHFDIHGGGSDLLF 273
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H G + +E KMSKS NF TI +LL+ +
Sbjct: 274 PHHENEIAQSTCAHG-DPYVNYWMHTGMVMVEKNKMSKSLNNFFTIRDLLD-------HY 325
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAVL 352
A +R ++ HYR +D++ + L ++ I L + +
Sbjct: 326 DAETVRYFLMSAHYRSQLDYSEENLRQSRIALERLYIALRGTDETASAAAAGENFEKRFR 385
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D NT A L +ARE + L + A +LG+ K
Sbjct: 386 DAMDDDFNTPEACAVLFDIAREVNRLKTEDNAAASGLAATLRSMAQVLGLLTQKPEHFLQ 445
Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R + K + AD R QL LED G +
Sbjct: 446 AVNHSEIAKDTEIAKIEALIEQRNTARQQKNWVLADEARHQLNEMKITLED------GPQ 499
Query: 454 MTRWKQK 460
T W++K
Sbjct: 500 GTTWRRK 506
>gi|253731134|ref|ZP_04865299.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253725099|gb|EES93828.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 466
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKIANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|312621501|ref|YP_004023114.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312201968|gb|ADQ45295.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 465
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 247/479 (51%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL EF+ ++ ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLTMTKEEFEPLEEGKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD++DK+I RA +E ++ + + Q++ KD RL T PR
Sbjct: 60 -VIYIQNFTDVEDKMINRANKEGVTVF------ELAERFIQEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIEDMIALIQTLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELMAGARVDPNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWSSPWGEGRPGWHIECSVMAMKYLGQTIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + A W+HNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEASTG-KPFARFWLHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
+RL ML HYR+P++F++ + +AE L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSIDLIEQAESALKRIYTCYENLEYLIKNGTTSNSSDSTLKAV 344
Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + + ILGI
Sbjct: 345 LKELKAKFIDAMEDDLNTAEATGYLFEMVREINTHSNTCSKDVLILARDTLKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
E I I +LV++R K K F AD IR L S G+I+ D +R
Sbjct: 405 LEQYEEKKDEIPPEILELVEKRNEARKAKNFLEADRIRDDLRSLGYIVLDTPQGTKIER 463
>gi|302341971|ref|YP_003806500.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638584|gb|ADK83906.1| cysteinyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 483
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 181/502 (36%), Positives = 242/502 (48%), Gaps = 68/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNT R+ EF ++P +R+YVCG TVYD HIG+AR + FD + R
Sbjct: 1 MPLVVYNTQSRRKEEFIPLEPGVVRVYVCGVTVYDDPHIGHARCYVAFDAMVRHFLAKGW 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRN TDIDDKII RA + + K + F +D L L P+H+
Sbjct: 61 --RVNYVRNFTDIDDKIIRRAAESGLG------WRELADKYIESFRQDMAALDVLPPSHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI +MI IQ ++ GHAY+ +++F S YG SRR +++ + G RV
Sbjct: 113 PRATEHIAEMIATIQTLMAKGHAYQIEGGDVLFAVESFDGYGKLSRRNLEDMQAGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF+LWK S P EP W+SP G GRPGWHIEC+AMS YLG+ FDIHGGG DL+
Sbjct: 173 DPRKKNPMDFVLWKASKPGEPSWDSPLGPGRPGWHIECTAMSGKYLGQTFDIHGGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ A+ W+HNGF+ + KMSKS GNF TI ++L+ +
Sbjct: 233 FPHHENEIAQGEACTG-HPLAHYWLHNGFVRVNHEKMSKSLGNFFTIKDILKITR----- 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+RL +L HYR P+DF+ + EA L + +
Sbjct: 287 --PEALRLFLLSKHYRSPLDFSDAAIKEAGAGLERLYTALQAAQERAAAGPLDAAGQALA 344
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------------LPIFNAS 388
+ + + +D NT AI AL LAR K
Sbjct: 345 AEIQALADEFEAGMDDDFNTARAIGALFGLARLGNKLAAEPDGPAKGPLLELCARRLREL 404
Query: 389 AHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
LG+ + IE L+ +R K K F+ AD IR QL+
Sbjct: 405 GGRLGLLRIDPAEFFRGAAGQTATQGGVGAADIEALIAQRNQARKDKNFAEADRIRDQLK 464
Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
+ G L+D + T W+
Sbjct: 465 AMGVTLQDS------PQGTTWR 480
>gi|118475860|ref|YP_893011.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|187629790|sp|A0R8G1|SYC_BACAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118415085|gb|ABK83504.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 465
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 174/489 (35%), Positives = 252/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIHELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|302872638|ref|YP_003841274.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302575497|gb|ADL43288.1| cysteinyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 465
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 182/479 (37%), Positives = 255/479 (53%), Gaps = 46/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL + EF+ ++ + ++MYVCGPTVYDF HIGNARP+IVFD L R Y E
Sbjct: 1 MKLYNTLSQTKEEFEPLEKNKVKMYVCGPTVYDFIHIGNARPLIVFDTLRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDI+DK+I RA +E ++ + + +++ KD RL T PR
Sbjct: 60 -VIYIQNFTDIEDKMINRANKEGITVF------ELAERFIKEYYKDADRLNVKRATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT IP MI LIQ +I G+AY + ++ F T YG S + I+E G RV
Sbjct: 113 ATEEIPDMIVLIQKLIDKGYAYVVDGDVYFRTRKFAEYGKLSHKNIEELVAGARVDLSEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK EP W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFALWKAKKEGEPAWFSPWGEGRPGWHIECSVMAMKYLGETIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A WIHNG++N+ KMSKS GNF T+ E++E +
Sbjct: 233 HENEIAQSEAATG-KPFARFWIHNGYVNINNEKMSKSLGNFFTVREIIE-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
+RL ML HYR+P++F++ + +AE+ L + +
Sbjct: 285 EALRLFMLQAHYRKPLNFSLDLIEQAEVALKRIYTCYENLEFLIQNETSSSENNDKLKTV 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + A+ +DLNT A L ++ RE + + + ILGI
Sbjct: 345 IEQLKAKFIEAMEDDLNTAEATGYLFEMVREINTHANFCSKETLTFAKDVLKELCSILGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + I +V++R K+K F+ AD IR +L+S G+I+ D +R
Sbjct: 405 LEQYSSKEEYVPQEILDMVEKRNQARKLKNFAEADRIRDELKSLGYIVLDTPQGTKIER 463
>gi|91793850|ref|YP_563501.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
gi|123356646|sp|Q12L98|SYC_SHEDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91715852|gb|ABE55778.1| cysteinyl-tRNA synthetase [Shewanella denitrificans OS217]
Length = 459
Score = 395 bits (1016), Expect = e-108, Method: Composition-based stats.
Identities = 183/481 (38%), Positives = 257/481 (53%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ EF+ I P I MYVCG T+YD HIG+ R + FD++ R LRY E
Sbjct: 1 MLKIYNSMSREKQEFKPITPGKIGMYVCGITIYDLCHIGHGRTFVSFDMIVRYLRYLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + RNITD+DDKII+RA + N++ +T + T + KD L + P +P
Sbjct: 61 --VNFQRNITDVDDKIIKRAAEN------NESCDALTERLTAEMHKDFDALNMVRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT H+P++I ++Q ++ GHAY + +++F +S YG S + ID+ + G RV
Sbjct: 113 KATLHMPEIIEMVQRLLDRGHAYVAPDGDVLFSVASYKEYGRLSGQNIDQLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
++K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ +LG FDIHGGG DL F
Sbjct: 173 HNKQNPMDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNGKHLGTHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L + +
Sbjct: 233 PHHENEIAQSCCAHDT-PYVNYWMHTGMVMVDREKMSKSLGNFFTIRDVL-------KHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
A +R +L HYR ++++ L +A L + S
Sbjct: 285 DAQTVRYFLLSGHYRSQLNYSEDNLKQARSALERLYTAFKDLDLTVTAAPADEYVTKFKS 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT A L + RE + L A +LGI K
Sbjct: 345 AMNDDFNTPEAYSVLFDMVREINRLKTTDMGAASALGVSMKQLADVLGIVSVDIETFFKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD R +L G +LED G+ T WK+
Sbjct: 405 SGSDDEVAEIEALIVERNRARTEKDWAAADVARDRLNQLGVVLED------GENGTTWKK 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|304309880|ref|YP_003809478.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
gi|301795613|emb|CBL43812.1| Cysteinyl-tRNA synthetase [gamma proteobacterium HdN1]
Length = 474
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 198/489 (40%), Positives = 271/489 (55%), Gaps = 52/489 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I ++NTL + F I P + MYVCGPTVY++ HIGNARP++VFD LYRLL+ +Y
Sbjct: 1 MNIYLHNTLSGQKERFVPISPDRVTMYVCGPTVYNYVHIGNARPVVVFDTLYRLLKRHY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITD+DDKI + A + I ++S+ + D L L P +
Sbjct: 60 -PEVRYARNITDVDDKINKAASDN------RETICELSSRYADAYRSDMQALFNLTPQFE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I MI +I +I GHAYEA ++F+ S+ P+YG S+R +D+ G RV
Sbjct: 113 PRATDNIGAMIEIITTLIEKGHAYEAEGHVLFNVSTDPHYGCLSKRNLDDMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNPADF+LWK S+ PGW+SPWGRGRPGWHIEC+AM + +LGK DIH GGLDL+F
Sbjct: 173 PYKKNPADFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMINAHLGKTIDIHAGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ CA + E+ N W+HNG+L ++G KMSKS GNF T++ELL + W
Sbjct: 233 PHHENEIAQGTCAHQDERYVNYWLHNGYLTIDGEKMSKSLGNFATVHELL-------QHW 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
P V+R A+L HYR P+D++ LT+A L + T D
Sbjct: 286 PGEVLRYALLSAHYRSPLDWSDDALTQARASLDRLYGALRGHTPSSCADTHATAPDALQH 345
Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKE 399
L +DL T A+ LH+LA E+ ++ D L + ++ +G+
Sbjct: 346 PLLDTLEQHLADDLATPQALAVLHQLAGEANRSSDTPSRTQLQAVLASAGERMGLLTQDP 405
Query: 400 HL--------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
N AIE L+Q+R K K F+ +D IR L+++G LED
Sbjct: 406 ESWFKWQAPAARDATGNGLDDAAIEDLIQQRRDARKAKNFARSDEIRDLLKAQGIELEDT 465
Query: 446 KNPDNGQRM 454
+ R
Sbjct: 466 REGTRWTRG 474
>gi|325206985|gb|ADZ02438.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M04-240196]
Length = 473
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|160893352|ref|ZP_02074139.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
gi|156865044|gb|EDO58475.1| hypothetical protein CLOL250_00902 [Clostridium sp. L2-50]
Length = 468
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 192/485 (39%), Positives = 253/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R EF I+ + +YVCGPTVYD+ HIGNARPMIVFD L R L Y +
Sbjct: 1 MKIFNTLTRTKEEFVPINEGKVGIYVCGPTVYDYIHIGNARPMIVFDTLRRYLTYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+RA +E +I+ + + KD + T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKRANEEGVDS------KVISERFIAETKKDMAAMNVQEATTHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
AT IP MI +I+ +I GHAYE N + F T S +YG S + ID+ + G R
Sbjct: 113 ATEEIPDMIEMIKTLIEKGHAYEVNGTVYFRTRSFADYGKLSHKNIDDLESGHRAENHQL 172
Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + K++P DF+LWK EP WESPWG GRPGWH+ECS MS Y+G + DIH GG
Sbjct: 173 KVSGQDEKEDPLDFVLWKPKKEGEPFWESPWGEGRPGWHLECSVMSKKYIGDIIDIHAGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENEIAQS A+ E A W+HNGFL + KMSKS GNF T+ E+ +
Sbjct: 233 EDLIFPHHENEIAQSEAANDKE-FARYWMHNGFLKINNEKMSKSLGNFFTVREIAD---- 287
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---- 353
+P VIR ML HYR P++F+ + ++ L + + PA +
Sbjct: 288 ---KYPLQVIRFFMLSAHYRSPLNFSADLVEASKNGLERILTAVDKLKSLAPADVEGSDV 344
Query: 354 ---------------ALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
A+ +DLNT AI + +L + + N +
Sbjct: 345 SVEAELDGYTKRFETAMDDDLNTADAISVIFELVKYTNINISNDTPKKTVDLAIRTIEKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
ILGI +E + + IE L+ ER K K F+ AD IR L KG ILED +
Sbjct: 405 CDILGIITEREE--ELLDSDIEALINERQEARKAKNFARADEIRNMLSDKGIILEDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VKWKR 467
>gi|296131811|ref|YP_003639058.1| cysteinyl-tRNA synthetase [Thermincola sp. JR]
gi|296030389|gb|ADG81157.1| cysteinyl-tRNA synthetase [Thermincola potens JR]
Length = 487
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 182/508 (35%), Positives = 252/508 (49%), Gaps = 71/508 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNT RK EF P + MYVCGPT Y+ H+GNARP+IVFD + R Y
Sbjct: 1 MTIKLYNTCTRKKEEFIPRQPGKVDMYVCGPTTYNLIHLGNARPLIVFDTVRRYFEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TDIDDKII RAR+E N + +K +++ KD L T
Sbjct: 61 Q--VTYVQNFTDIDDKIINRAREE------NTDPITLAAKYIREYFKDAAALGVREATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+ ++I +I+ I+ +G+AY+ + ++ F S YG S R +++ + G RV
Sbjct: 113 PRVSEHLDEIIEMIRGIMKNGYAYQLDGDVYFSVESFKGYGKLSGRSLEDMQAGARVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM++ YLG FDIHGGG DLIF
Sbjct: 173 TRKRHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMANKYLGMGFDIHGGGFDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A W+HNGF+ + KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQAEAYAGCGPFARYWMHNGFITVNEEKMSKSLGNFFTVREILA-------KY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
V+R ML THYR P+DF +L LS+ + I
Sbjct: 286 DPEVVRFYMLSTHYRSPLDFDDTKLEMNRKSLSRLHNALDNIESILKTNKFGEVENPELE 345
Query: 350 ---------------AVLSALYNDLNTVSAIQALHKLAREST------------------ 376
A+ +D NT AI L LAR+S
Sbjct: 346 KALADLLRAREKAVRDFEEAMDDDFNTALAIAVLFDLARDSNAFIHAATSAGGDALLQEV 405
Query: 377 --KNHDLLPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ F +LG+ + + + ++ ++ R K +++AD IR
Sbjct: 406 KGALQQVFDTFMKLGQVLGLFEKRGTQGDTGLVDRLMQIILDIRSEARARKDWATADGIR 465
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
+L G I+ED + RWK+K
Sbjct: 466 NKLNELGIIIEDS------PQGARWKRK 487
>gi|28212192|ref|NP_783136.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
gi|61216342|sp|Q890M4|SYC_CLOTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|28204636|gb|AAO37073.1| cysteinyl-tRNA synthetase [Clostridium tetani E88]
Length = 465
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 168/486 (34%), Positives = 247/486 (50%), Gaps = 53/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ EF + + MYVCGPTVY+F HIGN R IVFD + R L Y
Sbjct: 1 MKLYNTLTRQKEEFIPLKTGEVNMYVCGPTVYNFFHIGNGRTFIVFDTVRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I+RA E ++ + + ++ KD L T PR
Sbjct: 59 KVKFVQNFTDIDDKMIKRANDEGITV------KELGERFIGEYYKDADSLNIERATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 ATEFMEEIIQFVKELVDKGYAYEIDGDVYFHTKRFNEYGKLSGQNIEDLQAGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+ DF +WK+ P EP WESPWG GRPGWHIECS M+ + LG DIH GG DLIFPH
Sbjct: 173 KKDAMDFAIWKKQKPGEPAWESPWGMGRPGWHIECSCMAHNLLGDTIDIHAGGHDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C + A W+H+ FLN++ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSECRTG-KPFAKYWMHSAFLNIDNKKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
V+RL ML HYR ++F+ + L A + + +
Sbjct: 285 DVVRLFMLSAHYRAQLNFSEELLQSAMSAVERLYNAIYNLENLANEVKRNDLNEEEKKYI 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHI---LG-- 393
+ + +D NT AI + + R+ K+ I + I LG
Sbjct: 345 KKLDEYREKYIEKMDDDFNTADAIAVIFDMIRDINSNVKSDSSKKIIEYALSIIRELGSP 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++ +++ I++L+ R K ++ AD IR L+ +G +LED +
Sbjct: 405 LGILQKSTEESVEDEIQQLIDRREKARTEKNWALADEIRDGLKERGILLEDT------PQ 458
Query: 454 MTRWKQ 459
RWK+
Sbjct: 459 GVRWKR 464
>gi|261400776|ref|ZP_05986901.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
gi|269209376|gb|EEZ75831.1| cysteine--tRNA ligase [Neisseria lactamica ATCC 23970]
Length = 473
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/489 (38%), Positives = 255/489 (52%), Gaps = 58/489 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
YNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR +T
Sbjct: 5 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PLT 62
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YVRNITDIDDKII RA + + I +T++ Q +D L L P +P+AT
Sbjct: 63 YVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKATE 116
Query: 128 HIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV K+
Sbjct: 117 NIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKR 176
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+P DF+LWK + EP WESPWGRGRPGWHIECSAMS + G FDIHGGG DL FPHHE
Sbjct: 177 DPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 236
Query: 247 NEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
NEIAQS A W+HNGF+ ++G KMSKS GNF TI E+
Sbjct: 237 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 296
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 297 L-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPMP 349
Query: 352 LS-----------ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK 398
A+ +D +TV A+ L +LA E K N L A I+G+
Sbjct: 350 SEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRD 409
Query: 399 EHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 410 PTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT----- 464
Query: 451 GQRMTRWKQ 459
T W++
Sbjct: 465 -AGGTTWRR 472
>gi|258626834|ref|ZP_05721641.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
gi|258580881|gb|EEW05823.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM603]
Length = 459
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 176/481 (36%), Positives = 253/481 (52%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L+Q +I G AY N +++F+ YG S++ +++ + G RV +
Sbjct: 113 RATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGKYDEYGKLSKQDLEQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLDRRVPAAGGEEYLSRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L + A ++GI +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMRELADVIGILYQEPETFFQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L++ R +K +++AD R +L G +LED N T W++
Sbjct: 405 SAEDEEAEQIEALIKLRNDSRAVKDWANADMARDKLNEMGIVLEDCPN------GTTWRR 458
Query: 460 K 460
K
Sbjct: 459 K 459
>gi|152973937|ref|YP_001373454.1| cysteinyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|187629791|sp|A7GK01|SYC_BACCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|152022689|gb|ABS20459.1| cysteinyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 465
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 176/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ ++MYVCGPTVY++ HIGNARP +VFD + R L +
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEEKKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEHKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IAERFIEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ + T YG S + I++ + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYYRTKEFEGYGKLSHQAIEDLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDSIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KPFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
+IR ML HYR PI+F+ + L L + T +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTTYRNLKHRIESSTDLTDHNEKWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A +A+ +D NT +AI L+ LA + + +
Sbjct: 345 AEMKEFQSAFEAAMDDDFNTANAITELYNLANHANQYLLEEHTSKVVIEAYINQLEMLFR 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ KE L + IE L+Q+R+ K + F+ AD IR L+ + ILED
Sbjct: 405 ILGLVFTKEEL---LDKEIEALIQKRIEARKNRDFALADKIRDDLKERNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|221141034|ref|ZP_03565527.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|302750421|gb|ADL64598.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6008]
Length = 466
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|324324079|gb|ADY19339.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 465
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|261379506|ref|ZP_05984079.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
gi|284797969|gb|EFC53316.1| cysteine--tRNA ligase [Neisseria subflava NJ9703]
Length = 473
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKVGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|77917718|ref|YP_355533.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
gi|109894916|sp|Q3A8C9|SYC_PELCD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|77543801|gb|ABA87363.1| cysteinyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 481
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/501 (37%), Positives = 261/501 (52%), Gaps = 67/501 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNT+ + EF+ + P + MYVCG TVYD+ HIG+AR +VFD++YR L++
Sbjct: 1 MSLRVYNTMTGRKEEFEPLQPGKVGMYVCGVTVYDYCHIGHARANVVFDIIYRYLQFIGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TD+DDKII+RA + S + + Q F +D RL PT Q
Sbjct: 61 D--VTYVRNYTDVDDKIIKRANERGISS------DTLAGEFIQAFDEDMNRLGLAEPTIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++ L+Q +I G AYE+ ++ F P+Y S+R +DE + G R+
Sbjct: 113 PKATCHIDHIVNLVQRLIDRGIAYESQGDVYFSVEDFPSYLKLSKRNMDEMRSGARITPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 EQKRNPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSMEYLGESFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI ++L +++
Sbjct: 233 PHHENEIAQSEGATG-KPFVKYWLHNGFVNVNQEKMSKSLGNFFTIRDIL-------QTY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
V+R +L HYR PIDF+ Q L +A + LS++ + + +
Sbjct: 285 DPEVLRFFILTAHYRSPIDFSDQNLQDARLGLSRFYEGLHAASEVLAACPPGDVTSEAGA 344
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAH------ 390
+ A+ +D NT +AI L R KN + + A
Sbjct: 345 TLENVFREAMDDDFNTAAAIGHLFDAVRTINRLITEKGFRKNREKVAQVRALYDALLKLG 404
Query: 391 -------------ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ + + IE +++R K K F+ AD IR +L +
Sbjct: 405 GVLGLFVSDPAAWLKQMNLAMLATTGYTESDIEDFIRQRQEARKNKDFARADEIRDELAA 464
Query: 438 KGFILEDYKNPDNGQRMTRWK 458
KG L D G + T WK
Sbjct: 465 KGIQLLD------GPQGTAWK 479
>gi|325208933|gb|ADZ04385.1| cysteinyl-tRNA synthetase [Neisseria meningitidis NZ-05/33]
Length = 473
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|257424643|ref|ZP_05601070.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257427311|ref|ZP_05603710.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257429947|ref|ZP_05606331.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432649|ref|ZP_05609009.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257435553|ref|ZP_05611601.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282903117|ref|ZP_06311008.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282904907|ref|ZP_06312765.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907857|ref|ZP_06315692.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910170|ref|ZP_06317974.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913362|ref|ZP_06321151.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282918317|ref|ZP_06326054.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282923279|ref|ZP_06330959.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|283957327|ref|ZP_06374780.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500408|ref|ZP_06666259.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509353|ref|ZP_06668064.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
gi|293523940|ref|ZP_06670627.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|257272213|gb|EEV04336.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257275504|gb|EEV06977.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257279144|gb|EEV09745.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282064|gb|EEV12199.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257284744|gb|EEV14863.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282314147|gb|EFB44537.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|282317451|gb|EFB47823.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282322394|gb|EFB52716.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282325562|gb|EFB55870.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328241|gb|EFB58519.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331732|gb|EFB61243.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596072|gb|EFC01033.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|283790778|gb|EFC29593.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290920903|gb|EFD97964.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|291095413|gb|EFE25674.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467450|gb|EFF09965.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
Length = 471
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 256/483 (53%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 5 KMITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+R+++ +N + I K F +D L T
Sbjct: 65 --NVEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSN 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 117 PRVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL F
Sbjct: 177 EHKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 289 DPDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYID 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I + + +D NT +AI A + LA+ + K ++ + +
Sbjct: 349 QIDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + + ++ + +EKL++ER K K F+ AD IR L+S+ ILED
Sbjct: 409 LGVPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRF 468
Query: 452 QRM 454
+R
Sbjct: 469 KRG 471
>gi|304392050|ref|ZP_07373992.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303296279|gb|EFL90637.1| cysteinyl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 500
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 234/496 (47%), Positives = 312/496 (62%), Gaps = 40/496 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YNTL R F IDP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3 QLTLYNTLTRSKEPFTPIDPNNVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRHIYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII+RAR++ P + +N AI+ +T T QF D L CL PT +P
Sbjct: 63 DAVKYVRNITDVDDKIIDRARRDFPDLDLNAAIAKVTESTTAQFQADMKALGCLEPTVEP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+AT HI M+ +I +I G+AY A+ E++FD +S +YG S RK+D+Q+ G RV
Sbjct: 123 KATEHIGGMVEMISTLIAKGNAYVASGAKGREVLFDVTSDDDYGVLSNRKLDDQQAGARV 182
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGKVF 231
+ HK+NP DF+LWK S EPGW+ + GRPGWHIECSAMS +LG+ F
Sbjct: 183 AVESHKRNPGDFVLWKESAADEPGWDGGFTSSSGGETIHGRPGWHIECSAMSKAHLGETF 242
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGGLDLIFPHHENEIAQSCCA+ ++ AN+W+HNG+L +EG+KMSKS+GNFIT+++L
Sbjct: 243 DIHGGGLDLIFPHHENEIAQSCCANSTDRMANVWMHNGYLQVEGKKMSKSDGNFITVHDL 302
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTSTSK 344
L T+K GGR WP V+RLA+LMTHYREP+DFTV+RL EA+ +L K ++ +K
Sbjct: 303 LHTEKVGGRKWPGEVVRLAILMTHYREPLDFTVRRLEEADDILIKLNRIFDSLMTSTFAK 362
Query: 345 GIIDPAVLSALYNDLNTV-----------SAIQALHKLAREST---------KNHDLLPI 384
I P + + T + L L RE K D L
Sbjct: 363 AISRPPERAGTNSAYRTANRTILSLVEDLNFKAVLDFLIRELRVSYHNLSEEKQSDWLDA 422
Query: 385 FNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+LGI+ + ++ I V+ R + K + AD IR +L ++G L+
Sbjct: 423 LARIFLMLGIKPAPQQTRNDVRDSQIAYAVRSRAEAIASKNWPVADRIRDELLAQGIQLK 482
Query: 444 DYKNPDNGQRMTRWKQ 459
D K+P+ G+R T W+
Sbjct: 483 DGKDPETGERTTTWEV 498
>gi|15896425|ref|NP_349774.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|21264018|sp|Q97ED6|SYC_CLOAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15026246|gb|AAK81114.1|AE007813_1 Cysteinyl-tRNA synthetase [Clostridium acetobutylicum ATCC 824]
gi|325510582|gb|ADZ22218.1| cysteinyl-tRNA synthetase [Clostridium acetobutylicum EA 2018]
Length = 464
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 166/478 (34%), Positives = 248/478 (51%), Gaps = 48/478 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ RK EF + P+ ++MYVCGPTVY+F HIGNAR IVFD + + Y
Sbjct: 1 MKIYNTMTRKKEEFVPVKPNEVQMYVCGPTVYNFFHIGNARTFIVFDTVRKYFEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I +A E S+ + + +++ +D L T PR
Sbjct: 59 KVNFIQNFTDIDDKMIAKANNEGVSV------KELGDRYIKEYYEDADGLNLERATCNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I ++I ++ + G+AYE + ++ F+T++ YG S + ++++ G +
Sbjct: 113 ATEYIGKIIDFVKGLQDEGYAYEIDGDVYFNTNAFKEYGKLSGQNLEDRMAGATIAVDDR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+PADF LWK P EP WESPWG+GRPGWHIECS M+ LG DIH G +DLIFPH
Sbjct: 173 KKSPADFALWKSEKPGEPSWESPWGKGRPGWHIECSCMARDLLGDTIDIHAGAIDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + W+H +LN+ KMSKS NF+T ++L + + A
Sbjct: 233 HENEIAQSEARTG-KPFSKYWMHAAYLNINNEKMSKSLNNFLTARDIL-------KEYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
VIRL +L HYR P++FT + + A+ L + T + G +
Sbjct: 285 EVIRLFLLSAHYRTPLNFTEESIEAAKTSLERLYNTINNLGSLLNNTAESNDDSEYLKAL 344
Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGI 394
+ + +D NT I + LA++ N + + LGI
Sbjct: 345 DSYREKFIEKMDDDFNTADGISVIFDLAKDINININGKSSKAAVEKAISLMRELGKPLGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E N + I+ L+++R K K ++ AD IR L+ +G +LED +
Sbjct: 405 LQKVEKHN--LEDEIQNLIEQRQNARKNKDWALADKIRDDLKERGIVLEDTPEGIRWK 460
>gi|308390183|gb|ADO32503.1| cysteinyl-tRNA synthetase [Neisseria meningitidis alpha710]
Length = 699
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 573
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 574 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 633
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 634 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|283469822|emb|CAQ49033.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ST398]
Length = 466
Score = 395 bits (1015), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|261393406|emb|CAX51042.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase; CysRS) [Neisseria
meningitidis 8013]
Length = 473
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 189/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWGRGRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 347
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K N L A I+G+
Sbjct: 348 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|168187713|ref|ZP_02622348.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
gi|169294420|gb|EDS76553.1| cysteinyl-tRNA synthetase [Clostridium botulinum C str. Eklund]
Length = 466
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 166/489 (33%), Positives = 255/489 (52%), Gaps = 57/489 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ R+ EF+ I + MYVCGPTVY++ HIGN R +VFD + R Y
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGQVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I++A +E N + + + Q++ KD L T PR
Sbjct: 59 KVNFIQNFTDIDDKMIKKANEE------NITVKELGDRFIQEYYKDADGLNIKRATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT ++ ++I ++++I G+AYE N ++ F+T YG S + +D+ + G R+
Sbjct: 113 ATEYMDEIIEFVRDLIDKGYAYEVNGDVYFNTKQFKEYGKLSGQNLDDLQAGARISIDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP W+ PWG+GRPGWHIECS M+ LG DIH GG DL+FPH
Sbjct: 173 KKDPMDFAIWKSEKPGEPSWDCPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + A+ W+H+ +LN++ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARNG-KAFAHYWMHSAYLNIDNKKMSKSLNNFFTTREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
V+RL ML HYR P++F+ + L A+ +
Sbjct: 285 EVVRLFMLSAHYRTPLNFSNELLQSAKASNERLYNAIGNLERLLDEVKIDKITEDEKEYV 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + + +D NT AI + L ++ N + L +
Sbjct: 345 KNLNSYKEKYIEKMDDDFNTADAIAVIFDLVKDINTNINTESSKELVEYSLELIRELGKP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI L +++ IEKL+++R K + ++ AD IR L+++G +LED
Sbjct: 405 LGILQKSTIL--DLNTEIEKLIEQRQQARKDRDWALADKIRDDLKARGIVLEDT------ 456
Query: 452 QRMTRWKQK 460
+ RWK++
Sbjct: 457 PQGVRWKKE 465
>gi|15677904|ref|NP_275072.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|30316184|sp|Q9JXE6|SYC_NEIMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|7227346|gb|AAF42401.1| cysteinyl-tRNA synthetase [Neisseria meningitidis MC58]
gi|325139404|gb|EGC61944.1| cysteinyl-tRNA synthetase [Neisseria meningitidis CU385]
gi|325201129|gb|ADY96584.1| cysteinyl-tRNA synthetase [Neisseria meningitidis H44/76]
Length = 473
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGKLTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 347
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 348 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|325129292|gb|EGC52130.1| cysteinyl-tRNA synthetase [Neisseria meningitidis OX99.30304]
gi|325135312|gb|EGC57933.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M0579]
gi|325201281|gb|ADY96735.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240149]
Length = 473
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPIEFLQGGAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|319638892|ref|ZP_07993650.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
gi|317399796|gb|EFV80459.1| cysteinyl-tRNA synthetase [Neisseria mucosa C102]
Length = 473
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGDLTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTSRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDANLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|163760568|ref|ZP_02167649.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
gi|162282183|gb|EDQ32473.1| cysteinyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
Length = 505
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 250/504 (49%), Positives = 324/504 (64%), Gaps = 45/504 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++K +NTL R EFQ ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ Y
Sbjct: 1 MSELKFWNTLTRVKEEFQPIDKDNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G VTYVRNITD+DDKI RA +++P +P+N+AI+ +T K +F KD L CL PTH
Sbjct: 61 GADHVTYVRNITDVDDKINARALRDYPDLPLNEAIAKVTEKTANRFHKDAAALGCLEPTH 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
+PRAT HI M+ +IQ +I G+AY + E++F SS+P+YG S RK ++Q+ G
Sbjct: 121 EPRATAHIDGMVKMIQTLIDKGNAYVTSGREGREVLFAVSSMPDYGKLSNRKPEDQQAGA 180
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWG--------RGRPGWHIECSAMSSHYLGK 229
R+ + HK+NPADF+LWK S EPGW+ + GRPGWHIECS MS H+LG
Sbjct: 181 RIAVEDHKRNPADFVLWKESASDEPGWDGVFADGGQTISIHGRPGWHIECSVMSEHHLGA 240
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGGLDLIFPHHENEIAQSCCA ++ AN+W+HNGFL +EG+KMSKS+GNF+TI
Sbjct: 241 TFDIHGGGLDLIFPHHENEIAQSCCAHGNDRMANLWMHNGFLQVEGKKMSKSDGNFVTIA 300
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSK 344
ELLET KFGGR WP V+RLAMLMTHYREPIDF+V+RL EA I LS W +
Sbjct: 301 ELLETDKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEANISLSNWLGPHARRGVPED 360
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGI 394
G + V+ AL +DL+ +A + + ES K D L A+ LG+
Sbjct: 361 GSVSKEVVRALSDDLDFSAAKLVIDFMLAESRKVTDLDQESIGKTKLRNDLAATLVWLGL 420
Query: 395 ----------EVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLE 436
K+ L + A ++ V ERL + K ++ AD IR +L
Sbjct: 421 AKQDEDFAVARANKQGLRAVVEAALVGLKASDVDSRVNERLAFIAAKNWAEADRIRDELL 480
Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
++G L+D K+P+ G+R+T W+ K
Sbjct: 481 AQGIQLKDGKDPETGERVTTWEVK 504
>gi|330686235|gb|EGG97847.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU121]
Length = 466
Score = 395 bits (1014), Expect = e-108, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 259/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE+N ++ F T +YG S + ID+ K+G R+
Sbjct: 113 RVMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
V+R M+ HYR PI++ ++ ++ A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQ 344
Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + + ++ + +L
Sbjct: 345 IDQILENFEAVMDDDFNTANAVTAWYDLAKLANRYVLENVTSSKVIAQFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + IE+L++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGNQQDDLLDEEIEQLIEERNEARKNKDFARADEIRDHLKEQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|297590580|ref|ZP_06949219.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|297576879|gb|EFH95594.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|312439051|gb|ADQ78122.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193893|gb|EFU24287.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 466
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 255/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N + I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|317126835|ref|YP_004093117.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315471783|gb|ADU28386.1| cysteinyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 466
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 180/489 (36%), Positives = 267/489 (54%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL RK+ FQ I+ + MYVCGPTVY++ HIGNARP +VFD++ R L+Y
Sbjct: 1 MTIQVYNTLSRKVEPFQPIEEGKVSMYVCGPTVYNYIHIGNARPAVVFDMVRRYLQYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y+ N TD+DDKII+ A + +P I + + + +DT L
Sbjct: 61 E--VQYISNFTDVDDKIIKAAEEMGEDVPT------IAERFIEAYFEDTAALGVQKADKH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T +P++I I +I G+AYE+ ++ F T YG S + ID+ K+G+R+
Sbjct: 113 PRVTETMPEIIDFIARLIEKGYAYESQGDVYFRTRKFDGYGKLSHQSIDDLKLGSRIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W+SPWG GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 DKKEDPLDFVLWKSAKEGEIYWDSPWGNGRPGWHIECSAMVKKYLGDTIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + +K AN WIHNG++N++ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSESLNG-KKMANYWIHNGYINIDNEKMSKSLGNFILVHDII-------KKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ++ HYR PI+F+ ++LT A+ L + T +
Sbjct: 285 DPEVVRFFIVNAHYRSPINFSDEQLTSAKSGLERIKTTYLNVKHRLSETANLGEDVEKWT 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
G+I L A+ +D N+ +A+ A+ L + + + ++
Sbjct: 345 KDMGVIHTRFLEAMDDDFNSANAVAAMFDLIKLGNLYLREDHTNKRVLEYFIKQLDDMSY 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + K+ + + IE L+QER+ K + F+ AD IR L+ + ILED
Sbjct: 405 VLGLTLNKKE--EILDEEIEVLIQERIDARKNRNFARADEIRDLLKEQNIILEDT----- 457
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 458 -PQGTRWKR 465
>gi|47569824|ref|ZP_00240494.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553517|gb|EAL11898.1| cysteinyl-tRNA synthetase [Bacillus cereus G9241]
Length = 465
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 174/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E + IE L+Q+R+ K + F+ +D IR L+++ ILED
Sbjct: 405 ILGLELAQE---DLLDEEIEALIQKRIEARKNRDFALSDQIRDDLKNRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|121635739|ref|YP_975984.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
gi|120867445|emb|CAM11217.1| cysteinyl-tRNA synthetase [Neisseria meningitidis FAM18]
Length = 699
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 573
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 574 MPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 633
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 634 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|113867241|ref|YP_725730.1| cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
gi|123134207|sp|Q0KCA9|SYC_RALEH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|113526017|emb|CAJ92362.1| Cysteinyl-tRNA synthetase [Ralstonia eutropha H16]
Length = 462
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 252/479 (52%), Gaps = 45/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD+++R LR E
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYE- 62
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+NITDIDDKII RA + + I +T++ Q +D L + P H+PR
Sbjct: 63 -VTYVQNITDIDDKIIRRAAENG------ETIGELTTRFIQYMHEDAAALGVIRPDHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+++PQM+ +I + G AY+ ++ ++ + YG S + +++ + G RV
Sbjct: 116 ATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFAGYGKLSGKSLEDLRAGERVSAND 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + EP W+S WG GRPGWHIECSAMS LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A + N+W+HNGF+ + KMSKS GNF TI E+L +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNMWMHNGFVRINDEKMSKSLGNFFTIREVL-------K 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA 350
S+ A V+R +L HYR P++++ L +A L++
Sbjct: 288 SYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPHARR 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEHL------- 401
A+ +D NT A+ L LA E + A LG+ H
Sbjct: 348 FAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQGGRS 407
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+ R + F+ AD IR QL G +LED T W++
Sbjct: 408 DDGISPEQIETLIAARKTAKVERNFAEADRIRAQLLEAGIVLEDKPGGA-----TEWRR 461
>gi|304381872|ref|ZP_07364519.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|304339658|gb|EFM05605.1| cysteine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
Length = 466
Score = 395 bits (1014), Expect = e-107, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +D++ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDIVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|49482759|ref|YP_039983.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295427067|ref|ZP_06819703.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|56749424|sp|Q6GJD9|SYC_STAAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|49240888|emb|CAG39555.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|295128855|gb|EFG58485.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
Length = 466
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 255/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N + I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQTVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGATIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R ++ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFVISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKKADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|89100736|ref|ZP_01173591.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084553|gb|EAR63699.1| cysteinyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 465
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 167/489 (34%), Positives = 248/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNT+ R+ EF ++ ++MYVCGPTVY++ HIGNARP IVFD + R L +
Sbjct: 1 MAIAIYNTMSRQKEEFIPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y+ N TD+DDK+I A++ +P I + + +D + L C
Sbjct: 61 D--VQYISNFTDVDDKLIRAAKELGEDVPS------IAERFIDAYFEDVSALGCKRADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I+ +I G AYE+N ++ F T YG S++ IDE ++G R+
Sbjct: 113 PRVTESMDLIIQFIEALIEKGFAYESNGDVYFHTRRFDEYGKLSQQSIDELRVGARIAVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDALDFALWKTAKEGEISWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFVLVHDII-------KKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI+++ + L L + + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSDELLENTRSGLERITTSYQNLAHRKEASAELTDNNSEWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
+ + + +D NT + I L +L+R++ + F
Sbjct: 345 KKIEDLHGEFIKEMDDDFNTANGISVLFELSRQANYYLLEKNTSVEVIEAFMKEFEILFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + E L + I+ L+++R K + F +D IR QL+ ILED
Sbjct: 405 VLGLSLGGEEL---LDDEIDALIEKRNQARKERNFQLSDQIRDQLKEMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|332800102|ref|YP_004461601.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
gi|332697837|gb|AEE92294.1| cysteinyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
Length = 466
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 181/488 (37%), Positives = 258/488 (52%), Gaps = 56/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL RK EF ++ ++++MY CGPTVYDF HIGNAR I FD++ L++ +
Sbjct: 1 MLIYNTLTRKKEEFVPLEDNHVKMYTCGPTVYDFFHIGNARVFITFDMVRNYLKFRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDK+I+RA E ++ + + ++ D L PR
Sbjct: 60 -VTFVQNFTDIDDKMIKRANDEGITV------KELGERFIGEYFHDADTLGITRADVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI ++I LI+ ++ G+AYE N ++ + TS +YG S + IDE K G R+
Sbjct: 113 ATEHIDEIIDLIKILVEKGYAYEVNGDVYYKTSRFKDYGKLSHQNIDELKAGARIEPGEQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK P EP W+SPWG+GRPGWHIECS M+ YLG+ DIHGGG DLIFPH
Sbjct: 173 KKDPIDFALWKAQKPGEPAWDSPWGKGRPGWHIECSVMAMKYLGETIDIHGGGPDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A ++H G+LN+ +KMSKS GNF T+ ++L +++
Sbjct: 233 HENEIAQSEAATG-KPFARFFMHVGYLNINNQKMSKSLGNFFTVRDIL-------KTYDP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
V+R ML +HYR PI+F+ + +A+ L + S ++
Sbjct: 285 EVLRFFMLSSHYRNPINFSQDLMEQAKNSLERLHNAIYSMEHLESVAQDKDLAEDDEKYL 344
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ A+ +D NT AI +L + RE D +
Sbjct: 345 NKLETNKNEFIKAMDDDFNTADAIASLFNIVREYNMFVDENSPKKLIVDTKDAILTLGSV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ K + IE+ + ER K K ++ AD IR L+++G ILED
Sbjct: 405 LGL-FRKFMEKTLLDEEIEQKIIEREQARKEKNYALADKIRDDLKAQGIILEDT------ 457
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 458 PAGVRWKR 465
>gi|94265990|ref|ZP_01289713.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
gi|93453456|gb|EAT03872.1| Cysteine--tRNA ligase [delta proteobacterium MLMS-1]
Length = 494
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 178/501 (35%), Positives = 253/501 (50%), Gaps = 67/501 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I+NT + F + +++RMYVCG TVYD+ HIG+AR ++VFD+LYR LR+
Sbjct: 1 MPILIHNTKTNRKEPFTPLTDNHVRMYVCGITVYDYCHIGHARSVLVFDMLYRYLRHRRY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN TDIDDKII+RA ++ S ++ + Q F +D L PT +
Sbjct: 61 D--VTFVRNFTDIDDKIIKRAAEQQTS------CQELSQRFIQAFHEDMAALGTEPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT H+P+MI LI+ +I G AY A ++ F + YG S R +DE + G R+
Sbjct: 113 PKATEHLPEMIALIEELIAKGLAYPAGGDVYFRVRNFTEYGKLSHRALDEMRSGARIAVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM YLG+ FDIHGGG DL+F
Sbjct: 173 ELKEDPLDFVLWKGSKPEEPAWESPWGPGRPGWHIECSAMGRKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN WIH+GF+ ++ KM+KS GNF+TI ++L + +
Sbjct: 233 PHHENEIAQSEGATG-KPFANFWIHHGFVTIKDEKMAKSLGNFLTIRDVL-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
PA V+RL + THYR P+D++ + +AE LS+
Sbjct: 285 PAEVLRLLLFSTHYRNPVDYSEAAMADAETALSRLYAALAAVGKLPAGGAPEATSVITAK 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHDLLP 383
++ A+ D N+ A+ + K D
Sbjct: 345 DRQKLDNLESDFHQAMDIDFNSAKALGRFFDTVKIINKVRQALPATPATRDLELLRDSAA 404
Query: 384 IFNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYI 431
I G+ IEKL+ +R + ++ AD I
Sbjct: 405 KLRELGGIFGLLQEDPAAYLARRQERLLAGLDITPGEIEKLLAQRQTARQNGDWAEADRI 464
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L +K ++D + + +
Sbjct: 465 RDLLAAKKIAIKDGPDGTSWE 485
>gi|298693861|gb|ADI97083.1| cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED133]
Length = 466
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|327438250|dbj|BAK14615.1| cysteinyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 467
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 260/489 (53%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+N+L R+ F ++ ++MYVCGPTVY++ HIGN+RP+IV+D + R L+Y
Sbjct: 1 MTIQIFNSLTRQKEPFIPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYLQYAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V N TD+DDKII+ A + + + S++T + + +D T L C
Sbjct: 61 E--VKFVSNFTDVDDKIIKAANE------LGEETSVLTDRFIAAYFEDITALGCQKADAH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I I+ +I G+AYE+ ++ + T YG S + ID+ K+G R+
Sbjct: 113 PRVTEHMDDIIEFIKVLIDKGYAYESQGDVYYRTRKFNGYGKLSHQSIDDLKVGARIEAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E W SPWG GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKAAKAGEIKWASPWGEGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNG++N++ KMSKS GNFI +N++ +
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDI-------RQQI 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI+F + A+ L + + T+
Sbjct: 285 DPQVLRFFMLSVHYRNPINFAQDLVEAAKNGLDRIRTSYTNVAHRLTSSASLGDNSEQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPI----FNASAH 390
G I +A+ +D NT +A+ AL +L E+ + ++L F+ +
Sbjct: 345 EKIGQIKVDFENAMNDDFNTANAVSALFELSHIANVYLNEANTDKEVLQAILTMFDTIGN 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI + E + IE L++ER K + F+ +D IR QL +LED +
Sbjct: 405 VLGIHIKVEA--GLLDEEIEALIEERNQARKNRDFARSDEIRDQLLGMDIVLEDTR---- 458
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 459 --QGTRWKR 465
>gi|323483933|ref|ZP_08089308.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
WAL-14163]
gi|323693471|ref|ZP_08107680.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
gi|323402771|gb|EGA95094.1| hypothetical protein HMPREF9474_01057 [Clostridium symbiosum
WAL-14163]
gi|323502478|gb|EGB18331.1| cysteine-tRNA ligase [Clostridium symbiosum WAL-14673]
Length = 468
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 174/485 (35%), Positives = 244/485 (50%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R EF ++ ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIFNTLSRTKEEFIPLEEGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E I+ + ++ KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVDA------DTISKRYIEECKKDMAMMNVKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +IQ++I GHAY + + F T S YG S + +++ + G R V
Sbjct: 113 ATEEICGMLDMIQDLIDKGHAYTGKDGTVYFRTKSFKEYGKLSHKNLEDLQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW GRPGWHIECS MS YLG DIH GG DL
Sbjct: 173 GEEDKEDPTDFVLWKPKKDGEPYWESPWCNGRPGWHIECSVMSKKYLGDSIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS ++ + A W+HN FLN++ RKMSKS GNF T+ E+
Sbjct: 233 VFPHHENEIAQSEASNG-KTFAKYWMHNAFLNIDNRKMSKSLGNFFTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------- 345
+ V+R ML HYR P++F+ + + ++ L +
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILTAVEKLNDALKAAEGELTESEK 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+++ +D NT AI A+ +L + S L
Sbjct: 345 ENITSAKEFVQKFEASMDDDFNTADAISAVFELVKFSNTTASENSSKAYLSWLKETIEKL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI E + + IE ++ +R K K F+ AD IR +L G +LED +
Sbjct: 405 CDVLGIIT--EKKEEILDSEIEDMIAQRQQARKDKNFALADEIRGKLLEMGIVLEDTREG 462
Query: 449 DNGQR 453
+R
Sbjct: 463 VKWKR 467
>gi|238916434|ref|YP_002929951.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
gi|259511832|sp|C4Z3N5|SYC_EUBE2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|238871794|gb|ACR71504.1| cysteinyl-tRNA synthetase [Eubacterium eligens ATCC 27750]
Length = 472
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 179/489 (36%), Positives = 251/489 (51%), Gaps = 58/489 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ EF+ ++ ++MYVCGPTVY+ HIGNARPMIVFD + R L Y +
Sbjct: 1 MRIYNTLSRRKEEFKPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+++ + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVSAE------EISTRYIAECKKDMEGMNIKPATTHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR------ 178
AT I MI +IQ +I G+AYE N + + T YG S++ ID+ + G R
Sbjct: 113 ATQEIGGMIDMIQTLIDKGYAYEVNGTVYYRTRKFAEYGKLSKKNIDDLEAGHRDEAHSL 172
Query: 179 -VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + K++P DF+LWK EP W SPW GRPGWHIECS MS YL DIH GG
Sbjct: 173 KVTGEDEKEDPLDFVLWKPKKEGEPSWPSPWSDGRPGWHIECSVMSKKYLADEIDIHAGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENEIAQS A+ + + W+HN FLN++ +KMSKS GNF T+ ++
Sbjct: 233 EDLIFPHHENEIAQSEAANGV-PFSKYWMHNAFLNIDNKKMSKSLGNFFTVRDI------ 285
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
R + V+R ML HYR P++F+ + A+ L + +
Sbjct: 286 -SREYDLEVLRFFMLSAHYRNPVNFSHDLMESAKNGLDRILTAVDNLRHLSENAKDVIMT 344
Query: 345 ----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
I ++ +D NT AI A+ +L + + N L+
Sbjct: 345 EDEKKIIASIDDIYKKFEDSMDDDFNTADAISAIFELVKLANSNSSSDNSKEYIDTLMKK 404
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
ILG++ K+ + + IE L+ ER K K F+ AD IR +L +KG +L+D
Sbjct: 405 ITTLTDILGLKTDKKE--EMLDEDIEALIAERQQARKDKNFARADEIRDELLAKGIVLKD 462
Query: 445 YKNPDNGQR 453
+ R
Sbjct: 463 TREGVRWSR 471
>gi|251809946|ref|ZP_04824419.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875020|ref|ZP_06283895.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|251806489|gb|EES59146.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|281296348|gb|EFA88867.1| cysteine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|329734647|gb|EGG70954.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU028]
Length = 466
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 169/482 (35%), Positives = 260/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TS 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQH 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + +++ + +L
Sbjct: 345 IDKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
GI + + ++ + IE+L++ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GIPLKSKETDELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|241667314|ref|ZP_04754892.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254875866|ref|ZP_05248576.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254841887|gb|EET20301.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 459
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 178/478 (37%), Positives = 249/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L K EF+ I+P+ I+MYVCG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T+VRNITDIDDKII+RA + + + + + +L L PT +PRAT
Sbjct: 61 TFVRNITDIDDKIIKRANENG------ETTDQLVERTIKSMHDAFDKLNILRPTKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+MI +I+ ++ G AY+ N ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 QTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TINE++E +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
VIR + T YR I+++ + L A + + + + A
Sbjct: 287 VIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDANEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IEKL+ ER K K ++ AD IR +L+++G ILED T WK+
Sbjct: 407 DGIDVSEIEKLIAERAQAKKDKNYARADEIRNELQNQGIILEDSAT------GTTWKK 458
>gi|291333822|gb|ADD93505.1| cysteinyl tRNA synthetase [uncultured marine bacterium
MedDCM-OCT-S04-C13]
Length = 458
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 190/478 (39%), Positives = 263/478 (55%), Gaps = 42/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L + F +DP + MYVCGPTVY+F HIGNARP +VFD L+R+L+ Y
Sbjct: 1 MSLVLYNSLTKAKQPFVPLDPERVTMYVCGPTVYNFVHIGNARPAVVFDTLFRVLQRLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI+ A + + + IS ++++ Q + D + L CL P+
Sbjct: 60 -PQVVYARNITDIDDKIMNTAAE------LGEDISQLSTRFAQAYFDDMSALNCLEPSIV 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT HIP+MI ++Q ++ GHAY A ++F S+ +YG+ S R +++ G RV
Sbjct: 113 PYATAHIPEMISMVQRLVDKGHAYVAEGNVLFAVESMADYGALSGRSLEDMMAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+ DF+LWK ST EPGW+SPWGRGRPGWH+ECSAM +LG DIH GG DLIF
Sbjct: 173 SYKRYAGDFVLWKPSTDHEPGWDSPWGRGRPGWHLECSAMIEKHLGVTIDIHAGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + AN W+HNGF+N++G KMSKS GNF +N+LL + +
Sbjct: 233 PHHENEIAQSCCAHDGQPFANYWLHNGFINIDGEKMSKSLGNFRMVNDLL-------KQY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------DPAVLSALY 356
P V+R +L +HYR +F L A L D AL
Sbjct: 286 PGEVLRYVILSSHYRSEQNFGKDLLDSAWRSLDSLYGYLRGLPETEAVIDRDSISFKALL 345
Query: 357 NDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKE----------HL 401
+DLNT AI L++LA+E D L A ++G+
Sbjct: 346 DDLNTPVAISELYRLAKEMHTASDSEKAALHSELMGLAELMGLLQQDPEQWFKQSRDGEA 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE+L+ +R K ++ AD +R+QL +G +LED + T W++
Sbjct: 406 ESISEAEIERLIAKRQQAKADKDYAGADQVREQLLEQGVVLEDSR------EGTSWRR 457
>gi|255527266|ref|ZP_05394147.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187245|ref|ZP_06855641.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255509051|gb|EET85410.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048116|gb|EFG87554.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 465
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 166/488 (34%), Positives = 254/488 (52%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ RK EF + ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVFNTIARKKEEFIPLSEKEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA+++ N + + K +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRAKED------NITVKELGDKFIEEYYKDADSLNIERATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +++ ++ +I G+AYE + ++ F T +YG S + +++ + G R+
Sbjct: 113 ATEYINEIVDFVKELIDRGYAYEVDGDVYFHTKKFKDYGKLSGQNLEDLQAGARISVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP W+SPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAVWKSQKPGEPAWKSPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLAFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS + A W+H+ F+N+ KMSKS NF T E+LE + +
Sbjct: 233 HENEVAQSEARTG-KTFAKYWMHSAFVNVNNEKMSKSLNNFFTAREILE-------KYDS 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
VIRL ML HYR I+F+++ L + + + + ++ +
Sbjct: 285 DVIRLFMLSGHYRTQINFSMESLESMKAAMDRLYNSISNLESLLEETKQEELMDQEVEYI 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT A+ + L R+ N + L +
Sbjct: 345 KILDGYKEKYIEKMDDDFNTADAVSVIFDLIRDINTNVKIDSSKKLIKHCLNLIKELGKP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI ++ N+ IE L++ER K K ++ +D IR L+ +G +LED
Sbjct: 405 LGIL--QKSKKGNLEEKIEALIEERQQARKDKNWALSDKIRDDLKEQGILLEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 PQGVRWKR 464
>gi|222053657|ref|YP_002536019.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
gi|254781681|sp|B9LZV4|SYC_GEOSF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|221562946|gb|ACM18918.1| cysteinyl-tRNA synthetase [Geobacter sp. FRC-32]
Length = 494
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 194/516 (37%), Positives = 260/516 (50%), Gaps = 80/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL EF ++P ++MYVCG TVYD HIG+AR +VFDV+YR +
Sbjct: 1 MGLRVYNTLSGNKEEFVPVEPGKVKMYVCGVTVYDHCHIGHARANVVFDVIYRYFCHLGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN TDIDDKII RA +E + + I+ + ++F +D RL PT Q
Sbjct: 61 D--VTYVRNYTDIDDKIINRANREGVTYDL------ISERFIKEFDRDMERLGLKLPTCQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++I L+Q +I AY+A ++ F +Y S R +++ + G R+
Sbjct: 113 PKATEHIDEIISLVQTLIDKDFAYQAGGDVNFCVEKFDSYLKLSGRTLEDMQAGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS YLG FDIHGGG DLIF
Sbjct: 173 ERKRHPMDFALWKEAKPGEPFWESPWGKGRPGWHIECSAMSMKYLGTTFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+N+ KMSKS GNF TI E+L+ +
Sbjct: 233 PHHENEIAQSEAATG-KPFVNYWLHNGFVNINSEKMSKSLGNFFTIKEVLDR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
V+R +L HYR PIDF+ Q LTEAE L + + +
Sbjct: 285 DNEVLRFFLLSAHYRSPIDFSDQNLTEAEAGLERIYKALAAVEETLAAGNGCTGAPVDAS 344
Query: 347 ---------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
I A+ +D NT A+ + L R +
Sbjct: 345 SLNEAEGELFDKTTSISARFGEAMDDDFNTALAMAHVFDLVRCVNRVLSETAGASDNICS 404
Query: 381 ----LLPIFNASAHILG---------IEVCKEHLNKNIS---IAIEKLVQERLILLKMKK 424
+ A +LG +E K N+ IE+L+ ER K K
Sbjct: 405 LCTLIKAEVAKIAGVLGIFSSKPASFLERLKSRKAGNLDIAVDEIERLIAERTAARKAKD 464
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
F +D IR QL +K +L D Q+ T W K
Sbjct: 465 FKRSDEIRDQLAAKNIVLLDS------QQGTTWSVK 494
>gi|206978367|ref|ZP_03239240.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217957665|ref|YP_002336209.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|222093860|ref|YP_002527910.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
gi|226735048|sp|B7HQS4|SYC_BACC7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765178|sp|B9IZH4|SYC_BACCQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|206743428|gb|EDZ54862.1| cysteinyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|217066370|gb|ACJ80620.1| cysteinyl-tRNA synthetase [Bacillus cereus AH187]
gi|221237908|gb|ACM10618.1| cysteinyl-tRNA synthetase [Bacillus cereus Q1]
Length = 465
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 176/489 (35%), Positives = 254/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFIPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------IIDPAVL 352
+IR ML HYR PI+F+ + L L + + D L
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHRMESSTDLTDHDEKWL 344
Query: 353 -----------SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIQAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|30248074|ref|NP_840144.1| cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
gi|61216300|sp|Q82Y45|SYC_NITEU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|30179959|emb|CAD83954.1| Cysteinyl-tRNA synthetase [Nitrosomonas europaea ATCC 19718]
Length = 465
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 180/487 (36%), Positives = 262/487 (53%), Gaps = 52/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+TL R EF + P +RMYVCG TVYD+ H+G+AR ++VFD + R L+
Sbjct: 1 MLKIYDTLTRSRREFIPLTPGEVRMYVCGMTVYDYCHLGHARVLVVFDSVVRWLQTLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII RA + H + S +T++ Q +D L ++P+ +P
Sbjct: 60 -KVIYVRNITDVDDKIIRRALENH------EPFSALTARYIQAMEEDAMALGVISPSFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ MI +I++++ AY +N ++ +D P YG S + +D+ + G RV
Sbjct: 113 RATEYVDSMIAMIESLLNRELAYVASNGDVFYDVRRFPGYGKLSGKSLDDLRAGERVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAMS HYLG FDIHGGG DL F
Sbjct: 173 TNKRDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMSEHYLGDQFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS N W+HNGF+ ++ KMSKS GNF T+ E+L +
Sbjct: 233 PHHENEIAQSEGVHG-HSHVNYWMHNGFVRVDNEKMSKSLGNFFTVREVLTR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
V+R ++ HYR P++++ L +A L +
Sbjct: 285 QPEVVRFFIVRAHYRSPLNYSDAHLNDARSALERLYTVLKNHAPSQDSEVATAVIDWENN 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKE---- 399
+ +SA+ +D NT A+ L LA E+ + D + A +LG+
Sbjct: 345 VYARRFMSAMNDDFNTPEAVAVLFDLASEANRTGDSHYASLLKALGGVLGLLQQPPQQYL 404
Query: 400 ------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE ++Q+RL K + F+ AD +R+QL G ILED +
Sbjct: 405 QYPAHLQDGQYSVEEIENMIQQRLQARKERNFAQADTLRQQLAEAGIILEDS------PQ 458
Query: 454 MTRWKQK 460
T W+++
Sbjct: 459 GTTWRRE 465
>gi|329313250|gb|AEB87663.1| Cysteinyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
T0131]
Length = 466
Score = 394 bits (1013), Expect = e-107, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ P E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKPGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEYVEKLIEERNEARKNKDFARADEIRDMLKSQNIILEDTPRGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|78044929|ref|YP_361143.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|109894889|sp|Q3A9P1|SYC_CARHZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|77997044|gb|ABB15943.1| cysteinyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 465
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 192/486 (39%), Positives = 264/486 (54%), Gaps = 53/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL + EF +P + MYVCGPT Y++ HIGNARP++ FD + R Y E
Sbjct: 1 MKIYNTLTKTKEEFIPREPGKVYMYVCGPTTYNYIHIGNARPIVFFDTVRRYFEYKGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII RA +E S + K ++ KD RL T P+
Sbjct: 60 -VIYVQNFTDIDDKIINRALEEGIS------PIELGQKYIIEYFKDADRLGVKRATVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T HIP++I +++ +I G+AYE + F S +YG S R ++E K G RV
Sbjct: 113 VTEHIPEIIEMVKGLIEKGYAYEVEGNVYFAVDSFSDYGKLSGRDLEELKAGARVEVDEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK++ P EP WESPWG GRPGWHIECSAMS YLG+ FDIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKKAKPGEPYWESPWGPGRPGWHIECSAMSLKYLGENFDIHGGGADLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS + A W+HNGF+ + KMSKS GNF + E+LE +P
Sbjct: 233 HENEVAQSEAFTG-KPFARYWMHNGFITVNQEKMSKSLGNFFLVREILE-------KFPG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
V+R +L THYR P+DF ++L EA+ L + + ++P
Sbjct: 285 RVVRFFLLSTHYRSPLDFDDKKLNEAKAALERVDNFVQNLKEVNPLPGEARIEIQEKITN 344
Query: 350 ---AVLSALYNDLNTVSAIQALHKLARESTKN-------HDLLPIFNASAHI----LGIE 395
A+ +D NT A+ +L +L R +F + ++ GIE
Sbjct: 345 FLRDFNEAMEDDFNTAQAMASLFELVRFGNTQIASGNLTAGDKKLFEEALNVYTQVFGIE 404
Query: 396 V--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ ++I+ +E L++ R L K KK+ AD+IR +L+ +G ILED +
Sbjct: 405 FGVLEKIAGEDITPFVELLIEVRARLKKEKKYDLADFIRDELKKQGIILEDT------PK 458
Query: 454 MTRWKQ 459
RWK+
Sbjct: 459 GVRWKR 464
>gi|254671915|emb|CBA04234.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha275]
gi|325131324|gb|EGC54035.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M6190]
gi|325133259|gb|EGC55925.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M13399]
gi|325137353|gb|EGC59941.1| cysteinyl-tRNA synthetase [Neisseria meningitidis ES14902]
gi|325141357|gb|EGC63840.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 961-5945]
gi|325199172|gb|ADY94628.1| cysteinyl-tRNA synthetase [Neisseria meningitidis G2136]
Length = 473
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 347
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 348 MPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|73540824|ref|YP_295344.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
gi|109894927|sp|Q473D3|SYC_RALEJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|72118237|gb|AAZ60500.1| cysteinyl-tRNA synthetase [Ralstonia eutropha JMP134]
Length = 462
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 177/479 (36%), Positives = 251/479 (52%), Gaps = 45/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD+++R LR +
Sbjct: 4 LNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAGYD- 62
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+NITDIDDKII RA + + I +T++ Q +D L + P H+PR
Sbjct: 63 -VTFVQNITDIDDKIIRRAAENG------ETIGQLTTRFIQYMHEDADALGIVRPDHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+++PQM+ LI + +G AY+ + ++ + YG S + +++ + G RV
Sbjct: 116 ATDYVPQMLDLIGKLEANGLAYQATDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVTAND 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + EP W S WG GRPGWHIECSAMS LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKSAKESEPPESKWNSKWGMGRPGWHIECSAMSCTLLGEHFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A + N+W+HNGF+ + KMSKS GNF TI E+L +
Sbjct: 236 QFPHHENEIAQSEGASG-KPFVNVWMHNGFVRVNDEKMSKSLGNFFTIREVL-------K 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPA 350
+ A V+R +L HYR P++++ L +A L++ +
Sbjct: 288 EYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDTQPGGYAVDWEEAHAKR 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL------- 401
A+ +D NT A+ L LA E + A LG+ H
Sbjct: 348 FAEAMCDDFNTPIAVSVLFDLASEVNRTGSSVAARQLKGLAGTLGLLERDPHTFLQGGKK 407
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE L+ R + F+ AD IR L + G +LED T W++
Sbjct: 408 VDGPSPDEIEGLIAARKTAKAERNFAEADRIRADLLAAGIVLEDKPGGA-----TEWRR 461
>gi|119505713|ref|ZP_01627782.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
gi|119458423|gb|EAW39529.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2080]
Length = 458
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 188/477 (39%), Positives = 266/477 (55%), Gaps = 43/477 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ NTL + F+ DP+ I +YVCGPTVY+ AHIGNARP++ FD+LYR+LR Y
Sbjct: 3 ELRFTNTLTGQKEVFEPRDPNRITLYVCGPTVYNLAHIGNARPVVTFDMLYRVLRALY-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITDIDDKII AR+ N+ I +T + T ++ +D +L L+P +P
Sbjct: 61 PTVVYARNITDIDDKIIAAARER------NEGIDAVTKEFTDKYREDMAQLNALSPDLEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I M LI +I GHAY A ++FD +S+P+YG+ S R +++ G RV
Sbjct: 115 RATENIKPMCDLITQLIARGHAYAAEGHVLFDVTSMPSYGALSGRNLEDMLAGARVEVAD 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S EPGW+SPWG GRPGWH+ECSAM +LG DIHGGG DLIFP
Sbjct: 175 YKRSPGDFVLWKPSAEDEPGWDSPWGWGRPGWHLECSAMIRAHLGDAIDIHGGGRDLIFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQSCC + W+HN +++++G KMSKS GN T+ +LL +P
Sbjct: 235 HHENERAQSCCGYGGD-FVRYWLHNAYVDMDGEKMSKSLGNVRTVRDLLGL-------YP 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------- 356
V+R A+L THYR P++F+ + L A++ L+ + Q + I P +
Sbjct: 287 GEVLRFALLSTHYRSPLNFSGEVLDNAKLTLNSFYQALRNTSDICPEDVRPEDTLAFTAL 346
Query: 357 -NDLNTVSAIQALHKLARESTKNHDLLPI-----FNASAHILGIEVCKEH--------LN 402
+DLNT AI ALH + K A ++G+
Sbjct: 347 LDDLNTPKAIAALHASCKALNKADAKTAATCKGELLAMGRLMGLLGSDPEQWFTESSSSA 406
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE+ + RL K F++AD +R +L++ G LED + T W++
Sbjct: 407 ALTPEDIEQRLAARLEARARKDFAAADAVRDELQAAGIELEDS------PKGTTWRR 457
>gi|253702469|ref|YP_003023658.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
gi|259511834|sp|C6E7P0|SYC_GEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|251777319|gb|ACT19900.1| cysteinyl-tRNA synthetase [Geobacter sp. M21]
Length = 480
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 192/502 (38%), Positives = 257/502 (51%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL EF I+P + MYVCG TVYD HIG+AR +VFD++YR L
Sbjct: 1 MPLRVYNTLTGSKEEFVPINPGKVGMYVCGVTVYDHCHIGHARANVVFDMIYRHLLSKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TDIDDKII RA ++ A + I+ + ++F D RL PT Q
Sbjct: 61 E--VTYVRNYTDIDDKIINRANRDGV------AYNEISERFIKEFDNDMARLMLQLPTFQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HIP++I L+Q +I G AY++ +++ + Y S+R +++ + G R+
Sbjct: 113 PKATEHIPEIINLVQKLIDKGFAYQSGSDVFYRVDRFEGYLKLSKRNLEDMQAGARIDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS+ +LG+ DIHGGG DLIF
Sbjct: 173 ERKEHPMDFALWKGAKPGEPYWESPWGQGRPGWHIECSAMSTKFLGETLDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF TI E+LE+ +
Sbjct: 233 PHHENEIAQSEAASG-KPFVKYWLHNGFVNINSEKMSKSLGNFFTIKEILES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A V+R +L HYR PIDF+ Q L EAE+ L + +
Sbjct: 285 DAEVLRFFLLSAHYRSPIDFSDQNLKEAELGLERIYKALAGIDERLASGAHTPADADNTE 344
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAH 390
A+ +D NT A+ L L R + + A
Sbjct: 345 FAEKVAGFAGRFGDAMDDDFNTALALGHLFDLVRVINRELPTASTGLLEKVKAEVAKMAA 404
Query: 391 ILGI------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LGI + K + + IE L+ ER K K F D IR L K
Sbjct: 405 VLGICDSVPAAFLQRMKDRKTSDMEMSAEEIETLIAERAEARKAKNFKRGDEIRDLLLEK 464
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
+L D + T WK K
Sbjct: 465 NIVLLDS------AQGTTWKVK 480
>gi|172035425|ref|YP_001801926.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|171696879|gb|ACB49860.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
Length = 482
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 171/502 (34%), Positives = 246/502 (49%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R F I+ ++MY CG TVYD+ H+G+AR IV+DV+ R L++
Sbjct: 1 MTLTVYNTLTRNKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIVWDVVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY++N TDIDDKI+ RARQE + + ++ + + + +D L
Sbjct: 61 D--VTYIQNFTDIDDKILNRARQEKTT------MEAVSERFIEAYFEDMECLNVAKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + L+ + G+AY + ++ ++ YG S RK+++ +
Sbjct: 113 PRATHTLNGIQRLVSELEAKGYAYASEGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVA 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
E KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 VEDAEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI ELLE
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQ 339
+ +RL +L HYR+P+DFT + L A
Sbjct: 289 ----KFDPMAVRLFILQAHYRKPVDFTDEALEAATKGWQTLSEGLLFGFQQGSKLGFKEN 344
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
S + +D N + L ++A+E K +LL
Sbjct: 345 RSELLPEFIQRFQDTVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGKTETPSELLQKQW 404
Query: 383 PIFNASAHILGIEVC-----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A A +LG+E E + AIE +++R K K F+ +D IR +L+
Sbjct: 405 QTLIALATVLGLEADSNPVNSEKSDGLDDAAIEAFIEKRKEARKNKNFAESDRIRDELKE 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
+G IL D +T W +
Sbjct: 465 QGVILVDQPGG-----VTIWHR 481
>gi|329890424|ref|ZP_08268767.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
gi|328845725|gb|EGF95289.1| cysteinyl-tRNA synthetase [Brevundimonas diminuta ATCC 11568]
Length = 468
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 182/486 (37%), Positives = 261/486 (53%), Gaps = 47/486 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ I++TL R+ F+ DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR YG
Sbjct: 1 MALHIHDTLRREKRLFEPRDPNRVSLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RN+TD+DDKI +A +E AI IT++ ++ D L P
Sbjct: 61 ADKVVYARNVTDVDDKINAKAAKEGV------AIGEITARYEAAYLADMGLLNVSPPDIA 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T++I + IQ II G AY A ++FD SS P+YG+ S R +D+ G RV
Sbjct: 115 PHVTDYIEAITRQIQAIIDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNP DF+LWK S EP W SPWG GRPGWHIECSAM LG DIHGGG+DL+F
Sbjct: 175 PYKKNPHDFVLWKPSKADEPSWPSPWGEGRPGWHIECSAMIEETLGLPIDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
PHHENEIAQ CA ++ A W+HNGFL ++ KMSKS GN + +++L+
Sbjct: 235 PHHENEIAQGVCAHGHAHGEEAHDEYARYWMHNGFLTVDAEKMSKSIGNVLLLHDLV--- 291
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------ 349
++ P V+R A+L HYR+P+D+ L ++ L + ++
Sbjct: 292 ----QAMPGEVVRWALLSAHYRQPLDWNQTLLEQSRKNLDRLYGALHRAAGVEAAEVEPP 347
Query: 350 -AVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKE 399
+ ++ +DLNT A+ AL L+ + + + A+A ILG+
Sbjct: 348 VEFMKSIEDDLNTPGAMAALFALSSDIERGMTAGDEGAVAEAKGRLIAAASILGVLQADP 407
Query: 400 H-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+++ + +E L+++R K ++ AD IR +L ++ D G +
Sbjct: 408 AEWFSGVDEGLKAEVEGLLEQRAAARTAKNWAEADRIRDRLNELNVVVMD------GPQG 461
Query: 455 TRWKQK 460
W+ K
Sbjct: 462 ATWRMK 467
>gi|158319520|ref|YP_001512027.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187629787|sp|A8MLB7|SYC_ALKOO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|158139719|gb|ABW18031.1| cysteinyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 464
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 172/488 (35%), Positives = 248/488 (50%), Gaps = 58/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF ++ +RMY CGPTVY++ HIGNAR +VFD L R L Y +
Sbjct: 1 MKLYNTLTRKKEEFIPLEEGKVRMYACGPTVYNYFHIGNARTFMVFDALRRYLIYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TD+DDKII RA +E A I+ + +++ D L P+
Sbjct: 60 -VTFVQNFTDVDDKIIRRANEEGV------APEEISERFIKEYFYDAGTLGIEKADIHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++ ++I + ++ GHAYE+N ++ FD S YG S++ +++ + G R+ +
Sbjct: 113 VTENMAEIIAFVAKLVEKGHAYESNGDVYFDVSKYEEYGKLSKQSLEDLQAGARIEINEY 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK + EP WESPWG GRPGWHIECSAM+ YLG+ DIHGGG DL+FPH
Sbjct: 173 KKNPLDFALWKSAKAGEPSWESPWGNGRPGWHIECSAMAKRYLGETIDIHGGGGDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS +K AN W+H G+LN++ +KMSKS NF T E+ +
Sbjct: 233 HENEIAQSEACSG-KKFANYWLHVGYLNVDNKKMSKSLNNFFTPREI-------SEEFDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
+R ML HYR PI+F+ L A+ L + + +
Sbjct: 285 ENLRFFMLSAHYRNPINFSRDLLEAAKNGLDRLYTGKNNLEYLLENAAEREVSEEEKNFI 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHI 391
+ A+ +D NT I + L RE + + +
Sbjct: 345 HGLQSFKNQFIDAVDDDFNTADGIAVIFDLVREINSHISEKNSKKAVEASYDLLMELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + + +L+ ER K K F+ +D IR L+ KG +LED
Sbjct: 405 LGLLKREAEDLEEEIE---RLIAERQQARKDKNFALSDKIRDDLKEKGIVLEDT------ 455
Query: 452 QRMTRWKQ 459
+ +W++
Sbjct: 456 AQGVKWRK 463
>gi|110799706|ref|YP_697116.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168211251|ref|ZP_02636876.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|122958668|sp|Q0TMM4|SYC_CLOP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110674353|gb|ABG83340.1| cysteinyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170710753|gb|EDT22935.1| cysteinyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 466
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 170/488 (34%), Positives = 244/488 (50%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL +K EF + P ++MYVCGPTVY+F HIGN R IVFD + R Y
Sbjct: 1 MIKVYNTLNKKKEEFIPLTPGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDK+I++A +E ++ I +++ +D L T P
Sbjct: 60 -KVDFVQNFTDIDDKMIKKANEEGTTV------KKIGDTYIKEYYQDADALNIERATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I ++I ++ ++ G+AYE + ++ F T YG S + I++ + G R+
Sbjct: 113 RATEFIGEIIKFVKGLVDKGYAYEVDGDVYFSTKKFEGYGKLSGQNIEDLQSGARISVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF +WK P EP W SPWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 RKKDPMDFAIWKAQKPGEPAWNSPWGMGRPGWHIECSCMAKKLLGETIDIHAGGSDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E A W+H+ F+N+ KMSKS NF T E+LE +
Sbjct: 233 HHENEIAQSEALTG-EPFARYWLHSAFVNVNNEKMSKSLNNFFTAREILER-------YD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A VIR ML HYR+ ++F+ L A+ + + + +
Sbjct: 285 ADVIRFLMLSAHYRQQLNFSEDLLESAKASVERIYNAIGNLENLIDEVSREEMNEEEKAY 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+ + +D NT AI A+ L +++ N L +
Sbjct: 345 LESLNKYKEKYIEKMDDDFNTADAITAIFDLIKDTNTNITIDSSKELAQKALELIRELGA 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LG+ ++ N+ IE L+ +R K + F+ AD IR +L+ +G +LED
Sbjct: 405 PLGM--FQKSTKGNLEEEIEALIAKRQQARKDRDFTLADKIRDELKDRGIVLEDT----- 457
Query: 451 GQRMTRWK 458
+ RWK
Sbjct: 458 -PQGVRWK 464
>gi|304388715|ref|ZP_07370773.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
gi|304337279|gb|EFM03455.1| cysteine--tRNA ligase [Neisseria meningitidis ATCC 13091]
Length = 699
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--L 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 573
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 574 MPSEADDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 633
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 634 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|229828827|ref|ZP_04454896.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
14600]
gi|229791990|gb|EEP28104.1| hypothetical protein GCWU000342_00910 [Shuttleworthia satelles DSM
14600]
Length = 468
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 255/485 (52%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL R+ EF I+P ++MYVCGPTVY++ HIGNARPMIVFD R + Y +
Sbjct: 1 MRIFNTLTRRKEEFVPIEPGKVKMYVCGPTVYNYIHIGNARPMIVFDTFRRYMEYRGYQ- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV N TD+DDKII++A++E S I+ + + KD L + PR
Sbjct: 60 -VTYVSNFTDVDDKIIKKAKEEGKDA------SEISERYIAECQKDMEALNVRPASVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPE 181
AT I +M++++ ++I G+AY + + + T + +YG S + I++ +
Sbjct: 113 ATREIGEMVHMVSDLIDKGYAYPVEDGTVYYKTRAFHSYGKLSHKNIEDLEGGHRDIKVT 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK EP W+SPW +GRPGWHIECS MS YLG DIH GG DLI
Sbjct: 173 GELKRDPLDFVLWKPKKEGEPYWDSPWCQGRPGWHIECSCMSKRYLGDTIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ +E A W+HNGFLN++ RKMSKS GNF T+ E+ +
Sbjct: 233 FPHHENEIAQSEAANGVE-FARYWMHNGFLNIDHRKMSKSLGNFFTVREVC-------QK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
+ V+R ML HYR P++F+ + A++ L + +
Sbjct: 285 YSGQVLRFFMLSAHYRSPLNFSADLMEAAKVSLERILTAGENLRFLAENARIDRMSEEER 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIF----NAS 388
A+ +D NT A+ A+ +L + + +L F +
Sbjct: 345 KILADSDQYMDKFNGAMDDDCNTADALAAIFELVKFINSRAAGQISRELADQFYQRLDTL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ G+ + + N+ I+ L++ER + K F+ AD IR L ++G +LED +
Sbjct: 405 TQVCGLIL--DQKEDNLDAEIDSLIEERQEARRQKDFARADRIRDDLLARGIVLEDTREG 462
Query: 449 DNGQR 453
R
Sbjct: 463 VKWHR 467
>gi|261364077|ref|ZP_05976960.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
gi|288568121|gb|EFC89681.1| cysteine--tRNA ligase [Neisseria mucosa ATCC 25996]
Length = 473
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 185/491 (37%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFTPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFSAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKVLGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + I+ L+ +R K ++ +D IR L ILED +
Sbjct: 408 RDPTEFLQGGAVSDGLSNEEIDDLIAQRKQARADKNWAESDRIRNLLNEHKIILEDNAD- 466
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 467 -----GTTWRR 472
>gi|226940330|ref|YP_002795404.1| Syc [Laribacter hongkongensis HLHK9]
gi|254781683|sp|C1D7F5|SYC_LARHH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226715257|gb|ACO74395.1| Syc [Laribacter hongkongensis HLHK9]
Length = 457
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 181/478 (37%), Positives = 257/478 (53%), Gaps = 44/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ FQ I P + MYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 1 MLHLYNTLSRQKERFQPIQPGKVNMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA + + I+++T + +D L P +P
Sbjct: 61 L--TYVRNITDIDDKIIRRAAENG------EPINVLTQRFIDAMDEDAAALGVQKPNFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +P MI +I+ +I G AY N ++ + YG S + +D+ + G RV
Sbjct: 113 RATQFVPDMISMIEELIGKGRAYAAPNGDVYYAVREFAGYGQLSGKSLDDLRAGERVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W SPWG+GRPGWHIECSAM+ HY G FDIHGGG DL F
Sbjct: 173 PNKRDPMDFVLWKAAKPGEPAWPSPWGQGRPGWHIECSAMNEHYFGPHFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE +
Sbjct: 233 PHHENEIAQSEGAHDCK-FVNYWMHNGFIRVDNEKMSKSLGNFFTIREVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAV 351
A V+R +L HYR P++++ L +A LS+
Sbjct: 285 DAEVVRFFILRAHYRSPLNYSDAHLEDARSALSRLYTALKNVPAADVALDWEANDYARRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL-------- 401
+A+ +D NTV A+ L +LA E+ K+ +L +LG+
Sbjct: 345 RAAMDDDFNTVEAVAVLFELAGEANKSRSAELAGWLKTLGGVLGLLQRDPVDFLQGGSLE 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + +E+L+ R K ++ +D IR +L ++G +LED G T W++
Sbjct: 405 GEISADEVEQLIAARKAARAGKDWAESDRIRDELIARGIVLED------GAGGTTWRR 456
>gi|323703779|ref|ZP_08115417.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323531248|gb|EGB21149.1| cysteinyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 493
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 178/510 (34%), Positives = 251/510 (49%), Gaps = 73/510 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
KK ++IYNTL + EF D ++ MYVCGPT Y+F H+GNARP++ FD + R Y
Sbjct: 5 KKVMEIYNTLTKTKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKG 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+N TD+DDKII RA++E + +K ++ D L L
Sbjct: 65 F--KVKYVQNFTDVDDKIINRAKEEGMD------PLALANKYINEYFVDADALNVLRADV 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+ + HI ++I LI+ + GHAY + ++ F S P YG S R +++ + G RV
Sbjct: 117 HPKVSEHIKEIIDLIKLLEQRGHAYAVDGDVYFAVRSFPEYGKLSGRNLEDMQAGARVEV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK + P EP WESPWG GRPGWHIECSAM+ YLG FDIHGGG DLI
Sbjct: 177 DVRKKDPMDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMAQKYLGYSFDIHGGGFDLI 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + + A W+HNGF+ + KMSKS GNF + E+L+
Sbjct: 237 FPHHENEIAQSEASCG-KPFARYWMHNGFITINQEKMSKSLGNFFLVREILD-------K 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
+P V+R +L THYR P+DF ++L A L +
Sbjct: 289 FPPDVVRWFLLSTHYRSPLDFDDEKLQVAGRGLERIKTAVRLLYEALDRPDSAGKEALDA 348
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHDL 381
+ A+ +D NT AI +L++E D
Sbjct: 349 ARFKGKLAALRSEFEQAMDDDFNTALAISVFFELSKEINILVGNLGGVVTPAARQLLADA 408
Query: 382 LPIFNASAHILGIEVCKE-----------HLNKNISIAIEKLVQERLILLKMKKFSSADY 430
+ ++LGI + +K + ++ +++ R K +++AD
Sbjct: 409 HALVKDFNYVLGILKEDQTSGRLLLEAPAKDDKLVDALVQLIIKIRQEARGKKDWATADA 468
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR L+ G ILED + RWK++
Sbjct: 469 IRDGLKELGIILEDT------PQGVRWKKQ 492
>gi|291613145|ref|YP_003523302.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
gi|291583257|gb|ADE10915.1| cysteinyl-tRNA synthetase [Sideroxydans lithotrophicus ES-1]
Length = 491
Score = 394 bits (1012), Expect = e-107, Method: Composition-based stats.
Identities = 181/512 (35%), Positives = 261/512 (50%), Gaps = 78/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R EF+ I P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+ +
Sbjct: 1 MLKIYNTLARDKQEFKPIIPNTVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + ++I +T + +D L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIKRAAENK------ESIHALTQRFIDAMHEDADTLGVQRPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++PQM+ ++ + +G AY+A + ++ + YG S + +++ + G RV
Sbjct: 113 RATQYVPQMLEMVAQLEQNGLAYQAADGDVNYAVRKFDGYGKLSGKSLEDLRAGERVEVV 172
Query: 183 YHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K +P DF+LWK + E W+S WG+GRPGWH+ECSAM+S LG FDIHGGG D
Sbjct: 173 SDKHDPLDFVLWKHAKDGEADEVKWDSKWGKGRPGWHLECSAMASDILGNHFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A R + N W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 LQFPHHENEIAQSEGAHRCQ-YVNYWMHNGFVRVDNEKMSKSLGNFFTIREVL------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
+ + A V+R +L HYR P++++ L +A+ L++
Sbjct: 285 KKYDAEVVRFFILRAHYRSPLNYSDVHLDDAKGALTRLYTALKSAPSSSILPPEGEGSEF 344
Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIF 385
SA+ +D NT AI L LA E ++
Sbjct: 345 PSPSGRGARGEGVIDWDTPHAARFKSAMDDDFNTPEAIAVLFDLANEVNRSQSVTAAAEL 404
Query: 386 NASAHILGIEVCKEHL------------------NKNISIAIEKLVQERLILLKMKKFSS 427
A +LG+ ++ I+ L++ R+ K K F+
Sbjct: 405 KTLAGVLGLLQRDPQDFLQGRASMNLTVPTPTLEASGGALDIDALIEARIAAKKSKNFAE 464
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AD IRK+L G +LED + T W++
Sbjct: 465 ADRIRKELLGAGIVLEDT------PQGTTWRR 490
>gi|257888689|ref|ZP_05668342.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257824743|gb|EEV51675.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,141,733]
Length = 470
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|257455309|ref|ZP_05620544.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447271|gb|EEV22279.1| cysteinyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 482
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 182/496 (36%), Positives = 257/496 (51%), Gaps = 61/496 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IY+++ + F ++ + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+
Sbjct: 8 MPITIYDSMSGQKRPFTPLEAGKVGMYVCGMTVYDYCHIGHARVMVGFDVVVRWLRHIGY 67
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRNITDIDDKII RA+ ++I +T + + +D L C P +
Sbjct: 68 D--VNYVRNITDIDDKIINRAKDNG------ESIYELTDRFIKAMHEDADNLGCERPNSE 119
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRV 179
P+AT+ IPQM +LIQ + AY+ A ++ + + YG S+R++ + + RV
Sbjct: 120 PKATDFIPQMQHLIQTLESKNLAYQGATGDVYYAVENFAEYGKLSKRRLADMQAGASERV 179
Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ KKNP DF+LWK + EP W+SPWG GRPGWHIECSAMS+ LG FDIHGG
Sbjct: 180 NVETDKKNPFDFVLWKSAKQTEPSETKWQSPWGVGRPGWHIECSAMSTCCLGDTFDIHGG 239
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + AN W+H GF+N++G KMSKS GNF TI +++
Sbjct: 240 GHDLQFPHHENEIAQSEGATG-KTYANNWMHVGFINVDGEKMSKSLGNFFTIRDVMG--- 295
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDP 349
+ IR +L +HYR P++F+ L EA+ L++ Q + G ID
Sbjct: 296 ----QFHPETIRFFILSSHYRSPVNFSDSALKEAQTSLTRLYQALKSVESLTEPAGEIDE 351
Query: 350 AVLSA-----LYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---------------A 389
+ +D N+ A+ L LARE K +L + +
Sbjct: 352 TPFETPFNQAMCDDFNSAGAVSVLFSLAREINKAVNLETVEGNAQALALATLLKDLAQPL 411
Query: 390 HILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+IL + IE ++ R K F+ AD IR L+++G LE
Sbjct: 412 NILQLNPTDFLQAKVGETTGLSDSEIEAFIEARKQAKADKDFAKADQIRSDLKAQGIELE 471
Query: 444 DYKNPDNGQRMTRWKQ 459
D KN T W++
Sbjct: 472 DGKN------GTTWRR 481
>gi|326937883|gb|AEA13779.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 465
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 253/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 NPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 AELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|161869111|ref|YP_001598277.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
gi|161594664|gb|ABX72324.1| cysteinyl-tRNA synthetase [Neisseria meningitidis 053442]
Length = 699
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 573
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 574 DLSENVNDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 633
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 634 RDPTEFLQGGAASDGLSNEEIEDLIARRKQARSDKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|328676393|gb|AEB27263.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida Fx1]
Length = 459
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 175/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 61 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKKGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + +
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKV 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458
>gi|309379306|emb|CBX22079.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 483
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 187/489 (38%), Positives = 255/489 (52%), Gaps = 58/489 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
YNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR +T
Sbjct: 15 YNTLTRQKEPFSPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PLT 72
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YVRNITDIDDKII RA + + I +T++ Q +D L L P +P+AT
Sbjct: 73 YVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKATE 126
Query: 128 HIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV K+
Sbjct: 127 NIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFKR 186
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+P DF+LWK + EP WESPWGRGRPGWHIECSAMS + G FDIHGGG DL FPHHE
Sbjct: 187 DPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGNTFDIHGGGADLQFPHHE 246
Query: 247 NEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
NEIAQS A W+HNGF+ ++G KMSKS GNF TI E+
Sbjct: 247 NEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIREV 306
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 307 L-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADPMP 359
Query: 352 LS-----------ALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK 398
A+ +D +TV A+ L +LA E K N L A I+G+
Sbjct: 360 SEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNNAQLAGRLKALGGIIGLLQRD 419
Query: 399 EHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 420 PTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDT----- 474
Query: 451 GQRMTRWKQ 459
T W++
Sbjct: 475 -AGGTTWRR 482
>gi|225574357|ref|ZP_03782967.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
10507]
gi|225038413|gb|EEG48659.1| hypothetical protein RUMHYD_02424 [Blautia hydrogenotrophica DSM
10507]
Length = 484
Score = 394 bits (1011), Expect = e-107, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 252/488 (51%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+KIYNTL ++ EF ++ ++MYVCGPTVY+ HIGNARPMIVFD R + Y
Sbjct: 14 KMKIYNTLSKRKEEFIPLEEGRVKMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYKGY- 72
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII +A +E + I+ + ++ KD + T P
Sbjct: 73 -KVNFVSNFTDVDDKIIAKANEEGVTA------DEISKRYIEECKKDMEGMNVRPATTHP 125
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---RV 179
AT I M+ +IQ +I G AY A+ + F YG S + +D+ + G +V
Sbjct: 126 LATEEIEGMVEMIQTLIDKGFAYPVADGTVYFRVKKFKEYGKLSHKNLDDLQSGFRALQV 185
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K++P DF+LWK EP W SPW GRPGWHIECS MS YLG+ DIH GG D
Sbjct: 186 SGEEQKEDPLDFVLWKPRKEGEPAWPSPWCEGRPGWHIECSVMSKKYLGEEIDIHAGGED 245
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS C + + A W+HNGFLN++ +KMSKS GNF T+ E+ E
Sbjct: 246 LIFPHHENEIAQSECCNG-KVFARYWMHNGFLNIDNKKMSKSLGNFFTVREIAE------ 298
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
+ V+R ML HYR P++F+ + ++ L +
Sbjct: 299 -QYDLQVLRFFMLNAHYRSPLNFSRDLMEASKNSLERILNGAERLRFLADGAKKIEISPQ 357
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIF 385
+ +K I A+ +D NT A+ A+ +L + + ++ I
Sbjct: 358 EQESLNEAKKIYVSKFEEAMDDDFNTADALAAVFELVKFANTQINEESSKGYVVEVYAIL 417
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LG+ + KE + + IE+L+ ER KMK F+ AD IR QL + G ILED
Sbjct: 418 KQLCDVLGLIIEKEK--EVLDEDIERLIAERQAARKMKNFAKADEIRDQLTNMGIILEDT 475
Query: 446 KNPDNGQR 453
+ +R
Sbjct: 476 REGVKWKR 483
>gi|239636927|ref|ZP_04677925.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
gi|239597475|gb|EEQ79974.1| cysteinyl-tRNA synthetase [Staphylococcus warneri L37603]
Length = 466
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 172/482 (35%), Positives = 259/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VVYVSNFTDVDDKLIKRSKE------LNESVPEIADKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE+N ++ F T +YG S + ID+ K+G R+
Sbjct: 113 RVMNHMDEIIDFIKKLVDEGYAYESNGDVYFRTRQFKDYGKLSHQSIDDLKVGARIEAGD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
V+R M+ HYR PI++ ++ ++ A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVSAAKSGLERIRNSYQLIEEREAIATDIDNQEEYINQ 344
Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + + ++ + +L
Sbjct: 345 IDQILENFETVMDDDFNTANAVTAWYDLAKLANRYVLENVTSTNVIAKFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGNQQDDLLDEEIEKLIEERNEARKNKDFARADEIRDHLKEQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|253681484|ref|ZP_04862281.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
gi|253561196|gb|EES90648.1| cysteine--tRNA ligase [Clostridium botulinum D str. 1873]
Length = 466
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 165/487 (33%), Positives = 255/487 (52%), Gaps = 53/487 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NT+ R+ EF+ I + MYVCGPTVY++ HIGN R +VFD + R Y
Sbjct: 1 MKLFNTMTRQKEEFKPIKDGEVSMYVCGPTVYNYFHIGNGRTFLVFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I++A +E N + + + ++ KD L T PR
Sbjct: 59 KVNFIQNFTDIDDKMIKKANEE------NVTVKELGDRFINEYYKDADGLNIKRATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I ++++I G+AYE + ++ F T YG S + +D+ + G R+
Sbjct: 113 ATEFMDEIISFVKDLIDKGYAYEVDGDVYFSTKKFAEYGKLSGQNLDDLQAGARITVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK P EP WESPWG+GRPGWHIECS M+ LG DIH GG DL+FPH
Sbjct: 173 KQDPMDFAIWKNEKPGEPSWESPWGKGRPGWHIECSCMAHKLLGDTIDIHAGGADLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + + AN W+H+ +LN+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARNG-KDFANYWMHSAYLNINNKKMSKSLNNFFTTREILER-------YDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
VIRL ML HYR P++F+ + L A+ + + +
Sbjct: 285 EVIRLFMLSAHYRTPLNFSDELLESAKASNERLYNSIGNLERLLDEVKIEEMTGVEKEYI 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHI---LG-- 393
+ + +D NT AI + L +E + + N S + LG
Sbjct: 345 KVLNSYKEKYIEKMDDDFNTADAIAVIFDLIKEINTHVNTDSSKELVNYSLELIRELGMP 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++ +++ IE L+++R K + ++ AD IR L+++G +LED +
Sbjct: 405 LGILQKSTIVDLNAEIEGLIEQRQKARKDRDWALADKIRDDLKARGIVLEDT------AQ 458
Query: 454 MTRWKQK 460
RWK++
Sbjct: 459 GVRWKKE 465
>gi|329729466|gb|EGG65869.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU144]
Length = 466
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 168/482 (34%), Positives = 259/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TS 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIATDLEEQSEYIQQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + +++ + +L
Sbjct: 345 IDKILNQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+L++ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|218134243|ref|ZP_03463047.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
43243]
gi|217991618|gb|EEC57624.1| hypothetical protein BACPEC_02135 [Bacteroides pectinophilus ATCC
43243]
Length = 474
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 182/494 (36%), Positives = 254/494 (51%), Gaps = 60/494 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +KIYNTL K EF ++ ++MYVCGPTVY+ HIGNARPMIVFD + R L Y
Sbjct: 4 KTNMKIYNTLTAKKEEFVPLEEGKVKMYVCGPTVYNLIHIGNARPMIVFDTVRRYLEYKG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDKII+ A +E + + I+++ + KD + T
Sbjct: 64 YE--VNYVSNFTDVDDKIIKAANEEGVTADV------ISTRYIAECKKDMAGMNVKPATK 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR--- 178
P AT I MI LIQ +I G+AY N + + T YG S++ ID+ + G R
Sbjct: 116 HPLATEEIDGMIELIQTLIDKGYAYNVNGTVYYRTRKFKGYGKLSKKNIDDLEAGHRDIK 175
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K++P DF+LWK EP WESPW GRPGWH ECS M+ YLG+ DIH GG
Sbjct: 176 VAGGEEKEDPLDFVLWKPKKEGEPYWESPWSEGRPGWHTECSVMAKKYLGESIDIHAGGE 235
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A+ ++ + W+HN FL + KMSKS GNF T+ ++
Sbjct: 236 DLIFPHHENEIAQSEAANGVQ-FSKYWMHNAFLKINNVKMSKSLGNFFTVRDI------- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
+ V+R ML HYR P++F+ + + A+ L + + +
Sbjct: 288 AAKYDLQVLRFFMLSAHYRNPLNFSEELMESAKNSLERITTAAGNLNHMIDNAQDREVSE 347
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
+ +A+ +D NT AI A+ + + + + D+L
Sbjct: 348 EEKNILAQLDGMIKQFENAMDDDFNTADAITAIFDMVKLANTSCKSSDSKKFLQDVLDKI 407
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ ILG+EV E + + I+ L+QER K + F+ AD IR+ L KG +LED
Sbjct: 408 AGTCGILGLEVVSEK--ELLDEDIDNLIQERQQARKDRNFARADEIRQLLLDKGIVLEDT 465
Query: 446 KNPDNGQRMTRWKQ 459
+ RWK+
Sbjct: 466 R------EGVRWKR 473
>gi|27467210|ref|NP_763847.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57866107|ref|YP_187766.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242241861|ref|ZP_04796306.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|30316150|sp|Q8CTU1|SYC_STAES RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216111|sp|Q5HRM3|SYC_STAEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|27314752|gb|AAO03889.1|AE016744_292 cysteinyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57636765|gb|AAW53553.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|242234639|gb|EES36951.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis W23144]
Length = 466
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 168/482 (34%), Positives = 259/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TS 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + +++ + +L
Sbjct: 345 IDKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+L++ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|254373761|ref|ZP_04989244.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
gi|290954116|ref|ZP_06558737.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|151571482|gb|EDN37136.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3548]
Length = 459
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 61 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458
>gi|325127358|gb|EGC50293.1| cysteinyl-tRNA synthetase [Neisseria meningitidis N1568]
Length = 473
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGKLTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|227552721|ref|ZP_03982770.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
gi|257897353|ref|ZP_05677006.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
gi|227178121|gb|EEI59093.1| cysteine--tRNA ligase [Enterococcus faecium TX1330]
gi|257833918|gb|EEV60339.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com12]
Length = 470
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGIAAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKITLLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|85858183|ref|YP_460385.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721274|gb|ABC76217.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 550
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 193/515 (37%), Positives = 244/515 (47%), Gaps = 80/515 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL K F I + +YVCG TVYD H+G+AR +VFDVL R L Y
Sbjct: 57 MSLKLYNTLNNKKEVFTPIREGRVGLYVCGITVYDVCHVGHARSAVVFDVLKRYLEYRGY 116
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY++N TD+DDKII RA E S IS I ++ KD RL L PT
Sbjct: 117 E--VTYIKNFTDVDDKIIARANAEGVS------ISEIANRYIASHDKDMDRLGVLRPTVT 168
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI LI + G AY + + + P YG S RK+++ G R+
Sbjct: 169 PRATEHIGEMIELISKLQKRGLAYAVDGNVYYAVERFPGYGKLSGRKLEDMMAGARIDVN 228
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK NP DF LWK S P EP W+SPWG GRPGWHIECS MS YLG FDIHGGG DL+F
Sbjct: 229 EHKNNPMDFALWKASKPNEPAWDSPWGPGRPGWHIECSVMSQKYLGDTFDIHGGGEDLVF 288
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + ANIWIHNGF+ + KMSKS GN TI E+L +
Sbjct: 289 PHHENEIAQSEGVTG-KPLANIWIHNGFVKINSEKMSKSLGNVFTIQEMLTR-------Y 340
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
A VIRL ML +HYR +DF+ + L+EA + ++ T
Sbjct: 341 HAEVIRLFMLQSHYRSAVDFSEESLSEARQGMDRFYGTLKAIQEVLAVAEEEASPISPET 400
Query: 341 --------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------- 384
+ + A+ +DLNT AI L AR+ +
Sbjct: 401 LTGKTAELYAHVQGLPDRFVEAMDDDLNTARAIGYLFDAARQINGFIRDAKMAKSKEGWK 460
Query: 385 --------FNASAHILGIEVCKEH------------LNKNISIAIEKLVQERLILLKMKK 424
++LG+ IE L+ +R K
Sbjct: 461 VLALAGKSIKDLGYVLGLFQENPDVYFLQDREREIRKRGLEPAEIELLIADRWAARNDKD 520
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ AD IR+ L KG +L+D T WK
Sbjct: 521 WHKADEIRQLLTEKGIVLKDTPT------GTTWKV 549
>gi|209964298|ref|YP_002297213.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
gi|226710848|sp|B6ISG4|SYC_RHOCS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|209957764|gb|ACI98400.1| cysteinyl-tRNA synthetase CysS [Rhodospirillum centenum SW]
Length = 456
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 217/476 (45%), Positives = 282/476 (59%), Gaps = 40/476 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R F IDPSN+R+YVCGPTVYD+AH+GNAR FD+L RLL++ Y
Sbjct: 1 MALTLYNTLTRSEEAFTPIDPSNVRLYVCGPTVYDYAHVGNARTFSAFDLLARLLKHLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTY RNITD+DDKII+R+++ + I +T++ T QF D L L P +
Sbjct: 60 -PRVTYARNITDVDDKIIDRSQRSG------EPIDGVTARTTAQFHADMDALGLLRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIPQMI +I ++ G AY A ++F ++P+YG SRR DE G RV
Sbjct: 113 PRATTHIPQMIAMIGRLVEQGFAYAAEGHVLFHVPAMPDYGRLSRRSQDELIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK + P EPGW+SPWG GRPGWHIECSAM++ +LG VFDIHGGGLDLIF
Sbjct: 173 PYKRSPADFVLWKPAKPGEPGWDSPWGTGRPGWHIECSAMTAAHLGAVFDIHGGGLDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA AN+W+H+GFL + G KMSKS GNF T+ ELL+ +
Sbjct: 233 PHHENEIAQSRCAHGTAVMANVWMHSGFLTIAGDKMSKSLGNFYTVRELLD-------EF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
P IRLA+L HYR+P+DFT +++ +A+ L +W + VL+AL +
Sbjct: 286 PGEAIRLALLSAHYRQPLDFTKEKIAQAKQALDRWYGVLRGLEEVRAAEVPFDVLAALED 345
Query: 358 DLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHL---------NK 403
DLNT AI LH+LA K L A+A +LG +
Sbjct: 346 DLNTPLAISHLHELATAFHKADAAARPGLAGRLKAAAGLLGFLRQDPDAWFRGTPKGTDG 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AIE +Q R K K F+ AD IR L +G +LED G + T WK+
Sbjct: 406 LDEAAIEAAIQARKEARKAKDFAEADRIRAALLEQGIVLED------GPQGTSWKR 455
>gi|319409608|emb|CBY89907.1| cysteinyl-tRNA synthetase (cysteine-tRNA ligase; CysRS) [Neisseria
meningitidis WUE 2594]
Length = 699
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 187/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 229 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 286
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 287 LTYVRNITDIDDKIIARAAENG------ETIGKLTARFIQAMHEDADALGVLRPDIEPKA 340
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 341 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 400
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 401 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 460
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 461 HENEIAQSVGATGHTCGHHHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 520
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
E+L + + V+R +L HYR P++++ L +A+ L++ T + DP
Sbjct: 521 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPPADP 573
Query: 350 AVLS-----------ALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
A+ +D +TV A+ L +LA E K +D L A I+G+
Sbjct: 574 MPSEAGDDYTRRFYVAMNDDFDTVKAVAVLFELAGEVNKTNDAQLAGRLKALGGIIGLLQ 633
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 634 RDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 690
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 691 ---AGGTTWRR 698
>gi|225387932|ref|ZP_03757696.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
DSM 15981]
gi|225045975|gb|EEG56221.1| hypothetical protein CLOSTASPAR_01704 [Clostridium asparagiforme
DSM 15981]
Length = 469
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 181/487 (37%), Positives = 252/487 (51%), Gaps = 55/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF + P ++MYVCGPTVY+F HIGNARPMIVFD + R Y E
Sbjct: 1 MKIFNTLSRRKEEFVPLTPGVVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E I+ + ++ KD + T P
Sbjct: 60 -VQYVSNFTDVDDKIIKKAIEEGVDA------DTISKRYIEECKKDMASMNVKPATVHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +I +I GHAY A+ + F T S YG S + +++ + G R V
Sbjct: 113 ATEEICGMLDMIGTLIEKGHAYAAADGTVYFRTGSFKEYGKLSHKNLEDLQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++PADF+LWK EP WESPW +GRPGWHIECS MS YLG+ DIH GG DL
Sbjct: 173 GEEGKEDPADFVLWKPKKDGEPFWESPWCQGRPGWHIECSVMSKKYLGEQIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A+ + A W+HN FLN++ RKMSKS GNF T+ E+ G
Sbjct: 233 IFPHHENEIAQSESAND-KPFATYWMHNAFLNIDNRKMSKSLGNFFTVREI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
+ V+R ML HYR P++F+ + ++ L + ++
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERIITCMEKLRDLESKARGNAETCDE 344
Query: 350 ------------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
+A+ +D NT AI A+ +L + + D L +
Sbjct: 345 QNNMAQADGLRGKYEAAMDDDFNTADAISAVFELVKLANSTADADSTARYVSYLKDMIQE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + +E+L+ R K K F+ AD IR +L G +LED +
Sbjct: 405 LCDVLGIIT--ERKAETLDSQVEELIAARQQARKEKNFALADEIRGRLLDMGIVLEDTRE 462
Query: 448 PDNGQRM 454
+R+
Sbjct: 463 GVKWKRV 469
>gi|33152217|ref|NP_873570.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
gi|38372510|sp|Q7VMA0|SYC_HAEDU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33148439|gb|AAP95959.1| cysteinyl-tRNA synthetase [Haemophilus ducreyi 35000HP]
Length = 459
Score = 393 bits (1010), Expect = e-107, Method: Composition-based stats.
Identities = 186/480 (38%), Positives = 266/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL+R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLKREKEEFKPINPAQVGMYVCGVTVYDLCHFGHGRTFVSFDVIARYLRYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N++ + + + D L + P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NESCEALVERMIAEMHNDFDALNIMRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I +++ +I++GHAY A+ +++FD +S YG+ SR+ +D+ + G RV K
Sbjct: 113 RATEHIAEIIAMVEKLIMNGHAYVAADGDVMFDVTSFNQYGALSRQNLDQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWKRS EP W SPWG GRPGWHIECSAM++ LG+ FDIHGGG DL+F
Sbjct: 173 SAKKNPMDFVLWKRSKENEPSWLSPWGNGRPGWHIECSAMNNKELGEHFDIHGGGADLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + E N W+H G L ++ KMSKS GNF +I +L +
Sbjct: 233 PHHENEIAQSCCAHQGE-YVNYWLHTGMLTIDKEKMSKSVGNFFSIRHMLGL-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R L HYR +D++ L A L + A +
Sbjct: 285 DAESLRYFFLTAHYRSLLDYSTDNLDLARSALERLYTALRGCDLSVQANGGENYVTAFKT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIE------VCKE 399
A+ +D NT +A+ L ++ARE K + L A +LG+ K
Sbjct: 345 AMDDDFNTPAALAVLFEMAREVNKLKTEDQQQANALAVCLKELAAVLGLLTQDPDNFLKG 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+N + + IE L+Q+R K ++ AD +R +L++ +LED T W++
Sbjct: 405 EVNIDQTAEIEALIQQRNQAKANKNWAVADQVRGKLKAMNILLEDTPT------GTVWRK 458
>gi|319399722|gb|EFV87971.1| cysteinyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
Length = 466
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 167/482 (34%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TS 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREEIATDLEEQSEYIQQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + +++ + +L
Sbjct: 345 IDKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+L++ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|296313701|ref|ZP_06863642.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
gi|296839719|gb|EFH23657.1| cysteine--tRNA ligase [Neisseria polysaccharea ATCC 43768]
Length = 475
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 187/496 (37%), Positives = 255/496 (51%), Gaps = 59/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MNMT-TIYNTLTRQKEPFTPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P
Sbjct: 60 GY--PLTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDANALGVLRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+AT +IPQMI +I+ +I + AY AN ++ + YG S + +D+ + G RV
Sbjct: 112 IEPKATENIPQMIAMIETLIQNSKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + LG FDIHGGG D
Sbjct: 172 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLLGDTFDIHGGGAD 231
Query: 240 LIFPHHENEIAQSCCADRIE---------------KTANIWIHNGFLNLEGRKMSKSNGN 284
L FPHHENEIAQS A W+HNGF+ ++G KMSKS GN
Sbjct: 232 LQFPHHENEIAQSVGASGHSCGHNHAQTHYGQSIASHVKYWLHNGFIRVDGEKMSKSLGN 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
F TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 292 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 344
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
S + +A+ +D TV A+ L +LA E K +D L A I
Sbjct: 345 PAAAFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 404
Query: 392 LGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+G+ + + I+ L+ R K + +D IR L ILE
Sbjct: 405 IGLLQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWVESDRIRDLLNEHKIILE 464
Query: 444 DYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 465 DN------AGGTTWRR 474
>gi|319946262|ref|ZP_08020502.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
gi|319747644|gb|EFV99897.1| cysteine--tRNA ligase [Streptococcus australis ATCC 700641]
Length = 450
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 167/469 (35%), Positives = 238/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMSRDLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D T L T
Sbjct: 61 GYE--VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RHPRVVEFMDDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + P E WESPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEVSWESPWGPGRPGWHIECSVMSTGILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSA- 354
++ V+R HYR+PI+FT + R E + K G +DPA L +
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQSF 344
Query: 355 -------LYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
+ D+N + I + +LA+ + D+ + GI +E
Sbjct: 345 VDKFVAAMDEDINAANGITVVFELAKWINSGHYDQDVKEALAKMLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ IE L+ ER K F+ AD IR QL ++G L D K R
Sbjct: 401 LAADIEALIAERQEARANKDFARADEIRDQLAAQGIKLLDTKEGVRWTR 449
>gi|118496920|ref|YP_897970.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
U112]
gi|187629823|sp|A0Q4Q1|SYC_FRATN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118422826|gb|ABK89216.1| cysteinyl-tRNA synthetase [Francisella novicida U112]
Length = 459
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 61 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 407 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458
>gi|229825688|ref|ZP_04451757.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
49176]
gi|229790251|gb|EEP26365.1| hypothetical protein GCWU000182_01051 [Abiotrophia defectiva ATCC
49176]
Length = 465
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 184/482 (38%), Positives = 253/482 (52%), Gaps = 51/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF ++P ++MYVCGPTVY+F HIGNARP+I+FD + R Y +
Sbjct: 1 MKIHNTLTNKEEEFIPLEPGKVKMYVCGPTVYNFMHIGNARPIIIFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+RA +E S I+ + + D L L T P+
Sbjct: 60 -VNYVSNFTDVDDKIIKRANEEGVSST------EISERYIIEAKTDMEGLNVLPATKNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI +I+ +I GHAY N + F T S YG S + ID+ + G R+
Sbjct: 113 ATEEIDGMIEMIEELIKKGHAYAKNGSVYFRTRSFEEYGKLSNKNIDDLEAGARIAVNDE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK EP W SPWG GRPGWHIECS MS YLG+ DIH GG DLIFPH
Sbjct: 173 KEDPLDFVLWKPKKEGEPFWVSPWGEGRPGWHIECSVMSKKYLGEQIDIHAGGEDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A+ + A W+HNG+L + KMSKS GNFITI ++ + +
Sbjct: 233 HENEIAQSEAAND-KDFAKYWMHNGYLRINNEKMSKSLGNFITIRDV-------SKEYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
V+R ML HYR PI+F+ + + A+ L + +
Sbjct: 285 GVLRFFMLGAHYRGPINFSHELMEAAKTGLERITNAVANLDFLLESANDRSLTEAEKEVL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
+A+ D NT A+ A+ L + + ++ + + +
Sbjct: 345 DKALAYKADFEAAMDADFNTADAVTAVFNLVKLANSEINTESSSELIKEVRGLIVILSDV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG++V KE + + IE L++ER K K F+ AD IR+ L SKG +LED +
Sbjct: 405 LGVKVVKEK--EILDEEIEALIKERTEARKSKNFARADEIREILTSKGIVLEDTREGVKW 462
Query: 452 QR 453
+R
Sbjct: 463 KR 464
>gi|89256953|ref|YP_514315.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115315315|ref|YP_764038.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
OSU18]
gi|134301406|ref|YP_001121374.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156503147|ref|YP_001429212.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|167010049|ref|ZP_02274980.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC200]
gi|254368215|ref|ZP_04984235.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|254372282|ref|ZP_04987773.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
GA99-3549]
gi|295312486|ref|ZP_06803255.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
URFT1]
gi|109894902|sp|Q2A1T7|SYC_FRATH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|122324692|sp|Q0BKI3|SYC_FRATO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629822|sp|A7NE53|SYC_FRATF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629824|sp|A4IWF2|SYC_FRATW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|89144784|emb|CAJ80122.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
LVS]
gi|115130214|gb|ABI83401.1| cysteine--tRNA ligase [Francisella tularensis subsp. holarctica
OSU18]
gi|134049183|gb|ABO46254.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
WY96-3418]
gi|134254025|gb|EBA53119.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
257]
gi|151570011|gb|EDN35665.1| cysteinyl-tRNA synthetase [Francisella novicida GA99-3549]
gi|156253750|gb|ABU62256.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FTNF002-00]
Length = 464
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 66 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463
>gi|314932753|ref|ZP_07840122.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
gi|313654434|gb|EFS18187.1| cysteine--tRNA ligase [Staphylococcus caprae C87]
Length = 466
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 172/482 (35%), Positives = 260/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W+SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
V+R M+ HYR PI++ ++ + A L + + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQ 344
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
+ + +D NT +A+ A + LA+ + K H ++ + +L
Sbjct: 345 IETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + E+ N+ + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGENENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|254369813|ref|ZP_04985823.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
gi|157122772|gb|EDO66901.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. holarctica
FSC022]
Length = 464
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 252/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 66 TLVRNITDIDDKIIKRANENG------ESTTELVERNIRAMHDVFARLNILKPSKEPRAT 119
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDNASEYEEKFIKA 351
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463
>gi|254804107|ref|YP_003082328.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
gi|254667649|emb|CBA03462.1| Cysteinyl-tRNA synthetase [Neisseria meningitidis alpha14]
Length = 475
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 187/496 (37%), Positives = 256/496 (51%), Gaps = 59/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MNMT-TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P
Sbjct: 60 GY--PLTYVRNITDIDDKIIARAAENG------ETIGKLTARFIQAMHEDADALGVLRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 112 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG D
Sbjct: 172 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 231
Query: 240 LIFPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGN 284
L FPHHENEIAQS A W+HNGF+ ++G KMSKS GN
Sbjct: 232 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGN 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
F TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 292 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 344
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
S + +A+ +D TV A+ L +LA E K +D L A I
Sbjct: 345 PAAEFGLSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 404
Query: 392 LGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+G+ + + I+ L+ R K ++ +D IR L ILE
Sbjct: 405 IGLLQRDPIEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILE 464
Query: 444 DYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 465 DN------AGGTTWRR 474
>gi|73663535|ref|YP_302316.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|109894949|sp|Q49V39|SYC_STAS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|72496050|dbj|BAE19371.1| cysteinyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 466
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 166/482 (34%), Positives = 260/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDK+I+R+++ +++++ I + F +D L T P
Sbjct: 61 --VVFVSNFTDVDDKLIKRSKE------LDESVETIADRYIDAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ +I I++++ G+AYE+ ++ F T +YG S + +++ K+G R+ +
Sbjct: 113 RVMNHMDDIINFIKDLVDEGYAYESGGDVYFRTRKFQDYGKLSHQSLNDLKVGARIEQGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKQAKPGEISWESPFGEGRPGWHIECSVMAYHELGATIDIHAGGTDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNF+ +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFVLVHDII-------KQID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
V+R M+ HYR PI++ ++ + A+ L + + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNMELVEAAKSGLERVRNSYQAIEEREAIATDIEAQSDYIAE 344
Query: 347 ---IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDKILEQFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTKVLGRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + ++ + +E L++ER K K F+ AD IR QL+ + ILED +
Sbjct: 405 GVPLKGKDSDELLDEEVEALIEERNNARKDKDFARADEIRDQLKEQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|293572688|ref|ZP_06683656.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
gi|291607274|gb|EFF36628.1| cysteinyl-tRNA synthetase [Enterococcus faecium E980]
Length = 470
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|257899915|ref|ZP_05679568.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
gi|257837827|gb|EEV62901.1| cysteinyl-tRNA synthetase [Enterococcus faecium Com15]
Length = 470
Score = 393 bits (1009), Expect = e-107, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -QNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPEVSATVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|293367905|ref|ZP_06614543.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|291317934|gb|EFE58342.1| cysteine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329738050|gb|EGG74271.1| cysteine--tRNA ligase [Staphylococcus epidermidis VCU045]
Length = 466
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 168/482 (34%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYDDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMHHMGEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWNSPFGKGRPGWHIECSVMAYHELGSTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------TS 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREQIASDLEEQSEYIQQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + LA+ + K + +++ + +L
Sbjct: 345 IDKILNQFETVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLNRFKEVYSIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+L++ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKSKETEELLDEDIEQLIEERNEARKNKDFARADEIRDMLKARHIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|310659543|ref|YP_003937264.1| cysteinyl-tRNA synthetase [Clostridium sticklandii DSM 519]
gi|308826321|emb|CBH22359.1| cysteinyl-tRNA synthetase [Clostridium sticklandii]
Length = 466
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 183/487 (37%), Positives = 265/487 (54%), Gaps = 55/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ F ++ + I+MYVCGPTVY+F HIGNARP ++FD + Y E
Sbjct: 1 MKIYNTLTRQKETFIPLEENKIKMYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N TD+DDKII+RA +E S + K ++ KD L T PR
Sbjct: 60 -VTYVQNFTDVDDKIIKRANEEGIS------PIEVAEKYIAEYFKDADALGIKRATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +I +I I+++I G AYE N ++ F++ + YG S++ ++E +G R+
Sbjct: 113 VTENIENIITFIEDLISKGFAYELNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK E GW+SPWG GRPGWHIECS MS+ YLG DIH GG DLIFPH
Sbjct: 173 KKHPIDFALWKAKKEGEIGWQSPWGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+HNG++N++ +KMSKS GNF T+ ++L +
Sbjct: 233 HENEIAQSEARSG-KQFARYWMHNGYINVDNQKMSKSLGNFFTVRDILS-------EFSG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
VIR +L HYR P++F+ + + +A+ + + +
Sbjct: 285 QVIRFFLLSAHYRNPVNFSKELILQAKAGMERLANSKERLVFTISHAKGQMNESELELVS 344
Query: 345 --GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHIL 392
+ A+ +D+NT AI + +LAR S N L +FN +L
Sbjct: 345 ALENHRDRFIEAMDDDINTADAISIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
I + E + N + IEKL+++R+ K K F+ AD IR +L+S G +ED +
Sbjct: 405 NI-IKAEDTDSNDNEQIEKLIKDRVEAKKNKDFALADAIRDELKSMGIEIEDTR------ 457
Query: 453 RMTRWKQ 459
+ T+WK+
Sbjct: 458 QGTKWKK 464
>gi|293553639|ref|ZP_06674263.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
gi|291602214|gb|EFF32442.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1039]
Length = 470
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 252/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGRVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|194324147|ref|ZP_03057921.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
FTE]
gi|194321594|gb|EDX19078.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. novicida
FTE]
Length = 464
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 66 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 412 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463
>gi|312898320|ref|ZP_07757710.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620239|gb|EFQ03809.1| cysteinyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 482
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 165/503 (32%), Positives = 253/503 (50%), Gaps = 65/503 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++ +YNTL RK F+ + P ++MYVCG T Y+ +H+GNARP + +DV+ R L++
Sbjct: 1 MMRELTVYNTLSRKKEAFKPVTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLKHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VT+++N TD+DDKII A E S I ++ + + +L
Sbjct: 61 GY--AVTHIQNFTDVDDKIINAANGEEVS------WDTIANRYIASYFEVMDKLHIQRAD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + H+ +I +I +I +GHAYE + ++ + S +YG S R +D+ G R+
Sbjct: 113 KYPRVSEHMDDIIAMISKLIENGHAYELDGDVYYRVQSFEHYGELSHRSLDDMMAGARIE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + P EP W+SPWG+GRPGWHIECSAMS YLG+ FD HGGG DL
Sbjct: 173 VDDRKENPMDFALWKAAKPSEPSWDSPWGKGRPGWHIECSAMSLKYLGEPFDFHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ+ N W+HNGF+ ++ KMSKS NF + ++LE
Sbjct: 233 IFPHHENEIAQTEACCNHGPMVNYWVHNGFITIDSEKMSKSLNNFFLVKDVLE------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------- 343
+ +R ++ HYR P+DF+ +RLTE L + +
Sbjct: 286 HYSPDALRYFLISNHYRSPLDFSDERLTEMTRSLERLGTAIDNTLWLLEQPSGGKSELSA 345
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLL 382
+A+ +D NT A A+ +LA++ ++
Sbjct: 346 ALLADAQRTMEDFETAMCDDFNTALASAAMFELAKKVNIYTSEVSTNGVPADSAVLSEVK 405
Query: 383 PIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
IF ILG+ + + +K+ + ++ +++ R K+++ AD IR +L
Sbjct: 406 RIFKTMTDILGVLEDRWNGTAGKADDKDYAALMDVILELRQECRAQKQYALADAIRDKLS 465
Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
G +ED + RWK+
Sbjct: 466 DLGITIEDS------PQGARWKK 482
>gi|331003582|ref|ZP_08327079.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
gi|330412423|gb|EGG91814.1| cysteinyl-tRNA synthetase [Lachnospiraceae oral taxon 107 str.
F0167]
Length = 469
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 176/484 (36%), Positives = 248/484 (51%), Gaps = 51/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL RK EF I+ ++MYVCGPTVY+ HIGNARPMI FD + R Y +
Sbjct: 1 MKIFNTLSRKKEEFVPIEEGKVKMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E + I+++ + KD + L T P
Sbjct: 60 -VNYVSNFTDVDDKIINKAIEEGVEASV------ISTRYIDECKKDMEAMNVLPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M +I ++I GHAY + + F S +YG S + IDE + G R V
Sbjct: 113 ATEEIDGMEEMIGSLIEKGHAYVAKDGTVYFRVKSFEDYGKLSHKNIDELQSGFREIKVK 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++ DF+LWK EP W+SPW +GRPGWHIECS MS YLG DIHGGG DL
Sbjct: 173 GEEDKEDSNDFVLWKPKKDGEPYWDSPWSKGRPGWHIECSVMSKKYLGDQIDIHGGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A + AN W+HN FLN++ +KMSKS GNF T+ ++
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSLGNFFTVRDI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
+ V+R ML HYR P++F+ + + ++ L + + +
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEASKNSLERILTGVENIKDVQKRNNADAITDAE 344
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
+ A+ +D NT AI A+ +L + S + + + +L I +
Sbjct: 345 LSNLEIAKVLKDKFVIAMDDDFNTADAITAIFELIKLSNTSLNEKSTVEYANGLLNIILP 404
Query: 398 K--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
E + + IE L+++R K K F+ AD IR +L G +LED +
Sbjct: 405 LCDTLGIITERKVEILDSEIEDLIEQRTSARKNKDFALADKIRNELLEMGIVLEDTREGV 464
Query: 450 NGQR 453
+R
Sbjct: 465 KWKR 468
>gi|321313765|ref|YP_004206052.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|320020039|gb|ADV95025.1| cysteinyl-tRNA synthetase [Bacillus subtilis BSn5]
Length = 466
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 162/489 (33%), Positives = 251/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I+ + + + +D + L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVSALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + ++ G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
++R ML HYR PI+++ + L + ++ ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
A A+ +D NT +AI L LA+ + + +F+
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++ L + IE L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|296333091|ref|ZP_06875545.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672793|ref|YP_003864464.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296149707|gb|EFG90602.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305411036|gb|ADM36154.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 466
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 162/489 (33%), Positives = 250/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I+ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVP------AISERFIKAYFEDVGALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + ++ G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIDFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
++R ML HYR PI+++ + L + ++ ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
A A+ +D NT +AI L LA+ + + +F+
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++ L + IE L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|16077162|ref|NP_387975.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307906|ref|ZP_03589753.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312227|ref|ZP_03594032.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317161|ref|ZP_03598455.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321424|ref|ZP_03602718.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|549024|sp|Q06752|SYC_BACSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|289284|gb|AAA21798.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|467482|dbj|BAA05328.1| cysteinyl-tRNA synthetase [Bacillus subtilis]
gi|499303|emb|CAA52167.1| cysteine--tRNA ligase [Bacillus subtilis subsp. subtilis str. 168]
gi|2632361|emb|CAB11870.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
Length = 466
Score = 392 bits (1008), Expect = e-107, Method: Composition-based stats.
Identities = 162/489 (33%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I+ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVGALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + ++ G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
++R ML HYR PI+++ + L + S+ ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFSRLKTAYSNLQHRLNSSTNLTEDDDQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
A + +D NT +AI L LA+ + + +F+
Sbjct: 345 EKVEEHRKAFEEEMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++ L + IE L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|291482466|dbj|BAI83541.1| cysteinyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
Length = 466
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 162/489 (33%), Positives = 250/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I+ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------ISERFIKAYFEDVGALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + ++ G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIEFVDQLVKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMVKKYLGDQIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
++R ML HYR PI+++ + L + ++ ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKSAFNRLKTAYSNLQHRLNSSTNLTEDDDQWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
A A+ +D NT +AI L LA+ + + +F+
Sbjct: 345 EKVEEHRKAFEEAMDDDFNTANAISVLFDLAKHANYYLQKDHTADHVITAFIEMFDRIVS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG + ++ L + IE L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGFSLGEQEL---LDQEIEDLIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|258513619|ref|YP_003189841.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777324|gb|ACV61218.1| cysteinyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 500
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 178/521 (34%), Positives = 258/521 (49%), Gaps = 87/521 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNTL R+ EF P + MYVCGPT Y+F H+GNARP++ FD + R L Y +
Sbjct: 1 MLLYNTLSRQKEEFVPAIPGRVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYLIYKGYQ- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII+RA +E S + K T+++ D T L + P+
Sbjct: 60 -VLYVQNFTDIDDKIIKRAAEEKLD------PSALAFKYTEEYYIDATSLNVMMADIHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
++H+ ++I L++ ++ G AY+++ ++ F+ +YG S R +++ G RV
Sbjct: 113 VSDHMAEIIELVEKLVQKGFAYQSDGDVYFEVRRFKDYGKLSGRALEDMLAGARVEVNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + P EP W SPWG+GRPGWHIECSAMS YLG+ FD+HGGG DLIFPH
Sbjct: 173 KRDPMDFALWKAAKPGEPSWNSPWGQGRPGWHIECSAMSLKYLGENFDMHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A E A W+HNGF+ + KMSKS GNF + E+L+ +
Sbjct: 233 HENEIAQSEAATG-EPLARYWLHNGFITVNQEKMSKSLGNFFLVREILD-------KFSP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
V+R +L THYR P+DF ++L E L + + G
Sbjct: 285 EVVRFFLLGTHYRSPLDFDDEKLAVVEKGLDRIRTSIQLLGEACQRAGVDFSMINAKEKP 344
Query: 347 -------------------IDPAVLSALYNDLNTVSAIQALHKLARESTK---------- 377
I + A+ +D NT A+ +L +LA+E+
Sbjct: 345 ARVTSIIDTRHSSMKAFIKIKTSFEQAMEDDFNTALAVGSLFELAKETNILVQSLGPKIS 404
Query: 378 ------NHDLLPIFNASAHILGIE------------VCKEHLNKNISIAIEKLVQERLIL 419
+F +LGI E + + ++ L+ R
Sbjct: 405 EQEKACLLQAAELFKLFNQVLGIFKEDLCTGYPLVTPVDESGDGMLEAVMQMLLDIRNEA 464
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K K ++ +D IR L+ ILED + TRWK++
Sbjct: 465 RKNKNWALSDRIRDALKDINVILEDT------PQGTRWKKQ 499
>gi|152980026|ref|YP_001353798.1| cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166200150|sp|A6SZV1|SYC_JANMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151280103|gb|ABR88513.1| Cysteinyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 464
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 186/481 (38%), Positives = 255/481 (53%), Gaps = 47/481 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ F I+P +RMYVCG TVYD+ HIG+AR M+VFD++ R LR E
Sbjct: 4 LKIYNTLAREKQPFTPIEPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGYE- 62
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITDIDDKII+RA + ++IS +T + +D L P H+PR
Sbjct: 63 -VNYVRNITDIDDKIIKRAAENG------ESISALTQRFIDAMDEDAAALGVQKPDHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
ATN++PQM+ LI+ + +G AY+ ++ ++ + P YG S + +D+ + G RV
Sbjct: 116 ATNYVPQMLGLIEALERNGLAYKSSDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVNT 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S EP W S WG GRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 176 GKRDPLDFVLWKSSKEAEPDEVKWASKWGSGRPGWHIECSAMACELLGQQFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 236 QFPHHENEIAQSEGAS-QHTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLA------- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIIDPA 350
+ + V+R +L HYR ++++ L +A L++
Sbjct: 288 KYDSEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALKGVAPDQAALDMTEAHALR 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH------LN 402
A+ +D NT A+ L +LA E K L A I+G+ L
Sbjct: 348 FAEAMNDDFNTPLAVAVLFELANEINKTKSPALARQLVGLAGIVGLLQRPAQQFLHAGLA 407
Query: 403 KNISIAIE----KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+E + ++ R+ K K F+ AD IR +L KG ILED T W+
Sbjct: 408 NGEDGEMETFVVEQIEARVNAKKAKNFAEADRIRAELLEKGIILEDKPGGL-----TEWR 462
Query: 459 Q 459
+
Sbjct: 463 R 463
>gi|295687961|ref|YP_003591654.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
gi|295429864|gb|ADG09036.1| cysteinyl-tRNA synthetase [Caulobacter segnis ATCC 21756]
Length = 463
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 189/481 (39%), Positives = 268/481 (55%), Gaps = 42/481 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI++TL R+ +F DP + MYVCGPTVY++AHIGN RP++VFDVLYR+LR+ YG
Sbjct: 1 MTLKIHDTLAREKRDFVPADPKRVTMYVCGPTVYNYAHIGNFRPVVVFDVLYRVLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E+ V Y RN+TD+DDKI ++A E IS+IT + + +D L L P +
Sbjct: 61 EEAVVYARNVTDVDDKINKKAADEGV------PISVITERYLAAYHEDADALGALRPDLE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++ +I ++ +G AY A ++FDT S +YG S R +DE G RV
Sbjct: 115 PKATEHIDAILEMIGQLVDNGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK S EP WESPWG GRPGWHIECSAM LGK DIH GG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGKTIDIHAGGIDLTF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA + AN W+HNGFL++ G KMSKS GN I +ELL ++
Sbjct: 235 PHHENEVAQSRCAHKTAVLANYWMHNGFLDMGGEKMSKSLGNVIIPHELL-------KTV 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------LSA 354
P VIR A+L HYR+P+D+T + L +++ L + + ++A
Sbjct: 288 PGEVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVPMDQAMEAPAEVIAA 347
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKE------ 399
L +DLNT A A +++ K + +LG
Sbjct: 348 LMDDLNTPLATSAFFEVSSLIEKAVTAGDSVAIAANKARLLEAGALLGFLQADPDSWFEG 407
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + +E L+ +R+ K +++AD IR +L++ G ++ D G W+
Sbjct: 408 DASDELKAKVEDLLAQRVAARAAKDWTAADAIRAELDALGVVVMD------GPSGATWRM 461
Query: 460 K 460
K
Sbjct: 462 K 462
>gi|148653067|ref|YP_001280160.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
gi|187629854|sp|A5WEW9|SYC_PSYWF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148572151|gb|ABQ94210.1| cysteinyl-tRNA synthetase [Psychrobacter sp. PRwf-1]
Length = 505
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 189/502 (37%), Positives = 255/502 (50%), Gaps = 69/502 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY+++ F+ + I MYVCG TVYD+ HIG+AR M+ FDV+ R LR+ E
Sbjct: 25 LKIYDSMTTNKRSFEPLQAGKIGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGYE- 83
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITDIDDKII RA + + I +T + + +D L C P +PR
Sbjct: 84 -VNYVRNITDIDDKIIARANENG------EPIGELTHRFIKAMHEDAAALGCENPDAEPR 136
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +M+ +I + HAY +N ++ + + YG S+RK+++ + G+RV
Sbjct: 137 ATEHIDEMLDMIGTLEQKQHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDT 196
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF+LWK + EP W S WG GRPGWHIECSAMS+ LG FDIHGGG DL FP
Sbjct: 197 DKKNPFDFVLWKAAKAGEPQWASSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFP 256
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A N W+H GF+N++G KMSKS GNF TI E++ + +
Sbjct: 257 HHENEIAQSEAATGCTYAHN-WMHVGFINVDGEKMSKSLGNFFTIREVM-------QKFH 308
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
IR +L +HYR ++F+ L EA L++ Q +
Sbjct: 309 PETIRFFILSSHYRSQVNFSDAALKEAHSGLTRIYQALKAADAVLNTSVSAAESIESINA 368
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPI----------FNAS 388
G ++A+ +D NT AI L LA+E K + D A
Sbjct: 369 EHAGTHSADFIAAMNDDFNTPQAISVLFSLAKEVNKLARDADDADTQAQLQLQAVQLRAL 428
Query: 389 AHILGIEVCKE-----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A IL I ++ IE L+QERL K F+ AD IR L++
Sbjct: 429 AGILNIGQLNPAEFLQAQIGEVAEDQMSDEQIEALIQERLDSKANKNFARADEIRDLLQN 488
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
G LED K T W++
Sbjct: 489 SGIELEDGK------LGTTWRR 504
>gi|225077094|ref|ZP_03720293.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
gi|224951651|gb|EEG32860.1| hypothetical protein NEIFLAOT_02147 [Neisseria flavescens
NRL30031/H210]
Length = 473
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 186/491 (37%), Positives = 255/491 (51%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKESFSPIDPKNVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPATAF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 ELSENANDYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + I+ L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTEFLQGGAVSDGLSNEEIDDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|18977396|ref|NP_578753.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|18893083|gb|AAL81148.1| cysteinyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 483
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 185/498 (37%), Positives = 255/498 (51%), Gaps = 62/498 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +K+YNTL ++ EF+ + ++MYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 5 KNMLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKG 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V V N TDIDDKII+RAR+ + + + + F++D L
Sbjct: 65 Y--TVLMVMNFTDIDDKIIKRARETG------EDPKELAERFIKIFLEDMEALKVKPADI 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+HI +I I + G+AYE ++ I F+ P YG S KI++ + G RV
Sbjct: 117 YPRVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEP 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLI
Sbjct: 177 GEGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLI 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS E W+H GF+ ++G KMSKS GNF+TI ELL +
Sbjct: 237 FPHHENEIAQSEACFGHE-WVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------KR 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------KGIIDPAV---- 351
+ VIR +L HYR P+++T + L A+ L + T + I
Sbjct: 289 YEPEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELE 348
Query: 352 --------------LSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIF 385
A+ +D NT A++A+ ++A K L F
Sbjct: 349 FKTYEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFF 408
Query: 386 NASAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ + G+ + + IE LV+ R L K K++ AD IR++L+ G
Sbjct: 409 KIVSEVFGVFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELKKLGIQ 468
Query: 442 LEDYKNPDNGQRMTRWKQ 459
LED + T WK+
Sbjct: 469 LEDRGS------ETTWKR 480
>gi|71065916|ref|YP_264643.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|109894925|sp|Q4FRZ9|SYC_PSYA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71038901|gb|AAZ19209.1| cysteinyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 488
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 180/499 (36%), Positives = 255/499 (51%), Gaps = 63/499 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IY++L + F+ + + MYVCG TVYD+ HIG+AR M+ FD+ R L
Sbjct: 11 MSQLVIYDSLTGRKQSFKPLVEGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLG 70
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRNITDIDDKII RA + + I +T + +D T L C +P
Sbjct: 71 YD--VNYVRNITDIDDKIIARAAENG------EEIGALTQRFITAMHEDATALGCQSPNA 122
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT++I +M +I+ ++ + +AY N ++ + S +YG S+R +D+ + G+RV
Sbjct: 123 EPRATDYIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+ LG FDIHGGG DL
Sbjct: 183 VENDKRNPFDFVLWKAAKPDEPQWVSSWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A E A W+H GF+N++G KMSKS GNF TI +++
Sbjct: 243 QFPHHENEIAQSEAATGCE-YARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA------- 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
+ +R +L +HYR ++F+ L EA LS+ Q
Sbjct: 295 KYLPETVRFFLLSSHYRSQVNFSDSALDEAHNSLSRLYQALKVVEQQKGQTLIVDDALIN 354
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHI 391
+ + A+ +D N+ +AI L LAR+ K L A A
Sbjct: 355 NAYASAPGQDFIKAMNDDFNSSTAISVLFGLARDINKASKVEDIESAWQLAQQLKALAQT 414
Query: 392 LGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
L I + + AI+ L+ ER K F+ AD IR QL+ G
Sbjct: 415 LNILQQPVQQFLQAVIGEAAEDGLTDEAIDSLIIERADAKTNKNFARADEIRIQLKDAGI 474
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
LED + T W++
Sbjct: 475 ELEDSR------AGTTWRR 487
>gi|154248635|ref|YP_001419593.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
gi|229558802|sp|A7IPJ0|SYC_XANP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|154162720|gb|ABS69936.1| cysteinyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
Length = 462
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 219/478 (45%), Positives = 283/478 (59%), Gaps = 39/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R + +DP+N+RMYVCGPTVYD AHIGNARP+IVFDVL+RLLR YG
Sbjct: 1 MELRLYNTLTRSKDTLRPLDPANVRMYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITD+DDKI RA + + I +T + + F +DT L CL PT +
Sbjct: 61 EGHVKYVRNITDVDDKINARAAERGIT------IRDLTEETYRWFREDTAALNCLRPTVE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M LI++++ GHAY A ++F S+P+YG SRR +DE G RV
Sbjct: 115 PRATEHIAEMRTLIESLVASGHAYVAEEHVLFHVPSMPDYGRLSRRPLDEMVAGARVDVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+K++P DF+LWK S PGW SP GRPGWHIECSAMS +LG+ FDIHGGG+D
Sbjct: 175 PYKRDPMDFVLWKPSEAGIPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGID 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENEIAQS CA A +W+HNGFL LEG KMSKS GNF+TI ELL
Sbjct: 235 LVFPHHENEIAQSRCAFHTGVMAQMWMHNGFLMLEGEKMSKSLGNFVTIRELLA------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------IDPAVL 352
WP V+RLAML THYR+PI++T Q L A L KW + + +
Sbjct: 289 -EWPGEVLRLAMLSTHYRQPINWTRQGLGFAAKTLDKWYRIIGEAEAETGEGNPFETEIA 347
Query: 353 SALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHILGIE--------VCKEHL 401
L +DLNT S I LH LA + + L F +A++LG+ ++
Sbjct: 348 DRLADDLNTPSVITHLHHLAEVAEHEEASSALRRRFKGAANLLGLLGDTETGWRARQKEA 407
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I L+ +RL K K F AD IR++L ++G +L D K+ T W+
Sbjct: 408 IALDEGVIAGLIADRLAARKAKDFKRADQIREELAAQGVVLMDNKDGT-----TSWEV 460
>gi|325205030|gb|ADZ00484.1| cysteinyl-tRNA synthetase [Neisseria meningitidis M01-240355]
Length = 473
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 188/491 (38%), Positives = 256/491 (52%), Gaps = 58/491 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 3 TIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--P 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+TYVRNITDIDDKII RA + + I +T++ Q +D L L P +P+A
Sbjct: 61 LTYVRNITDIDDKIIARAAENG------ETIGELTARFIQAMHEDADALGVLRPDIEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 115 TENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGF 174
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + EP WESPWGRGRPGWHIECSAMS + G FDIHGGG DL FPH
Sbjct: 175 KRDPLDFVLWKAAKAGEPAWESPWGRGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPH 234
Query: 245 HENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
HENEIAQS A W+HNGF+ ++G KMSKS GNF TI
Sbjct: 235 HENEIAQSVGASGHTCGHNHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIR 294
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 295 EVL-------KQYDLEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEF 347
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEV 396
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 348 DLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAQLAGCLKALGGIIGLLQ 407
Query: 397 CKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 408 RDPTAFLQGSAASDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDN--- 464
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 465 ---AGGTTWRR 472
>gi|83591300|ref|YP_431309.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|109894909|sp|Q2RFM3|SYC_MOOTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|83574214|gb|ABC20766.1| cysteinyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 476
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 186/497 (37%), Positives = 258/497 (51%), Gaps = 64/497 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNTL + EF ++P +RMYVCGPT Y++ H+GNARPM+VFD L R L Y +
Sbjct: 1 MYLYNTLTGRKEEFTPVEPGRVRMYVCGPTTYNYIHLGNARPMVVFDTLRRYLEYRNYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDK+I RAR+EH A +I + ++F KD L T PR
Sbjct: 60 -VLYVQNFTDIDDKVINRAREEH------QAPLVIAERYIEEFFKDADALNVKRATLYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ HI +I I ++ G AY A+ ++ F+ P YG S+R E + G RV
Sbjct: 113 VSQHIDAIIAAIATLVERGFAYVADGDVYFEVEKFPAYGRLSKRTPGEMRAGARVEVNTS 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF LWK + P EP WESPWG GRPGWHIECS M+ YLG FDIHGGG DLIFPH
Sbjct: 173 KRNPLDFALWKAACPGEPSWESPWGPGRPGWHIECSTMALKYLGPGFDIHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A W+HNGF+ + KMSKS GNF + ++L + +
Sbjct: 233 HENEIAQAEAQTGC-TFARFWLHNGFITVNQEKMSKSKGNFFLVRDIL-------KRFRP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
+RL +L THYR PIDF L AE L + T
Sbjct: 285 LAVRLYLLATHYRSPIDFDDAGLLAAERGLERLENTRRLLGEARCQLTGTGAETTVPART 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----PIFNASA--- 389
+ +SA+ +D NT A+ AL+ LARE + +A
Sbjct: 345 SALAGRAEELRQEFISAMDDDFNTARALAALYDLAREINSYLNGTTTIDPAALRTAAITF 404
Query: 390 -----HILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+LG+ + ++ ++ +S ++ ++Q R + + +++AD IR +L+ G +L
Sbjct: 405 EQLGGEVLGLFGQARQQVDDELLSGLMDLILQVRQEARQRRDWATADTIRDRLKELGIVL 464
Query: 443 EDYKNPDNGQRMTRWKQ 459
ED R RWK+
Sbjct: 465 EDT------PRGPRWKR 475
>gi|218439673|ref|YP_002378002.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
gi|226735050|sp|B7K7T8|SYC_CYAP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218172401|gb|ACK71134.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7424]
Length = 486
Score = 392 bits (1007), Expect = e-107, Method: Composition-based stats.
Identities = 171/506 (33%), Positives = 251/506 (49%), Gaps = 70/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F+ ++P +RMY CG TVYD+ H+G+AR +V+DV+ R L++
Sbjct: 1 MTLTIYNTLTRQKEPFEPLEPGKVRMYCCGITVYDYCHLGHARTCLVWDVVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y++N TDIDDKI+ RAR+E S + ++ + + + +D RL
Sbjct: 61 Q--VQYIQNFTDIDDKILNRARKEGTS------MEDVSERFIKAYFEDMDRLHIQKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + L+ + G+AY A+ ++ + S +YG S RK+++ + G
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPADGDVYYSVRSFSDYGKLSGRKLEDLQAGASGRVD 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF LWK + P EP WESPWG GRPGWHIECSAM LG+ DIH G
Sbjct: 173 LEDSESQKKKDPFDFALWKAAKPGEPSWESPWGLGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI +LL
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWMHNGMVKVGGEKMSKSLGNFTTIRDLLA--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
+ +RL +L THYR P+DFT + L A +
Sbjct: 289 ----QFDPMAVRLFILQTHYRNPLDFTPKALEAATNGWQTLQEGLLFGYLFGEKLGWDQL 344
Query: 340 ----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
+ + A+ +D N + L ++A++ K ++L
Sbjct: 345 SSNSSVREDNPLVQQFQDAVDDDFNFAGGLAVLFEIAKDLRKEGNILVHQEKTETSPEKL 404
Query: 383 ----PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+ +LG+E V +E + IE L+++R K K F+ D IR
Sbjct: 405 KEQWQTLVQLSQVLGLEAHPPQVHRETTDGLTDAEIETLIEQRTQARKAKNFAEGDRIRD 464
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
L++KG L D +T+W +
Sbjct: 465 DLKAKGITLIDQSGG-----ITKWHR 485
>gi|323443098|gb|EGB00718.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O46]
Length = 466
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRIFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHVPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K F+ AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKNKDFARADEIRDMLKSQSIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|227873421|ref|ZP_03991676.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
gi|227840726|gb|EEJ51101.1| cysteine--tRNA ligase [Oribacterium sinus F0268]
Length = 468
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 242/485 (49%), Gaps = 54/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ ++ EF I+ IRMYVCGPTVY+ HIGNARPMIVFD R + Y
Sbjct: 1 MKIYNTMSKQKEEFVPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRFMEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII+ A E S IT + + KD + L + T P+
Sbjct: 59 KVCYVSNYTDVDDKIIKTAMDEGTD------CSSITERYISEVEKDMSDLNIMEATAHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRVPE 181
AT I M+ LI ++ G AY + + +DT++ P+YG S + +++ + +V
Sbjct: 113 ATEEIQGMVNLIDVLVKKGFAYPVDGTVYYDTTAFPSYGKLSHKNMEDLRSGLRELKVSG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ KK+P DF+LWK EP W SPW GRPGWH EC M+ Y G DIH GG DL+
Sbjct: 173 EEEKKSPTDFVLWKPKKMGEPYWNSPWSEGRPGWHTECCVMAPKYCGGALDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ A E+ A W+HN F+N++ +KMSKS GNF T+ ++
Sbjct: 233 FPHHENEIAQYEAAHG-EQFARYWMHNAFINIDNKKMSKSLGNFFTVRDVTS-------Q 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY----- 356
+ V+R ML HYR P++F+ + A+ L + + P + +
Sbjct: 285 FDPMVLRFYMLSAHYRSPLNFSKDLMEAAKTSLGRILTAIWRLQDLIPRLEEKAFSKEEE 344
Query: 357 ------------------NDLNTVSAIQALHKLARESTK----------NHDLLPIFNAS 388
+DLNT AI + +L R + LL
Sbjct: 345 ENVKTAEGYEAIFSEKMEDDLNTADAITQIFELVRLANATVEEHSSKAYGEALLQKLETL 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI E + + +E L+Q+R K K F+ AD IR +L + G L+D +N
Sbjct: 405 MAVLGIRT--EKKEEELGAKVEALIQQRQDARKNKDFAKADQIRDELLAMGIQLKDTRNG 462
Query: 449 DNGQR 453
Q+
Sbjct: 463 VEWQK 467
>gi|223042919|ref|ZP_03612967.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|222443773|gb|EEE49870.1| cysteinyl-tRNA synthetase [Staphylococcus capitis SK14]
Length = 466
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 260/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRRKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I K + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPEIAEKYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMNHMQEIIDFIKELVDEGYAYESDGDVYFRTRQFDGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W+SP+G+GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWDSPFGKGRPGWHIECSVMAYHELGATIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
V+R M+ HYR PI++ ++ + A L + + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVGAARSGLERIRNSYKLIEEREAIATDLEEHSEYIDQ 344
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
+ + +D NT +A+ A + LA+ + K H ++ + +L
Sbjct: 345 IETILRQFEAVMDDDFNTANAVTAWYDLAKLANKYVLENTTSTKVLHRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ N+ + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGKNENELLDEDIEKLIEERNEARKNKDFARADEIRDMLKERNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|208780370|ref|ZP_03247711.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
gi|208743738|gb|EDZ90041.1| cysteinyl-tRNA synthetase [Francisella novicida FTG]
Length = 464
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R Y + V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFNYRGYD--V 65
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 66 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWNSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 412 DGVDASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 463
>gi|228475261|ref|ZP_04059986.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
gi|228270726|gb|EEK12135.1| cysteine--tRNA ligase [Staphylococcus hominis SK119]
Length = 466
Score = 392 bits (1006), Expect = e-107, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I + + F +D L T P
Sbjct: 60 -TVDYVSNFTDVDDKLINRSKE------LNESVPEIADRYIKAFYEDVGALNVKRATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE+N ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMNHMDEIIEFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G+GRPGWHIECS M+ H LGK DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + L++ + K ++ + +L
Sbjct: 345 INDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTQVIQRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILEDTPQGVRFR 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|167626735|ref|YP_001677235.1| cysteinyl-tRNA synthetase [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189082064|sp|B0U0I3|SYC_FRAP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|167596736|gb|ABZ86734.1| Cysteine--tRNA ligase [Francisella philomiragia subsp. philomiragia
ATCC 25017]
Length = 459
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 178/478 (37%), Positives = 248/478 (51%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L K EF+ I+P+ I+MYVCG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGKKEEFKPIEPNKIKMYVCGITVYDDCHIGHARTNIAFDVINRYFKYRGFD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T+VRNITDIDDKII+RA + + + + + +L L PT +PRAT
Sbjct: 61 TFVRNITDIDDKIIKRANENG------ETTDKLVERTIKSMHDAFDKLNILRPTKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+MI +I+ ++ G AY+ N ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 QTIPEMIAMIETLVEKGFAYQGTNGDVFYRVAKFADYGKLSKQNLEALEQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TINE++E +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTINEVIE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
VIR + T YR I+++ + L A + + + + A
Sbjct: 287 VIRYFLASTVYRSEINYSKENLDNARASVERLFNALRDIEPVEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTVNKYKASGYAFLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IEKL+ ER K K ++ AD IR L+++G ILED T WK+
Sbjct: 407 DGIDVSEIEKLIAERTQAKKDKNYARADEIRNDLQNQGIILEDSAT------GTTWKK 458
>gi|315652374|ref|ZP_07905363.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
gi|315485348|gb|EFU75741.1| cysteine--tRNA ligase [Eubacterium saburreum DSM 3986]
Length = 469
Score = 391 bits (1005), Expect = e-107, Method: Composition-based stats.
Identities = 182/486 (37%), Positives = 245/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF I+ +RMYVCGPTVY+ HIGNARPMI FD + R Y E
Sbjct: 1 MKIFNTLSRRKEEFVPIEEGKVRMYVCGPTVYNLIHIGNARPMIFFDTVRRYFEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E + I+ + + KD + L T P
Sbjct: 60 -VNYVSNFTDVDDKIINKAIEEGVDAAV------ISQRYINECKKDMAAMNVLPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M +I +I GHAY + + F S +YG S + IDE + G R V
Sbjct: 113 ATQEIEGMEDMIGKLIKSGHAYVAKDGTVYFRVKSFKDYGKLSHKNIDELQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++ DF+LWK EP WESPW +GRPGWHIECS MS YLG+ DIHGGG DL
Sbjct: 173 GEDGKEDSNDFVLWKPKKEGEPYWESPWSKGRPGWHIECSVMSKKYLGEQIDIHGGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A + AN W+HN FLN++ +KMSKS GNF T+ ++
Sbjct: 233 IFPHHENEIAQSESASG-KSFANYWMHNAFLNIDNKKMSKSAGNFFTVRDI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------- 343
+ V+R ML HYR P++F+ + + A+ L + +
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSAELMEAAKNSLERILTGMDNIKTVIARNNTAPITDAE 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNA 387
++ A+ +D NT A+ A+ +L + S LL +
Sbjct: 345 LSNLEIAKVLKDKFADAMDDDFNTADAVSAIFELVKLSNTTLNENSTVEYAKGLLNVIEP 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + IE L+ R K K F+ AD IR L KG +LED +
Sbjct: 405 LCDVLGIIT--ERKTEILDSEIEDLIARRTQARKNKDFALADKIRNDLLEKGIVLEDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|323350502|ref|ZP_08086164.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|322123184|gb|EFX94869.1| cysteine--tRNA ligase [Streptococcus sanguinis VMC66]
Length = 447
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVTALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + +N W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAELLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQEARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|126668153|ref|ZP_01739115.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
gi|126627423|gb|EAZ98058.1| cysteinyl-tRNA synthetase [Marinobacter sp. ELB17]
Length = 464
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 184/485 (37%), Positives = 263/485 (54%), Gaps = 51/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYNTL +K +F+ I+P + +YVCG TVYD+ H+G+AR ++ FDV+ R LR+ +
Sbjct: 1 MIRIYNTLSQKKEQFKPIEPGKVGLYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKI+ RA + + + +T + +D RL L+P +P
Sbjct: 61 --VNYVRNITDIDDKILRRADENG------EVYTCLTERMIAAMHEDEARLGVLSPNAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I MI +I+ +I GHAY N ++ F SS +YG S++K+++ G RV +
Sbjct: 113 RATAFISDMIAMIETLIAGGHAYAADNGDVYFLVSSFADYGKLSKKKLEDLLAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK + P E W SPWG GRPGWHIECSAM++H LG FDIHGGG DL+F
Sbjct: 173 QAKRSPADFALWKAAKPDEVFWPSPWGNGRPGWHIECSAMANHCLGDTFDIHGGGPDLLF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H G + + KMSKS GNF TI E++ET +
Sbjct: 233 PHHENEIAQSECATG-HTFVNTWMHAGAIRVNKEKMSKSLGNFFTIREIMET-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------DPAVL 352
PA V+R ++ +HYR +D++ L E+ L+K + D +
Sbjct: 285 PAEVVRYFLVSSHYRSQVDYSEDNLIESGRSLTKLYNALRGVTPLASDAVARTAHDTLFV 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHL-- 401
+ +D N A+ LH LA E + + +LG+ L
Sbjct: 345 KRMDDDFNCAGAMATLHALAGEMNQQRRDGDEQAAAASATVLVRLGSVLGLLQQDPELFF 404
Query: 402 -------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
N+ + IE ++Q R K + F+ AD IR +L ++G IL+D +
Sbjct: 405 QSDSGQGNELSAGQIETMIQSRADARKTRDFAGADQIRDELLARGVILDDSR------EG 458
Query: 455 TRWKQ 459
T W++
Sbjct: 459 TSWRR 463
>gi|314937165|ref|ZP_07844512.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
gi|313655784|gb|EFS19529.1| cysteine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
Length = 466
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 172/482 (35%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEAFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I + + F +D L T P
Sbjct: 60 -TVDYVSNFTDVDDKLINRSKE------LNESVPEIADRYIKAFYEDVGALNVKRATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE+N ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMNHMDEIIDFIKQLVDDGYAYESNGDVYFRTRQFDGYGKLSHQSIDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G+GRPGWHIECS M+ H LGK DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWESPFGQGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ V+ + A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNVELVNAAKSGLERIRNSYQLIKEREAIATDLETQTDYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + L++ + K ++ + +L
Sbjct: 345 INDILKQFEAVMDDDFNTANAVTAWYDLSKLANKYVLENTTSTKVIQRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLEGKENDVLLDEDIEKLIEERNEARKNKDFARADEIRDTLKEQNIILEDTPQGVRFR 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|257886072|ref|ZP_05665725.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257821928|gb|EEV49058.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,501]
Length = 470
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 253/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTASELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASDNLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F+ +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|153952840|ref|YP_001393605.1| cysteinyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219853505|ref|YP_002470627.1| hypothetical protein CKR_0162 [Clostridium kluyveri NBRC 12016]
gi|187629803|sp|A5N4M6|SYC_CLOK5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765185|sp|B9DY88|SYC_CLOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146345721|gb|EDK32257.1| CysS [Clostridium kluyveri DSM 555]
gi|219567229|dbj|BAH05213.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 465
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 174/488 (35%), Positives = 250/488 (51%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NT+ R+ EF + P I+MYVCGPTVY+F HIGNAR +VFD + R Y
Sbjct: 1 MRIFNTMTRRKEEFVPLIPGEIKMYVCGPTVYNFFHIGNARTFVVFDTVRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I++A E N + + + ++ +D L T PR
Sbjct: 59 KVNFVQNFTDIDDKMIKKANDE------NITVQQLGDRFIDEYYRDADALNIKRATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I ++I IQ++I G+AY + ++ F+ NYG S + I++ + G R+
Sbjct: 113 ATLYISKIIEFIQDLIDKGYAYSVDGDVYFNAKKFNNYGKLSGQNIEQLQSGARIDIDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF +WK EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKNPMDFAVWKSEKKGEPSWESPWGMGRPGWHIECSCMAYNILGETIDIHAGGSDLKFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + A W+H+ F+N+ +KMSKS NF T E+L+ +
Sbjct: 233 HENEIAQSEGRTG-KVFAKYWMHSAFVNINNQKMSKSLNNFFTTREILD-------KYEP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
VIRL ML HYR PI+F+++ L + L + + + +
Sbjct: 285 DVIRLFMLSGHYRTPINFSIELLDSTKSALDRICNSIINLEELSSKVKNDGILDSEIKYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N D L +
Sbjct: 345 EHLNSYKQRYIEKMDDDFNTADAISVIFDLIRDINTNIDENSSMEIIKYSLALIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI ++ +I +E L+++R K K ++ AD IR L+ KG ILED +
Sbjct: 405 LGIL--QKSKRGSIETEVELLIEKRQKARKDKNWALADKIRDDLKDKGIILEDTSD---- 458
Query: 452 QRMTRWKQ 459
RWK+
Sbjct: 459 --GVRWKR 464
>gi|254492720|ref|ZP_05105891.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268595732|ref|ZP_06129899.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268597919|ref|ZP_06132086.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268600306|ref|ZP_06134473.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268602538|ref|ZP_06136705.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268681087|ref|ZP_06147949.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268685567|ref|ZP_06152429.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291044895|ref|ZP_06570604.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|293397970|ref|ZP_06642176.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
gi|226511760|gb|EEH61105.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 1291]
gi|268549121|gb|EEZ44539.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae 35/02]
gi|268551707|gb|EEZ46726.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA19]
gi|268584437|gb|EEZ49113.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID18]
gi|268586669|gb|EEZ51345.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID1]
gi|268621371|gb|EEZ53771.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae PID332]
gi|268625851|gb|EEZ58251.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-93-1035]
gi|291011789|gb|EFE03785.1| cysteinyl-tRNA synthetase CysS [Neisseria gonorrhoeae DGI2]
gi|291611916|gb|EFF40985.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae F62]
Length = 476
Score = 391 bits (1005), Expect = e-106, Method: Composition-based stats.
Identities = 187/496 (37%), Positives = 255/496 (51%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+TYVRNITDIDDKII RA + + I + ++ Q +D L L P
Sbjct: 61 GY--PLTYVRNITDIDDKIIARAAENG------ETIGELNARFIQAMHEDADALGVLRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 113 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG D
Sbjct: 173 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGN 284
L FPHHENEIAQS A W+HNGF+ ++G KMSKS GN
Sbjct: 233 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGN 292
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
F TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 293 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
S + +A+ +D TV A+ L +LA E K +D L A I
Sbjct: 346 PAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 405
Query: 392 LGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+G+ + + IE L+ R K ++ +D IR L ILE
Sbjct: 406 IGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 466 DS------AGGTTWRR 475
>gi|114570948|ref|YP_757628.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
gi|122315352|sp|Q0AM03|SYC_MARMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|114341410|gb|ABI66690.1| cysteinyl-tRNA synthetase [Maricaulis maris MCS10]
Length = 461
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 196/476 (41%), Positives = 270/476 (56%), Gaps = 39/476 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +++T+ R+ +F+ DP + MYVCGPTVY +AHIGNARP +VFD L+R+LR YGE
Sbjct: 3 SLTLFDTMARRKRDFEPTDPGRVTMYVCGPTVYSYAHIGNARPAVVFDTLFRVLRRLYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITD+DDKIIE AR+ I ITS + D L PT +P
Sbjct: 63 DQVIYARNITDVDDKIIETARESG------KPIEDITSHYADIYRADMGALGVTLPTIEP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+HIP+MI ++QN++ GHAYEA+ ++FD SS YG S R +D+ G RV
Sbjct: 117 HATDHIPEMIGMVQNLVYSGHAYEADGHVLFDVSSYEKYGRLSNRDLDDMIAGARVEVAS 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++PADF+LWK + EPGW+SPWGRGRPGWH+ECSAMS +LGK DIHGGG DL+FP
Sbjct: 177 YKRSPADFVLWKPAKDDEPGWDSPWGRGRPGWHLECSAMSEKHLGKTIDIHGGGTDLVFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS CA + AN W+HNGFL + KMSKS GN +++L+ + +P
Sbjct: 237 HHENEIAQSVCAHKGAPMANYWLHNGFLTMGTDKMSKSLGNVQLVHDLI-------KDYP 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------PAVLSALY 356
V+R A+L HYR P+ +T L + L + G I+ PA L AL+
Sbjct: 290 GEVLRYALLTAHYRAPLTWTADLLAKTRRSLDRIYGVLRRLGEIEAAPSDVPPAFLEALH 349
Query: 357 NDLNTVSAIQALHKLARESTKN------HDLLPIFNASAHILGIEVCKEH----LNKNIS 406
+DLNT A+ L +LA + K A+A +LG+ L
Sbjct: 350 DDLNTPKALSELFQLAGNANKALSDVEKAQAKGELLAAAGMLGLGQADPDAWFGLTDLDP 409
Query: 407 IA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I+ L+ R + K + +AD +R +L + ++D G + W++
Sbjct: 410 AERARIDDLIVRRQTAREEKDWPTADAVRDELNALKVQVDD------GPEGSTWRK 459
>gi|153871051|ref|ZP_02000318.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
gi|152072482|gb|EDN69681.1| Cysteinyl-tRNA synthetase, class Ia [Beggiatoa sp. PS]
Length = 463
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 185/485 (38%), Positives = 268/485 (55%), Gaps = 50/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+N+L ++ F I+P +R+YVCG TVYD+ H+G+AR MIVFDV+ R LR E
Sbjct: 1 MLTIHNSLTKQKDPFTPIEPGKVRLYVCGMTVYDYCHVGHARVMIVFDVVVRYLRSLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + + I+ +T + Q +DT L + P +P
Sbjct: 61 --VTYVRNITDIDDKIIQRANENG------EDINQLTDRFIQAMYEDTDALNVIRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT IP+++ +IQ+++ +AY N ++ + NYG S + +D+ + G RV
Sbjct: 113 RATQSIPEIVAMIQSLLDKNYAYLTDNGDVCYAIQRFENYGQLSGKHLDDLRAGERVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP WESPWG GRPGWHIECSAMS+H LG FDIHGGG+DL F
Sbjct: 173 ESKQHPLDFVLWKTAKPGEPSWESPWGAGRPGWHIECSAMSTHCLGNHFDIHGGGMDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A E N+W+HNGF+ + KMSKS NF T+ E+LE +
Sbjct: 233 PHHENEIAQSEGATG-ETFVNVWMHNGFVRINDEKMSKSLNNFFTVREVLER-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
V+R +L +HYR ++++ Q L A+ +++ + L+
Sbjct: 285 QPEVVRYFILTSHYRSELNYSEQELEAAKQSITRLYIAIRDLPNTDEPCPDDSYNQRFLT 344
Query: 354 ALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASA-------------HILGIE 395
A+ +D NT A+ AL L++E K + +P+ +
Sbjct: 345 AMNDDFNTPEALAALFSLSKEINILRRKKVSEAIPLASELRRLGNLLGLLQAKPETFLQG 404
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+E IE+L+ ER+ K + F++AD IR L +KG ILED + T
Sbjct: 405 TSQEKEPGLSVTEIEQLIVERIDARKNRDFATADQIRADLTAKGIILEDN------AQGT 458
Query: 456 RWKQK 460
W+++
Sbjct: 459 SWRKE 463
>gi|91788726|ref|YP_549678.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
gi|122967676|sp|Q129L2|SYC_POLSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91697951|gb|ABE44780.1| cysteinyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 462
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 175/483 (36%), Positives = 248/483 (51%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F + P ++RMYVCG TVYD H+G+AR M+ FDV+ R L+
Sbjct: 1 MSLRIYNTLSRDVEVFSPLLPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRN+TDIDDKII+RA + + I +T + +D L PTH+
Sbjct: 60 -LKVTYVRNVTDIDDKIIKRAVENG------ETIRSLTDRMVVALHQDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-----NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
PRAT+ +PQM+ LI + G AY+ ++ + YG S + +DE + G
Sbjct: 113 PRATDFVPQMLSLIGTLEKKGLAYQTQSGSGQGDVNYAVRKFDGYGKLSGKSLDELRAGE 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
RV K +P DF+LWK + P EP W+SP+G GRPGWHIECSAM+ LG+ FDIH
Sbjct: 173 RVEVLDGKDDPLDFVLWKSAKPSEPDDAKWDSPYGPGRPGWHIECSAMACELLGESFDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHENEIAQS A + A W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 GGGADLQFPHHENEIAQSEGAFG-KPLAGTWMHNGFVRVDNEKMSKSLGNFFTIREILA- 290
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSK 344
+ A +R ++ HYR P++++ L +A L +
Sbjct: 291 ------KYDAETVRFFIIRAHYRSPLNYSDAHLDDARNSLKRLYTALDLVSPAVVAIDWT 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK---- 398
+A+ D T A+ L LA E K + +L + + LG+
Sbjct: 345 NPFAARFKAAMDEDFGTPEAVAVLFDLAGEVNKTRSAELAGLLKSLGGCLGLLQSAPGSY 404
Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ +I++L+ +R K K F+ AD IR L +G +L+D T W
Sbjct: 405 LQAGAGLDDASIQRLIAQRADAKKTKNFAEADRIRNDLLGQGIVLKDS------PAGTTW 458
Query: 458 KQK 460
+ +
Sbjct: 459 EVQ 461
>gi|194099737|ref|YP_002002872.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|193935027|gb|ACF30851.1| CysS [Neisseria gonorrhoeae NCCP11945]
gi|317165224|gb|ADV08765.1| hypothetical protein NGTW08_1810 [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 475
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 187/496 (37%), Positives = 255/496 (51%), Gaps = 59/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MNMT-AIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+TYVRNITDIDDKII RA + + I + ++ Q +D L L P
Sbjct: 60 GY--PLTYVRNITDIDDKIIARAAENG------ETIGELNARFIQAMHEDADALGVLRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 112 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG D
Sbjct: 172 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 231
Query: 240 LIFPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGN 284
L FPHHENEIAQS A W+HNGF+ ++G KMSKS GN
Sbjct: 232 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGN 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
F TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 292 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 344
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
S + +A+ +D TV A+ L +LA E K +D L A I
Sbjct: 345 PAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 404
Query: 392 LGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+G+ + + IE L+ R K ++ +D IR L ILE
Sbjct: 405 IGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 464
Query: 444 DYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 465 DS------AGGTTWRR 474
>gi|323526548|ref|YP_004228701.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323383550|gb|ADX55641.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 465
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 251/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GYE--VTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIAALHEDADALGIARPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ + ++ + YG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIETLEANGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKRS EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRSKAGEPADTGWDSKYGRGRPGWHIECSAMGCSLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R + HYR P++++ + +A L +
Sbjct: 288 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALTDVAPDGAALDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + D L + +LG+ +
Sbjct: 344 HAQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQ 403
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
AIE + ER + K +++AD IR +L G LED
Sbjct: 404 QAAGAAVEGALEPAAIEAKIAERAAAKQAKDYAAADRIRAELLEAGVALEDKPGGL---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|254420661|ref|ZP_05034385.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
gi|196186838|gb|EDX81814.1| cysteinyl-tRNA synthetase [Brevundimonas sp. BAL3]
Length = 469
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 181/487 (37%), Positives = 261/487 (53%), Gaps = 48/487 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ I++TL R+ F+ DP+ + +YVCGPTVYD+AHIGNARP +VFDVL RLLR YG
Sbjct: 1 MPLHIHDTLHREKRLFEPRDPNRVTLYVCGPTVYDYAHIGNARPPVVFDVLVRLLRRTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RN+TD+DDKI ++A +E I +T++ ++ D L P
Sbjct: 61 ADHVIYARNVTDVDDKINQKAAREGV------PIGEVTARYEAAYLADMGLLNVSPPDLA 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T++IP ++ IQ I+ G AY A ++FD SS P+YG+ S R +D+ G RV
Sbjct: 115 PHVTDYIPAIVAQIQAIVDAGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM LG DIHGGG+DL+F
Sbjct: 175 PYKKNPHDFVLWKPSKPDEPSWPSPWGEGRPGWHIECSAMIEQALGLPIDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
PHHENEIAQ CA ++ A W+HNGFL ++ KMSKS GN + +++L+
Sbjct: 235 PHHENEIAQGVCAHGHAQGDKAHDEYARYWMHNGFLTVDAEKMSKSVGNVLLLHDLV--- 291
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------- 348
++ P V+R A+L HYR+P+D+ L +++ L + ++
Sbjct: 292 ----QAMPGEVVRWALLSAHYRQPLDWNQGLLDQSKKSLDRLYGALHRSSGVEVLDLDPP 347
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKE 399
+ ++ +DLNT A+ +L L+ E + A A ILG+
Sbjct: 348 ADFMKSIEDDLNTPGAMASLFALSSEIERGMTAGDLDAVAQARARLMACASILGVLQSDP 407
Query: 400 HL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + I +E L+++R K + AD IR +L + ++ D +
Sbjct: 408 AAWLEGDVSDALRIEVEALLEQRAAARAAKDWPEADRIRDRLNALNVVVMDGPDGA---- 463
Query: 454 MTRWKQK 460
W+ K
Sbjct: 464 --TWRMK 468
>gi|158423408|ref|YP_001524700.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
gi|172047950|sp|A8I4X6|SYC_AZOC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|158330297|dbj|BAF87782.1| cysteinyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
Length = 462
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 217/475 (45%), Positives = 282/475 (59%), Gaps = 34/475 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F+ +DP+ +R+YVCGPTVYD AHIGNARP+IVFDVL+RLLR YG
Sbjct: 1 MELRLYNTLTRSKDAFRPLDPNLVRLYVCGPTVYDHAHIGNARPVIVFDVLFRLLRRLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKI RA + S I +T + F DT L CL P +
Sbjct: 61 ADHVRYVRNITDVDDKINARAAERSIS------IRELTEETYAWFRDDTAALGCLRPDVE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M LI+ ++ GHAY A ++F S+P YG SRR +DE G RV
Sbjct: 115 PRATEHILEMQALIERLVASGHAYVAEEHVLFHVPSMPEYGKLSRRPLDEMLNGARVDVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPW---GRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK ST +PGW SP GRPGWHIECSAMS +LG+ FDIHGGG+D
Sbjct: 175 PFKRDPMDFVLWKPSTEGQPGWPSPCGIATPGRPGWHIECSAMSWRHLGETFDIHGGGID 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENEIAQS CA A +W+HNGFL +EG KMSKS GNF+TI ELL
Sbjct: 235 LVFPHHENEIAQSRCAFDSGSMAQVWMHNGFLLVEGEKMSKSLGNFVTIRELLTD----- 289
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------IDPAVL 352
WP V+RLAML THYR+PI++T Q + A L KW + + +
Sbjct: 290 --WPGEVLRLAMLSTHYRQPINWTRQGIGFAAKTLDKWYRVIGDVEAETGEGNPFESEIA 347
Query: 353 SALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHILGIEVCKE--------HL 401
L +DLN+ SAI LH LA + + L F ++A+++G+ E
Sbjct: 348 DRLGDDLNSPSAITHLHHLADVAEHEDASSALKRRFKSAANLMGLLHETETEWRARQRAA 407
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
AI L+ +R K + F++AD+IR+QL S+G +L D K+ +TR
Sbjct: 408 VSVDPDAIAALIADRNAARKARDFATADHIREQLASQGIVLMDNKDGTTSWELTR 462
>gi|88811742|ref|ZP_01126996.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
gi|88791133|gb|EAR22246.1| cysteinyl-tRNA synthetase [Nitrococcus mobilis Nb-231]
Length = 469
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 249/487 (51%), Gaps = 53/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYN+L + F+ I+P +RMYVCG TVYD+ H+G+AR M+VFD + R LR
Sbjct: 1 MLYIYNSLTNRKEPFRPIEPGRVRMYVCGMTVYDYCHLGHARAMVVFDTVVRYLRSAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKII RA + + + ++++T + DT L CL P +P
Sbjct: 60 -RVDYVRNITDVDDKIIRRAAE------LGEPVNVLTERFIAAMHADTAALGCLLPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE--ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
RAT ++ ++ LIQ ++ G+AY+ I + YG S +++ + G RV
Sbjct: 113 RATAYMDAIVALIQRLLDRGYAYQAVDEGSIYYAVERFEGYGRLSGERLEALRAGARVEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ ADF+LWK + P EP W +PWG GRPGWHIECSAM+ LG+ FDIHGGGLDL
Sbjct: 173 GAGKRDAADFVLWKAAKPGEPSWPAPWGEGRPGWHIECSAMAGACLGQHFDIHGGGLDLK 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + N W+HNG + + KMSKS GNF T+ E+L +
Sbjct: 233 FPHHENEIAQSEAAWG-GRYVNFWMHNGHIRINDEKMSKSLGNFFTVREVL-------QV 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAV 351
+ A IR +L +HYR P++++ L + L + A
Sbjct: 285 YRAEEIRYFLLSSHYRSPLNYSTSDLDNSRAALERLYLALRDLPFTEASPALAAPYREAF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAH-----------IL 392
A+ +D NT A+ L LARE + D L L
Sbjct: 345 RQAMDDDFNTPLALAVLFDLAREINRRRDRFESQAAALAATLRELGGLLGLAQVAPEVFL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
S +E L+ ER + K + F++AD IR +L+++G LED
Sbjct: 405 KGGAGSSVAVGIASERVEALLAERALARKNRDFATADRIRDELQAQGIALEDT------P 458
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 459 QGTAWRR 465
>gi|323439800|gb|EGA97517.1| cysteinyl-tRNA synthetase [Staphylococcus aureus O11]
Length = 466
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 171/482 (35%), Positives = 256/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N ++ I K F +D L T P
Sbjct: 60 -NVEYVSNFTDVDDKLIKRSQE------LNQSVPEIAEKYIAAFHEDVGALNVRKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I++++ G+AYE+ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMDDIIQFIKDLVDQGYAYESGGDVYFRTRKFEGYGKLSHQSIDDLKVGARIDAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWK++ E W+SP+G GRPGWHIECS M+ H LG DIH GG DL FP
Sbjct: 173 HKEDALDFTLWKKAKSGEISWDSPFGEGRPGWHIECSVMAFHELGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVESARSGLERIRNSYQLIEERAQIATNIENQQTYIDQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + LA+ + K ++ + +L
Sbjct: 345 IDAILNRFETVMNDDFNTANAITAWYDLAKLANKYVLENTTSTEVIDKFKAVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + ++ ++ + +EKL++ER K K FS AD IR L+S+ ILED +
Sbjct: 405 GVPLKSKNADELLDEDVEKLIEERNEARKKKDFSRADEIRDMLKSQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|291563603|emb|CBL42419.1| cysteinyl-tRNA synthetase [butyrate-producing bacterium SS3/4]
Length = 469
Score = 391 bits (1004), Expect = e-106, Method: Composition-based stats.
Identities = 171/486 (35%), Positives = 243/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL ++ EF ++P ++MYVCGPTVY+F HIGNARPMIVFD + R Y +
Sbjct: 1 MKIYNTLTKRKEEFVPVEPGKVKMYVCGPTVYNFIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEGVDAET------ISKRYIAECKKDMEGMNIEPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +I +I G+AY A+ + + +YG S + +D+ + G R V
Sbjct: 113 ATEEICGMLNMISTLIEKGYAYVAADGTVYYSVRKFKDYGKLSHKNLDDLQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LWK EP WESPW GRPGWHIECS M+ YLG DIH GG DL
Sbjct: 173 GEEGKQDPNDFVLWKPKKEGEPYWESPWCEGRPGWHIECSVMAKRYLGDEIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A+ + A W+HN FLN++ +KMSKS GNF T+ E+
Sbjct: 233 IFPHHENEIAQSEAANG-KPFAKYWMHNAFLNIDNKKMSKSLGNFFTVREI-------SE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
+ V+R ML HYR P++F+ + ++ L + +
Sbjct: 285 KYDLQVLRFFMLSAHYRSPLNFSADLMEASKNGLERILTGMEKLREAEAKAADGTMTEEE 344
Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
+A+ +D NT AI A+ +L + S +
Sbjct: 345 LENKKKAMELVAKYEAAMDDDFNTADAISAIFELIKLSNSTVSGASTKEYVSWMKNEIQR 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++GI E + + +E L+ +R K K F+ AD IR +L G +LED +
Sbjct: 405 LCDVMGIIT--EKKAEVLDSEVEDLIAQRQAARKAKNFALADEIRGKLLDMGIVLEDTRE 462
Query: 448 PDNGQR 453
+R
Sbjct: 463 GVKWKR 468
>gi|325697466|gb|EGD39352.1| cysteine--tRNA ligase [Streptococcus sanguinis SK160]
Length = 450
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 159/469 (33%), Positives = 239/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D + L T
Sbjct: 61 GFE--VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGII 347
++ V+R HYR+PI+FT + + +A L T +
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKN 404
+A+ D N + I + +LA+ + D+ F + GI +E
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTADIKAAFAELLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 LDADIERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTKDGVRWTR 449
>gi|23097554|ref|NP_691020.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
gi|30316161|sp|Q8ETZ9|SYC_OCEIH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|22775777|dbj|BAC12055.1| cysteinyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
Length = 468
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 174/489 (35%), Positives = 248/489 (50%), Gaps = 55/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ F+ ++ ++MYVCGPTVY++ HIGNARP IVFD + R L Y
Sbjct: 1 MTIQIYNTLTRQKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLEYRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDKII+ A+ +P+ + + +++D L T
Sbjct: 61 D--VDYVLNFTDVDDKIIKTAKDVGEEVPV------LADRFVNAYLEDVGALGVKKATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + + +I I +I G+AYEA+ ++ F S YG S + IDE + G R+
Sbjct: 113 PRVMDTMDDIIAFISALIEKGYAYEADGDVYFKPRSFDTYGKLSHQSIDELRSGARIQVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK++ E W+SPWG GRPGWHIECSAM +LG DIH GG DL F
Sbjct: 173 EKKEDPLDFALWKQAKDDEIAWKSPWGEGRPGWHIECSAMVKKHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + E AN W+HNG++N++ KMSKS GNF+ +L+ ++
Sbjct: 233 PHHENEIAQSEAMNG-ETFANYWMHNGYINIDNEKMSKSLGNFVLARDLI-------QAH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI+FT L A+ L + +
Sbjct: 285 DPRVLRFFMLSVHYRNPINFTEALLESAKTSLERIQTAYHNLSHRRDSSLNLTNDDAKWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
+ +D NT +AI L L++E+ +
Sbjct: 345 QLVSAAMSKFEQDMDDDFNTANAISVLFDLSKEANVYLQENQTSTEVIDAFQDAISQILT 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI + ++ + IE L++ER K + F+ AD IR L+ KG +LED
Sbjct: 405 VLGINILEDE-ETLLDETIEALIKERNEARKNRNFARADEIRDMLKEKGIVLEDT----- 458
Query: 451 GQRMTRWKQ 459
+ RWK+
Sbjct: 459 -PQGVRWKR 466
>gi|268600169|ref|ZP_06134336.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268685235|ref|ZP_06152097.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
gi|268584300|gb|EEZ48976.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae MS11]
gi|268625519|gb|EEZ57919.1| cysteinyl-tRNA synthetase [Neisseria gonorrhoeae SK-92-679]
Length = 476
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 187/496 (37%), Positives = 255/496 (51%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MMNMTAIYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLREC 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+TYVRNITDIDDKII RA + + I + ++ Q +D L L P
Sbjct: 61 GY--PLTYVRNITDIDDKIIARAAENG------ETIGELNARFIQAMHEDADALGVLRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+AT +IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV
Sbjct: 113 IEPKATENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG D
Sbjct: 173 EVDGFKRDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGN 284
L FPHHENEIAQS A W+HNGF+ ++G KMSKS GN
Sbjct: 233 LQFPHHENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGN 292
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
F TI E+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 293 FFTIREVL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNT 345
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHI 391
S + +A+ +D TV A+ L +LA E K +D L A I
Sbjct: 346 PAAEFDLSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGI 405
Query: 392 LGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+G+ + + IE L+ R K ++ +D IR L ILE
Sbjct: 406 IGLLQRNPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 466 DS------AGGTTWRR 475
>gi|295401941|ref|ZP_06811904.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
C56-YS93]
gi|312109240|ref|YP_003987556.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|294976071|gb|EFG51686.1| cysteinyl-tRNA synthetase [Geobacillus thermoglucosidasius
C56-YS93]
gi|311214341|gb|ADP72945.1| cysteinyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
Length = 466
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 177/490 (36%), Positives = 253/490 (51%), Gaps = 57/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR IVFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDK+I+ AR+ +P + + Q + +D T L C
Sbjct: 61 YE--VKYVSNFTDVDDKLIKAARELGEDVPT------VAERFIQAYFEDITALGCKKADV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T ++ +I IQ ++ G+AYE + ++ + T YG S + IDE K G R+
Sbjct: 113 HPRVTENMDTIIEFIQALVEKGYAYEVDGDVYYRTRKFAEYGKLSHQSIDELKAGARIEI 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL
Sbjct: 173 GEKKEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG+LN+ KMSKS GNF+ +++++ R
Sbjct: 233 FPHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------RQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
V+R ML HYR PI+++ + L A+ L + +
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLENAKKGLERLKTAYFNLKHRLQSSTNLTDDDEQW 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
A + + +D NT + I L +LA+++ H L
Sbjct: 345 LARIQEQHEAFIREMDDDFNTANGIAVLFELAKQANLYLHEKNTSERVIHAFLRELEQLL 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI + +E L L+Q+R K + F+ AD IR +L +K ILED
Sbjct: 405 DVLGITLQEEELLDEEIE---ALIQKRNEARKNRNFALADQIRDELRAKNIILEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|70727478|ref|YP_254394.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
gi|109894948|sp|Q4L3I9|SYC_STAHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|68448204|dbj|BAE05788.1| cysteinyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
Length = 466
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 170/482 (35%), Positives = 257/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I R+++ +N+++ I + + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLINRSKE------LNESVPDIADRYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R NH+ ++I I+ ++ G+AYE++ ++ F T YG S + +D+ K+G R+
Sbjct: 113 RVMNHMDEIIDFIKELVDEGYAYESDGDVYFRTRKFEGYGKLSHQSLDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E WESP+G GRPGWHIECS M+ H LGK DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFHELGKTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVNAAKSGLERIRNSYQLIEERETIATDIVDQSKYIEQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +A+ A + L++ + K ++ + +L
Sbjct: 345 IDAIIEQFETVMDDDFNTANAVTAWYDLSKLANKYVLENNTSTQVISRFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + IEKL++ER K K F+ AD IR L+ + ILED +
Sbjct: 405 GVPLKGNKSDMLLDEDIEKLIEERNEARKNKDFARADEIRDMLKEQNIILEDTPQGVRFK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|302024504|ref|ZP_07249715.1| cysteinyl-tRNA synthetase [Streptococcus suis 05HAS68]
gi|330833540|ref|YP_004402365.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
gi|329307763|gb|AEB82179.1| cysteinyl-tRNA synthetase [Streptococcus suis ST3]
Length = 447
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ ++MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY+ N TD+DDKII+ A + + ++ K F +D +L T P
Sbjct: 61 --VTYISNFTDVDDKIIKAANEAGMTT------KELSDKFIAAFKEDVAKLGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I +Q +I G+AYEA+ ++ F NY + + + + + G +
Sbjct: 113 RVIDYMGEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + P E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS C + AN W+HN LN+ KMSKS GNF+T +++LE
Sbjct: 233 EFPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSAL--- 355
V+R + HYR P+++T + E + K T + +D + L
Sbjct: 285 QIDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAA 344
Query: 356 -----YNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+D N + I A+ A+ + + F + GI +E +
Sbjct: 345 FEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEE----VLDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 EIEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|320538832|ref|ZP_08038508.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
gi|320030992|gb|EFW12995.1| cysteinyl-tRNA synthetase [Serratia symbiotica str. Tucson]
Length = 461
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 248/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ ID + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIDAGKVGMYVCGVTLYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TDIDDKII R+ + + +T + + D L P +P
Sbjct: 60 -SLNYVRNVTDIDDKIIRRSAENA------ETCDQLTERMLAEMHADFDSLLIERPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I + Q +I HAY +N +++F S P YG S + +++ + G RV
Sbjct: 113 RATQHIAEIIAITQRLIDRNHAYVASNGDVMFSIDSDPQYGLLSHQALEQLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF+LWK S P EP W+SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKHNPMDFVLWKMSKPGEPSWQSPWGAGRPGWHIECSAMNCKQLGPHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSSCAHD-GRYVNYWMHSGMVMIDKEKMSKSLDNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARTALERLYTALRGADADAQPMGGDAFEARFRQ 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK------- 398
A+ +D NT A L +LARE + + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFELAREVNRLKNEDRVAANGMAATLRKLAKVLGLLQQQPEQLLQN 404
Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+N IE L+++R + K ++ AD R +L +LED + T W
Sbjct: 405 GAQVNGGEGAEIEALIKQRNEARETKNWALADVARDRLNEMNIVLED------APQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|30316338|sp|Q8U227|SYC_PYRFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 477
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 184/496 (37%), Positives = 254/496 (51%), Gaps = 62/496 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL ++ EF+ + ++MYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MLKVYNTLTKQKEEFKPLREGEVKMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+RAR+ + + + + F++D L P
Sbjct: 60 -TVLMVMNFTDIDDKIIKRARETG------EDPKELAERFIKIFLEDMEALKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T+HI +I I + G+AYE ++ I F+ P YG S KI++ + G RV
Sbjct: 113 RVTDHIDDIIEFIGKLKEKGYAYEGSDGIYFEVKKFPEYGKLSGVKIEDLQKGARVEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIFP
Sbjct: 173 GKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E W+H GF+ ++G KMSKS GNF+TI ELL + +
Sbjct: 233 HHENEIAQSEACFGHE-WVKYWLHTGFVMVKGEKMSKSLGNFVTIRELL-------KRYE 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------KGIIDPAV------ 351
VIR +L HYR P+++T + L A+ L + T + I
Sbjct: 285 PEVIRFFVLQKHYRSPLEYTEEGLQHAKNNLQRLYNTLENIRVALRNAEISYTWGELEFK 344
Query: 352 ------------LSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNA 387
A+ +D NT A++A+ ++A K L F
Sbjct: 345 TYEIIREGKRKFYEAMDDDFNTAEALKAVFEVANAINKYLTEANKPKESILRKALEFFKI 404
Query: 388 SAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + G+ + + IE LV+ R L K K++ AD IR++L+ G LE
Sbjct: 405 VSEVFGVFEDYFREETKEREESEKLIELLVEVRKQLRKEKRYELADMIREELKKLGIQLE 464
Query: 444 DYKNPDNGQRMTRWKQ 459
D + T WK+
Sbjct: 465 DRGS------ETTWKR 474
>gi|307154328|ref|YP_003889712.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306984556|gb|ADN16437.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 480
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 171/501 (34%), Positives = 251/501 (50%), Gaps = 65/501 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ FQ I+P +RMY CG TVYD+ H+G+AR +V+DV+ R L++
Sbjct: 1 MTLTIYNTLTRRKEPFQPIEPGKVRMYCCGITVYDYCHLGHARTCVVWDVVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y++N TDIDDKI+ RA++E S + ++ + + + +D RL
Sbjct: 61 Q--VKYIQNFTDIDDKILNRAKKEGTS------MEEVSERFIKAYFEDMDRLHIEKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + L+ + G+AY A+ ++ + +YG S RK+++ + G +
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYAADGDVYYSVRRFADYGKLSGRKLEDLQAGASGRVE 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF LWK + EP WESPWG GRPGWHIECSAM LG+ DIH G
Sbjct: 173 LEDPETQKKKDPFDFALWKAAKAGEPSWESPWGEGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI +LL+ +
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-QPLARYWMHNGMVKVGGDKMSKSLGNFTTIRDLLDKVE 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFT----------VQRLTEAEILLSKWPQTSTSKG- 345
V+RL +L THYR P+DFT Q L E + + +
Sbjct: 292 -------PMVVRLFILQTHYRNPVDFTEKAIDAASNGWQTLQEGLLFGHHYGEKLAWDDL 344
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
+ + +D N + L +LA+E K ++L
Sbjct: 345 PGATVPELVQKYREIVDDDFNFAGGLAVLFELAKELRKEGNILVHQGKTDTSPEKLKAQW 404
Query: 383 PIFNASAHILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ +LG+E ++ IE L+++R K K F+ D IR +L++
Sbjct: 405 QTLVELSQVLGLEAIAAQPEQETTGLSDADIEALIEQRAQARKAKNFAEGDRIRDELKAN 464
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G L D G +T+W +
Sbjct: 465 GITLID-----AGGGVTKWHR 480
>gi|207722904|ref|YP_002253338.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
gi|206588088|emb|CAQ18668.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum MolK2]
Length = 465
Score = 390 bits (1003), Expect = e-106, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 257/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + I +T + +D L P
Sbjct: 60 AYD--VTYVRNITDIDDKIIKRAVENG------ETIGALTDRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ A+ ++ + P YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQ+ A+ N W+HNGF+ + KMSKS GNF TI E+L
Sbjct: 232 GADLQFPHHENEIAQAEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH--- 400
A+ +D NT A+ L +LA E K L+ A ++G+ H
Sbjct: 344 SHGQRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFL 403
Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ ++ +E ++ R + + F+ AD IR L + G +LED
Sbjct: 404 QGGVGAAADGLDTVEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGG----- 458
Query: 454 MTRWKQ 459
+T W++
Sbjct: 459 VTEWRR 464
>gi|59802301|ref|YP_209013.1| hypothetical protein NGO1993 [Neisseria gonorrhoeae FA 1090]
gi|239999926|ref|ZP_04719850.1| CysS [Neisseria gonorrhoeae 35/02]
gi|240013127|ref|ZP_04720040.1| CysS [Neisseria gonorrhoeae DGI18]
gi|240015570|ref|ZP_04722110.1| CysS [Neisseria gonorrhoeae FA6140]
gi|240081823|ref|ZP_04726366.1| CysS [Neisseria gonorrhoeae FA19]
gi|240114660|ref|ZP_04728722.1| CysS [Neisseria gonorrhoeae PID18]
gi|240116861|ref|ZP_04730923.1| CysS [Neisseria gonorrhoeae PID1]
gi|240120198|ref|ZP_04733160.1| CysS [Neisseria gonorrhoeae PID24-1]
gi|240122495|ref|ZP_04735451.1| CysS [Neisseria gonorrhoeae PID332]
gi|240127206|ref|ZP_04739867.1| CysS [Neisseria gonorrhoeae SK-93-1035]
gi|260441533|ref|ZP_05795349.1| CysS [Neisseria gonorrhoeae DGI2]
gi|81311142|sp|Q5F5D6|SYC_NEIG1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|59719196|gb|AAW90601.1| putative cysteinyl-tRNA synthetase [Neisseria gonorrhoeae FA 1090]
Length = 473
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 186/490 (37%), Positives = 254/490 (51%), Gaps = 58/490 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII RA + + I + ++ Q +D L L P +P+AT
Sbjct: 62 TYVRNITDIDDKIIARAAENG------ETIGELNARFIQAMHEDADALGVLRPDIEPKAT 115
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235
Query: 246 ENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
ENEIAQS A W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGQSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC 397
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408
Query: 398 KEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 409 NPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDS---- 464
Query: 450 NGQRMTRWKQ 459
T W++
Sbjct: 465 --AGGTTWRR 472
>gi|148657145|ref|YP_001277350.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|148569255|gb|ABQ91400.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 478
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 180/493 (36%), Positives = 251/493 (50%), Gaps = 59/493 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R + F+ ++P ++MYVCG TVYD AHIG+A IVFDV+ R L Y
Sbjct: 1 MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+DDKII RAR+ + +F++D L
Sbjct: 61 --AVQHVVNFTDVDDKIINRAREIGRD------PKELAESYIAEFLEDLEALNVKRAHIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +P++ I +I GHAY + ++ F +++P+YG SRR +D+ G R+
Sbjct: 113 PRATETMPEIQQFITRLIETGHAYVVDGDVYFRIATVPDYGKLSRRSLDDMIAGNRISVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+ +LG+ DIHGGG DLIF
Sbjct: 173 ERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGADLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------KMSKSNGNFITINELLE 293
PHHENEIAQ+ + A W+HNG L ++ R KMSKS GN +TI E L
Sbjct: 233 PHHENEIAQTESLTG-KPFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLA 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIID---- 348
+ V+RL +L + YR P+ F + + E L + G I+
Sbjct: 292 -------QYHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLVRLRSALEPPIGTIEAGLA 344
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
++A+ +D NT A+ AL L R D F
Sbjct: 345 VDVLLAAARTTRERFIAAMDDDFNTAGALAALFDLVRAINTARDAGVGGAPFAEAQATFR 404
Query: 387 ASAHILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LG+ ++ + + + I+ L++ R L K K+F+ AD +R +L G LED
Sbjct: 405 ELTDVLGLTLTPQQPIIQQAAPFIDLLIEVRSELRKAKQFALADMVRNRLADLGITLEDT 464
Query: 446 KNPDNGQRMTRWK 458
+ TRWK
Sbjct: 465 ------PQGTRWK 471
>gi|315659130|ref|ZP_07911995.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
gi|315495854|gb|EFU84184.1| cysteine--tRNA ligase [Staphylococcus lugdunensis M23590]
Length = 466
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 169/482 (35%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y +
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N+++ I + Q F +D L T P
Sbjct: 61 --VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I+N++ G+AYE++ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G GRPGWHIECS M+ H LGK DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ ++ A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + +D NT +A+ A + LA+ + K ++ + +L
Sbjct: 345 IDEILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+++ ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILEDTPQGVRYK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|125718833|ref|YP_001035966.1| cysteinyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|125498750|gb|ABN45416.1| Cysteinyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
Length = 447
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKGALAELLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|110633319|ref|YP_673527.1| cysteinyl-tRNA synthetase [Mesorhizobium sp. BNC1]
gi|110284303|gb|ABG62362.1| cysteinyl-tRNA synthetase [Chelativorans sp. BNC1]
Length = 506
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 246/491 (50%), Positives = 323/491 (65%), Gaps = 33/491 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +K+YNTL R+ EF +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR YG
Sbjct: 15 KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
+ VTYVRNITD+DDKI RA ++ + +N+AI +T + QF D L C
Sbjct: 75 DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 134
Query: 117 LAPTHQPRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
LAPTH+PRAT + M LIQ +I GHAY A EI+FDT+S+P+YG S+R+
Sbjct: 135 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 194
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR--------GRPGWHIECSA 221
+++Q+ G RV HK+NP+DF+LWK S+ EPGWE + GRPGWHIECSA
Sbjct: 195 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 254
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA AN W+HNGF+ +EG+KM+KS
Sbjct: 255 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 314
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF+TI++LL T+ FGGR WP V+RLA+LMTHYREP+DF++++L EAE +L W +
Sbjct: 315 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 374
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVC 397
+ AV AL +DL T +AI LH L ++ + + A+A +LG+
Sbjct: 375 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 434
Query: 398 KEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ A+E+ V RL LL+ K F AD IR++L +G L DYK+P+
Sbjct: 435 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 494
Query: 450 NGQRMTRWKQK 460
G+R T+W+ K
Sbjct: 495 TGERRTKWEVK 505
>gi|223933939|ref|ZP_03625899.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
gi|223897386|gb|EEF63787.1| cysteinyl-tRNA synthetase [Streptococcus suis 89/1591]
Length = 447
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ ++MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY+ N TD+DDKII+ A + + ++ K F +D +L T P
Sbjct: 61 --VTYISNFTDVDDKIIKAANEAGMTT------KELSDKFIAAFREDVAKLGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I +Q +I G+AYEA+ ++ F NY + + + + + G +
Sbjct: 113 RVIDYMDEIIDFVQVLIDKGYAYEASGDVYFRVEKAENYARLANKTLSDLEAGASGRVEG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + P E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGQLKEHPFDFALWKTAKPGEVSWESPWGAGRPGWHIECSVMATEILGATIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS C + AN W+HN LN+ KMSKS GNF+T +++LE
Sbjct: 233 EFPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSAL--- 355
V+R + HYR P+++T + E + K T + +D + L
Sbjct: 285 QIDGQVLRFFLSTQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAA 344
Query: 356 -----YNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+D N + I A+ A+ + + F + GI +E +
Sbjct: 345 FEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLEVFGIVFEEE----VLDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 EIEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|69245493|ref|ZP_00603457.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257879803|ref|ZP_05659456.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257882529|ref|ZP_05662182.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257891644|ref|ZP_05671297.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257894121|ref|ZP_05673774.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|258614229|ref|ZP_05711999.1| cysteinyl-tRNA synthetase [Enterococcus faecium DO]
gi|260559477|ref|ZP_05831658.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
gi|261206628|ref|ZP_05921326.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289564989|ref|ZP_06445443.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|293564124|ref|ZP_06678530.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
gi|293570060|ref|ZP_06681140.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
gi|294614954|ref|ZP_06694845.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
gi|294618278|ref|ZP_06697860.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
gi|294623060|ref|ZP_06701947.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
gi|314940063|ref|ZP_07847246.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|314942530|ref|ZP_07849369.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|314949364|ref|ZP_07852705.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|314952824|ref|ZP_07855796.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|314993743|ref|ZP_07859088.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|314994808|ref|ZP_07859940.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|68195744|gb|EAN10181.1| Cysteinyl-tRNA synthetase, class Ia [Enterococcus faecium DO]
gi|257814031|gb|EEV42789.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257818187|gb|EEV45515.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257828004|gb|EEV54630.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257830500|gb|EEV57107.1| cysteinyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|260074576|gb|EEW62897.1| cysteinyl-tRNA synthetase [Enterococcus faecium C68]
gi|260079121|gb|EEW66814.1| cysteinyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289163196|gb|EFD11042.1| cysteinyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|291587432|gb|EFF19316.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1071]
gi|291592240|gb|EFF23858.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1636]
gi|291595494|gb|EFF26805.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1679]
gi|291597533|gb|EFF28697.1| cysteinyl-tRNA synthetase [Enterococcus faecium U0317]
gi|291604042|gb|EFF33570.1| cysteinyl-tRNA synthetase [Enterococcus faecium E1162]
gi|313590992|gb|EFR69837.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|313591843|gb|EFR70688.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|313595058|gb|EFR73903.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|313598751|gb|EFR77596.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|313640663|gb|EFS05243.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|313644195|gb|EFS08775.1| cysteinyl-tRNA synthetase [Enterococcus faecium TX0082]
Length = 470
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 252/494 (51%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK EF I ++ MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKIYNTLTRKKEEFIPIQKGHVGMYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + P + + + F +DT L T P
Sbjct: 60 -KVDFVSNFTDVDDKIIRTANELGITAP------EVADRFIRAFEEDTKALNVEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+P ++ IQ ++ G+AYE++ ++ + T NYG S + IDE ++G
Sbjct: 113 RVMDHMPDILAFIQVLVEKGYAYESSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK++ P E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQQKEDPLDFALWKQAKPGEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-KKFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + T +
Sbjct: 286 -KNVDPQVLRFFMATTQYRRPIRYSETTMKEAATNLQRLKNTFDNLKFRQETASENLADD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ + + +D N + I +++LA+ D +F+
Sbjct: 345 ADKIALLENLEQRFIEEMDDDFNAANGITVVYELAKWLNTYLDQPKVSAAVLAQGEALFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L++ER + F +D IR L+ KG +LED
Sbjct: 405 QWLSIFGILFTAEEL---LDEEIEQLIEERNQARSNRDFVRSDEIRDLLKEKGILLEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|257088530|ref|ZP_05582891.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|256997342|gb|EEU83862.1| cysteinyl-tRNA synthetase [Enterococcus faecalis CH188]
Length = 470
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|240114101|ref|ZP_04728591.1| CysS [Neisseria gonorrhoeae MS11]
gi|240126656|ref|ZP_04739542.1| CysS [Neisseria gonorrhoeae SK-92-679]
Length = 473
Score = 390 bits (1002), Expect = e-106, Method: Composition-based stats.
Identities = 186/490 (37%), Positives = 254/490 (51%), Gaps = 58/490 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R+ F IDP N+RMYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 4 IYNTLTRQKEPFAPIDPENVRMYVCGMTVYDYCHLGHARVMVVFDMIARWLRECGY--PL 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII RA + + I + ++ Q +D L L P +P+AT
Sbjct: 62 TYVRNITDIDDKIIARAAENG------ETIGELNARFIQAMHEDADALGVLRPDIEPKAT 115
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+IPQMI +I+ +I +G AY AN ++ + YG S + +D+ + G RV K
Sbjct: 116 ENIPQMIAMIETLIQNGKAYPAANGDVYYAVREFAAYGQLSGKSLDDLRAGERVEVDGFK 175
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++P DF+LWK + EP WESPWG GRPGWHIECSAMS + G FDIHGGG DL FPHH
Sbjct: 176 RDPLDFVLWKAAKAGEPAWESPWGNGRPGWHIECSAMSENLFGDTFDIHGGGADLQFPHH 235
Query: 246 ENEIAQSCCADRI---------------EKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
ENEIAQS A W+HNGF+ ++G KMSKS GNF TI E
Sbjct: 236 ENEIAQSVGASGHTCGHDHAQTHHGRSIASHVKYWLHNGFIRVDGEKMSKSLGNFFTIRE 295
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
+L + + V+R +L HYR P++++ L +A+ L++ T
Sbjct: 296 VL-------KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKGALTRLYTTLKNTPAAEFD 348
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVC 397
S + +A+ +D TV A+ L +LA E K +D L A I+G+
Sbjct: 349 LSENANGYTRRFYAAMNDDFGTVEAVAVLFELAGEVNKTNDAHLAGCLKALGGIIGLLQR 408
Query: 398 KEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + IE L+ R K ++ +D IR L ILED
Sbjct: 409 NPIEFLQGGAVSDGLSNEEIEDLIARRKQARADKNWAESDRIRDLLNEHKIILEDS---- 464
Query: 450 NGQRMTRWKQ 459
T W++
Sbjct: 465 --AGGTTWRR 472
>gi|163938097|ref|YP_001642981.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229558616|sp|A9VNA2|SYC_BACWK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|163860294|gb|ABY41353.1| cysteinyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
Length = 465
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 174/489 (35%), Positives = 252/489 (51%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFMPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
+IR ML HYR PI+F+ L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 AEMEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + IE L+Q+R+ + + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEEL---LDEEIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|289551670|ref|YP_003472574.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
gi|289181201|gb|ADC88446.1| Cysteinyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
Length = 466
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 169/482 (35%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y +
Sbjct: 1 MITLYNTLTRQKEVFKPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +N+++ I + Q F +D L T P
Sbjct: 61 --VDYVSNFTDVDDKLIKRSQE------LNESVPEIADRYIQAFYEDVGALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I+N++ G+AYE++ ++ F T YG S + ID+ K+G R+
Sbjct: 113 RVMDHMEDIIEFIKNLVDEGYAYESHGDVYFRTRKFDGYGKLSHQSIDDLKVGARIEAGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK++ P E W SP+G GRPGWHIECS M+ H LGK DIH GG DL FP
Sbjct: 173 QKEDALDFTLWKKAKPGEISWSSPFGEGRPGWHIECSVMAYHELGKTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHAPFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ ++ A+ L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNMELVSAAKSGLERIRNSYQLIEERETIATNIVEQTDYIEQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + +D NT +A+ A + LA+ + K ++ + +L
Sbjct: 345 IDAILKQFEQVMNDDFNTANAVTAWYDLAKLANKYVLEKSTSTAVIERFKEVYQIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + + IE+++ ER K K F+ AD IR L+++ ILED +
Sbjct: 405 GVPLKGQEADVLLDEEIEQMIAERDEARKNKDFARADEIRDTLKAQHIILEDTPQGVRYK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|257081388|ref|ZP_05575749.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|256989418|gb|EEU76720.1| cysteinyl-tRNA synthetase [Enterococcus faecalis E1Sol]
Length = 470
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---LDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|75909922|ref|YP_324218.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|109894882|sp|Q3M6R3|SYC_ANAVT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|75703647|gb|ABA23323.1| cysteinyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 486
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 172/500 (34%), Positives = 250/500 (50%), Gaps = 58/500 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ + ++P ++MY CG TVYD+ H+G+AR IV+D + R L +
Sbjct: 1 MTLTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI+ RA+++ + ++ ++++ + D RL L
Sbjct: 61 E--VKYIQNFTDIDDKILNRAKEQGST------MAEVSNRFIDAYFADIRRLNVLDADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-----GT 177
PR T HIP++ LIQ + G AY ++ + P+YG S R++++ +
Sbjct: 113 PRVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVD 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM LG DIHGGG
Sbjct: 173 VEDSEPKKQHPFDFALWKAAKPGEPAWDSPWGQGRPGWHIECSAMIRSKLGATIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK- 296
DLIFPHHENEIAQS A + A W HNG + + G+KMSKS GNFITI ELL+
Sbjct: 233 GDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGS 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
+ G +RL +L HYR+P+DFT + + AE W Q
Sbjct: 292 WKGDPVNPMAVRLFVLQAHYRKPLDFTEEAIANAENSWKTLKEGLLFGYQYGEKLGWGQE 351
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
S + +D N + L +LA+E + ++L
Sbjct: 352 SAIIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKTPSDELQRQWN 411
Query: 384 IFNASAHILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+LG+E + IE L+++R K K FS +D IR +L+++G
Sbjct: 412 TLVTLGKVLGLEATPDDETLTQPGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQG 471
Query: 440 FILEDYKNPDNGQRMTRWKQ 459
L D + TRW +
Sbjct: 472 VTLIDS------PQGTRWHR 485
>gi|322388262|ref|ZP_08061866.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
gi|321140934|gb|EFX36435.1| cysteine--tRNA ligase [Streptococcus infantis ATCC 700779]
Length = 447
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 237/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLRDFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + +K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVANKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVSDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ LET
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALET------ 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
V+R HYR+PI+FT + + +AE L T
Sbjct: 286 -IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDSGELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D NT + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNTANGITVVFEMAKWINSGNYDATVKEALTAMLEVFGIVFVEE----VLDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEVLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|89893193|ref|YP_516680.1| hypothetical protein DSY0447 [Desulfitobacterium hafniense Y51]
gi|219666466|ref|YP_002456901.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
gi|122997351|sp|Q250Q6|SYC_DESHY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781676|sp|B8G1U2|SYC_DESHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|89332641|dbj|BAE82236.1| hypothetical protein [Desulfitobacterium hafniense Y51]
gi|219536726|gb|ACL18465.1| cysteinyl-tRNA synthetase [Desulfitobacterium hafniense DCB-2]
Length = 477
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 172/490 (35%), Positives = 250/490 (51%), Gaps = 55/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NT+ + EF+ + + MY CGPTVY++ H+GN R ++VFD++ R L Y
Sbjct: 1 MALRLFNTMSHQKEEFKPREEGKVGMYTCGPTVYNYFHVGNGRMLVVFDMIRRYLLYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V+N TDIDDKII+R ++E + ++ KD L + +
Sbjct: 61 D--VTFVQNFTDIDDKIIKRGQEEGRD------PLELAQDYIGEYFKDAAALNLMPASIH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HIP+MI +I+ + G AY + ++ F +P YG S R +++ + G RV
Sbjct: 113 PKATDHIPEMIEIIKGLEEQGLAYAVDGDVYFAVDKLPAYGKLSGRTLEDMQAGARVEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS YLG FDIHGGG DL+F
Sbjct: 173 ERKQNPMDFALWKNAKPGEPFWESPWGKGRPGWHIECSAMSLKYLGSGFDIHGGGGDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ E A W+HN FL + +KMSKS GNF T+ E+LE +
Sbjct: 233 PHHENEIAQAEGYLHGETFARYWMHNAFLTINQQKMSKSLGNFFTVREILE-------HF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
P VIR +L THYR P+DF + L A+ L + +
Sbjct: 286 PGEVIRFYLLGTHYRSPLDFDDENLQMAQKGLERLQTSIRLADEALGRQGQNSADAASGQ 345
Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
A+ +D N+ A +L +L + +
Sbjct: 346 KLRAAAEEARREFAEAMDDDFNSALAYASLFELGKAINAHVQAYPYSSEGLLKARATLWE 405
Query: 388 SAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
A +LG ++ K E N+ + +E L++ R I K K + +D IR +L+ G +L
Sbjct: 406 LADVLGFDLAKPANQAEAGNQKLDQVMELLLEVRAIARKKKDWEMSDLIRDRLKDLGIVL 465
Query: 443 EDYKNPDNGQ 452
ED
Sbjct: 466 EDTPQGARWT 475
>gi|77165712|ref|YP_344237.1| cysteine--tRNA ligase [Nitrosococcus oceani ATCC 19707]
gi|254433143|ref|ZP_05046651.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
gi|109894913|sp|Q3J8Y9|SYC_NITOC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|76884026|gb|ABA58707.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani ATCC 19707]
gi|207089476|gb|EDZ66747.1| cysteinyl-tRNA synthetase [Nitrosococcus oceani AFC27]
Length = 485
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 182/506 (35%), Positives = 259/506 (51%), Gaps = 72/506 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L R+ EF I+ +RMYVCG TVYD H+G+AR M+VFD++ R LR E
Sbjct: 1 MLRIYNSLTRRKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDMVVRYLRASGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + ++I +T++ Q +D L L P +P
Sbjct: 61 --VIYVRNITDIDDKIIHRANERG------ESIHTLTARYIQALHEDEASLQILPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + ++ +++ ++ G+AY+ N +I +D S YG+ S R +++ + G RV
Sbjct: 113 RATESMEAILAMVRQLLDQGYAYQGENGDIYYDVSHFEGYGALSGRHLEDLRAGERVQVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + EP WESPWG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 173 EAKTDPLDFVLWKAAKSGEPAWESPWGPGRPGWHIECSAMSIQELGTHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+ L KMSKS GNF T+ E+LE +
Sbjct: 233 PHHENEIAQSEAATGGK-FVNYWMHNGFVRLNDEKMSKSLGNFFTVREVLE-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
V+R +L +HYR P+++T Q+L A+ +++
Sbjct: 285 HPEVLRYFILSSHYRSPLNYTKQQLDTAKAAMTRLYTALRGIPRGEDRASAQGLSWEFTD 344
Query: 346 IIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
DP A+ +D NT A+ L+++ + + L + + ILG
Sbjct: 345 GGDPFVLRFREAMDDDFNTPEALALLNEVRHALNRAREAGDTEKGQSLAVLLRSLGGILG 404
Query: 394 IEVCKEH-------------LNKNISIA-------IEKLVQERLILLKMKKFSSADYIRK 433
+ + IE+LV +R + K K ++ AD IR
Sbjct: 405 LLAHEPEQFLRDSRQVAAIPDTAAAGEEAVLSHDGIEQLVAQRTVARKNKDWAEADRIRG 464
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
L+ +G LED T W++
Sbjct: 465 ILKDQGITLEDT------AAGTLWRR 484
>gi|256855023|ref|ZP_05560384.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
gi|256709536|gb|EEU24583.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T8]
Length = 470
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|294084247|ref|YP_003551005.1| cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
IMCC1322]
gi|292663820|gb|ADE38921.1| Cysteine--tRNA ligase [Candidatus Puniceispirillum marinum
IMCC1322]
Length = 465
Score = 390 bits (1001), Expect = e-106, Method: Composition-based stats.
Identities = 204/485 (42%), Positives = 278/485 (57%), Gaps = 48/485 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K+YNTL R+ EF +DP++I +Y CGPTVYD H+GNARP++VFDVL RLLR Y
Sbjct: 1 MSGLKLYNTLTRQKDEFVPLDPAHIGIYACGPTVYDRIHVGNARPIVVFDVLVRLLRRQY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G VTYVRNITD+DDKII RA + N +I+ + + + F DT L AP
Sbjct: 61 G--TVTYVRNITDVDDKIIARADER------NMSIATLCADTIKSFHADTESLLTKAPDA 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT HI M+ +I+ +I +G AYEA ++F +P YG SRR +D+ G RV
Sbjct: 113 EPRATKHIDGMVAMIKTLIANGFAYEAEGHVLFHVKQMPTYGGLSRRSMDDMIAGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K++ +DFILWK S+ +PGW+SPWGRGRPGWHIECSAMS YLG+VFDIH GGLDLI
Sbjct: 173 APYKRDASDFILWKPSSQAQPGWDSPWGRGRPGWHIECSAMSKFYLGEVFDIHAGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA +K AN W+HNGF+ +EG MSKS G+F+T+ + + +
Sbjct: 233 FPHHENEIAQSCCAHNTDKMANYWLHNGFVTVEGETMSKSTGHFVTVADAVAKHR----- 287
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----IDPAVLSALYN 357
V+R +L HYR P+DF+ +A L + + +D A L L +
Sbjct: 288 --GEVVRYILLSAHYRAPLDFSDHAAFDARNSLDRLYRAVGDVAADETKVDAAFLDCLCD 345
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGI---------------------- 394
DLNT +A+ LH+LAR + K I +SA ++G+
Sbjct: 346 DLNTPAAMARLHELARLANKGDAAAAIALKSSAEVMGLLGQTGDAWGKGEIKDLSSSMTR 405
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
E + + I+ + R + + F+ AD IR +L + G LED
Sbjct: 406 EPTSSAQLEVDNSDIDAKIAARNVARNRRDFAEADRIRDELAADGIHLEDT------AEG 459
Query: 455 TRWKQ 459
T W++
Sbjct: 460 TIWRR 464
>gi|315498776|ref|YP_004087580.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
gi|315416788|gb|ADU13429.1| cysteinyl-tRNA synthetase [Asticcacaulis excentricus CB 48]
Length = 463
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 191/481 (39%), Positives = 257/481 (53%), Gaps = 42/481 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+++ +TL+R +F +P + MYVCGPTVY++AHIGNARP++VFDVL+RLLRY YG
Sbjct: 1 MKLRLSDTLKRHKVDFVPKNPQRVTMYVCGPTVYNYAHIGNARPVVVFDVLFRLLRYIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E+ V Y RNITD+DDKI ++A E I +ITSK + D L L PT Q
Sbjct: 61 EEAVIYARNITDVDDKINQKAMAEGVD------IDVITSKFADIYNADMRALNALEPTIQ 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++ I +I +GHAY A ++FD S YG+ S R +D+ G RV
Sbjct: 115 PRVTQNMSAIVAQIAALIRNGHAYAAEGHVLFDVESYRAYGALSNRSLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM LG DIHGGG DLIF
Sbjct: 175 PYKKNPQDFVLWKPSKPGEPKWPSPWGEGRPGWHIECSAMIEANLGLPIDIHGGGHDLIF 234
Query: 243 PHHENEIAQSCCADRIEKTA-----NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
PHHENEIAQ CA W+HNGFL ++ KMSKS GN + +++L+
Sbjct: 235 PHHENEIAQGVCAQHGHSHQEESYARYWMHNGFLTMDAEKMSKSLGNVLLVHDLI----- 289
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPA 350
+ +P VIRLA+L HYR P+D+ L + L + + A
Sbjct: 290 --KEFPGEVIRLALLSAHYRAPLDWNSDLLVQTRKRLDGLYEALRKAANVPVVETAVPEA 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEH----- 400
V+ AL +DL+T + L LA K A+ ++GI +
Sbjct: 348 VIDALCDDLSTPRVLAELSALASALEKASQSEKPLAKAQLLAAGALMGILQQEAESWFKG 407
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ ++S +E L+ R K ++ AD IR +L + + D G WK
Sbjct: 408 GADDDLSAKVETLLIARKTARAEKNWAEADRIRNELTALNVEVMD------GPEGATWKL 461
Query: 460 K 460
K
Sbjct: 462 K 462
>gi|126660010|ref|ZP_01731132.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126618688|gb|EAZ89435.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 482
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 173/502 (34%), Positives = 249/502 (49%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL RK F I+ ++MY CG TVYD+ H+G+AR I++DV+ R L+++
Sbjct: 1 MTLTVYNTLTRKKEPFTTIEEGKVKMYCCGITVYDYCHLGHARTCIIWDVVRRYLQWHGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTY++N TDIDDKI+ RAR+E + + ++ + + + +D RL
Sbjct: 61 --NVTYIQNFTDIDDKILNRARKEKTT------MEAVSERFIEAYFEDMERLGVQKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + L+ + G+AY +N ++ ++ YG S RK+++ +
Sbjct: 113 PRATHTLNGIQRLVSELEAKGYAYASNGDVYYNVHQFKPYGKLSGRKLEDLQAGASGRVN 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
E KK+PADF +WK + P EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 LEDSEASKKKDPADFAVWKSAKPGEPAWDSPWGKGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI ELLE
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-QPLARYWLHNGMVKVGGEKMSKSLGNFTTIRELLE--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
+RL +L HYR+P+DFT + L A
Sbjct: 289 ----KIDPMAVRLFILQAHYRKPVDFTDEALAAATNGWQTLSEGLLFGFQHGTTLGFKGD 344
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
+A+ +D N + L ++A+E K +LL
Sbjct: 345 MLELLPKFVKRFNNAVDDDFNFAGGLAVLFEIAKELRKEGNLLVHQGNTETNSEILEKQW 404
Query: 384 -IFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQLES 437
A +LG+E + L S AIE L+++R K K F+ +D IR +L+
Sbjct: 405 YTLRTLASVLGLEADRNQLQSEPSDGLNDTAIETLIEQRKEARKNKNFAESDRIRDELKE 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
+G IL D T W +
Sbjct: 465 QGIILVDQPGGL-----TSWHR 481
>gi|332359942|gb|EGJ37756.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1056]
Length = 450
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 158/469 (33%), Positives = 235/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMTRSLREFMPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D + L T
Sbjct: 61 GFE--VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 QHPRVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEMSHNYAKLANKTLADLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGII 347
++ V+R HYR+PI+FT + + +A L T
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLKAF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKN 404
+A+ D N + I + +LA+ + + F + GI +E
Sbjct: 345 LDKFTTAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L++ER + F++AD IR +L +G L D K+ R
Sbjct: 401 LEADIERLIEERQEARANRDFATADRIRDELADQGIKLLDTKDGVRWTR 449
>gi|209363819|ref|YP_001423944.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212212147|ref|YP_002303083.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212219210|ref|YP_002305997.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
gi|215919193|ref|NP_820470.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|218511865|sp|Q83BL7|SYC_COXBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|206584077|gb|AAO90984.2| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 493]
gi|207081752|gb|ABS78112.2| cysteinyl-tRNA synthetase [Coxiella burnetii Dugway 5J108-111]
gi|212010557|gb|ACJ17938.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuG_Q212]
gi|212013472|gb|ACJ20852.1| cysteinyl-tRNA synthetase [Coxiella burnetii CbuK_Q154]
Length = 460
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 172/475 (36%), Positives = 251/475 (52%), Gaps = 40/475 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI+N+L ++ F+ I+ +++YVCG TVYD+ HIG+ R I+FD++ R LR
Sbjct: 1 MSVKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+VRNITDIDDKII+RA + ++ + + + Q +D L L+P +
Sbjct: 61 E--VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++P++I LIQ ++ + +AY N ++ FD +YG S R +DE + G RV
Sbjct: 113 PRATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS LG+ FDIHGGGLDL
Sbjct: 173 SDSKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLK 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + +W+H G L + KMSKS GN I+I E L +
Sbjct: 233 FPHHENEIAQSE-AGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KE 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLS 353
V+R +L HYR P+ ++ + L + L ++
Sbjct: 285 SDVEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH---- 400
A+ +D NT A L ++ RE + D L +I G+
Sbjct: 345 AMDDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQ 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I+KL+ +R K + +AD IR QL G +ED + + ++
Sbjct: 405 GAKKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSWRQ 459
>gi|167648484|ref|YP_001686147.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
gi|189082061|sp|B0T101|SYC_CAUSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|167350914|gb|ABZ73649.1| cysteinyl-tRNA synthetase [Caulobacter sp. K31]
Length = 462
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 267/480 (55%), Gaps = 41/480 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+Y+T+ R+ +F DP + MYVCGPTVY+ AHIGN RP++VFDVL+RLLR+ YG
Sbjct: 1 MTLKLYDTMAREKRDFVPADPGRVTMYVCGPTVYNHAHIGNFRPVVVFDVLFRLLRHVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y RN+TD+DDKI +A E I +IT + + +D L L P+ +
Sbjct: 61 EDAVVYARNVTDVDDKINAKATAEGVE------IKVITDRYLAAYHEDAAALLTLPPSLE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT H+ +I +I ++ +G AY A ++FDT + P+YG S R +D+ G RV
Sbjct: 115 PKATEHMGPIIEMIGELVANGSAYAAEGHVLFDTQAFPDYGQLSGRDLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK S EP W+SPWG GRPGWHIECSAM LG+ DIHGGG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWDSPWGAGRPGWHIECSAMIDKTLGQTIDIHGGGIDLAF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA AN W+HNGFL++ G KMSKS GN I +ELL ++
Sbjct: 235 PHHENELAQSRCAHGAPVLANYWLHNGFLDMAGEKMSKSLGNVIIPHELL-------KTT 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------ 356
P IR A+L HYR+P+D+T + + +++ L + ++
Sbjct: 288 PGEAIRWALLSGHYRQPLDWTPELIEQSKKALDRLYGALRRAKTVEAGESEPSDEVMAAL 347
Query: 357 -NDLNTVSAIQALHKLARESTK---NHDLLPI------FNASAHILGIEVCKE------H 400
+DLNT A+ +L+ + D L I ASA +LG
Sbjct: 348 SDDLNTPLAVSGFFELSSAIERAVTAGDELAITANKGRLLASAGLLGFLQADPDSWFEGD 407
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ ++ +E L+ R+ K +++AD IR ++++ G ++ D G W+ K
Sbjct: 408 ADDDLKAKVEDLLARRIAARTAKDWTAADAIRAEIDALGVVVMD------GPAGATWRMK 461
>gi|324996026|gb|EGC27937.1| cysteine--tRNA ligase [Streptococcus sanguinis SK678]
Length = 447
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTTLGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDA 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
SA+ D N + I + +LA+ + + F + GI +E +
Sbjct: 345 FTSAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQMARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|262281989|ref|ZP_06059758.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
gi|262262443|gb|EEY81140.1| cysteinyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
Length = 450
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 159/469 (33%), Positives = 237/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D T L T
Sbjct: 61 GFE--VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVTALGVKPAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + +I +++++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RHPRVVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGII 347
++ V+R HYR+PI+FT + + +A L T
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKN 404
+A+ D N + I + +LA+ + ++ F + GI +E
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L++ER + + F++AD IR L ++G L D K+ R
Sbjct: 401 LDADIERLIEERQVARANRDFATADRIRDDLAAQGIKLLDTKDGVRWTR 449
>gi|256618484|ref|ZP_05475330.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256598011|gb|EEU17187.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
Length = 470
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKTFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|153209422|ref|ZP_01947398.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165919402|ref|ZP_02219468.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
gi|187629807|sp|A9KBJ2|SYC_COXBN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120575359|gb|EAX31983.1| cysteinyl-tRNA synthetase [Coxiella burnetii 'MSU Goat Q177']
gi|165916918|gb|EDR35522.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 334]
Length = 458
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 172/473 (36%), Positives = 251/473 (53%), Gaps = 40/473 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+N+L ++ F+ I+ +++YVCG TVYD+ HIG+ R I+FD++ R LR E
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRNITDIDDKII+RA + ++ + + + Q +D L L+P +PR
Sbjct: 60 -VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++P++I LIQ ++ + +AY N ++ FD +YG S R +DE + G RV
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDELQAGARVEVSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + +W+H G L + KMSKS GN I+I E L +
Sbjct: 233 HHENEIAQSE-AGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KESD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSAL 355
V+R +L HYR P+ ++ + L + L ++ A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH------ 400
+D NT A L ++ RE + D L +I G+
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I+KL+ +R K + +AD IR QL G +ED + + ++
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSWRQ 457
>gi|90962221|ref|YP_536137.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
gi|123269889|sp|Q1WSS5|SYC_LACS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|90821415|gb|ABE00054.1| Cysteinyl-tRNA synthetase [Lactobacillus salivarius UCC118]
Length = 470
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 171/492 (34%), Positives = 258/492 (52%), Gaps = 60/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL + +F+ ++P + MYVCGPTVY++ HIGNAR + FD + R L Y E
Sbjct: 1 MLQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ +++ +N ++ IT K F +DT+ L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
R +++ +I I+ ++ G+AYE+ ++ + T +YG S + ID+ +
Sbjct: 113 RVMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDD 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ K++P DF LWK+ E W SPWG+GRPGWHIECS MS+ YLG DIH GG D
Sbjct: 173 IDQDKKQDPLDFALWKKVKQGEISWNSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K A W+HNGF+ + E +KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ VIR M T YR PI ++ L EA++ L+K +
Sbjct: 287 --KKVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDK 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ + + +D N + I ++++A++ + L+ +
Sbjct: 345 EVEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI +E + + IE+L+QER K K F +D IR L+ +G ILED
Sbjct: 405 VVEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT-- 460
Query: 448 PDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 461 ----AQGTRWKR 468
>gi|254480424|ref|ZP_05093671.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
gi|214039007|gb|EEB79667.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2148]
Length = 458
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 196/474 (41%), Positives = 274/474 (57%), Gaps = 38/474 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT+ EF+ + + MYVCGPTVY+ AHIGNARP++VFD L+RLL+ YG
Sbjct: 1 MSLKIYNTMSGAKEEFEPLVADTVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTQYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTY RNITD+DDKII A++ + +I +T + T ++ +D +L L P+ +
Sbjct: 61 --SVTYARNITDVDDKIIAAAKE------GDRSIESVTDEYTAKYREDMAQLNALPPSLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT++I MI L +I GHAYE+ ++F S+ +YG S R ID+ G RV
Sbjct: 113 PHATHNIDAMIELTSTLIEKGHAYESQGHVLFAVESMEDYGKLSNRSIDDMLAGARVQVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + +PGW+SPWGRGRPGWH+ECSAM +LG+ DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPADITDPGWDSPWGRGRPGWHLECSAMIRAHLGETIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + W+HN +L+++G KMSKS GNF T+ +LL +S+
Sbjct: 233 PHHENEIAQSRCAHGGD-YVKYWMHNAYLDIDGEKMSKSLGNFRTVRDLL-------QSY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DPAVLS 353
V+R A+L HYR P++F+V+ L +A L + T + D
Sbjct: 285 RGEVLRFALLSAHYRSPLNFSVELLEQARSNLDGFYGTLREVADMEIDVDVPLADEPFYQ 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGIEVCKEHL------- 401
AL +DLNT AI LH LA++ K L A+ ++LGI
Sbjct: 345 ALNDDLNTPLAIAELHALAKQLNKAAAEDKPQLKARIIAAGNLLGILGQDPEEWLQGDAA 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + AIE L+QER+ + F+ AD IR L ++G +LED + +R
Sbjct: 405 ADAISAEAIETLIQERVDAKANRNFARADEIRDSLLAEGVVLEDSREGTQWKRG 458
>gi|14521604|ref|NP_127080.1| cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878786|sp|Q9UYV2|SYC_PYRAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|5458823|emb|CAB50310.1| cysS cysteinyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 477
Score = 389 bits (1000), Expect = e-106, Method: Composition-based stats.
Identities = 187/495 (37%), Positives = 252/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNTL RK E + + +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MGIKVYNTLTRKKEELKPLRDGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII+RA++ + + + + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIKRAQETG------EDPGKLAERFIKVFLEDMNALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I I+ + G+AYE ++ + F+ +YG S KI+E + G RV
Sbjct: 113 PRVTEHIDDIIEFIKKLKEKGYAYEGSDGVYFEVQKFKDYGKLSGVKIEELRKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E W+H GF+ ++G KMSKS GNF+T+ ELL + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVRYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
VIRL +L HYR P+D+T + L A+ L +
Sbjct: 285 SPEVIRLFVLQKHYRSPLDYTEEGLQHAKNNLERLYNTLENIRIAMRNAELSYKWSEKDF 344
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ K L F
Sbjct: 345 EAYEAIREARKKFYDAMDDDFNTAEALKAVFEVSNAINKYILEVDKPKESILRKALEFFK 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ + GI + KE IE LV+ R L K K+F AD IR++L G LED
Sbjct: 405 VVSEVFGIFEDYFKEEKKGEEEKLIELLVEVRKQLRKEKRFDLADKIREELRKLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 KG------QETVWKR 473
>gi|256761895|ref|ZP_05502475.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256683146|gb|EEU22841.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T3]
Length = 470
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAVANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|187631655|sp|Q11JR3|SYC_MESSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 497
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 246/491 (50%), Positives = 323/491 (65%), Gaps = 33/491 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +K+YNTL R+ EF +DP+N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR YG
Sbjct: 6 KALKLYNTLTRRDEEFVPLDPANVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRQLYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPS------IPINDAISIITSKNTQQFVKDTTRLAC 116
+ VTYVRNITD+DDKI RA ++ + +N+AI +T + QF D L C
Sbjct: 66 DDHVTYVRNITDVDDKINARALRDFGEDITAGRLTLNEAIRRVTERTAAQFHADVAALGC 125
Query: 117 LAPTHQPRATNHIPQ-------MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
LAPTH+PRAT + M LIQ +I GHAY A EI+FDT+S+P+YG S+R+
Sbjct: 126 LAPTHEPRATEFVLPRTDGKADMASLIQTLIDRGHAYAAKGEILFDTASMPDYGQLSKRR 185
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR--------GRPGWHIECSA 221
+++Q+ G RV HK+NP+DF+LWK S+ EPGWE + GRPGWHIECSA
Sbjct: 186 LEDQQAGARVAVDPHKRNPSDFVLWKESSAEEPGWEGRFTFEGKPLVIRGRPGWHIECSA 245
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS+ YLG+VFDIHGGGLDLIFPHHENEIAQS CA AN W+HNGF+ +EG+KM+KS
Sbjct: 246 MSAAYLGEVFDIHGGGLDLIFPHHENEIAQSRCAHGTPVMANYWLHNGFVQVEGKKMAKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF+TI++LL T+ FGGR WP V+RLA+LMTHYREP+DF++++L EAE +L W +
Sbjct: 306 EGNFVTIHDLLATENFGGRKWPGEVLRLAILMTHYREPLDFSLRKLEEAEAVLDGWYRVV 365
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-FNASAHILGIEVC 397
+ AV AL +DL T +AI LH L ++ + + A+A +LG+
Sbjct: 366 GDAKHQEGDSGAVRRALLDDLGTPAAITVLHDLRAQAARGSEAAKADLKANAVLLGLLTQ 425
Query: 398 KEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ A+E+ V RL LL+ K F AD IR++L +G L DYK+P+
Sbjct: 426 SQDQWFSGKAADAAIDEAAVEERVAARLSLLRAKNFPEADRIREELSGRGIQLMDYKDPE 485
Query: 450 NGQRMTRWKQK 460
G+R T+W+ K
Sbjct: 486 TGERRTKWEVK 496
>gi|300114660|ref|YP_003761235.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
gi|299540597|gb|ADJ28914.1| cysteinyl-tRNA synthetase [Nitrosococcus watsonii C-113]
Length = 495
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 188/516 (36%), Positives = 265/516 (51%), Gaps = 82/516 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L RK EF I+ +RMYVCG TVYD H+G+AR M+VFDV+ R LR E
Sbjct: 1 MLRIYNSLTRKKEEFIPIESGKVRMYVCGMTVYDLCHVGHARVMVVFDVVARYLRASGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA ++ ++I +T++ Q +D L L P +P
Sbjct: 61 --VMYVRNITDIDDKIIHRANEKG------ESIHALTARYIQALHEDEASLQILPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT + ++ +++ ++ G+AY+ N +I +D S YG+ S + +++ + G RV
Sbjct: 113 RATESMEAILAMVRQLLEQGYAYQGENGDIYYDVSHFEGYGALSGKHLEDLRAGERVQVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP WESPWG GRPGWHIECSAMS LG FDIHGGG DL F
Sbjct: 173 EAKTDPLDFVLWKAAKPDEPAWESPWGPGRPGWHIECSAMSIQELGVHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + N W+HNGF+ L+ KMSKS GNF T+ E+LE +
Sbjct: 233 PHHENEIAQSEAATGSK-FVNYWMHNGFVRLDDEKMSKSLGNFFTVREVLE-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
V+R +L +HYR P++++ Q+L A+ +++
Sbjct: 285 HPEVLRYFILSSHYRSPLNYSKQQLDTAKAAMTRLYTALRGIPRGDDRASAQGLSWEFVD 344
Query: 346 IIDPAVL---SALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILG 393
DP +L A+ +D NT A+ L+++ K L + A ILG
Sbjct: 345 GEDPFILRFREAMDDDFNTPEALALLNEVRHALNRARKGGDTEKGQSLAVLLRALGGILG 404
Query: 394 IEVCKEH----------------------LNKNISIA--------IEKLVQERLILLKMK 423
+ + L S IE+LV +R + K K
Sbjct: 405 LLAHEPEQFLRDPRQMVVVSDTAKTTSLSLTSQTSTEKVVLSHDGIEQLVAQRTVARKNK 464
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ AD IR L+ +G LED T W++
Sbjct: 465 DWAEADRIRGILKDQGITLEDT------AAGTLWRR 494
>gi|327460677|gb|EGF07012.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1]
gi|327488752|gb|EGF20551.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1058]
Length = 447
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTTLGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F +Y + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHDYAKLANKTLADLELGASGRTNE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + + F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|256960771|ref|ZP_05564942.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256951267|gb|EEU67899.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Merz96]
Length = 470
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|310644226|ref|YP_003948985.1| translation initiation factor if-1 [Paenibacillus polymyxa SC2]
gi|309249177|gb|ADO58744.1| Translation initiation factor IF-1 [Paenibacillus polymyxa SC2]
Length = 467
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 166/491 (33%), Positives = 250/491 (50%), Gaps = 57/491 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT+ R F ++P ++MYVCGPTVYD+ HIGNARP+IVFDV+ L Y
Sbjct: 1 MSLQIYNTMTRSREPFVPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I +AR+ + +P + K + +D L A +
Sbjct: 61 D--VNYVVNFTDVDDKLIRKARELNMEVP------AVAEKFIAAYHEDLAGLNVPAASIN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I++++ G+AYE + ++ + T +YG S + ++E + G R+
Sbjct: 113 PRVTESMDLIIDFIKDLVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N DF+LWK + P E W SPWG GRPGWHIECSAM+ HYLG DIHGGG DL F
Sbjct: 173 ERKENAEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E AQS + + W+HNG++ ++ KMSKS GN I + +L K
Sbjct: 233 PHHECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRARHK------ 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
+R ML THYR P+++ + +++AE + +
Sbjct: 286 -PEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLAIALKGNEEVSAEL 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
I + +D NT AI A+ + E+ + +L F++
Sbjct: 345 QMKLDGILQQFGEKMDDDFNTPDAITAVFEWVSEANLLLQRDVVNQAELQAVLHTFHSMN 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+L + E + + +E+L+ ER+ K K + AD IR L +KG +LED
Sbjct: 405 TVL--RIYSEPSEELLDGEVEQLIAERVEARKTKNWGRADEIRDLLATKGIVLEDT---- 458
Query: 450 NGQRMTRWKQK 460
+ RW++K
Sbjct: 459 --AQGMRWRRK 467
>gi|325686898|gb|EGD28923.1| cysteine--tRNA ligase [Streptococcus sanguinis SK72]
Length = 450
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 159/469 (33%), Positives = 238/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D T L + T
Sbjct: 61 GFE--VNYISNFTDVDDKIIHRAKKEGIT------PKEVADKYIAAFHEDVTALGVKSAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 QHPRVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GII 347
++ V+R HYR+PI+FT + + +A L T
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYDQPFTGQADSAQFQAF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKN 404
+A+ D N + I + +LA+ + ++ + GI +E
Sbjct: 345 LDKFTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAALAELLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 LDADIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 449
>gi|224457829|ref|ZP_03666302.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
MA00-2987]
Length = 459
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 175/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 61 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ N ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K + AD IR QL+ +G ILED T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSAT------GTTWKK 458
>gi|325689003|gb|EGD31011.1| cysteine--tRNA ligase [Streptococcus sanguinis SK115]
Length = 447
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTTLGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F +Y + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTNE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + + F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAQVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|255974563|ref|ZP_05425149.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
gi|257087877|ref|ZP_05582238.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
gi|255967435|gb|EET98057.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256995907|gb|EEU83209.1| cysteinyl-tRNA synthetase [Enterococcus faecalis D6]
Length = 470
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|71280239|ref|YP_270455.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
gi|109894893|sp|Q47XL5|SYC_COLP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71145979|gb|AAZ26452.1| cysteinyl-tRNA synthetase [Colwellia psychrerythraea 34H]
Length = 469
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 166/490 (33%), Positives = 242/490 (49%), Gaps = 56/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R+ F I+ + +YVCG TVYD HIG+ R I FD + R LR+ +
Sbjct: 1 MLQIYNTLSRQKETFTPINAGKVGLYVCGCTVYDLCHIGHGRTYISFDNIARYLRFSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD++DKII RA + N+ +T + +D L P +P
Sbjct: 61 --VNYVRNITDVEDKIINRANEN------NETTEALTERTIAAMHQDFDSLNMARPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY--------EANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
R T H+ ++I +I+ ++ HAY +++FD SS +YG S + +++ +
Sbjct: 113 RVTTHMNEIIAMIETLVTKEHAYVAGANAASTGQGDVLFDVSSYNDYGKLSGQNLEQLQS 172
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G+RV +K NP DF+LWK + P EP W SPWG GRPGWHIECSAM++ LG FDIHG
Sbjct: 173 GSRVEVDQNKNNPLDFVLWKSAKPGEPSWSSPWGEGRPGWHIECSAMNAKELGHHFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHENEIAQSCCA N W+H G + ++ KMSKS GNF TI ++L
Sbjct: 233 GGSDLTFPHHENEIAQSCCALNT-PYVNYWMHTGMVQVDQEKMSKSLGNFFTIRDVLA-- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSK 344
+ A +R + HYR ++++ LT+A + +
Sbjct: 290 -----QYDAETVRFFLTTGHYRSQLNYSTDNLTQARASVERIYTSLRDVNIESDYVINKD 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHILGIE 395
A+ +D NT A+ L ++++E DL A I+G+
Sbjct: 345 SSFVKQFCQAMDDDFNTPQALAVLFEISKELNVAKAAANNALAIDLASTLVALGEIVGLL 404
Query: 396 VCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + IE L+ +R K ++ AD R +L + +LED
Sbjct: 405 QLDPAAFLQGDNDNDEVAIIEALIVQRNQARIDKDWAMADDARDKLNAMNIVLEDS---- 460
Query: 450 NGQRMTRWKQ 459
T W++
Sbjct: 461 --AGKTTWRK 468
>gi|293364920|ref|ZP_06611637.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307703173|ref|ZP_07640119.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
gi|291316370|gb|EFE56806.1| cysteine--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307623248|gb|EFO02239.1| cysteinyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
Length = 447
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVSFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PLEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + +++ G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVTDLVEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N+ + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|312903154|ref|ZP_07762335.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|310633545|gb|EFQ16828.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|315163378|gb|EFU07395.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|315578631|gb|EFU90822.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0630]
Length = 478
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIGVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|324992446|gb|EGC24367.1| cysteine--tRNA ligase [Streptococcus sanguinis SK405]
gi|327462791|gb|EGF09113.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 447
Score = 389 bits (999), Expect = e-106, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVCRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQAESAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTSEVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|187931126|ref|YP_001891110.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
gi|229558635|sp|B2SFH9|SYC_FRATM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187712035|gb|ACD30332.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 459
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 175/478 (36%), Positives = 251/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNIT+IDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 61 TLVRNITNIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ AN ++ + + +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMVAMIETLIKKGYAYQGANGDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGNTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K ++ AD IR QL+ +G ILED T WK+
Sbjct: 407 DGADASEIEKLIAERTQAKKDKNYARADEIRNQLQQQGIILEDSAT------GTTWKK 458
>gi|88705054|ref|ZP_01102766.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
gi|88700749|gb|EAQ97856.1| Cysteinyl-tRNA synthetase [Congregibacter litoralis KT71]
Length = 462
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 198/481 (41%), Positives = 277/481 (57%), Gaps = 46/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNT + F+ + P+ + MYVCGPTVY+ AHIGNARP++VFD L+RLL+ Y
Sbjct: 1 MDLQLYNTRAKTKEVFRPLSPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTRY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI+ A+++ AI +I + T ++ +DT +L L PT +
Sbjct: 60 -DEVVYARNITDIDDKIMLAAKEQGV------AIDVIAKEFTDKYREDTAQLNALPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT++I MI L + +I GHAY + ++F +S+ NYG S R +D+ G RV
Sbjct: 113 PHATDNIGPMIALTEKLIEKGHAYASEGHVLFAVTSMENYGQLSGRSLDDMLAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ EPGW+SPWGR RPGWH+ECSAM +LG DIHGGG DLIF
Sbjct: 173 DYKRHPGDFVLWKPSSDDEPGWDSPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA E +W+HN FL+++G KMSKS GN TI ELL +
Sbjct: 233 PHHENELAQSCCAFGDE-FVRVWMHNAFLDMDGEKMSKSLGNVATIRELLTR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLS 353
V+R A+L HYR P++F+ L +AE L+ + T S I+ A S
Sbjct: 285 RGEVLRFALLSAHYRSPLNFSEALLAQAEQTLTNFYNTLRSVQHIELDEDVPLEGEAFYS 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKE--------- 399
AL +DLNT AI LH LAR+ K + L A+ ++LG+
Sbjct: 345 ALCDDLNTPLAISELHALARDINKAAEDDKPQLKARLLAAGNLLGVLQHDPLEWLQGDSA 404
Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + A++ L+ ER K ++ AD IR++L + G +LED T W+
Sbjct: 405 STDSSLDADAVDALIAERAAAKADKNYARADGIREELTAAGIVLEDS------AGGTLWR 458
Query: 459 Q 459
+
Sbjct: 459 R 459
>gi|257418802|ref|ZP_05595796.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
gi|257160630|gb|EEU90590.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T11]
Length = 470
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEACKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|56708635|ref|YP_170531.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110671107|ref|YP_667664.1| cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|254371268|ref|ZP_04987270.1| hypothetical protein [Francisella tularensis subsp. tularensis
FSC033]
gi|254875501|ref|ZP_05248211.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|61216126|sp|Q5NEL1|SYC_FRATT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123063359|sp|Q14G14|SYC_FRAT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56605127|emb|CAG46249.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
SCHU S4]
gi|110321440|emb|CAL09632.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
FSC198]
gi|151569508|gb|EDN35162.1| hypothetical protein FTBG_01042 [Francisella tularensis subsp.
tularensis FSC033]
gi|254841500|gb|EET19936.1| cysS, cysteinyl-tRNA synthetase [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159873|gb|ADA79264.1| Cysteinyl-tRNA synthetase [Francisella tularensis subsp. tularensis
NE061598]
Length = 464
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 175/478 (36%), Positives = 249/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 8 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 65
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +PRAT
Sbjct: 66 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPRAT 119
Query: 127 NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+M+ +I+ +I G+AY+ N ++ + + +YG S++ ++ + G+RV K
Sbjct: 120 ETIPEMVAMIETLIKKGYAYQGANSDVFYRVTKFADYGKLSKQNLEALQQGSRVDVVEEK 179
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 180 ENPMDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 239
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 240 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 291
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + + + + A
Sbjct: 292 VVRYFLASTVYRSEINYSKENLENAKASVERLFNALRDIEPIEVNLPDDASEYEEKFIKA 351
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 352 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 411
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IEKL+ ER K K + AD IR QL+ +G ILED T WK+
Sbjct: 412 DGADASEIEKLIAERTQAKKDKNYVRADEIRNQLQQQGIILEDSAT------GTTWKK 463
>gi|227518065|ref|ZP_03948114.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|256964025|ref|ZP_05568196.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|257084048|ref|ZP_05578409.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|227074501|gb|EEI12464.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|256954521|gb|EEU71153.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|256992078|gb|EEU79380.1| cysteinyl-tRNA synthetase [Enterococcus faecalis Fly1]
Length = 470
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|322374782|ref|ZP_08049296.1| cysteine--tRNA ligase [Streptococcus sp. C300]
gi|321280282|gb|EFX57321.1| cysteine--tRNA ligase [Streptococcus sp. C300]
Length = 447
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|227555727|ref|ZP_03985774.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|227175132|gb|EEI56104.1| cysteinyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|315573949|gb|EFU86140.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|315581900|gb|EFU94091.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0309A]
Length = 478
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|319790489|ref|YP_004152122.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114991|gb|ADU97481.1| cysteinyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 472
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 200/487 (41%), Positives = 265/487 (54%), Gaps = 53/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+ NTL + EF+ ++ ++MYVCGPTVYD AHIG+AR +VFDV+ R L Y
Sbjct: 1 MIKVTNTLTERKEEFKPLEGKTVKMYVCGPTVYDHAHIGHARSAVVFDVIRRWLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +VRN TD+DDKII+R+++E ++ K + +D L PT++P
Sbjct: 60 -RVIFVRNYTDVDDKIIKRSKEEGI------PWYEVSKKYIASYEEDMEALNVKEPTYKP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HI ++I +I +I GHAYEA+ ++ F S P YG S+RK +E G RV
Sbjct: 113 KVTEHIREIIEMIDGLIQKGHAYEADGDVYFSVESFPEYGKLSKRKTEELLAGARVEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+S EPGWESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFP
Sbjct: 173 KKKNPLDFALWKKSKEGEPGWESPWGVGRPGWHIECSAMSMKYLGETIDIHGGGFDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + A WIHNGF+ + KMSKS GNF TI E+L + +
Sbjct: 233 HHENEIAQSESYTG-KTFARYWIHNGFVMVNREKMSKSLGNFFTIKEIL-------KQFS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS---------- 353
+RL +L THYR PIDFTV+RL EAE L + S ++
Sbjct: 285 PDTLRLFLLSTHYRSPIDFTVERLKEAERALKRLTTFIESVKAVEKLPEEGEKGEPIDVE 344
Query: 354 --------ALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNA------ 387
A+ +D NT A+ AL++L + + D + +A
Sbjct: 345 SARREFEAAMDDDFNTAKALGALYELVKRANTLKDKALKRQKITPSERESLVDAARFTEN 404
Query: 388 SAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ LG ++ +E + A IE L+Q R L K K+F AD IR +L+ G LED
Sbjct: 405 ALKTLGFKLEREQSEGGLEEALIELLIQVRGELRKKKEFQLADLIRDRLKELGITLEDLP 464
Query: 447 NPDNGQR 453
+R
Sbjct: 465 TGTVYRR 471
>gi|308070997|ref|YP_003872602.1| Cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Paenibacillus
polymyxa E681]
gi|305860276|gb|ADM72064.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Paenibacillus
polymyxa E681]
Length = 467
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/491 (34%), Positives = 251/491 (51%), Gaps = 57/491 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT+ R F ++P ++MYVCGPTVYD+ HIGNARP+IVFDV+ L Y
Sbjct: 1 MPLQIYNTMTRSREPFAPLEPGKVKMYVCGPTVYDYIHIGNARPVIVFDVVRSYLEYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I +AR+ ++ +S + K + +D L A +
Sbjct: 61 D--VNYVVNFTDVDDKLIRKARE------LDMDVSAVAEKFIAAYYEDLAGLNVPAASMN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I+ ++ G+AYE + ++ + T +YG S + ++E + G R+
Sbjct: 113 PRVTESMDLIIDFIKELVDKGYAYENDGDVFYRTKKFKDYGQLSGQNLEELQFGIRINVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N DF+LWK + P E W SPWG GRPGWHIECSAM+ HYLG DIHGGG DL F
Sbjct: 173 ERKENAEDFVLWKAAKPGEIHWSSPWGDGRPGWHIECSAMARHYLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E AQS + + W+HNG++ ++ KMSKS GN I + +L K
Sbjct: 233 PHHECECAQSEVITG-KPLSRYWMHNGYIRIDNEKMSKSLGNGILVKDLRAHHK------ 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
+R ML THYR P+++ + +++AE + +
Sbjct: 286 -PEALRYFMLSTHYRNPLNYNQETMSQAENSVERIANAVANVKHRLANALEGNGEVSTEL 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
T I + +D NT AI A+ E+ + +L F++
Sbjct: 345 QTKLDGILQQFGEKMNDDFNTPDAITAVFDWVSEANHLLQRDVVHQAELQAVLHTFHSMN 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+L + E + + IE+L+ ER+ K K +S AD IR L +KG +LED
Sbjct: 405 SVL--RIYSEPSEELLDDEIEQLIAERVEARKTKNWSRADEIRDLLAAKGIVLEDT---- 458
Query: 450 NGQRMTRWKQK 460
+ RW++K
Sbjct: 459 --AQGMRWRRK 467
>gi|307296635|ref|ZP_07576455.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|306495971|gb|EFM65559.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|315029626|gb|EFT41558.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4000]
Length = 478
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEELG---DAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|257417468|ref|ZP_05594462.1| cysteinyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
gi|300862011|ref|ZP_07108091.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|257159296|gb|EEU89256.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
gi|295112378|emb|CBL31015.1| cysteinyl-tRNA synthetase [Enterococcus sp. 7L76]
gi|300848536|gb|EFK76293.1| cysteine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
Length = 470
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|229824608|ref|ZP_04450677.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
gi|229785979|gb|EEP22093.1| hypothetical protein GCWU000282_01955 [Catonella morbi ATCC 51271]
Length = 480
Score = 389 bits (998), Expect = e-106, Method: Composition-based stats.
Identities = 171/495 (34%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL R+ F+ I + YVCGPTVY++ HIGNAR + FD + R +Y
Sbjct: 7 MAIQVYNTLTRQKEVFRPIKEGQVAFYVCGPTVYNYIHIGNARSAVAFDTIRRYFQYRGY 66
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDKII+ A E + I K F +DT +L A T
Sbjct: 67 Q--VNYVSNFTDVDDKIIKAAIAEGST------PEAIADKYIAAFKEDTGQLNIQAATVH 118
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +I ++I +Q +I G+AYE+ ++ F T S +YG S + +++ +G
Sbjct: 119 PRVMENIEEIIAFVQTLIEKGYAYESEGDVYFKTESFKDYGHLSDQSLEDLLVGASERLD 178
Query: 183 ----YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K NP DF LWK + P E W+SPWG GRPGWHIECS M++ YLG DIHGGG
Sbjct: 179 QAVAERKANPLDFALWKTAKPGEIAWDSPWGPGRPGWHIECSVMATKYLGDTIDIHGGGQ 238
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS A+ W+HNGF+ + + KMSKS GNF+ + +LL
Sbjct: 239 DLTFPHHENEIAQSEACTG-HTFAHYWLHNGFVTIGKQDEKMSKSLGNFVLLRDLLAA-- 295
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
+ VIR + THYR P+ + +TEA+ ++K +
Sbjct: 296 -----YDPMVIRYMLATTHYRRPLRYDEAVITEAQANVNKLREAIRRLKHRQEQASADLE 350
Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
I ++A+ +D N + I AL L + + DL +
Sbjct: 351 GHETWLAEINGIQEQFVTAMDDDFNASNGITALFDLVKSLNRYLDLELVSQVVLSLYDKV 410
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ + G+++ E + +I IE L++ER K F+ +D IR QL+ +G +L+D
Sbjct: 411 LHDLLAVFGLDL--EDKSNSIDQEIEALIEERRQARANKDFARSDAIRDQLKEQGILLDD 468
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 469 T------PQGTVWKR 477
>gi|325695526|gb|EGD37426.1| cysteine--tRNA ligase [Streptococcus sanguinis SK150]
Length = 447
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTTLGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIECLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|254514497|ref|ZP_05126558.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
gi|219676740|gb|EED33105.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR5-3]
Length = 462
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 202/481 (41%), Positives = 277/481 (57%), Gaps = 46/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNT R+ F +DP + MYVCGPTVY+ AHIGNARP++VFD L+RLL+ +Y
Sbjct: 1 MALQLYNTRARRKEAFDPVDPDCVTMYVCGPTVYNLAHIGNARPVVVFDTLFRLLQTHY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI+ A+++ AI +I + Q++ +DT +L L PT +
Sbjct: 60 -DKVVYARNITDIDDKIMRAAQEQGV------AIDVIAGEFAQKYREDTAQLNALPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT++I MI L +++I HAY A ++FD +S+ +YG S R +D+ G RV
Sbjct: 113 PHATDNIGPMIALTESLIERNHAYAAEGHVLFDVTSMKDYGQLSGRSLDDMLAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ EPGWESPWGR RPGWH+ECSAM +LG DIHGGG DLIF
Sbjct: 173 GYKRHPGDFVLWKPSSADEPGWESPWGRVRPGWHLECSAMIREHLGPTIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA E +W+HN FL+++G KMSKS GN TI ELL +
Sbjct: 233 PHHENELAQSCCAFGDE-FVRVWMHNAFLDMDGEKMSKSLGNVATIRELLTR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAVLS 353
V+R A+L HYR P++F+ L +AE L+ + T S I+ +
Sbjct: 285 RGEVLRFALLSAHYRSPLNFSEALLEQAEQTLTSFYNTLRSVQGIELDCEVSLEGEGFYA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH-----DLLPIFNASAHILGIEVCKE--------- 399
AL +DLNT AI LH LAR+ K L A+ ++LGI
Sbjct: 345 ALCDDLNTPLAISELHVLARDINKASGSDKPALKARLLAAGNLLGILQQDPLEWLQGDGA 404
Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L + A+E L+ ER+ + ++ AD IR +L + G ILED T W+
Sbjct: 405 SDLQGLDAEAVEALIAERVAAKANRDYARADEIRDELTAGGIILEDS------AGGTLWR 458
Query: 459 Q 459
+
Sbjct: 459 R 459
>gi|322377813|ref|ZP_08052302.1| cysteine--tRNA ligase [Streptococcus sp. M334]
gi|321281236|gb|EFX58247.1| cysteine--tRNA ligase [Streptococcus sp. M334]
Length = 447
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQTFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + + + GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALASMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|239825672|ref|YP_002948296.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
gi|259511835|sp|C5D3P6|SYC_GEOSW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|239805965|gb|ACS23030.1| cysteinyl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 466
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 178/490 (36%), Positives = 254/490 (51%), Gaps = 57/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR IVFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKELFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDK+I+ AR+ +P I + Q + +D T L C
Sbjct: 61 YE--VKYVSNFTDVDDKLIKAARELGEDVPT------IAERFIQAYFEDITALGCKKADV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T +I +I IQ +I G+AYE + ++ + T YG S + IDE K G R+
Sbjct: 113 HPRVTENIDTIIEFIQTLIDRGYAYEVDGDVYYRTRKFKEYGKLSHQSIDELKAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL
Sbjct: 173 GEKKEDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLT 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG+LN+ KMSKS GNF+ +++++ +
Sbjct: 233 FPHHENEIAQSEALTG-KPFAKYWLHNGYLNINNEKMSKSLGNFVLVHDII-------QQ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLT-----------EAEILLSKWPQTSTSKGIIDPA 350
V+R ML HYR PI+++ + L L + ++ D
Sbjct: 285 IDPQVLRFFMLSVHYRHPINYSEELLESAKKGLERLKTSYFNLKHRLQSSTNLTDDDDQW 344
Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
+ + +D NT + I L +L++++ H L F
Sbjct: 345 LARIQEQHEAFIREMDDDFNTANGIAVLFELSKQANLYLLEKNTSERVIHAFLREFEQLL 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI + +E L L+Q+R K + F+ AD IR +L++K ILED
Sbjct: 405 DVLGITLQEEELLDEEIE---ALIQKRNEARKNRNFALADQIRDELKAKNIILEDT---- 457
Query: 450 NGQRMTRWKQ 459
+ TRWK+
Sbjct: 458 --PQGTRWKR 465
>gi|301299859|ref|ZP_07206093.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852530|gb|EFK80180.1| cysteine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 470
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 171/492 (34%), Positives = 260/492 (52%), Gaps = 60/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL + +F+ ++P + MYVCGPTVY++ HIGNAR + FD + R L Y E
Sbjct: 1 MLQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ +++ +N ++ IT K F +DT+ L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
R +++ +I I+ ++ G+AYE+ ++ + T +YG S + ID+ +
Sbjct: 113 RVMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDD 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ K++P DF LWK++ E W+SPWG+GRPGWHIECS MS+ YLG DIH GG D
Sbjct: 173 IDQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K A W+HNGF+ + E +KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ VIR M T YR PI ++ L EA++ L+K +
Sbjct: 287 --KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDK 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ + + +D N + I ++++A++ + L+ +
Sbjct: 345 EVEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI +E + + IE+L+QER K K F +D IR L+ +G ILED
Sbjct: 405 VVEIFGISFSEEK--ELLDDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT-- 460
Query: 448 PDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 461 ----AQGTRWKR 468
>gi|315174139|gb|EFU18156.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1346]
Length = 478
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFN 386
++ ++ + +D N + I +++LA+ + + +FN
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKLFN 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|51246780|ref|YP_066664.1| cysteinyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|61216190|sp|Q6AJ23|SYC_DESPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|50877817|emb|CAG37657.1| probable cysteinyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 489
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 178/499 (35%), Positives = 252/499 (50%), Gaps = 66/499 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL K Q I+P+++++YVCG T YD+ HIG+AR + FD++ R LRY
Sbjct: 1 MDIRVYNTLSGKKEPLQPIEPNHVKLYVCGITSYDYCHIGHARSALAFDMIVRYLRYL-- 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN TDIDDKII RA + + + + +F D L L P +
Sbjct: 59 DYKVTFVRNFTDIDDKIIARANETGVTA------QALAERFIDEFHTDMDNLGTLRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +MI +IQ ++ AY + ++ + +S P YG S R I++ + G R+
Sbjct: 113 PKATEHIQEMIDIIQELVDKDMAYPSAGDVYYVVNSFPEYGKLSGRNIEDMQAGARISIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK S P EP WESPWG GRPGWHIECSAMS YLG+ FDIHGGG DLIF
Sbjct: 173 EQKRNPMDFALWKASKPGEPSWESPWGPGRPGWHIECSAMSRKYLGENFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + AN WIH+GF+ ++ KMSKS GNF+TI ++L+ +
Sbjct: 233 PHHENEIAQSEGANG-KPFANTWIHHGFVTIKDEKMSKSLGNFLTIKDILD-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
++R + T YR P+DF+ + +AE L + +
Sbjct: 285 HPEILRAFIFSTQYRNPLDFSEIAMQDAETALVRLYECLHDIQQLAKGDPTLPALISAKD 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
I+ A+ ND NT A+ L+ + + L +
Sbjct: 345 AAKLNSIETRFQEAMNNDFNTALALGVLYDAIKIINRAQRALTDTPSALDVKMLKGSMTL 404
Query: 385 FNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIR 432
A I+G+ +L IE +Q+RL K ++ +D IR
Sbjct: 405 IQKLAGIVGLLQEDANLFLQQRKEKMLSGIDITEAEIESYIQQRLDARANKDWARSDEIR 464
Query: 433 KQLESKGFILEDYKNPDNG 451
L KG L+D +
Sbjct: 465 DILLEKGITLKDGADGTGW 483
>gi|328951998|ref|YP_004369332.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328452322|gb|AEB08151.1| cysteinyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 490
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 187/511 (36%), Positives = 247/511 (48%), Gaps = 77/511 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL R+ F + P +++Y CG TVYD HIG+AR +VFDV+ R LR+
Sbjct: 1 MQVYNTLSRRKEAFIPLKPGIVQIYACGVTVYDDCHIGHARSAVVFDVIVRYLRFLGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V++VRN TDIDDKII+RA +EH S + F +D L +P+
Sbjct: 59 KVSWVRNFTDIDDKIIQRAEREHTS------WKTVAETYIASFQRDMAALGVAPADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+HI ++I IQ + G AY+ N ++ F + P YG S R +D+ G RV
Sbjct: 113 ATDHIDEIIGFIQVLEDQGLAYQRNGDVYFPVAKFPGYGKLSGRSLDDMLAGARVDVNIQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DF LWK S P EP W+SPWG GRPGWHIECSAMS HYLG+ FDIHGGG DLIFPH
Sbjct: 173 KDNPFDFALWKASKPGEPAWDSPWGPGRPGWHIECSAMSRHYLGETFDIHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNG + + KMSKS GNF TI E+L +
Sbjct: 233 HENEIAQSEAAHG-KPLARYWLHNGMVTVNQEKMSKSLGNFFTIREVLA-------KFHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
V+R ++ HYR P+DF+ Q L EAE L + T
Sbjct: 285 EVVRFFLIQNHYRSPLDFSDQALAEAENALERLYSTLARLDQTTGPIAAPEAISGAFSLS 344
Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPI-- 384
I L A+ +D NT A+ L R + N D+ +
Sbjct: 345 GLDSEEQSRLLTIRSRFLEAMDDDFNTAQALGVLFDAVRLLNRIVEHNPSGNADMSALAW 404
Query: 385 ----FNASAHILGIEVCKE--------HLNKNI---SIAIEKLVQERLILLKMKKFSSAD 429
IL + + IE+L+ R K + F+ AD
Sbjct: 405 TRRELTVLGGILNLLQQDPQTMLQNLRQKTDALTIPPSEIERLIAARAEARKQRDFTKAD 464
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR+QL G +LED + W+ K
Sbjct: 465 AIRQQLAEAGVLLEDT------PQGAVWRVK 489
>gi|307729279|ref|YP_003906503.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583814|gb|ADN57212.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 479
Score = 388 bits (997), Expect = e-106, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 254/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F ++P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 15 MES-LRIYNTLARDKQTFVPLEPGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 73
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII RA + + I +T + Q +D L P
Sbjct: 74 GYQ--VTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIQALHEDADALGIARPD 125
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + G+AY+ + ++ + YG S + +++ + G RV
Sbjct: 126 MEPRATDFIPQMLGMIEKLEEKGYAYQAKDGDVNYAVRKFAGYGKLSGKSLEDLRAGERV 185
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK+S EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 186 AANDAKEDPLDFVLWKQSKADEPADTGWDSRYGRGRPGWHIECSAMGCTLLGERFDIHGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 246 GQDLQFPHHENEIAQSEAATG-QPFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 301
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R + HYR P++++ + +A L +
Sbjct: 302 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALGRLYTALKDVTPDGAALDWNEA 357
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + D L + +LG+ +
Sbjct: 358 HAQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVLGLLGREPRAYLQ 417
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
AIE + ER+ + K +++AD IR +L G LED
Sbjct: 418 QAAGAAVQGALEPAAIEAKIAERVAAKQAKDYAAADRIRAELLEAGVALEDKPGGL---- 473
Query: 454 MTRWKQ 459
T W++
Sbjct: 474 -TEWRR 478
>gi|253577158|ref|ZP_04854478.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251843402|gb|EES71430.1| cysteinyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 468
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 172/492 (34%), Positives = 247/492 (50%), Gaps = 58/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R EF ++ P ++MYVCGPTVY + HIGNARPMI FDV+ L
Sbjct: 1 MGLQIYNTLTRAKEEFVSLTPGKVKMYVCGPTVYGYIHIGNARPMIFFDVVRSYLENQRY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I +A + +N + + + + +D L T
Sbjct: 61 D--VNYVVNFTDVDDKLIRKAEE------MNLTVPEVAEMFIKAYYEDLDGLGIPRATAN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I+++ G AYE+ ++ F T P YG S + I E + G R+
Sbjct: 113 PRVTENMDVIINFIRDLEQKGFAYESGGDVFFRTHKFPEYGKLSGQNIGELQFGIRIDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P E W SPWG GRPGWHIECSAMS LG DIHGGG DL F
Sbjct: 173 ERKEHPEDFVLWKAAKPGEIHWSSPWGEGRPGWHIECSAMSRQLLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS A + A W+HNG++N++G KMSKS GN + + +L +
Sbjct: 233 PHHECEVAQSEAATG-KPLARYWMHNGYINIDGEKMSKSLGNGVLVKDLRA-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------------PQ 339
IR ML THYR P++F+ + + +AE + + P+
Sbjct: 285 KREAIRYFMLSTHYRNPLNFSEETMQQAERSVERISNAANNLRHRLNTAPQGGETKVTPE 344
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
+ I + + +D NT AI A+ + E L +F
Sbjct: 345 WAEKLETIRNLFHAKMQDDFNTPDAITAVFEWVSEVNALLQQPVTVRGDLEAALQLFEEM 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+L I + E + IE L+ ER K K ++ AD IR L+++G +LED
Sbjct: 405 NGVLRIALPPE--TELPGEEIEALIAERAEARKAKNWARADEIRDLLDARGIVLEDT--- 459
Query: 449 DNGQRMTRWKQK 460
+ RW++K
Sbjct: 460 ---PQGMRWRRK 468
>gi|327468352|gb|EGF13837.1| cysteine--tRNA ligase [Streptococcus sanguinis SK330]
Length = 447
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 237/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T +
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + D+ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTSDIKAAFAELLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARGNRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|296113612|ref|YP_003627550.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921307|gb|ADG61658.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|326559609|gb|EGE10023.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565528|gb|EGE15699.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567711|gb|EGE17817.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568652|gb|EGE18723.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC7]
gi|326568779|gb|EGE18849.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575029|gb|EGE24958.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis O35E]
Length = 480
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 179/494 (36%), Positives = 253/494 (51%), Gaps = 58/494 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++Y+TL F+ I I +YVCG TVYD+ H+G+AR M+ FDV+ R LR
Sbjct: 8 QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRNITDIDDKII+RA + I+ +T + +D L C +P
Sbjct: 68 YQ--VNYVRNITDIDDKIIQRAYDNG------ETITELTDRFITAMHQDEQFLGCQSPNI 119
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTR 178
+PRAT HI M +LI ++ AY+ + ++ + PNYG S+R +D+ + R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+ LG+ FDIHGGG
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+H GF+N++G KMSKS GNF TI E+++
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD----- 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSK 344
+ IR +L +HYR P++F+ L E+ LS+ Q+ + +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIE 395
A A+ +D NT A+ L + E K A +L I
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411
Query: 396 VCKEHL----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
H + I + +R K F+ AD IR +L +G LED
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470
Query: 446 KNPDNGQRMTRWKQ 459
G+ T W++
Sbjct: 471 -----GRMGTTWRR 479
>gi|289665721|ref|ZP_06487302.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vasculorum
NCPPB702]
Length = 476
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 196/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++NTL R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + N IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
P +R A+L HYR+P+D++ + +A+ L + T +D
Sbjct: 286 KHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345
Query: 351 ----VLSALYNDLNTVSAIQALHKLARES-----------------TKNHDLLPIFNASA 389
V +AL +DLNT A+ + +A E+ + H + +
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|293382260|ref|ZP_06628200.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
gi|293386691|ref|ZP_06631264.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
gi|312908762|ref|ZP_07767701.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|312979222|ref|ZP_07790926.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|291080374|gb|EFE17738.1| cysteine--tRNA ligase [Enterococcus faecalis R712]
gi|291083860|gb|EFE20823.1| cysteine--tRNA ligase [Enterococcus faecalis S613]
gi|310625200|gb|EFQ08483.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|311287987|gb|EFQ66543.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
Length = 478
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILTFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|229550658|ref|ZP_04439383.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|229304224|gb|EEN70220.1| cysteinyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
Length = 478
Score = 388 bits (997), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITPP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQAAVSEPILVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|253999955|ref|YP_003052018.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
gi|253986634|gb|ACT51491.1| cysteinyl-tRNA synthetase [Methylovorus sp. SIP3-4]
Length = 456
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 183/477 (38%), Positives = 258/477 (54%), Gaps = 43/477 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ F I + MYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 1 MLKIYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA++ ++I +TS+ +D RL + P +P
Sbjct: 61 --VTYVRNITDIDDKIIKRAQENG------ESIQALTSRFITAMDEDAARLGVMRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT HI M+ +I +I G AY N ++ + SS YG S + +++ + G RV
Sbjct: 113 KATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG FDIHGGG DL F
Sbjct: 173 QYKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+HNGF+ ++ KMSKS GNF TI ++LE +
Sbjct: 233 PHHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
A V+R +L YR P++++ L +A L++ T +
Sbjct: 285 DAEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTFTIDWQQPQAARFK 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLN 402
+A+ +D NT A L +LA E + L A E
Sbjct: 345 AAMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQ 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+ +Q RL + K F+ AD IRKQL +G +LED + T W++
Sbjct: 405 GRSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDS------PQGTSWRR 455
>gi|326560050|gb|EGE10445.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 480
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 179/494 (36%), Positives = 253/494 (51%), Gaps = 58/494 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++Y+TL F+ I I +YVCG TVYD+ H+G+AR M+ FDV+ R LR
Sbjct: 8 QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRNITDIDDKII+RA + I+ +T + +D L C +P
Sbjct: 68 YQ--VNYVRNITDIDDKIIQRAYDNG------ETITELTDRFITAMHQDEQFLGCQSPNI 119
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTR 178
+PRAT HI M +LI ++ AY+ + ++ + PNYG S+R +D+ + R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+ LG+ FDIHGGG
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+H GF+N++G KMSKS GNF TI E+++
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVMD----- 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSK 344
+ IR +L +HYR P++F+ L E+ LS+ Q+ + +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIE 395
A A+ +D NT A+ L + E K A +L I
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411
Query: 396 VCKEHL----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
H + I + +R K F+ AD IR +L +G LED
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKAQKNFAKADAIRDELNRQGIELED- 470
Query: 446 KNPDNGQRMTRWKQ 459
G+ T W++
Sbjct: 471 -----GRMGTTWRR 479
>gi|255971591|ref|ZP_05422177.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
gi|257421384|ref|ZP_05598374.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
gi|255962609|gb|EET95085.1| cysteinyl-tRNA synthetase [Enterococcus faecalis T1]
gi|257163208|gb|EEU93168.1| cysteinyl-tRNA synthetase [Enterococcus faecalis X98]
gi|323479282|gb|ADX78721.1| cysteinyl-tRNA synthetase [Enterococcus faecalis 62]
Length = 470
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVADRFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|161830739|ref|YP_001597327.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
gi|187629808|sp|A9N924|SYC_COXBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|161762606|gb|ABX78248.1| cysteinyl-tRNA synthetase [Coxiella burnetii RSA 331]
Length = 458
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 171/473 (36%), Positives = 251/473 (53%), Gaps = 40/473 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+N+L ++ F+ I+ +++YVCG TVYD+ HIG+ R I+FD++ R LR E
Sbjct: 1 MKIFNSLTKQKEIFKPIESGKVKLYVCGMTVYDYMHIGHGRSWIIFDMVVRYLRMRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRNITDIDDKII+RA + ++ + + + Q +D L L+P +PR
Sbjct: 60 -VTFVRNITDIDDKIIKRAGENK------ESPAALAERFIQILHEDEKALRVLSPDQEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++P++I LIQ ++ + +AY N ++ FD +YG S R +D+ + G RV
Sbjct: 113 ATQYVPEIIKLIQKLLDNQYAYTGQNGDVFFDVRRFKDYGKLSHRHLDKLQAGARVEVSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK++ P EP W+SPWG GRPGWHIECSAMSS LG+ FDIHGGGLDL FP
Sbjct: 173 SKRDPLDFVLWKKAKPGEPKWDSPWGEGRPGWHIECSAMSSSILGQPFDIHGGGLDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + +W+H G L + KMSKS GN I+I E L +
Sbjct: 233 HHENEIAQSE-AGEEKPFVKLWMHAGLLEINKEKMSKSLGNIISIREAL-------KESD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVLSAL 355
V+R +L HYR P+ ++ + L + L ++ A+
Sbjct: 285 VEVLRYFLLSGHYRNPLSYSKENLENGRLALERFYLALRGLPVVNHEKTSSYTDRFYEAM 344
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH------ 400
+D NT A L ++ RE + D L +I G+
Sbjct: 345 DDDFNTPIAFALLFEMVREINRFRDNNQIEKAAVLAAELKCLGNIFGLLQYSPEQFLQGA 404
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I+KL+ +R K + +AD IR QL G +ED + + ++
Sbjct: 405 KKEADVQEIKKLIDQRNEARAKKDWKTADQIRDQLTDLGVAIEDSSDGTSWRQ 457
>gi|307284103|ref|ZP_07564273.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|306503474|gb|EFM72723.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|315026628|gb|EFT38560.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2137]
Length = 478
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|331266879|ref|YP_004326509.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
gi|326683551|emb|CBZ01169.1| cysteinyl-tRNA synthetase [Streptococcus oralis Uo5]
Length = 447
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 237/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKTAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN WIHNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWIHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIID--------PA 350
+ V+R HYR+PI+FT + R E + K G +D
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKITYEQPFTGNVDTQELQDFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N+ + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|289671266|ref|ZP_06492341.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. musacearum
NCPPB4381]
Length = 476
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 196/496 (39%), Positives = 268/496 (54%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++NTL R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNTLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLSALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + N IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQ------NVPISTITDRFAAIYRQDMAALGVMPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
P +R A+L HYR+P+D++ + +A+ L + T +D
Sbjct: 286 KHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALDADGGSDVGSSKT 345
Query: 351 ----VLSALYNDLNTVSAIQALHKLARES-----------------TKNHDLLPIFNASA 389
V +AL +DLNT A+ + +A E+ + H + +
Sbjct: 346 IPAEVEAALDDDLNTPLALSVIASIAAEARALRNELVHGGEPLGRMNELHAVRAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 MALGLLQQDPAAWFARGTDAGDDARITALVEERNAAKKAKDFARADAIRKQLADQGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|332365578|gb|EGJ43338.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1059]
Length = 447
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKKEGIT------PKEVADKYIAAFHEDVTALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVAKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + + F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRNELAAQGIKLLDTKDGVRWTR 446
>gi|328944848|gb|EGG39008.1| cysteine--tRNA ligase [Streptococcus sanguinis SK1087]
Length = 447
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I ++ ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVRTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKVAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L+ ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIDERQEARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|256956971|ref|ZP_05561142.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|257078648|ref|ZP_05573009.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|294780003|ref|ZP_06745382.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|256947467|gb|EEU64099.1| cysteinyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256986678|gb|EEU73980.1| cysteinyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|294452897|gb|EFG21320.1| cysteine--tRNA ligase [Enterococcus faecalis PC1.1]
Length = 470
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVADRFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|237736150|ref|ZP_04566631.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229421703|gb|EEO36750.1| cysteinyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 472
Score = 388 bits (996), Expect = e-105, Method: Composition-based stats.
Identities = 182/487 (37%), Positives = 261/487 (53%), Gaps = 54/487 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK+ EF+ + + MYVCGPTVY++ HIGNARP I FD + R +
Sbjct: 1 MIKIYNTLTRKLEEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEFRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
VTYV N TD+DDKII+RA +E S + +K + + +DT ++ +
Sbjct: 60 -KVTYVSNFTDVDDKIIKRANEEGIS------CEEVAAKYIKAYFEDTAKVNLKEEGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT HI MI LI+++I GHAYE+ ++ FD S Y S + +++ + G R+
Sbjct: 113 PKATEHIGGMIKLIKSLIEKGHAYESQGDVYFDVESYKDEYLGLSHQNLEDLRSGARIEI 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK++ EP W SPWG+GRPGWHIECSAMS YLG FDIHGGG DLI
Sbjct: 173 SEIKKSPLDFALWKKAKEGEPSWNSPWGQGRPGWHIECSAMSHKYLGDTFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C + A W+HNG++N+ G KMSKS GNF + ++LE
Sbjct: 233 FPHHENEIAQSKCGCGGD-YARYWMHNGYINVNGEKMSKSLGNFFLLRDVLE-------H 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
+ V+RL +L +HYR+PIDF+ LT+A+ L +
Sbjct: 285 YDGRVVRLFVLSSHYRKPIDFSDAELTQAKTSLERIENALMRGKEAVIDVKADGSSCMEL 344
Query: 343 --SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAH 390
+ ++A+ D NT + A+ +L +E K D + +
Sbjct: 345 KEQLAVAKEKFIAAMDEDFNTSMGLGAIFELVKELNKAVDTPINAEGAEVVKETVEYIIN 404
Query: 391 I----LGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ LG+++ E + N+ S IE +++ R K ++ +D IR +L G ++D
Sbjct: 405 VMEEALGVKLKLETVVGNMTSELIEFILELRREARNEKNWAMSDKIRDRLAEMGIKIKDG 464
Query: 446 KNPDNGQ 452
K+
Sbjct: 465 KDKTTWT 471
>gi|227891227|ref|ZP_04009032.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
gi|227867101|gb|EEJ74522.1| cysteinyl-tRNA synthetase [Lactobacillus salivarius ATCC 11741]
Length = 470
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 171/492 (34%), Positives = 260/492 (52%), Gaps = 60/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL + +F+ ++P + MYVCGPTVY++ HIGNAR + FD + R L Y E
Sbjct: 1 MLQLYNTLTNQKEKFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ +++ +N ++ IT K F +DT+ L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSALNVKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
R +++ +I I+ ++ G+AYE+ ++ + T +YG S + ID+ +
Sbjct: 113 RVMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDD 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ K++P DF LWK++ E W+SPWG+GRPGWHIECS MS+ YLG DIH GG D
Sbjct: 173 IDQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K A W+HNGF+ + E +KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ VIR M T YR PI ++ L EA++ L+K +
Sbjct: 287 --KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDK 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ + + +D N + I ++++A++ + L+ +
Sbjct: 345 EVEVNFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI +E + + IE+L+QER K K F +D IR L+ +G ILED
Sbjct: 405 VVEIFGISFSEEK--ELLGDTIEQLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT-- 460
Query: 448 PDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 461 ----AQGTRWKR 468
>gi|14590527|ref|NP_142595.1| cysteinyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|6831682|sp|O58370|SYC_PYRHO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|3257043|dbj|BAA29726.1| 476aa long hypothetical cysteinyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 476
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 187/495 (37%), Positives = 251/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL ++ EF+ I+ +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MTLRIYNTLTKQKEEFKPINEGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII RA++ + + + K + F++D L
Sbjct: 61 --SVLMVMNFTDIDDKIIRRAKETG------EDPAKLAEKFIKVFLEDMKALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I I+ + G+AYE ++ + F+ YG S K++E + G RV
Sbjct: 113 PRVTEHIEDIIQFIERLKEKGYAYEGSDGVYFEVQKFKEYGKLSGVKLEELRKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK++ P EP WESPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWESPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E + W+H GF+ ++G KMSKS GNF+T+ ELL + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVHYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------------- 339
VIR +L HYR P+D++ + L A+ L +
Sbjct: 285 SPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMENAELAYTWDENDF 344
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFN 386
S A+ +D NT A++A+ +++ K F
Sbjct: 345 KAYNSIKEARRKFYEAMDDDFNTAEALKAVFEVSNAINKYITEAEKPKESVLRKAWEFFR 404
Query: 387 ASAHILGIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
I GI KE K IE L+Q R L K +KF AD IR++L G LED
Sbjct: 405 TVGEIFGIFEEYFKEEKAKEEEKLIELLIQVRAELRKERKFELADKIREELRKLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 KG------KETIWKR 473
>gi|302382798|ref|YP_003818621.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302193426|gb|ADL00998.1| cysteinyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 469
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 181/487 (37%), Positives = 257/487 (52%), Gaps = 48/487 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++TL R+ F DP + +YVCGPTVYDFAHIGNARP +VFDVL RLLR YG
Sbjct: 1 MTLFLHDTLHREKRAFVPRDPERVTLYVCGPTVYDFAHIGNARPPVVFDVLVRLLRREYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y RN+TD+DDKI +A +E I +T++ ++ D + L P
Sbjct: 61 AESVIYARNVTDVDDKINAKAHREGV------PIGDVTARYEAAYLADMSALNVTPPDIA 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T H+ ++ I I+ G AY A ++FD SS P+YG+ S R +D+ G RV
Sbjct: 115 PHVTGHMDAIVRQIGEIMDQGCAYAAEGHVLFDVSSYPSYGALSGRNLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNP DF+LWK S P EP W SPWG GRPGWHIECSAM LG DIHGGG+DL+F
Sbjct: 175 PYKKNPHDFVLWKPSKPDEPSWPSPWGDGRPGWHIECSAMIEQTLGLPIDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADR-------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
PHHENEIAQ CA + + W+HNGFL ++ KMSKS GN + +++L+
Sbjct: 235 PHHENEIAQGVCAHGHAHDADSHDAYSRYWMHNGFLTVDAEKMSKSVGNVLLLHDLV--- 291
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------D 348
++ P V+R A+L HYR+P+D+ L ++ L + +
Sbjct: 292 ----QTIPGEVVRWALLSAHYRQPLDWNQSLLDQSRKNLDRLYGALRRAEAVAPLGDMPS 347
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV--- 396
P L+A+ +DLNT A+ L L+ E + AS+ ILG+ +
Sbjct: 348 PEFLTAISDDLNTPGAMATLFALSSEIERAMTAGDHHAVGIAKAELLASSRILGVLLSTP 407
Query: 397 ---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + + +E L+ ER+ K ++ AD IR +L + ++ D
Sbjct: 408 DQWFEGGADDALKAEVEGLLAERVTARAEKNWAEADRIRDRLTALNVVVMDGPTGA---- 463
Query: 454 MTRWKQK 460
W+ K
Sbjct: 464 --TWRLK 468
>gi|222152121|ref|YP_002561281.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|222121250|dbj|BAH18585.1| cysteinyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 469
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 173/483 (35%), Positives = 255/483 (52%), Gaps = 49/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ I +YNTL R +F I+ ++MYVCGPTVY++ HIGNARP I FDV+ R Y
Sbjct: 5 RMITLYNTLTRSKEKFVPIEEGRVKMYVCGPTVYNYIHIGNARPAISFDVVRRYFEYRGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV N TD+DDK+I+ A + ++P I + + + +DT L C TH
Sbjct: 65 E--VDYVSNFTDVDDKLIKAANELGETVP------EIADRFIEAYFEDTHALNCKTATHH 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +H+ +I I +I G+AYE+ ++ F T YG S + IDE K+G R+
Sbjct: 117 PRVMDHMEDIIEFIDELIKKGYAYESGGDVYFRTRKFEGYGKLSHQSIDELKVGARIQAG 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K + DF LWK + P E W+SPWG GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 177 ELKDDALDFALWKTAKPGEISWQSPWGEGRPGWHIECSVMAKKHLGDSIDIHAGGSDLTF 236
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 237 PHHENEIAQSE-AHNDTTFANYWLHNGFINIDNEKMSKSLGNFILVHDII-------KEI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------------- 342
V+R M+ HYR PI++ ++ + A+ L +
Sbjct: 289 DPNVLRFFMISVHYRNPINYNMELVASAKAGLERIQNAYQAMKERQAISVDVVNHAETIL 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
I +A+ +D NT +AI A ++LA+++ + + +F + +
Sbjct: 349 VIDNILKQFETAMDDDFNTANAITAWYELAKQANIYNQNPSTDLKVINRFIEVFEVFSEV 408
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+++ + + + +E+L++ER K K F AD IR L+++ ILED
Sbjct: 409 LGVKL--DTSDTLLDEEVERLIEERQEARKNKDFKRADEIRDALKAQNIILEDTAQGVRY 466
Query: 452 QRM 454
+R
Sbjct: 467 KRG 469
>gi|322386163|ref|ZP_08059796.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|321269743|gb|EFX52670.1| cysteine--tRNA ligase [Streptococcus cristatus ATCC 51100]
Length = 447
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGITS------QEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVVEFMGDIIRFVEDLIDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVYDAATNLKYLKNTYEQPFTGQAESAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + + + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAKVKAALAELLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|29374703|ref|NP_813855.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
gi|61216301|sp|Q839V5|SYC_ENTFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|29342161|gb|AAO79927.1| cysteinyl-tRNA synthetase [Enterococcus faecalis V583]
Length = 470
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 168/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIKIYNTLTREKEVFTPIEARKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 113 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +L + DIHGGG DL
Sbjct: 173 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLEETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 233 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 286 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 345 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 405 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 460
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 461 -----PQGTRWRR 468
>gi|315143639|gb|EFT87655.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2141]
Length = 478
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|319939876|ref|ZP_08014231.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
gi|319810887|gb|EFW07206.1| cysteinyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
Length = 447
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTTLGVQPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ +I +Q ++ G AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVVDYMMDIIDFVQVLVDKGFAYESEGDVYFRVEKSSNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETTRKENPVDFALWKAAKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
+ V+R HYR+PI+FT + + +AE+ L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + ++A+ H ++ F + GI E +
Sbjct: 345 FTAAMDEDFNAANGITVVFEMAKWINSGHYSQEVKTAFAELLQVFGIVFTAE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR +L +KG L D K+ R
Sbjct: 401 DIEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKDGVRWIR 446
>gi|306819816|ref|ZP_07453471.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304552185|gb|EFM40121.1| cysteine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 466
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 179/482 (37%), Positives = 250/482 (51%), Gaps = 50/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ K EF I+ ++MY CGPTVY++ HIGNARP IVFDVL L Y E
Sbjct: 1 MKIYNTMTMKKEEFHEIEKGKVKMYSCGPTVYNYFHIGNARPFIVFDVLRNYLEYIGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TD+DDKII++A +E S + K ++ KD + T PR
Sbjct: 60 -VTFVQNFTDVDDKIIKKANEEGISAI------EVADKYIDEYYKDAAAIGIRKATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +I ++I IQ++I G AY ++ F+ YG S + IDE G R+
Sbjct: 113 VTENIKEIIGFIQDLIDKGFAYVLGGDVYFEVKKFDEYGKLSHKNIDELISGARIDVNEQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK E GW+SPWG GRPGWHIECS MS+ YLG DIH GG DLIFPH
Sbjct: 173 KKSPLDFALWKEKKEGEIGWDSPWGVGRPGWHIECSVMSNKYLGANIDIHSGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C + AN W+HNG++N++ KMSKS GNF T+ ++L + +
Sbjct: 233 HENEIAQSECKNGC-TFANYWMHNGYINIDNVKMSKSLGNFFTVRDVL-------KVYDG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------- 345
V+R ML +HYR PI+++ L A+ L + +S
Sbjct: 285 DVLRFFMLTSHYRSPINYSKDLLDSAKSSLDRIKNCKSSLDFSLQKSQDKEVSQEEKDIL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
I + + +DLNT AI A+ L + + + +L + N +
Sbjct: 345 ENVQAIKSTFIEKMNDDLNTADAITAIFDLVKLANTSVNENSSKTFVQSILSMLNELTAV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L I E + + IE+L++ R K K F+ AD IR++L G ++D +
Sbjct: 405 LNI-ANNEKAEEQDTSKIEELIELRNQAKKSKDFAKADEIREELRKMGIEIKDTRQGTQW 463
Query: 452 QR 453
+
Sbjct: 464 SK 465
>gi|300214882|gb|ADJ79298.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus salivarius CECT 5713]
Length = 470
Score = 387 bits (995), Expect = e-105, Method: Composition-based stats.
Identities = 172/492 (34%), Positives = 259/492 (52%), Gaps = 60/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL + F+ ++P + MYVCGPTVY++ HIGNAR + FD + R L Y E
Sbjct: 1 MLQLYNTLTNQKERFEPLNPGKVTMYVCGPTVYNYIHIGNARSAVAFDTIRRYLEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ +++ +N ++ IT K F +DT+ L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKASQE------MNLSVKEITEKFINAFYEDTSVLNIKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
R +++ +I I+ ++ G+AYE+ ++ + T +YG S + ID+ +
Sbjct: 113 RVMDNMDDIIKFIEVLVQKGYAYESAGDVYYKTRKFKDYGKLSGQLIDDLEQGASSRVDD 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ K++P DF LWK++ E W+SPWG+GRPGWHIECS MS+ YLG DIH GG D
Sbjct: 173 IDQDKKQDPLDFALWKKAKQGEISWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K A W+HNGF+ + E +KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFARYWLHNGFVTIGEEDQKMSKSLGNFVTVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ VIR M T YR PI ++ L EA++ L+K +
Sbjct: 287 --KEVNPQVIRFFMSTTQYRRPIRYSSANLNEAKVNLNKLQTAYENLSYRLKDSVEGNDK 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ + + +D N + I ++++A++ + L+ +
Sbjct: 345 EVEANFANLEKDFVKVMDDDFNVQNGISVVYEMAKQLNVYSEKEKVYTDTINNLINTYKK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI +E + + IEKL+QER K K F +D IR L+ +G ILED
Sbjct: 405 VVEIFGISFNEEK--ELLDDTIEKLIQERNEARKNKNFKRSDEIRDLLKEQGIILEDT-- 460
Query: 448 PDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 461 ----AQGTRWKR 468
>gi|332158896|ref|YP_004424175.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331034359|gb|AEC52171.1| cysteinyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 476
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 187/495 (37%), Positives = 250/495 (50%), Gaps = 60/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL ++ EF+ I +RMYVCGPTVYD+ H+G+AR I FDV+ R L +
Sbjct: 1 MSLKVYNTLTKRKEEFKPIREGEVRMYVCGPTVYDYPHLGHARTYIAFDVIRRYLEHKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TDIDDKII RAR+ + + K + F++D L
Sbjct: 61 --TVLMVMNFTDIDDKIIRRARETG------EDPKELAEKFIKVFLEDMNALKVKPADIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I I+ + G+AYE + + F+ YG S KI+E + G RV
Sbjct: 113 PRVTEHIGDIIDFIKKLEEKGYAYEGKDGVYFEVQKFKEYGKLSGIKIEELRKGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK++ P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 173 EGKKNPEDFALWKKAKPGEPKWDSPWGEGRPGWHIECSVMSSKYLGESFDIHGGGNDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E W+H GF+ ++G KMSKS GNF+T+ ELL + +
Sbjct: 233 PHHENEIAQSEACFGHE-WVRYWLHTGFVMVKGEKMSKSLGNFVTVRELL-------QRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
VIR +L HYR P+D++ + L A+ L + T
Sbjct: 285 SPEVIRFFVLQKHYRSPLDYSEEGLQHAKNNLERLYNTLENIRIAMERAELAYTWDEDDY 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+ A+ +D NT A++A+ +++ K L F
Sbjct: 345 EVYEAIKNARKKFYEAMDDDFNTAEALKAVFEVSNAINKYLTEKERPKEAILRKALEFFK 404
Query: 387 ASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ I GI + KE + I+ LV R L K K+F AD IR++L G LED
Sbjct: 405 VVSEIFGIFEDYFKEEKREIEEELIKVLVDVRSQLRKEKRFDLADKIREELRRLGIQLED 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 465 RG------QETVWKR 473
>gi|160947200|ref|ZP_02094367.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
gi|158446334|gb|EDP23329.1| hypothetical protein PEPMIC_01133 [Parvimonas micra ATCC 33270]
Length = 461
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 180/479 (37%), Positives = 258/479 (53%), Gaps = 47/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK +F+ I +YVCGPTVY++ HIGN+RPMIV+D L R L Y +
Sbjct: 1 MKIYNTLTRKKEDFKPIQAGKALIYVCGPTVYNYIHIGNSRPMIVYDTLRRYLLYIGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQP 123
V +V N TDIDDKII RA++E N + IT K +++D+ L + T P
Sbjct: 60 -VKFVSNFTDIDDKIINRAKEE------NVPFTDITKKYIDAYLEDSYGLNLFESHTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT I +MI ++ + G AY + + FD + +YG S++ ID+ + G R+
Sbjct: 113 KATECINEMIEFVKVLEEKGIAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDISD 172
Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK+ EP WESPWG GRPGWH+ECS M+ YLG DIH GG DL F
Sbjct: 173 EKKNPLDFALWKKRKDETEPAWESPWGMGRPGWHLECSVMAKKYLGDTIDIHAGGEDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + + AN W+HNG +N++ KMSKS GNF TI ++ + +
Sbjct: 233 PHHENEIAQSECCNG-KVFANYWMHNGMINIDNVKMSKSKGNFFTIKDI-------QKEY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIRL +L THYR P++F+ + + + + L +
Sbjct: 285 DLEVIRLWILSTHYRNPLNFSREVMEQTKNGLDRMYNGKEHLERLLEICEEKEDGDISKL 344
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE 395
+ L + +DLNT AI +++L R + + + + + A +LG+
Sbjct: 345 VELKKEFLDCMDDDLNTADAISKVYELIRYTNTFGENTDLKVVKGAVKLLSDFASVLGLL 404
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+E + N+ +EKL++ER K K F AD IR L+ L+D +N +R+
Sbjct: 405 YKEE--DDNLDEKVEKLIKEREEARKNKDFKRADEIRDALKEMNIELKDTRNGVIWKRV 461
>gi|93005831|ref|YP_580268.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|109894926|sp|Q1QC19|SYC_PSYCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|92393509|gb|ABE74784.1| cysteinyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 488
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 181/499 (36%), Positives = 257/499 (51%), Gaps = 63/499 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IY++L + F+ + + MYVCG TVYD+ HIG+AR M+ FD+ R L
Sbjct: 11 MSQLVIYDSLTGRKQAFKPLATGKVGMYVCGMTVYDYCHIGHARVMVGFDMAVRWLAQLG 70
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRNITDIDDKII RA + + I +T + +D T L CL+P
Sbjct: 71 YD--VNYVRNITDIDDKIITRAAENG------EEIGTLTQRFITAMHEDATALGCLSPDA 122
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HI +M +I+ ++ + +AY N ++ + S +YG S+R +D+ + G+RV
Sbjct: 123 EPRATDHIDEMQQMIETLVSNDYAYAGDNGDVYYAVDSFADYGKLSKRNLDDMQAGSRVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K+NP DF+LWK + P EP W S WG+GRPGWHIECSAMS+ LG FDIHGGG DL
Sbjct: 183 VENDKRNPFDFVLWKAAKPDEPQWASAWGQGRPGWHIECSAMSTKCLGNTFDIHGGGHDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A E A W+H GF+N++G KMSKS GNF TI +++
Sbjct: 243 QFPHHENEIAQSEAATGCE-YARNWMHVGFINVDGEKMSKSLGNFFTIRDVMA------- 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
+ +R +L +HYR ++F+ L E+ LS+ Q
Sbjct: 295 KYLPETVRFFLLSSHYRSQVNFSDSALDESHNSLSRLYQALKVAEQQKGKVLIIDEALIN 354
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------DLLPIFNASAHI 391
+ + + A+ +D N+ +AI L LAR+ K L A A
Sbjct: 355 NAYASAVGQDFIKAMNDDFNSSTAISVLFGLARDINKASKAQDVETAWQLAQHLKALAQT 414
Query: 392 LGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
L I + + AI+ L+ ER K F+ AD IR QL+ G
Sbjct: 415 LNILQQPVQQFLQAVIGEVAEDSLTDEAIDGLIIERADAKTNKNFARADEIRVQLKEAGI 474
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
LED + T W++
Sbjct: 475 ELEDSR------AGTTWRR 487
>gi|306825734|ref|ZP_07459073.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432095|gb|EFM35072.1| cysteine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 447
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMEDIIRFVTDLIEKGYAYESQGDVYFRVEKSHNYARLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGSGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGIVDAGELQDFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++ + D N+ + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAVMDEDFNSANGITVVFEMAKWINSGNYDASVKKSLAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|302039377|ref|YP_003799699.1| cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300607441|emb|CBK43774.1| Cysteinyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 486
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 179/501 (35%), Positives = 260/501 (51%), Gaps = 60/501 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL F+ + P +RMYVCG TVYD+ HIG+AR +VFDVL R L Y
Sbjct: 1 MLRLYNTLSGSKEPFEPLVPGKVRMYVCGVTVYDYCHIGHARSALVFDVLRRYLEYSGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + +N TD+DDKII+RA+++ S +T+ + +D +L T +P
Sbjct: 60 -VVEFAKNFTDVDDKIIKRAKEQGVS------CEHVTTTYINAYYEDMEKLGVRRATLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI +++ L+ ++ G AY + ++ F YG S+R +D+ + G RV
Sbjct: 113 RATEHIAEIVRLVDTLLAKGMAYRVDGDVYFQVDRYAVYGRLSKRNVDDLQAGARVDVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAM+ +LG+ FDIHGGG+DLIFP
Sbjct: 173 RKRHPMDFALWKGSKPGEPSWDSPWGQGRPGWHIECSAMAMRHLGETFDIHGGGMDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSC A E A W+HNGF+ + KMSKS GNF TI E+ + ++ +
Sbjct: 233 HHENEIAQSCGATGKE-FARYWVHNGFVQINQEKMSKSLGNFFTIREIFQKSEW-PDTVT 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------------ 351
++R +L THYR P+DF+ Q L EA+ L+ + P
Sbjct: 291 GEMLRYFLLTTHYRSPLDFSDQSLKEAKNALNGFYDLFERLNESAPVHSPGDQSMQEAMV 350
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGIE 395
++A+ +DLNT +A+ AL L ++ K + F A +LG+
Sbjct: 351 RTREAFVAAMDDDLNTPNALAALQMLRGDTNKALEAGLSGEMRQMVRQEFRALGIVLGLL 410
Query: 396 V-----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ I + RL + K + AD +R +L S
Sbjct: 411 QTDTWRFKIQQQQPSSGGAEASTGTLSDEDIADKLAARLAAKRSKNYQLADQLRAELASH 470
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G +ED ++ + RWK+
Sbjct: 471 GITIEDRQDGTS-----RWKR 486
>gi|327472399|gb|EGF17830.1| cysteine--tRNA ligase [Streptococcus sanguinis SK408]
Length = 447
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKKEGIT------PKEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I +++++ G+AYE+ ++ F +Y + + + + ++G
Sbjct: 113 RVVEFMDDIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + +N W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFSNYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQTDSAQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|259047744|ref|ZP_05738145.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
gi|259035935|gb|EEW37190.1| cysteine--tRNA ligase [Granulicatella adiacens ATCC 49175]
Length = 469
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 167/490 (34%), Positives = 246/490 (50%), Gaps = 55/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYNTL R+ F+ I+ +RMYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIQIYNTLTRQKEAFKPIEEGKVRMYVCGPTVYNYIHIGNARSTVSFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII A + + ++ K + F +DT L T P
Sbjct: 61 --VNFVSNFTDVDDKIIRVANETGMTAE------EVSKKYIEAFFEDTNALNVKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV 179
N + +I + ++I G AYE+ ++ F T YG S ++I++ +M T
Sbjct: 113 TVMNTMDDIIAFVADLIDKGMAYESEGDVYFITEKFEGYGKLSDQRIEDLQMGASNRTAS 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K+NP DF LWK + P E W SPWG+GRPGWHIECS M++ +LG DIHGGG D
Sbjct: 173 EDDAKKRNPLDFALWKNAKPNEISWNSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS +K AN W+HN F+ + KMSKS GNF+ +++L+
Sbjct: 233 LAFPHHENEIAQSESKTG-KKFANYWMHNAFVTMGEEKMSKSLGNFVLVHDLI------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
+ V+R + HYR P+ F+ L EA + L K T +
Sbjct: 285 QQLDPQVLRFFLASAHYRRPLKFSEAALQEAAVNLEKVQTTFKNARYRLETAVDALPEDA 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAH 390
I+ + +D N + + L++ +E + L + +A
Sbjct: 345 ERLAKFAAIEADFQKEMDDDFNAANGMTVLYQWLKEWNVYLEQEVVSKAVLEALLEKAAV 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ GI E + I+ L++ERL K K F+ +D IR L+ +G +LED
Sbjct: 405 LFGIFGIVEKQEALLDDDIQALIEERLEARKAKNFARSDEIRDLLKEQGIVLEDT----- 459
Query: 451 GQRMTRWKQK 460
+ TRW+++
Sbjct: 460 -PQGTRWRRE 468
>gi|319943420|ref|ZP_08017702.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319743235|gb|EFV95640.1| cysteine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 506
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 175/527 (33%), Positives = 255/527 (48%), Gaps = 89/527 (16%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +K+YN+L R+ +FQ ++ + +YVCG TVYD+ HIG+AR ++ FDV+ R LR
Sbjct: 1 MARTLKLYNSLTRRKEDFQPLEAGRVGLYVCGMTVYDYCHIGHARMLVAFDVVQRWLRAR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII RA + + +S +T + +D L P
Sbjct: 61 GYQ--VTYVRNITDIDDKIIRRAVENG------ETLSSLTGRFIAAMHEDEAALGIQRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT ++PQM+ L+ + +G+AY + + + +F YG + +D+ + G RV
Sbjct: 113 LEPRATQYVPQMLDLVSLLEKNGYAYRSGDGDTLFRVRRFAGYGRLGGKSLDDLRAGERV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + P EP W+ P+G GRPGWH+ECSAMS+ LG+ FDIHGG
Sbjct: 173 AVAAGKEDPFDFVLWKAAKPEEPAEACWQGPFGPGRPGWHLECSAMSTRLLGRQFDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
G DL FPHHENEIAQS A + W+HNGF+ ++G KMSKS GNF TI ++L
Sbjct: 233 GADLQFPHHENEIAQSDAAYFPEGGKSFVRYWLHNGFVQVDGEKMSKSLGNFFTIRDVL- 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------- 340
+ + VIR ++ +HYR ++++ L +A L +
Sbjct: 292 ------KKFDGEVIRFFIVRSHYRSQVNYSDAGLDDARESLLRLYNALSTDWPAAQAQVE 345
Query: 341 ---------------------------------STSKGIIDPAVLSALYNDLNTVSAIQA 367
A+ +D NT A+
Sbjct: 346 GQAGQGAAVSAGAGQAAAAACADGEAARAAVAAIDWSEPRAMRFAEAMDDDFNTPVAVSV 405
Query: 368 LHKLARESTKNHD--LLPIFNASAHILGIEVCKE-------------HLNKNISIAIEKL 412
L +LA + + D + A +LG+ H AI+ L
Sbjct: 406 LFELATDLNRTRDPAIERQLRGLAAVLGLLGQDPVAVRRNGLRGAAAHEGDLDDNAIQAL 465
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
V RL K + F+ AD IR+QL G LED G T W++
Sbjct: 466 VDARLAARKARNFAEADAIRQQLAEAGITLED------GPAGTTWRR 506
>gi|315151334|gb|EFT95350.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0012]
Length = 478
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 168/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ H+GNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHLGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|289450440|ref|YP_003475062.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
gi|289184987|gb|ADC91412.1| cysteine--tRNA ligase [Clostridiales genomosp. BVAB3 str. UPII9-5]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 177/489 (36%), Positives = 255/489 (52%), Gaps = 59/489 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++++L + EF ++P ++MY CGPTVY++ H+GNARP +VFD+L R L Y
Sbjct: 1 MQLFDSLTNQKREFIPLEPGKVKMYSCGPTVYNYFHLGNARPFVVFDLLRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDK+I RA +E ++ + K ++ KD L T QPR
Sbjct: 59 KVTFVQNFTDIDDKMIRRANEEGVTL------RELADKYIAEYFKDADGLGIKRATIQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEK 182
AT I +I + ++ GHAY + + + F T S P+YG S +DE + RV
Sbjct: 113 ATESIDAIIEQVGKLVAGGHAYVSTDGVYFSTRSFPDYGKLSHFHLDELEAGASERVNTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K +PADF +WK P EP W SPWG GRPGWHIECS+M + YLG DIH GG DLIF
Sbjct: 173 ENKHDPADFAVWKFKKPGEPAWPSPWGEGRPGWHIECSSMINRYLGPTIDIHSGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA ++ A+ W+HNGF+N+ KMSKS GNF T+ +++ + +
Sbjct: 233 PHHENEIAQSECATG-KQLAHYWLHNGFINVNNEKMSKSLGNFFTVRDVV-------KHF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------------- 341
P VIR +L HYR PI+F+ + L A+ L++
Sbjct: 285 PYDVIRFFLLTGHYRSPINFSDELLQAAQTGLTRLRNCYSAVQFKLKSKAESAESADKAA 344
Query: 342 -------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPI 384
S A ++A+ +DLNT A+ A+ RE +L
Sbjct: 345 AAAESVRKSIDTARAAFIAAMDDDLNTPDALAAIFSWVREVNTLITSSPSAADCQAVLDF 404
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
F+ +LG+ + + I I LV+ R K K F+ AD +RKQ+ G+ L D
Sbjct: 405 FDELGDVLGL---RWQCEEAIPTEILALVEARTQAKKAKNFTLADELRKQITEAGYTLMD 461
Query: 445 YKNPDNGQR 453
++
Sbjct: 462 TPQGPRIEK 470
>gi|327533897|gb|AEA92731.1| cysteine--tRNA ligase [Enterococcus faecalis OG1RF]
Length = 478
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 170/495 (34%), Positives = 249/495 (50%), Gaps = 62/495 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 7 KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDKII+ A++ + P + + + F +DT L T
Sbjct: 67 YE--VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATL 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTR 178
PR +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 119 HPRVMDHMPDILTFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350
Query: 343 -------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
++ ++ + +D N + I +++LA+ + + +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
F+ I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 468 T------PQGTRWRR 476
>gi|171463666|ref|YP_001797779.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|229470557|sp|B1XUY8|SYC_POLNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|171193204|gb|ACB44165.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 473
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 187/492 (38%), Positives = 253/492 (51%), Gaps = 56/492 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R F+ I P ++MYVCG TVYDF HIG+AR MIVFD++ R LR E
Sbjct: 1 MLQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + + IS +T++ D+ L + P +P
Sbjct: 61 --VLYVRNITDIDDKIINRAIENG------EPISALTNRFVDAMHADSDELGLMHPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I QM +I +I + AY+ + ++ F +P YG S + +DE G RV
Sbjct: 113 RATDYIAQMQGMIGKLIENELAYQANDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGG D
Sbjct: 173 DGKRDPLDFVLWKSAKPEEPADTRWKSPWGEGRPGWHIECSAMSCDLLGEHFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIE-------KTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
L FPHHENEIAQS A + N W+HNG + + KMSKS GNF I ++L
Sbjct: 233 LQFPHHENEIAQSEGALYGKDRKVDDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL 292
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
+S+ VIR ML THYR PI+++ +L EA L +
Sbjct: 293 -------KSFDPEVIRFFMLKTHYRSPINYSDAQLEEARSGLVRLYTALAQGSKAQTISL 345
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILG 393
A+ +D NT AI L + E + ++L AS + L
Sbjct: 346 GSSNPWAKRFADAMNDDFNTPEAIAVLFDIVSEVNRAQGEEKQVLANILKALGASLNFLQ 405
Query: 394 ------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ + IE+ + R+ + K F+ AD IRK L +G +LED
Sbjct: 406 RDPTVFLQSSAKDQAGLSPEQIEEQIAARVAAKQAKDFAKADAIRKALLEQGIVLEDKPG 465
Query: 448 PDNGQRMTRWKQ 459
G W++
Sbjct: 466 GLTG-----WRR 472
>gi|172056119|ref|YP_001812579.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|229558633|sp|B1YGS9|SYC_EXIS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|171988640|gb|ACB59562.1| cysteinyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 465
Score = 387 bits (994), Expect = e-105, Method: Composition-based stats.
Identities = 169/483 (34%), Positives = 255/483 (52%), Gaps = 50/483 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YN++ K F+ ++ ++MYVCGPTVY++ HIGNARP IVFD + R Y +
Sbjct: 1 MIQLYNSMTGKKEPFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYFTYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII A + + + +T + + + DT L P
Sbjct: 61 --VKYVSNFTDVDDKIIRTANE------LGEDYHALTKRFIEAYHADTGALNVQKADIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T + +I I+ ++ G+AY ++ ++ F T S +YG S++ IDE + G R+
Sbjct: 113 LVTETMDDIIAFIEVLVKKGNAYASSGDVYFRTRSFKDYGQLSQQSIDELRSGARIEVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P EP W SPWG GRPGWHIECSAM+ YLG DIH GG DL FP
Sbjct: 173 KKEDPLDFVLWKAAKPGEPAWTSPWGEGRPGWHIECSAMAKKYLGDTIDIHAGGQDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + +K AN W+HNGFLN+E KMSKS GNF+T++E + ++
Sbjct: 233 HHENEIAQSEACN-SQKFANYWMHNGFLNIENEKMSKSLGNFLTVHEAI-------QAVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------------------QTST 342
V+R ML YR PI+++ + +A L++ +
Sbjct: 285 PMVLRFFMLSVQYRHPINYSRDLIDQAANGLARIRESVANVEHRLTMTADLGTATEKWLN 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
I ++++ +D NT +A+ L L++E+ L +F + +
Sbjct: 345 RIEEIKQHFVTSMDDDFNTANAVTDLFDLSKEANLYLGEDQVAKEVLERFLAVFQELSTV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + E + +E+L+++R K + F+ AD IR QL +G +LED
Sbjct: 405 LGVTLTIEK--GLLDEEVEQLIRDRDTARKERDFARADAIRDQLRDQGILLEDTAQGMRW 462
Query: 452 QRM 454
+R
Sbjct: 463 KRG 465
>gi|307276290|ref|ZP_07557417.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|306507033|gb|EFM76176.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|315149012|gb|EFT93028.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4244]
gi|315168265|gb|EFU12282.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1341]
Length = 478
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVADRFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|332359270|gb|EGJ37091.1| cysteine--tRNA ligase [Streptococcus sanguinis SK49]
Length = 447
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I +++++ G+AYE+ ++ F +Y + + + + ++G
Sbjct: 113 RVVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSRDYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSNQLQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKEAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRDELATQGIKLLDTKDGVRWTR 446
>gi|150392183|ref|YP_001322232.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|187629786|sp|A6TWK5|SYC_ALKMQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149952045|gb|ABR50573.1| cysteinyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 464
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 170/489 (34%), Positives = 249/489 (50%), Gaps = 58/489 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK F I+ +RMY CGPTVY++ HIGN R IVFD L + L Y +
Sbjct: 1 MRLYNTLTRKKEVFVPIEQGKVRMYACGPTVYNYFHIGNGRTFIVFDALRKYLVYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDKII++A++E S I+ + ++ KD L P+
Sbjct: 60 -VTFVQNFTDIDDKIIKKAQEEAVSA------KEISERFIVEYFKDAATLGVDQADIHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++P++I IQ ++ AYE N ++ +D S +YG S++ ++E + G R+
Sbjct: 113 VTENVPEIIAFIQELLEKNVAYEVNGDVYYDVSRFEDYGKLSKQNLEELQSGARIEVNEA 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N DF+LWK + P EP WESPWG GRPGWHIECSAM+ YLG+ DIHGGG DL+FPH
Sbjct: 173 KRNSLDFVLWKTAKPGEPSWESPWGSGRPGWHIECSAMAKKYLGETIDIHGGGGDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + AN WIH G+LN++ +KMSKS NF T E+ E +
Sbjct: 233 HENEIAQSEACTG-KTFANYWIHVGYLNIDNKKMSKSLDNFFTPREIAE-------EYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
+R ML HYR P++F+ + L A+ L + I
Sbjct: 285 ESLRFFMLSAHYRTPVNFSRELLESAKSGLERLYNAKNHLEHILENTKVEEMKETEKEWI 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
+ +D NT I + L R+ + +
Sbjct: 345 DSLTHYSEEFNRVMDDDFNTADGIAVIFDLVRDMNTYITGEASKEAVKAAYGMLVELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ +E +++ I +L++ R K F+ +D IR L+ KG +LED
Sbjct: 405 LGLLRKEE---ESLDKEIGRLIEARQQARIEKNFTKSDEIRDYLKEKGIVLEDT------ 455
Query: 452 QRMTRWKQK 460
+ +W+++
Sbjct: 456 SQGVKWRKE 464
>gi|312901251|ref|ZP_07760534.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
gi|311291628|gb|EFQ70184.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0470]
Length = 478
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 169/495 (34%), Positives = 249/495 (50%), Gaps = 62/495 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 7 KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDKII+ A++ + P + + + F +D L T
Sbjct: 67 YE--VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDAQALNVQPATL 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTR 178
PR +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350
Query: 343 -------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
++ ++ + +D N + I +++LA+ + + +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKL 410
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
F+ I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 468 T------PQGTRWRR 476
>gi|298290922|ref|YP_003692861.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
gi|296927433|gb|ADH88242.1| cysteinyl-tRNA synthetase [Starkeya novella DSM 506]
Length = 464
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 218/471 (46%), Positives = 286/471 (60%), Gaps = 30/471 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R F ++PS +RMYVCGPTVYDFAHIGNARP+IVFD+LYRLLR+ YG
Sbjct: 10 PELKLYNTLTRAKETFVPLEPSQVRMYVCGPTVYDFAHIGNARPVIVFDLLYRLLRHLYG 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRNITD+DDKI RA E P + +N+AI+ +T QF D L L P +
Sbjct: 70 AEHVKYVRNITDVDDKINARAASEFPGLDLNEAIAKVTFTTEAQFHDDLEALGVLHPDVE 129
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M LI+ ++ GHAY A + ++F S+P+YG S R +++ G RV
Sbjct: 130 PRATEHIAEMRVLIERLVASGHAYVAEDHVLFSVPSMPDYGQLSHRPLEDMIAGARVDVA 189
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+K++ DF+LWK S P EPGW SP G GRPGWHIECSAMS +LG+ FDIHGGG+D
Sbjct: 190 PYKQDAMDFVLWKPSKPGEPGWLSPAGIAVPGRPGWHIECSAMSWKHLGETFDIHGGGID 249
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE+AQS CA A +W+HNGFL +EG KMSKS GNF+TI +LL
Sbjct: 250 LVFPHHENEVAQSRCAFHANIMAKVWMHNGFLQVEGEKMSKSLGNFVTIRDLLAD----- 304
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--AVLSALYN 357
WP V+RL ML THYR+PID+TV+ L E+ L +W + P AVL AL +
Sbjct: 305 --WPGEVLRLNMLKTHYRQPIDWTVKGLEESAKTLEQWFDAAAPDAYPRPAAAVLEALAD 362
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE--VCKEHLNKNISI------AI 409
DLNT AI +H L K+H + LG E +E I
Sbjct: 363 DLNTPKAIAEMHAL-----KDHAGKKALAGTLAFLGFEPGPFREWAAAQAPELTIPEAEI 417
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
E + ER+ + + ++++D IR +L + G L+D K+ T W+ K
Sbjct: 418 EARIAERIEARRNRDWAASDRIRDELMALGVALKDNKDGT-----TTWEPK 463
>gi|315171290|gb|EFU15307.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1342]
Length = 478
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 248/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAKRFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|307268962|ref|ZP_07550326.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|307287137|ref|ZP_07567208.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|306501735|gb|EFM71026.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|306514770|gb|EFM83321.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|315033512|gb|EFT45444.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0017]
gi|315036335|gb|EFT48267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|315165683|gb|EFU09700.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1302]
gi|329576209|gb|EGG57727.1| cysteine--tRNA ligase [Enterococcus faecalis TX1467]
Length = 478
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVADRFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
++ ++ + +D N + I +++LA+ + + +F+
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPILVAMDKLFS 412
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT- 468
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 469 -----PQGTRWRR 476
>gi|17228587|ref|NP_485135.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|21264005|sp|Q8YXW5|SYC_ANASP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|17130438|dbj|BAB73049.1| cysteinyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 486
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 172/500 (34%), Positives = 249/500 (49%), Gaps = 58/500 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ + ++P ++MY CG TVYD+ H+G+AR IV+D + R L +
Sbjct: 1 MTLTIYNTLTRRQEPLETVEPGKVKMYCCGVTVYDYCHLGHARSYIVWDTIRRYLIWRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDKI+ RA+++ + ++ ++++ + D RL L
Sbjct: 61 G--VKYIQNFTDIDDKILNRAKEQGLT------MAEVSNRFIDAYFADIRRLNVLDADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-----GT 177
PR T HIP++ LIQ + G AY ++ + P+YG S R++++ +
Sbjct: 113 PRVTEHIPEIHQLIQILEEKGLAYAVGGDVYYRVERFPSYGKLSGRELEQMQAGASGRVD 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K++P DF LWK + P EP W+SPWG GRPGWHIECSAM LG DIHGGG
Sbjct: 173 AEDSEPKKQHPFDFALWKAAKPGEPAWDSPWGAGRPGWHIECSAMIRSKLGATIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK- 296
DLIFPHHENEIAQS A + A W HNG + + G+KMSKS GNFITI ELL+
Sbjct: 233 GDLIFPHHENEIAQSEAAMN-QPLARYWTHNGMVMVNGQKMSKSLGNFITIRELLDGVGS 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
+ +RL +L HYR+P+DFT + + AE W Q
Sbjct: 292 WKEDPVNPMAVRLFVLQAHYRKPLDFTEEAIATAENSWKTLKEGLLFGYQYGEKLGWGQE 351
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
S + +D N + L +LA+E + ++L
Sbjct: 352 SAIIPELATRFQELGDDDFNFSGGLAVLFELAKELRREGNILVHEGTTKTPSDELQRQWN 411
Query: 384 IFNASAHILGIEVCKEHLNK----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
A ILG+E + + IE L+++R K K FS +D IR +L+++G
Sbjct: 412 TLVTLAKILGLEAKLDDETQTQAGLSDTDIEALIEQRQAARKNKNFSESDRIRNELQAQG 471
Query: 440 FILEDYKNPDNGQRMTRWKQ 459
L D + TRW +
Sbjct: 472 VTLIDS------PQGTRWHR 485
>gi|145589043|ref|YP_001155640.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|187629841|sp|A4SX62|SYC_POLSQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145047449|gb|ABP34076.1| cysteinyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 473
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 188/492 (38%), Positives = 254/492 (51%), Gaps = 56/492 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R F+ I P ++MYVCG TVYDF HIG+AR MIVFD++ R LR E
Sbjct: 1 MLQIYNTLSRSKQVFKPIVPGKVKMYVCGMTVYDFCHIGHARVMIVFDMVVRWLRASGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + IS +T++ D+ L + P +P
Sbjct: 61 --VQYVRNITDIDDKIIKRALENS------EPISALTNRFIAAMHADSDELGLMHPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT++I QM +I +I + AY+ + ++ F +P YG S + +DE G RV
Sbjct: 113 RATDYIQQMQGMIGKLIENELAYQGEDGDVNFAVRLLPRYGQLSGKTLDELNAGERVAIG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS LG FDIHGGG D
Sbjct: 173 GGKRDPLDFVLWKSAKPEEPADTRWNSPWGEGRPGWHIECSAMSCDLLGAHFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIE-------KTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
L FPHHENEIAQS A + N W+HNG + + KMSKS GNF I ++L
Sbjct: 233 LQFPHHENEIAQSEGALYGQNRQENDAPFVNYWMHNGHIRVNEEKMSKSLGNFFLIRDVL 292
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---- 348
+S+ V+R ML HYR PI+++ +L EA L++ T +D
Sbjct: 293 -------KSFDPEVVRFFMLKAHYRSPINYSDAQLEEARSGLTRLYTALTHIPEVDTVPI 345
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEV 396
A+ +D NT AI L LA E + L + + L
Sbjct: 346 DLQNPWAKRFADAMNDDFNTPEAIAVLFDLASEVNRAQGAEKQMLAGLLKSLGGTLNFLQ 405
Query: 397 CK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ + S IE+ + R+ + K F+ AD IRK L +G +LED
Sbjct: 406 RDPTNFLQAGSKDQSGLSSEQIEEHIAARVAAKQAKDFAKADGIRKALLEQGVVLEDKPG 465
Query: 448 PDNGQRMTRWKQ 459
+T W++
Sbjct: 466 G-----ITEWRR 472
>gi|167837113|ref|ZP_02463996.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 465
Score = 387 bits (993), Expect = e-105, Method: Composition-based stats.
Identities = 181/486 (37%), Positives = 255/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ HIG+AR ++VFDV+ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDVVQRWLRAA 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +TS+ T+ D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIQSLTSRFTRAMNVDFDALGVERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ + ++ + NYG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPQDPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 288 ----KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDVAPLDWSEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + + L A +LG+ +
Sbjct: 344 HARRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGVLGLLGREPREFLQ 403
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QAAGAARAGALEPEEIEAKIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|332978776|gb|EGK15466.1| cysteine--tRNA ligase [Psychrobacter sp. 1501(2011)]
Length = 508
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 183/505 (36%), Positives = 250/505 (49%), Gaps = 72/505 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY+++ F+ + + MYVCG TVYD+ HIG+AR M+ FDV+ R LR+ +
Sbjct: 25 LKIYDSMTTNKRSFEPLQVGKVGMYVCGMTVYDYCHIGHARVMVAFDVVSRWLRHLGFD- 83
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITDIDDKII RA + + I +T + +D L C +P +PR
Sbjct: 84 -VNYVRNITDIDDKIIARANENG------EEIGQLTERFITAMHEDAAALGCESPDAEPR 136
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI M+ +I + HAY +N ++ + + YG S+RK+++ + G+RV
Sbjct: 137 ATQHIDDMLQMIGTLEQKEHAYAASNGDVYYAVDTFEGYGKLSKRKLEDLQAGSRVDVDT 196
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF+LWK + EP W+S WG GRPGWHIECSAMS+ LG FDIHGGG DL FP
Sbjct: 197 DKKNPFDFVLWKAAKAGEPQWDSSWGGGRPGWHIECSAMSTKCLGNSFDIHGGGHDLQFP 256
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A AN W+H GF+N++G KMSKS GNF TI E++E +
Sbjct: 257 HHENEIAQSEAATGC-TYANNWMHVGFINVDGEKMSKSLGNFFTIREVME-------KFH 308
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
IR +L +HYR ++F+ L EA L++ Q + +
Sbjct: 309 PETIRFFILSSHYRSQVNFSDAALKEAHSGLTRVYQALKAAEAVLDTPVNAQSEATIDTA 368
Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIF 385
+ A+ +D NT AI L LA+E K
Sbjct: 369 SIDSEIRGYSANFIKAMNDDFNTPQAISVLFSLAKEVNKLARETENDQATAKLKAAAVTL 428
Query: 386 NASAHILGIEVCKE-----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
A L I K + I+ L+QER+ K F+ AD IR
Sbjct: 429 KGLAGTLNIGQVKPTEFLQAHIGSVDEEQMTDEQIDTLIQERIDAKANKNFARADEIRNL 488
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
L+ LED K + T W++
Sbjct: 489 LQQNNIELEDSK------QGTTWRR 507
>gi|116871622|ref|YP_848403.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|123460673|sp|A0AF38|SYC_LISW6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116740500|emb|CAK19620.1| cysteinyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 471
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLTREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|315640330|ref|ZP_07895447.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
gi|315483992|gb|EFU74471.1| cysteine--tRNA ligase [Enterococcus italicus DSM 15952]
Length = 468
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 171/494 (34%), Positives = 251/494 (50%), Gaps = 63/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYNTL RK FQ I+ ++MYVCGPTVY++ HIGN R + FD + R Y +
Sbjct: 1 MIQIYNTLTRKKEVFQPIEEGKVKMYVCGPTVYNYIHIGNGRSTVSFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII A++ N+ + ++ F +DT L P
Sbjct: 61 --VTYVSNFTDVDDKIIHAAKE------ANETALEVANRFIAAFYEDTEALHVKKADINP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +HIP +I I +I G+AYEA ++ + T YG S + IDE +
Sbjct: 113 RVMDHIPDIIDFISVLINKGYAYEAQGDVYYRTRKFTKYGQLSDQSIDELEIGASQRTGQ 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W SPWG GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQQIKEDPLDFALWKAAKADEISWSSPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + AN W+HNG++ + + +KMSKS GNF+T++EL+
Sbjct: 233 EFPHHENEIAQSEANTG-KPFANYWMHNGYVTIGEDDQKMSKSLGNFVTVHELV------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
+ V+R + T YR PI ++ L EA L + T +
Sbjct: 286 -KEVDPKVLRFFLATTQYRRPIRYSQTTLKEAATNLQRLKNTVDNVVFRQEKAVAQLASD 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
++ ++ + +D N + I ++LA+ + L
Sbjct: 345 ADKLTDLAKLEEQFITEMDDDFNAANGITVTYELAKWLNIYLEQSDVSQAVLAQGLSQLT 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ I GIE N+ + IE+L+++R K + F+ +D IR QL+ +G +LED
Sbjct: 405 SWLEIFGIEF----TNELVDADIEQLIEQRNQARKDRDFARSDEIRDQLKEQGIVLEDT- 459
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 460 -----AQGTRWRRE 468
>gi|240141599|ref|YP_002966079.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
gi|240011576|gb|ACS42802.1| cysteine tRNA synthetase [Methylobacterium extorquens AM1]
Length = 462
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 206/482 (42%), Positives = 283/482 (58%), Gaps = 49/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP- 119
YG VTY RN+TD+DDKI RA + + I +T QF +D L L
Sbjct: 61 YGAAHVTYARNVTDVDDKINARALERGIT------IRELTDGTLAQFHRDIRDLGVLMAG 114
Query: 120 ----------THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M LI+ +++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVVAGHAYVAEGHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GGLDLIFPHHENE+AQS C + A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STS 343
TI ++L+ WP V+RL ML THYR+PID+T++ L E+ +L +W + +
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
+ V+ AL +DLNT +A+ LH+LA S A A ++G + +
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSA------LKAGAGLMGFLAVTQAQRE 401
Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+E L+ ER K ++++D +R L + G ++D K+ T
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARVAKDWAASDRVRDALTALGVSVKDNKDGT-----T 456
Query: 456 RW 457
W
Sbjct: 457 TW 458
>gi|229547086|ref|ZP_04435811.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|312952479|ref|ZP_07771347.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|229307815|gb|EEN73802.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|310629575|gb|EFQ12858.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|315153507|gb|EFT97523.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|315155078|gb|EFT99094.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|315158521|gb|EFU02538.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0312]
Length = 478
Score = 386 bits (992), Expect = e-105, Method: Composition-based stats.
Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 7 KDMIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRG 66
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV N TD+DDKII+ A++ + P + + + F +DT L T
Sbjct: 67 YE--VNYVSNFTDVDDKIIKAAKELKITAP------EVADRFIKAFEEDTQALNVQPATL 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTR 178
PR +H+P ++ I+ +I G AYE ++ + T PNYG S + IDE +
Sbjct: 119 HPRVMDHMPDILAFIEVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRT 178
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG
Sbjct: 179 GVEQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQ 238
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 239 DLEFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI---- 293
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 ---QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLP 350
Query: 343 -------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PI 384
++ ++ + +D N + I +++LA+ + + +
Sbjct: 351 EDEHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKL 410
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
F+ I G+ E L + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 411 FSGWLAIFGLFFKNEEL---VDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLED 467
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 468 T------PQGTRWRR 476
>gi|325295505|ref|YP_004282019.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065953|gb|ADY73960.1| cysteinyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 472
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 191/486 (39%), Positives = 261/486 (53%), Gaps = 52/486 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+++NTL K EF+ ++ ++MYVCGPTVYD AHIG+AR IVFDV+ R Y
Sbjct: 1 MIRVFNTLTEKKEEFKPLNDKTVKMYVCGPTVYDHAHIGHARSAIVFDVIRRWFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN TD+DDKII+R+++E + K + + +D L PT++P
Sbjct: 60 -RVIYVRNYTDVDDKIIKRSKEEGI------PWYEVAKKYIESYEEDMKALNIKEPTYKP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HI ++I +I+ +I G+AYE+ ++ F YG S+RK +E G R+
Sbjct: 113 KVTEHIEEIIEMIKGLIAKGYAYESEGDVYFSVEKFSEYGKLSKRKTEELIAGARIEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+S EPGWESPWG GRPGWHIECSAM+ YLG+ DIHGGGLDLIFP
Sbjct: 173 KKKNPLDFALWKKSKEGEPGWESPWGIGRPGWHIECSAMAMKYLGRTMDIHGGGLDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + W+HNGF+ + KMSKS GNF TI ++L + +
Sbjct: 233 HHENEIAQSEAYTG-KSFVRYWLHNGFVMVNKEKMSKSLGNFFTIKDIL-------KEFS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
+ V+RL +L THYR PIDF+ +RL +AE + SK II+
Sbjct: 285 SDVLRLFLLSTHYRSPIDFSFERLKDAERSFGRLLNFIESKEIIEKLPTFEKNSEIFDVE 344
Query: 350 ----AVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------------PIFNA 387
SA+ +D NT A+ + +L +E+ D I +
Sbjct: 345 NYKLQFESAMDDDFNTARALGVIFELVKEANLIKDKAIKENKISNKEKETILKAIGIVES 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG ++ K+ I+ L+ R L K K F AD IR L+ G ILED +
Sbjct: 405 YLKLLGFKLEKKKQEGIEDELIKLLIDVRSELRKRKAFDLADKIRDGLKDLGIILEDLPS 464
Query: 448 PDNGQR 453
+R
Sbjct: 465 GTIYKR 470
>gi|157150688|ref|YP_001449668.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157075482|gb|ABV10165.1| cysteinyl-tRNA synthetase [Streptococcus gordonii str. Challis
substr. CH1]
Length = 447
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 237/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLREFVPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D + L T P
Sbjct: 61 --VNYISNFTDVDDKIIHRAKEEGIT------PKEVADKYIAAFREDVSALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I +++++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVVEFMADIIRFVEDLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS A + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSE-AKTCQTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSDQLQDFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAEVKTAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|146319578|ref|YP_001199290.1| cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
gi|146321776|ref|YP_001201487.1| cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|253752580|ref|YP_003025721.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
gi|253754406|ref|YP_003027547.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
gi|253756340|ref|YP_003029480.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
gi|145690384|gb|ABP90890.1| Cysteinyl-tRNA synthetase [Streptococcus suis 05ZYH33]
gi|145692582|gb|ABP93087.1| Cysteinyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|251816869|emb|CAZ52516.1| cysteinyl-tRNA synthetase [Streptococcus suis SC84]
gi|251818804|emb|CAZ56644.1| cysteinyl-tRNA synthetase [Streptococcus suis BM407]
gi|251820652|emb|CAR47412.1| cysteinyl-tRNA synthetase [Streptococcus suis P1/7]
gi|292559192|gb|ADE32193.1| Cysteinyl-tRNA synthetase [Streptococcus suis GZ1]
Length = 447
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 237/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ ++MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRDFVPLEEGKVKMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY+ N TD+DDKII+ A + + ++ K F +D T+L T P
Sbjct: 61 --VTYISNFTDVDDKIIKAANEAGMTT------KELSDKFIAAFKEDVTKLGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +++ ++I +Q +I G+AYEA ++ F + NY + + + + + G
Sbjct: 113 RVIDYMDEIIDFVQVLIDKGYAYEAAGDVYFRVEKVENYARLANKTLSDLEVGASGRVEG 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K++P DF LWK + E W SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGQLKEHPFDFALWKTAKSGEVSWGSPWGAGRPGWHIECSVMATEILGATIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS C + AN W+HN LN+ KMSKS GNF+T +++LE
Sbjct: 233 EFPHHTNEIAQSECKTG-QTFANYWMHNAMLNINDEKMSKSLGNFLTAHDMLE------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSAL--- 355
V+R + HYR P+++T + E + K T + +D + L
Sbjct: 285 QIDGQVLRFFLATQHYRRPLNYTEKAISDAEINLKYLKNTYTQPVQNSVDKSALELHLAA 344
Query: 356 -----YNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+D N + I A+ A+ + + F + GI +E +
Sbjct: 345 FEAAMDDDFNAANGITAIFDFAKWINSGNYDETVKEAFGKMLAVFGIVFEEE----VLDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 EIEALIAERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|288554704|ref|YP_003426639.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545864|gb|ADC49747.1| cysteinyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 465
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 173/488 (35%), Positives = 257/488 (52%), Gaps = 55/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YN+L +K F ++ ++MYVCGPTVY++ HIGNARP IV+D++ R L Y
Sbjct: 1 MAIQLYNSLTKKKETFVPMEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++ N TD+DDKII A + + + + + ++ +++ DT L
Sbjct: 61 E--VEFISNFTDVDDKIIRAAHE------LGEDVFAVANRFIEEYHNDTCALGVKKANKH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T IP++I + +I +AYE+ ++ F T YG S + ID+ + G R+
Sbjct: 113 PRVTETIPEIIEFVAKLIEKEYAYESGGDVYFRTKKFEGYGKLSSQSIDDLRSGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E WESPWG GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 ERKEDPLDFVLWKAAKEGEVSWESPWGDGRPGWHIECSAMVKKYLGDTIDIHAGGKDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + AN W+HNGF+N+ KMSKS GNF+ ++++ R
Sbjct: 233 PHHENEIAQSEALTG-KTMANYWMHNGFININNEKMSKSLGNFVLAHDII-------RQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
A V+R ML HYR PI+F+ + L A+ L + +S
Sbjct: 285 SAEVVRFFMLTAHYRSPINFSDELLDGAKNGLERLRTAVSSLEHRLGESADYGEKAEWLT 344
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
+ A + + +D N+ + I + LA+E+ + H + +F+ A +
Sbjct: 345 KISQLKEAFIKEMDDDFNSANGIAVMFDLAKEANRYLREEQTSKEVLHAFIDLFDELADV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI V + + + IE L++ER + + F AD IR QL+ +G +LED
Sbjct: 405 LGIVVRTQA--ELLDTEIEALIEERNETRRSRNFKRADEIRDQLKDQGILLEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 AQGVRWKR 464
>gi|291459364|ref|ZP_06598754.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
gi|291417963|gb|EFE91682.1| cysteine--tRNA ligase [Oribacterium sp. oral taxon 078 str. F0262]
Length = 469
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 174/486 (35%), Positives = 244/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT+ + EF+ I+ IRMYVCGPTVY+ HIGNARPMIVFD R + Y
Sbjct: 1 MRIYNTMSGRKEEFKPIEEGKIRMYVCGPTVYNLIHIGNARPMIVFDTFRRYMEYRGYRF 60
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV N TD+DDKII++A +E S IT + + KD L + PR
Sbjct: 61 --NYVSNYTDVDDKIIQKANEEGTS------CQRITERYIGEVEKDMKALNIEPASAHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRVP 180
AT I MI LI ++ G+AY + + ++T + NYG S + IDE + +V
Sbjct: 113 ATEEISGMISLIAELVEKGYAYASDDGTVYYNTKAFRNYGELSHKNIDELQSGLRELKVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++PADF+LWK EP W SPW GRPGWH EC M+ Y G DIH GG DL
Sbjct: 173 GEEKKRSPADFVLWKPKKEGEPYWNSPWSEGRPGWHTECCVMAPKYCGGRLDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ A E+ AN W+HN F+N++ +KMSKS GNF+T+ +++ +
Sbjct: 233 IFPHHENEIAQYEAAHG-ERFANYWMHNAFINIDHKKMSKSLGNFLTVRDVI-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
W V+R ML HYR P++F+ + + A+ L + +
Sbjct: 285 RWDPMVLRFYMLSAHYRNPLNFSAELMDSAKQSLERILTAVQRLRELSGRLSGEELLPGE 344
Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
+ +DLNT AI A+ +L R + + +L
Sbjct: 345 EKVREAAEEQRRNFNERMDDDLNTADAITAVFELVRIANSSVSEQSSAAICRYMLDTIVT 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI E + + +E+L++ER + K F AD IR +L S G L+D +
Sbjct: 405 LLSVLGIRT--ERKEEKLDREVEELIEERQKAREKKDFKRADEIRDRLLSMGISLKDTRE 462
Query: 448 PDNGQR 453
R
Sbjct: 463 GVKWSR 468
>gi|67922209|ref|ZP_00515723.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
gi|67855912|gb|EAM51157.1| Cysteinyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
Length = 482
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 172/492 (34%), Positives = 252/492 (51%), Gaps = 58/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R++ F + P + MY CG TVYD+ H+G+AR I++D++ R L++
Sbjct: 1 MTLKIYNTQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLKWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYV+N TDIDDKI+ RA+++ S ++ I+ + + + +D L +
Sbjct: 61 E--VTYVQNFTDIDDKILRRAQEQGVS------MADISERFIEAYFEDIRPLNVMDADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PR T++I + LI+ ++ +AY A+ ++ F + YG S R +
Sbjct: 113 PRVTDNISGIQQLIEVLLEKNYAYAADGDVYFHVEAFEQYGKLSGRSQSMMQAGASGRVA 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P HKK+P+DF LWK + P EP W+SPWG GRPGWHIECSAM LG+ DIHGG
Sbjct: 173 VSDPTNSHKKHPSDFALWKSAKPEEPAWDSPWGEGRPGWHIECSAMVRGLLGETIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A+ + A W+HNG + + G KMSKS GNF TI ELL
Sbjct: 233 GGDLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----------------EAEILLSKWPQT 340
R VIRL +L HYR+P+DFT + ++ E W +
Sbjct: 289 ---RPLEPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLLFGEKYGNRLGWEKN 345
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
+ + + +D N+ + L +LA+ + +LL
Sbjct: 346 QELDSAVIEQFKATVDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKITTDGEDLQRQWQ 405
Query: 384 IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
A ILG+E E +++ I KL+Q+R K+K ++ +D IR+QL+ G
Sbjct: 406 TLVHLAGILGLEAKSEVGSEDTNNFDQAEITKLIQQRNAARKVKDYAESDRIREQLQEMG 465
Query: 440 FILEDYKNPDNG 451
L D N +
Sbjct: 466 ITLIDQPNGETS 477
>gi|295096713|emb|CBK85803.1| cysteinyl-tRNA synthetase [Enterobacter cloacae subsp. cloacae NCTC
9394]
Length = 465
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 249/494 (50%), Gaps = 66/494 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ YVRNITDIDDKII+RA + ++ + + + KD L L P
Sbjct: 63 Y--NLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDS 114
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HI ++I + Q +I GHAY N +++F + P YG+ SR+ +D+ + G RV
Sbjct: 115 EPRATHHIHEIIDITQKLIERGHAYVADNGDVMFSVPTDPTYGALSRQDLDQLQAGARVD 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 175 VVDVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L +
Sbjct: 235 MFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------K 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 287 YYDAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKSVPAAGGEAFEARF 346
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE---- 399
+ + +D NT A L +ARE + + L + +LG+ +
Sbjct: 347 VEVMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDLFL 406
Query: 400 ----HLNKNISIAIEKLVQERLILLK---------MKKFSSADYIRKQLESKGFILEDYK 446
+ IE L++ RL + R +L G ILED
Sbjct: 407 QSGAQADDGEVAEIEALIKARLEARQAKDWAAADAA---------RNRLTEMGIILED-- 455
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 456 ----GPQGTTWRRK 465
>gi|74317920|ref|YP_315660.1| cysteinyl-tRNA synthetase [Thiobacillus denitrificans ATCC 25259]
gi|109894959|sp|Q3SHN1|SYC_THIDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|74057415|gb|AAZ97855.1| Cysteinyl-tRNA synthetase, class Ia [Thiobacillus denitrificans
ATCC 25259]
Length = 454
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 178/476 (37%), Positives = 251/476 (52%), Gaps = 41/476 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I N+L R EF + P +RMYVCG TVYD H+G+AR +VFD++ R LR
Sbjct: 1 MLHITNSLTRTKEEFVPLSPGRVRMYVCGMTVYDLCHLGHARVFVVFDMVTRWLRASGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + + +T + + +D L L P H+P
Sbjct: 60 -AVEYVRNITDIDDKIIKRAHENK------ETPAALTERFIAEMHEDERALGVLPPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ QM+ LI ++ G AY A N ++ + P YG S + +DE + G RV
Sbjct: 113 RATAYVAQMLALIAQLVDRGLAYAAPNADVYYSVRGFPAYGRLSGKSLDELRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP WESPWG+GRPGWHIECSAMS+ LG+ FDIHGGG DL F
Sbjct: 173 PNKRDPMDFVLWKAAKPGEPAWESPWGQGRPGWHIECSAMSAELLGQHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+L + +
Sbjct: 233 PHHENEIAQSEGAHGC-TFVNYWLHNGFVRVDNEKMSKSLGNFFTIREVL-------QKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A ++R +L HYR P++++ L +A L++
Sbjct: 285 DAEIVRFFILRAHYRSPLNYSDAHLDDARGALTRLYTALKGAPAAGPVDWDAPAAARFRG 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIEVCKEHL--------NKN 404
A+ +D NT AI L +LA E+ + ++G+
Sbjct: 345 AMDDDFNTPEAIAVLFELAAEANRGDTGAAQTLRNLGAVIGLLQRDASDFLQAGTSEAGL 404
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ IE + R K + F+ +D IR +L + G +LED G T W+++
Sbjct: 405 DASEIEARIAARQAARKARDFAESDRIRDELAAAGIVLED------GPGGTTWRRQ 454
>gi|288550004|ref|ZP_05968971.2| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
gi|288316405|gb|EFC55343.1| cysteine--tRNA ligase [Enterobacter cancerogenus ATCC 35316]
Length = 465
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 170/494 (34%), Positives = 249/494 (50%), Gaps = 66/494 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 3 SSMLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLG 62
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ YVRNITDIDDKII+RA + ++ + + + D L P
Sbjct: 63 Y--NLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHNDFDALNIQRPDS 114
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HI ++I + + +I GHAY N +++F + P YG SR+ +++ + G RV
Sbjct: 115 EPRATHHIHEIIDITEKLIERGHAYVADNGDVMFSVPTDPTYGQLSRQDLEQLQAGARVD 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LGK FDIHGGG DL
Sbjct: 175 VVDVKRNPMDFVLWKMSKAGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L +
Sbjct: 235 MFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------K 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ A +R ++ HYR ++++ + L +A L + +
Sbjct: 287 YYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVPAAGGEAFEARF 346
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE---- 399
+ + +D NT A L +ARE + + L + +LG+ +
Sbjct: 347 VEVMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALASHLRKLSSVLGLLEQEPDAFL 406
Query: 400 ----HLNKNISIAIEKLVQERLILLK---------MKKFSSADYIRKQLESKGFILEDYK 446
++ IE+L++ RL + R +L G ILED
Sbjct: 407 QSGAQADEGEVAEIEQLIKARLEARQAKDWAAADAA---------RNRLTEMGIILED-- 455
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 456 ----GPQGTTWRRK 465
>gi|270307505|ref|YP_003329563.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
gi|270153397|gb|ACZ61235.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. VS]
Length = 457
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 177/477 (37%), Positives = 241/477 (50%), Gaps = 42/477 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ EF ++ ++MYVCG T HIG+A I FDV+ R L Y
Sbjct: 1 MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDIDDKII +A + S + +N F+ L + PR
Sbjct: 59 RVKYIQNFTDIDDKIIAKANAQGIE------PSTLAERNIGVFLDAMAALNITPADYYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +P++I ++ +I G+AYEA + + YG S R +++ G RV
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQVDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C ++ W+HNG L L KMSKS GN +TI E L + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------IDPAVL 352
+R+ +L + YR P+ ++ + L AE + QT+ +
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPQSNETNVDVKTYRERFT 345
Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEVC--KEHLNK 403
+ ND NT +A+ + L+RE K+ D +F A ILG+ + +
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEAEGGKSTDGQKLFKELADILGLSLKIAEPETGT 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ IE L++ R L K++ AD IR L+S G +LED T WK K
Sbjct: 406 DAVPFIELLIELRKDLRLAKQYQLADKIRTSLDSAGILLEDS------AGGTVWKAK 456
>gi|121605784|ref|YP_983113.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
gi|187629840|sp|A1VRB4|SYC_POLNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120594753|gb|ABM38192.1| cysteinyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
Length = 463
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 173/484 (35%), Positives = 250/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + +F + P +RMYVCG T+YD HIG+AR M+ FDV+ R L+
Sbjct: 1 MSLRIYNTLSRAVEDFSPLVPGQVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRNITDIDDKII+RA + + I +T + +D L PT +
Sbjct: 61 E--VRYVRNITDIDDKIIKRAVERGIT------IRALTDEMIAAMHQDIGALGIEPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY ++ ++ + P YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLAMIGKLEEKGLAYRGSSGDMNYAVRKFPGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWES-----PWGRGRPGWHIECSAMSSHYLGKVFDI 233
K +P DF+LWK + EP W+S +G+GRPGWHIECSAMS LG+ FDI
Sbjct: 173 LEGKDDPLDFVLWKSAKESEPEDAKWDSAALGHDYGKGRPGWHIECSAMSCQTLGETFDI 232
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG DL FPHHENEIAQS A+ + A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 HGGGADLQFPHHENEIAQSEGANG-KPLARFWVHNGFVRVDNEKMSKSLGNFFTIRDVL- 290
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STS 343
+ + A IR ++ HYR ++++ L +A L +
Sbjct: 291 ------QKYDAETIRFFIIRAHYRSALNYSDAHLDDARNSLKRLYTALALVAPATVEIDW 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCKEHL 401
+A+ D T AI L +LA E K + + + + LG+ +
Sbjct: 345 ADPFAARFKAAMDEDFGTPEAIAVLFELAGEVNKTHSAERAGLLKSLGACLGLLQGEPSA 404
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
AI+ L+ +R K + F++AD IR +L +G +L+D T
Sbjct: 405 YLQAGAGLDDAAIQALITQRADAKKARDFAAADRIRTELLGQGIVLKDS------PLGTT 458
Query: 457 WKQK 460
W+ +
Sbjct: 459 WEVQ 462
>gi|119485660|ref|ZP_01619935.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
gi|119456985|gb|EAW38112.1| Cysteinyl-tRNA synthetase, class Ia [Lyngbya sp. PCC 8106]
Length = 481
Score = 386 bits (991), Expect = e-105, Method: Composition-based stats.
Identities = 184/502 (36%), Positives = 254/502 (50%), Gaps = 66/502 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R F ++P +++MY CG TVYD+ H+G+AR I +DV+ R L +
Sbjct: 1 MALKIYNTQTRTKETFIPLEPQHVKMYCCGVTVYDYCHLGHARSYIFWDVVRRYLEWLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDKI+ RA++E N ++ ++ + + + +D RL
Sbjct: 61 --TVQYVQNFTDIDDKILNRAKKE------NSSMEAVSERFIEAYYEDLRRLNIRDADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
PRAT++I ++ LIQ + G+AY + ++ + P YG S RK D+ + G
Sbjct: 113 PRATDNISEIYQLIQQLEKKGYAYASKGDVFYSVEKFPEYGKLSGRKQDQLQAGASGRVS 172
Query: 181 -EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ KK+ +DF LWK S P EP W+SPWG GRPGWHIECSAM LG DIHGGG D
Sbjct: 173 GAEGEKKHSSDFALWKASKPGEPAWKSPWGEGRPGWHIECSAMVRQLLGATIDIHGGGGD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ E A W+HNGF+ + G KMSKS GNF TI +LLET
Sbjct: 233 LIFPHHENEIAQSEAAN-CEPLARFWMHNGFVTVGGEKMSKSLGNFTTIRQLLETV---- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTSTSKGII 347
VIRL + HYR+P+DFT +T AE + K +
Sbjct: 288 ---DPMVIRLFVFQAHYRKPLDFTPDAITSAENGWNTLCEGLLFKSQHGEKLGWLDKNDL 344
Query: 348 DPAVLSA--------LYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
PA+ S + +D NT + L +LA+E ++L
Sbjct: 345 PPALHSEAVERFQIAMDDDFNTPGGLAVLFELAKELRTEGNILTHEGKTETPLPQIQQTW 404
Query: 384 -IFNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A +LG+EV E + IE L+Q+RL K K ++ D IR +L+
Sbjct: 405 WTLVQLAEVLGLEVKPEDTSIPTASGLSDQEIEDLIQQRLAARKAKNYAEGDQIRDRLKE 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
G L D + T W +
Sbjct: 465 AGITLIDRPGGE-----TVWHR 481
>gi|306829040|ref|ZP_07462231.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
gi|304428845|gb|EFM31934.1| cysteine--tRNA ligase [Streptococcus mitis ATCC 6249]
Length = 447
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 236/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ S ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDSKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + I K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEIADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDIQELQDFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIETLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|270293221|ref|ZP_06199432.1| cysteine--tRNA ligase [Streptococcus sp. M143]
gi|270279200|gb|EFA25046.1| cysteine--tRNA ligase [Streptococcus sp. M143]
Length = 450
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 160/469 (34%), Positives = 237/469 (50%), Gaps = 36/469 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MDRMIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V Y+ N TD+DDKII RA++E + + K F +D T L T
Sbjct: 61 GYE--VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPAT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR + +I ++++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RHPRVVEFMADIIRFVEDLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGR 172
Query: 181 EKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ + LWK + E W+SPWG GRPGWHIECS MS+ LG DIHGGG
Sbjct: 173 TDEETARKENPVDFALWKTAKTGEISWDSPWGAGRPGWHIECSVMSTGILGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L
Sbjct: 233 ADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGII 347
++ V+R HYR+PI+FT + + +AE L T
Sbjct: 287 --KTIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAQELQDF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKN 404
++A+ D N + I + ++A+ + + A + GI +E
Sbjct: 345 KDKFVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----V 400
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 LDAEIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 449
>gi|195978850|ref|YP_002124094.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|229558791|sp|B4U570|SYC_STREM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|195975555|gb|ACG63081.1| cysteinyl-tRNA synthetase CysS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 448
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 165/467 (35%), Positives = 237/467 (50%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + EF I + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MMIKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEYAGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A++ S + + F++DT L T
Sbjct: 61 --TVNYISNFTDVDDKIIKAAKEAGLS------PKQLADQFIAAFMEDTKALGVKPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +++ ++I I +I G+AYE+ ++ F + NY + + I + + G
Sbjct: 113 PRVMDYMDEIIAFIAALIKKGYAYESAGDVYFRVAKASNYARLANKTIADLEAGASGRTD 172
Query: 183 YH---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W SPW GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 TETALKENPLDFALWKSAKPGEVSWTSPWSAGRPGWHIECSVMATELLGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS A + AN W+HNGF+N++ KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHTNEIAQSE-AKTSKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLL------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ +R + HYR+PI+FT + + +AE+ L T
Sbjct: 285 KTVDGQTLRFFLATQHYRKPINFTEKAIHDAEVNLKYLKNTLQQPTVATADSSQLAAFVT 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
A +A+ +D NT + I L +A+ + + F + GI E +
Sbjct: 345 AFKAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAES----LD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L+ ER + F+ AD IR QL ++G L D K+ R
Sbjct: 401 TEIEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKDGVRWIR 447
>gi|83748223|ref|ZP_00945249.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207743491|ref|YP_002259883.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
gi|83725064|gb|EAP72216.1| Cysteinyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206594889|emb|CAQ61816.1| cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs) protein
[Ralstonia solanacearum IPO1609]
Length = 465
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 256/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + I +T + +D L P
Sbjct: 60 AYD--VTYVRNITDIDDKIIKRAVENG------ETIGALTDRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ A+ ++ + P YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQ+ A+ N W+HNGF+ + KMSKS GNF TI E+L
Sbjct: 232 GADLQFPHHENEIAQAEGANGN-TFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-- 401
A+ +D NT A+ L +LA E K L+ A ++G+ H
Sbjct: 344 SHGQRFREAMNDDFNTPVAMAVLFELASEVNKTRSPALVNQLAALGGVMGLLGRDPHAFL 403
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + +E ++ R + + F+ AD IR L + G +LED
Sbjct: 404 QGGVGAAADGLDAAEVEARIEARRVAKAERDFARADGIRADLLAAGIVLEDKPGG----- 458
Query: 454 MTRWKQ 459
+T W++
Sbjct: 459 VTEWRR 464
>gi|332526279|ref|ZP_08402408.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332110113|gb|EGJ10741.1| cysteinyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 457
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 179/478 (37%), Positives = 252/478 (52%), Gaps = 43/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL R++ F ++P +RMYVCG TVYD H+G+AR + FDV+YR L+
Sbjct: 1 MTLRLHNTLTRRLETFVPLEPGRVRMYVCGITVYDLCHMGHARMNLAFDVVYRWLKASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRNITDIDDKII RA + I +T + +D L PTH+
Sbjct: 61 E--VTYVRNITDIDDKIIRRALERGVG------IRALTDEMVAAMHRDFAALGLEPPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +PQM+ +I + +G AY + ++ F P YG S + +DE + G RV
Sbjct: 113 PRATEFVPQMLDIIGRLERNGLAYRAEDGDVNFAVRRFPGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF+LWK + P EP W+SP+G GRPGWHIECSAMS LG+ FD+HGGG+
Sbjct: 173 AGGKEDPLDFVLWKSAKPEEPAEAKWDSPFGAGRPGWHIECSAMSCALLGERFDLHGGGM 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A N W+HNGFLN++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGAFG-HPFVNYWLHNGFLNVDNEKMSKSLGNFFTIADVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
+ + +R ML THYR P +F L EA L + +
Sbjct: 286 -KKFDGETVRFFMLRTHYRSPFNFADSLLDEARAALRRLYTALDGADAVACEVDWSDPRA 344
Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLL--PIFNASAHILGIEVCKEHL----- 401
+A+ +D NT A+ L +LA E ++ D + + +LGI
Sbjct: 345 AAFKAAMDDDFNTPGALAVLFELANEFNRSRDAAMARLLVSLGAVLGILQQAPRAFLQAG 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I + ++ R + ++F+ AD IR +L ++G L+D + T W +
Sbjct: 405 TGVDDAEIARQIEARATAKRERRFADADRIRAELAAQGVELKDT------PQGTTWVR 456
>gi|261409541|ref|YP_003245782.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261286004|gb|ACX67975.1| cysteinyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 468
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 168/490 (34%), Positives = 249/490 (50%), Gaps = 54/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R F A +P +++YVCGPTVYD+ HIGNARPMI FDV+
Sbjct: 1 MALQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I +A Q ++P + K + +D L T
Sbjct: 61 D--VNYVVNFTDVDDKMIRKAEQTGTTVP------EVAEKFINAYYEDLDGLGIPRATLN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+++ +I IQ +I AYE ++ + T +YG S++ +DE + G R+
Sbjct: 113 PRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK + P E W SPWG GRPGWHIECSAM+ YLG DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS + AN W+HNG++ + KMSKS GN + + EL E +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+R ML THYR P++++ + + +A+ + + + +
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQD 344
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHI 391
+ + +D NT AI A+ + A E+ + DL + A +
Sbjct: 345 VADKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEM 404
Query: 392 LG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
G + + ++ + IE L+ ER+ K K ++ AD IR +L +G +LED
Sbjct: 405 NGVLRIVNNGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDT----- 459
Query: 451 GQRMTRWKQK 460
+ RW++K
Sbjct: 460 -AQGMRWRRK 468
>gi|313201928|ref|YP_004040586.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
gi|312441244|gb|ADQ85350.1| cysteinyl-tRNA synthetase [Methylovorus sp. MP688]
Length = 470
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 182/477 (38%), Positives = 257/477 (53%), Gaps = 43/477 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K YN+L R+ F I + MYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 15 MLKFYNSLAREKQTFVPIVAGKVSMYVCGMTVYDYCHLGHARVMVVFDMVNRWLRTSGYD 74
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA++ ++I +TS+ +D RL + P +P
Sbjct: 75 --VTYVRNITDIDDKIIKRAQENG------ESIQALTSRFITAMDEDAARLGVMRPDLEP 126
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT HI M+ +I +I G AY N ++ + SS YG S + +++ + G RV
Sbjct: 127 KATEHITGMLDMIAALIEKGFAYPADNGDVFYSVSSFAGYGKLSGKSLEDLRAGERVEID 186
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM + +LG FDIHGGG DL F
Sbjct: 187 QYKRDPMDFVLWKAAKPGEPSWDSPWGKGRPGWHIECSAMGACHLGPHFDIHGGGQDLQF 246
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+HNGF+ ++ KMSKS GNF TI ++LE +
Sbjct: 247 PHHENEIAQSEAANGC-TFVNYWMHNGFIRVDDEKMSKSLGNFFTIRQVLE-------KY 298
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
A V+R +L YR P++++ L +A L++ T +
Sbjct: 299 DAEVVRFFILRAQYRSPLNYSDHHLDDARQALTRLYTALRGLALPTFTIDWQQPQAARFK 358
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG----------IEVCKEHLN 402
+A+ +D NT A L +LA E + L A E
Sbjct: 359 AAMDDDFNTSEAFAVLFELASEVNRTASLADAALLKALAGLLGLLQRDPETFLQGGESAQ 418
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+ +Q RL + K F+ AD IRKQL +G +LED + T W++
Sbjct: 419 GRSADEIEQFIQLRLQARQSKNFAEADRIRKQLADEGILLEDS------PQGTSWRR 469
>gi|329298451|ref|ZP_08255787.1| cysteinyl-tRNA synthetase [Plautia stali symbiont]
Length = 461
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 181/483 (37%), Positives = 249/483 (51%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ E + I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIYNTLSRQKEELKPIHACEIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYVGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++I +T++ + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESIETLTNRMIAEMHKDFAALGILPPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I LI +I GHAY N +++FD S +YG SR+ +++ + G RV
Sbjct: 113 RATRHIGEIIELIGKLIDRGHAYVADNGDVMFDVLSDKDYGVLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKADEPAWNSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEVAQSTCAHD-GPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++ L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNDGEDNLNQARAALERLYTALRHTDASATPAGGEAFEARFRT 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L A +LGI
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKSEDKAAADALAAKLRQLADVLGILQQDPEQFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+N + IE V+ R K ++ AD R +L G I+ED G + + W
Sbjct: 405 GAQVNADEVAEIEHWVKTRANARAAKDWAQADIARDKLNELGVIVED------GPKGSSW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|311070741|ref|YP_003975664.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|310871258|gb|ADP34733.1| cysteinyl-tRNA synthetase [Bacillus atrophaeus 1942]
Length = 466
Score = 385 bits (990), Expect = e-105, Method: Composition-based stats.
Identities = 164/489 (33%), Positives = 257/489 (52%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I A + +P I+ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIRAADELGEDVPT------ISERFIKAYFEDVGALGCKKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I +Q +I G+AYE++ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVTENMDAIIDFVQELIKKGYAYESDGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W++PWG+GRPGWHIECSAM YLG+ DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDAPWGKGRPGWHIECSAMVKKYLGEQIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
++R ML HYR PI+++ + L + ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLENTKNAFNRLKTAYSNLLHRLNSSTNLTADDDEWL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I+ A+ +D NT +AI L +LA+ + + + +F+ A
Sbjct: 345 KKIEEHRTAFEEAMDDDFNTANAISILFELAKHANYYLQEDNTADKVINAFIEMFDRIAS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + ++ L + +E+L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGLTMGEQEL---LDQDVEELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|89900143|ref|YP_522614.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
gi|89344880|gb|ABD69083.1| cysteinyl-tRNA synthetase [Rhodoferax ferrireducens T118]
Length = 470
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 173/472 (36%), Positives = 244/472 (51%), Gaps = 38/472 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R I + P ++RMYVCG TVYD H+G+AR M+ FDV+ R L+
Sbjct: 12 MSLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSG- 70
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRN+TDIDDKII+RA + ++I +T + +D L PTH+
Sbjct: 71 -LRVTYVRNVTDIDDKIIKRALENG------ESIRALTERMVDALHQDADALGIERPTHE 123
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +PQM+ LI + G AY+A N ++ + P YG S + +DE + G RV
Sbjct: 124 PRATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVAV 183
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + P EP W+S +G+GRPGWHIECSAM LG+ DIHGGG
Sbjct: 184 ADGKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGA 243
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A+IW+HNGF+ + KMSKS GNF TI ++L
Sbjct: 244 DLQFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILAR---- 298
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII 347
+ A R ++ HYR ++ + L +A L + +
Sbjct: 299 ---YDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKRLYTALDLVAPEPLLEIDWRQPF 355
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
+A+ D T A+ + +LA E K D L + A LG+ +
Sbjct: 356 AARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQA 415
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +I L+ +R K F+ AD IR+ L ++G +L+D +
Sbjct: 416 GATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAGTVWE 467
>gi|319941120|ref|ZP_08015456.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319805477|gb|EFW02279.1| cysteinyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 468
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 187/482 (38%), Positives = 257/482 (53%), Gaps = 41/482 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IY+TL R+ F++++P +RMYVCG TVYD+ HIG+ R + FDV+ R L
Sbjct: 1 MLSIYSTLTREQRPFESLEPGRVRMYVCGVTVYDYCHIGHGRTFVAFDVVRRWLEASGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITD+DDKII RA + + +T + + +D L CLAPT +P
Sbjct: 60 -KVTFVRNITDVDDKIIRRAAERGVTT------DELTDEFARAMQEDMLALGCLAPTFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +IPQM+ LI + G AY A+ ++ + PNYG S + ID+ + G RV E+
Sbjct: 113 RATQYIPQMLNLIGKLEEKGFAYHAADGDVDYAVRKFPNYGRLSGKSIDDLQSGARVQER 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP W+S WG GRPGWHIECSAM+ LG+ DIHGGG DL+F
Sbjct: 173 EGKHDPLDFVLWKSAKPGEPQWDSKWGCGRPGWHIECSAMAMDLLGETIDIHGGGPDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLE-----GRKMSKSNGNFITINELL-ETKK 296
PHHENEIAQS A + A W+H+G L + KMSKS GNF TI + L ET
Sbjct: 233 PHHENEIAQSEAATG-HQFARTWMHSGPLRVRSADGKEEKMSKSLGNFWTIRDALKETNA 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
G A V+R +L + YR PI F+ + EA L +
Sbjct: 292 AYGEGCGAEVLRFFLLRSQYRSPITFSSVLIEEAHKALVRLYTALKGRAADRAALDWNEP 351
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----FNASAHILGIEVCKE-- 399
+A+ +D NT A+ L +LA E + + +ILG+E K
Sbjct: 352 FAARFKAAMDDDFNTALAVSVLFELATEINRTGSPALVRQLLGLGRILNILGMEPEKFLQ 411
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + IE L++ER + K K F+ AD IRK L ++G L+D G T W
Sbjct: 412 GGAEASDDASRIEGLIEERALAKKAKNFARADEIRKSLLAEGIELQD------GAAGTTW 465
Query: 458 KQ 459
++
Sbjct: 466 RR 467
>gi|146310641|ref|YP_001175715.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
gi|145317517|gb|ABP59664.1| cysteinyl-tRNA synthetase [Enterobacter sp. 638]
Length = 465
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 172/496 (34%), Positives = 249/496 (50%), Gaps = 67/496 (13%)
Query: 1 MKK-KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M+ +KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MESLMLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRF 60
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
+ YVRNITDIDDKII+RA + ++ + + + KD L L P
Sbjct: 61 LGY--TLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRP 112
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+PRAT+HI ++I + + +I GHAY +N +++F + P YG SR+ +++ + G R
Sbjct: 113 DSEPRATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGAR 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG
Sbjct: 173 VDVVDVKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGS 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS CA E N W+H+G + ++ KMSKS NF T+ ++L
Sbjct: 233 DLMFPHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLDNFFTVRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDP 349
+ + A +R ++ HYR ++++ + L +A L + +
Sbjct: 286 -KYYDAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL 401
+ + +D NT A L +ARE + + L A +LG+
Sbjct: 345 RFIDVMNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPET 404
Query: 402 --------NKNISIAIEKLVQERLILLK---------MKKFSSADYIRKQLESKGFILED 444
+ + IE L+ RL + R +L G +LED
Sbjct: 405 FLQSGAQNDGDEVAKIEALITARLEARQAKDWAAADAA---------RNRLTEMGIVLED 455
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 456 ------GPQGTIWRRK 465
>gi|328675472|gb|AEB28147.1| Cysteinyl-tRNA synthetase [Francisella cf. novicida 3523]
Length = 459
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 178/478 (37%), Positives = 250/478 (52%), Gaps = 47/478 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
YN+L + +F+ I+ + I+MY CG TVYD HIG+AR I FDV+ R +Y + V
Sbjct: 3 FYNSLSGQKEQFKPIEANKIKMYACGVTVYDDCHIGHARTYIAFDVINRYFKYRGYD--V 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T VRNITDIDDKII+RA + ++ + + +N + RL L P+ +P+AT
Sbjct: 61 TLVRNITDIDDKIIKRANENG------ESTTELVERNIKAMHDVFARLNILKPSKEPKAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
IP+MI +I+ +I G+AY+ AN ++ + S +YG S++ ++ + G+RV K
Sbjct: 115 ETIPEMIAMIETLIEKGYAYQGANGDVFYRVSKFADYGKLSKQNLEALQQGSRVDVVEEK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF+LWK + EP W+SPWG GRPGWHIECSAMS LG FDIH GG DL FPHH
Sbjct: 175 ENPIDFVLWKMAKEGEPAWDSPWGAGRPGWHIECSAMSKKLLGDTFDIHAGGSDLRFPHH 234
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIAQS + AN W+H+G + + KMSKS NF TI E+LE +
Sbjct: 235 ENEIAQSEACNEC-TFANYWLHSGMVKVNAEKMSKSLNNFFTIVEVLE-------EYHPE 286
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVLSA 354
V+R + T YR I+++ + L A+ + K T + + A
Sbjct: 287 VVRYFLASTVYRSEINYSKENLENAKASVEKLFNTLRDIEPVEVNLPDDASEYEEKFIKA 346
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK-----EHL 401
+ ND NT A+ L LA+E K + +LGI +
Sbjct: 347 MDNDFNTPEALAVLFSLAKEINTLKTTNKYKASGYAYLLRKLCDVLGILFTDIEEYFKQG 406
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ IE+L+ ER K K + AD IR QL+ +G ILED T WK+
Sbjct: 407 DSVDVGEIERLIVERTQAKKDKNYLRADEIRNQLQEQGIILEDSAT------GTTWKK 458
>gi|90420879|ref|ZP_01228784.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
gi|90334854|gb|EAS48626.1| cysteine--tRNA ligase [Aurantimonas manganoxydans SI85-9A1]
Length = 494
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 243/494 (49%), Positives = 318/494 (64%), Gaps = 42/494 (8%)
Query: 3 KKIKIYNTLERKITEFQAID---PSN------IRMYVCGPTVYDFAHIGNARPMIVFDVL 53
+ + ++NT++R EF+ +D P +RMYVCGPTVYD+AHIGNARP+IVFDVL
Sbjct: 6 RGLTLWNTMKRAKEEFRPLDWQDPGKAEAGRHVRMYVCGPTVYDYAHIGNARPVIVFDVL 65
Query: 54 YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
YRLLR+ YG VTYVRNITD+DDKI RA +++P +P+N AI+ +T QF D
Sbjct: 66 YRLLRHLYGADHVTYVRNITDVDDKINRRAARDYPDLPLNAAIAKVTQATADQFHADVAA 125
Query: 114 LACLAPTHQPRATNHI------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
L CL P H+PRAT+ + M+ +I +I GHAYEA E++FD +S+ +YG S
Sbjct: 126 LGCLPPDHEPRATDFVTGRSDGHDMVSMIATLIEKGHAYEAGGEVLFDVTSMADYGQLSN 185
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW-------------GRGRPG 214
RK+DEQ+ G R+ + HK+NP DF+LWK S+ EPGWE+PW +GRPG
Sbjct: 186 RKLDEQRAGARIAVEGHKRNPGDFVLWKLSSEGEPGWEAPWGREAWEASGRTGMPKGRPG 245
Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
WHIECSAMS YLG+ FDIHGGGLDLIFPHHENEIAQS CA A +W+HNG+L LE
Sbjct: 246 WHIECSAMSEAYLGQTFDIHGGGLDLIFPHHENEIAQSRCAHGTAAMAQVWMHNGYLQLE 305
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
GRKMSKS+GNF+TI++LL T +FG RSW V+RLAMLMT YREPIDF+V+RL EAE L
Sbjct: 306 GRKMSKSDGNFVTIHDLLHTDRFGRRSWAGAVLRLAMLMTQYREPIDFSVKRLEEAEEAL 365
Query: 335 SKWPQTSTSKG--IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
+ W + L+AL +DL + +AI LH L + AS ++
Sbjct: 366 AGWARAVADVAPSAPSERFLAALSDDLASAAAIAELHALRK------GDPAALRASLDLI 419
Query: 393 GIEVC------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
GI+V + + AI + ERL LL+ K F+ AD IR +L ++G L+D K
Sbjct: 420 GIDVAGYLAATSDLAAPVPADAIAARIAERLDLLRGKNFAEADRIRDELLAEGIQLKDGK 479
Query: 447 NPDNGQRMTRWKQK 460
+PD G+R+T W+ K
Sbjct: 480 DPDTGERITTWEMK 493
>gi|320354379|ref|YP_004195718.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320122881|gb|ADW18427.1| cysteinyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 487
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 177/508 (34%), Positives = 249/508 (49%), Gaps = 72/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R+ Q ++ ++++YVCG T YD+ HIG+AR +VFD++ R LR+
Sbjct: 1 MSIRIYNTLSRRKEILQPLEEGHVKLYVCGITSYDYCHIGHARSALVFDMVVRYLRHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+VRN TDIDDKII RA ++ + + + +F D L L P +
Sbjct: 61 --KVTFVRNFTDIDDKIINRANEQGIDS------ASLALRFINEFYTDMDALGTLRPDLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HIP+MI LI+++I G AY A+ ++ F YG S R + + + G RV
Sbjct: 113 PKATEHIPEMIGLIEDLIDKGMAYPADGDVYFRVERFVGYGQLSGRGLADMQAGARVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W SPWG GRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 173 DKKEHPMDFVLWKAAKPGEPKWPSPWGEGRPGWHIECSAMSRKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSC A + AN+W+H+GF+ ++ KMSKS GNF+TI ++L + +
Sbjct: 233 PHHENEIAQSCGASG-KPFANLWMHHGFVTIKEEKMSKSLGNFLTIRDVL-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
V+RL + T YR P+DFT L +A L + + +
Sbjct: 285 EPEVLRLFIFSTQYRNPLDFTETALHDARAGLERMYECLAQVEDLPAEGTEGASVITDKD 344
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTK----------------NHDLLPI 384
A+ ND NT A+ L + K
Sbjct: 345 RTALASLVDRFHQAMDNDFNTAQALAHLFDTVKLLNKVLRTLPERPAAADLNLLRTTAAE 404
Query: 385 FNASAHILGIEVCKEHLN------------KNISIAIEKLVQERLILLKMKKFSSADYIR 432
F A +LG+ I L+ +R K +S++D +R
Sbjct: 405 FRELAGVLGLVQRNPAEVVAGNRAKILAGIDLDEETINGLITKRNQARAAKDWSTSDEVR 464
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
L +L+D T W+ K
Sbjct: 465 DYLLEHRIVLKDS------PEGTTWEVK 486
>gi|311029027|ref|ZP_07707117.1| cysteinyl-tRNA synthetase [Bacillus sp. m3-13]
Length = 466
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 166/489 (33%), Positives = 253/489 (51%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R+ +F ++ ++MYVCGPTVY++ HIGNARP IVFD + R L Y
Sbjct: 1 MTIHLYNTLTRQKEKFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVFDTVRRYLEYRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV N TD+DDK+I+ A++ +P I + + +D + L C T
Sbjct: 61 E--VNYVSNFTDVDDKLIKAAKELGEDVPT------IAERFIAAYHEDVSALGCKQATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I+ +I G+AYE++ ++ + T YG S + I++ ++GTR+
Sbjct: 113 PRVTESMDIIIEFIEALIEKGYAYESDGDVYYRTREFKEYGKLSHQPIEDLQLGTRIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF+LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 DKKQDALDFVLWKAAKEGEIHWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KKH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
++R ML HYR PI++ + L L + +
Sbjct: 285 DPQLLRFFMLSVHYRHPINYNEELLQSTNNGLERIRTAYANLKHRLDNTVDLATDDTEWV 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
+ + +D NT +AI L +A+++ + + F
Sbjct: 345 QKVEEFKNEFIKVMDDDFNTANAISVLFDMAKQANLYLNGKNTSEKVLKAFIAQFEELFS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++G+ + E + I L+Q+R+ K + F+ AD IR +L++K ILED
Sbjct: 405 VIGVSLTAEEELLDEEIE--SLIQQRIDARKNRDFARADEIRDELKAKNIILEDT----- 457
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 458 -AQGTRWKR 465
>gi|325567615|ref|ZP_08144282.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
gi|325159048|gb|EGC71194.1| cysteine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
Length = 470
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 169/494 (34%), Positives = 246/494 (49%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ FQ ++ ++MYVCGPTVY++ HIGN R + FD + R Y
Sbjct: 1 MIKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII A++ + P + + F +DT L T P
Sbjct: 60 -TVDYLMNFTDVDDKIIRAAKELGTTAP------EVAERFINAFNEDTAALNVKPATMNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +HI +I I ++ G+AY N ++ + T +YG S + IDE ++G
Sbjct: 113 RVMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K DF LWK + E WESPWG GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + AN W+HNG++ + + KMSKS GNF+T++E++
Sbjct: 233 TFPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
+ V+R + T YR PI ++ L EA+ L K T +
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344
Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+ + + +D N + I +++LA+ + L F+
Sbjct: 345 EVNAPVLEEFEERFIKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLTAGLAKFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L+ ER+ K K F+ +D IR +L+ +G ILED
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|312869734|ref|ZP_07729881.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
gi|311094783|gb|EFQ53080.1| cysteine--tRNA ligase [Lactobacillus oris PB013-T2-3]
Length = 471
Score = 385 bits (989), Expect = e-105, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 255/493 (51%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L + +
Sbjct: 1 MLKIYNTLTRQKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K Q F+ DTT + T P
Sbjct: 61 --VNYVSNFTDVDDKMIKAAHEQGITVP------QLADKFIQAFMADTTAVNIEPATKHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +IP +I +Q +I G+AYE++ ++ + +YG S + ID+ ++G
Sbjct: 113 RATENIPDIIAFVQTLIEKGYAYESDGDVYYRARKFAHYGQLSGQSIDDLEVGASEHVSA 172
Query: 184 HK----KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ ++P DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLG+ DIH GG D
Sbjct: 173 DEIGKKEDPMDFALWKAAKPGEISWDSPWGQGRPGWHIECSVMSTKYLGQTLDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS A + W+HNGF+ + + KMSKS NFIT+++++
Sbjct: 233 LEFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------- 341
++ V+R M T YR PI ++ LT+A+ L
Sbjct: 287 --KTVDPQVLRFFMATTQYRRPIQYSEDNLTDAKNNLEHIQTAYDNLTYRQQDAATGDDA 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
+A+ +D+N + I +++L + + +
Sbjct: 345 LVTQQLADFTARFTTAMDDDINVQNGIAVVYELVKAANTYAQQAAVKQGALQAYKDKLAQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI++ H N I+ L++ER K K F+ +D IR +L+ +G ILED
Sbjct: 405 LISIFGIKLVA-HDNHIDDEQIKALIEERNQARKNKDFARSDQIRDELKQQGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 462 ----PQGTRYKKE 470
>gi|228477775|ref|ZP_04062403.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250467|gb|EEK09681.1| cysteinyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 447
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 241/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEAGIST------KELSDKFIAAFMEDTGQLGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + ++ G AY + ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIITFVSTLVDKGFAYVSEGDVYFRVAKSNNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETERKENPLDFALWKAAKEGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
V+R + YR+PI+FT + + +AE+ L T + A
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEQVNQAELQTYLDA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQEAMDDDFNTANGVTVLFDMAKWINSGNYDQTVKDAFEKMLQVFGIVFEEE----VLDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D K R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRWTR 446
>gi|57233567|ref|YP_180814.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
gi|109894896|sp|Q3ZAD5|SYC_DEHE1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|57224015|gb|AAW39072.1| cysteinyl-tRNA synthetase [Dehalococcoides ethenogenes 195]
Length = 458
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 173/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ EF ++ ++MYVCG T HIG+A I FDV+ R L Y
Sbjct: 1 MKIYNTLSGKLEEFVPLEDGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLSYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDIDDKII +A + S + +N F+ L + PR
Sbjct: 59 RVKYIQNFTDIDDKIIAKANAQGIE------PSTLAERNIGVFLDAMAALNITPADYYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +P++I ++ +I G+AYEA + + YG S R +++ G R+
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYEAGGSVYLRVQKVEGYGKLSHRTLEQMMAGARIEPGEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C ++ W+HNG L L KMSKS GN +TI E L + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------IDPAVL 352
+R+ +L + YR P+ ++ + L AE + QT+ +
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARQDNPRLQEINVDVKTYRERFT 345
Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEV--CKEHLNK 403
+ ND NT +A+ + L RE K+ +F A ILG+ + + +
Sbjct: 346 QYMDNDFNTSAALATIFDLGRELNRIEAEGGKSTQGQELFKELAGILGLSLIIAEPTTSA 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + I+ L++ R L K++ AD IR L++ G +LED T WK K
Sbjct: 406 DAAPFIDMLIELRKDLRLAKQYQLADKIRTSLDAAGILLEDS------AGGTIWKIK 456
>gi|225867828|ref|YP_002743776.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
gi|225701104|emb|CAW97948.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
Length = 447
Score = 385 bits (988), Expect = e-105, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A++ S + + F++DT L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAAKEAGLS------PKQLADQFIAAFMEDTKALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I I +I G+AYE+ ++ F + NY + + I + + G
Sbjct: 113 RVMDYMDEIIVFIAALIKKGYAYESAGDVYFRVAKAANYAKLANKTIADLEAGASGRTDT 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W SPW GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEIAWASPWSSGRPGWHIECSVMATELLGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T+++LL +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KSFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ +R + HYR+PI+FT + + +A + L T A
Sbjct: 285 TVDGQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLNAFITA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ +D NT + I L +A+ + + F + GI E +
Sbjct: 345 FKAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAES----LDT 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L+ ER + F+ AD IR QL ++G L D K+ R
Sbjct: 401 EIEQLIAERQEARANRDFAKADAIRDQLAAQGIKLLDTKDGVRWIR 446
>gi|306830478|ref|ZP_07463648.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304427503|gb|EFM30605.1| cysteine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 448
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 159/467 (34%), Positives = 241/467 (51%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + +F I + + MYVCGPTVY++ HIGNAR ++ FD + R Y
Sbjct: 1 MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A + + K F++D +L T
Sbjct: 61 --KVNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKQLGVKPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +++ ++I ++ ++ G AYEAN ++ F + NY + + + + ++G
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W+SPWG GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ V+R + YR+P++FT + + +A + L T T
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ +D NT + I + +A+ N + F + GI +E +
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEE----VLD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR QL ++G L D K+ R
Sbjct: 401 ADIEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKDGVRWTR 447
>gi|297587609|ref|ZP_06946253.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
gi|297574298|gb|EFH93018.1| cysteine--tRNA ligase [Finegoldia magna ATCC 53516]
Length = 462
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 173/478 (36%), Positives = 243/478 (50%), Gaps = 47/478 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ I N+ +YVCGPTVY++ H+GNARP++VFD L R Y
Sbjct: 1 MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRYFIYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQP 123
V +V N TDIDDKII +A+ E IT K Q ++ + + L P
Sbjct: 59 NVKFVSNFTDIDDKIINKAKDEDID------FREITKKYIQAYLDNVSGLNFDEEDTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT +I +MI ++ + G AY + + FD + +YG S++ ID+ + G R+
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172
Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK+ EP WESPWG GRPGWH+ECS MS LG DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS AN W+HN + ++ KMSKS NF + ++ + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
VIRL +L HYR PIDF+ L + L + I
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLERLYTAKKFLNRILENSSEKEGSDDNIQ 344
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIE 395
A+ +D+NT AI L + KN+D + + +++LGI
Sbjct: 345 SFREKFEQAMDDDINTSDAISVLFDFIKYINKNYDENTSKNILTEAKKLMDDISYVLGIL 404
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+E + ++ IE L+++R K K F AD IR +L S G +L+D ++ +R
Sbjct: 405 FKEE--DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460
>gi|329925602|ref|ZP_08280443.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939731|gb|EGG36073.1| cysteine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 468
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 169/492 (34%), Positives = 250/492 (50%), Gaps = 58/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R F A +P +++YVCGPTVYD+ HIGNARPMI FDV+
Sbjct: 1 MALQIYNTLTRMKETFVAQEPGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I +A Q ++P + K + +D L T
Sbjct: 61 D--VNYVVNFTDVDDKMIRKAEQTGTTVP------EVAEKFINAYYEDLDGLGIPRATLN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+++ +I IQ +I AYE ++ + T +YG S++ +DE + G R+
Sbjct: 113 PRVTDNMESIIEFIQELIDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK + P E W SPWG GRPGWHIECSAM+ YLG DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS + AN W+HNG++ + KMSKS GN + + EL E +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+R ML THYR P++++ + + +A+ + + + +
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMEQAQNSVERLANAAANVEHRLGTAIGSKDDQVSQD 344
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
+ + +D NT AI A+ + A E+ + H++L FN
Sbjct: 345 VADKISAVLVEFHEKMQDDFNTPDAITAMFQWASEANQLLKEASIPAANLHEVLRAFNEM 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+L + ++ + IE L+ ER+ K K ++ AD IR +L +G +LED
Sbjct: 405 NSVL--RIVNTGTDELLDEEIEALIAERVEARKNKNWARADEIRDKLADEGIVLEDT--- 459
Query: 449 DNGQRMTRWKQK 460
+ RW++K
Sbjct: 460 ---AQGMRWRRK 468
>gi|307274057|ref|ZP_07555267.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|306509365|gb|EFM78425.1| cysteinyl-tRNA synthetase [Enterococcus faecalis TX0855]
Length = 478
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 168/490 (34%), Positives = 247/490 (50%), Gaps = 56/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ F I+ +RMYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 9 MIKIYNTLTREKEVFTPIEAHKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 68
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A++ + P + + + F +DT L T P
Sbjct: 69 --VNYVSNFTDVDDKIIKAAKELKITAP------EVAERFIKAFEEDTQALNVQPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +H+P ++ I +I G AYE ++ + T PNYG S + IDE +
Sbjct: 121 RVMDHMPDILAFIDVLIEKGFAYEVAGDVYYRTRKFPNYGKLSHQSIDELEVGASQRTGV 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ K++P DF LWK + E W+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 181 EQQLKEDPLDFALWKSAKEDEISWDSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS AN W+HNG++ + + KMSKS GNFIT++E++
Sbjct: 241 EFPHHENEIAQSEAKTG-HTFANYWMHNGYVTIGEDDEKMSKSLGNFITVHEMI------ 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
+ ++R M T YR PI ++ L EA K
Sbjct: 294 -QKVDPQILRFFMSTTQYRRPIRYSESTLKEAAANYQKLKNAFENLRFRQADAVASLPED 352
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHI-- 391
++ ++ + +D N + I +++LA+ + + P+ A +
Sbjct: 353 EHYLAQLNELEQRFITEMDDDFNAANGITVVYELAKMMNQYSEQATVSEPVLVAMDKLFS 412
Query: 392 --LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
L I + + ++ L++ER K + F+ +D IR L+ +G +LED
Sbjct: 413 GWLAIFCLFFKNEELVDAQVDALIEERNQARKDRDFARSDEIRDLLKEQGIVLEDT---- 468
Query: 450 NGQRMTRWKQ 459
+ TRW++
Sbjct: 469 --PQGTRWRR 476
>gi|73748013|ref|YP_307252.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
gi|109894897|sp|Q3ZWG4|SYC_DEHSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|73659729|emb|CAI82336.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. CBDB1]
Length = 457
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 174/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ +F ++ ++MYVCG T HIG+A I FDV+ R L Y
Sbjct: 1 MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDIDDKII +A + S + +N F+ L + PR
Sbjct: 59 RVKYIQNFTDIDDKIIAKANAQGIE------PSTLAERNIGVFLDAMAALNITPADYYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +P++I ++ +I G+AY + + YG S R +++ G RV
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C ++ W+HNG L L KMSKS GN +TI E L + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------IIDPAVL 352
+R+ +L + YR P+ ++ + L AE + QT+ K
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRERFT 345
Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEV--CKEHLNK 403
+ ND NT +A+ + L+RE K+ D +F A ILG+ + +
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ IE L++ R L K++ AD IR L++ G +LED T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456
>gi|229542225|ref|ZP_04431285.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
gi|229326645|gb|EEN92320.1| cysteinyl-tRNA synthetase [Bacillus coagulans 36D1]
Length = 465
Score = 385 bits (988), Expect = e-104, Method: Composition-based stats.
Identities = 169/486 (34%), Positives = 251/486 (51%), Gaps = 51/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL RK F ++ ++MYVCGPTVY++ HIGNARP IVFD + R L +
Sbjct: 1 MSIQIYNTLTRKKEPFIPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVRRYLAFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A++ +P ++ + + + +D L C
Sbjct: 61 D--VNYVSNFTDVDDKLIKAAKERGEEVP------ALSERFIKSYFEDIDALGCCHADAH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I I+ +I GHAYE+ ++ + T S P+YG S + IDE K G R+
Sbjct: 113 PRVTENMDAIIAFIEKLIEKGHAYESGGDVYYHTRSFPDYGKLSHQSIDELKSGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKEGEISWDSPWGKGRPGWHIECSAMAKKYLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GN + +++++E
Sbjct: 233 PHHENEIAQSEALTD-KPFARYWMHNGYINIDNEKMSKSLGNIVLVHDIIERH------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
V+R ML HYR PI+++ + L A+ L + + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYSEELLANAKAGLERIKTSYQNVKHRLESSANLAEDDEKWL 344
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILG 393
+ + A+ +D NT + I L +L++++ L I G
Sbjct: 345 EQVRSLHRQFIEAMDDDFNTANGISVLFELSKQANYYLRGKNTTETVLRAFMKEFETISG 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ K + IE L+++R K + F AD IR +L+S ILED +
Sbjct: 405 VLGLKLEEEVLLDEEIEALIEKRNEARKARNFQLADEIRDKLKSMNIILEDT------PQ 458
Query: 454 MTRWKQ 459
RW++
Sbjct: 459 GVRWRR 464
>gi|315274656|ref|ZP_07869496.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
gi|313615713|gb|EFR89001.1| cysteinyl-tRNA synthetase [Listeria marthii FSL S4-120]
Length = 471
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 252/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L T
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I +I +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQMINTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG+ DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGETIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|187631664|sp|A4W7I4|SYC_ENT38 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 461
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 171/492 (34%), Positives = 247/492 (50%), Gaps = 66/492 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVSRYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -TLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIHEIIEITEKLIERGHAYVASNGDVMFSVPTDPGYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKTSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS NF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLDNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYIAVRGTDKSVAPAGGEAFEARFID 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
+ +D NT A L +ARE + + L A +LG+
Sbjct: 345 VMNDDFNTPEAYSVLFDMAREINRLKVEDVSAANALASHLRKLAAVLGLLEQDPETFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLK---------MKKFSSADYIRKQLESKGFILEDYKNP 448
+ + IE L+ RL + R +L G +LED
Sbjct: 405 GAQNDGDEVAKIEALITARLEARQAKDWAAADAA---------RNRLTEMGIVLED---- 451
Query: 449 DNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 --GPQGTIWRRK 461
>gi|315612689|ref|ZP_07887601.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
gi|315315276|gb|EFU63316.1| cysteine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
Length = 447
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVADLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPDEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDTQELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N+ + I + ++A+ + + + GI +E +
Sbjct: 345 FVAAMDEDFNSANGITVVFEMAKWINSGNYDASVKQALADMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|297568576|ref|YP_003689920.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296924491|gb|ADH85301.1| cysteinyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 494
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 169/503 (33%), Positives = 260/503 (51%), Gaps = 69/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I+NT + + ++ +++MYVCG T YD+ HIG+AR ++VFD++YR L++
Sbjct: 1 MPILIHNTKTARKEKLAPLEEGHVKMYVCGITAYDYCHIGHARSVLVFDMIYRYLQHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+VRN TDIDDKII+RA+++ + + ++ + +F +D T L L PT +
Sbjct: 61 --RVTFVRNFTDIDDKIIKRAQEQGTT------CTELSQRFIAKFHEDMTALNTLPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+P+MI +I+ ++ AYEA ++ + YG S R +++ + G RV
Sbjct: 113 PLATEHLPEMIAMIEELVAKDLAYEAQGDVYYRVQRFAGYGVLSGRGLEDMQAGARVAVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S P EP W+SPWG GRPGWHIECSAM YLG+ FDIHGGG DL+F
Sbjct: 173 DNKEHPMDFVLWKASKPGEPAWDSPWGPGRPGWHIECSAMGKKYLGETFDIHGGGKDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN+W+H+GF+ ++ KMSKS GNF+TI E+LE
Sbjct: 233 PHHENEIAQSEGASG-KSFANLWVHHGFVTIKDEKMSKSLGNFLTIREVLERH------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
PA +RL + THYR P+D++ L +AE L++
Sbjct: 285 PAEALRLFVFSTHYRNPLDYSETALQDAEAALTRIYSALAATAQLPGAAGDPSPSASVVG 344
Query: 341 ---STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
++ + A+ D N+ A+ + + K L
Sbjct: 345 EKDRDKLAKLEQSFHQAMDIDFNSALALGRIFDAIKIINKVRQALPANPAPQDLQLLQQT 404
Query: 383 -PIFNASAHILGIEVCK-----EHLNKNI-------SIAIEKLVQERLILLKMKKFSSAD 429
+ G+ + E + + IE L+++R + K ++ AD
Sbjct: 405 AATIRDLTAVFGLAQEEPVSWLEKRQQRLLAQLSIKPAEIEALLEQREQARRDKDWAEAD 464
Query: 430 YIRKQLESKGFILEDYKNPDNGQ 452
IR QL + +++D + +
Sbjct: 465 RIRDQLLQQRIVIKDGPDGTKWE 487
>gi|326790451|ref|YP_004308272.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326541215|gb|ADZ83074.1| cysteinyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 472
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 178/487 (36%), Positives = 259/487 (53%), Gaps = 53/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL ++ EF+ I+P +RMYVCGPTVY+ HIGNARP IVFD + R E
Sbjct: 1 MIKIYNTLTKRKEEFKPIEPHKVRMYVCGPTVYNLIHIGNARPYIVFDTVRRYFESVGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TD+DDKII++A +E S + + ++ ++ +KD L TH P
Sbjct: 61 --VNYVQNFTDVDDKIIKKANEEGRST------NEVVTQYIEETLKDVNNLNVTPATHHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTRVPE 181
R T + ++I +I+ +I G+AYE N + FDT++ YG S++ ++E + RV
Sbjct: 113 RVTEEMDRIIEMIKELIEKGYAYEINGTVYFDTAAFEQYGKLSKKVLEELEAGRSERVAL 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKN DF+LWK EP WESPW GRPGWHIECSAM+ YLG DIH GG DL+
Sbjct: 173 TEEKKNHMDFVLWKPKKEGEPYWESPWSNGRPGWHIECSAMAKRYLGDTIDIHAGGEDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA+ E A+ W+HN FLN++ +KMSKS GNF T+ ++ G
Sbjct: 233 FPHHENEIAQSECANGKE-FAHYWMHNAFLNIDNKKMSKSLGNFKTLRDV-------GEM 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------- 341
+ V+R ML HYR P++F+ + + A+ L +
Sbjct: 285 YGYDVVRFFMLNAHYRSPLNFSAELIESAKNSLERIKNAKATLSFALEHSQIADLTEEEK 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNAS 388
+ +D NT AI + +L + + +L +FN
Sbjct: 345 ALLKELDDFKARFHEHMEDDFNTADAISIIFELVKFANTYAKEGASQPFVEAVLKLFNEL 404
Query: 389 AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
ILG+ ++ N++ I++ +++R K + F+ AD IR L+ +G ++ED +
Sbjct: 405 TDILGLIYDRKGNNEDGLSDEEIKEYIEKRTAAKKARDFAEADRIRDFLKDQGVLIEDTR 464
Query: 447 NPDNGQR 453
+R
Sbjct: 465 EGVRFKR 471
>gi|254411359|ref|ZP_05025136.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
gi|196181860|gb|EDX76847.1| cysteinyl-tRNA synthetase [Microcoleus chthonoplastes PCC 7420]
Length = 482
Score = 384 bits (987), Expect = e-104, Method: Composition-based stats.
Identities = 166/501 (33%), Positives = 240/501 (47%), Gaps = 64/501 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F I+ +RMY CG T YD+ H+G+AR I++D R L++
Sbjct: 1 MTLTLYNTLTRRKEPFSPIEAGKVRMYCCGITAYDYCHLGHARTCIIWDTARRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N TDIDDKI+ RARQE S + ++ + Q + +D RL
Sbjct: 61 D--VNYVQNFTDIDDKILNRARQEGTS------MEAVSERFIQAYFEDMARLNVDEADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LI ++ +AY A ++ + YG S RK+++ + G +
Sbjct: 113 PRATHCLDGIKRLIYDLEQKNYAYPAAGDVYYAVRRFGEYGKLSGRKLEDLQAGASGRVE 172
Query: 183 YHKKNPA------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
DF LWK S P EP WESPWG GRPGWHIECSAM LG DIH G
Sbjct: 173 VADAEAGKKKDAFDFALWKGSKPGEPAWESPWGAGRPGWHIECSAMIRDNLGDTVDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS + A W+H G + + G KMSKS GNFITI +LL+
Sbjct: 233 GSDLVFPHHENEIAQSEAVTG-QPLARYWLHTGMVIVNGEKMSKSLGNFITIRDLLDRAT 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQT 340
+RL +L YR+P+DFT + L A W +
Sbjct: 292 ------DPMAVRLFVLQAQYRKPLDFTDEALAAATNGWHTLKDGLLFGDQYGEQLGWQDS 345
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
+ + +A+ +D N + L +LA++ + ++L
Sbjct: 346 DKRQTAVLERFQAAVDDDFNFAEGLAVLFELAKDLGREGNILVHEGKTRTSPQELEAQWQ 405
Query: 384 IFNASAHILGIEVCKEHLNKN-----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
A + G+EV E +++ IE L+Q+R K K F +D IR +L+++
Sbjct: 406 TLVELAQVFGLEVQGEEISQESTSGLSDAEIEALIQQRSSARKRKDFEMSDRIRDELKAQ 465
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G L D +TRW +
Sbjct: 466 GITLIDQSGG-----VTRWHR 481
>gi|304405640|ref|ZP_07387299.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
gi|304345679|gb|EFM11514.1| cysteinyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
Length = 477
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 170/499 (34%), Positives = 241/499 (48%), Gaps = 63/499 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNT+ R F+ P ++MYVCGPTVYD+ HIGNARP+I FDV+ R L
Sbjct: 1 MTVSIYNTMTRAQEAFKPQQPGQVKMYVCGPTVYDYIHIGNARPVIFFDVVRRYLEVTGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y+ N TD+DDK+I +A Q ++P + F +D L T
Sbjct: 61 E--VNYIVNFTDVDDKLIRKAEQLGTTVP------EVADTFIAAFNEDIEALGVHKATRN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HIP ++ IQ ++ G AYE+ ++ F T+ YG S + +E ++G R+
Sbjct: 113 PRVTDHIPLIVSFIQGLVDKGIAYESAGDVYFRTNQFEAYGKLSHQNTEELQLGIRIEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF+LWK + P E W SPWG GRPGWHIECSAM+ YLG DIHGGG DL F
Sbjct: 173 ERKQHAQDFVLWKSAKPGEIHWSSPWGNGRPGWHIECSAMAREYLGDTLDIHGGGHDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS + AN W+HNG++++ KMSKS GN IT+ ELL +
Sbjct: 233 PHHECEVAQSESLTG-KPLANYWMHNGYVHINNEKMSKSLGNGITVRELL-------KRT 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------------- 337
IR +L THYR P++F+ + +AE + +
Sbjct: 285 KPQAIRYFVLATHYRSPLNFSDDTIAQAENSVERIVNCAGNLLHRLSVLGEKPLEPQQAV 344
Query: 338 -----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--------- 383
I + + +D NT AI AL L E+
Sbjct: 345 AASGNDALDARLAAIAGQFAAKMNDDFNTPDAITALFDLVSEANGAMQRQDASAAELQAL 404
Query: 384 --IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ LG+ + + + IEKL+ ER + K ++ AD IR L + +
Sbjct: 405 LALLEQFDRTLGLLPRADEAGELLDEQIEKLIVERTEARQAKNWARADEIRDLLAADNIV 464
Query: 442 LEDYKNPDNGQRMTRWKQK 460
LED + +W++K
Sbjct: 465 LEDT------PQGIKWRRK 477
>gi|116749069|ref|YP_845756.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|171460796|sp|A0LIR9|SYC_SYNFM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116698133|gb|ABK17321.1| cysteinyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 493
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 187/514 (36%), Positives = 252/514 (49%), Gaps = 79/514 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL + EF ++P ++ YVCG TVYD +HIG+AR IVFDV+YR LR+
Sbjct: 1 MVLHVYNTLTKSKEEFIPLEPGKVKFYVCGVTVYDLSHIGHARSAIVFDVIYRYLRFLGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA I + F +D L L P +
Sbjct: 61 E--VTYVRNFTDVDDKIIRRANDAGTD------CRSIAQRYIAAFYEDMDALGVLRPDLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT ++P MI +I+ ++ G AY+A ++ F+ P YG S R+I++ G RV
Sbjct: 113 PLATENVPGMIEIIRVLMDKGIAYQAGADVFFEIEKFPGYGKLSGRQIEDMLAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W+SPWG GRPGWHIECSAM S +LGK FDIHGGG DLIF
Sbjct: 173 ARKRNPLDFVLWKGSKPGEPSWDSPWGPGRPGWHIECSAMGSRFLGKTFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+N+ KMSKS GNF+TI ++L +
Sbjct: 233 PHHENEIAQSEAAFGM-PFVRYWLHNGFVNINNEKMSKSLGNFLTIRDVL-------QKV 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------------- 340
+R +L HYR P+DF+ + + EAE L + T
Sbjct: 285 HPETVRFFVLSKHYRSPVDFSDETIGEAEKGLERLYGTLGAVKERAAAGVEEAFQEKALR 344
Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------- 381
+ A A+ ND NT A+ L L R + D
Sbjct: 345 GQDPELFDQIAALSGAFREAMDNDFNTAQALGNLFSLQRHLQRFLDKFGRKQLKGPASAL 404
Query: 382 ----LPIFNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKF 425
A +LG+ + +E+ ++ R + K F
Sbjct: 405 ARAGADAIRDHALVLGLLTREPEAFQAEQRSLKIKSTGLTEAEVERCIELRRQARQDKNF 464
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ AD +R+++E KG LED TRW+
Sbjct: 465 AEADRLREEIEKKGIQLEDS------PAGTRWRV 492
>gi|332970727|gb|EGK09707.1| cysteine--tRNA ligase [Desmospora sp. 8437]
Length = 462
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 248/485 (51%), Gaps = 56/485 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
+NT RK+ F+ + MYVCGPTVY++ HIGNAR + FDV+ R LRY + VT
Sbjct: 2 FNTQTRKLEPFRPQHDRKVAMYVCGPTVYNYIHIGNARVFVFFDVVRRYLRYKGYD--VT 59
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YV+N TD+DD++IE A++E N + + + + + D L P+AT
Sbjct: 60 YVQNFTDVDDRLIESAKRE------NTTVKELAERYIRAYFDDMDALGVQRADVHPKATE 113
Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
HIP+M I +I G+AYE ++ + +YG S + ++E G RV K+
Sbjct: 114 HIPEMQEAILTLIDKGYAYEREGDVYYRALRKEDYGKLSGQSVEELNAGARVEVNEKKET 173
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF LWK++ P E WESPWGRGRPGWHIECSAMS YLG D+H GG+DL FPHHEN
Sbjct: 174 PLDFALWKKAKPGEISWESPWGRGRPGWHIECSAMSRKYLGDTLDVHAGGMDLCFPHHEN 233
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQS + W+HNG++N+ KMSKS GN + ++EL E + +
Sbjct: 234 EIAQSEAWT-EKPFVRYWLHNGYINMGNEKMSKSLGNVVRVHELRE-------QYAPRAL 285
Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA---- 354
R +L HYR PI F+ + + + E L ++ T +G +P V
Sbjct: 286 RYFLLSAHYRNPISFSHEAIRQIEGSLERFDTAVTNLHHRMGAAQEGEAEPEVRERLASL 345
Query: 355 -------LYNDLNTVSAIQALHKLARESTK--------NHDLLPIF----NASAHILGIE 395
+ +DLNT + I LH+ + + + L + ILG+
Sbjct: 346 TGEFEAAMDDDLNTANGISVLHEAVKFANETVARSVVPKGSLAMLLDWIHRFGGEILGLV 405
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
E +++ IE L++ER + F AD IR +L ++G ILED +
Sbjct: 406 TAGEE--DSLAGEIEALIEERQQARAARDFKRADAIRDRLAAQGIILEDT------PQGV 457
Query: 456 RWKQK 460
RW++K
Sbjct: 458 RWRRK 462
>gi|289432010|ref|YP_003461883.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
gi|288945730|gb|ADC73427.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. GT]
Length = 485
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 174/477 (36%), Positives = 241/477 (50%), Gaps = 42/477 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ +F ++ ++MYVCG T HIG+A I FDV+ R L Y
Sbjct: 1 MKIYNTLSGKLEKFVPLENGKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDIDDKII +A + S + +N F+ L + PR
Sbjct: 59 RVKYIQNFTDIDDKIIAKANAQGIE------PSTLAERNIGVFLDAMAALNITPADYYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +P++I ++ +I G+AY + + YG S R +++ G RV
Sbjct: 113 ATQEVPKIIEMVSGLIEKGYAYAVGGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C ++ W+HNG L L KMSKS GN +TI E L + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------IIDPAVL 352
+R+ +L + YR P+ ++ + L AE + QT+ K
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETAVDTKAYRERFT 345
Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEV--CKEHLNK 403
+ ND NT +A+ + L+RE K+ D +F A ILG+ + +
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ IE L++ R L K++ AD IR L++ G +LED T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456
>gi|109894929|sp|Q21YS0|SYC_RHOFD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 459
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 173/472 (36%), Positives = 244/472 (51%), Gaps = 38/472 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R I + P ++RMYVCG TVYD H+G+AR M+ FDV+ R L+
Sbjct: 1 MSLRIYNTLSRAIEPLIPLQPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKVSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRN+TDIDDKII+RA + ++I +T + +D L PTH+
Sbjct: 60 -LRVTYVRNVTDIDDKIIKRALENG------ESIRALTERMVDALHQDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +PQM+ LI + G AY+A N ++ + P YG S + +DE + G RV
Sbjct: 113 PRATEFVPQMLSLIGRLEQKGLAYQAVNGDVNYAVRKFPGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + P EP W+S +G+GRPGWHIECSAM LG+ DIHGGG
Sbjct: 173 ADGKDDPLDFVLWKTAKPNEPLDAKWDSVYGQGRPGWHIECSAMCGQMLGETVDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A+IW+HNGF+ + KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLASIWMHNGFVTRDNEKMSKSLGNFFTIRDILAR---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII 347
+ A R ++ HYR ++ + L +A L + +
Sbjct: 288 ---YDAETTRFFIIRAHYRSALNHSDAHLDDARNSLKRLYTALDLVAPEPLLEIDWRQPF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
+A+ D T A+ + +LA E K D L + A LG+ +
Sbjct: 345 AARFKAAMDEDFGTPEAVAVMFELATEVNKTRDPKLAGLLKALGACLGLLQGDPKVFLQA 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +I L+ +R K F+ AD IR+ L ++G +L+D +
Sbjct: 405 GATLDAASIAALIAQRTAAKAAKNFAEADRIRQDLLARGIVLKDSAAGTVWE 456
>gi|46906472|ref|YP_012861.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47094540|ref|ZP_00232204.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|47097639|ref|ZP_00235159.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|217965673|ref|YP_002351351.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|226222868|ref|YP_002756975.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Clip81459]
gi|254825717|ref|ZP_05230718.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|254853494|ref|ZP_05242842.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|254900580|ref|ZP_05260504.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|254913469|ref|ZP_05263481.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|254932458|ref|ZP_05265817.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|254937950|ref|ZP_05269647.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|254991761|ref|ZP_05273951.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
gi|255520317|ref|ZP_05387554.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
gi|290892620|ref|ZP_06555613.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|300764636|ref|ZP_07074628.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
gi|61216246|sp|Q724H3|SYC_LISMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781684|sp|B8DF15|SYC_LISMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|259511837|sp|C1KYH2|SYC_LISMC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|46879736|gb|AAT03038.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|47013983|gb|EAL04996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|47017086|gb|EAL07955.1| cysteinyl-tRNA synthetase [Listeria monocytogenes str. 4b H7858]
gi|217334943|gb|ACK40737.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|225875330|emb|CAS04027.1| cysteinyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
gi|258606866|gb|EEW19474.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|258610559|gb|EEW23167.1| cysteinyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|290557929|gb|EFD91450.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|293584014|gb|EFF96046.1| cysteinyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|293591477|gb|EFF99811.1| cysteinyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|293594961|gb|EFG02722.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|300514743|gb|EFK41798.1| hypothetical protein LMHG_11118 [Listeria monocytogenes FSL N1-017]
gi|307569778|emb|CAR82957.1| cysS [Listeria monocytogenes L99]
gi|328467850|gb|EGF38890.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 1816]
gi|332310650|gb|EGJ23745.1| Cysteinyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
Length = 471
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 171/487 (35%), Positives = 251/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L T
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|169335260|ref|ZP_02862453.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
gi|169257998|gb|EDS71964.1| hypothetical protein ANASTE_01668 [Anaerofustis stercorihominis DSM
17244]
Length = 468
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 172/483 (35%), Positives = 255/483 (52%), Gaps = 51/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF I+ + MYVCGPTVY+F HIGNARP I+FD L R L Y
Sbjct: 1 MKLYNTLTRKKEEFVPINEGEVNMYVCGPTVYNFFHIGNARPFIIFDTLRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDKII +A++EH + + K +++ D L T PR
Sbjct: 59 KVNYVQNFTDIDDKIINKAKEEHTTS------KAVADKYIKEYFTDAKGLGIKEATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ I +I LI ++ +G+AY + + + S +YG S++ IDE G RV
Sbjct: 113 VSECIGDIIDLISDLEKNGYAYNVDGNVYYRVSKFKDYGKLSKKPIDELISGARVEVNDE 172
Query: 185 KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK+ E ++SPWG+GRPGWHIECSAMS YLG DIHGGG DLIFP
Sbjct: 173 KESPLDFALWKKQKEDSEIAFDSPWGKGRPGWHIECSAMSRKYLGSTIDIHGGGEDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A+ + + ++HNG++N+ KMSKS GNF + ++ + +
Sbjct: 233 HHENEIAQSEGANG-KDFVHYFVHNGYININNEKMSKSKGNFFMVRDI-------SKDFD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
V+RL ML HY+ P++F+ L + + L++ T +
Sbjct: 285 LEVVRLFMLSAHYKTPVNFSFDILKQTQSGLNRLYNTKENLLYLLDKAKDKDLKEDEKEF 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAH 390
+A+ +D+NT +A+ ++ L+++ N + ++
Sbjct: 345 INSLPKYREEFKNAMEDDINTANAVSTIYDLSKDINSNVNENSSKEMIMKSYEMYMELNG 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ KE ++ + I +L+++R K K F+ AD IR L KG +LED +
Sbjct: 405 VLGLLT-KEKEDEILEDEIIELIEKRQNARKNKDFALADKIRDDLLDKGIVLEDTREGVK 463
Query: 451 GQR 453
+
Sbjct: 464 WHK 466
>gi|156742112|ref|YP_001432241.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|156233440|gb|ABU58223.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 478
Score = 384 bits (986), Expect = e-104, Method: Composition-based stats.
Identities = 183/498 (36%), Positives = 252/498 (50%), Gaps = 61/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL R + F+ ++P ++MYVCG TVYD AHIG+A IVFDV+ R L Y
Sbjct: 1 MSIRIYNTLTRTLEPFETLEPGVVKMYVCGVTVYDRAHIGHAMSAIVFDVVRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+DDKII RA + + +F++D L
Sbjct: 61 --AVQHVVNFTDVDDKIINRA------HALGRDPKELAESYIAEFLEDLEALNVKRAHIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +P++ I +I GHAY + ++ F S+ P+YG SRR +D+ G R+
Sbjct: 113 PRATETMPEIQRFISRLIETGHAYVVDGDVYFRVSTAPDYGKLSRRSLDDMIAGNRIGID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAM+ +LG+ DIHGGG DLIF
Sbjct: 173 ERKENPADFALWKAAKPGEPFWDSPWGPGRPGWHIECSAMNLAHLGEQIDIHGGGTDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR---------KMSKSNGNFITINELLE 293
PHHENEIAQ+ + A W+HNG L ++ R KMSKS GN +TI E L
Sbjct: 233 PHHENEIAQTESLTG-KTFARYWMHNGMLQIQTRLADGTYKLEKMSKSLGNVVTIREFLA 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-STSKGIID---- 348
+ V+RL +L + YR P+ F + + E L++ G I+
Sbjct: 292 R-------YHPDVLRLTVLSSSYRSPLAFGEEIAADQERKLARLRSALEPPIGTIEAGPA 344
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
++A+ +D NT A+ AL L R D F
Sbjct: 345 VEVLLAAVRTARERFIAAMDDDFNTAGALAALFDLVRSINTARDAGVGGAPFAEAQATFR 404
Query: 387 ASAHILGIEVCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LG+ + + + + I+ LV+ R L K K+F+ AD +R +L G +LED
Sbjct: 405 ELVDVLGLTLIAPRPVTQQAAPFIDLLVEVRSELRKAKQFALADMVRDRLAQLGVMLEDT 464
Query: 446 KNPDNGQRMTRWKQ--KP 461
+ TRWK KP
Sbjct: 465 ------PQGTRWKVTDKP 476
>gi|306832715|ref|ZP_07465852.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
gi|304425171|gb|EFM28300.1| cysteine--tRNA ligase [Streptococcus bovis ATCC 700338]
Length = 448
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 159/467 (34%), Positives = 241/467 (51%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + +F I + + MYVCGPTVY++ HIGNAR ++ FD + R Y
Sbjct: 1 MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A + + K F++D +L T
Sbjct: 61 --KVNYISNFTDVDDKIIKGAAEVGMDT------KAFSDKFIAAFMEDVKQLGVKPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +++ ++I ++ ++ G AYEAN ++ F + NY + + + + ++G
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W+SPWG GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAKPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ V+R + YR+P++FT + + +A + L T T
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ +D NT + I + +A+ N + F + GI +E +
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEE----VLD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR QL ++G L D K+ R
Sbjct: 401 ADIEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKDGVRWTR 447
>gi|259502662|ref|ZP_05745564.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
gi|259169307|gb|EEW53802.1| cysteine-tRNA ligase [Lactobacillus antri DSM 16041]
Length = 471
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 255/493 (51%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L + +
Sbjct: 1 MLTIYNTLTRRKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K + F++DTT + T P
Sbjct: 61 --VNYVSNFTDVDDKMIKAAHEQGITVP------QLADKFIRAFMEDTTAVNIEPATKHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +IP++I +Q +I +G+AYE++ ++ + NYG S + ID+ ++G
Sbjct: 113 RATENIPEIIAFVQRLIKNGYAYESDGDVYYRARKFANYGQLSGQSIDDLEVGASEHVSA 172
Query: 184 HK----KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ ++P DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLG+ DIH GG D
Sbjct: 173 DEIGKKEDPMDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGQTLDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS A + W+HNGF+ + + KMSKS NFIT+++++
Sbjct: 233 LEFPHHENEIAQSEAATG-QPFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------- 341
++ V+R M T YR PI ++ LT+A+ L
Sbjct: 287 --KTVDPQVLRFFMATTQYRRPIQYSEDNLTDAQNNLEHIRTAYDNLTYREQDAEVGVDE 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
+ + +D+N + I +++L + +
Sbjct: 345 VVSQQLADFTARFTAVMDDDINVQNGIAVVYELVKAANTYAQQPVVKQGALQAYKDKLAQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI++ N+ I+ L++ER K K F+ +D IR +L+ +G ILED
Sbjct: 405 LVSIFGIKLVA-RDNQIDDEQIKALIEERNQARKNKDFARSDQIRDELKQRGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 462 ----PQGTRYKKE 470
>gi|225871262|ref|YP_002747209.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
gi|225700666|emb|CAW95246.1| cysteinyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
Length = 447
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 163/467 (34%), Positives = 234/467 (50%), Gaps = 36/467 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLREFVPITDKVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A++ S + + F++DT L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAAKESGVS------PKELADRFIAAFMEDTKALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I I +I G+AYE+ +I F + NY + + I + + G
Sbjct: 113 RVMDYMDEIIAFIAALIKKGYAYESAGDIYFRVAKASNYARLANKTIADLEAGASGRTDT 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + E W SPW GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKEDPLDFALWKSAKLGEISWASPWSAGRPGWHIECSVMATELLGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS A + AN W+HNGF+N++ KMSKS GNF+T+++LL +
Sbjct: 233 EFPHHTNEIAQSE-AKTSKTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ +R + HYR+PI+FT + + +A + L T A
Sbjct: 285 TVDGQTLRFFLATQHYRKPINFTEKAIHDAGVNLKYLKNTLQQPTVATADASQLAAFITA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ +D NT + I L +A+ + + F + GI E +
Sbjct: 345 FKAAMNDDFNTANGITVLFDMAKWINSGAYSEAVKSAFEEMLAVFGIVFEAES----LDT 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
IE+L+ ER + F+ AD IR QL ++G L D K R
Sbjct: 401 EIEQLIAERQEARANRDFARADAIRDQLAAQGIKLLDTKEGVRWIRG 447
>gi|289168428|ref|YP_003446697.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
gi|288907995|emb|CBJ22835.1| cysteinyl-tRNA synthetase [Streptococcus mitis B6]
Length = 447
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++ +I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEELIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKLGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFSGTVDAQELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + + GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|187924487|ref|YP_001896129.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187715681|gb|ACD16905.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 465
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 173/486 (35%), Positives = 255/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLQEGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIRRAVENG------ETIKALTDRFIDALHEDADALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +++ + G RV
Sbjct: 112 LEPRATDFIPQMLGMIEQLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK++ P EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R + HYR P++++ + +A L++
Sbjct: 288 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDAAELDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + D L + ++G+ +
Sbjct: 344 HAQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRSLGAVIGLLGREPRAYLQ 403
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
AIE + R+ + K +++AD IR +L G LED
Sbjct: 404 QAAGAAAEGALEPAAIEAKIAARVAAKQAKDYAAADRIRAELLEAGVALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|313887550|ref|ZP_07821233.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
gi|312846428|gb|EFR33806.1| cysteine--tRNA ligase [Peptoniphilus harei ACS-146-V-Sch2b]
Length = 465
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 178/489 (36%), Positives = 248/489 (50%), Gaps = 59/489 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK +F I + +Y CGPTVY+F H+GNARP++VFD L R Y
Sbjct: 1 MKLYNTLTRKKEDFVPIKEGEVGIYNCGPTVYNFIHVGNARPLVVFDTLRRYFDYKG--M 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
V +V N TDIDDK+I +A E + S I + ++F KD L T P
Sbjct: 59 KVKFVVNFTDIDDKMINKANDEGVKV------SDIAERYIKEFKKDAGGLHLYDYETINP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI ++I IQ +I G AY +N ++ FD S +YG S++ +++ G RV
Sbjct: 113 RATEHIDEIIDFIQTLIDKGAAYVSNGDVYFDISHAKDYGKLSKKNLEDLISGHRVDVND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKNP DF LWK EP W++PWG GRPGWHIECS M+ +G DIH GG DL FP
Sbjct: 173 NKKNPQDFALWKNKKEGEPYWQAPWGEGRPGWHIECSVMAKTIIGDNIDIHTGGEDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + + AN W+HNG + ++ KMSKS GNF T+ E+ +
Sbjct: 233 HHENEIAQSETCNGV-PFANYWLHNGMITVDNEKMSKSKGNFFTVREI-------SEEFD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
V+R +L T YR PI+F+ + + + + +
Sbjct: 285 LEVLRFFLLTTQYRSPINFSREVMEQTKNSSKRLYNAKYKLEDAIEKTSVEKMTEEEENL 344
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAH 390
A+ +DLNT AI A+ L ++ N D L +
Sbjct: 345 LKGYDKHIEKFEKAMEDDLNTADAITAIFDLVKDINLNLDENSSKEVLEKSLELLKKLTK 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI E + IS IE+L++ER K K F+ AD IR +L++ G +ED ++
Sbjct: 405 VLGIM---EEEREEISGDIEELIKERNEARKNKDFTRADEIRDELKNMGIEIEDTRS--- 458
Query: 451 GQRMTRWKQ 459
T WK+
Sbjct: 459 ---GTTWKR 464
>gi|307708306|ref|ZP_07644773.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
gi|307615752|gb|EFN94958.1| cysteinyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
Length = 447
Score = 384 bits (985), Expect = e-104, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSAKSGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 NLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVNAQELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + A + GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKEALAAMLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD+IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFATADHIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|255659332|ref|ZP_05404741.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
gi|260848414|gb|EEX68421.1| cysteine--tRNA ligase [Mitsuokella multacida DSM 20544]
Length = 477
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 168/497 (33%), Positives = 245/497 (49%), Gaps = 62/497 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNT+ R+ EF+ + P + +Y CG T Y+ HIGNARP + +DV+ R
Sbjct: 1 MLKVYNTMTRRKEEFKPLKPGEVSIYCCGVTPYNHPHIGNARPFVTWDVIRRYFAKKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A +E + I+ + + + + L P
Sbjct: 60 -KVHYIQNFTDVDDKIINAANKEGVT------WKDISDRYIKAYFEAMDALNVRHADVYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + +P++I ++Q +I G+AY N ++ + +YG S R +D+ + G R+
Sbjct: 113 RVSETMPEIIAMVQKLIDKGYAYVIDNGDVYYSVEKFSHYGKLSGRSLDDMQAGARIEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W+SPWG+GRPGWHIECS MS YLGK FD HGGG DLIF
Sbjct: 173 TAKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSTMSLKYLGKKFDFHGGGSDLIF 232
Query: 243 PHHENEIAQSC-CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQS C A W+HNGF+ + KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSQACIGDDHSFAQYWLHNGFITIHNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+P VIR +L THYR P+DF+ +RL EA+ L + T +
Sbjct: 286 YPGEVIRFFILQTHYRSPLDFSDERLKEAQTSLGRLQNTKAYVDELSAKQGESDTAAELA 345
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIF 385
A A+ +D NT AI + L+++ + ++
Sbjct: 346 AKAEELRKAFYEAMDDDFNTALAISQMFALSKDINIYYQEVVNGTKAFDAADFKKVAAVY 405
Query: 386 NASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
A I+GI +E + +E ++ R K K ++ AD IR L+ G +L
Sbjct: 406 AEMAEIIGIFEQQEKAAADDGLTDKLMEIIITLRQDARKEKNWAVADKIRDALKDAGVVL 465
Query: 443 EDYKNPDNGQRMTRWKQ 459
ED RWK+
Sbjct: 466 EDT------PSGVRWKK 476
>gi|289207861|ref|YP_003459927.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
gi|288943492|gb|ADC71191.1| cysteinyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
Length = 474
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 188/482 (39%), Positives = 279/482 (57%), Gaps = 44/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ ++NTL + F+ DP + +YVCGPTVY+ H+GN RP++VFDVL+R+LR YG
Sbjct: 7 RELILHNTLGGRDEPFRPQDPERVTLYVCGPTVYNRVHVGNGRPVVVFDVLFRVLRELYG 66
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y RNITD+DDKI + A + + I+ +T + T+ F +D L L PT +
Sbjct: 67 PEHVIYARNITDVDDKINKAAAENG------EPIAALTERYTRAFHEDIAELGTLPPTLE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+HI MI LI+ +I GHAY A ++FD +S P+YG+ S R +++ + G RV
Sbjct: 121 PRATDHIQPMIELIERLIERGHAYPAEGHVLFDVTSYPDYGALSGRTLEDMQAGARVEVA 180
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + EPGW+S WG GRPGWH+EC+AM +LG + DIHGGG DL+F
Sbjct: 181 RYKRHPGDFVLWKPAAEGEPGWDSLWGYGRPGWHLECTAMIRSHLGAMIDIHGGGHDLVF 240
Query: 243 PHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
PHHENEIAQ C A+ A W+HNG + ++G KMSKS GNF +++LL
Sbjct: 241 PHHENEIAQGCAAEGCTEHGTYYARYWVHNGHVTIDGEKMSKSLGNFQLLHDLL------ 294
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-- 356
++WP V+R+A+L HYR P++F+ LT++ L+ + ++PA ++A
Sbjct: 295 -QAWPGEVLRMALLSRHYRAPLNFSEDTLTQSRNALNGLYRVLRDHADVEPAPVNAADTP 353
Query: 357 ------NDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHL--- 401
+DLNT I ALH+LA D L A A +LG+
Sbjct: 354 VFTALLDDLNTPGGITALHRLADALAAAGDPAERARLKGELTAGAGLLGLLQQDPTAWFQ 413
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ ++ +E+ + R K + F++AD IR +L ++G LED TRW
Sbjct: 414 GDGEDPGLAAWVEERIAARQAARKNRDFATADAIRDELTARGIELEDT------PEGTRW 467
Query: 458 KQ 459
++
Sbjct: 468 QR 469
>gi|324989717|gb|EGC21660.1| cysteine--tRNA ligase [Streptococcus sanguinis SK353]
Length = 447
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + F I + MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMTRSLRNFVPITEKTVNMYVCGPTVYNYIHVGNARSTVAFDTVRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDKIINRAKEEGIT------PKEVADKYIAAFREDVTALGVKPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLVDLELGASGRTDD 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T +
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ + + F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGNYTAQVKEAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQAARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|312796649|ref|YP_004029571.1| cysteinyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
gi|312168424|emb|CBW75427.1| Cysteinyl-tRNA synthetase (EC 6.1.1.16) [Burkholderia rhizoxinica
HKI 454]
Length = 483
Score = 383 bits (984), Expect = e-104, Method: Composition-based stats.
Identities = 176/484 (36%), Positives = 252/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNTL R F + +RMYVCG TVYD+ H+G+ R M+VFD++ R LR
Sbjct: 20 QLRLYNTLSRNKETFVPLHDGEVRMYVCGMTVYDYCHVGHGRLMVVFDMIQRWLRTLGY- 78
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + I +T + +D L P H+P
Sbjct: 79 -RVTYVRNITDIDDKIIRRAVDNG------EPIRALTERFIAAMHEDEAALNIQRPDHEP 131
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I QM+ +I + +G+AY + ++ + YG S + +++ + G RV +
Sbjct: 132 RATQFISQMLGMIDALERNGYAYSGRDGDVNYSVRKFAAYGQLSGKSLEDLRAGERVTQN 191
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWKRS EP GW+S WGRGRPGWHIECSAMS LG+ FDIHGGG D
Sbjct: 192 DAKEDPLDFVLWKRSKDGEPPDTGWDSKWGRGRPGWHIECSAMSCALLGERFDIHGGGQD 251
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS + N W+HNGF+N++ KMSKS GNF T+ ++L
Sbjct: 252 LQFPHHENEIAQSEGVTG-QPFVNYWLHNGFVNVDNEKMSKSLGNFFTLRDVL------- 303
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------P 349
+ + VIR+ +L HYR P++++ L +A L++ + D
Sbjct: 304 QRYDGEVIRMLILRAHYRSPLNYSDSHLDDARAALTRLYTALKNVAPDDRALDWSERHAA 363
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE------------ 395
A +A+ +D NT A AL L + + D L A +LG+
Sbjct: 364 AFRAAMNDDFNTPVAFAALFDLVTDLNRTGDPALARQLKGLAGVLGMLGRDPREYLQARA 423
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ L + I++ ++ R + K ++ AD IR L G +LED T
Sbjct: 424 PATDELAPLDAAQIDEQIEARAQAKRAKNYAEADRIRAALLEAGVVLEDKPGGK-----T 478
Query: 456 RWKQ 459
W++
Sbjct: 479 EWRR 482
>gi|150015023|ref|YP_001307277.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|187629800|sp|A6LPP1|SYC_CLOB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149901488|gb|ABR32321.1| cysteinyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 466
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 170/488 (34%), Positives = 247/488 (50%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL R+ EF I ++MYVCGPTVY+F HIGN R IVFD + R L Y
Sbjct: 1 MRVFNTLTRQKEEFIPIITGEVKMYVCGPTVYNFFHIGNGRTFIVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDK+I +A E ++ + K +++ +D L T PR
Sbjct: 59 KVRFVQNFTDIDDKMINKANDEGITV------KELGDKYIKEYYQDADSLKIERATVNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +I ++ +I G AYE + ++ + T NYG + +D+ ++G R+
Sbjct: 113 ATEYIHDIIKFVEELIEAGFAYEVDGDVYYSTKKFDNYGRLVGQNLDDLQVGARISVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ LG DIH GG+DL FPH
Sbjct: 173 KKDPMDFAVWKAQKPGEPAWESPWGPGRPGWHIECSCMAKKLLGDTIDIHAGGMDLRFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + AN W+H F+N++ +KMSKS NF T E+LE + +
Sbjct: 233 HENEIAQSEALTG-KTFANYWLHAAFVNVDNKKMSKSLNNFFTAREVLE-------EYSS 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------- 348
IR ML HYR I+FT + L A+ + + + +
Sbjct: 285 DAIRFLMLSGHYRIQINFTKELLDSAKSSIERLYNCINNLENLKDEVTKKLMDEAEEKYL 344
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHI 391
+ + +D NT AI L L ++ N + +
Sbjct: 345 KSLDKYREKFIEKMDDDFNTADAISVLFDLTKDINNNVNINSSSELCEKAESMVRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI ++ + K++ I++L+++R K K F+ AD IR L+S+ ILED
Sbjct: 405 LGIL--QDRIEKDLETEIQELIEKRQQARKNKDFALADKIRDDLKSRNIILEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 PQGVRWKK 464
>gi|288904445|ref|YP_003429666.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325977441|ref|YP_004287157.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288731170|emb|CBI12718.1| cysteinyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325177369|emb|CBZ47413.1| cysS [Streptococcus gallolyticus subsp. gallolyticus ATCC BAA-2069]
Length = 448
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 159/467 (34%), Positives = 241/467 (51%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + +F I + + MYVCGPTVY++ HIGNAR ++ FD + R Y
Sbjct: 1 MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A + + K F++D +L T
Sbjct: 61 --KVNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKQLGVKPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +++ ++I ++ ++ G AYEAN ++ F + NY + + + + ++G
Sbjct: 113 PRVIDYMDEIIDFVKVLVDKGFAYEANGDVYFRVAKSQNYAKLANKTLADLEVGASGRVD 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W+SPWG GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 GEGEIKENPLDFALWKSAHPGEVSWQSPWGEGRPGWHIECSVMATTILGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ V+R + YR+P++FT + + +A + L T T
Sbjct: 285 KNVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLTEEADAAELAKFKA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ +D NT + I + +A+ N + F + GI +E +
Sbjct: 345 DFEAAMDDDFNTANGITVIFDMAKWINSGNYNQAVKDTFAKMLAVFGIVFEEE----VLD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR QL ++G L D K+ R
Sbjct: 401 ADIEALIEKRQAARANKDFATADAIRDQLAAQGIKLLDTKDGVRWTR 447
>gi|218961048|ref|YP_001740823.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
gi|167729705|emb|CAO80617.1| cysteinyl-tRNA synthetase [Candidatus Cloacamonas acidaminovorans]
Length = 469
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 182/480 (37%), Positives = 255/480 (53%), Gaps = 48/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT RK EFQ I P + +Y CGPTVY++ HIGNAR I FDV+ R Y E
Sbjct: 1 MLLYNTQTRKKEEFQPITPGKVGIYACGPTVYNYFHIGNARAFIFFDVVRRYFTYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+NITDIDDKII +A +E N + +++ K T+ F+ DT+ L PT+QP+
Sbjct: 60 -VTYVQNITDIDDKIIAQANEE------NISFTLVAEKYTRAFLDDTSALGIKPPTYQPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + +I I + G+AYE ++ F T ++P+YG S +K +EQ G RV E Y+
Sbjct: 113 ATEVMDDIIAFIAELEKKGYAYEVEGDVYFATENLPSYGCLSGKKTEEQLAGARVMENYN 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++PADF LWK+ P EP WESPWG+GRPGWH EC MS YLG+ FDIH GG+DLIFPH
Sbjct: 173 KRHPADFTLWKKGKPGEPVWESPWGKGRPGWHTECVVMSQKYLGETFDIHCGGIDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQ+ + AN W+HNGFLN++G KMSKS NF T ++L + A
Sbjct: 233 HENELAQAMAYSG-KPLANYWMHNGFLNVDGEKMSKSLKNFFTARDILA-------EYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------------TSTSK 344
IR L HYR PIDF+ + + E++ ++ T+
Sbjct: 285 ESIRFFFLSKHYRSPIDFSRELMEESQRAVANLYSSLAEINYPENAENRRPTVCGTAQEL 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNA------SAHILGIEV- 396
++ + A+ +D NT AI L +L R+ + + +A +LG
Sbjct: 345 QNLEQEFILAMDDDFNTAKAISLLFELNRKVKNTSATMADRISAAIKMVELGSVLGFFQN 404
Query: 397 ----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
K+ + I ++ R K ++ AD IR L G ++D
Sbjct: 405 LEAKLKQKMPDLSKDLICLILSYRKEARDKKDWALADKIRNDLAQLGIEIKDTPEGVKWT 464
>gi|326403598|ref|YP_004283680.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
gi|325050460|dbj|BAJ80798.1| cysteinyl-tRNA synthetase [Acidiphilium multivorum AIU301]
Length = 449
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 200/467 (42%), Positives = 267/467 (57%), Gaps = 32/467 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+IK++NT R+ F DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +
Sbjct: 3 QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLF-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKI RA + + I IT++ T F +D L C P +P
Sbjct: 61 PRVTYVRNITDIDDKINARAAETG------ETIGEITARTTSWFHEDMAALYCAPPDIEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI +I LI+ +I GHAY A ++F ++ YG FS R +E G RV
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S P PGW+SPWGRGRPGWHIECSAM LG+ DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA + A +W+H G L + G+KMSKS GNF T+ ++L+ P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVNGQKMSKSLGNFRTVQDVLDEA-------P 287
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYN 357
+R +L THYR +DF+ L EA+ L ++ + A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL-GIEV--CKEHLNKN--ISIAIEKL 412
DLNT AI LH LA + + +A +L GI + I+ L
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTADQWFRGEATDDARIDAL 407
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ ERL + K F+ AD IR +L + G +LED G T W++
Sbjct: 408 IAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448
>gi|300704462|ref|YP_003746065.1| cysteine tRNA synthetase [Ralstonia solanacearum CFBP2957]
gi|299072126|emb|CBJ43458.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
Length = 465
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 252/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+ +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIESGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII+RA + + I +T + +D L P
Sbjct: 60 GYG--VTYVRNITDIDDKIIKRAVENG------ETIGALTDRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ A+ ++ + YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGKLQANGLAYQAADGDVNYAVRKFAGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWTSPWGEGRPGWHIECSAMSCELLGTHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQ+ A+ N W+HNGF+ + KMSKS GNF TI E+L
Sbjct: 232 GADLQFPHHENEIAQAEGANGN-TFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH--- 400
A+ +D NT A+ L +LA E K L A ++G+ H
Sbjct: 344 SHGQRFREAMNDDFNTPVAMAVLFELASEVNKTRSAALASQLAALGGVMGLLGRDPHAFL 403
Query: 401 -------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + +E ++ R + + F+ AD IR L + G +LED
Sbjct: 404 QGGVGAAADGLDTAEVEARIEARRVAKAARDFARADGIRADLLAAGIVLEDKPGG----- 458
Query: 454 MTRWKQ 459
+T W++
Sbjct: 459 VTEWRR 464
>gi|225851008|ref|YP_002731242.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
gi|254781689|sp|C0QRE6|SYC_PERMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|225645417|gb|ACO03603.1| cysteinyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 487
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 176/509 (34%), Positives = 253/509 (49%), Gaps = 73/509 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL K EF I P +++Y CG TVYD H+G+ R +IVFDV+ R LRY
Sbjct: 1 MSLKVYNTLTGKKEEFVPIKPGEVKIYTCGVTVYDVNHVGHGRSLIVFDVIRRYLRYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA+ E ++I + +++ +D +
Sbjct: 61 --NVYFVRNFTDVDDKIINRAKNECL------PFTVIADRYIKEYFQDAENFRIEPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ +I G+AYE ++ F YG S+R +DE G RV
Sbjct: 113 PRVTTHIPDIIDFIQRLIDKGYAYEVEGDVYFSVRKFKEYGKLSKRSVDELIAGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S EP W+SPWG+GRPGWH EC AM +LG+ DIHGGGLDL F
Sbjct: 173 EKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+ + A WIHNG + + G+KMSKS GN+IT+ E+ +
Sbjct: 233 PHHENELAQAEALSD-KPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
V+RL +L HYR P+DF+ +++ E + + I+
Sbjct: 285 DPDVLRLLVLSVHYRSPLDFSWEKMEETKKAYERLKGAIDEYEILKKLPENPDFDEHLYD 344
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
+ +A+ +D NT A+ +L L RE D L + ++ +
Sbjct: 345 EIAKAEQGFYAAMSDDFNTPEALASLFTLVREMNILRDKAVKSGGISKKALESYKEASDV 404
Query: 392 L--------GIEVC------------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
L G+ ++ K + +E L++ R K K+F ADYI
Sbjct: 405 LHSIGKEIFGLFDSLQPCIEVEEIKVEKAEEKIDTQLVEALIEVRNKARKEKQFEIADYI 464
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQK 460
R++L G ++ED T+WK+K
Sbjct: 465 REKLSQLGIVIEDT------PVGTKWKKK 487
>gi|169824112|ref|YP_001691723.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
gi|229558634|sp|B0S0W3|SYC_FINM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|167830917|dbj|BAG07833.1| cysteinyl-tRNA synthetase [Finegoldia magna ATCC 29328]
Length = 462
Score = 383 bits (983), Expect = e-104, Method: Composition-based stats.
Identities = 174/478 (36%), Positives = 246/478 (51%), Gaps = 47/478 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ I N+ +YVCGPTVY++ H+GNARP++VFD L R Y
Sbjct: 1 MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRYFIYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V +V N TDIDDKII +A+ E N IT K Q ++ + + L T P
Sbjct: 59 NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLDNVSGLNFDEDDTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT +I +MI ++ + G AY + + FD + +YG S++ ID+ + G R+
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172
Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK+ EP WESPWG GRPGWH+ECS MS LG DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKTILGDTIDIHAGGEDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS AN W+HN + ++ KMSKS NF + ++ + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
VIRL +L HYR PIDF+ L + L + I
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIK 344
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
A+ +D+NT AI L + KN+ D + + +++LGI
Sbjct: 345 TFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGIL 404
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ + ++ IE+L+++R K K F AD IR +L S G +L+D ++ +R
Sbjct: 405 FKED--DDDLDSEIEELIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460
>gi|15612674|ref|NP_240977.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
gi|11387138|sp|Q9KGF4|SYC_BACHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|10172723|dbj|BAB03830.1| cysteinyl-tRNA synthetase [Bacillus halodurans C-125]
Length = 466
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 260/488 (53%), Gaps = 55/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++N+L RK F ++ ++MYVCGPTVY++ HIGNARP IV+D++ R L+Y
Sbjct: 1 MAIQVFNSLTRKKEPFVPLEEGKVKMYVCGPTVYNYIHIGNARPPIVYDMIRRYLKYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V N TD+DDKII A + + + + + ++ + + +DT+ L L H
Sbjct: 61 E--VLFVSNFTDVDDKIIRVANE------LGEDVFAVANRFIEAYKQDTSALGVLEADHH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + ++I I+ + G+AYE ++ F T YG S + ID+ G R+
Sbjct: 113 PRVTETMSEIISFIRVLEEKGYAYEQGGDVYFRTRKFKEYGKLSAQSIDDLLSGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 ERKEDPLDFVLWKAAKEGEVSWDSPWGKGRPGWHIECSAMVKKYLGDTIDIHAGGQDLKF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + AN W+HNGF+NL+ KMSKS GN + NE++ R
Sbjct: 233 PHHENEIAQSECMTG-KPMANYWLHNGFINLDNEKMSKSLGNVVLANEMI-------RQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
A V+R ML HYR PI+F+ + L A+ L +
Sbjct: 285 SAEVLRFFMLSAHYRSPINFSDELLEGAKRGLERLQTAVSSLVHRLQESADFGGTEPWLE 344
Query: 346 IIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
ID + + +D N+ + I L LA+E+ + + +FN +
Sbjct: 345 RIDEFRGRFIEEMDDDFNSANGIAVLFDLAKEANRYLREEQTSKAVLQSFIDLFNELGGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + ++ + + IE+L++ER K K F AD IR QL+++G ILED
Sbjct: 405 LGVTLNRQE--ELLDEEIERLIEERNEARKAKNFQRADDIRDQLKAEGIILEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 PQGVRWKR 464
>gi|147668707|ref|YP_001213525.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
gi|187629809|sp|A5FP90|SYC_DEHSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146269655|gb|ABQ16647.1| cysteinyl-tRNA synthetase [Dehalococcoides sp. BAV1]
Length = 457
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 175/477 (36%), Positives = 242/477 (50%), Gaps = 42/477 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ EF ++ ++MYVCG T HIG+A I FDV+ R L Y
Sbjct: 1 MKIYNTLSGKLEEFVPLENDKVKMYVCGITPQSEPHIGHAMSYINFDVIRRYLTYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TDIDDKII +A + S + +N F+ L + PR
Sbjct: 59 RVKYIQNFTDIDDKIIAKANAQGIE------PSTLAERNIGVFLDAMAALNITPADYYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +P++I ++ +I G+AY + + + YG S R +++ G RV
Sbjct: 113 ATQEVPKIIEIVSGLIDKGYAYAVDGSVYLRVQKVDGYGKLSHRTLEQMMAGARVEIDEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 173 KEYPMDFALWKATKPGEPSWESPWGLGRPGWHIECSAMSLRYLGEQIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C ++ W+HNG L L KMSKS GN +TI E L + A
Sbjct: 233 HENEIAQSECFSGVKPFVKYWLHNGLLKLGEEKMSKSLGNLVTIKEALSR-------YSA 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------IIDPAVL 352
+R+ +L + YR P+ ++ + L AE + QT+ K
Sbjct: 286 DALRIFVLSSSYRNPLTYSEEALEAAEKGAERLRQTAARKDNPQFKETTVDTKAYRERFT 345
Query: 353 SALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFNASAHILGIEV--CKEHLNK 403
+ ND NT +A+ + L+RE K+ D +F A ILG+ + +
Sbjct: 346 QYMDNDFNTSAALATIFDLSRELNRIEGEAGKSTDGQKLFKELADILGLSLIVAESKTGT 405
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ IE L++ R L K++ AD IR L++ G +LED T WK K
Sbjct: 406 DVAPFIELLIELRKDLRVAKQYQLADKIRTSLDTAGILLEDS------AGGTVWKVK 456
>gi|256829728|ref|YP_003158456.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256578904|gb|ACU90040.1| cysteinyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 485
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 173/499 (34%), Positives = 245/499 (49%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYN+L RK EF + P ++ MYVCG T YD+ HIG+AR +VFDVL R LRY
Sbjct: 1 MQIYNSLTRKKEEFIPLKPGHVSMYVCGITAYDYCHIGHARSAVVFDVLVRYLRYIG--M 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII RA +E I F D RL L +P+
Sbjct: 59 QVTFVRNFTDVDDKIINRANREGTD------FESIARSYIDAFYTDMDRLGILRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +MI L +N+I HAY + ++ F S +YG S R I++ G R+
Sbjct: 113 ATEHIKEMIELCENLIAKKHAYSTPSGDVYFRVRSYADYGKLSGRNIEDLMSGARIEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWHIECSAMS YL FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKGAKPGEPSWPSPWGPGRPGWHIECSAMSERYLPLPFDIHGGGQDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ A ++ W+HNGF+ + KMSKS NF+TI ++L ++
Sbjct: 233 HHENERAQTEAATD-KQFVRYWVHNGFVQINSEKMSKSLNNFVTIRDILA-------NYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
V+R ++ HYR P+D+T L E+E L + T T+
Sbjct: 285 PEVLRFFLITKHYRSPLDYTSDALEESERALKRIYLTKTAAEAHVAGTKWTATPLPAEIV 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
++ ++ +D+NT +A+ + L + + + L +F
Sbjct: 345 VEATALEAKWDDSMADDMNTAAALGHVFVLMKIVNRILEDKTLKKSEQGRDMIRHALKLF 404
Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ + K + ++ +QER K F+ +D IR
Sbjct: 405 ERWGEVLGLFLMPSSDFLTQLKESRVLRRKIDTDLVQTKLQERKEARAAKDFARSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G ++D
Sbjct: 465 ELLALGVTIQDTAQGVQWD 483
>gi|317051773|ref|YP_004112889.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316946857|gb|ADU66333.1| cysteinyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 465
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 177/487 (36%), Positives = 251/487 (51%), Gaps = 52/487 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNT +F I+P R+YVCG T YD HIG+AR + FD + R L Y E
Sbjct: 1 MIRLYNTQSSSKEDFIPIEPGKARIYVCGVTTYDHCHIGHARSAVAFDSIRRYLSYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TDIDDKII RAR+ + + + + +D L L PT P
Sbjct: 61 --VTFVKNYTDIDDKIINRARENG------EEWKALAERFISEHDRDMAALYVLPPTIAP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT H+P+MI LI+ ++ +G+AY+ ++I F YG S + +++ + G+RV
Sbjct: 113 RATEHLPEMIALIEKLLDNGYAYKGGDDIFFRVHRFTEYGKLSHKALEDLQSGSRVEVNP 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF+LWK EP WE+ +G GRPGWHIECSAM +LG+VFDIHGGG DLIFP
Sbjct: 173 LKENPLDFVLWKGKKEGEPSWEASFGAGRPGWHIECSAMGHKHLGRVFDIHGGGKDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A WIHNGF+N+ KMSKS GNF TI E+L + +
Sbjct: 233 HHENEIAQSQAGYGCAP-ARYWIHNGFVNINNEKMSKSLGNFFTIKEIL-------QHYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------KGII 347
V+RL + THYR PIDF + +T A L K + + I
Sbjct: 285 PEVLRLFLAQTHYRSPIDFCEENMTMARQALEKLYRFLENFENHEDTRTSDSIAPVLSDI 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFNA---SAHILGIE----- 395
A+ +D N+ A+ +L + K + D I++ +LGI
Sbjct: 345 TRKFEEAMDDDFNSALALASLFEGVHTLNKLNPSSADAKGIYDTYCRLGDVLGIFQSLPS 404
Query: 396 --VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ ++ + I ++ R + K F++AD IR +L G ++D K
Sbjct: 405 QWFARQSTSQLSADEIAARIEARNAARRDKDFATADRIRDELLENGVEIKDSK------E 458
Query: 454 MTRWKQK 460
T W+ +
Sbjct: 459 GTSWRYR 465
>gi|242280816|ref|YP_002992945.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
gi|259511828|sp|C6BS23|SYC_DESAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|242123710|gb|ACS81406.1| cysteinyl-tRNA synthetase [Desulfovibrio salexigens DSM 2638]
Length = 485
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 172/498 (34%), Positives = 240/498 (48%), Gaps = 67/498 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK EF ++ + + +Y CG T YD HIG+AR +VFD+L R LR+ +
Sbjct: 1 MRLYNTLNRKKEEFVPLNGNKVNLYACGITAYDLCHIGHARSSVVFDILVRYLRFKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TDIDDKII RA + + + K +F D +L L +P+
Sbjct: 60 -VTFVRNFTDIDDKIINRANETGVTST------ELAEKFIGEFYVDMDKLNILRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HIP+MI L Q +I HAY + ++ F S +YG S R I++ + G R+
Sbjct: 113 CTEHIPEMIELTQTLIEKDHAYATPSGDVYFKVRSFDDYGKLSGRNIEDLQSGARIQPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS Y FDIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGQGRPGWHLECSAMSEKYFELPFDIHGGGQDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E A W+HNGF+ + KMSKS GNF TI ++L+ +
Sbjct: 233 HHENEIAQSEAATGKE-MARFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFM 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
+R +L HYR P+DF+ + L EAE + +
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFEALEEAEKGIRRVYSALEQTAEALNKSKWSKAALPEEVL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
+ A+ +D+NT A+ + L R + + + +L
Sbjct: 345 AEIEDAEKGWADAMEDDMNTAGAMGHMFTLIRLAGRIGEEKSWRKSEGGRDAWIRILEDM 404
Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LGI +E+LV R K K F+ +D IR
Sbjct: 405 KKWGEVLGIFTRDPKEFLEELKLCMLERKGIEVAKVEELVAARQEARKNKDFARSDEIRD 464
Query: 434 QLESKGFILEDYKNPDNG 451
+L G ++D
Sbjct: 465 ELIELGVEVKDTPQGAVW 482
>gi|320162457|ref|YP_004175682.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319996311|dbj|BAJ65082.1| cysteinyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 468
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 178/489 (36%), Positives = 247/489 (50%), Gaps = 53/489 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL RK F+ ++P +RMYVCGPTVY+ AH+G+A +VFD++ R L Y
Sbjct: 1 MALKIYNTLTRKKEPFETLEPGKVRMYVCGPTVYNKAHVGHAMSALVFDIIRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V + N TD+DDKII RA Q + Q++ K+ L L T
Sbjct: 61 Q--VKHAMNYTDVDDKIILRASQLGMD------PFALAETYIQEYRKNLEDLNVLPATIN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT I Q+I +IQ +I G+AY N ++ F + +YG S RK+DE + G R+
Sbjct: 113 PRATQEIDQIIAIIQGLIEKGYAYPAPNGDVYFRVTRDEDYGRLSGRKLDEMQAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+ H+LG+ DIHGGG DLI
Sbjct: 173 GEQKEHPMDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMNLHHLGEQIDIHGGGNDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + A W+HNG L G KMSKS GN +TI E L
Sbjct: 233 FPHHENEIAQSESYTG-KPFARYWVHNGMLQFGGEKMSKSLGNLVTIEEFLARH------ 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------ST 342
A V+RL +L + YR P+ F + + E L +
Sbjct: 286 -DADVLRLMVLNSGYRAPLTFNDDVIEQTERALERLKSALRPALPGAAGISAEAVKALEE 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAHIL 392
A+ +D NT A+ L +L R + A +L
Sbjct: 345 QARAARAGFEEAMDDDFNTAGALSHLFELVRAINSARTEGATDEQLRVGQDVLRELAGVL 404
Query: 393 GIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
G+ + +E + + I+ L++ R L K K ++ +D IR +L + G LED +
Sbjct: 405 GLRLRMEEEKPQEAAPFIDLLIEVRTELRKQKLWALSDLIRDRLTALGVTLEDTR----- 459
Query: 452 QRMTRWKQK 460
T W+ +
Sbjct: 460 -EGTTWRYQ 467
>gi|306845278|ref|ZP_07477854.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
gi|306274437|gb|EFM56244.1| cysteinyl-tRNA synthetase [Brucella sp. BO1]
Length = 506
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 292/502 (58%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELLETKKFGGRSWP---------APVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWSDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K+ D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKSRDVAAL 421
Query: 385 FNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ +V + AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLFDPYFVTASDVPIFAKADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|269798076|ref|YP_003311976.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
gi|269094705|gb|ACZ24696.1| cysteinyl-tRNA synthetase [Veillonella parvula DSM 2008]
Length = 482
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 166/501 (33%), Positives = 242/501 (48%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E S I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGVS------WDTIANRYIDSYFEVMDALGVQRADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HI +I +IQ +I G+AYE + ++ + +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIEDIITMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGACDEAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++G+ N ++ ++ R + K+++ AD IR +L G
Sbjct: 406 FKFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED + RWK++
Sbjct: 466 ITIEDS------PQGARWKKR 480
>gi|209542601|ref|YP_002274830.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|209530278|gb|ACI50215.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 453
Score = 382 bits (982), Expect = e-104, Method: Composition-based stats.
Identities = 197/469 (42%), Positives = 268/469 (57%), Gaps = 32/469 (6%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ ++++ RK F +DP N+R+Y CGPTVYD AHIGN R M+ D+L RLLR+ Y
Sbjct: 5 MPQLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRNITD+DDKI RAR + I +T++ + F +D + L P
Sbjct: 65 --PRVTYVRNITDVDDKINTRARANG------ETIDSLTARTIRDFHEDLDAVGILPPDI 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT+HI +M+ LI +I GHAYEA ++F S P YG+ S R ++ G RV
Sbjct: 117 EPRATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K++P DF+LWK S P PGWESPWGRGRPGWHIECSAMS YLG+ FDIHGGG DL+
Sbjct: 177 APYKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLL 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C + AN W+HN L + G KMSKS GNF+T+ + L
Sbjct: 237 FPHHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS------ 290
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALY 356
PA +RL +L YR ++FT+ L +A+ L+++ + + VL+AL
Sbjct: 291 -PAEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALC 349
Query: 357 NDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNI-----SIAIE 410
+DLNT A+ +H LA R + D A+ +LG+ E IE
Sbjct: 350 DDLNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIE 409
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+L+ ER K + F+ AD IR+ L G +LED G T W++
Sbjct: 410 RLIVERQDARKSRDFARADAIRESLAKDGIVLED------GPSGTTWRR 452
>gi|148260406|ref|YP_001234533.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
gi|187629816|sp|A5FYD2|SYC_ACICJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146402087|gb|ABQ30614.1| cysteinyl-tRNA synthetase [Acidiphilium cryptum JF-5]
Length = 449
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 200/467 (42%), Positives = 267/467 (57%), Gaps = 32/467 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+IK++NT R+ F DP+++++YVCGPTVYD AH+GNAR ++VFD L RLLR+ +
Sbjct: 3 QIKLHNTKTRRREPFAPADPAHVKLYVCGPTVYDRAHLGNARTVVVFDTLVRLLRHLF-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKI RA + + I IT++ T F +D L C P +P
Sbjct: 61 PRVTYVRNITDIDDKINARAAETG------ETIGEITARTTSWFHEDMAALYCAPPDIEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI +I LI+ +I GHAY A ++F ++ YG FS R +E G RV
Sbjct: 115 RATGHIGDIIALIERLIARGHAYAAEGHVLFAVATDAEYGKFSGRSPEELLAGARVDVAT 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S P PGW+SPWGRGRPGWHIECSAM LG+ DIHGGG DLIFP
Sbjct: 175 YKRDPGDFVLWKPSPPDLPGWDSPWGRGRPGWHIECSAMIHATLGETIDIHGGGADLIFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA + A +W+H G L ++G+KMSKS GNF T+ ++L P
Sbjct: 235 HHENEIAQSCCAFPGSEFARVWVHAGMLQVDGQKMSKSLGNFRTVQDVLGEA-------P 287
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYN 357
+R +L THYR +DF+ L EA+ L ++ + A + AL +
Sbjct: 288 GEAVRFLLLKTHYRGVLDFSTAALAEAKRELDRFYRALEKHADPAPAATPPAAFIEALAD 347
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL-GIEV--CKEHLNKN--ISIAIEKL 412
DLNT AI LH LA + + +A +L GI + I+ L
Sbjct: 348 DLNTPGAIAELHALADAAMQGDAASAAGLRAAGMLIGIFNHTADQWFRGEATDDARIDAL 407
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ ERL + K F+ AD IR +L + G +LED G T W++
Sbjct: 408 IAERLAARRNKDFARADAIRAELAAAGILLED------GPGGTTWRR 448
>gi|309799903|ref|ZP_07694108.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
gi|308116493|gb|EFO53964.1| cysteinyl-tRNA synthetase [Streptococcus infantis SK1302]
Length = 457
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 163/463 (35%), Positives = 235/463 (50%), Gaps = 30/463 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I + MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 11 MIKIYDTMSRDLREFVPITKGEVLMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 70
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 71 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRYP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 123 RVVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 182
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 183 ETARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ LET
Sbjct: 243 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDALET------ 295
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDP--------A 350
V+R HYR+PI+FT + R E + K G +DP
Sbjct: 296 -IDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDPGELQAFKDK 354
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
++A+ D NT + I + ++A+ + + A +L + + + IE
Sbjct: 355 FVAAMDEDFNTANGITVIFEMAKWINSGNYDAAVKETLAAML-EVFGVVFVEEVLDEEIE 413
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
L+Q+R K F++AD IR QL ++G L D K+ R
Sbjct: 414 ALIQKRQEARANKDFATADQIRDQLAAQGIKLLDTKDGVRWTR 456
>gi|295396934|ref|ZP_06807057.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
gi|294974827|gb|EFG50531.1| cysteine--tRNA ligase [Aerococcus viridans ATCC 11563]
Length = 473
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 161/494 (32%), Positives = 241/494 (48%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL + EF+ + P +I MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MLKIYNTLTNQKEEFKPLVPGSISMYVCGPTVYNYIHIGNARSTVAFDTVRRYFEYRGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII RA +E + I K + F +DT L T P
Sbjct: 61 --VKYVSNFTDVDDKIINRANEEGLT------PEQIADKYIEAFYEDTDALNVKRATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++ +I + +++ AY + ++ + T YG S + ID+ + G +
Sbjct: 113 RVVENMDDIIQFVADLVDKDFAYVVDGDVYYRTRKFEKYGQLSDQNIDDLRAGASERLEA 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK + P E W SPWG GRPGWHIECS M++ LG DIH GG D
Sbjct: 173 DSQSKKEDVVDFALWKSAKPGEISWTSPWGEGRPGWHIECSVMATKLLGDTLDIHAGGHD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS AN W+HNGF+ + + KMSKS GNF+ ++L+
Sbjct: 233 LTFPHHENEIAQSEAHTG-HTFANYWMHNGFVTMGDDDEKMSKSLGNFVLAHDLM----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R + HYR P+ F + + +A L+ +
Sbjct: 287 --KQVDPQVVRFFLASAHYRSPLRFNEENIQDATNNLNNLKTAYANLNYRFEDAKAQLDN 344
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------F 385
++ + A+ +D+NT + + +++L R+ + + F
Sbjct: 345 DAEVLAQIKALENEFIEAMDDDVNTPNGLTVVYRLMRDMNVYTNQKEVSIPVLEAFKESF 404
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
A I G+ + E + ++ I+ L+ ER K F+ AD IR QL+++G IL+D
Sbjct: 405 TALLTIFGVTLSDEQ--ELLADDIQALIDERNQARADKNFARADEIRDQLKAEGIILDDT 462
Query: 446 KNPDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 463 ------AQGTRWKR 470
>gi|238019166|ref|ZP_04599592.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
gi|237863865|gb|EEP65155.1| hypothetical protein VEIDISOL_01029 [Veillonella dispar ATCC 17748]
Length = 497
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 166/501 (33%), Positives = 240/501 (47%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 16 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E S I ++ + + L
Sbjct: 76 Y--KVTYVQNFTDVDDKIINTSNGEGVS------WDTIANRYIDSYFEVMDALGVQRADI 127
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HI +I +I +I G+AYE + ++ + +YG S R +D+ + G R+
Sbjct: 128 YPRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEV 187
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FD HGGG DLI
Sbjct: 188 DGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLI 247
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + W+HNGF+ + KMSKS NF + ++LE
Sbjct: 248 FPHHENEIAQSEGCSGQHPSVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 300
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 301 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQHL 360
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A+ +D NT A ++ LA+E ++ I
Sbjct: 361 LEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQTVTGREGVVCQEAIAEVKRI 420
Query: 385 FNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++GI N ++ ++ R K+++ AD IR +L G
Sbjct: 421 FKFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWALADCIRDRLAEIG 480
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED + RWK++
Sbjct: 481 ITIEDS------PQGARWKKR 495
>gi|256254697|ref|ZP_05460233.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
gi|261221878|ref|ZP_05936159.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
gi|260920462|gb|EEX87115.1| cysteinyl-tRNA synthetase [Brucella ceti B1/94]
Length = 506
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 291/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGTPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|221632709|ref|YP_002521930.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
gi|221155785|gb|ACM04912.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
Length = 465
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 173/484 (35%), Positives = 240/484 (49%), Gaps = 49/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ +F+ ++P ++RMYVCGPTVY AHIG+A IVFD++ R L Y
Sbjct: 1 MTLRVTNTLTREKEQFETLEPGHVRMYVCGPTVYSDAHIGHAMSAIVFDMIRRYLEYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+ N TDIDDKII+RA + + + ++ +T L T
Sbjct: 61 --RVTFAMNFTDIDDKIIQRAA------TLGLPPHELAEQLIDAWLDETAALNIKPATIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT IP +I +++ +++ GHAY + ++ F S P YG S R ++E G RV
Sbjct: 113 PRATQEIPTIIEMVKGLLVKGHAYTIDGDVYFRVLSFPEYGKLSHRTLEEMLAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWHIECSAM +LG+ DIHGGG DLIF
Sbjct: 173 PRKEHPMDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGEQIDIHGGGADLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + W+HNG L L G KMSKS GN ITI ELL G
Sbjct: 233 PHHENEIAQSEAFTGKKPFVRYWLHNGLLQLGGEKMSKSIGNLITIRELLARNGAGP--- 289
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
RL +L +HYR P+ FT + A + +
Sbjct: 290 ----FRLLVLSSHYRSPLTFTEEAFEAATRGFDRLRLAVQGVEPAELPNRPEHELATLAD 345
Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------SAHILGIE 395
A+ +D +T A+ L +LAR + A A +LG
Sbjct: 346 ATRLAFRQAMDDDFDTPVALARLFELARAINRARASGERLEAIRYAQFTLLELATVLGFR 405
Query: 396 VCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
++ ++ I+ L+ R L +++ ADYIR +L G ++ED
Sbjct: 406 FDEQSTGRQSAEPFIDLLLDVRARLRAQRQWELADYIRGRLNELGVLVEDT------PGG 459
Query: 455 TRWK 458
T W+
Sbjct: 460 TTWR 463
>gi|81429293|ref|YP_396294.1| cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
gi|109894906|sp|Q38UZ6|SYC_LACSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78610936|emb|CAI55988.1| Cysteinyl-tRNA synthetase [Lactobacillus sakei subsp. sakei 23K]
Length = 468
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 162/492 (32%), Positives = 248/492 (50%), Gaps = 61/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F+ ++ ++MYVCGPTVY++ HIGNAR I FD + R L Y +
Sbjct: 1 MLTVYNTLTRQKETFKPLEEGRVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A E+ ++P + + F +DT L T P
Sbjct: 61 --VDYVSNFTDVDDKMIKAANAENITVP------ELADRYITAFKEDTKALNIEPATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT++I +++ IQ++I +AY + ++ + YG + + +D+ + G
Sbjct: 113 RATDNIEEIVAFIQDLIAKDYAYAVDGDVYYRARKFKAYGHLAGQDLDQLEQGASEHTAT 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK E WESPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EETLRKEDPIDFALWKAEKGNEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS + N W+HNGF+ + + +KMSKS GNF+T+++L+
Sbjct: 233 LEFPHHENEIAQSEAKTG-QTFVNYWLHNGFVTVGDDDQKMSKSLGNFVTVHDLI----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
+ +R M T YR PI ++ L EA+ L + T
Sbjct: 287 --QEVNPQALRFLMSSTQYRRPIRYSQSLLAEAQTNLDRLKTTLDNLAFRQPTAEPGEDQ 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ A ++A+ +D N + + L++LA+ S + + L
Sbjct: 345 IVMDKAAELEAAFVTAMDDDFNVQNGLTQLYELAKLSNQYLEQPTVQSDTLTSLATRLTR 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+ ++ + +E L++ER K F+ +D IR QL+++G ILED
Sbjct: 405 LLAIFGVVF---KADQLLDTEVESLIEERQAARAAKDFAKSDAIRDQLKAQGIILEDT-- 459
Query: 448 PDNGQRMTRWKQ 459
+ RW++
Sbjct: 460 ----PQGMRWRR 467
>gi|303234834|ref|ZP_07321459.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
gi|302493952|gb|EFL53733.1| cysteine--tRNA ligase [Finegoldia magna BVS033A4]
Length = 462
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 174/478 (36%), Positives = 245/478 (51%), Gaps = 47/478 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ I N+ +YVCGPTVY++ H+GNARP++VFD L R Y
Sbjct: 1 MKLYNTLTRKKEEFKPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRYFIYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V +V N TDIDDKII +A+ E N IT K Q ++ + + L T P
Sbjct: 59 NVKFVSNFTDIDDKIINKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT +I +MI ++ + G AY + + FD + +YG S++ ID+ + G R+
Sbjct: 113 KATEYIDEMIKFVKTLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNS 172
Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK+ EP WESPWG GRPGWH+ECS MS LG DIH GG DL F
Sbjct: 173 EKKNPMDFALWKKRKEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS AN W+HN + ++ KMSKS NF + ++ + +
Sbjct: 233 PHHENEIAQSETCTGAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
VIRL +L HYR PIDF+ L + L + I
Sbjct: 285 DLEVIRLWLLSVHYRNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIK 344
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
A+ +D+NT AI L + KN+ D + + +++LGI
Sbjct: 345 TFREKFEQAMDDDINTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGIL 404
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ + ++ IE L+++R K K F AD IR +L S G +L+D ++ +R
Sbjct: 405 FKED--DDDLDSEIEDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 460
>gi|163791190|ref|ZP_02185607.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
gi|159873521|gb|EDP67608.1| cysteinyl-tRNA synthetase [Carnobacterium sp. AT7]
Length = 468
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 165/492 (33%), Positives = 245/492 (49%), Gaps = 61/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL RK F I+ +RMYVCGPTVY++ HIGNAR + FD + R L Y +
Sbjct: 1 MLKIYNTLTRKKEAFIPIEEGKVRMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII A++ + + P + K + +DT L +H P
Sbjct: 61 --VNYVSNFTDVDDKIIRTAKELNLTAP------EVADKFIAAYHEDTHALGVEEASHHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV 179
R ++P +I I +I +AYE + ++ + T NYG S IDE ++
Sbjct: 113 RVMENMPDIIDFIAVLIEKEYAYEVDGDVYYRTRKFKNYGELSDISIDELEVGASNRLNA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K++P DF LWK + E WESPWG GRPGWHIECS M++ YLG DIH GG D
Sbjct: 173 QENNKKEDPLDFALWKAAKEAEINWESPWGPGRPGWHIECSVMATKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A+ W+HNGF+ ++ KMSKS GNF+ +++++
Sbjct: 233 LAFPHHENEIAQSEAKTG-HPFAHYWMHNGFVTMDNEKMSKSLGNFVLVHDII------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
+ ++R M T YR PI ++ + EA L+K +
Sbjct: 285 KQVDPQILRFFMATTQYRRPISYSETTIEEARANLTKITMAFDNVTYRLKDAAAVGEDDQ 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ ++ + +D N+ + I ++++A+ + +L F
Sbjct: 345 EQISQFKLFKENFVTEMDDDFNSANGITVIYEMAKAMNIYSERTVVSKVVLEAMLHQFQE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ GI + + + IE+L++ER K F +D IR QL+ +G IL+D
Sbjct: 405 LVQVFGITFGE---TELLDETIEQLIEERNAARAAKNFQRSDDIRDQLKEEGIILDDT-- 459
Query: 448 PDNGQRMTRWKQ 459
+ TRW++
Sbjct: 460 ----PQGTRWRR 467
>gi|62289637|ref|YP_221430.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82699565|ref|YP_414139.1| cysteinyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
gi|189023890|ref|YP_001934658.1| cysteinyl-tRNA synthetase [Brucella abortus S19]
gi|237815131|ref|ZP_04594129.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
gi|254693431|ref|ZP_05155259.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|254697084|ref|ZP_05158912.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|254729980|ref|ZP_05188558.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|256257197|ref|ZP_05462733.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|260545608|ref|ZP_05821349.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
gi|260757658|ref|ZP_05870006.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
gi|260761485|ref|ZP_05873828.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883467|ref|ZP_05895081.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|261213685|ref|ZP_05927966.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
gi|297248048|ref|ZP_06931766.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
gi|81309440|sp|Q57E65|SYC_BRUAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109894886|sp|Q2YN22|SYC_BRUA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558619|sp|B2S4T7|SYC_BRUA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|62195769|gb|AAX74069.1| CysS, cysteinyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82615666|emb|CAJ10653.1| Cysteinyl-tRNA synthetase, class Ia [Brucella melitensis biovar
Abortus 2308]
gi|189019462|gb|ACD72184.1| Cysteinyl-tRNA synthetase, class Ia [Brucella abortus S19]
gi|237789968|gb|EEP64178.1| cysteinyl-tRNA synthetase [Brucella abortus str. 2308 A]
gi|260097015|gb|EEW80890.1| cysteinyl-tRNA synthetase [Brucella abortus NCTC 8038]
gi|260667976|gb|EEX54916.1| cysteine-tRNA ligase [Brucella abortus bv. 4 str. 292]
gi|260671917|gb|EEX58738.1| cysteine-tRNA ligase [Brucella abortus bv. 2 str. 86/8/59]
gi|260872995|gb|EEX80064.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|260915292|gb|EEX82153.1| cysteine-tRNA ligase [Brucella abortus bv. 3 str. Tulya]
gi|297175217|gb|EFH34564.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
Length = 506
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 291/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|260584970|ref|ZP_05852714.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
gi|260157400|gb|EEW92472.1| cysteine--tRNA ligase [Granulicatella elegans ATCC 700633]
Length = 470
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 159/491 (32%), Positives = 244/491 (49%), Gaps = 57/491 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNTL R+ EF+ ++P ++MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIQVYNTLTRQKEEFKPLEPGIVKMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A + + ++ K + F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKIIKAANETGMT------PEEVSKKYIEAFYEDTAALNVKKATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRV 179
N + +I ++ ++ AYE+ ++ F T +YG S + I + + T
Sbjct: 113 TVMNTMDDIIAFVEALVEKEAAYESGGDVYFITEKFKDYGKLSDQSIQDLQVGASQRTES 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K+NP DF LWK + P E W+SPWG+GRPGWHIECS M++ +LG DIHGGG D
Sbjct: 173 ADDAKKRNPLDFALWKSAKPGEISWDSPWGKGRPGWHIECSVMATKHLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS A W+HN F+ + KMSKS GNF+ +++++
Sbjct: 233 LAFPHHENEIAQSESKTG-HPFARYWMHNAFVTMGEDGEKMSKSLGNFVLVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
+ ++R + HYR P+ F+ L EA +SK T
Sbjct: 287 --KEIDPQILRFFLASAHYRRPLKFSESSLQEATANVSKIQTTFSNTRYRLEQAVESLED 344
Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNAS 388
S ++ + +D N + + L++ +E + L + +
Sbjct: 345 DQDVWASFEALEGKFQEEMDDDFNAANGMTVLYQFVKEWNVYLEREIVSRVILEKLLEKA 404
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ I KE + + I+ L+ ERL K K F+ +D IR+ L+++G +LED
Sbjct: 405 EQLFAIFGMKEVQEELVDDDIQALIDERLEARKAKNFARSDEIRELLKAQGIVLEDT--- 461
Query: 449 DNGQRMTRWKQ 459
+ TRW++
Sbjct: 462 ---AQGTRWRR 469
>gi|322392299|ref|ZP_08065760.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
gi|321144834|gb|EFX40234.1| cysteine--tRNA ligase [Streptococcus peroris ATCC 700780]
Length = 447
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 158/463 (34%), Positives = 234/463 (50%), Gaps = 30/463 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MLKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWNSPWGPGRPGWHIECSVMSTEILGATIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGTVDAGELQAFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
++A+ D NT + I + ++A+ + + A +L + + + IE
Sbjct: 345 FVAAMDEDFNTANGITVVFEMAKWINSGNYDAAVKETLAAML-EVFGVVFVEEVLDEEIE 403
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 404 ALIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|159029961|emb|CAO90340.1| cysS [Microcystis aeruginosa PCC 7806]
Length = 480
Score = 382 bits (981), Expect = e-104, Method: Composition-based stats.
Identities = 164/499 (32%), Positives = 249/499 (49%), Gaps = 62/499 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F + P + MY CG TVYD+ H+G+AR +V+DV+ R L Y
Sbjct: 1 MTLILYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDKI+ RA+ EH + ++ + K Q + +D +L
Sbjct: 61 --KVRYIQNFTDIDDKILNRAKNEHTT------MAAVAEKFIQAYFEDMAKLGVRPADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + L+ + G+AY ++ ++ + +YG S RK+D+ + G +
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVE 172
Query: 183 YHK------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++P DF LWK + P EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 TDDPEAIKKQDPFDFALWKGAKPGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A+ W+HNG + + G KMSKS GNFITI ELL
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTS 343
+ +RL +L YR+PIDF+ + L A + +
Sbjct: 289 ----KYDPLAVRLLILGAQYRKPIDFSDEGLQAATNGWHTLQEGLSFGYKHLPPDNPAIT 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFN 386
++ A+ +D N + L ++A+E K + L
Sbjct: 345 DQELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLV 404
Query: 387 ASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ +LG+E+ + + IE L+Q+R K K ++ +D IR +L+++G
Sbjct: 405 KLSRVLGLEIAADQGETPVSEGISAAEIENLIQQRTEAKKAKNYAESDRIRAELKAQGIT 464
Query: 442 LEDYKNPDNGQRMTRWKQK 460
L D +T+W ++
Sbjct: 465 LIDQPGG-----VTKWLRE 478
>gi|289433593|ref|YP_003463465.1| hypothetical protein lse_0224 [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169837|emb|CBH26375.1| cysS [Listeria seeligeri serovar 1/2b str. SLCC3954]
Length = 471
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 171/487 (35%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MAIQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S + + E + G RV
Sbjct: 113 PRVTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DLIF
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQD 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|23501564|ref|NP_697691.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
gi|161618646|ref|YP_001592533.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|225627175|ref|ZP_03785213.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|254701461|ref|ZP_05163289.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|254704007|ref|ZP_05165835.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|254709799|ref|ZP_05171610.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|254713802|ref|ZP_05175613.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|254717140|ref|ZP_05178951.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|256031289|ref|ZP_05444903.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|256060801|ref|ZP_05450963.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
gi|256159399|ref|ZP_05457181.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|256369113|ref|YP_003106621.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
gi|260168427|ref|ZP_05755238.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
gi|260566743|ref|ZP_05837213.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
gi|261218954|ref|ZP_05933235.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261317337|ref|ZP_05956534.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261321547|ref|ZP_05960744.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261324795|ref|ZP_05963992.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261752004|ref|ZP_05995713.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261754663|ref|ZP_05998372.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261757891|ref|ZP_06001600.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
gi|265988375|ref|ZP_06100932.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|265997841|ref|ZP_06110398.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|294852039|ref|ZP_06792712.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
gi|38258390|sp|Q8G1N5|SYC_BRUSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189082060|sp|A9MA50|SYC_BRUC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|23347476|gb|AAN29606.1| cysteinyl-tRNA synthetase [Brucella suis 1330]
gi|161335457|gb|ABX61762.1| cysteinyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|225618010|gb|EEH15054.1| Cysteinyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|255999273|gb|ACU47672.1| cysteinyl-tRNA synthetase [Brucella microti CCM 4915]
gi|260156261|gb|EEW91341.1| cysteinyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
gi|260924043|gb|EEX90611.1| cysteinyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261294237|gb|EEX97733.1| cysteinyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261296560|gb|EEY00057.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261300775|gb|EEY04272.1| cysteinyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261737875|gb|EEY25871.1| cysteinyl-tRNA synthetase [Brucella sp. F5/99]
gi|261741757|gb|EEY29683.1| cysteinyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261744416|gb|EEY32342.1| cysteinyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|262552309|gb|EEZ08299.1| cysteinyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|264660572|gb|EEZ30833.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|294820628|gb|EFG37627.1| cysteinyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
Length = 506
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 291/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|17987555|ref|NP_540189.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|225852198|ref|YP_002732431.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|256044370|ref|ZP_05447274.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|256113213|ref|ZP_05454081.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|256264294|ref|ZP_05466826.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|260563723|ref|ZP_05834209.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|265990788|ref|ZP_06103345.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|265994624|ref|ZP_06107181.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|38258395|sp|Q8YG89|SYC_BRUME RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765182|sp|C0RI19|SYC_BRUMB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|17983259|gb|AAL52453.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|225640563|gb|ACO00477.1| cysteinyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|260153739|gb|EEW88831.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|262765737|gb|EEZ11526.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|263001572|gb|EEZ14147.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|263094565|gb|EEZ18363.1| cysteinyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|326408697|gb|ADZ65762.1| cysteinyl-tRNA synthetase [Brucella melitensis M28]
gi|326538421|gb|ADZ86636.1| cysteinyl-tRNA synthetase [Brucella melitensis M5-90]
Length = 506
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 291/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|16799348|ref|NP_469616.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
gi|21264012|sp|Q92F36|SYC_LISIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|16412700|emb|CAC95504.1| cysteinyl-tRNA synthetase [Listeria innocua Clip11262]
Length = 471
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 170/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L T
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + A W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|16802285|ref|NP_463770.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|224498915|ref|ZP_03667264.1| cysteinyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
gi|224502466|ref|ZP_03670773.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|254828699|ref|ZP_05233386.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|255028571|ref|ZP_05300522.1| cysteinyl-tRNA synthetase [Listeria monocytogenes LO28]
gi|21264004|sp|Q8YAB1|SYC_LISMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|16409604|emb|CAD00766.1| cysteinyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|258601104|gb|EEW14429.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
Length = 471
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I +I +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|284800534|ref|YP_003412399.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284993720|ref|YP_003415488.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|284056096|gb|ADB67037.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284059187|gb|ADB70126.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 08-5923]
Length = 471
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 251/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I +I +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|303228928|ref|ZP_07315738.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
gi|302516342|gb|EFL58274.1| cysteine--tRNA ligase [Veillonella atypica ACS-134-V-Col7a]
Length = 482
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 167/501 (33%), Positives = 245/501 (48%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E A +I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGV------AWDVIANRYIDSYFEVMDALGVERADV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HIP ++ +I+ +I G+AYE + ++ F +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++G+ N A ++ ++ R + K+++ AD IR +L G
Sbjct: 406 FKFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED RWK++
Sbjct: 466 ITIEDSPTGA------RWKKR 480
>gi|317472691|ref|ZP_07932006.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
gi|316899868|gb|EFV21867.1| cysteinyl-tRNA synthetase [Anaerostipes sp. 3_2_56FAA]
Length = 466
Score = 382 bits (980), Expect = e-104, Method: Composition-based stats.
Identities = 187/483 (38%), Positives = 247/483 (51%), Gaps = 52/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK EF + P + MYVCGPTVY++ HIGNARPMI+FD + R Y +
Sbjct: 1 MKIYNTLTRKKEEFVPVHPGKVGMYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I + ++ KD L THQP+
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVSAT------EIAERYIEECKKDMEGLNVKPATHQPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I +I GHAYE N + F T S YG S++ ID+ + G R V
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK E W SPWG GRPGWHIECS MS Y+G DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + E AN W+HNGFLN++ +KMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEACND-ECFANYWMHNGFLNIDNQKMSKSAGNFFTVREI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
+P VIR ML HYR P++F+ + A+ L +
Sbjct: 285 YPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEEA 344
Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAH 390
+ A+ +D NT A+ A+ +L + + LL
Sbjct: 345 NLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLETMETLCG 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGIE +E + I ++ K K F+ AD IR +L KG IL+D +
Sbjct: 405 VLGIETKQEEDILDEEIERMIEERQ--QARKEKDFARADEIRDELLEKGIILKDTREGVK 462
Query: 451 GQR 453
+R
Sbjct: 463 WKR 465
>gi|330993327|ref|ZP_08317262.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
gi|329759357|gb|EGG75866.1| Cysteinyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
Length = 459
Score = 382 bits (980), Expect = e-103, Method: Composition-based stats.
Identities = 192/468 (41%), Positives = 266/468 (56%), Gaps = 33/468 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ ++++ R F + P N+R+Y CGPTVYD AHIGN R M+ DVL RLLR+ Y
Sbjct: 11 PRLHLHDSRTRSTVPFVPLAPDNVRVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHLY- 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI RA ++I+ +T++ F D ++ L P +
Sbjct: 70 -PRVTYVRNITDVDDKINARAHANG------ESIADLTARTIADFHADLAAVSILPPDVE 122
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+HI +M +I +I GHAYEA ++F + P+YG+ S R D+ G RV
Sbjct: 123 PRATHHIGEMQDMIARLIESGHAYEAEGHVLFAVGTYPSYGALSGRTPDDLIAGARVEVA 182
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS YLG+ FDIHGGG DL+F
Sbjct: 183 PYKRDPGDFVLWKPSDDQTPGWDSPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLLF 242
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS C AN W+HN L + G KMSKS GNF+T+ ++L R
Sbjct: 243 PHHENERAQSMCCHPHGHFANHWVHNAMLLVNGEKMSKSLGNFLTVRDVL-------RDT 295
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV------LSALY 356
PA +RL +L YR ++FT + L EA +L ++ + P V + L
Sbjct: 296 PAEALRLLLLRAQYRSVLNFTREGLDEARQMLDRFYRALEKLDPDQPPVPAPDSVVQVLC 355
Query: 357 NDLNTVSAIQALHKLARES-TKNHDLLPIFNASAHILGIEVCKEHL-----NKNISIAIE 410
+DLNT A+ +H LA + T + A+ +++G+ K IE
Sbjct: 356 DDLNTPRALAEMHALADAALTGDRVAAAQLKAAGNLIGLLNDTPEAWFRGGAKVDPAHIE 415
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+L++ERL K + F+ AD IR L ++G +LED G + T W+
Sbjct: 416 RLIEERLAARKARDFARADEIRNTLAAQGIVLED------GPQGTTWR 457
>gi|254718815|ref|ZP_05180626.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
gi|265983799|ref|ZP_06096534.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
gi|306837536|ref|ZP_07470411.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
gi|264662391|gb|EEZ32652.1| cysteinyl-tRNA synthetase [Brucella sp. 83/13]
gi|306407428|gb|EFM63632.1| cysteinyl-tRNA synthetase [Brucella sp. NF 2653]
Length = 506
Score = 382 bits (980), Expect = e-103, Method: Composition-based stats.
Identities = 221/502 (44%), Positives = 290/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVAALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHAGAVAAALCDDLNSWAAITAL----RQAFKARDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LREGVQLKDSKDPATGERITTW 502
>gi|300811849|ref|ZP_07092315.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
gi|300497168|gb|EFK32224.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. bulgaricus
PB2003/044-T3-4]
Length = 474
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 167/496 (33%), Positives = 247/496 (49%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEARAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYE + ++ + +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYETDGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKVADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR ID++ + L +A +L ++ T
Sbjct: 287 --KTVDPQVLRFFMASVQYRSQIDYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K + IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|332076428|gb|EGI86891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
Length = 447
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ +G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFATADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|282850303|ref|ZP_06259682.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294793811|ref|ZP_06758948.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
gi|282579796|gb|EFB85200.1| cysteine--tRNA ligase [Veillonella parvula ATCC 17745]
gi|294455381|gb|EFG23753.1| cysteine--tRNA ligase [Veillonella sp. 3_1_44]
Length = 482
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 166/501 (33%), Positives = 240/501 (47%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E S I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGVS------WDTIANRYIDSYFEVMDALGVQRADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HI +I +IQ +I G+AYE + ++ + +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++G+ N ++ ++ R + K+++ AD IR +L G
Sbjct: 406 FKFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED + RWK++
Sbjct: 466 ITIEDS------PQGARWKKR 480
>gi|313620930|gb|EFR92103.1| cysteinyl-tRNA synthetase [Listeria innocua FSL S4-378]
Length = 471
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + A W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKDIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|317495866|ref|ZP_07954229.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
gi|316914043|gb|EFV35526.1| cysteinyl-tRNA synthetase [Gemella moribillum M424]
Length = 465
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 181/488 (37%), Positives = 260/488 (53%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL ++ + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L + E
Sbjct: 1 MIKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++ N TD+DDKII+ + +E S S +T K F KD L C T P
Sbjct: 61 --VDFISNFTDVDDKIIKASNEEGIST------SELTDKYIAAFFKDYDALGCKRATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T ++ ++I I +I G AYE+N ++ F T +YG S++ ID+ G R+
Sbjct: 113 RVTEYMQEIIDFIAKLIEEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++P DF LWK++ P E W SP+G GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 HKEDPLDFALWKKAKPGEVKWASPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS C +N W+HN F+N++ KMSKS GNF + +++
Sbjct: 233 HHENEIAQSEC-HNHAPFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIS-------EID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIID----- 348
V+RL ML HYR PI++T++ + A+ K + + +D
Sbjct: 285 PMVLRLFMLTVHYRTPINYTLENIELAKTNFEKLKTSYQNLEFRLNNEMTVEKLDDEVVA 344
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----I 391
+ +D NT +A+ + +++ R + N + L + A+ I
Sbjct: 345 LASSELEKFEEYMQDDFNTANALSSWYEVVRITNSYTAQNEVNKETLELLKAAFDTYSSI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI V + N IEKL++ER K + F+ AD IR L+ +G ILED K
Sbjct: 405 LGINVKDD--NSLEDSHIEKLIEERENARKNRDFALADKIRDDLKEQGIILEDTK----- 457
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 458 -QGVRWKK 464
>gi|257871414|ref|ZP_05651067.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
gi|257805578|gb|EEV34400.1| cysteinyl-tRNA synthetase [Enterococcus gallinarum EG2]
Length = 469
Score = 381 bits (979), Expect = e-103, Method: Composition-based stats.
Identities = 177/492 (35%), Positives = 249/492 (50%), Gaps = 61/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL RK FQ ++ ++MYVCGPTVY++ H+GN R ++ FD + R L Y E
Sbjct: 1 MIKIYNTLTRKKEVFQPLEQGRVKMYVCGPTVYNYIHVGNGRSVVSFDTIRRYLEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII A++ S P I + + F KDT L T P
Sbjct: 61 --VDYVMNFTDVDDKIIRTAKELKTSAP------EIADRFIEAFNKDTAALNVQPATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +HI +I IQ ++ G+AY ANN++ + T +YG S + IDE ++G
Sbjct: 113 RVMDHIEDIIAFIQVLVDKGYAYMANNDVYYRTRKFKHYGQLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K DF LWK + E W+SPWG GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQKIKEDPLDFALWKAAKENEIAWDSPWGLGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + AN W+HNG++ + E KMSKS GNF+T++E++
Sbjct: 233 TFPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEEEEKMSKSLGNFVTVHEMV------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+ V+R + T YR PI ++ L EAE L K
Sbjct: 286 -QKIDPQVLRFFLATTQYRRPIKYSETTLKEAETNLQKLRTALENAQFRLQNSKEGFPEG 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
+ + + +D N + I +++LA+ + I F
Sbjct: 345 TDHAILAEFEQRFVQEMDDDFNAANGITVVYELAKWLNTYSESASIDIELLTAAVEKFKE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI E L + IE+L++ER+ + + F+ +D IR L+ KG ILED
Sbjct: 405 WLAIFGIYFVGEEL---LDEEIEQLIEERIQARQARDFARSDEIRDVLKEKGIILEDT-- 459
Query: 448 PDNGQRMTRWKQ 459
+ TRW++
Sbjct: 460 ----AQGTRWRR 467
>gi|15606347|ref|NP_213726.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6831683|sp|O67163|SYC_AQUAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|2983551|gb|AAC07125.1| cysteinyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 495
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 173/514 (33%), Positives = 249/514 (48%), Gaps = 78/514 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL K+ EF I+P + +Y CG TVYD +H+G+ R +IVFDV R L +
Sbjct: 1 MSLRIYNTLSGKVEEFVPINPPKVLIYTCGVTVYDDSHVGHGRSLIVFDVFRRFLEHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN TD+DDKII RA+QE I + ++ D + +
Sbjct: 61 Q--VKFVRNFTDVDDKIINRAKQECTD------FMTIADRYIARYYVDMENIRVRPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP++I +IQ ++ G+AY ++ F +YG S+R I+E G RV
Sbjct: 113 PRVTEHIPEIIEVIQKLVEKGYAYVVEGDVYFSVKKFKDYGKLSKRDIEELIAGARVEPS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S EP W+SPWG+GRPGWH EC AM +LG+ DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECVAMVFKHLGETIDIHGGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HNG + + G+KMSKS GN++T+ E+ +
Sbjct: 233 PHHENEIAQAEAITG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLREVYT-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+RL +L THYR P+DF+ +++ E +
Sbjct: 285 HPDVLRLLVLFTHYRSPLDFSWEKMEETLKAYERLKNAIEDLELLKKLQVVESKEGGTHP 344
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
+ ++L +D NT A+ ++KL E K +
Sbjct: 345 LYEQVKEFEENFYASLSDDFNTPEALSHVYKLVGELNKVKNKAYSEGKITDRELSAYEFA 404
Query: 383 --PIFNASAHILGI--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
+ N I G+ E E I+ L++ R I K K F
Sbjct: 405 SKSLLNTMKKIFGLLEDLYPECKVERVVERELEAGQVFDEKLIQILIEARNIARKEKVFK 464
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
ADYIR +L+ G +LED T+WK++
Sbjct: 465 VADYIRDKLKELGIVLEDT------PAGTKWKKR 492
>gi|329769070|ref|ZP_08260492.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
gi|328839561|gb|EGF89137.1| cysteinyl-tRNA synthetase [Gemella sanguinis M325]
Length = 465
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 180/489 (36%), Positives = 266/489 (54%), Gaps = 56/489 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL ++ + I+ + ++MYVCGPTVY++ HIGNARP+IVFDV+ + L + E
Sbjct: 1 MIKLYNTLTKQKEILKTIEENKVKMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++ N TD+DDKII+ + +E S +T+K + F KD L C T P
Sbjct: 61 --VDFISNFTDVDDKIIKASNEEGISTT------ELTNKYIEAFFKDYDALGCARATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T ++ ++I I +++ G AYE+N ++ F T +YG S++ ID+ G R+
Sbjct: 113 RVTEYMQEIIDFIADLVKEGFAYESNGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++P DF LWK++ P E W+SP+G GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 HKEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS C +N W+HN F+N++ KMSKS GNF + +++
Sbjct: 233 HHENEIAQSEC-HNHAPFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIID----- 348
V+RL ML HYR PI++T++ + A K + + ++D
Sbjct: 285 PMVLRLFMLTVHYRTPINYTLENIELATTNYEKLKTAYQNLQFRLNNETTEEVLDKEVVN 344
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----I 391
+ +D NT +A+ + ++L R S N + L + NA+ I
Sbjct: 345 AVTQELEKFEEYMQDDFNTANALSSWYELVRISNSYTSKETVNKETLELLNAAFETYSSI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI V ++ NK IE L+ ER K + F+ AD IR L+ +G +LED K
Sbjct: 405 LGINVKED--NKLDDSYIENLIAEREQARKDRNFALADKIRDDLKEQGIVLEDTK----- 457
Query: 452 QRMTRWKQK 460
+ RWK++
Sbjct: 458 -QGVRWKKQ 465
>gi|254688949|ref|ZP_05152203.1| cysteinyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260754439|ref|ZP_05866787.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
gi|260674547|gb|EEX61368.1| cysteine-tRNA ligase [Brucella abortus bv. 6 str. 870]
Length = 506
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 222/502 (44%), Positives = 291/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDHWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ +V + AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTVSDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|126654401|ref|ZP_01726146.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
gi|126589151|gb|EAZ83335.1| cysteinyl-tRNA synthetase [Bacillus sp. B14905]
Length = 466
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 171/489 (34%), Positives = 251/489 (51%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+N+L R+ F ++ ++MYVCGPTVY++ HIGN+RP+IV+D + R +Y
Sbjct: 1 MSIQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDKII+ A + + + + +T + + +D T L C
Sbjct: 61 D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I IQ +I G+AYE+ ++ + T YG S + +D+ K+G R+
Sbjct: 113 PRVTEHMTDIIQFIQILIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K + DF LWK + P E WESPWG GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNG++N++ KMSKS GNFI +N++ +
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDI-------RKQI 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+R ML HYR PI+F + A L + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINFAKDLVEAAAAGLERIRTAYNNVKHRLTTTVSLGDHSDEWL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
A+ +D NT + I L +LAR + + + F
Sbjct: 345 NKITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI+ KE + I L+QER+ K + F+ +D IR L+++G ILED +
Sbjct: 405 VLGIKFAKEEELLDEEID--ALLQERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 459 --QGTRWKR 465
>gi|90021548|ref|YP_527375.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
gi|109894935|sp|Q21JG6|SYC_SACD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|89951148|gb|ABD81163.1| cysteinyl-tRNA synthetase [Saccharophagus degradans 2-40]
Length = 459
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 189/479 (39%), Positives = 264/479 (55%), Gaps = 43/479 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNT RK F ++P +I+MYVCGPTVY+ HIGNARP++VFDVL+R+L+ Y
Sbjct: 1 MSLTVYNTRTRKKEPFVPVNPQSIKMYVCGPTVYNLVHIGNARPVVVFDVLFRVLKTLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI++ A++ ++IS +T++ T+ +++D L L P+
Sbjct: 60 -PEVVYARNITDIDDKIMKAAKENG------ESISALTARFTEAYIEDMAALHNLPPSIA 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI MI ++ ++ GHAYEA+ ++FD S+ NYG S R +++ G RV
Sbjct: 113 PKATAHIEPMIAMVAALVEKGHAYEADGHVLFDVQSMKNYGKLSNRALEDMLDGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+ DF+LWK S EPGW SPWGRGRPGWH+ECSAM +LG DIHGGG DLIF
Sbjct: 173 DYKRYAGDFVLWKPSADDEPGWASPWGRGRPGWHLECSAMIETHLGNTIDIHGGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA E+ W+HNG++N++G KMSKS GNF T+ +LL + +
Sbjct: 233 PHHENELAQSECAHGGEEYVRYWMHNGYVNIDGEKMSKSLGNFRTVRDLL-------QQY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN----- 357
IR A+L YR +DF+V L +++ L + + N
Sbjct: 286 HGETIRFALLSAQYRSELDFSVSLLDQSKAGLDTLYGALKNAPATSTDAVDLSDNAGYLA 345
Query: 358 ---DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG--------------IEVCKEH 400
DLNT I LH+LA+ KN A+ +
Sbjct: 346 LLDDLNTPQVIAELHRLAKIVNKNEGQEAAIAAAQLQALGGLLGLLQQEPEAWFKATTSG 405
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ + IE+L+ ER K ++ AD IRK+L KG LED T WK+
Sbjct: 406 SSELSAEDIEQLIVERKDAKLAKNYARADEIRKELTEKGIALEDS------ASGTSWKR 458
>gi|114327800|ref|YP_744957.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
gi|122327235|sp|Q0BT18|SYC_GRABC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|114315974|gb|ABI62034.1| cysteinyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
Length = 470
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 200/468 (42%), Positives = 259/468 (55%), Gaps = 36/468 (7%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ F+ IDP ++++YVCGPTVYD AHIGNAR M+VFDVL R+LR Y V
Sbjct: 22 LYNSATHGREPFRPIDPKHVKIYVCGPTVYDLAHIGNARSMVVFDVLARVLRRLY--PRV 79
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TY RNITD+DDKI RAR+ S I IT++ T F D L L P +PRAT
Sbjct: 80 TYARNITDVDDKINARARESGVS------IDEITARTTADFHADMASLGNLPPDIEPRAT 133
Query: 127 NHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
HI +MI LI+ +I HAYE + ++F +S P+YGS S R DE G R+
Sbjct: 134 AHIAEMILLIEKLIAQEHAYETHGEGEGHVLFSVASDPSYGSLSNRSPDELLAGARIDPA 193
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK+P DF+LWK S +PGW+SPWGRGRPGWHIECSAMS YLG+ FDIHGGG DLIF
Sbjct: 194 PYKKDPGDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSWRYLGEDFDIHGGGGDLIF 253
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS CA A+ W+H+ L L+G KMSKS GN +T+ +LL
Sbjct: 254 PHHENECAQSRCAFPGSHFAHYWMHSAMLLLDGEKMSKSLGNVLTVRDLLGQA------- 306
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------STSKGIIDPAVLSAL 355
IRL L THYR +DF + L EA L ++ + ++ VL AL
Sbjct: 307 DGEAIRLLFLKTHYRGVLDFRYEALKEAGKELDRFYRALQAHPALPDLDETVENPVLEAL 366
Query: 356 YNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGI---EVCKEHLNKNISIAIEK 411
+DLNT A+ +H LA + ++G+ E I +
Sbjct: 367 RDDLNTPQALSLMHGLAYAALGGDALAAAQLKEGGMLMGLFTREAEAWFQRGINPDEIAQ 426
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ +RL K + F+ AD IR +L G +LED G T W++
Sbjct: 427 RIADRLQARKDRNFAEADRIRNELAEAGILLED------GPSGTTWRR 468
>gi|313639766|gb|EFS04515.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
Length = 471
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 171/487 (35%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MAIQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S + + E + G RV
Sbjct: 113 PRVTENMDEIIQLITTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DLIF
Sbjct: 173 ERKQDELDFTLWKAAKPDEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQD 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLEYTQTESLADSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|313625379|gb|EFR95169.1| cysteinyl-tRNA synthetase [Listeria innocua FSL J1-023]
Length = 471
Score = 381 bits (978), Expect = e-103, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 249/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L T
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + A W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFAKYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEETHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLSKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ + +E L++ RL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGLKLENTQTDSLDDSEVEALIEARLQARNERNFARADEIRDILKEKDIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|303231487|ref|ZP_07318217.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
gi|302513830|gb|EFL55842.1| cysteine--tRNA ligase [Veillonella atypica ACS-049-V-Sch6]
Length = 482
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 167/501 (33%), Positives = 245/501 (48%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFTPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E A +I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGV------AWDVIANRYIDSYFEVMDALGVERADV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HIP ++ +I+ +I G+AYE + ++ F +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIPDILKMIETLIDKGYAYELDGDVYFSVEKFDHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG+ FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSQKYLGEEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGHHPSVKYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLGTAIENLLYLEKCEAGPCDDAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQVVTGREGVVCQDAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLNKNISIA-----IEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++G+ N A ++ ++ R + K+++ AD IR +L G
Sbjct: 406 FKFMTEVIGVLEKAWEGNTGADAAEYEQLMDVILSVRQACREQKQWALADCIRDRLAEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED RWK++
Sbjct: 466 ITIEDS------PAGARWKKR 480
>gi|254831936|ref|ZP_05236591.1| cysteinyl-tRNA synthetase [Listeria monocytogenes 10403S]
Length = 471
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 250/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I +I +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+F
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHED 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG ++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 405 FAEVLGFKLENTQSDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQ 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFRRG 471
>gi|160872079|ref|ZP_02062211.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
gi|159120878|gb|EDP46216.1| cysteinyl-tRNA synthetase [Rickettsiella grylli]
Length = 466
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 260/488 (53%), Gaps = 53/488 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL +K F+ + + MYVCG TVYDF HIG+AR ++VFDV+ R L+ +
Sbjct: 1 MLKIYNTLTQKKEAFKPMIAKKVGMYVCGMTVYDFCHIGHARVVVVFDVILRYLKMQGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+RNITDIDDKII+RA++ N++ +T + + +D RL L P +P
Sbjct: 61 --VNYIRNITDIDDKIIKRAQEN------NESPFELTQRMIKAMHEDFNRLNTLPPNAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT+ I +I LIQ ++ +AY N +I FD YG + + + + + G RV
Sbjct: 113 KATDAIVYIIALIQRLVDKAYAYRSENGDICFDVKKFKTYGDLAHQNVQKLRRGLRVAVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK++ EP WESPWG GRPGWHIECSAMS LG+ FDIHGGGLDL+F
Sbjct: 173 ITKKDPLDFVLWKKAKSGEPSWESPWGPGRPGWHIECSAMSMAALGEHFDIHGGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHH+NEIAQS +K N WIH GF+ ++ +KMSKS GNF T+ ++L + +
Sbjct: 233 PHHQNEIAQSEGVTD-KKFVNTWIHVGFVQIDRQKMSKSLGNFFTLRDVL-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------GIID 348
PA V+R ++ +HYR PI ++++ L A+ L + +
Sbjct: 285 PAEVVRYFLISSHYRSPIQYSLENLQAAQAALQRLYTSLRGLVGKGPQKFVLEESSKEYQ 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-- 398
A+ +D NT A+ L +LAR + + A +LGI +
Sbjct: 345 EKFEHAMNDDFNTPDALAILFELARRINRLRETNSKHAQRDANCLQYLASLLGILQQEPE 404
Query: 399 ------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ I L+ R K + AD IR +L + +LED
Sbjct: 405 QFLKLNQEKDPHLVEKINGLMNARNHARAAKNWQEADRIRDELLALNIVLEDTTT----- 459
Query: 453 RMTRWKQK 460
T+W++K
Sbjct: 460 -GTQWRRK 466
>gi|170767865|ref|ZP_02902318.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
gi|170123353|gb|EDS92284.1| cysteinyl tRNA synthetase [Escherichia albertii TW07627]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVERMIAEMHKDFDALNIQRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLASVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|313124319|ref|YP_004034578.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|312280882|gb|ADQ61601.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
Length = 474
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 168/496 (33%), Positives = 248/496 (50%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEARAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYEA+ ++ + +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR I+++ + L +A +L ++ T
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADATEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K N IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|222152459|ref|YP_002561634.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
gi|222113270|emb|CAR40797.1| cysteinyl-tRNA synthetase [Streptococcus uberis 0140J]
Length = 446
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 159/465 (34%), Positives = 240/465 (51%), Gaps = 35/465 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R++ +F+ I+ + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRQLRDFKPINDNQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + + + F++DT++L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAAAENGVT------PKELADRFIAAFMEDTSKLGIKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I I ++ G AY+ ++ F + NY + + + + ++G
Sbjct: 113 RVMDYMDEIIAFISVLMEKGFAYQVAGDVYFRVAKSENYARLANKTLADLEVGASGRTDS 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDLKENPLDFALWKSAKSGEISWESPWGPGRPGWHIECSVMATELLGHTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-HTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAV 351
+ V+R + YR+PI+FT + + +AE+ L T A
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTYRLPVAETSDLGYKTYIEAF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISIA 408
+A+ +D N + I + A+ H ++ F + GI +E +
Sbjct: 345 KAAMDDDFNAANGITVVFDFAKWINSGHYSAEIKTAFEEMLAVFGIVFEEE----VLDAD 400
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER + F+ AD IR QL S+G L D K+ R
Sbjct: 401 IEALIAERQEARAQRDFAKADQIRDQLASQGIKLLDTKDGVRWTR 445
>gi|56478148|ref|YP_159737.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
gi|61216130|sp|Q5P1H8|SYC_AZOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56314191|emb|CAI08836.1| cysteinyl-tRNA synthetase [Aromatoleum aromaticum EbN1]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 185/483 (38%), Positives = 254/483 (52%), Gaps = 50/483 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL R+ F I P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR E
Sbjct: 1 MLHIHNTLTRRKEAFVPIAPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RA ++ ++I +T + +D L L P H+P
Sbjct: 61 L--TYVRNITDIDDKIIRRAGEKG------ESIRTLTDRFIAAMHEDADALGVLRPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ QM LI + G AY A N ++ + +YG FS + +DE + G RV
Sbjct: 113 RATEYVMQMQSLIGRLRDKGLAYVAGNRDVCYSVRKFDSYGRFSGKSLDELRAGERVEVA 172
Query: 183 YHKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK P E W SPWG GRPGWHIECSAMSS LG+ FDIHGGG D
Sbjct: 173 GDKQDPLDFVLWKHARTDEPDEVKWASPWGAGRPGWHIECSAMSSDLLGEQFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI ++LE
Sbjct: 233 LQFPHHENEIAQSEGAHG-HTFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLER----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
+ V+R +L HYR P++++ L +A L++
Sbjct: 287 --FDPEVVRFFILRAHYRSPLNYSDAHLEDARQALTRLYTALRNVQPSDAQVDWDEPHAM 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-------------AHILGIEV 396
+A+ +D NT A+ L +LA E+ ++ A L +
Sbjct: 345 RFRAAMDDDFNTAEAVAVLFELANEANRSGSAATAAQLKGLGGVLGLLAREPASFLQGRM 404
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
E +K +AIE +++ R + K K ++ AD IR QL + G +LED T
Sbjct: 405 AGEP-DKGEGVAIESMIERRALAKKSKDYAEADRIRAQLLASGIVLEDT------PHGTV 457
Query: 457 WKQ 459
W++
Sbjct: 458 WRR 460
>gi|134298071|ref|YP_001111567.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|187629810|sp|A4J0Y9|SYC_DESRM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|134050771|gb|ABO48742.1| cysteinyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 486
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 177/507 (34%), Positives = 242/507 (47%), Gaps = 73/507 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R EF D ++ MYVCGPT Y+F H+GNARP++ FD + R Y
Sbjct: 1 MQIYNTLARAKEEFIPRDKGHVSMYVCGPTTYNFIHLGNARPLVFFDTVRRYFLYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TD+DDKII RA +E + K Q+F D L + P+
Sbjct: 59 KVDYVQNFTDVDDKIINRAAEEKID------PLELAQKYIQEFFVDADALNVMRADTHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ HI ++I LI+ + GHAY + ++ F S YG S R +++ + G RV
Sbjct: 113 VSEHIEEIIDLIKRLEDQGHAYVVDGDVYFAVRSFAEYGKLSGRSLEDMQAGARVEVDPR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM+ YLG FDIHGGG DLIFPH
Sbjct: 173 KKDPMDFALWKAAKPGEPSWDSPWGSGRPGWHIECSAMAEKYLGNGFDIHGGGFDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + A W+HNGF+ + KMSKS GNF + E+L +P
Sbjct: 233 HENEIAQSEAACKA-PFARYWMHNGFITINQEKMSKSLGNFFLVREILA-------KFPP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
V+R +L THYR P+DF ++L + L +
Sbjct: 285 DVVRWYLLSTHYRSPLDFDDEKLVMSGKGLERIKTALRLLYEAMDLPVYEGEDIQGAENF 344
Query: 350 ---------AVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PI 384
A+ +D NT AI LA+E L +
Sbjct: 345 EETLQRIRLEFEKAMDDDFNTALAISYFFDLAKEVNIYVGKLNSKVTLEMRKILDQAHTL 404
Query: 385 FNASAHILGIEVCKEHLNKNI-----------SIAIEKLVQERLILLKMKKFSSADYIRK 433
+LGI + K + ++ +++ R K +S+AD IR
Sbjct: 405 IKDFNRVLGILKEDKMTGKLLIEMAGADDTLTEGLVQLIIKIRQEARSKKDWSTADAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
L+ G +LED + RWK++
Sbjct: 465 GLKELGVVLEDT------PQGVRWKKQ 485
>gi|325685668|gb|EGD27750.1| cysteine--tRNA ligase [Lactobacillus delbrueckii subsp. lactis DSM
20072]
Length = 474
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 168/496 (33%), Positives = 248/496 (50%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEARAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYEA+ ++ + +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR I+++ + L +A +L ++ T
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSKENLEQAANILGRFKNTLEGINYRLADETEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K N IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGNDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|299533876|ref|ZP_07047243.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
gi|298718160|gb|EFI59150.1| cysteinyl-tRNA synthetase [Comamonas testosteroni S44]
Length = 461
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 178/478 (37%), Positives = 250/478 (52%), Gaps = 44/478 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F ++P ++RMYVCG TVYD H+G+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + + I +T + +D L PT +
Sbjct: 61 --KVTYVRNITDIDDKIIKRAVENG------ETIRSLTDRMIDALHQDADALGIERPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+A N ++ + P YG S + +DE G RV
Sbjct: 113 PRATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + EP W+SP+G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 ADGKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A IR ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQIDWSNPYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEH------ 400
+A+ D T A+ L +LA E K+ ++ + A LG+ +
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKFLQAG 404
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ AIE + R K ++ AD IRK+L +G +L+D T W+
Sbjct: 405 AEGVDAAAIEAQIAARAEAKATKNWAEADRIRKELLDQGIVLKDS------AAGTTWE 456
>gi|257875920|ref|ZP_05655573.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
gi|257810086|gb|EEV38906.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC20]
Length = 470
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 168/494 (34%), Positives = 245/494 (49%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ FQ ++ ++MYVCGPTVY++ HIGN R + FD + R Y
Sbjct: 1 MIKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII A++ + P + + F +DT L T P
Sbjct: 60 -TVDYLMNFTDVDDKIIRAAKELGTTAP------EVAERFINAFNEDTAALNVKPATMNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +HI +I I ++ G+AY N ++ + T +YG S + IDE ++G
Sbjct: 113 RVMDHIEDIIAFIAALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRTGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K DF LWK + E WESPWG GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + AN W+HNG++ + + KMSKS GNF+T++E++
Sbjct: 233 TFPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
+ V+R + T YR PI ++ L EA+ L K T +
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344
Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ + + +D N + I +++LA+ + F+
Sbjct: 345 EVNAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L+ ER+ K K F+ +D IR +L+ +G ILED
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|315221317|ref|ZP_07863240.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
gi|315189676|gb|EFU23368.1| cysteinyl-tRNA synthetase [Streptococcus anginosus F0211]
Length = 447
Score = 380 bits (977), Expect = e-103, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 233/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ ++MYVCGPTVY++ H+GNAR FD + R Y E
Sbjct: 1 MIKIYDTMTRSLRKFVPLEEGKVKMYVCGPTVYNYIHVGNARSTAAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVQPATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ +I +Q ++ G AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVVDYMTDIIDFVQVLVDKGFAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK P E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAVKPGEIFWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
+ V+R +YR+PI+FT + + +AE+ L T
Sbjct: 285 TIDGQVLRFFFATQYYRKPINFTEKAVHDAEVNLKYLKNTYEQPFTGTVDLTELQAFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I + +LA+ H ++ F + GI E +
Sbjct: 345 FTAAMDEDFNAANGITVVFELAKWINSGHYSQEVKTAFAELLQVFGIVFTAE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR +L +KG L D K+ R
Sbjct: 401 DIEALIEQRQAARVAKDFATADKIRDELAAKGIKLLDTKDGVRWIR 446
>gi|55820186|ref|YP_138628.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55822074|ref|YP_140515.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|61216120|sp|Q5M1W6|SYC_STRT1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216121|sp|Q5M6F6|SYC_STRT2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|55736171|gb|AAV59813.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55738059|gb|AAV61700.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
Length = 447
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 242/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEVGIST------KELSDKFITAFMEDTAQLGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + +I G AY + ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R + YR+PI+FT + + +AE+ L T + A
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKILQVFGIVFEEET----LDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D K R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRWTR 446
>gi|104774470|ref|YP_619450.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|123077205|sp|Q1G8Z0|SYC_LACDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|103423551|emb|CAI98469.1| Cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 474
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 247/496 (49%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I A E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEAGAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYEA+ ++ + T +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRTKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS N +T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNCVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR I+++ + L +A +L ++ T
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K + IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|148560736|ref|YP_001258660.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
gi|187629796|sp|A5VPL3|SYC_BRUO2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148371993|gb|ABQ61972.1| cysteinyl-tRNA synthetase [Brucella ovis ATCC 25840]
Length = 506
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 220/502 (43%), Positives = 287/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNTLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++ D P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMDARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+ G+R+T W
Sbjct: 481 LQEGVQLKDSKDSATGERITTW 502
>gi|257092145|ref|YP_003165786.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257044669|gb|ACV33857.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 457
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 184/479 (38%), Positives = 254/479 (53%), Gaps = 46/479 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R +F I P ++RMYVCG TVYD H+G+AR ++VFD++ R LR
Sbjct: 1 MLKIYNSLTRAKQDFVPITPGSVRMYVCGMTVYDHCHLGHARVLVVFDLVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + ++I +T++ D L P H+P
Sbjct: 59 LRVTYVRNITDIDDKIIKRALENK------ESIGDLTNRFIAFMNDDAAALGVEKPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++PQM+ LI + +G AY+ + ++ F P YG S + +D+ + G RV
Sbjct: 113 RATEYVPQMLELIGRLEKNGLAYQVPDGDVNFSVRKFPGYGKLSGKALDDLRAGERVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + EP W SPWG GRPGWHIECSAMSS LG+ FDIHGGG DL F
Sbjct: 173 GTKEDPLDFVLWKHAREGEPSWPSPWGDGRPGWHIECSAMSSVLLGEHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + + N W+HNGF+ ++ KMSKS GNF TI E+L R +
Sbjct: 233 PHHENEIAQSEGAHQC-RFVNYWMHNGFVRVDDEKMSKSLGNFCTIKEIL-------RKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------AVL 352
V+R +L HYR P++++ L +A LS+ + P
Sbjct: 285 DPEVLRFFILRAHYRSPLNYSDTHLDDARQALSRLYTALRTANTDPPSIDWDEPHALRFR 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA------------HILGIEVCKEH 400
A+ +D NT A L LA E ++ + ++
Sbjct: 345 DAMDDDFNTPEACAVLFDLAAELNRSKSATLAGQLRGLAGLLGLLGRDPQVF-LQAAPSE 403
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + IE L+ ER K +++AD IR L S G +LED G TRW++
Sbjct: 404 GGELTAEQIESLISERAAAKAQKDYTAADRIRADLLSAGVVLED------GASGTRWRR 456
>gi|258509321|ref|YP_003172072.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|257149248|emb|CAR88221.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
gi|259650602|dbj|BAI42764.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus GG]
Length = 468
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 251/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ R+ F+ + P IRMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII A + +A + + F++DTT L T P
Sbjct: 60 -KVTYVSNFTDVDDKIITAAHKTG------EAPLDLAQRFIDAFMEDTTALGIEPATAHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ IP ++ +Q++I G+AY + ++ + +YG S + +DE + G
Sbjct: 113 RASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQ 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E W+SPWG+GRPGWHIECS MS+ LG FDIHGGG D
Sbjct: 173 EELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ W+HNGF+ + + +KMSKS GNFIT++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
++ V+R M T YR PI ++ L A L++ +
Sbjct: 287 --KTVDPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDA 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ ++A+ +D+N + + L LA+ + +DLL ++A
Sbjct: 345 QITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDA 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+ N+ I+ LV+ R + K F+ +D IR QL ++G ILED
Sbjct: 405 WLQIFGVVFTDPT---NLDANIDALVKARDVARAAKDFAKSDEIRDQLAAQGIILEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 460 ----PQGTRWRRK 468
>gi|116627043|ref|YP_819662.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|116100320|gb|ABJ65466.1| cysteinyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|312277506|gb|ADQ62163.1| Cysteinyl-tRNA synthetase, putative [Streptococcus thermophilus
ND03]
Length = 447
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 242/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLTENTVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEVGIST------KELSDKFITAFMEDTAQLGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + +I G AY + ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIIAFVSILIDKGFAYVSEGDVYFRVTKSNNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDRKEDPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R + YR+PI+FT + + +AE+ L T + A
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTEEVSQAELQAYLDA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQAAMDDDFNTANGVTVLFDMAKWINSGNYDETVKNAFEKILQVFGIVFEEET----LDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D K R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRWTR 446
>gi|193214317|ref|YP_001995516.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
gi|193087794|gb|ACF13069.1| cysteinyl-tRNA synthetase [Chloroherpeton thalassium ATCC 35110]
Length = 489
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 169/496 (34%), Positives = 243/496 (48%), Gaps = 60/496 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ ++IYNTL RK F+ + + +YVCGPTVY +H+G+A+ + FDV+ R LR
Sbjct: 8 ISMSLQIYNTLTRKKEIFEPLVDGRVSLYVCGPTVYGHSHLGHAKSYVSFDVVARWLRQL 67
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YV+NITD+ DDKII +A++EH + + F D
Sbjct: 68 GY--KVKYVQNITDVGHLTDDADEGDDKIIAQAKREHID------PMEVAQFYARSFFAD 119
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRK 169
L P P AT HIP+ I LI+ +I HAYE N + FD +S YG S R
Sbjct: 120 MDALGNQRPNISPTATGHIPEQIALIEQLIEKNHAYEVNGNVYFDVASFEGYGKLSGRIN 179
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
+E + G RV + K++PADF LWK++ P W SPWG G PGWHIECSAMS YLG
Sbjct: 180 QEELEAGARVEVRSEKRHPADFALWKKAEPNHLMKWASPWGVGYPGWHIECSAMSMKYLG 239
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ FDIHGGGL+ FPHH+ EIAQS CA + W+HN + + G+KM KS GN I++
Sbjct: 240 ETFDIHGGGLENQFPHHDCEIAQSECATG-KPFVRYWMHNNMVTVNGQKMGKSLGNSISL 298
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-- 346
++ + +P VIR +L +HYR +DF+ + A+ L K +++
Sbjct: 299 KDIF-------KKFPPVVIRFFILQSHYRSTLDFSDAAIEAAQTGLKKLQESAARLNEAQ 351
Query: 347 ----------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIF 385
+ A+ +D N AI L LARE + F
Sbjct: 352 AGKTDLDLAPYEQRFTDAMNDDFNAPMAIAVLFDLAREINSALAADGLSATSLENAKAFF 411
Query: 386 NASAH-ILGIE--------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
A+ +LGI + + + + +++ R K K F++AD IR L
Sbjct: 412 ETYANGVLGILSTAGESDAAGSDKDKERLEGVMALVLELRQAARKNKDFATADKIRDGLT 471
Query: 437 SKGFILEDYKNPDNGQ 452
G ++D K+ +
Sbjct: 472 GIGIEVKDTKDGAIWK 487
>gi|327480668|gb|AEA83978.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri DSM 4166]
Length = 462
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 184/481 (38%), Positives = 256/481 (53%), Gaps = 46/481 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IYNTL + F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+
Sbjct: 1 MMALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYVRNITDIDDKII RA + + + + +D TRL L P
Sbjct: 61 YD--VTYVRNITDIDDKIIRRASENG------EPFQALVERMIAAMHEDETRLNVLRPDV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HI M +IQ +I G AY N ++ + YG SRRKI++ K+G R+
Sbjct: 113 EPRATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+ LG+ FDIHGGG DL
Sbjct: 173 VDEAKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS A + AN W+H G + ++G KMSKS GNF TI E+LE
Sbjct: 233 VFPHHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVL 352
+ V+R ++ +HYR PI+++ L EA+ L ++
Sbjct: 285 KYHPEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFA 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE----- 399
+ + +D N+ A L ++ RE + + L A +LG+ +
Sbjct: 345 AVMDDDFNSPEACAVLFEMIREVNRLRESDLTAAAALAARLKELAGVLGVLQLEPGAFLQ 404
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + +E L+ RL K + +D IR QL + G +LED K T W
Sbjct: 405 AGAAGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGK------GGTTW 458
Query: 458 K 458
+
Sbjct: 459 R 459
>gi|325126288|gb|ADY85618.1| Cys-tRNA synthetase cycrs [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 474
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 247/496 (49%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I A E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEAGAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYEA+ ++ + +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR I+++ + L +A +L ++ T
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PNLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K + IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|322374189|ref|ZP_08048722.1| cysteine--tRNA ligase [Streptococcus sp. C150]
gi|321276894|gb|EFX53966.1| cysteine--tRNA ligase [Streptococcus sp. C150]
Length = 447
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 245/466 (52%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMARSLRDFVPLTENVVNMYVCGPTVYNYIHIGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEAGIST------KELSDKFIAAFMEDTAQLGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + ++ G AY + ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIIAFVSTLVDKGFAYVSEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETARKENPLDFALWKAAKEGEISWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--TSKGIIDPAVL------ 352
+ V+R + YR+PI+FT + + +AE+ L T G +D A L
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTGQVDQAELQTYLDA 344
Query: 353 --SALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQEAMDDDFNTANGVTVLFDMAKWINSGHYDQTVKDAFEKVLQVFGIVFKEE----VLDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D K+ R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|167745717|ref|ZP_02417844.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
gi|167655029|gb|EDR99158.1| hypothetical protein ANACAC_00410 [Anaerostipes caccae DSM 14662]
Length = 466
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 187/483 (38%), Positives = 248/483 (51%), Gaps = 52/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL RK EF + P + +YVCGPTVY++ HIGNARPMI+FD + R Y +
Sbjct: 1 MKIYNTLTRKKEEFVPVHPGKVGIYVCGPTVYNYIHIGNARPMIIFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I + ++ KD L THQP+
Sbjct: 60 -VNYVSNFTDVDDKIIKKANEEGVSAT------EIAERYIEECKKDMEGLNVKPATHQPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I MI +I +I GHAYE N + F T S YG S++ ID+ + G R V
Sbjct: 113 ATEEIDGMIRMIGTLIEKGHAYEVNGTVYFKTRSFDGYGKLSKKNIDDLEAGHRDIKVRG 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF+LWK E W SPWG GRPGWHIECS MS Y+G DIH GG DLI
Sbjct: 173 EEGKQDPLDFVLWKPKKEGEIAWPSPWGEGRPGWHIECSEMSKKYIGDTIDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + E AN W+HNGFLN++ +KMSKS GNF T+ E+
Sbjct: 233 FPHHENEIAQSEACND-ECFANYWMHNGFLNIDNQKMSKSAGNFFTVREI-------SEK 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
+P VIR ML HYR P++F+ + A+ L +
Sbjct: 285 YPLQVIRFFMLSAHYRNPLNFSDTLVESAKNGLDRILTAIDLVRDQADKPETAAGKEEEA 344
Query: 343 ---SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAH 390
+ A+ +D NT A+ A+ +L + + LL I
Sbjct: 345 NLEEARKLVGKFEEAMEDDFNTADAVSAIFELVKLANTTVKESSSDYAAKLLEIMETLCG 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGIE +E + I ++ K K F+ AD IR +L KG IL+D +
Sbjct: 405 VLGIETKQEEDILDEEIERMIEERQ--QARKEKDFARADEIRDELLEKGIILKDTREGVK 462
Query: 451 GQR 453
+R
Sbjct: 463 WKR 465
>gi|312862597|ref|ZP_07722838.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311101857|gb|EFQ60059.1| cysteine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 447
Score = 380 bits (976), Expect = e-103, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 240/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFIPLTENVVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEAGIST------KELSDKFITAFMEDTAQLGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + +I G AY A ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIIAFVSTLIDKGFAYVAEGDVYFRVAKSKNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R + YR+PI+FT + + +AE+ L T A
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEE----VLDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D K R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTKEGVRWTR 446
>gi|169830402|ref|YP_001716384.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|229558630|sp|B1I0T1|SYC_DESAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169637246|gb|ACA58752.1| cysteinyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 478
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 174/499 (34%), Positives = 246/499 (49%), Gaps = 66/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL + F DP + +YVCGPT Y+F H+GNAR ++VFD + R Y
Sbjct: 1 MQIFNTLTGRKETFCPRDPGRVSIYVCGPTTYNFIHLGNARALVVFDTIRRYFLYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++N TD+DDKII R+R+E + +K ++ D L P+
Sbjct: 59 RVLYIQNFTDVDDKIINRSREEGID------PQTLAAKYVDEYFVDADALNVRRADVHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
++HIP++I LI II G AY A ++ F YG S+R +D+ G RV
Sbjct: 113 VSDHIPEIIALITMIIDRGLAYVAGGDVYFAVRKFGGYGRLSKRSLDDLLAGARVEVGEQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + P EP WESPWGRGRPGWHIECSAM+ YLG FDIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKAAKPGEPWWESPWGRGRPGWHIECSAMALKYLGTGFDIHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A E A WIHNGF+ + KMSKS GN + EL R +P
Sbjct: 233 HENEIAQSEGATG-EPFARYWIHNGFITIREEKMSKSLGNVFLVRELT-------RLYPP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------------S 341
+RL +L HYR P+D+ + + + +++
Sbjct: 285 EALRLFLLSNHYRNPLDYDPEAMEASVRAVNRLKTCLGLLRESLDRPAPDGDGGGGNRLE 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASA 389
++ +A+ +D NT A + L E L +F+A
Sbjct: 345 AVLEVLQGRFEAAMDDDFNTALAQAVMFDLTHEVNTYLHQNDRPSRGALQKALDLFDAFN 404
Query: 390 HILGIEVCKE--------HLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+LGI + ++ ++S ++ L+ R + K F++AD IR L + G
Sbjct: 405 RVLGIFPEHKGRIVLEAGAVSGDLSQGLLDLLIALRQDARRNKDFATADRIRDGLRALGI 464
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + RWK+
Sbjct: 465 LLEDT------PQGVRWKK 477
>gi|237730496|ref|ZP_04560977.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
gi|226906035|gb|EEH91953.1| cysteinyl-tRNA synthetase [Citrobacter sp. 30_2]
Length = 461
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 249/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHSDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMAAHLRKLSSVLGLLEQDPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|302879529|ref|YP_003848093.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
gi|302582318|gb|ADL56329.1| cysteinyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
Length = 456
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 177/477 (37%), Positives = 251/477 (52%), Gaps = 43/477 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R EF I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR + +
Sbjct: 1 MLKIYNTLARDKQEFVPIEPNVVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWFKASGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + N++I +T + D L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIRRAAEN------NESIHSLTQRFIDAMHVDADALGVTRPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++P+M+ +I + +G AY+ A+ ++ + YG S + +++ + G RV
Sbjct: 113 RATQYVPEMLEMIAKLEANGLAYQAADGDVNYAVRKFEGYGKLSGKSLEDLRAGERVEVT 172
Query: 183 YHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K +P DF+LWK + E W+S WGRGRPGWHIECSAM S LG+ FDIHGGG D
Sbjct: 173 DAKNDPLDFVLWKHARDDEAEEVKWDSKWGRGRPGWHIECSAMGSKLLGEHFDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 LQFPHHENEIAQSEGAHQC-SYVNYWMHNGFVRVDNEKMSKSLGNFFTIREVL------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIID 348
+ + V+R +L HYR P++++ L +A+ L + +
Sbjct: 285 KQYDPEVVRFFILRAHYRSPLNYSDAHLDDAKKALDRLYTALKSGSASGVRAVDWTEAYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCKE----HLN 402
+A+ +D NT AI L LA + + + D A +LG+
Sbjct: 345 VRFKAAMDDDFNTAEAIAVLFDLANDVNRSQSEDAAAQLKALGAVLGLLERDPTEFLQGA 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ I + R K ++ AD IRK L + G +LED T W++
Sbjct: 405 GSDDAQIVGQIAARNAAKLAKNYAEADRIRKALLADGIVLEDS------AAGTNWRR 455
>gi|283834167|ref|ZP_06353908.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
gi|291070317|gb|EFE08426.1| cysteine--tRNA ligase [Citrobacter youngae ATCC 29220]
Length = 461
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHSDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKGEDMAAANGMASHLRKLSSVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|327393038|dbj|BAK10460.1| cysteinyl-tRNA synthetase CysS [Pantoea ananatis AJ13355]
Length = 461
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 182/483 (37%), Positives = 256/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF I I MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLSRQKEEFTPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + ++I +T++ + D L L P +P
Sbjct: 61 --VNYVRNITDIDDKIIKRANENG------ESIETLTNRMIAEMHSDFDALGILPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP+++ L++ +I GHAY N +++FD S +YG+ SR+ +D+ + G RV
Sbjct: 113 RATRHIPEIVELVEKLIARGHAYVAENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG+GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKADEPSWPSPWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDREKMSKSLNNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR +++ L +A L + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDRNAVAHGGEAFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + L A++LGI + +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKGEDMTAANALAAKLREIANVLGILQQEPEVFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N IE+ V+ R K ++ AD R +L + G I+ED G + + W
Sbjct: 405 SAQGNDEEVAEIERWVKARADARAAKDWAQADVARDKLNALGVIVED------GPQGSSW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|304385485|ref|ZP_07367830.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
gi|304328692|gb|EFL95913.1| cysteine--tRNA ligase [Pediococcus acidilactici DSM 20284]
Length = 472
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 168/493 (34%), Positives = 244/493 (49%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNT+ R F+ + + MYVCGPTVY++ HIGNAR +I FD + R L Y +
Sbjct: 1 MIKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDK+I+ A+ E+ ++P + + F +D L T P
Sbjct: 61 --VRFVSNFTDVDDKMIKAAQAENITVP------ELAERYIAAFKEDVQALNVEPATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +I + ++I +AY + + NYG+ S + IDE + G
Sbjct: 113 RATENITDIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHIND 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E W++PWG+GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETMQKEDPIDFALWKAAKPGEIAWKAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ A W+HNGF+ + + KMSKS GNF+T+++L+
Sbjct: 233 LQFPHHENEIAQSEARTGVQ-FARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------- 341
+ V+R M T YR+PI +T L +A+ L K
Sbjct: 287 --KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTANGAADP 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ ++A+ +D N + I +++ AR + L F
Sbjct: 345 AVDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A I GIE+ IE LV++R + F ++D +R QL+ G ILED
Sbjct: 405 MAAIFGIELAT-ATEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 462 ----PQGTRWRKK 470
>gi|269124972|ref|YP_003298342.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
gi|268309930|gb|ACY96304.1| cysteinyl-tRNA synthetase [Thermomonospora curvata DSM 43183]
Length = 465
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 162/486 (33%), Positives = 241/486 (49%), Gaps = 51/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + F+ + + MYVCG T HIG+ R +++DVL R LR+
Sbjct: 1 MSLHLYDTGTRTVRPFKPLHEGRVGMYVCGATPQAEPHIGHLRSGVIYDVLLRWLRHSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+VRN+TD+DDKII A + + N + F + L CL PT +
Sbjct: 61 E--VTFVRNVTDVDDKIIAAAAERGV------PWFALAEANQRIFTRGYELLGCLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-SFSRRKIDEQKMGTRVPE 181
PRAT H+P+MI LI+ ++ GHAY A ++ FD +S + S ++++ + P
Sbjct: 113 PRATGHVPEMIVLIRRLLEAGHAYTAAGDVYFDVNSWAEHYGELSHQRLEHMRPAGDTPN 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF LWK + P EP WE+PWG GRPGWH+ECS MS+ YLG FDIHGGG+DLI
Sbjct: 173 EDAKRDPRDFALWKGAKPGEPSWETPWGEGRPGWHLECSVMSTKYLGPTFDIHGGGVDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS A A W+HNG L ++G KMSKS GN + + +LLE +
Sbjct: 233 FPHHENERAQSQAAGDG--FARYWLHNGLLTVDGVKMSKSIGNVVLLTDLLEKAR----- 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAV 351
+R + HYR +D+T L EA + + A
Sbjct: 286 --PVEVRYYLASAHYRSLMDYTDGSLAEAVTAYQRIEGFVTRAAELVGAGEPAAELPEAF 343
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
+A+ +DL A+ LH+ R+ L +LG++ E
Sbjct: 344 TAAMNDDLGVPQALAVLHETVRDGNSALASGDRAEVARRLASVRGMMGVLGLDPLAEPWA 403
Query: 403 KN--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ +++R K +++AD IR L + G ++ED +
Sbjct: 404 DDRGSDLRPVVDALVKVALEQRQAARARKDYAAADEIRDSLAAAGIVVEDTPHGP----- 458
Query: 455 TRWKQK 460
RW+ K
Sbjct: 459 -RWELK 463
>gi|78048109|ref|YP_364284.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
gi|109894961|sp|Q3BSH9|SYC_XANC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78036539|emb|CAJ24230.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. vesicatoria
str. 85-10]
Length = 476
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 194/496 (39%), Positives = 261/496 (52%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGW SPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T++EL+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDLAVSMT 345
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNASA 389
I V SAL +DLNT A+ + +A ++ L +
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|257866301|ref|ZP_05645954.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257873183|ref|ZP_05652836.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257800259|gb|EEV29287.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257807347|gb|EEV36169.1| cysteinyl-tRNA synthetase [Enterococcus casseliflavus EC10]
Length = 470
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 168/494 (34%), Positives = 245/494 (49%), Gaps = 62/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL R+ FQ ++ ++MYVCGPTVY++ HIGN R + FD + R Y
Sbjct: 1 MIKIYNTLTREKEVFQPLEEKKVKMYVCGPTVYNYIHIGNGRSTVSFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII A++ + P + + F +DT L T P
Sbjct: 60 -TVDYLMNFTDVDDKIIRAAKELGTTAP------EVAERFINAFNEDTAALNVKPATMNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +HI +I I ++ G+AY N ++ + T +YG S + IDE ++G
Sbjct: 113 RVMDHIEDIIAFIVALVEKGYAYPVNGDVYYRTRKFAHYGQLSDQSIDELEVGASQRIGE 172
Query: 184 HKKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K DF LWK + E WESPWG GRPGWHIECS M++ +LG+ DIHGGG DL
Sbjct: 173 EQKIKEDPLDFALWKAAKGDEIAWESPWGAGRPGWHIECSVMATKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + AN W+HNG++ + + KMSKS GNF+T++E++
Sbjct: 233 TFPHHENEIAQSEAKTG-KTFANYWMHNGYVTIGEDEEKMSKSLGNFVTVHEMV------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
+ V+R + T YR PI ++ L EA+ L K T +
Sbjct: 286 -KKVDPQVLRFFLATTQYRRPIKYSETTLHEAQTNLQKLRTTYENAKFRLNSSHYQASDE 344
Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ + + +D N + I +++LA+ + F+
Sbjct: 345 EINAAVLEEFEERFVKEMDDDFNAANGITVVYELAKWLNLASEDPETDLALLAAGLAKFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L + IE+L+ ER+ K K F+ +D IR +L+ +G ILED
Sbjct: 405 EWLTIFGIYFVSEEL---LDEEIEQLINERIAARKAKDFARSDQIRDELKEQGIILEDT- 460
Query: 447 NPDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 -----PQGTRWRRE 469
>gi|218703810|ref|YP_002411329.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|293403647|ref|ZP_06647738.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298379257|ref|ZP_06989138.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300897246|ref|ZP_07115688.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
gi|226735058|sp|B7N980|SYC_ECOLU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218430907|emb|CAR11781.1| cysteinyl-tRNA synthetase [Escherichia coli UMN026]
gi|291429500|gb|EFF02520.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1412]
gi|298280370|gb|EFI21874.1| cysteinyl-tRNA synthetase [Escherichia coli FVEC1302]
gi|300358974|gb|EFJ74844.1| cysteinyl-tRNA synthetase [Escherichia coli MS 198-1]
Length = 461
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGPGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSSVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|116514575|ref|YP_813481.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274693|sp|Q048S9|SYC_LACDB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116093890|gb|ABJ59043.1| cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 474
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 246/496 (49%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKLFNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I A E ++P + + Q F++DT L T PR
Sbjct: 59 KVNYVSNFTDVDDKMINEAGAEGTTVP------ELAERYIQAFLEDTRALNIEEATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ IP +I IQ +I G+AYEA+ ++ + +YG S + ID+ + G
Sbjct: 113 ATHEIPAIIDFIQTLIDKGYAYEADGDVYYRAKKFADYGHLSDQNIDQLEEGASQHVNDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQGRKEDPIDFALWKGQKAADEIAWDSPWGKGRPGWHIECSVMSTKYLGDTLDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T+ ++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDEEKMSKSLHNFVTVYDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ V+R M YR I+++ + L +A +L ++ T
Sbjct: 287 --KNVDPQVLRFFMASVQYRSQINYSEENLEQAANILGRFKNTLEGINYRLADATEGLPD 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+A+ +D N +A+ A+++ N +
Sbjct: 345 PDLAKLVTETTAKFEAAMDDDFNVQNALTAIYEALPAVNSNANAEKADKESLRLFAKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++V K + IE+LV +R K K ++ +D +R QL+ G +L+D
Sbjct: 405 AWLSVFGLDVDKLLAKEAGDDDAVIEELVAQRTEARKNKDWAKSDELRDQLKEMGVVLKD 464
Query: 445 YKNPDNGQRMTRWKQK 460
+ TRW ++
Sbjct: 465 T------PQGTRWSRE 474
>gi|209527155|ref|ZP_03275668.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|209492404|gb|EDZ92746.1| cysteinyl-tRNA synthetase [Arthrospira maxima CS-328]
Length = 486
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 175/506 (34%), Positives = 250/506 (49%), Gaps = 69/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R+ F ++P ++MY CG TVYD+ H+G+AR +DV+ R L +
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N TDIDDKI+ RA+++ + ++ + + +D RL
Sbjct: 61 E--VNYVQNFTDIDDKILNRAKEQ------ESTMEAVSQRFIDAYFEDLRRLNVRDAKAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HI ++ LI+ + GHAY + ++ ++ P+YG SRR++++ +MG
Sbjct: 113 PRVTDHIKEIHQLIEQLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 183 Y------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM LG+ DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI ELL+
Sbjct: 233 GGDLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
R V+RL +L HYR+P+DFT + + A+
Sbjct: 289 ---RPVDPMVVRLFILQGHYRKPLDFTDEAIASAKNGWETLKDGLLFAEQYGARLGWSAD 345
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------ 383
P + A+ +D NT + L +LA+E + +LL
Sbjct: 346 SSPSKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTPSDRI 405
Query: 384 -----IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A + G+E + IE LV++R K K ++ D IR
Sbjct: 406 YATWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRD 465
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
QL++ G L D + T W++
Sbjct: 466 QLQANGVTLIDRPGGE-----TLWRR 486
>gi|291567546|dbj|BAI89818.1| cysteinyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 486
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 175/506 (34%), Positives = 247/506 (48%), Gaps = 69/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R+ F ++P ++MY CG TVYD+ H+G+AR +DV+ R L +
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N TDIDDKI+ RA++ + + ++ + + +D RL
Sbjct: 61 E--VNYVQNFTDIDDKILNRAKE------HDSTMEEVSQRFIDAYFEDLRRLNVRDANAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HI ++ LI + GHAY + ++ + P+YG SRR++++ +MG
Sbjct: 113 PRVTDHIQEIHQLIDTLTATGHAYAVDGDVYYSVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 183 Y------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM LG+ DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI ELL+
Sbjct: 233 GGDLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
R V+RL +L HYR+P+DFT + + A
Sbjct: 289 ---RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDD 345
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------ 383
P + A+ +D NT + L +LA+E + +LL
Sbjct: 346 SSPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRI 405
Query: 384 -----IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A + G+E + IE LV++R K K ++ D IR
Sbjct: 406 YAIWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRD 465
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
QL++ G L D + T W++
Sbjct: 466 QLQASGVTLIDRPGGE-----TLWRR 486
>gi|270291200|ref|ZP_06197423.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
gi|270280596|gb|EFA26431.1| cysteinyl-tRNA synthetase [Pediococcus acidilactici 7_4]
Length = 472
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 244/493 (49%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNT+ R F+ + + MYVCGPTVY++ HIGNAR +I FD + R L Y +
Sbjct: 1 MIKLYNTMTRSKEVFKPLVDQQVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDK+I+ A+ E+ ++P + + F +D L T P
Sbjct: 61 --VRFVSNFTDVDDKMIKAAQAENITVP------ELAERYIAAFKEDVQALNVEPATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +I + ++I +AY + + NYG+ S + IDE + G
Sbjct: 113 RATENIADIIAFVADLIEKDYAYVVEGNVYYRARRFKNYGALSHQNIDELEQGASQHIND 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E WE+PWG+GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETMQKEDPIDFALWKAAKPGEIAWEAPWGKGRPGWHIECSVMSTKYLGDTFDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ A W+HNGF+ + + KMSKS GNF+T+++L+
Sbjct: 233 LQFPHHENEIAQSEARTGVQ-FARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLI----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------- 341
+ V+R M T YR+PI +T L +A+ L K
Sbjct: 287 --KQVNPQVLRFLMSTTQYRKPIQYTETSLQDAKNNLEKLQNAYVNLNYRLQTADGAADP 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ ++A+ +D N + I +++ AR + L F
Sbjct: 345 AVDQQAAALQADFVAAMDDDFNAQNGITVVYEFARLINVYSEQATVNHEQIARLAKQFAE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A I GIE+ IE LV++R + F ++D +R QL+ G ILED
Sbjct: 405 MAAIFGIELAT-ATEAPADEKIEALVKQRDAARAARDFETSDRLRDQLKEMGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 462 ----PQGTRWRKK 470
>gi|332365783|gb|EGJ43540.1| cysteine--tRNA ligase [Streptococcus sanguinis SK355]
Length = 447
Score = 380 bits (975), Expect = e-103, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 236/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR I FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEGGKVKMYVCGPTVYNYIHVGNARSTIAFDTIRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DD+II RA++E + + K F +D T L T P
Sbjct: 61 --VNYISNFTDVDDRIINRAKEEGIT------PKEVADKYIAAFREDVTALGVKLATQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I +Q ++ G+AYE+ ++ F NY + + + + ++G
Sbjct: 113 RVIDFMEAIIDFVQTLVDKGYAYESEGDVYFRVEKSHNYAKLANKTLADLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNIDDVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R HYR+PI+FT + + +A L T +
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVHDAATNLKYLKNTYEQPFTGQADSAQLQVFLDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D N + I +LA+ + ++ F + GI +E +
Sbjct: 345 FTAAMDEDFNAANGITVAFELAKWINSGNYTAEVKAAFAKLLEVFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE+L++ER + + F++AD IR +L ++G L D K+ R
Sbjct: 401 DIERLIEERQVARANRDFATADRIRDELAAQGIKLLDTKDGVRWTR 446
>gi|325926478|ref|ZP_08187798.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
gi|325543127|gb|EGD14570.1| cysteinyl-tRNA synthetase [Xanthomonas perforans 91-118]
Length = 476
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 194/496 (39%), Positives = 260/496 (52%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVAPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATTHIPQIVAMIEQLIATGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGW SPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWPSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T++EL+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEAESGSDPAVSMT 345
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNASA 389
I V SAL +DLNT A+ + +A ++ L +
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSDLMQSGQASARMIELHAARAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 MALGLLQQDPAAWFSRGTDAGDDARITALVEERSAAKKAKDFARADAIRKQLAEEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|169834403|ref|YP_001694075.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|168996905|gb|ACA37517.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
Length = 457
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 11 MIKIYDTMSRDLREFVPIEDGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 70
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 71 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 123 RVVEFMDDIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 182
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 183 ETARKENPVDFALWKSAKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 243 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 295 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 354
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 355 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 410
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 411 EIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKDGVRWTR 456
>gi|126658705|ref|ZP_01729850.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126619967|gb|EAZ90691.1| cysteinyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 482
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 175/492 (35%), Positives = 249/492 (50%), Gaps = 58/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R++ F + P + MY CG TVYD+ H+G+AR I++D++ R L++
Sbjct: 1 MTLKIYNTQTRRLEPFITLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYV+N TDIDDKI+ RA+QE S+ I+ + + + D L +
Sbjct: 61 E--VTYVQNFTDIDDKILRRAQQEGVSMV------DISERFIEAYFTDIRPLNVMDADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PR T++I + LIQ ++ +AY + ++ F + YG S R +
Sbjct: 113 PRVTDNISGIQQLIQVLLEKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRVA 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P HKK+P+DF LWK + P EP W SPWG GRPGWHIECSAM LG+ DIHGG
Sbjct: 173 MSDPANSHKKHPSDFALWKSAKPEEPAWNSPWGEGRPGWHIECSAMVRGLLGETIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A+ + A W+HNG + + G KMSKS GNF TI ELL
Sbjct: 233 GGDLVFPHHENEIAQSEAANG-KPLAKYWVHNGMVTVNGEKMSKSLGNFTTIRELLN--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------------RLTEAEILLSKWPQT 340
R VIRL +L HYR+P+DFT + R E W +
Sbjct: 289 ---RPLDPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLRFGEKYGNRLGWQKN 345
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
+ +A+ +D N+ + L +LA+ + +LL
Sbjct: 346 QELDSAVIEQFNAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKTPTDSDNLQRQWQ 405
Query: 384 IFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
A ILG+E + ++ I +L+Q+R K+K ++ +D IR+QL+ KG
Sbjct: 406 TLVHLAGILGLEAKPKANLEDTQNFDEAKITRLIQQRNAARKVKDYAQSDRIREQLQQKG 465
Query: 440 FILEDYKNPDNG 451
L D+ N +
Sbjct: 466 ITLIDHPNGETS 477
>gi|315649724|ref|ZP_07902808.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
gi|315274912|gb|EFU38288.1| cysteinyl-tRNA synthetase [Paenibacillus vortex V453]
Length = 468
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 167/490 (34%), Positives = 248/490 (50%), Gaps = 54/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R F A + +++YVCGPTVYD+ HIGNARPMI FDV+
Sbjct: 1 MALQIYNTLTRMKETFVAQESGKVKIYVCGPTVYDYIHIGNARPMIFFDVVRAYFENQGN 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V+YV N TD+DDK+I +A Q ++P + K Q + +D L T
Sbjct: 61 D--VSYVVNFTDVDDKMIRKAEQTGTTVP------EVADKFIQAYYEDLDGLGIPRATLN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+++ +I IQ ++ AYE ++ + T +YG S++ +DE + G R+
Sbjct: 113 PRVTDNMENIIEFIQELVDRDFAYENGGDVFYRTRKFDDYGKLSQQNLDELQFGIRIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK + P E W SPWG GRPGWHIECSAM+ YLG DIHGGG DL F
Sbjct: 173 KRKENPEDFVLWKAAKPGEIYWSSPWGDGRPGWHIECSAMARRYLGDTLDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE E+AQS + AN W+HNG++ + KMSKS GN + + EL E +
Sbjct: 233 PHHECEVAQSEALTG-KPLANYWMHNGYIRINNEKMSKSLGNGVLVKELRE-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+R ML THYR P++++ + + +A+ + + + +
Sbjct: 285 TKEAVRYFMLSTHYRNPLNYSDEVMDQAQNSVERLANAAANIEHRLSTAIGSKDDEVSQE 344
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHI 391
+ + +D NT AI A+ + A E+ + DL + A +
Sbjct: 345 VAGKISAVLGEFHQKMQDDFNTPDAITAMFQWASEANQLLKEASIPAADLHEVLRAFNEM 404
Query: 392 LG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
G + + + IE L+ ER+ K K ++ AD IR +L +G +LED
Sbjct: 405 NGVLRIVNTGTGDLLDEEIEALIAERIEARKNKNWARADEIRDKLADEGIVLEDT----- 459
Query: 451 GQRMTRWKQK 460
+ RW++K
Sbjct: 460 -AQGMRWRRK 468
>gi|296101636|ref|YP_003611782.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
gi|295056095|gb|ADF60833.1| cysteinyl tRNA synthetase [Enterobacter cloacae subsp. cloacae ATCC
13047]
Length = 461
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 174/492 (35%), Positives = 248/492 (50%), Gaps = 66/492 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVSRYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -NLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIVEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++F + P YGS SR+ +D+ + G RV
Sbjct: 113 RATHHIHEIIDITEKLIARGHAYVADNGDVMFSVPTDPTYGSLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LGK FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGKHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHGGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVEAAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------ 399
+ +D NT A L +ARE + L + +LG+ +
Sbjct: 345 VMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANALAAHLRKLSSVLGLLEQEPDAFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILLK---------MKKFSSADYIRKQLESKGFILEDYKNP 448
+ IE L+ RL + R +L G ILED
Sbjct: 405 GAQADDGEVAEIEALINARLEARQAKDWAAADAA---------RNRLTEMGIILED---- 451
Query: 449 DNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 --GPQGTTWRRK 461
>gi|284053526|ref|ZP_06383736.1| cysteinyl-tRNA synthetase [Arthrospira platensis str. Paraca]
Length = 486
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 175/506 (34%), Positives = 248/506 (49%), Gaps = 69/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT R+ F ++P ++MY CG TVYD+ H+G+AR +DV+ R L +
Sbjct: 1 MVLKIYNTQTRQKETFTTLEPGKVKMYCCGVTVYDYCHLGHARSYTTWDVVRRYLEWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N TDIDDKI+ RA++ + + ++ + + +D RL
Sbjct: 61 E--VNYVQNFTDIDDKILNRAKE------HDSTMEEVSQRFIDAYFEDLRRLNVRDANAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HI ++ LI + GHAY + ++ ++ P+YG SRR++++ +MG
Sbjct: 113 PRVTDHIQEIHQLIDTLTATGHAYAVDGDVYYNVGHFPDYGKLSRRQLEDLQMGASGRVA 172
Query: 183 Y------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM LG+ DIHGG
Sbjct: 173 VADPETLKKKNPADFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMVRQLLGETIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A + A W+HNG + + G KMSKS GNF TI ELL+
Sbjct: 233 GGDLVFPHHENEIAQSEAATG-KTLARYWMHNGMVTVGGEKMSKSLGNFTTIRELLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
R V+RL +L HYR+P+DFT + + A
Sbjct: 289 ---RPVDPMVVRLFILQGHYRKPLDFTDEAIASANNGWETLKDGLLFAQQYGAPLGWSDD 345
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------ 383
P + A+ +D NT + L +LA+E + +LL
Sbjct: 346 SSPGKYDTTEDALQRFRVAMDDDFNTPGGLAVLFELAKELRRQGNLLAHEGKTDTQSDRI 405
Query: 384 -----IFNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A + G+E + IE LV++R K K ++ D IR
Sbjct: 406 YAIWKTLVELAGVFGLEAVTQAQPPAATQGISDAEIEDLVKQRQSARKAKNYAEGDRIRD 465
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
QL++ G L D + T W++
Sbjct: 466 QLQASGVTLIDRPGGE-----TLWRR 486
>gi|301793788|emb|CBW36177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV104]
gi|332204613|gb|EGJ18678.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
Length = 447
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 233/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++ +I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEGLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|16759512|ref|NP_455129.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. CT18]
gi|29142716|ref|NP_806058.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56414312|ref|YP_151387.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161615258|ref|YP_001589223.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi B str. SPB7]
gi|168239036|ref|ZP_02664094.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|168240371|ref|ZP_02665303.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|168465640|ref|ZP_02699522.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|194442819|ref|YP_002039781.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194451708|ref|YP_002044570.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194734068|ref|YP_002113550.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|197363232|ref|YP_002142869.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|198241911|ref|YP_002214492.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|200389934|ref|ZP_03216545.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|213162267|ref|ZP_03347977.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E00-7866]
gi|213423442|ref|ZP_03356426.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E01-6750]
gi|213427916|ref|ZP_03360666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E02-1180]
gi|213586100|ref|ZP_03367926.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-0664]
gi|213617481|ref|ZP_03372307.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-2068]
gi|213647061|ref|ZP_03377114.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. J185]
gi|289823986|ref|ZP_06543585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. E98-3139]
gi|21264006|sp|Q8Z8P6|SYC_SALTI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216133|sp|Q5PCE2|SYC_SALPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187631630|sp|A9MW31|SYC_SALPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710850|sp|B5FLP7|SYC_SALDC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558785|sp|B4TA89|SYC_SALHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558786|sp|B4SXP2|SYC_SALNS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558787|sp|B5BCZ8|SYC_SALPK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558788|sp|B4TN59|SYC_SALSV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|25293235|pir||AC0569 cysteinyl-tRNA synthetase [imported] - Salmonella enterica subsp.
enterica serovar Typhi (strain CT18)
gi|16501804|emb|CAD05021.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi]
gi|29138347|gb|AAO69918.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. Ty2]
gi|56128569|gb|AAV78075.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. ATCC 9150]
gi|161364622|gb|ABX68390.1| hypothetical protein SPAB_03027 [Salmonella enterica subsp.
enterica serovar Paratyphi B str. SPB7]
gi|194401482|gb|ACF61704.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL254]
gi|194410012|gb|ACF70231.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL476]
gi|194709570|gb|ACF88791.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. CVM19633]
gi|195631983|gb|EDX50503.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Newport str. SL317]
gi|197094709|emb|CAR60239.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi A str. AKU_12601]
gi|197288172|gb|EDY27557.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Schwarzengrund str. SL480]
gi|197936427|gb|ACH73760.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. CT_02021853]
gi|199602379|gb|EDZ00925.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Virchow str. SL491]
gi|205339820|gb|EDZ26584.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Heidelberg str. SL486]
gi|322614796|gb|EFY11725.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315996572]
gi|322618903|gb|EFY15791.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-1]
gi|322623610|gb|EFY20449.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-3]
gi|322629091|gb|EFY25870.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 495297-4]
gi|322631812|gb|EFY28566.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-1]
gi|322637451|gb|EFY34153.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 515920-2]
gi|322642135|gb|EFY38745.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 531954]
gi|322645840|gb|EFY42361.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. NC_MB110209-0054]
gi|322649781|gb|EFY46206.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. OH_2009072675]
gi|322653205|gb|EFY49538.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. CASC_09SCPH15965]
gi|322660646|gb|EFY56882.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 19N]
gi|322664798|gb|EFY60991.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 81038-01]
gi|322669149|gb|EFY65299.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MD_MDA09249507]
gi|322670695|gb|EFY66828.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 414877]
gi|322679067|gb|EFY75122.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 366867]
gi|322682094|gb|EFY78119.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 413180]
gi|322685076|gb|EFY81073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 446600]
gi|323193031|gb|EFZ78254.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609458-1]
gi|323196887|gb|EFZ82029.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556150-1]
gi|323203872|gb|EFZ88889.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 609460]
gi|323207042|gb|EFZ91995.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 507440-20]
gi|323214431|gb|EFZ99182.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB101509-0077]
gi|323220129|gb|EGA04593.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB102109-0047]
gi|323226317|gb|EGA10529.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB110209-0055]
gi|323230246|gb|EGA14366.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. MB111609-0052]
gi|323233984|gb|EGA18073.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009083312]
gi|323238322|gb|EGA22380.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 2009085258]
gi|323244009|gb|EGA28018.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 315731156]
gi|323246597|gb|EGA30571.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2009159199]
gi|323252160|gb|EGA36017.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008282]
gi|323257792|gb|EGA41471.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008283]
gi|323261192|gb|EGA44784.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008284]
gi|323264876|gb|EGA48375.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008285]
gi|323272440|gb|EGA55847.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. IA_2010008287]
gi|326622240|gb|EGE28585.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Dublin str. 3246]
Length = 461
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|294624692|ref|ZP_06703360.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
gi|292601000|gb|EFF45069.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 11122]
Length = 476
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 195/496 (39%), Positives = 262/496 (52%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T++EL+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNASA 389
I V SAL +DLNT A+ + +A ++ L +
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|167550932|ref|ZP_02344688.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
gi|205324269|gb|EDZ12108.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA29]
Length = 461
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGTDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|332523431|ref|ZP_08399683.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
gi|332314695|gb|EGJ27680.1| cysteine--tRNA ligase [Streptococcus porcinus str. Jelinkova 176]
Length = 447
Score = 379 bits (974), Expect = e-103, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + I MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S + K + F+ DT +L + P
Sbjct: 60 -NVNYISNFTDVDDKIIKAAAESGIS------PKALADKFIEAFMADTKQLGIKPASQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I +Q +I G AYE+ ++ F + NY + + + + ++G
Sbjct: 113 RVMDYMGEIIAFVQELIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRIDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + P E W+SPW +GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EATLKEDPLDFALWKSAKPGEIFWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS ++ AN W+HNGF+N++ KMSKS GNF+T++++LE+
Sbjct: 233 EFPHHTNEIAQSEAKTG-QRFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLESV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
V+R + YR+PI+FT + + +AE+ L T +
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLKTVSDTNRLFDFKKS 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D N + I + A+ + + F + GI +E I
Sbjct: 345 FKEAMDDDFNAANGITVIFDFAKWINSGHYDQTIKTAFGEMLEVFGIVFQEE----VIDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+E L+ +R + F+ AD IR QL ++G L D K+ R
Sbjct: 401 EVEALIAQRQTARAARDFAKADSIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|161504307|ref|YP_001571419.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. arizonae
serovar 62:z4,z23:-- str. RSK2980]
gi|187631629|sp|A9MLA7|SYC_SALAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160865654|gb|ABX22277.1| hypothetical protein SARI_02415 [Salmonella enterica subsp.
arizonae serovar 62:z4,z23:--]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 172/494 (34%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIEITRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKSEDMTAANAMASHLRKISGVLGLLEQEPDAFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|170760749|ref|YP_001788843.1| cysteinyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|229558627|sp|B1KTA5|SYC_CLOBM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169407738|gb|ACA56149.1| cysteine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 465
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 249/487 (51%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G+R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGSRINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKNQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L + +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDDLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|328958761|ref|YP_004376147.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
gi|328675085|gb|AEB31131.1| cysteine--tRNA ligase [Carnobacterium sp. 17-4]
Length = 468
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 163/492 (33%), Positives = 244/492 (49%), Gaps = 61/492 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF I+ ++MYVCGPTVY++ HIGNAR + FD + R L Y +
Sbjct: 1 MLKIYNTLTREKEEFVPIEEGKVKMYVCGPTVYNYIHIGNARSTVAFDTVRRYLEYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII A++ ++ + + K + + +DT L TH P
Sbjct: 61 --VAYISNFTDVDDKIIRTAKE------LDLSAQEVADKFIEAYHEDTHALGVEKATHHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV 179
R ++P+++ I +I G+AYE ++ + T +YG S IDE ++ V
Sbjct: 113 RVMENMPEIVDFIAVLINKGYAYEVEGDVYYRTRKFKDYGKLSDISIDELEVGASNRLTV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K++P DF LWK + E WESPWG GRPGWHIECS M++ YLG DIH GG D
Sbjct: 173 QENNKKEDPLDFALWKSAKAEEISWESPWGAGRPGWHIECSVMATKYLGDTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A+ W+HNGF+ ++ KMSKS GN + +++++
Sbjct: 233 LTFPHHENEIAQSEAKTG-HPFAHYWMHNGFVTMDNEKMSKSIGNVVLVHDII------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
+ ++R M T YR PI + + EA LSK +
Sbjct: 285 KQVDPQIVRFFMATTQYRRPISYNETTIEEARANLSKIKTAYDNAMYRLKDAVETETDDQ 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ + +D N+ + I ++++A+ + +L F
Sbjct: 345 EQLNQFTSFKENFIKEMDDDFNSANGITVVYEMAKAMNIYSERSVVSKVVLEAMLDQFQE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I GI + + IE+L+++R K F +D IR QL+ +G IL+D
Sbjct: 405 LVQIFGIAF---AATELLDETIEQLIEDRNAARAEKNFQRSDEIRDQLKEEGIILDDT-- 459
Query: 448 PDNGQRMTRWKQ 459
+ TRW++
Sbjct: 460 ----PQGTRWRR 467
>gi|257466691|ref|ZP_05631002.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917843|ref|ZP_07914083.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691718|gb|EFS28553.1| cysteinyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 473
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 189/495 (38%), Positives = 269/495 (54%), Gaps = 61/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + F + MYVCGPTVY++ HIGNARP IVFD + R Y
Sbjct: 1 MIKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
VTYV+N TD+DDK+I+RA +E ++ + + Q +++D L +
Sbjct: 60 -KVTYVQNFTDVDDKMIKRANEEGTTVE------DVAHRYIQAYLEDMKSLHIKEEGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT HI +MI +IQN+I GHAYE+N ++ F + YG+ S++KI++ + G R+
Sbjct: 113 PKATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G FDIHGGG DLI
Sbjct: 173 TEIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGDSFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C+ AN W+HNG++N++G KMSKS GNF+ + ++L +
Sbjct: 233 FPHHENEIAQSKCSCG-GSFANYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
+ VIR ML HYR+P++F+ L++A+I L + + I
Sbjct: 285 FSGKVIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRANEISETSIALEGSAGVE 344
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA---- 389
+ A+ D NT AI + +L RE K N + I +A
Sbjct: 345 LKKALEDTKEKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLY 404
Query: 390 ----HILGIEVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGIEV E +N++ +E +++ R K ++ +D IR +L G ++D
Sbjct: 405 HILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKD 464
Query: 445 YKNPDNGQRMTRWKQ 459
K+ T W+
Sbjct: 465 GKDS------TTWRV 473
>gi|256023857|ref|ZP_05437722.1| cysteinyl-tRNA synthetase [Escherichia sp. 4_1_40B]
gi|301648555|ref|ZP_07248272.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|307137169|ref|ZP_07496525.1| cysteinyl-tRNA synthetase [Escherichia coli H736]
gi|331641048|ref|ZP_08342183.1| cysteine--tRNA ligase [Escherichia coli H736]
gi|301073390|gb|EFK88196.1| cysteinyl-tRNA synthetase [Escherichia coli MS 146-1]
gi|315616534|gb|EFU97151.1| cysteinyl-tRNA synthetase [Escherichia coli 3431]
gi|323972179|gb|EGB67391.1| cysteinyl-tRNA synthetase [Escherichia coli TA007]
gi|331037846|gb|EGI10066.1| cysteine--tRNA ligase [Escherichia coli H736]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADGSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|241888786|ref|ZP_04776092.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
gi|241864462|gb|EER68838.1| cysteinyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
Length = 465
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 183/488 (37%), Positives = 261/488 (53%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL ++ + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L + E
Sbjct: 1 MIKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++ N TD+DDKII+ + +E S S +T K F KD L C T P
Sbjct: 61 --VDFISNFTDVDDKIIKASNEEGIST------SELTEKYITAFFKDYDALGCKRATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T ++ ++I I ++ G AYEA ++ F T +YG S++ ID+ G R+
Sbjct: 113 RVTEYMQEIINFIAKLVEEGFAYEAKGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++P DF LWK++ P E W+SP+G GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 HKEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGDTIDIHAGGQDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS C +N W+HN F+N++ KMSKS GNF + +++
Sbjct: 233 HHENEIAQSEC-HNHVPFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIID----- 348
V+RL ML HYR PI++T++ + A+ K + S +D
Sbjct: 285 PMVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNDMSDEKLDTDVVA 344
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----I 391
+ +D NT +A+ + +++ R S N + L + NA+ I
Sbjct: 345 LVTEELNKFEEYMQDDFNTANALSSWYEIVRISNSYTAKEAVNKETLELINAAFETYSSI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI V ++ N S IE L+ ER K + F+ AD IR L+ +G ILED K
Sbjct: 405 LGISVKED--NTLDSEHIESLISEREEARKNRDFALADKIRDDLKEQGIILEDTK----- 457
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 458 -QGVRWKK 464
>gi|294791947|ref|ZP_06757095.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
gi|294457177|gb|EFG25539.1| cysteine--tRNA ligase [Veillonella sp. 6_1_27]
Length = 482
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 165/501 (32%), Positives = 239/501 (47%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E S I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGVS------WDTIANRYIDSYFEVMDVLGVQRADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HI +I +IQ +I G+AYE + ++ + +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIDDIIAMIQTLIDKGYAYELDGDVYYSVEKFEHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + EP WESPWG GRPGWHIECSAMS YLG FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKHGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGSCDEAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKAYEEEFEDAMSDDFNTALATSSMFGLAKEINIYYQAVTSREGVVCQEAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++G+ N ++ ++ R + K+++ AD IR +L G
Sbjct: 406 FKFMTDVIGVLEKAWEGNTGANAAEYEELMQVILSVRQACREQKQWALADCIRDRLAEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED + RWK++
Sbjct: 466 ITIEDS------PQGARWKKR 480
>gi|162139463|ref|YP_001172566.2| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
gi|187631654|sp|A4VL73|SYC_PSEU5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 185/480 (38%), Positives = 257/480 (53%), Gaps = 46/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL + F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+
Sbjct: 1 MALAIYNTLSKAKEPFRPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII RA + + + + +D TRL L P +
Sbjct: 61 D--VTYVRNITDIDDKIIRRASENG------EPFQALVERMIAAMHEDETRLNVLRPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HI M +IQ +I G AY N ++ + YG SRRKI++ K+G R+
Sbjct: 113 PRATDHIAGMHTMIQTLIDKGFAYAPGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + P EP W+SPWG GRPGWHIECS MS+ LG+ FDIHGGG DL+
Sbjct: 173 DEAKEDPLDFVLWKGAKPGEPSWDSPWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + AN W+H G + ++G KMSKS GNF TI E+LE
Sbjct: 233 FPHHENEIAQSEAATG-KLYANAWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLS 353
+ V+R ++ +HYR PI+++ L EA+ L ++ +
Sbjct: 285 YHPEVVRYLLVSSHYRSPINYSEDSLREAKSALERFYNGLKGLPEAQPAGGDEFVARFAA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE------ 399
A+ +D N+ A L ++ RE + + L A +LG+ +
Sbjct: 345 AMDDDFNSPEACAVLFEMIREVNRLREADLAAAAALAARLKVLAGVLGVLQLEPDAFLQA 404
Query: 400 -HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + +E L+ RL K + +D IR QL + G +LED K T W+
Sbjct: 405 GAAGKVDAAEVEALIAARLAARAEKNWGESDRIRDQLTAMGVVLEDGK------GGTTWR 458
>gi|294665915|ref|ZP_06731181.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
gi|292604319|gb|EFF47704.1| cysteinyl-tRNA synthetase [Xanthomonas fuscans subsp. aurantifolii
str. ICPB 10535]
Length = 476
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 195/496 (39%), Positives = 261/496 (52%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I +I +GHAY A ++F SS YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIDQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T++EL+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALETESGGDVAISKT 345
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNASA 389
I V SAL +DLNT A+ + +A ++ L +
Sbjct: 346 IPAEVESALDDDLNTPLALSVMASIASDARALRSELMHSGQASARMAQLQAARAKLLGAG 405
Query: 390 HILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
LG+ + I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 VALGLLQQDPAAWFSRGTDVGDDARITALVEERSAAKKAKDFARADAIRKQLADEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|172054928|ref|YP_001806255.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|171701209|gb|ACB54189.1| cysteinyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
Length = 486
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 172/493 (34%), Positives = 252/493 (51%), Gaps = 58/493 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KIYN+ R++ F + P + MY CG TVYD+ H+G+AR I++D++ R L+++
Sbjct: 4 EMTLKIYNSQTRRLEPFVTLLPGRVTMYCCGVTVYDYCHLGHARSYIIWDMVRRYLQWWG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VTYV+N TDIDDKI+ RA+QE S ++ I+ + + + D L +
Sbjct: 64 YE--VTYVQNFTDIDDKILRRAQQEGVS------MADISQRFIEAYFTDIRPLNVMDADQ 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T++I + LIQ ++ +AY + ++ F + YG S R + G
Sbjct: 116 YPRVTDNISGIQQLIQVLLDKNYAYAVDGDVYFHVEAFGEYGKLSGRSQSMMQAGASGRV 175
Query: 182 KYHK------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K+P+DF LWK + P EP W SPWG GRPGWHIECSAM LG+ DIHG
Sbjct: 176 AVNDLEKTKKKHPSDFALWKSAKPEEPAWHSPWGEGRPGWHIECSAMVRALLGETIDIHG 235
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL+FPHHENEIAQS A+ + A W+HNG + + G KMSKS GNF TI ELL
Sbjct: 236 GGGDLVFPHHENEIAQSEAANG-KPLAKYWLHNGMVTVNGEKMSKSLGNFTTIRELLN-- 292
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQ 339
R VIRL +L HYR+P+DFT + ++ A W +
Sbjct: 293 ----RPLDPMVIRLFVLQAHYRKPLDFTEEAISSATNGWQTLQQGLRFGEKYEDRLGWQK 348
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
+ +A+ +D N+ + L +LA+ + +LL
Sbjct: 349 NQELDSAVIEQFKAAMDDDFNSPGGLAVLFELAKNLRREGNLLTHEGKNPTDSDNLQRQW 408
Query: 383 PIFNASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
A ILG+E E ++ I KL+Q+R K+K ++ +D +R+QL+ K
Sbjct: 409 QTLVHLAGILGLEAKSEANLEDNQNFDEAEITKLIQQRNEARKVKDYAQSDRLREQLQEK 468
Query: 439 GFILEDYKNPDNG 451
G L D+ N +
Sbjct: 469 GITLIDHPNGETS 481
>gi|74311083|ref|YP_309502.1| cysteinyl-tRNA synthetase [Shigella sonnei Ss046]
gi|109894944|sp|Q3Z4P5|SYC_SHISS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|73854560|gb|AAZ87267.1| cysteine tRNA synthetase [Shigella sonnei Ss046]
gi|323163965|gb|EFZ49773.1| cysteinyl-tRNA synthetase [Shigella sonnei 53G]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYAADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTEKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|25010277|ref|NP_734672.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|77407940|ref|ZP_00784691.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|30316158|sp|Q8E7F2|SYC_STRA3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|23094629|emb|CAD45847.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|77173487|gb|EAO76605.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|319744134|gb|EFV96507.1| cysteine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
Length = 447
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 240/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ + MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + K F++D L T P
Sbjct: 61 --VNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I ++ ++ AYEAN ++ F S +Y + + +++ ++G
Sbjct: 113 RVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG+GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
S VIR + YR+P++FT + + +AE+ L T A
Sbjct: 285 SVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + ++A+ H + I GI +E +
Sbjct: 345 FQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R + F++AD IR +L +G L D K+ R
Sbjct: 401 DIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTR 446
>gi|262039625|ref|ZP_06012919.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261746382|gb|EEY33927.1| cysteine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 505
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 185/509 (36%), Positives = 263/509 (51%), Gaps = 75/509 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+ +YNT+ KI EF+ I+ ++MYVCGPTVY++ H+GNARP+++FD+L R +Y
Sbjct: 9 ENKMNLYNTMSNKIEEFKPIEEGKVKMYVCGPTVYNYIHLGNARPVVIFDILARYFKYRG 68
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV+N TD+DDKII+RA +E S +T K Q F +DT L L
Sbjct: 69 YD--VTYVQNFTDVDDKIIKRANEEGIS------PKEVTEKYIQGFFEDTELLNILQDIK 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+P+ T ++P++I I+ +I +G+AYE + + FD +YG S +KIDE ++G RV
Sbjct: 121 RPKVTENMPEIIETIEKLIENGYAYEIDGNVFFDVKKYEDYGKLSNQKIDELEIGARVDI 180
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K NP DF LWK+ EP W+SPWG+GRPGWHIECSAMS YLG+ FDIHGGG DLI
Sbjct: 181 MEIKNNPLDFALWKKKKEGEPYWDSPWGQGRPGWHIECSAMSKKYLGETFDIHGGGQDLI 240
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA A W+HNGF+ + G KMSKS GNF + E+L
Sbjct: 241 FPHHENEIAQSKCAYHGH-FAKYWVHNGFVQVNGDKMSKSTGNFFLLREILG-------K 292
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ VIRL +L THYR+P++F+ + + + L +
Sbjct: 293 FSGNVIRLFILSTHYRKPVNFSFEDMENTKKTLQNVISSIRRFEKSLEKLSSGIKSEDVS 352
Query: 347 -----------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF---- 385
D + A+ D+NT A+ + RE+ + D +
Sbjct: 353 DEKINEINKVFKEKIKSFDVKFIGAMDEDMNTPQALSTIFDQIRETNRFCDDIEKILDKE 412
Query: 386 --------------------NASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKM 422
+LG+ + E + IE L++ R K
Sbjct: 413 RNDSSFLLFEALELSYKNLKTKIEDVLGVLLMDEKKENKDDLSKNLIELLIKIRTEARKE 472
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNG 451
K FS +D IR +L+ G ++D K+
Sbjct: 473 KNFSLSDEIRDELKKIGVEIKDNKDGTTS 501
>gi|187734096|ref|YP_001879221.1| cysteinyl-tRNA synthetase [Shigella boydii CDC 3083-94]
gi|229558790|sp|B2TTB3|SYC_SHIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187431088|gb|ACD10362.1| cysteinyl tRNA synthetase [Shigella boydii CDC 3083-94]
gi|320174878|gb|EFW49998.1| Cysteinyl-tRNA synthetase [Shigella dysenteriae CDC 74-1112]
gi|320186200|gb|EFW60940.1| Cysteinyl-tRNA synthetase [Shigella flexneri CDC 796-83]
gi|332098469|gb|EGJ03435.1| cysteinyl-tRNA synthetase [Shigella boydii 3594-74]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L + L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|306813010|ref|ZP_07447203.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
gi|305853773|gb|EFM54212.1| cysteinyl-tRNA synthetase [Escherichia coli NC101]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ P DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRTPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|194432744|ref|ZP_03065029.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
gi|194419006|gb|EDX35090.1| cysteinyl tRNA synthetase [Shigella dysenteriae 1012]
Length = 461
Score = 379 bits (973), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHITEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|170683319|ref|YP_001742670.1| cysteinyl-tRNA synthetase [Escherichia coli SMS-3-5]
gi|331645713|ref|ZP_08346816.1| cysteine--tRNA ligase [Escherichia coli M605]
gi|226735059|sp|B1LKE5|SYC_ECOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|170521037|gb|ACB19215.1| cysteinyl tRNA synthetase [Escherichia coli SMS-3-5]
gi|222032317|emb|CAP75056.1| Cysteinyl-tRNA synthetase [Escherichia coli LF82]
gi|281177699|dbj|BAI54029.1| cysteinyl-tRNA synthetase [Escherichia coli SE15]
gi|312945102|gb|ADR25929.1| cysteinyl-tRNA synthetase [Escherichia coli O83:H1 str. NRG 857C]
gi|330910316|gb|EGH38826.1| cysteinyl-tRNA synthetase [Escherichia coli AA86]
gi|331044465|gb|EGI16592.1| cysteine--tRNA ligase [Escherichia coli M605]
Length = 461
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|332202472|gb|EGJ16541.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
Length = 447
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 230/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ +G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETVRKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++ + + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|148998267|ref|ZP_01825736.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|147755910|gb|EDK62954.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
Length = 447
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 230/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ +G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++ + + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|26246536|ref|NP_752575.1| cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91209601|ref|YP_539587.1| cysteinyl-tRNA synthetase [Escherichia coli UTI89]
gi|117622783|ref|YP_851696.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157155754|ref|YP_001461714.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|157160050|ref|YP_001457368.1| cysteinyl-tRNA synthetase [Escherichia coli HS]
gi|162139357|ref|YP_688055.2| cysteinyl-tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|170021093|ref|YP_001726047.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|191172271|ref|ZP_03033813.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|193064170|ref|ZP_03045254.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|193067585|ref|ZP_03048552.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194429574|ref|ZP_03062094.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194437452|ref|ZP_03069549.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209917742|ref|YP_002291826.1| cysteinyl-tRNA synthetase [Escherichia coli SE11]
gi|218553090|ref|YP_002386003.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218557437|ref|YP_002390350.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218688385|ref|YP_002396597.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|218693989|ref|YP_002401656.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218698893|ref|YP_002406522.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|227884465|ref|ZP_04002270.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|237707473|ref|ZP_04537954.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|253774486|ref|YP_003037317.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|254160594|ref|YP_003043702.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|256020497|ref|ZP_05434362.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|260842721|ref|YP_003220499.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|293408676|ref|ZP_06652515.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|293413782|ref|ZP_06656431.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|293418593|ref|ZP_06661028.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|297517317|ref|ZP_06935703.1| cysteinyl-tRNA synthetase [Escherichia coli OP50]
gi|300819552|ref|ZP_07099746.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300820228|ref|ZP_07100380.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300903202|ref|ZP_07121133.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300919177|ref|ZP_07135707.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300925801|ref|ZP_07141656.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300929112|ref|ZP_07144605.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300940519|ref|ZP_07155089.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300987704|ref|ZP_07178317.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|301049738|ref|ZP_07196683.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|301301682|ref|ZP_07207817.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|301327827|ref|ZP_07221017.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|307314558|ref|ZP_07594160.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|312970621|ref|ZP_07784802.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|331651486|ref|ZP_08352506.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331656583|ref|ZP_08357545.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331661914|ref|ZP_08362837.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331666881|ref|ZP_08367755.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331672057|ref|ZP_08372853.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331676195|ref|ZP_08376907.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331681920|ref|ZP_08382553.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332281678|ref|ZP_08394091.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|29336539|sp|Q8FK44|SYC_ECOL6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123266145|sp|Q1RF08|SYC_ECOUT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629813|sp|A7ZIT5|SYC_ECO24 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629814|sp|A7ZXI1|SYC_ECOHS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629815|sp|A1A8J2|SYC_ECOK1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187631652|sp|Q0T776|SYC_SHIF8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189082063|sp|B1IZ75|SYC_ECOLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710841|sp|B6I0H1|SYC_ECOSE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735055|sp|B7ME49|SYC_ECO45 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735056|sp|B7NL20|SYC_ECO7I RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735057|sp|B7M4M9|SYC_ECO8A RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781679|sp|B7L7F3|SYC_ECO55 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781680|sp|B7MRI9|SYC_ECO81 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|26106935|gb|AAN79119.1|AE016757_23 Cysteinyl-tRNA synthetase [Escherichia coli CFT073]
gi|91071175|gb|ABE06056.1| cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Escherichia coli
UTI89]
gi|115511907|gb|ABI99981.1| cysteinyl-tRNA synthetase [Escherichia coli APEC O1]
gi|157065730|gb|ABV04985.1| cysteinyl tRNA synthetase [Escherichia coli HS]
gi|157077784|gb|ABV17492.1| cysteinyl-tRNA synthetase [Escherichia coli E24377A]
gi|169756021|gb|ACA78720.1| cysteinyl-tRNA synthetase [Escherichia coli ATCC 8739]
gi|190907370|gb|EDV66967.1| cysteinyl tRNA synthetase [Escherichia coli F11]
gi|192929199|gb|EDV82809.1| cysteinyl tRNA synthetase [Escherichia coli E22]
gi|192958997|gb|EDV89433.1| cysteinyl tRNA synthetase [Escherichia coli E110019]
gi|194412371|gb|EDX28673.1| cysteinyl tRNA synthetase [Escherichia coli B171]
gi|194423621|gb|EDX39611.1| cysteinyl tRNA synthetase [Escherichia coli 101-1]
gi|209911001|dbj|BAG76075.1| cysteinyl-tRNA synthase [Escherichia coli SE11]
gi|218350721|emb|CAU96413.1| cysteinyl-tRNA synthetase [Escherichia coli 55989]
gi|218359858|emb|CAQ97400.1| cysteinyl-tRNA synthetase [Escherichia coli IAI1]
gi|218364206|emb|CAR01871.1| cysteinyl-tRNA synthetase [Escherichia coli S88]
gi|218368879|emb|CAR16629.1| cysteinyl-tRNA synthetase [Escherichia coli IAI39]
gi|218425949|emb|CAR06755.1| cysteinyl-tRNA synthetase [Escherichia coli ED1a]
gi|226898683|gb|EEH84942.1| cysteinyl-tRNA synthetase [Escherichia sp. 3_2_53FAA]
gi|227838551|gb|EEJ49017.1| cysteinyl-tRNA synthetase [Escherichia coli 83972]
gi|242376305|emb|CAQ30998.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|253325530|gb|ACT30132.1| cysteinyl-tRNA synthetase [Escherichia coli 'BL21-Gold(DE3)pLysS
AG']
gi|253972495|gb|ACT38166.1| cysteinyl-tRNA synthetase [Escherichia coli B str. REL606]
gi|253976705|gb|ACT42375.1| cysteinyl-tRNA synthetase [Escherichia coli BL21(DE3)]
gi|257757868|dbj|BAI29365.1| cysteinyl-tRNA synthetase [Escherichia coli O103:H2 str. 12009]
gi|284920336|emb|CBG33396.1| cysteinyl-tRNA synthetase [Escherichia coli 042]
gi|291325121|gb|EFE64536.1| cysteinyl-tRNA synthetase [Escherichia coli B088]
gi|291433840|gb|EFF06813.1| cysteinyl-tRNA synthetase [Escherichia coli B185]
gi|291471854|gb|EFF14337.1| cysteinyl-tRNA synthetase [Escherichia coli B354]
gi|294494083|gb|ADE92839.1| cysteinyl-tRNA synthetase [Escherichia coli IHE3034]
gi|300298494|gb|EFJ54879.1| cysteinyl-tRNA synthetase [Escherichia coli MS 185-1]
gi|300404775|gb|EFJ88313.1| cysteinyl-tRNA synthetase [Escherichia coli MS 84-1]
gi|300407683|gb|EFJ91221.1| cysteinyl-tRNA synthetase [Escherichia coli MS 45-1]
gi|300413722|gb|EFJ97032.1| cysteinyl-tRNA synthetase [Escherichia coli MS 115-1]
gi|300418111|gb|EFK01422.1| cysteinyl-tRNA synthetase [Escherichia coli MS 182-1]
gi|300454692|gb|EFK18185.1| cysteinyl-tRNA synthetase [Escherichia coli MS 21-1]
gi|300462904|gb|EFK26397.1| cysteinyl-tRNA synthetase [Escherichia coli MS 187-1]
gi|300527013|gb|EFK48082.1| cysteinyl-tRNA synthetase [Escherichia coli MS 119-7]
gi|300527878|gb|EFK48940.1| cysteinyl-tRNA synthetase [Escherichia coli MS 107-1]
gi|300843179|gb|EFK70939.1| cysteinyl-tRNA synthetase [Escherichia coli MS 124-1]
gi|300845630|gb|EFK73390.1| cysteinyl-tRNA synthetase [Escherichia coli MS 78-1]
gi|306905876|gb|EFN36399.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|307552429|gb|ADN45204.1| cysteinyl-tRNA synthetase [Escherichia coli ABU 83972]
gi|307628004|gb|ADN72308.1| cysteinyl-tRNA synthetase [Escherichia coli UM146]
gi|309700788|emb|CBJ00084.1| cysteinyl-tRNA synthetase [Escherichia coli ETEC H10407]
gi|310337270|gb|EFQ02408.1| cysteinyl-tRNA synthetase [Escherichia coli 1827-70]
gi|315059799|gb|ADT74126.1| cysteinyl-tRNA synthetase [Escherichia coli W]
gi|315256355|gb|EFU36323.1| cysteinyl-tRNA synthetase [Escherichia coli MS 85-1]
gi|315289989|gb|EFU49378.1| cysteinyl-tRNA synthetase [Escherichia coli MS 110-3]
gi|315294314|gb|EFU53665.1| cysteinyl-tRNA synthetase [Escherichia coli MS 153-1]
gi|315299089|gb|EFU58343.1| cysteinyl-tRNA synthetase [Escherichia coli MS 16-3]
gi|320180178|gb|EFW55115.1| Cysteinyl-tRNA synthetase [Shigella boydii ATCC 9905]
gi|320201474|gb|EFW76054.1| Cysteinyl-tRNA synthetase [Escherichia coli EC4100B]
gi|323160878|gb|EFZ46803.1| cysteinyl-tRNA synthetase [Escherichia coli E128010]
gi|323170660|gb|EFZ56310.1| cysteinyl-tRNA synthetase [Escherichia coli LT-68]
gi|323184846|gb|EFZ70216.1| cysteinyl-tRNA synthetase [Escherichia coli 1357]
gi|323379632|gb|ADX51900.1| cysteinyl-tRNA synthetase [Escherichia coli KO11]
gi|323945190|gb|EGB41250.1| cysteinyl-tRNA synthetase [Escherichia coli H120]
gi|323952862|gb|EGB48730.1| cysteinyl-tRNA synthetase [Escherichia coli H252]
gi|323958529|gb|EGB54234.1| cysteinyl-tRNA synthetase [Escherichia coli H263]
gi|323965083|gb|EGB60543.1| cysteinyl-tRNA synthetase [Escherichia coli M863]
gi|323975981|gb|EGB71074.1| cysteinyl-tRNA synthetase [Escherichia coli TW10509]
gi|324006401|gb|EGB75620.1| cysteinyl-tRNA synthetase [Escherichia coli MS 57-2]
gi|324010562|gb|EGB79781.1| cysteinyl-tRNA synthetase [Escherichia coli MS 60-1]
gi|324019545|gb|EGB88764.1| cysteinyl-tRNA synthetase [Escherichia coli MS 117-3]
gi|324116764|gb|EGC10678.1| cysteinyl-tRNA synthetase [Escherichia coli E1167]
gi|327254874|gb|EGE66490.1| cysteinyl-tRNA synthetase [Escherichia coli STEC_7v]
gi|331050759|gb|EGI22816.1| cysteine--tRNA ligase [Escherichia coli M718]
gi|331054831|gb|EGI26840.1| cysteine--tRNA ligase [Escherichia coli TA206]
gi|331060336|gb|EGI32300.1| cysteine--tRNA ligase [Escherichia coli TA143]
gi|331066105|gb|EGI37989.1| cysteine--tRNA ligase [Escherichia coli TA271]
gi|331071046|gb|EGI42405.1| cysteine--tRNA ligase [Escherichia coli TA280]
gi|331076253|gb|EGI47535.1| cysteine--tRNA ligase [Escherichia coli H591]
gi|331081122|gb|EGI52287.1| cysteine--tRNA ligase [Escherichia coli H299]
gi|332104030|gb|EGJ07376.1| cysteinyl-tRNA synthetase [Shigella sp. D9]
gi|332341889|gb|AEE55223.1| cysteinyl-tRNA synthetase CysS [Escherichia coli UMNK88]
gi|332760809|gb|EGJ91097.1| cysteinyl-tRNA synthetase [Shigella flexneri 4343-70]
gi|333007742|gb|EGK27218.1| cysteinyl-tRNA synthetase [Shigella flexneri K-218]
gi|333008207|gb|EGK27682.1| cysteinyl-tRNA synthetase [Shigella flexneri VA-6]
gi|333009963|gb|EGK29398.1| cysteinyl-tRNA synthetase [Shigella flexneri K-272]
gi|333020797|gb|EGK40057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-227]
Length = 461
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|218547963|ref|YP_002381754.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|226735060|sp|B7LJI4|SYC_ESCF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218355504|emb|CAQ88115.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ATCC 35469]
gi|324113037|gb|EGC07013.1| cysteinyl-tRNA synthetase [Escherichia fergusonii B253]
Length = 461
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMVAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|15800263|ref|NP_286275.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 EDL933]
gi|15829842|ref|NP_308615.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|168747790|ref|ZP_02772812.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|168754640|ref|ZP_02779647.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|168768489|ref|ZP_02793496.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|168774602|ref|ZP_02799609.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|168779029|ref|ZP_02804036.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|168786387|ref|ZP_02811394.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|195936093|ref|ZP_03081475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC4024]
gi|208808572|ref|ZP_03250909.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208815777|ref|ZP_03256956.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208822926|ref|ZP_03263244.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209397071|ref|YP_002269179.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|217324178|ref|ZP_03440262.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254791714|ref|YP_003076551.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|261224014|ref|ZP_05938295.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK2000]
gi|261257708|ref|ZP_05950241.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. FRIK966]
gi|291281437|ref|YP_003498255.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|21264001|sp|Q8XCT9|SYC_ECO57 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710840|sp|B5YPP1|SYC_ECO5E RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|12513423|gb|AAG54883.1|AE005233_9 cysteine tRNA synthetase [Escherichia coli O157:H7 str. EDL933]
gi|13360046|dbj|BAB34011.1| cysteine tRNA synthetase [Escherichia coli O157:H7 str. Sakai]
gi|187769725|gb|EDU33569.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4196]
gi|188017727|gb|EDU55849.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4113]
gi|189003129|gb|EDU72115.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4076]
gi|189357976|gb|EDU76395.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4401]
gi|189362536|gb|EDU80955.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4486]
gi|189373672|gb|EDU92088.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC869]
gi|208728373|gb|EDZ77974.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4206]
gi|208732425|gb|EDZ81113.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4045]
gi|208737119|gb|EDZ84803.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4042]
gi|209158471|gb|ACI35904.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC4115]
gi|209777878|gb|ACI87251.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777880|gb|ACI87252.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777882|gb|ACI87253.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777884|gb|ACI87254.1| cysteine tRNA synthetase [Escherichia coli]
gi|209777886|gb|ACI87255.1| cysteine tRNA synthetase [Escherichia coli]
gi|217320399|gb|EEC28823.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. TW14588]
gi|254591114|gb|ACT70475.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. TW14359]
gi|290761310|gb|ADD55271.1| Cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. CB9615]
gi|320192951|gb|EFW67591.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. EC1212]
gi|320638305|gb|EFX08030.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. G5101]
gi|320643709|gb|EFX12839.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. 493-89]
gi|320649025|gb|EFX17612.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H- str. H 2687]
gi|320654603|gb|EFX22608.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. 3256-97 TW
07815]
gi|320660389|gb|EFX27860.1| cysteinyl-tRNA synthetase [Escherichia coli O55:H7 str. USDA 5905]
gi|320665083|gb|EFX32180.1| cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. LSU-61]
gi|326341299|gb|EGD65091.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1044]
gi|326345924|gb|EGD69663.1| Cysteinyl-tRNA synthetase [Escherichia coli O157:H7 str. 1125]
Length = 461
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|163842948|ref|YP_001627352.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
gi|187629797|sp|B0CL02|SYC_BRUSI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|163673671|gb|ABY37782.1| cysteinyl-tRNA synthetase [Brucella suis ATCC 23445]
Length = 506
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 221/502 (44%), Positives = 290/502 (57%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YN L R F ID N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 6 PQLRLYNMLTRTKEAFAPIDAKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P +P N+AI +T QF D T L L PT Q
Sbjct: 66 AQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQ 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 126 PRATEHMDEMRAMIDRLVQRGVAYVAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGA 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 186 RVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGG 245
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 246 LKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSK 305
Query: 281 SNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 306 SLGNFITIRDVLNDGLPQLGEWGDNTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESA 365
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W +G P LS +DLN+ +AI AL R++ K D+ +
Sbjct: 366 DELHRWYGLLRDEGFGAPEKLSHASAVAAALCDDLNSWAAITAL----RQAFKVRDVAAL 421
Query: 385 FNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQL 435
A ++G+ ++ I AI + ERL + K ++ AD IR +L
Sbjct: 422 GEGMA-LMGLLDPYFVTASDVPIFARADVDASAIAARIAERLNFINAKNWAEADRIRDEL 480
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R+T W
Sbjct: 481 LQEGVQLKDSKDPATGERITTW 502
>gi|329767862|ref|ZP_08259376.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
gi|328838650|gb|EGF88249.1| cysteinyl-tRNA synthetase [Gemella haemolysans M341]
Length = 465
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 182/488 (37%), Positives = 264/488 (54%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL ++ + I+ + +RMYVCGPTVY++ HIGNARP+IVFDV+ + L + E
Sbjct: 1 MIKLYNTLTKQKEILKTIEENKVRMYVCGPTVYNYIHIGNARPIIVFDVVRKYLEHSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++ N TD+DDKII+ + +E S S +T K F KD L C T P
Sbjct: 61 --VDFISNFTDVDDKIIKASNEEGIST------SELTDKYINAFFKDYDALGCKRATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T ++ ++I I ++ G AYEA+ ++ F T +YG S++ ID+ G R+
Sbjct: 113 RVTEYMQEIIKFIAKLVEEGFAYEADGDVYFRTRKKEDYGKLSKQSIDDLISGARIEVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++P DF LWK++ P E W+SP+G GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 HKEDPLDFALWKKAKPGEVKWDSPFGEGRPGWHIECSVMAKETLGETIDIHAGGQDLTFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS C +N W+HN F+N++ KMSKS GNF + +++
Sbjct: 233 HHENEIAQSEC-HNHASFSNYWMHNAFINIDNVKMSKSLGNFRLVKDIIA-------EID 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIID----- 348
V+RL ML HYR PI++T++ + A+ K + ++ +D
Sbjct: 285 PMVLRLFMLTVHYRTPINYTLENIELAKTNFEKIKTSYQNLQFRLNNEMTEEKLDTEVVT 344
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH----I 391
+ +D NT +A+ + +++ R S N + L + NA+ I
Sbjct: 345 LVTEELDKFEEYMQDDFNTANALSSWYEIVRISNSYTAKETVNKETLELINAAFETYSSI 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI V ++ N S IE L+ ER K + F+ AD IR L+ +G ILED K
Sbjct: 405 LGINVKED--NTLDSEHIESLIAEREAARKNRDFALADKIRDDLKEQGIILEDTK----- 457
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 458 -QGVRWKK 464
>gi|118602151|ref|YP_903366.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
gi|118567090|gb|ABL01895.1| cysteinyl-tRNA synthetase [Candidatus Ruthia magnifica str. Cm
(Calyptogena magnifica)]
Length = 462
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 184/484 (38%), Positives = 264/484 (54%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL ++ F+ I+ + +YVCG TVYD+ H+G+AR +++FDV+ R LR Y+
Sbjct: 1 MLKIYNTLSKQKEVFRPINADKVGIYVCGMTVYDYCHMGHARILVIFDVIIRHLRRYF-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I +T++ +D L L P +P
Sbjct: 59 PNVEYVRNITDIDDKIIKRAIENK------EDIYALTNRFIDAMHEDERALGVLPPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RATN + Q+ Y+I+++I G AY+ N ++ + NYG SR+ ID+ + G R+ +
Sbjct: 113 RATNAMKQIFYMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKLSRKNIDKLEAGARIEIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAMS+H+LG FDIHGGG+DL F
Sbjct: 173 SAKKNPLDFVLWKMSKPNEPSWDSPWGQGRPGWHIECSAMSTHHLGNHFDIHGGGMDLSF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+H GF+N++ KMSKS NF TI +LE+ +
Sbjct: 233 PHHENEIAQSEGANNC-TFVNTWMHIGFVNIDDEKMSKSLNNFFTIRSILES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDP 349
+R ++ +HYR P++F+ L +A+ LS+
Sbjct: 285 NCETLRYFIMSSHYRSPLNFSDDNLNKAKSSLSRLYTAIRGLNTSSTVTEKVPMYFDYSV 344
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV--CKE 399
AL ND NT A+ L +LA+ + + L + +GI +
Sbjct: 345 RFNEALDNDFNTPIALSILFELAKTVNLQRKKDVDQANALAQLLKKLGDYIGILQMDADK 404
Query: 400 HLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
L + IS ++ + R K F+ +D IR +L G +LED N T
Sbjct: 405 FLKQGISLSNSEVDVKITSRNEARADKNFALSDQIRDKLAELGIVLEDNAND------TT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRRK 462
>gi|260853742|ref|YP_003227633.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|260866682|ref|YP_003233084.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|257752391|dbj|BAI23893.1| cysteinyl-tRNA synthetase [Escherichia coli O26:H11 str. 11368]
gi|257763038|dbj|BAI34533.1| cysteinyl-tRNA synthetase [Escherichia coli O111:H- str. 11128]
gi|323153431|gb|EFZ39686.1| cysteinyl-tRNA synthetase [Escherichia coli EPECa14]
gi|323178201|gb|EFZ63779.1| cysteinyl-tRNA synthetase [Escherichia coli 1180]
Length = 461
Score = 379 bits (972), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYIALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|56752435|ref|YP_173136.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81300471|ref|YP_400679.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
gi|61216122|sp|Q5MZA4|SYC_SYNP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109894954|sp|Q31MM7|SYC_SYNE7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56687394|dbj|BAD80616.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81169352|gb|ABB57692.1| cysteinyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 478
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 175/496 (35%), Positives = 245/496 (49%), Gaps = 58/496 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ + ++ +Y CG TVYD+ H+G+AR IV+D L R L +
Sbjct: 1 MTLSLYNTLTRQKQRFEPLQAGSVSLYCCGVTVYDYCHLGHARSYIVWDTLRRYLLWLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDKI+ R+RQE + + I + TQ + +D RL L
Sbjct: 61 --RVRYVQNFTDIDDKILRRSRQEGTT------MQAIADRYTQAYFEDMARLNILEADDY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LI + G AY A+ ++ F +YG S RK+++ K G +
Sbjct: 113 PRATHTLDGIQRLIAELEDKGFAYAADGDVYFSVRRFQDYGKLSGRKLEDLKAGASGRVE 172
Query: 183 YHKKNPAD----FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+++ F LWK + P EP W+SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 SAEESLKHDPFDFALWKAAKPEEPAWDSPWGPGRPGWHIECSAMVRDRLGDSIDIHVGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A W+HNG +N+ G KMSKS GNF TI +LL+
Sbjct: 233 DLVFPHHENEIAQSEAVTG-HPLARYWLHNGMVNVGGEKMSKSLGNFTTIRQLLDEG--- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQTST 342
V+RL +L +YR+PIDFT + L + W ++ T
Sbjct: 289 --GISPMVLRLFVLQANYRKPIDFTDEALQACQNGWETLQEGLHFGEHWGDRLGWTESVT 346
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIF 385
+ A+ +DLNT +A+ L +LA+E + +LL
Sbjct: 347 VDPDLSDRFRMAMDDDLNTPAALAVLFELAKELRRQQNLLIHEGHLDGDAQQLHQHWVTL 406
Query: 386 NASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
A +LG+E E N+ AIE + +R + K F+ AD IR L G L
Sbjct: 407 VQLAGVLGLEAEPELAETNELDEAAIEDWIAKRHAARQAKDFAEADRIRHYLADLGITLI 466
Query: 444 DYKNPDNGQRMTRWKQ 459
D +TRW +
Sbjct: 467 DQAGG-----ITRWSR 477
>gi|323938475|gb|EGB34726.1| cysteinyl-tRNA synthetase [Escherichia coli E1520]
Length = 461
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGK-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|251781692|ref|YP_002995994.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390321|dbj|BAH80780.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 447
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 60 -RVNYISNFTDVDDKIIKAAAQAGVS------PKELSDRFIAAFMEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I +Q +I G AYE ++ F +Y + + + E ++G
Sbjct: 113 RVMDYMTEIISFVQVLIGKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
V+R + YR+PI+FT + + +AEI L T A
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFVTA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + +A+ + F + GI +E +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKEAFEKILAVFGIVFEEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|323191193|gb|EFZ76457.1| cysteinyl-tRNA synthetase [Escherichia coli RN587/1]
Length = 461
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKGGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|15900500|ref|NP_345104.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|111657664|ref|ZP_01408394.1| hypothetical protein SpneT_02001141 [Streptococcus pneumoniae
TIGR4]
gi|149005703|ref|ZP_01829442.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|149021553|ref|ZP_01835608.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
gi|168490519|ref|ZP_02714662.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|168576506|ref|ZP_02722380.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|225858428|ref|YP_002739938.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|225860592|ref|YP_002742101.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|298230928|ref|ZP_06964609.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254670|ref|ZP_06978256.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|298502386|ref|YP_003724326.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
gi|307126794|ref|YP_003878825.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
gi|21264019|sp|Q97S25|SYC_STRPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|14972066|gb|AAK74744.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|147762643|gb|EDK69603.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|147930249|gb|EDK81234.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
gi|183575011|gb|EDT95539.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|183577730|gb|EDT98258.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|225720814|gb|ACO16668.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|225728330|gb|ACO24181.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|298237981|gb|ADI69112.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae TCH8431/19A]
gi|306483856|gb|ADM90725.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
gi|327390330|gb|EGE88671.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
gi|332077024|gb|EGI87486.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
Length = 447
Score = 378 bits (971), Expect = e-103, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 233/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|312865434|ref|ZP_07725661.1| cysteine--tRNA ligase [Streptococcus downei F0415]
gi|311098952|gb|EFQ57169.1| cysteine--tRNA ligase [Streptococcus downei F0415]
Length = 447
Score = 378 bits (971), Expect = e-102, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRDFVPLHEGQVNMYVCGPTVYNYIHIGNARSSVAFDTIRRYFEYAGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A++ S + +K F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAAKEADMS------PKDLAAKFIAAFMEDTKALGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R + + Q+I +Q ++ G AYEA ++ F NY + + + + + ++G
Sbjct: 113 RVMDFMDQIIDFVQVLMDKGFAYEAGGDVYFRVQKSHNYAALANKTLADLEVGASGRTDS 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETELKEDPLDFALWKSAKLGEISWDSPWGAGRPGWHIECSVMSTTILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T+++LL +
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDLL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
+ V+R + HYR+PI+FT + + +A+ L T T
Sbjct: 285 TVDGQVLRFFLATQHYRKPINFTDKAIHDAKANLKYLKNTYTLPLDEQSDQADLDKFLAD 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ +D N + I + LA+ N + F + GI +E +
Sbjct: 345 FKTAMDDDFNAANGITVIFDLAKWINSGHYNQAIKDAFAKMLEVFGIVFQEES----LDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K F++AD IR L ++G L D K+ R
Sbjct: 401 EIEALIKKRQAARAAKDFATADKIRDDLAAQGIKLLDTKDGVRWTR 446
>gi|254456599|ref|ZP_05070028.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
gi|207083601|gb|EDZ61027.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. HTCC7211]
Length = 449
Score = 378 bits (971), Expect = e-102, Method: Composition-based stats.
Identities = 189/470 (40%), Positives = 269/470 (57%), Gaps = 31/470 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I + N L K +F +D NI MYVCGPTVYD HIGNARP+++FD+L+++L+
Sbjct: 1 MGNDIFLTNNLSNKKEKFVPLDEKNIGMYVCGPTVYDDPHIGNARPIVIFDILFKVLKKK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITD+DDKII+ ++++ N +IS +T + F +D L C P+
Sbjct: 61 F--SNVTYVRNITDVDDKIIKSSKEK------NISISDLTQTVIKSFNEDCNYLNCENPS 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
QP+AT HI MI +I +I G AYE N + F+ +YG S +K+++ G+R+
Sbjct: 113 QQPKATEHIDLMIEMISELIKKGFAYENNQHVYFEVKKFDDYGKLSNKKLEDLIAGSRIE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+KKN DF+LWK S EP W+SPWG+GRPGWH+ECSAMS +LG FDIHGGG+DL
Sbjct: 173 VSDNKKNSEDFVLWKPSLDNEPAWDSPWGKGRPGWHLECSAMSKKFLGNEFDIHGGGIDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA+ + AN W+HN F+ + KM+KS GN + I +
Sbjct: 233 IFPHHENEIAQSRCANDTDVFANYWLHNAFITMSNEKMAKSQGNILKIKDF-------RN 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-TSKGIIDPAVLSALYNDL 359
V+RLA++ HY++P+D+ + L + + + KW S +D ++ LY+D+
Sbjct: 286 KVSGQVLRLALISAHYKQPLDWNDKLLEDCQNTIDKWYNVYLPSDNDLDEEIIQPLYDDI 345
Query: 360 NTVSAIQALHKLARESTKNHDL-LPIFNASAHILGIEVC--------KEHLNKNISIAIE 410
NT I LHKL ++ K + IFN++ + +G+ K+ IE
Sbjct: 346 NTPGYIANLHKLYDKANKGDEKDKQIFNSACNFIGLLQETKEVWLNHKKDKIDISEEEIE 405
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+Q R K + AD IR L KG ++ED K+ T WK K
Sbjct: 406 NKIQLRNTARANKDYKEADNIRDYLLDKGVLIED-KDGK-----TIWKFK 449
>gi|157146856|ref|YP_001454175.1| cysteinyl-tRNA synthetase [Citrobacter koseri ATCC BAA-895]
gi|157084061|gb|ABV13739.1| hypothetical protein CKO_02631 [Citrobacter koseri ATCC BAA-895]
Length = 461
Score = 378 bits (971), Expect = e-102, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -TLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKHNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKSEDMAAANAMASHLRKISGVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDGELAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|313893308|ref|ZP_07826883.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
gi|313442204|gb|EFR60621.1| cysteine--tRNA ligase [Veillonella sp. oral taxon 158 str. F0412]
Length = 482
Score = 378 bits (971), Expect = e-102, Method: Composition-based stats.
Identities = 166/501 (33%), Positives = 238/501 (47%), Gaps = 63/501 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I +YNT+ R+ F + P +MYVCG T Y+ HIGNARP + +DV+ R +++
Sbjct: 1 MREITVYNTMTRQKEVFNPVTPGEAKMYVCGVTPYNHPHIGNARPFVTWDVIRRYMKHVG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N TD+DDKII + E S I ++ + + L
Sbjct: 61 Y--KVTYVQNFTDVDDKIINTSNGEGVS------WDTIANRYIDSYFEVMDALGVQRADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HI +I +I +I G+AYE + ++ + +YG S R +D+ + G R+
Sbjct: 113 YPRVSTHIEDIIAMISTLIEKGYAYELDGDVYYSVDKFEHYGELSGRTLDDMEAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FD HGGG DLI
Sbjct: 173 DGRKKNPMDFALWKAAKPGEPYWESPWGNGRPGWHIECSAMSQKYLGTEFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS W+HNGF+ + KMSKS NF + ++LE
Sbjct: 233 FPHHENEIAQSEGCSGQHPAVRYWLHNGFITINSEKMSKSLNNFFLVKDILE-------Q 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L THYR P+DF+ +RL EA L + +
Sbjct: 286 YSPDALRYFLLSTHYRSPLDFSDERLEEANKSLERLSTAIENLLYLEKCEPGPCDEAQRL 345
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A+ +D NT A ++ LA+E ++ I
Sbjct: 346 LEKAKEYEEEFEAAMSDDFNTALATSSMFGLAKEINIYYQAVTGREGVVCQEAIAEVKRI 405
Query: 385 FNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ++GI N ++ ++ R K++ AD IR +L G
Sbjct: 406 FKFMTEVIGILEKAWEGNTGANAAEYEELMQVILSVRQACRDQKQWGLADCIRDRLSEIG 465
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
+ED + RWK++
Sbjct: 466 ITIEDS------PQGARWKKR 480
>gi|163868002|ref|YP_001609206.1| cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
gi|187629795|sp|A9IRQ9|SYC_BART1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|161017653|emb|CAK01211.1| Cysteinyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
Length = 503
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 225/506 (44%), Positives = 304/506 (60%), Gaps = 51/506 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K+++ YNTL RK F IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MMKELRFYNTLTRKKENFIPIDPTKVRLYVCGPTVYDYAHIGNARPLIVFDILFRLLRHV 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG V Y RNITD+DDKI RA E+P++P+N+AI +T + QF +DT L CL PT
Sbjct: 61 YGSDHVLYARNITDVDDKINARAACEYPNLPLNEAIRQLTERTYFQFQQDTIALGCLLPT 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRRKIDEQKMGT 177
QPRAT H+ +M LI+ ++ GHAY+A N I+F SSI N F+ R +DE + G
Sbjct: 121 SQPRATEHLEEMRALIERLLEKGHAYKAENHILFSISSIKNPPHYGAFANRSLDEMRAGA 180
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIECSAM------------ 222
R+ +K+ DF+LWK S EPGW+SP G RPGWHIECSAM
Sbjct: 181 RIDVAAYKREEMDFVLWKPSAEGEPGWKSPGGIPVLGRPGWHIECSAMSMAKLLAPYGGG 240
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ +FDIHGGGLDLIFPHHENEIAQSC A E+ AN W+HNGFL +EG+KMSK
Sbjct: 241 LTCDDPIANIFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSK 300
Query: 281 SNGNFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI +LE ++W R +ML THYREP+++T QRL ++
Sbjct: 301 SFGNFITIRSVLENNFLEFNGALAYEIKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSS 360
Query: 332 ILLSKWPQ-------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W + + I+ ++ AL +DLNT A L R+ K D L +
Sbjct: 361 SELYRWYELLRDKKSMMENNEAIEDTLIDALSDDLNTPKA----FTLLRKFYKAGDALAL 416
Query: 385 FNASAHILGIEVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
N ++LG+ + S IE+ + ERL L+ K++ +AD IR +
Sbjct: 417 ANGM-NLLGLLRQEWIKEIDCPLFIKKTSLDSKFIEQCIAERLRLIHNKEWGAADKIRNE 475
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
L ++G +L+D K+P +G+R+T W+ K
Sbjct: 476 LAAEGILLKDGKDPQSGKRITVWEIK 501
>gi|257452930|ref|ZP_05618229.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|317059471|ref|ZP_07923956.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313685147|gb|EFS21982.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
Length = 473
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 189/495 (38%), Positives = 269/495 (54%), Gaps = 61/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + F + MYVCGPTVY++ HIGNARP IVFD + R Y
Sbjct: 1 MIKIYNTLSASLDTFTPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
VTYV+N TD+DDK+I+RA +E ++ + + Q +++D L +
Sbjct: 60 -KVTYVQNFTDVDDKMIKRANEEGTTVE------DVAHRYIQAYLEDMKSLHIKEEGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT HI +MI +IQN+I GHAYE+N ++ F + YG+ S++KI++ + G R+
Sbjct: 113 PKATEHIQEMIDMIQNLIDKGHAYESNGDVYFRVATYHQEYGALSKQKIEDLQSGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS+ Y G FDIHGGG DLI
Sbjct: 173 TEIKESPLDFALWKASKPGEPSWKSPWGEGRPGWHIECSAMSNKYFGNSFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C+ AN W+HNG++N++G KMSKS GNF+ + ++L +
Sbjct: 233 FPHHENEIAQSKCSCG-GSFANYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------ 349
+ VIR ML HYR+P++F+ L++A+I L + + I
Sbjct: 285 FSGKVIRFFMLSAHYRKPMNFSDAELSQAKIALERIENSLIRAHEISETSIALEGSAGVE 344
Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA---- 389
+ A+ D NT AI + +L RE K N + I +A
Sbjct: 345 LKKALEDTKGKFIEAMDEDFNTAQAIGVIFELVRELNKTLDSSYNQEAYVIVKETADYLY 404
Query: 390 ----HILGIEVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGIEV E +N++ +E +++ R K ++ +D IR +L G ++D
Sbjct: 405 HILYDVLGIEVEVETKVENLTVDLVEFILELRREARAEKNWALSDRIRDRLAELGIQIKD 464
Query: 445 YKNPDNGQRMTRWKQ 459
K+ T W+
Sbjct: 465 GKDS------TTWRV 473
>gi|24111894|ref|NP_706404.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30062010|ref|NP_836181.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|61216306|sp|Q83M27|SYC_SHIFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|24050695|gb|AAN42111.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 301]
gi|30040254|gb|AAP15987.1| cysteine tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|313646855|gb|EFS11312.1| cysteinyl-tRNA synthetase [Shigella flexneri 2a str. 2457T]
gi|332761515|gb|EGJ91797.1| cysteinyl-tRNA synthetase [Shigella flexneri 2747-71]
gi|332768439|gb|EGJ98623.1| cysteinyl-tRNA synthetase [Shigella flexneri 2930-71]
Length = 461
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|125624812|ref|YP_001033295.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
MG1363]
gi|187629844|sp|A2RMS1|SYC_LACLM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|124493620|emb|CAL98607.1| CysS protein [Lactococcus lactis subsp. cremoris MG1363]
gi|300071611|gb|ADJ61011.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 448
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 157/463 (33%), Positives = 240/463 (51%), Gaps = 30/463 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT R++ +FQ I+P ++MYVCGPTVY++ H+GNAR ++ FD++ + L + E
Sbjct: 1 MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDKII+ A E+ S ++ + F +DT L + P+
Sbjct: 60 -VEYISNFTDVDDKIIKAAASENIST------KELSERYIAAFYEDTDLLNVKRASQNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI IQ ++ +AY + ++ F + +Y + + + + G
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKDYAKLANKNLADLLAGASGRTDEE 172
Query: 185 KKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
DF LWK E W++PWG GRPGWHIECS MS+ LG+ DIHGGG DL
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHH NEIAQS +K N W+HNGF+N++G KMSKS GNF T++ELL +
Sbjct: 233 FPHHTNEIAQSEAKTG-QKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELL-------QV 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPA 350
++R + THYR P++FT LTEAE + K
Sbjct: 285 VDPQILRFFLTTTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
++A+ D N + + + K + + +L I K + +++ IE
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGIKFEIEQSLDSEIE 404
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+++ER + +++ F+ +D IR L+++G +LED K+ R
Sbjct: 405 AMIEERQLAREVRDFAKSDEIRDALKAQGIVLEDTKDGVRWHR 447
>gi|76787565|ref|YP_328938.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77410936|ref|ZP_00787292.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
gi|109894950|sp|Q3K3G5|SYC_STRA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|76562622|gb|ABA45206.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77162991|gb|EAO73946.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae CJB111]
Length = 447
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 240/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ + MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + K F++D L T P
Sbjct: 61 --VNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I ++ ++ AYEAN ++ F S +Y + + +++ ++G
Sbjct: 113 RVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG+GRPGWHIECS M++ G DIHGGG DL
Sbjct: 173 EGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEIFGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
S VIR + YR+P++FT + + +AE+ L T A
Sbjct: 285 SVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + ++A+ H + F I GI +E +
Sbjct: 345 FQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R + F++AD IR +L +G L D K+ R
Sbjct: 401 DIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTR 446
>gi|257058375|ref|YP_003136263.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256588541|gb|ACU99427.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 484
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 171/504 (33%), Positives = 257/504 (50%), Gaps = 68/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ + ++ IRMY CG TVYD+ H+G+AR +V+DV+ R L++
Sbjct: 1 MTLTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI+ RARQE + + ++ + + + +D RL
Sbjct: 61 E--VQYIQNFTDIDDKILNRARQEGTT------MEAVSDRFIEAYFEDMERLHVQKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + L+ + G+AY++N ++ + +YG S RK+++ +
Sbjct: 113 PRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVE 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ PE KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 VQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + +EG KMSKS GNFITI +LL+
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
+RL +L HYR+P+DFT + L A
Sbjct: 289 ----KVDPMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTAS 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
P + + A+ +D N + L ++A+E K ++L
Sbjct: 345 PPHPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGHTETSPQVLEE 404
Query: 383 --PIFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A +LG+ EV +E N IE+L+++R I + K ++ D +R +L
Sbjct: 405 QWRTLVELAGVLGLETDISEVQEEVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDEL 464
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+++G IL D +T W +
Sbjct: 465 KNQGIILVDQPGG-----ITTWHR 483
>gi|166365576|ref|YP_001657849.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|189082070|sp|B0JJL5|SYC_MICAN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166087949|dbj|BAG02657.1| cysteinyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
Length = 480
Score = 378 bits (970), Expect = e-102, Method: Composition-based stats.
Identities = 161/499 (32%), Positives = 248/499 (49%), Gaps = 62/499 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F + P + MY CG TVYD+ H+G+AR +V+DV+ R L Y
Sbjct: 1 MTLILYNTLSRREEPFTPLIPGIVSMYCCGITVYDYCHLGHARTCVVWDVVRRYLEYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDKI+ RA+ EH + ++ + + + + +D +L
Sbjct: 61 --KVRYIQNFTDIDDKILNRAKNEHTT------MAAVAERFIEAYFEDMAKLGVRPADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + L+ + G+AY ++ ++ + +YG S RK+D+ + G +
Sbjct: 113 PRATHTLDGIKRLVYELEQKGYAYPSDGDVYYSVRRFSDYGKLSGRKLDDLQAGASGRVE 172
Query: 183 YHK------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++P DF LWK + EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 TDDPEAIKKQDPFDFALWKGAKSGEPSWDSPWGQGRPGWHIECSAMVKEQLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A+ W+HNG + + G KMSKS GNFITI ELL
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLAHYWLHNGMVKVAGEKMSKSLGNFITIRELLA--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------PQTSTS 343
+ +RL +L YR+PIDF+ + L A + +
Sbjct: 289 ----KYDPLAVRLLILGAQYRKPIDFSDEGLQAATNGWHTLQEGLSFGYKHLPPDNPAIT 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFN 386
++ A+ +D N + L ++A+E K + L
Sbjct: 345 DQELENRFQEAVNHDFNFAGGLAVLFEIAKELRKEGNNLTHAGKTDSNLAQLAVKWHTLV 404
Query: 387 ASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ +LG+E+ + + IE L+Q+R K K ++ +D IR +L+++G
Sbjct: 405 KLSRVLGLEMAADQGETPVSEGISAADIENLIQQRTEAKKAKNYAESDRIRAELKAQGIT 464
Query: 442 LEDYKNPDNGQRMTRWKQK 460
L D +T+W ++
Sbjct: 465 LIDQPGG-----VTKWLRE 478
>gi|301020339|ref|ZP_07184446.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
gi|300398784|gb|EFJ82322.1| cysteinyl-tRNA synthetase [Escherichia coli MS 69-1]
Length = 461
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMITEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|323126489|gb|ADX23786.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 447
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 234/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLREFVPLTEKTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 60 -RVNYISNFTDVDDKIIKAAAQAGVS------PKELSDRFIAAFMEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I +Q +I G AYE ++ F +Y + + + E ++G
Sbjct: 113 RVMDYMTEIISFVQVLIEKGFAYEVAGDVYFRVEKSEHYAQLANKTLSELEVGASGRTDV 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETSLKENPLDFALWKSAKTGEVSWDSPWGSGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPA 350
V+R + YR+PI+FT + + +AEI L T A
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETANEQELKRFVTA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + +A+ + F + GI +E +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGFYTGMVKEAFEKILAVFGIVFEEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|332685571|ref|YP_004455345.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
gi|332369580|dbj|BAK20536.1| cysteinyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
Length = 469
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 174/493 (35%), Positives = 245/493 (49%), Gaps = 62/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I IYNTL RK F I+ + +RMYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 1 MITIYNTLTRKKEPFIPIEENKVRMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TDIDDKII A++ + ++S+ F +D+ L T P
Sbjct: 60 -TVNYVSNFTDIDDKIIRAAKEMKITAE------AVSSRFIHAFEEDSNALNIQPATCHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R HIP ++ IQ +I G+AYEA ++ + T YG S + ID+ ++G
Sbjct: 113 RVMTHIPDILAFIQQLIEKGYAYEAQGDVYYRTYKFKQYGELSHQSIDDLEIGASQRTGE 172
Query: 184 HK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ ++P DF LWK++ P E W+SPWG GRPGWHIECS M+ +LG+ DIHGGG DL
Sbjct: 173 ERSLKEDPLDFALWKKAKPGEISWDSPWGAGRPGWHIECSVMAMKHLGETIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS + N W+HNG++ + KMSKS GNF+T++EL+
Sbjct: 233 EFPHHENEIAQSEAQSG-KTFVNYWMHNGYVTVGENDEKMSKSLGNFVTVHELI------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
++ V+R M T YR PI ++ + EA L + +
Sbjct: 286 -QTIDPQVLRFFMSTTQYRHPIHYSQTTIKEAASNLKRLQNAFNNLTFRKNDTLEQLTED 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ + A+ +D NT + I +++LA+ + + F
Sbjct: 345 ENDLETLNLFKGQFIQAMDDDFNTANGITIVYELAKWMNLYSERKAVSKKVIEKTLTYFT 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I GI E L I I++L+ ER K F +D IR L +G +LED K
Sbjct: 405 QWLAIFGIFFSSEVL---IDQDIDQLINEREQARKEGNFGRSDEIRDLLNQQGIVLEDTK 461
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 462 ------QGTRWRR 468
>gi|159044247|ref|YP_001533041.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
gi|187629812|sp|A8LLR2|SYC_DINSH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157912007|gb|ABV93440.1| cysteinyl-tRNA synthetase [Dinoroseobacter shibae DFL 12]
Length = 458
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 205/459 (44%), Positives = 272/459 (59%), Gaps = 25/459 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++K+ NT R+ F IDP N+RMYVCGPTVYD AH+GNARP +VFD+L+R+LR YG
Sbjct: 5 ELKLTNTKTRRKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPAVVFDMLFRVLREVYGP 64
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ VTYVRNITD+DDKI RA + S I IT + T +++D L L PTH P
Sbjct: 65 EHVTYVRNITDVDDKINARAAETGRS------IREITDETTGWYLEDMAALGTLPPTHVP 118
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +IPQM+ +I+ +I GHAY A ++FD S YG+ S R +D+ G RV
Sbjct: 119 RATEYIPQMVAMIETLIARGHAYVAEGHVLFDVRSYGAYGALSGRSVDDMIAGARVEVAP 178
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL FP
Sbjct: 179 YKRDPMDFVLWKPSEAGLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLQFP 238
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA A +W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 239 HHENEIAQSCCAHPEGGFAKVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 292
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYNDLN 360
VIR L THY +P+D+T ++ EA +L KW + P+V++AL +DLN
Sbjct: 293 GEVIRFVFLGTHYSKPMDWTERKRDEAMAVLRKWRAAVAGTRPAPAAAPSVMAALVDDLN 352
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-----CKEHLNKNISIAIEKLVQE 415
T AI LH+L R+ LP ASA ++G+ ++S +L +
Sbjct: 353 TPGAIAELHQLYRDGN-----LPGLLASAQLMGLLSDEMGGWDSSPQVDLSELAARLAEV 407
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R + K F+ D ++ L + G + K
Sbjct: 408 REAAIGTKDFTQVDRMKAALIAAGVEVRMSKAGVELVPG 446
>gi|194468084|ref|ZP_03074070.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
gi|194452937|gb|EDX41835.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri 100-23]
Length = 470
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 165/493 (33%), Positives = 251/493 (50%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 1 MLTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F++DT + T P
Sbjct: 60 -KVNYVSNFTDVDDKMIKAAAEQGITVP------QLAEKYINAFMEDTAAINIEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I ++I +Q +I G+AY + ++ + +YG S + +D+ ++G
Sbjct: 113 RATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSA 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIH GG D
Sbjct: 173 DEVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT++E++
Sbjct: 233 LEFPHHENEIAQSEAETG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M T YR PI ++ LT A+ L+ +
Sbjct: 287 --KEVDPQVLRFFMATTQYRRPIQYSQANLTAAQNNLNHIQTAFDNLTYREQDADEGDVQ 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++A+ +D+N + I +++L + + +
Sbjct: 345 GVTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVNLGAIQAIKKELVE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + N+ I++L++ER + K K F+ +D IR L+ +G ILED
Sbjct: 405 LMSIFGVKL-EASDNQINDEKIKQLIEERNVARKNKDFARSDEIRDNLKKQGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 462 ----PQGTRYKKE 470
>gi|148543540|ref|YP_001270910.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
gi|184152946|ref|YP_001841287.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri JCM 1112]
gi|227363504|ref|ZP_03847624.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
gi|189082068|sp|A5VI99|SYC_LACRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558714|sp|B2G5S5|SYC_LACRJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148530574|gb|ABQ82573.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri DSM 20016]
gi|183224290|dbj|BAG24807.1| cysteinyl-tRNA synthase [Lactobacillus reuteri JCM 1112]
gi|227071441|gb|EEI09744.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri MM2-3]
Length = 470
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 166/493 (33%), Positives = 252/493 (51%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 1 MLTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F++DT + T P
Sbjct: 60 -KVNYVSNFTDVDDKMIKAAAEQGITVP------QLAEKYINAFMEDTAAINIEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I ++I +Q +I G+AY + ++ + +YG S + +D+ ++G
Sbjct: 113 RATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSA 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIH GG D
Sbjct: 173 DEVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT++E++
Sbjct: 233 LEFPHHENEIAQSEAETG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M T YR PI ++ LT+A+ L+ +
Sbjct: 287 --KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQ 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++A+ +D+N + I +++L + + +
Sbjct: 345 EVTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + N+ I++L++ER I K K F+ +D IR L+ +G ILED
Sbjct: 405 LMSIFGVKL-EASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 462 ----PQGTRYKKE 470
>gi|325496424|gb|EGC94283.1| cysteinyl-tRNA synthetase [Escherichia fergusonii ECD227]
Length = 461
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNQMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|299821033|ref|ZP_07052921.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
gi|299816698|gb|EFI83934.1| cysteine--tRNA ligase [Listeria grayi DSM 20601]
Length = 473
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 172/487 (35%), Positives = 251/487 (51%), Gaps = 51/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL R+ F+ + + MYVCGPTVY++ HIGNARP+I FD + R L Y
Sbjct: 1 MALQLFNTLTREKEVFKPLVNGKVSMYVCGPTVYNYIHIGNARPIIFFDTVRRYLTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I A + ++P + K F +D +L T
Sbjct: 61 D--VNYVSNFTDVDDKLIRAAEELDLTVP------EVADKFIHAFFEDVDQLNVARATTN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I IQ ++ G+AYE+ ++ F T YG S + + + + G RV
Sbjct: 113 PRVTENMQEIIDFIQALVDKGYAYESAGDVYFATKKFDAYGKLSHQPLQDLQHGIRVETT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESPWG+GRPGWHIECSAM+ +LG DIH GG DLIF
Sbjct: 173 DKKRDELDFTLWKAAKPGEINWESPWGKGRPGWHIECSAMAQKFLGDTIDIHAGGHDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS ++ AN W+HN FLN++G KMSKS GNFIT++++L
Sbjct: 233 PHHEDEIAQSEARTG-KQFANYWMHNAFLNIDGEKMSKSLGNFITLHDVLAEHA------ 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+R ML HYR PI + L +A+ L + +
Sbjct: 286 -PDVVRFFMLSVHYRNPISLSEDTLEDAKNSLERLRTAYQNIDYRIQHAEEDVADEETTE 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ + + +D NT +AI H+LA+ + + L +
Sbjct: 345 DWLEQLTELKQSFEDEMDDDFNTANAITVFHELAKRANIYLAEEDVSITVLREFLSMLQL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A++LG+++ E + IE L++ERL + F AD IR+ L SK ILED +
Sbjct: 405 FANVLGLKLETEQAFELADEEIEALIEERLKARNERNFERADEIRELLRSKHIILEDTAH 464
Query: 448 PDNGQRM 454
+R
Sbjct: 465 GTRFKRG 471
>gi|239906952|ref|YP_002953693.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|259511829|sp|C4XSW5|SYC_DESMR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|239796818|dbj|BAH75807.1| cysteinyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 485
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 176/499 (35%), Positives = 244/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNT+ R F + P + MYVCG T YD HIG+AR +VFDVL R LR+ +
Sbjct: 1 MQLYNTMTRTKEPFVSRVPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHIGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII++A E + I + F +D +L L P +P+
Sbjct: 60 -VTFVRNFTDVDDKIIKKANAEGTTS------QEIAERYIATFYEDMDKLGILRPNAEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +I +M L Q +I GHAY ++ F S YG S R +++ + G RV
Sbjct: 113 ATEYIGEMASLAQRLIDSGHAYRTPSGDVYFRVRSFAGYGKLSGRDVEDMRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK S P EP WESP+G GRPGWH+ECSAMS LG DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSAMSEKLLGMPIDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E W+HNGF+ + KMSKS GNFITI ++ +
Sbjct: 233 HHENEIAQSEAAIGGE-FCRYWVHNGFVRINTEKMSKSLGNFITIRDIYAR-------YL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
V+R +L + YR P+D++ Q L EAE + +
Sbjct: 285 PEVLRFFLLSSQYRSPLDYSDQGLDEAEKGIKRIYAAKVQMEQALGRAKWSETKLPADVT 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
+ +A+ +DLNT A+ + L R + + + +L F
Sbjct: 345 EELSRHEEGFTAAMDDDLNTAQAMGHVFGLVRLAGRLMEDKTLAKSRETAEVLGRILADF 404
Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A +LG ++ C+ + ++ LV ER K K F+ +D IR
Sbjct: 405 GVWAEVLGVFGTDATAFLADLKACRLTRLGIDAARVDGLVAERQDARKAKDFARSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L S G + D
Sbjct: 465 ELASLGVTVMDTPTGPQWD 483
>gi|206890680|ref|YP_002249765.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|226735066|sp|B5YID4|SYC_THEYD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|206742618|gb|ACI21675.1| cysteinyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 487
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 195/507 (38%), Positives = 258/507 (50%), Gaps = 73/507 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL K+ EF+ I+ + +Y CG TVYD HIG+AR +VFDV+ + LRY E
Sbjct: 1 MRVFNTLTDKLEEFKPINDKKVGIYACGVTVYDLCHIGHARSAVVFDVIVKYLRYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDKII RA +E S I K T ++ KD RL +P+
Sbjct: 60 -VKFVKNFTDIDDKIINRANKEGVS------WKEIAEKYTGEYYKDMDRLGITRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE----ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
AT HI +MI +IQ +I G+AYE + F P YG S++KIDE G RV
Sbjct: 113 ATEHINEMIEIIQTLINKGYAYEIEEGQAKSVYFSVEKFPQYGKLSKKKIDELISGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG+ FDIHGGG DL
Sbjct: 173 VDERKKSPLDFALWKASKPGEPWWDSPWGKGRPGWHIECSAMSIKYLGETFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS + A WIHNGF+ + KMSKS GN + I +LL+
Sbjct: 233 IFPHHENEIAQSEAFTG-KPFAKYWIHNGFVTINKEKMSKSLGNVLNIRDLLDI------ 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
+ A +RL +L +HYR PI+F + + EAE + + T
Sbjct: 286 -YDAEALRLFLLSSHYRSPIEFAHEYIKEAEATVDRVYSTIMRIEDFEKIEINDKSSIEF 344
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
+ P A+ +D NT A+ L + +E + D P
Sbjct: 345 DKVKAMLENLKPEFEKAMDDDFNTAKALGILFEFIKEINRFMDKKPSQNKEIDFLVTAKR 404
Query: 384 IFNASAHILGI----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+L + ++ K I +L++ER K K + AD IR+
Sbjct: 405 AIKEIGSVLNLFQRQPVDWYRDLLKVKKIAIKEEEINRLIKERTEARKNKDWKKADSIRE 464
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQK 460
QL SKG ILED + T WK K
Sbjct: 465 QLLSKGIILEDKPD------RTIWKVK 485
>gi|218245339|ref|YP_002370710.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|226735051|sp|B7JUH4|SYC_CYAP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218165817|gb|ACK64554.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 8801]
Length = 484
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 169/504 (33%), Positives = 255/504 (50%), Gaps = 68/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ + ++ IRMY CG TVYD+ H+G+AR +V+DV+ R L++
Sbjct: 1 MTLTVYNTLTRRKEPLETLETGKIRMYCCGITVYDYCHLGHARTCMVWDVVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI+ RARQE + + ++ + + + +D L
Sbjct: 61 E--VQYIQNFTDIDDKILNRARQEGTT------MEAVSDRFIEAYFEDMEHLHVQKADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + L+ + G+AY++N ++ + +YG S RK+++ +
Sbjct: 113 PRATHTLNGIKRLVSELEAKGYAYQSNGDVYYSVRHFKDYGKLSGRKLEDLQAGASGRVE 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ PE KK+P DF +WK + P EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 VQDPEAAKKKDPFDFAVWKAAKPGEPSWDSPWGQGRPGWHIECSAMVRERLGETIDIHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS A + A W+HNG + +EG KMSKS GNFITI +LL+
Sbjct: 233 GSDLIFPHHENEIAQSEAATG-KPLARYWLHNGMVKVEGEKMSKSLGNFITIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
+RL +L HYR+P+DFT + L A
Sbjct: 289 ----KVDPMAMRLFILQAHYRKPVDFTDEALEAATNGWHTLKEGLLFGYNHGKQLNFTAS 344
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
P + + A+ +D N + L ++A+E K ++L
Sbjct: 345 PPHPLTSSPLTQRFQQAVDDDFNFAGGLAILFEIAKELRKEGNILVHQGQTETSPQVLEE 404
Query: 383 --PIFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A +LG+ EV + N IE+L+++R I + K ++ D +R +L
Sbjct: 405 QWRTLVELAGVLGLETDISEVQEAVGNGLSDAEIEELIEQRKIARQNKNYAEGDRLRDEL 464
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+++G IL D +T W +
Sbjct: 465 KNQGIILVDQPGG-----ITTWHR 483
>gi|22536391|ref|NP_687242.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|77405339|ref|ZP_00782434.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|30316157|sp|Q8E1Z4|SYC_STRA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|22533218|gb|AAM99114.1|AE014201_12 cysteinyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|77176017|gb|EAO78791.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae H36B]
Length = 447
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 241/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ + MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + K F++D L T P
Sbjct: 61 --VNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I ++ ++ AYEAN ++ F S +Y + + +++ ++G
Sbjct: 113 RVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG+GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
S VIR + YR+P++FT + + +AE+ L T A
Sbjct: 285 SVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + ++A+ H + F I GI +E +
Sbjct: 345 FQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEIFGIVFQEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R + F++AD IR +L +G L D K+ R
Sbjct: 401 DIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTR 446
>gi|320547739|ref|ZP_08042023.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
gi|320447499|gb|EFW88258.1| cysteine--tRNA ligase [Streptococcus equinus ATCC 9812]
Length = 448
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 157/467 (33%), Positives = 240/467 (51%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + EF I + + MYVCGPTVY++ HIGNAR ++ FD + R Y
Sbjct: 1 MTIKIYDTMTRSLREFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A + + K F++D L T
Sbjct: 61 --KVNYISNFTDVDDKIIKGAAEAGMDT------KAFSDKFIAAFMEDVKELGVEPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ ++I +++++ G AYEAN ++ F + NY + + +++ ++G
Sbjct: 113 PRVIEYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVD 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W+SPWG+GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 GEGDIKENPLDFALWKSAKPGEVSWQSPWGQGRPGWHIECSVMATSILGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ V+R + YR+P++FT + + +A + L T T
Sbjct: 285 KTVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPVGEVADAAELAKFKD 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ +D NT + I + +A+ + + F + GI +E +
Sbjct: 345 DFETAMDDDFNTANGITVIFDMAKWINSGNYDQTVKDTFAKMLAVFGIVFEEE----VLD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+E L+ +R + F++AD IR QL +G L D K+ R
Sbjct: 401 ADVEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKDGVRWTR 447
>gi|156934911|ref|YP_001438827.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
gi|156533165|gb|ABU77991.1| hypothetical protein ESA_02760 [Cronobacter sakazakii ATCC BAA-894]
Length = 479
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 177/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R I FDV+ R LR+
Sbjct: 19 MLKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGY- 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + + + + KD L L P +P
Sbjct: 78 -KLKYVRNITDIDDKIIKRANENG------EDFVALVDRMVTEMHKDFDALNILRPDSEP 130
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I GHAY A N +++F S +YG SR+ +++ + G RV
Sbjct: 131 RATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVA 190
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 191 DSKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 250
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 251 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 302
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 303 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVE 362
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L A +LG+ +
Sbjct: 363 AMNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQS 422
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
N + IE L+ +RL + +L G ILED
Sbjct: 423 GAQANDDEVAEIEALIVKRLEARKAKDWAAADAARD-----------RLNEMGIILED-- 469
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 470 ----GPQGTTWRRK 479
>gi|215485603|ref|YP_002328034.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
gi|254781678|sp|B7UKK3|SYC_ECO27 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|215263675|emb|CAS08007.1| cysteinyl-tRNA synthetase [Escherichia coli O127:H6 str. E2348/69]
Length = 461
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHD-GRYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|77413794|ref|ZP_00789974.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|77160156|gb|EAO71287.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 515]
Length = 447
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 158/466 (33%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ + MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + K F++D L T P
Sbjct: 61 --VNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I ++ ++ AYEAN ++ F S +Y + + +++ ++G
Sbjct: 113 RVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG+GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPA 350
VIR + YR+P++FT + + +AE+ L T A
Sbjct: 285 IVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLPIQENANDEELEQFVKA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + I + ++A+ H + I GI +E +
Sbjct: 345 FQEAMDDDFNTANGITVIFEMAKWINSGHYTSKVKETLAELLEIFGIVFQEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R + F++AD IR +L +G L D K+ R
Sbjct: 401 DIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRWTR 446
>gi|309797198|ref|ZP_07691594.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
gi|308119182|gb|EFO56444.1| cysteinyl-tRNA synthetase [Escherichia coli MS 145-7]
Length = 461
Score = 377 bits (969), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQLRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|237756267|ref|ZP_04584825.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
gi|237691568|gb|EEP60618.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium yellowstonense
SS-5]
Length = 487
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 177/508 (34%), Positives = 250/508 (49%), Gaps = 73/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL K +F I P +++Y CG TVYD+ H+G+ R +IVFD++ R LRY
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA+ E S+I+ K +++ D + +
Sbjct: 61 --NVIFVRNFTDVDDKIINRAKNECL------PFSVISDKFIKEYFDDAEKFRIEPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ ++ G+AYEA+ ++ F YG S+R IDE G R+
Sbjct: 113 PRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK + EP WESPWG+GRPGWH EC AM +LG+ DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A WIHNG + + G+KMSKS GN+IT+ E+ +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------ 356
++RL +L HYR P+DF+ ++ E + + +++ + +
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIEENFEGDLYN 344
Query: 357 --------------NDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA-- 389
+D NT A+ +L L RE D L + +A
Sbjct: 345 AVQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKALESYKEAAKT 404
Query: 390 ------HILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
I G+ + I+ L++ R K K+F+ AD I
Sbjct: 405 LHDIGRDIFGLFDSLQPCVKQEEIKAKEKEESINEDLIQVLIEAREKARKDKQFAIADLI 464
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R +L KG ILED T+WK+
Sbjct: 465 RDKLAEKGIILEDT------PFGTKWKK 486
>gi|218885586|ref|YP_002434907.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|226735052|sp|B8DKL0|SYC_DESVM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218756540|gb|ACL07439.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 485
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 177/499 (35%), Positives = 245/499 (49%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK F+ P + MYVCG T YD HIG+AR +VFDVL R LR+ +
Sbjct: 1 MQLYNTLTRKKEHFEPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ RN TD+DDKII RA QE + + K F +D RL L +PR
Sbjct: 60 -VTFARNFTDVDDKIITRANQEGLTS------QEVAEKYIATFYEDMDRLNVLRADLEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +MI L +I AY + ++ F + P YG S R +D+ + G RV
Sbjct: 113 ATTHIEEMISLCVRLIEQDKAYATPSGDVYFRVRAFPGYGKLSGRDVDDLRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG GRPGWHIECSAMS +L DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A + W+HNGF+ + KMSKS GNF TI ++LE ++
Sbjct: 233 HHENEIAQTEAALG-KDFVRYWVHNGFVQVNAEKMSKSLGNFRTIRDILE-------NYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
+R +L HYR PIDFT + + EAE L + + +
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFESMDEAEKNLKRIYEALGLLHAELEREKWTSGPLPKDVT 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAH-- 390
+ A A+ +D+NT +A+ + + R + + D F A
Sbjct: 345 EEFEGLRQAFADAMEDDMNTAAALGHVFTMVRLANRILDNKGQRKTEGARAFFRAVLDEA 404
Query: 391 -----ILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG + C+ +E+L+Q R+ K F+ AD IR
Sbjct: 405 ATWFAVLGVFGREPAGFLAELRACRVARKGIDPAKVEELLQARINARADKDFARADAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
++ + G + D +
Sbjct: 465 EIAALGIEVRDTPSGAVWD 483
>gi|121602424|ref|YP_988796.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
gi|187629794|sp|A1US43|SYC_BARBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120614601|gb|ABM45202.1| cysteinyl-tRNA synthetase [Bartonella bacilliformis KC583]
Length = 500
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 219/503 (43%), Positives = 301/503 (59%), Gaps = 51/503 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ YNTL RK +F ID S +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ YG+
Sbjct: 3 NLRFYNTLTRKKEDFIPIDSSKVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVYGK 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RN+TD+DDKI RA +E+P + +NDAI +T + QF +DT L CL PT+QP
Sbjct: 63 DHVIYARNVTDVDDKINARAIREYPKLTLNDAIHQLTERTYDQFQQDTEALGCLLPTYQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ +M LI+ ++ GHAY A N ++F + P YG F++R ++E K G RV
Sbjct: 123 RATDHLEEMRSLIERLLEKGHAYIAENHVLFSVNSIKNNPLYGVFAKRSLNEMKAGARVD 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM--------------S 223
+K++ DF+LWK ST EPGW+SP G GRPGWHIECSAM
Sbjct: 183 VAPYKRDDMDFVLWKPSTQQEPGWKSPAGISVLGRPGWHIECSAMSMAKLLTPYGGGLAC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
VFDIHGGG+DLIFPHHENEIAQSC E+ AN W+HNGFL +EGRKMSKS G
Sbjct: 243 DDLSVNVFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGRKMSKSFG 302
Query: 284 NFITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NFITI +LE+ +SW R +ML THYREP+++T QRL ++ L
Sbjct: 303 NFITIRSILESNFVEFSNAMTDDLKQSWAGLSARFSMLQTHYREPLNWTAQRLAQSSSEL 362
Query: 335 SKWPQTSTSK-------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+W + + G+ID +++S L +DLNT ++ L K +E
Sbjct: 363 YRWYELLRCERSCLDNGGVIDASLISTLSDDLNTPNSFTLLRKFYKEEN-----AVALVQ 417
Query: 388 SAHILGIEVCKEHLN----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ G+ + S I++ + ERL+ ++ K++++AD IR +L
Sbjct: 418 GMDLFGLLRQEWVREIECPLFVKGIDLDSKFIDQRIAERLLFIQNKEWAAADEIRNELAK 477
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
KG L+D K+ G+R+T W+ K
Sbjct: 478 KGIALKDEKDSQTGERITTWEVK 500
>gi|313157407|gb|EFR56830.1| cysteine--tRNA ligase [Alistipes sp. HGB5]
Length = 491
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 164/498 (32%), Positives = 251/498 (50%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ +YNTL R+ EF+ + P + MYVCGPTVY H+G+ARP + FD+L+R L+
Sbjct: 1 MESKLVLYNTLTRRKEEFEPLTPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAC 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + T+++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVAHYYTERYHRA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L P+ +P A+ HI + I ++ I+ G AYE+N + FD NYG S
Sbjct: 113 MEALNVETPSIEPYASGHIIEQIEFVKKILADGFAYESNGSVYFDVEKYNRKYNYGRLSG 172
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K++ DF LWK+++P W SPW G PGWH+ECSAMS+
Sbjct: 173 RNLDDIVANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWSEGFPGWHMECSAMSTR 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS A + A W+HN + + G+KM KS GNF
Sbjct: 233 YLGERFDIHGGGMDLMFPHHECEIAQSTAALGHDS-ARYWVHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL K +++ IR +L YR +DF+ + L AE L + + +
Sbjct: 292 ITLEELFTGSHKLLAQAYSPMTIRFFVLQAQYRSTLDFSNEALQAAEKGLDRLMKGVEAL 351
Query: 345 G-------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF------ 385
G ++ +A+ +DLN+ I AL R + +
Sbjct: 352 GRIKPADVSTVNPAELEERCRAAMDDDLNSPMVISALFDWVRVINQLAEGRQTITAADLE 411
Query: 386 -------NASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ ILG+ K + + ++ +E L+ ERL K ++++D IR
Sbjct: 412 TLKTTVRRYAFDILGLRDEKAAGSASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDG 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + G ++D K+ + +
Sbjct: 472 LAAAGIRVKDRKDGSDWE 489
>gi|308171985|ref|YP_003918690.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|307604849|emb|CBI41220.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|328551795|gb|AEB22287.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|328910056|gb|AEB61652.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
Length = 466
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 161/489 (32%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL RK F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P ++ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------VSERFIKAYFEDVGALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + +I G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
++R ML HYR PI+++ + L + + ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDDEWL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I+ A+ +D NT +AI LA+ + + +F+
Sbjct: 345 AKIEEHRTAFEEAMDDDFNTANAISVWFDLAKLANYYMQEDNTADHVIKAFISMFDRIGS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + +E L +L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGLTLGEEELVDEEIE---ELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|110640787|ref|YP_668515.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
gi|123344273|sp|Q0TKB5|SYC_ECOL5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110342379|gb|ABG68616.1| cysteinyl-tRNA synthetase [Escherichia coli 536]
Length = 461
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHD-GLYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|82775639|ref|YP_401986.1| cysteinyl-tRNA synthetase [Shigella dysenteriae Sd197]
gi|109894938|sp|Q32JL0|SYC_SHIDS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|81239787|gb|ABB60497.1| cysteine tRNA synthetase [Shigella dysenteriae Sd197]
Length = 461
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 249/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFNALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVVDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNTMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|41203|emb|CAA39691.1| cysteine-tRNA ligase [Escherichia coli K-12]
Length = 461
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVAMVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A + + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAAVERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|149002271|ref|ZP_01827213.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
gi|237650136|ref|ZP_04524388.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
gi|237821667|ref|ZP_04597512.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
gi|147759586|gb|EDK66577.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
Length = 447
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 230/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGVT------PQEVADKYIAAFREDVAALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKDFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|148983973|ref|ZP_01817292.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
gi|148992298|ref|ZP_01822021.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|149010789|ref|ZP_01832160.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|168482827|ref|ZP_02707779.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|168488279|ref|ZP_02712478.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|168492751|ref|ZP_02716894.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|221231418|ref|YP_002510570.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225854126|ref|YP_002735638.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|225856294|ref|YP_002737805.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
gi|147765270|gb|EDK72199.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|147924120|gb|EDK75232.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP3-BS71]
gi|147928924|gb|EDK79936.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|172043769|gb|EDT51815.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|183573040|gb|EDT93568.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|183576856|gb|EDT97384.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|220673878|emb|CAR68383.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225723999|gb|ACO19852.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|225725363|gb|ACO21215.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae P1031]
gi|301799643|emb|CBW32201.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
gi|332074402|gb|EGI84878.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
gi|332203756|gb|EGJ17823.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
Length = 447
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|313672372|ref|YP_004050483.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939128|gb|ADR18320.1| cysteinyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 479
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 192/489 (39%), Positives = 263/489 (53%), Gaps = 61/489 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL + F ++ + +++YVCG TVYD+ HIG+AR IVFD + R L+Y +
Sbjct: 1 MLKIFNTLSGEKEVFTPLEDNKVKIYVCGVTVYDYCHIGHARSSIVFDTIRRYLKYKGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TD+DDKII+RA +E N +I+ IT + +D +L L P + P
Sbjct: 61 --VTFVKNFTDVDDKIIKRANEE------NKSINEITDFFIKAHDEDMDKLNILRPDYTP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I MI L + +I G AYE+N ++ F + +YG S+R +D+ G RV
Sbjct: 113 RATEYIDGMIKLCEKLIEKGFAYESNGDVYFKVRAFKDYGKLSKRDLDDLLAGARVDVNE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWKRS EPGW+SPWGRGRPGWHIECS MS+ LG FDIHGGG DLIFP
Sbjct: 173 IKEDPLDFALWKRSKEGEPGWDSPWGRGRPGWHIECSVMSAEILGIPFDIHGGGKDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A+ E A WIHNGF+N+ KMSKS GNF TI ++L +
Sbjct: 233 HHENEIAQSEAAEGKE-FARYWIHNGFVNINKEKMSKSLGNFFTIRDVL-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------SKGIIDP- 349
V+R +L THYR P+DF+ + L EAE L + KG ID
Sbjct: 285 PEVLRFFLLTTHYRSPLDFSFENLLEAENALDRIYTAIDELESAVFNNKKPAQKGKIDEI 344
Query: 350 ------AVLSALYNDLNTVSAIQALHKLAREST-----------------KNHDLLPIFN 386
++ +D NT SAI + +L + + ++ I
Sbjct: 345 VDRFKRDFEESMDDDFNTASAISNIFELIKGVNLLLSERLNSEDLNYLKVRFEEVKAIIR 404
Query: 387 ASAHILGIEV-----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LGI + ++KL++ER I + K FS AD IR +L++KG
Sbjct: 405 ---DVLGILTKTASEWFKMNLSIDESELQKLIEEREIARRNKDFSKADAIRNELKTKGVE 461
Query: 442 LEDYKNPDN 450
L D
Sbjct: 462 LLDTPTGTK 470
>gi|154684612|ref|YP_001419773.1| cysteinyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
gi|187629789|sp|A7Z0L6|SYC_BACA2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|154350463|gb|ABS72542.1| CysS [Bacillus amyloliquefaciens FZB42]
Length = 466
Score = 377 bits (968), Expect = e-102, Method: Composition-based stats.
Identities = 161/489 (32%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL RK F ++ ++MYVCGPTVY++ HIGNARP IV+D + L Y
Sbjct: 1 MTITLYNTLTRKKETFVPLEEGKVKMYVCGPTVYNYIHIGNARPAIVYDTVRNYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P ++ + + + +D L C
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------VSERFIKAYFEDVGALGCRKADLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++ +I + +I G+AYE+ ++ F T + YG S++ IDE + G R+
Sbjct: 113 PRVMENMDAIIEFVSELIKKGYAYESEGDVYFKTRAFEGYGKLSQQSIDELRSGARIRVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + E W+SPWG+GRPGWHIECSAM YLG DIH GG DL F
Sbjct: 173 EKKEDALDFALWKAAKDGEISWDSPWGKGRPGWHIECSAMVKKYLGDEIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N++ KMSKS GNF+ +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFAKYWLHNGYINIDNEKMSKSLGNFVLVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
++R ML HYR PI+++ + L + + ++
Sbjct: 285 DPQLLRFFMLSVHYRHPINYSEELLEKTKNAFNRLKTAYSNLNHRLISSTNLTDNDEEWL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I+ A+ +D NT +AI LA+ + + +F+
Sbjct: 345 AKIEEHRTAFEEAMDDDFNTANAISVWFDLAKVANYYMQEDNTADHVIKAFISMFDRIGS 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + +E L +L+++R + + F+ +D IR QL+S ILED
Sbjct: 405 VLGLTLGEEELVDEEIE---ELIEKRNEARRNRDFALSDQIRDQLKSMNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|330445515|ref|ZP_08309167.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328489706|dbj|GAA03664.1| cysteinyl-tRNA synthetase [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 460
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 175/496 (35%), Positives = 249/496 (50%), Gaps = 75/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ F I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCESLTERLIGEMHADFDALGMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L + +I G AY +N +++F+ S +YG S++ +D+ + G RV +
Sbjct: 113 RATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKFEDYGRLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 TAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+R ++ HYR ++++ + L +A L + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDTSVEAAGGEEFVARFKE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE K D+ A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKADDVAAASVLGARMRELADVLGLLSQEPETFLQG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYI--------------RKQLESKGFILED 444
+ IE L+Q+R + R +L + G ILED
Sbjct: 405 GAGEDDDVAEIEALIQQR--------------LDARAAKDWAAADEARDKLMAMGIILED 450
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 451 ------GAQGTTWRRK 460
>gi|145298606|ref|YP_001141447.1| cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
gi|142851378|gb|ABO89699.1| Cysteinyl-tRNA synthetase [Aeromonas salmonicida subsp. salmonicida
A449]
Length = 458
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 242/487 (49%), Gaps = 61/487 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLTRQKEEFKPIHPGKVGMYVCGVTIYDHCHIGHGRTFVAFDVVARYLRYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRN+TD+DDKII+RA + N +T + +D L + P +P
Sbjct: 61 L--NYVRNVTDVDDKIIKRAAE------TNVTCDDLTERLIGDMHQDFDALGMVRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L++++I HAY N +++F S +YG S + +++ + G RV
Sbjct: 113 RATQHISEIIELVESLIAQDHAYVADNGDVMFIVDSYADYGKLSGQDLEQLQAGARVGVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+S +LG FDIHGGG DL F
Sbjct: 173 DAKRNPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSKHLGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGD-YVNTWMHSGMVMVDKEKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
A +R ++ HYR ++++ L +A L + + A
Sbjct: 285 DAESVRYFLMSGHYRSQLNYSEDNLKQARAALERMYTALRDLPVAAAAGGDEQVARFVDA 344
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL----- 401
+ +D NT A AL L RE + L +LGI
Sbjct: 345 MDDDFNTPEAYSALFDLVREINRQKAEDMSVAAGLGARLRELGAVLGILQQDPDAFLKGD 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKF--------SSADYIRKQLESKGFILEDYKNPDNGQ 452
IE+L+ ER K + +L G +LED
Sbjct: 405 EADEEVAEIERLIAERNQARADKNWAAADAARA--------RLTEMGIVLEDS------A 450
Query: 453 RMTRWKQ 459
T W++
Sbjct: 451 GKTSWRR 457
>gi|16128510|ref|NP_415059.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|89107393|ref|AP_001173.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
W3110]
gi|170080109|ref|YP_001729429.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238899807|ref|YP_002925603.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|300949224|ref|ZP_07163257.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|300954345|ref|ZP_07166803.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|301022849|ref|ZP_07186685.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|135097|sp|P21888|SYC_ECOLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558631|sp|B1XGC4|SYC_ECODH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|259511830|sp|C4ZUX4|SYC_ECOBW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|20664375|pdb|1LI5|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664376|pdb|1LI5|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase
gi|20664379|pdb|1LI7|A Chain A, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|20664380|pdb|1LI7|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase With
Cysteine Substrate Bound
gi|56966182|pdb|1U0B|B Chain B, Crystal Structure Of Cysteinyl-Trna Synthetase Binary
Complex With Trnacys
gi|41206|emb|CAA41983.1| cysteinyl-tRNA synthetase [Escherichia coli K-12]
gi|145692|gb|AAA23658.1| transfer RNA-Cys synthetase [Escherichia coli]
gi|1773207|gb|AAB40279.1| cysteinyl-tRNA synthetase [Escherichia coli]
gi|1786737|gb|AAC73628.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
MG1655]
gi|85674663|dbj|BAE76303.1| cysteinyl-tRNA synthetase [Escherichia coli str. K12 substr. W3110]
gi|169887944|gb|ACB01651.1| cysteinyl-tRNA synthetase [Escherichia coli str. K-12 substr.
DH10B]
gi|238860697|gb|ACR62695.1| cysteinyl-tRNA synthetase [Escherichia coli BW2952]
gi|260450291|gb|ACX40713.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|299881060|gb|EFI89271.1| cysteinyl-tRNA synthetase [Escherichia coli MS 196-1]
gi|300318682|gb|EFJ68466.1| cysteinyl-tRNA synthetase [Escherichia coli MS 175-1]
gi|300451342|gb|EFK14962.1| cysteinyl-tRNA synthetase [Escherichia coli MS 116-1]
gi|315135208|dbj|BAJ42367.1| cysteinyl-tRNA synthetase [Escherichia coli DH1]
gi|323943145|gb|EGB39302.1| cysteinyl-tRNA synthetase [Escherichia coli E482]
gi|227964|prf||1714234A Cys-tRNA synthetase
Length = 461
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVAMVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|148988955|ref|ZP_01820355.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|147925452|gb|EDK76529.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
Length = 447
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 231/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ ++MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIENGKVKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ +G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|291515561|emb|CBK64771.1| cysteinyl-tRNA synthetase [Alistipes shahii WAL 8301]
Length = 491
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 248/498 (49%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K+ +YNTL R+ F+ + P + MYVCGPTVY H+G+ARP + FD+L+R L+
Sbjct: 1 MDSKLVLYNTLTRRKEVFEPLVPGRVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLKAS 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + T+++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVAHYYTERYHRA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L P+ +P A+ HI + I ++ I+ G+AYEAN + FD NYG S
Sbjct: 113 MDALNVETPSIEPYASGHIIEQIEFVKRILADGYAYEANGSVYFDVEKYNAKYNYGRLSG 172
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K++ DF LWK+++P W SPWG G PGWH+ECSAMS+
Sbjct: 173 RNLDDIVANTRELDGQSDKRHSYDFALWKKASPEHIMRWPSPWGEGFPGWHMECSAMSTR 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS A + A W+HN + + G+KM KS GNF
Sbjct: 233 YLGERFDIHGGGMDLMFPHHECEIAQSTAALGHDS-ARYWLHNNMMTVNGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ E +++ IR +L HYR +DF+ + L AE L + + +
Sbjct: 292 ITLEEFFTGSHPKLSQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKGIETL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF------ 385
G I P A+ +DLN+ I AL R + D
Sbjct: 352 GKIKPAEVSTVDPAELETRCAEAMDDDLNSPMVISALFDWVRTINQLADGSQTITAADLA 411
Query: 386 -------NASAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ ILG+ K + ++ +E L+ ERL K ++++D IR
Sbjct: 412 ALTATVRRYAFDILGLRDEKAAGTASGRDYVTPLVEMLLDERLKARAAKDWAASDRIRDG 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + G ++D K+ + +
Sbjct: 472 LTAAGIRVKDRKDGTDWE 489
>gi|327399102|ref|YP_004339971.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327181731|gb|AEA33912.1| cysteinyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 474
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 190/495 (38%), Positives = 262/495 (52%), Gaps = 60/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL +++ EF+ I + MYVCG TVYD HIG+AR + FDV+YR L++ +
Sbjct: 1 MLKIYNTLGKRLEEFKPIKNGKVGMYVCGVTVYDNCHIGHARSAVAFDVMYRYLKFKGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TD+DDKII RA +E S + I + ++ KD RL P +P
Sbjct: 61 --VTFVKNFTDVDDKIINRANEEGVS------CNEIAQRYIGEYYKDMYRLNIAKPEVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT HI ++I L++ + G+AYE N ++ + +YG S + IDE K G RV
Sbjct: 113 KATEHINEIIELVRKLQDMGYAYEVNGDVYYRVEKFKDYGKLSGKNIDELKSGARVEIND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWKRS EP W+SPWG GRPGWHIECSAMS YLG+ FDIHGGG DLIFP
Sbjct: 173 KKENPLDFALWKRSKENEPKWKSPWGEGRPGWHIECSAMSMKYLGESFDIHGGGEDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + A WIHNGF+ + KMSKS GNF TI ++L + +
Sbjct: 233 HHENEIAQSEAATG-KPFARYWIHNGFVRINKEKMSKSLGNFFTIKDIL-------KKYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------- 348
+R +L+THYR PIDF+ + L A+ L+++ +
Sbjct: 285 GQTLRYFLLLTHYRSPIDFSFEGLDAAKEALNRYYNFIQRLEDTEFEKNGKVDELLEKRL 344
Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFNASA 389
A+ D N AI + + + + D L N
Sbjct: 345 KDLLARFEEAMDEDFNAPKAIGEVFSVIKTFNQYLDSITEGDKPKKAYKETFLESMNKIK 404
Query: 390 HILGIEV---CKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LG+ + + I + +E+ +++R + K K + +AD IR +L KG ILED
Sbjct: 405 SVLGVFDTSSASWFIPEGIDVDWVEERIKQRALARKNKDYETADKIRDELNGKGIILEDA 464
Query: 446 KNPDNGQRMTRWKQK 460
K TRWK K
Sbjct: 465 KEY------TRWKVK 473
>gi|227545183|ref|ZP_03975232.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|300909140|ref|ZP_07126601.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
gi|227184829|gb|EEI64900.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri CF48-3A]
gi|300893005|gb|EFK86364.1| cysteine--tRNA ligase [Lactobacillus reuteri SD2112]
Length = 478
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 165/493 (33%), Positives = 253/493 (51%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 9 MLTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 67
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F++DT + T P
Sbjct: 68 -KVNYVSNFTDVDDKMIKAAAEQGITVP------QLAEKYINAFMEDTAAINIEPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I ++I +Q ++ G+AY + ++ + + +YG S + +D+ ++G
Sbjct: 121 RATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSA 180
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIH GG D
Sbjct: 181 DEVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQD 240
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT++E++
Sbjct: 241 LEFPHHENEIAQSEAETG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII----- 294
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M T YR PI ++ LT+A+ L+ +
Sbjct: 295 --KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQ 352
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++A+ +D+N + I +++L + + +
Sbjct: 353 EVTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVE 412
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + N+ I++L++ER I K K F+ +D IR L+ +G ILED
Sbjct: 413 LMSIFGVKL-EASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT-- 469
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 470 ----PQGTRYKKE 478
>gi|308050311|ref|YP_003913877.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
gi|307632501|gb|ADN76803.1| cysteinyl-tRNA synthetase [Ferrimonas balearica DSM 9799]
Length = 460
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 250/493 (50%), Gaps = 69/493 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL R+ F+ I P + MYVCG T+YD+ HIG+AR + FD + R LR +
Sbjct: 1 MLQIFNTLTRQKEAFKPIQPGKVGMYVCGVTIYDYCHIGHARTYVAFDTMVRYLRSQGLD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITD+DDKII RA + N++ + ++ T+ +D L L P +P
Sbjct: 61 --VTYVRNITDVDDKIIRRAAEN------NESCEALVARFTEAMYQDFDALNLLRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T H+ ++I +IQ ++ GHAY + ++ F+ + +YG SR+ +++ + G RV
Sbjct: 113 TVTGHMAEIIDIIQTLVNKGHAYVTDAGDVWFEVKTFDDYGKLSRQDLEQLQSGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK + P EP W SPWG GRPGWHIECSAM+ +LGKVFDIHGGG DL+F
Sbjct: 173 ESKRNPMDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMNGKHLGKVFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N W+H+G + + KMSKS NF TI E+L + +
Sbjct: 233 PHHENEVAQSCCAHDT-NYVNYWVHSGMVQVNKEKMSKSLNNFFTIREVL-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
A +R +L +HYR ++++ + L +A L + +
Sbjct: 285 QAESVRYFLLSSHYRSQLNYSEENLNQAHAALERLYTALRGVTPATELNLDNDHVARFQA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL--- 401
A+ +D NT A+ L LARE + L + ++G+
Sbjct: 345 AMNDDFNTAEALPVLFDLARELNITKEDGESEQAAQLAGLMRYLGGVMGLLEQAPEAFLQ 404
Query: 402 ---NKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKN 447
+ + IE L++ R + +L + G +LED
Sbjct: 405 GGGDDDEVAKIEGLIKARNDARASKDWAAADAARD-----------ELTAMGIVLED--- 450
Query: 448 PDNGQRMTRWKQK 460
G T W++K
Sbjct: 451 ---GAGGTSWRRK 460
>gi|300864454|ref|ZP_07109324.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
gi|300337549|emb|CBN54472.1| Cysteinyl-tRNA synthetase [Oscillatoria sp. PCC 6506]
Length = 483
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 177/499 (35%), Positives = 247/499 (49%), Gaps = 65/499 (13%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YN+L R++ + I+P +RMY CG TVYD H+G+AR I +DV+ R L + E
Sbjct: 4 KLYNSLTRRVEPLETIEPGKVRMYCCGVTVYDNCHLGHARSYIAWDVVRRYLTWRGYE-- 61
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N TDIDDKI+ RAR+E S + + + TQ + +D RL L PRA
Sbjct: 62 VRYVQNFTDIDDKILNRARKEGSS------MEEVAERYTQTYFEDMKRLNVLEADEYPRA 115
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ + + LI + G+AY + ++ + YG S RK DE + G +
Sbjct: 116 THTMDGIKRLIHELESKGYAYASGGDVYYKVRQFSEYGKLSGRKFDEMQAGASGRVESED 175
Query: 186 ------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+P DF LWK + EP W+SPWG GRPGWHIECSAM G DIHGGG D
Sbjct: 176 AEAQKKKDPFDFALWKGAKSGEPAWDSPWGSGRPGWHIECSAMVRQSFGDRIDIHGGGSD 235
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS + A W+HNG + + G KMSKS GNFITI ELL+
Sbjct: 236 LIFPHHENEIAQSEAVTG-QPLATYWLHNGMVKVNGEKMSKSLGNFITIRELLD------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------K 344
+ V+RL +L HYR+PIDFT + A+ + +
Sbjct: 289 KPTDPMVVRLFVLTAHYRKPIDFTDDAIASAQNGWNTINEGFLFGHEYGSQFGWKLALED 348
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIFNA 387
SA+ +D NT +A+ + +LA+E ++ ++L +
Sbjct: 349 KEAVQQFQSAMDDDFNTPNALAVVFELAKELRRDRNILIHGGKIETPGEVIQQKWHTLVS 408
Query: 388 SAHILGIEV-------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
H+LG+ + IE L+Q+RL K K F+ D IR +L+ +G
Sbjct: 409 LLHVLGLTNLVPASATLSADQSGLTDKDIEILIQQRLAARKAKNFAEGDRIRNELKDRGI 468
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
L D K+ T W +
Sbjct: 469 TLIDQKDGT-----TIWHR 482
>gi|182683526|ref|YP_001835273.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|303253920|ref|ZP_07340041.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|303260086|ref|ZP_07346059.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|303261270|ref|ZP_07347218.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|303263935|ref|ZP_07349856.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|303265926|ref|ZP_07351822.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|303268308|ref|ZP_07354105.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|182628860|gb|ACB89808.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|301801464|emb|CBW34156.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|302599096|gb|EFL66121.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|302637404|gb|EFL67891.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|302638781|gb|EFL69243.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|302642146|gb|EFL72496.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|302644510|gb|EFL74761.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|302646340|gb|EFL76566.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae BS397]
Length = 447
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 233/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|46579990|ref|YP_010798.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|61216247|sp|Q72BQ5|SYC_DESVH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|46449406|gb|AAS96057.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234011|gb|ADP86865.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 485
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 178/499 (35%), Positives = 246/499 (49%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYN+L R+ F P + MYVCG T YD HIG+AR +VFDVL R LR+ +
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ RN TD+DDKII+RA +E + + K F +D RL L +P+
Sbjct: 60 -VTFARNFTDVDDKIIKRANEEGLTS------QQVAEKYIDTFYEDMDRLNVLRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +MI L + +I G AY + ++ F S P YG S R ID+ + G RV
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWHIECSAMS ++ DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A + W+HNGF+ ++ KMSKS GNF TI ++LE +
Sbjct: 233 HHENEIAQTEAALD-KPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
V+R +L HYR PIDFT + EAE L + + +
Sbjct: 285 PEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERSRSKWSATPLPADVT 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASA--- 389
+D A AL +DLNT +A+ + R K+ + L +
Sbjct: 345 AEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLV 404
Query: 390 ----HILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ + + ++ L++ER + K F+ AD IR
Sbjct: 405 AKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G + D +
Sbjct: 465 ELAALGIEVRDTPSGAVWD 483
>gi|90423589|ref|YP_531959.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
gi|109894931|sp|Q216P6|SYC_RHOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|90105603|gb|ABD87640.1| cysteinyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
Length = 488
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 209/498 (41%), Positives = 288/498 (57%), Gaps = 55/498 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL ++ +F +DPSN+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 1 MALRLYDTLTKEKRDFAPLDPSNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKI +RA ++ P +P+N+AI +T + +QF D L CL PT +
Sbjct: 61 PDHVKYVRNITDVDDKINDRATRDFPGLPLNEAIRKVTEQTEKQFHDDVDALGCLRPTIE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-------PNYGSFSRRKIDEQKM 175
PRAT HI +M +I ++ G AY A + ++F ++ P YGS + R +DE
Sbjct: 121 PRATEHIGEMRSIIDRLVEGGFAYVAEDHVLFSPQAMNAADGILPRYGSLANRSLDEMIA 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP---WGRGRPGWHIECSAMSSHYLGKVFD 232
G RV +K++ DF+LWK S P EP W SP +GRPGWHIECSAM+ +LG+ FD
Sbjct: 181 GARVDVAPYKRDVTDFVLWKPSKPGEPSWPSPAGIATQGRPGWHIECSAMAWKHLGEKFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL+FPHHENE+AQSCCA ++ A W+HNGFL +EG KMSKS GNF+TI++
Sbjct: 241 IHGGGIDLVFPHHENEVAQSCCAFHTDRMATTWMHNGFLQVEGEKMSKSLGNFLTISDQR 300
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
+ W V+RL ML THYR+PID+T L+E L +W + S DP
Sbjct: 301 D-------QWGPAVLRLNMLKTHYRQPIDWTQHNLSETGRELDRWFEFLESASGGDPNDA 353
Query: 353 SAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL------- 401
+ + +DLNT +AI AL + + +LGI + +E +
Sbjct: 354 NDVMSALADDLNTSAAITALRVQFKNKNS-----AALRSGLDLLGIPIGREFIQGRKHVR 408
Query: 402 ---------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ I++L+ R K F +D IR QL + G
Sbjct: 409 LYAEGAFVAAGGGTATFSTASSSVERSDIQQLIDARAAARARKDFKESDRIRDQLAAMGV 468
Query: 441 ILEDYKNPDNGQRMTRWK 458
+L+D K+ D T W+
Sbjct: 469 VLKDGKDADGKP-TTTWE 485
>gi|187608842|sp|A7MK00|SYC_ENTS8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 461
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 177/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R I FDV+ R LR+
Sbjct: 1 MLKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------EDFVALVDRMVTEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I GHAY A N +++F S +YG SR+ +++ + G RV
Sbjct: 113 RATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DSKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDASATVAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L A +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
N + IE L+ +RL + +L G ILED
Sbjct: 405 GAQANDDEVAEIEALIVKRLEARKAKDWAAADAARD-----------RLNEMGIILED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|120602598|ref|YP_966998.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|187629811|sp|A1VDQ5|SYC_DESVV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120562827|gb|ABM28571.1| cysteinyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 485
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 178/499 (35%), Positives = 246/499 (49%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYN+L R+ F P + MYVCG T YD HIG+AR +VFDVL R LR+ +
Sbjct: 1 MQIYNSLSRRKELFTPAVPGKVNMYVCGITAYDLCHIGHARSAVVFDVLVRYLRHTGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ RN TD+DDKII+RA +E + + K F +D RL L +P+
Sbjct: 60 -VTFARNFTDVDDKIIKRANEEGLTS------QQVAEKYIDTFYEDMDRLNVLRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +MI L + +I G AY + ++ F S P YG S R ID+ + G RV
Sbjct: 113 ATGHILEMIALCEKLIAKGKAYATPSGDVYFRVRSFPEYGKLSGRDIDDMRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWHIECSAMS ++ DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPSWTSPWGEGRPGWHIECSAMSEKHMPLPLDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A + W+HNGF+ ++ KMSKS GNF TI ++LE +
Sbjct: 233 HHENEIAQTEAALD-KPFVRYWMHNGFVQVDAEKMSKSLGNFKTIRDILE-------GYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
V+R +L HYR PIDFT + EAE L + + +
Sbjct: 285 PEVLRFFLLTKHYRSPIDFTFDSMDEAEKSLKRIYEALSLARTERGRSKWSATPLPADVT 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASA--- 389
+D A AL +DLNT +A+ + R K+ + L +
Sbjct: 345 AEFDTLDRAFDEALEDDLNTAAALGHVFGTIRLVNRLLEDKNLRKSAETLALLERLDGLV 404
Query: 390 ----HILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ + + ++ L++ER + K F+ AD IR
Sbjct: 405 AKWMKVLGVFGREPEAFLSDLKECRIRRKGIDTTKVDALLEERKSVRAAKDFARADAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G + D +
Sbjct: 465 ELAALGIEVRDTPSGAVWD 483
>gi|283784327|ref|YP_003364192.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
gi|282947781|emb|CBG87337.1| cysteinyl-tRNA synthetase [Citrobacter rodentium ICC168]
Length = 461
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 176/494 (35%), Positives = 252/494 (51%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPSYGQLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKTVAPAGGEAFEARFID 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE KN D+ + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKNEDMAAANAMASHLRKISAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDGEVAQIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|281599852|gb|ADA72836.1| Cysteinyl-tRNA synthetase [Shigella flexneri 2002017]
gi|332763819|gb|EGJ94057.1| cysteinyl-tRNA synthetase [Shigella flexneri K-671]
gi|333021864|gb|EGK41112.1| cysteinyl-tRNA synthetase [Shigella flexneri K-304]
Length = 461
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 252/494 (51%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY A+N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNSDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNRMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|56808516|ref|ZP_00366253.1| COG0215: Cysteinyl-tRNA synthetase [Streptococcus pyogenes M49 591]
gi|209560085|ref|YP_002286557.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
gi|209541286|gb|ACI61862.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes NZ131]
Length = 447
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYIGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++E+L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|168485706|ref|ZP_02710214.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
gi|183571202|gb|EDT91730.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
Length = 447
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 233/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLRKFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F++AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFATADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|159899627|ref|YP_001545874.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159892666|gb|ABX05746.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 466
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 168/479 (35%), Positives = 235/479 (49%), Gaps = 45/479 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F + ++ MYVCGPTVY AHIG+A +VFDV+ R L +
Sbjct: 1 MALAIYNTLTRQTEPFTPLVADHVSMYVCGPTVYSDAHIGHAMSAVVFDVVRRYLEWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+DDKII RA ++ + T F+ +L L T
Sbjct: 61 --TVRHVMNFTDVDDKIIRRANEQGRD------PMELAESYTLAFLDQLGQLNVLPATAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + IPQ+I I+ +I AY +N ++ F + +YG SRR +D+ + G R+
Sbjct: 113 PRVSTTIPQIIQFIEGLIAKDAAYHASNGDVYFRVRADEDYGKLSRRAVDDMRSGARIAP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK + P EP WESPWG+GRPGWHIECSAMS H L + DIHGGG DLI
Sbjct: 173 DEAKDDPLDFALWKSAKPGEPAWESPWGQGRPGWHIECSAMSLHELAEQIDIHGGGNDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+ + A +W+HNG L L G KMSKS GN ITI++ L
Sbjct: 233 FPHHENEIAQTESLTG-KNFAQVWMHNGMLQLAGEKMSKSLGNLITIDQFLSEH------ 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
A ++RL +L YR P+ + + L + + L +
Sbjct: 286 -SADIMRLLVLSGSYRAPLVYNDEVLADTQRKLERIMSALKPAHGTATNGPVVETLNAIV 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+A+ +D N+ +A+ L L R D A +LG+
Sbjct: 345 AKAPADFRAAMDSDFNSAAALAVLFDLVRSINAARDAGVGGEPFAAGQARLRELAAVLGL 404
Query: 395 EVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +K + IE L++ R L K K+++ +D +R +L LED N
Sbjct: 405 RLEAPSASKTDAAPFIELLIELRAELRKAKQWALSDLVRNRLSELDVQLEDSPNGTTWT 463
>gi|194289323|ref|YP_002005230.1| cysteinyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|229558628|sp|B3R4D1|SYC_CUPTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|193223158|emb|CAQ69163.1| cysteine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
Length = 462
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 180/482 (37%), Positives = 254/482 (52%), Gaps = 45/482 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD+++R LR
Sbjct: 1 MQPLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VTYV+NITDIDDKII RA + + I +T++ Q +D L + P H
Sbjct: 61 YE--VTYVQNITDIDDKIIRRAVENG------ETIGELTTRFIQYMHEDAAALGVIRPDH 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+++PQM+ +I + G AY+ ++ ++ + YG S + +++ + G RV
Sbjct: 113 EPRATDYVPQMLDMIGKLEAKGLAYQASDGDVNYSVRKFDGYGKLSGKSLEDLRAGERVS 172
Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
K++P DF+LWK + EP W+S WG GRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 173 ANDAKQDPLDFVLWKSAKASEPPESKWDSKWGAGRPGWHIECSAMSCALLGEHFDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHENEIAQS A + N+W+HNGF+ + KMSKS GNF TI E+L
Sbjct: 233 ADLQFPHHENEIAQSEGASG-KPFVNLWMHNGFVRINDEKMSKSLGNFFTIREVL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGII 347
+++ A V+R +L HYR P++++ L +A L++
Sbjct: 287 --KAYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKDSQPGGCAVDWDEPH 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH----- 400
A+ +D NT A+ L LA E + A LG+ H
Sbjct: 345 AKRFAEAMGDDFNTPIAMSVLFDLASEINRTGSTAAARQLKGLAGTLGLLERDPHTFLQG 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IEKL+ R + F+ AD IR QL G +LED T W
Sbjct: 405 GKSADGPSPDEIEKLIAARKAAKAERNFAEADRIRAQLLEAGIVLEDKPGGA-----TEW 459
Query: 458 KQ 459
++
Sbjct: 460 RR 461
>gi|94989286|ref|YP_597387.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94993175|ref|YP_601274.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|94542794|gb|ABF32843.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94546683|gb|ABF36730.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
Length = 447
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDSEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|239618081|ref|YP_002941403.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239506912|gb|ACR80399.1| cysteinyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 458
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 169/471 (35%), Positives = 234/471 (49%), Gaps = 40/471 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I NTL K EF I P +R+YVCGPTVY+F H+GN+RP I FD R L Y
Sbjct: 1 MLRITNTLTGKKEEFIPITPGEVRIYVCGPTVYNFVHLGNSRPAITFDAFRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +N TDIDDKII +A +E I + Q+ KD+ L P
Sbjct: 60 -RVILAQNFTDIDDKIIIKANEEGVDAL------EIAERYIVQYWKDSLALGIRPANFHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T+ + ++I IQ++I G AY + ++ F+ S NYG S RK+++ G R+
Sbjct: 113 RTTHFVDEIIEFIQDLIDKGFAYVVDGDVYFNVSEFKNYGELSHRKLEDMIAGARIEPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF LWK + EP W SPWG GRPGWHIECS MS+ LG+ FDIH GG DLIFP
Sbjct: 173 KKKSPEDFALWKAAKEGEPFWNSPWGPGRPGWHIECSVMSTCILGETFDIHAGGADLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS + A W+HNG + L G KMSKS GNFITI + + + +
Sbjct: 233 HHENEKAQSEARHG-KTFARYWMHNGMMRLAGSKMSKSLGNFITIKDAV-------KKYG 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-----------------WPQTSTSKGI 346
IRL + HYR PID++ + L E + + + + +
Sbjct: 285 KDAIRLFIFSKHYRSPIDYSEEMLAENLRAVKRVNAILRDFEKSEGDKPLFSKKTPFVKE 344
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPIFN-ASAHILGIEVCKE 399
+ AL +D NT A+ + L + + ++ + +LGI E
Sbjct: 345 QIERFIEALDDDFNTPKAVALMFDLINKMGETKNRNRKLEIYHLIRNEFGPVLGILEKDE 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++ NI ++ L++ R K K + AD IR +L G L D
Sbjct: 405 EVSANIDGLVKLLIEIRAEFKKDKNYEKADQIRDRLNELGIKLMDTPEGTK 455
>gi|325681889|ref|ZP_08161407.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
gi|324978533|gb|EGC15482.1| cysteine--tRNA ligase [Lactobacillus reuteri MM4-1A]
Length = 478
Score = 377 bits (967), Expect = e-102, Method: Composition-based stats.
Identities = 166/493 (33%), Positives = 252/493 (51%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 9 MLTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 67
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F++DT + T P
Sbjct: 68 -KVNYVSNFTDVDDKMIKAAAEQGITVP------QLAEKYINAFMEDTAAINIEPATLHP 120
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I ++I +Q +I G+AY + ++ + +YG S + +D+ ++G
Sbjct: 121 RATENITEIIKFVQGLIEKGYAYPKDGDVYYRARKFNHYGQLSGQSLDDLEVGASEHVSA 180
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIH GG D
Sbjct: 181 DEVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQD 240
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT++E++
Sbjct: 241 LEFPHHENEIAQSEAETG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII----- 294
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M T YR PI ++ LT+A+ L+ +
Sbjct: 295 --KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQTAFDNLTYREQDADEGDVQ 352
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++A+ +D+N + I +++L + + +
Sbjct: 353 EVTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAQQDNVSLGAIQAIKKELVE 412
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + N+ I++L++ER I K K F+ +D IR L+ +G ILED
Sbjct: 413 LMSIFGVKL-EASDNQINDEKIKQLIEERNIARKNKDFARSDEIRDNLKKQGIILEDT-- 469
Query: 448 PDNGQRMTRWKQK 460
+ TR+K++
Sbjct: 470 ----PQGTRYKKE 478
>gi|322517683|ref|ZP_08070546.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322123671|gb|EFX95263.1| cysteine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 240/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MY+CGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLTENVVNMYICGPTVYNYIHIGNARSAVAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S ++ K F++DT +L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAANEAGIST------KELSDKFITAFMEDTAQLGIKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R N++ ++I + +I G AY A ++ F + NY + + +++ ++G
Sbjct: 113 RVINYMDEIIAFVSTLIDKGFAYVAEGDVYFQVAKSKNYAKLANKTLEDLEIGASGRTDA 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDRKENPLDFALWKAAKEGEISWESPWGPGRPGWHIECSVMATEILGNTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R + YR+PI+FT + + +AE+ L T A
Sbjct: 285 TVDGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTHSLPLTDQVNQDELQTYLDA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D NT + + L +A+ + + F + GI +E +
Sbjct: 345 FQVAMDDDFNTANGVTVLFDMAKWINSGNYDETVKDAFEKMLQVFGIVFEEE----VLDE 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER K F++AD IR +L ++G L D + R
Sbjct: 401 DIEKLIEERQAARANKDFATADRIRDELAAQGIKLLDTREGVRWTR 446
>gi|323963293|gb|EGB58857.1| cysteinyl-tRNA synthetase [Escherichia coli H489]
Length = 461
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENS------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|288940189|ref|YP_003442429.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288895561|gb|ADC61397.1| cysteinyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 461
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 178/481 (37%), Positives = 257/481 (53%), Gaps = 47/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+N+L R+ FQ I+P +RMYVCG TVYD+ H+G+AR ++VFDV+YR LR +
Sbjct: 1 MLQIHNSLTRQKAPFQPIEPGKVRMYVCGMTVYDYCHLGHARVLVVFDVVYRYLRALGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY+RNITDIDDKII RA + + +T + Q +D+ L L PT +P
Sbjct: 61 --VTYIRNITDIDDKIIRRANENG------EPFQALTERFIQAMREDSEALGVLPPTDEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +++ ++Q +I G AY N ++ + S P+YG S + + + G+RV
Sbjct: 113 RATAHIGEILAMVQTLIDKGLAYVADNGDVYYAVSRFPDYGKLSGKDPADLRAGSRVEIG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS+ LG FDIHGGG DL F
Sbjct: 173 ESKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSTCCLGNHFDIHGGGADLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A E N+W+HNGF+ + KMSKS GNF T+ E+L R +
Sbjct: 233 PHHENEIAQSEGATG-EPFVNVWMHNGFVRVNEEKMSKSLGNFFTVREIL-------RLY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
+R +L +HYR P+++ L +A L++ +A
Sbjct: 285 RPEEVRYFILTSHYRSPLNYDDSALQKARAALTRLYTALRGLPEAAPAEGEAFRARFQAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL--------LPIFNASAHILGIEVCKEH------ 400
+ +D NT A+ L +LARE + + LG+
Sbjct: 345 MDDDFNTPEALAVLFELAREINRLRSDGSDQAAAHGALLRELGAALGLLQDDPERYLRGG 404
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ IE ++ +R + ++ AD +R+ L + G +LED G + T W+
Sbjct: 405 ADADGPSDAEIEAMIAQRRAARANRDWAEADRLREALTAAGIVLED------GPQGTTWR 458
Query: 459 Q 459
+
Sbjct: 459 R 459
>gi|182678882|ref|YP_001833028.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
9039]
gi|229558617|sp|B2IEE1|SYC_BEII9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|182634765|gb|ACB95539.1| cysteinyl-tRNA synthetase [Beijerinckia indica subsp. indica ATCC
9039]
Length = 458
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 207/480 (43%), Positives = 294/480 (61%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL R+ F+ IDP+N+R+Y CGPTVYDF HIGN R +IVFD+L+R+LR YG
Sbjct: 1 MALQLYNTLTRQKDIFEPIDPANVRLYACGPTVYDFLHIGNGRMLIVFDLLFRVLRDLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKI RA + I ++T + T F +D L CL PT +
Sbjct: 61 ADHVRYVRNITDVDDKINARAAERGID------IRVLTDEMTAIFHEDAKALNCLPPTVE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +MI +I+ ++ +GHAY A ++FD S+P+YG S+R +D+ G RV
Sbjct: 115 PRATEHMAEMIAIIEKLVANGHAYIAEGHVLFDVPSMPDYGKLSKRPLDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK + P EPGWESPWGRGRPGWH+ECSAMS +LG+VFDIHGGG+DL+F
Sbjct: 175 PYKRSPTDFVLWKPAKPEEPGWESPWGRGRPGWHLECSAMSWKHLGEVFDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+C A + AN+W+HNG L +EG+KMSKS GNF+TI ++L + W
Sbjct: 235 PHHENEVAQTCSAFGHDVMANVWMHNGHLQVEGQKMSKSLGNFLTIRDVL-------KDW 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--------SA 354
P +R ML THYR+PID+T+ L E++ L +W + + I+P + A
Sbjct: 288 PGETVRFTMLKTHYRQPIDWTLSSLRESQRELDRWYPVARAFDQINPDNIPGIPSSFRDA 347
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEVCKEHLNK 403
L +DLNT AI L +L +++ + D + F+ S +E K
Sbjct: 348 LQDDLNTPEAITILRRLYKDALETTDYAGVHLLLCGKLLGLFDQS-----LEKWKNWKPA 402
Query: 404 NISIA---IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ ++ E L++ER K + +D++R L S G +L+D K+ T W+ K
Sbjct: 403 SFTVENVTFEDLIKEREEARAAKNWPKSDHLRDVLASYGIVLKDNKDGT-----TSWEAK 457
>gi|302385700|ref|YP_003821522.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
gi|302196328|gb|ADL03899.1| cysteinyl-tRNA synthetase [Clostridium saccharolyticum WM1]
Length = 467
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 182/485 (37%), Positives = 252/485 (51%), Gaps = 53/485 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ EF +++P I+MYVCGPTVY+ HIGNARP+IVFD + R Y E
Sbjct: 1 MKIYNTLSRQKEEFVSLEPGKIKMYVCGPTVYNLIHIGNARPIIVFDTVRRYFEYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TDIDDKII++A +E I+ + ++ KD L T P
Sbjct: 60 -VNFVSNFTDIDDKIIKKAIEEGVDANT------ISKRYIEECKKDMESLNIKPATKNPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VP 180
AT I M+ +I+ +I GHAYE A+ + F T + YG S + +++ + G R V
Sbjct: 113 ATEEICGMLDMIEKLIASGHAYEAADGTVYFRTKTFGEYGKLSHKNLEDLQSGFREIKVT 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P+DF+LWK EP WESPW +GRPGWHIECS MS YLG DIH GG DL
Sbjct: 173 GEDGKEDPSDFVLWKPKKEGEPYWESPWCQGRPGWHIECSVMSKKYLGDQIDIHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A+ E A W+HNGFLN++ +KMSKS GNF T+ ++ G
Sbjct: 233 IFPHHENEIAQSEAANGKE-FAKYWMHNGFLNIDNKKMSKSLGNFFTVRDI-------GE 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
+ V+R ML HYR PI+F+ + ++ L + ++
Sbjct: 285 KYDLQVLRFFMLSAHYRSPINFSADLMEASKNGLERILTAVDKLKSLEATATTEKLLEGE 344
Query: 350 ----------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASA 389
+A+ +D NT AI + +L + S + L
Sbjct: 345 DNNSVQELVSKYEAAMDDDFNTADAISVIFELVKLSNSTANGDSSREYVTYLRDTIERLC 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI KE + I ++ R K K F+ AD IR +L KG +LED +
Sbjct: 405 EVLGIITEKEEEILDDEIE--AMIAGRQQARKDKNFALADEIRGKLLEKGIVLEDTREGV 462
Query: 450 NGQRM 454
+R+
Sbjct: 463 KWKRV 467
>gi|226950955|ref|YP_002806046.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
gi|254781234|sp|C1FMX3|SYC_CLOBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226842951|gb|ACO85617.1| cysteine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 465
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 247/487 (50%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKSALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|281492464|ref|YP_003354444.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|281376128|gb|ADA65619.1| Cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 448
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 243/466 (52%), Gaps = 36/466 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT R++ +FQ I+P ++MYVCGPTVY++ H+GNAR ++ FD++ + L + E
Sbjct: 1 MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDKII+ A E+ S ++ + F +DT L + P+
Sbjct: 60 -VQYISNFTDVDDKIIKAAANENIST------KELSERYIAAFYEDTDALNVKRASQNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI IQ ++ AY + ++ F S +Y + + + + G
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172
Query: 185 KKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K DF LWK + E W++PWG GRPGWHIECS MS+ LG+ DIHGGG DL
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHH NEIAQS ++ N W+HNGF+N++G KMSKS GNF T++ELL +
Sbjct: 233 FPHHTNEIAQSEAKTG-QRFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELL-------QV 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPA 350
++R + THYR P++FT LTEAE + K
Sbjct: 285 VNPQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + + + K + ++ F+ ILGI+ E ++
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGIKFKFEQ---SLDS 401
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE +++ R + +++ F+ +D IR L+++G +LED K+ R
Sbjct: 402 EIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKDGVRWHR 447
>gi|168798100|ref|ZP_02823107.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
gi|189379362|gb|EDU97778.1| cysteinyl tRNA synthetase [Escherichia coli O157:H7 str. EC508]
Length = 461
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 173/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKHARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKVEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|269837621|ref|YP_003319849.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269786884|gb|ACZ39027.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 468
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 179/489 (36%), Positives = 245/489 (50%), Gaps = 52/489 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ +T + F+ I+P +RMYVCGPTVYD AHIG+A IVFDVL R L Y
Sbjct: 1 MTLRLTDTRTGEQRPFEPIEPGVVRMYVCGPTVYDDAHIGHAMSAIVFDVLRRYLEYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + +N TD+DDKII+RA + + + + +++DT RL T
Sbjct: 61 --RVIHAQNFTDVDDKIIQRAA------TLGIEPRELAERLIEDWLRDTARLNVKPATIY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT I +I +I+ +I GHAY ++ F S P YG S R +DE G R+
Sbjct: 113 PRATQEIDTIIEMIKGLIAEGHAYAVEGGDVFFRVDSFPGYGKLSHRSLDEMMAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK + P EP W+SPWG GRPGWHIECSAM +LG DIHGGG DLI
Sbjct: 173 DPRKENPMDFALWKGAKPGEPAWDSPWGPGRPGWHIECSAMIYRHLGDRIDIHGGGADLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS E A W+HNG L L G KMSKS GN ITI ELLE
Sbjct: 233 FPHHENEIAQSEAFTDQEPLARFWVHNGLLQLGGEKMSKSLGNLITIRELLERG------ 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TS 343
R +L +HYR P+ F+ + + A L++
Sbjct: 287 -DGEAFRFLVLSSHYRSPLTFSDEAMDSARRGLARLQSAVRGFDPATAPATAPDHALARI 345
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILG 393
+A+ +DLNT A+ L +LAR + D + A +LG
Sbjct: 346 ADETRAEFRAAMDDDLNTPVALSHLFELARAINRERDAGAPAAAVAYAQSVLKELAGVLG 405
Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+E + ++ I ++ L++ R L K + + AD IR +L G +ED
Sbjct: 406 LTLETTTQRTDEAIEPFVDLLLEVRAELRKQRLWDLADRIRVRLGELGIRVEDT------ 459
Query: 452 QRMTRWKQK 460
+ + W+++
Sbjct: 460 AQGSTWRRE 468
>gi|329121962|ref|ZP_08250574.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
gi|327467260|gb|EGF12763.1| cysteine--tRNA ligase [Dialister micraerophilus DSM 19965]
Length = 481
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 170/502 (33%), Positives = 248/502 (49%), Gaps = 65/502 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +IK+YNTL+R+ F+ I+ +++YVCG T Y+ HIGNARP + +D++ R L Y
Sbjct: 1 ME-EIKVYNTLKREKQIFKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +++N TD+DDKII +A E ++++ + K L
Sbjct: 60 GY--HVDFIQNFTDVDDKIINKANAEKSD------WKTVSTRYIDAYFKVMDALHIRRAD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
P + H+ +I +++ +I GHAY N++ +D S+ +Y S RK+++ G RV
Sbjct: 112 IYPYVSKHMEDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVM 171
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG FD HGGG DL
Sbjct: 172 VNTAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDL 231
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A +K W+HNGF+ + KMSKS NF + ++LE
Sbjct: 232 IFPHHENEIAQSEGATG-QKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE------- 283
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
+ +R +L THYR P+DF+ +RL EAE +SK ++
Sbjct: 284 KYSGDALRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESV 343
Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNH---------------DLLP 383
A+ +D NT A L ++ + +
Sbjct: 344 SLKKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIEKEAVIEAKE 403
Query: 384 IFNASAHILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
F ILGI + + + + +E ++ R K K++ AD IR +L
Sbjct: 404 TFKTILDILGILESEWNTQESYAGSDYDALMEMILSVRETARKEKQYKLADEIRDKLAEL 463
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G I+ED RWK++
Sbjct: 464 GIIVEDSATGA------RWKKR 479
>gi|306826617|ref|ZP_07459922.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
gi|304431195|gb|EFM34199.1| cysteine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|227529487|ref|ZP_03959536.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
gi|227350572|gb|EEJ40863.1| cysteinyl-tRNA synthetase [Lactobacillus vaginalis ATCC 49540]
Length = 472
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 170/492 (34%), Positives = 254/492 (51%), Gaps = 59/492 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 1 MLTIYNTLTRKQEEFKPQTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K Q F++DT + T P
Sbjct: 60 -KVNYVSNFTDVDDKMIKAAHEQGITVP------QLADKYIQAFMEDTKAINIEPATMHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +IP++I IQ +I G+AYE + ++ + +YG S + ID+ ++G
Sbjct: 113 RATENIPEIIKFIQGLIDKGYAYEKDGDVYYRARKFKDYGQLSGQSIDDLEVGASEHVSD 172
Query: 184 HK----KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ ++P DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIHGGG D
Sbjct: 173 DEINKKEDPMDFALWKAAKPGEINWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT+++++
Sbjct: 233 LEFPHHENEIAQSEAKTG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ V+R M T YR PI ++ L +A+ L +
Sbjct: 287 --KQVDPQVLRFFMATTQYRRPIQYSEDNLIDAKNNLEHIQTAFDNLTYRQKDAQDGADP 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNA 387
+ A+ ND+N + I +++L + + ++ + +
Sbjct: 345 VVTQKLADFKQSFTEAMDNDINVQNGITVVYELVKFANVYAQQKAVKAAALTEMKDLISE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ N+ I+ L+ ER K K F+ +D IR +L+++G ILED
Sbjct: 405 LVSIFGVKLAS-SDNELNDEHIQALIDERNEARKNKDFARSDQIRDELKAQGIILEDT-- 461
Query: 448 PDNGQRMTRWKQ 459
+ TR+K+
Sbjct: 462 ----PQGTRFKR 469
>gi|170754736|ref|YP_001783143.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|229558626|sp|B1IGH6|SYC_CLOBK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169119948|gb|ACA43784.1| cysteinyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
Length = 465
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 248/487 (50%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L + +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|119510000|ref|ZP_01629141.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
gi|119465324|gb|EAW46220.1| cysteinyl-tRNA synthetase [Nodularia spumigena CCY9414]
Length = 477
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 173/498 (34%), Positives = 246/498 (49%), Gaps = 62/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++P ++MY CG TVYD+ H+G+AR IV+DV+ R L++
Sbjct: 1 MTLTLYNTLTRRQEAFATVEPGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI++R+R+EH S + + + + +D RL
Sbjct: 61 E--VRYIQNFTDIDDKILKRSREEHSS------MEAVAERYINAYFEDMGRLGIKPADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + LI + G AY A+ ++ + YG S RK+++ +
Sbjct: 113 PRATHTMNGIQRLIHELENKGFAYPADGDVYYAVRQFNEYGKLSGRKLEDMQAGASERVQ 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE KK+P DF LWK + P EP WES WG GRPGWHIECSAM LG DIH G
Sbjct: 173 VEDPEYQKKKDPFDFALWKAAKPGEPAWESSWGAGRPGWHIECSAMVRDRLGDTIDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + A W+HNG + ++G KMSKS GNF TI +LL+
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLATYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ--------------TST 342
R +RL +LM YR+PIDFT + A +
Sbjct: 289 ---RGVEPMAVRLFVLMAQYRKPIDFTDDAIAAATNGWHTLKEGLLFGYEYGGVGSGEKL 345
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------PIF 385
+ I A+ +D N + L +LA+E + +++
Sbjct: 346 TSEIHIQRFQEAVNDDFNFPGGLAVLFELAKELRRQGNIIVHQGKTETSPEELQKQWQTL 405
Query: 386 NASAHILGIEVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
A + G+ E N I IE L+Q+R K K F+ +D IR QL+++G
Sbjct: 406 VILAEVFGLVAQPEAENAIIEGLSDAEIENLIQQRQAARKSKNFAESDRIRDQLQAEGIT 465
Query: 442 LEDYKNPDNGQRMTRWKQ 459
L D ++ TRW +
Sbjct: 466 LIDSRD------GTRWHR 477
>gi|50915009|ref|YP_060981.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
gi|61216145|sp|Q5X9W5|SYC_STRP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|50904083|gb|AAT87798.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIVFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|296115000|ref|ZP_06833644.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295978462|gb|EFG85196.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 452
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 194/471 (41%), Positives = 266/471 (56%), Gaps = 35/471 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ ++++ RK F +DP N+R+Y CGPTVYD AHIGN R M+ DVL RLLR+ Y
Sbjct: 1 MPRLSLHDSKSRKTVAFTPLDPENVRVYYCGPTVYDLAHIGNLRAMVTADVLVRLLRHLY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRNITD+DDKI RAR+ N+ I+ +T++ F +D ++ L P
Sbjct: 61 --PHVTYVRNITDVDDKINARAREN------NEPITALTARTIHDFHQDLAAVSILPPDI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT+HI QM +I +I +GHAYEA ++F + +YG S R D+ G RV
Sbjct: 113 EPRATHHIEQMQRMISELIDNGHAYEAEGHVLFSVADYSDYGGLSGRSADDLMAGARVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K+ P DF+LWK S PGW+SPWGRGRPGWHIECSAMS HYLG+ FDIHGGG DL+
Sbjct: 173 ADYKRAPGDFVLWKPSDVDTPGWDSPWGRGRPGWHIECSAMSYHYLGESFDIHGGGSDLL 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS C + AN W+HN L ++G KMSKS GNF+T+ ++L R
Sbjct: 233 FPHHENERAQSMCCHPHGRFANHWVHNAMLLVDGEKMSKSLGNFLTVRDVL-------RD 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------PAVLS 353
PA +RL +L YR ++FT L +A L ++ + D +
Sbjct: 286 TPAEALRLLLLRAQYRSVLNFTRDGLDDARQTLDRFYRALAMLNDGDAAGTTPPPDVFVR 345
Query: 354 ALYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGI-----EVCKEHLNKNISI 407
AL DLNT +AI +H +A R + A+ ++G+ + + +
Sbjct: 346 ALCEDLNTPAAIAEMHAMANRALAGDAQAARDLRAAGRLIGLLGSTPDTWFRGDAQLDTA 405
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
I+ L+ ERL K + F+ AD IR +L +G LED G T W+
Sbjct: 406 KIQALIDERLAARKARDFARADAIRDELAQQGIALED------GPGGTTWR 450
>gi|260575276|ref|ZP_05843276.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
gi|259022536|gb|EEW25832.1| cysteinyl-tRNA synthetase [Rhodobacter sp. SW2]
Length = 480
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 204/479 (42%), Positives = 260/479 (54%), Gaps = 43/479 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++YN R +F +D +N+RMYVCGPTVYD AHIGNARP++VFDVL+RLLR+ YGE
Sbjct: 4 IRLYNGKTRAKEDFTPLDAANVRMYVCGPTVYDRAHIGNARPVVVFDVLFRLLRHVYGEG 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI +A I IT + + D L L PTH+PR
Sbjct: 64 HVTYVRNFTDVDDKINAKAAATG------RPIRAITDETIAWYHADMDALGALRPTHEPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I QMI +I +I GHAY A ++FD S P+YG S R ID+ G RV +
Sbjct: 118 ATEYIGQMIAMIAGLIASGHAYAAEGHVLFDVRSYPDYGRLSGRSIDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK S PGW+SPWG GRPGWHIECSAMS LG FDIHGGG+DL FPH
Sbjct: 178 KRDPMDFVLWKPSDAATPGWDSPWGYGRPGWHIECSAMSDALLGASFDIHGGGIDLQFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS CA + A +W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 238 HENEVAQSACAHPGQGFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVPG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
VIRL L THY +P+D+T ++ +AE L W G D
Sbjct: 292 EVIRLVYLGTHYSKPMDWTAEKAAQAEATLRDWYLHLHQHGFSADMVRVLKEAGQWKADD 351
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN----- 404
+ L NDLNT AI LH LA+ + L F +LG L +
Sbjct: 352 EFIGVLSNDLNTSGAIARLHVLAK--NRTAATLAPFAFGLELLGFVNDWSMLAELAHIGV 409
Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + L+ ER + F+ AD IR L G + D + Q
Sbjct: 410 SQSGHHEPWVESVVAGLLFERQEARASRNFAVADRIRDVLTEAGVQVTDVGGVASWQPG 468
>gi|15902563|ref|NP_358113.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
gi|116517189|ref|YP_816017.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
gi|30316153|sp|Q8DQS8|SYC_STRR6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15458093|gb|AAK99323.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae R6]
gi|116077765|gb|ABJ55485.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae D39]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|193211882|ref|YP_001997835.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
gi|193085359|gb|ACF10635.1| cysteinyl-tRNA synthetase [Chlorobaculum parvum NCIB 8327]
Length = 488
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 166/499 (33%), Positives = 242/499 (48%), Gaps = 60/499 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IYN+L RK F+ I P +YVCGPTVY AH+G+A+ + FDV+ R LR+
Sbjct: 1 MPSSLHIYNSLTRKKEPFEPIQPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHV 60
Query: 61 YG--EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
V YV+NITD+ +DKI ++ARQE + T+ F
Sbjct: 61 GEQQGYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIE------PMEVAQFYTRSFY 114
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+D RL P P AT HIP+ I L++ ++ GHAYE+N + FD +S YG S R
Sbjct: 115 EDMDRLGVERPNIAPTATGHIPEQIALVERLVETGHAYESNGNVYFDVNSFAGYGKLSGR 174
Query: 169 KIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
E + G RV E+ K+NP+DF LWK++ P W+SPWG G PGWH+ECSAM+ Y
Sbjct: 175 TDQEALQSGGRVAERSDKRNPSDFALWKKAEPSHIMKWQSPWGEGYPGWHLECSAMAMKY 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG DIHGGG++ FPHH+ EIAQS A + W+HN + ++G KM KS NF+
Sbjct: 235 LGDTIDIHGGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNFV 293
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+ EL T + VIR +L +HYR P+DF+ + ++ K +T
Sbjct: 294 NLKELFGT-------FDPLVIRFFILQSHYRSPLDFSEAAIKASQSGFEKLQETYKRLVE 346
Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------L 382
+ + AL +D NT AI L + + D
Sbjct: 347 SAEDKGQLEVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKGGLDAASKAAALA 406
Query: 383 PIFNASAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ + +LGI + L + + ++ L++ R K F+++D IR
Sbjct: 407 LLATYAGEVLGILKSRNELLAGESGESAQTLDDVMQVLLELRKEARANKDFATSDKIRDL 466
Query: 435 LESKGFILEDYKNPDNGQR 453
L +G ++D K +
Sbjct: 467 LMERGIEVKDTKEGATWTK 485
>gi|19746854|ref|NP_607990.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
gi|24418689|sp|Q8NZD1|SYC_STRP8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|19749094|gb|AAL98489.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes
MGAS8232]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++E+L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHEMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|313635089|gb|EFS01438.1| cysteinyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
Length = 471
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 171/492 (34%), Positives = 253/492 (51%), Gaps = 57/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MAIQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIKAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I LI +I G+AYE+ ++ F T +YG S + + E + G RV
Sbjct: 113 PRVTENMDEIIQLINTLIEKGYAYESAGDVYFRTKKFEDYGKLSGQALSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DLIF
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHE+EIAQS A + AN W+HN FLN++G KMSKS GNFIT++++L +
Sbjct: 233 PHHEDEIAQSEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDN 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
VIR ML HYR+PI L +A+ L + +
Sbjct: 285 DPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHQD 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A + +D NT +AI H+LA+ + + L +
Sbjct: 345 EWLEQLTELKHAFEEDMDDDFNTANAITTFHELAKRANIYLSKEVVSVNVLREFLSMMRL 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A +LG+++ +E L++ERL + F+ AD IR L+ K ILE
Sbjct: 405 FAEVLGLKLEYTQTESLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILE---- 460
Query: 448 PDNGQRMTRWKQ 459
+ TR+++
Sbjct: 461 --XXXQGTRFRR 470
>gi|322390880|ref|ZP_08064388.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
gi|321142393|gb|EFX37863.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 162/463 (34%), Positives = 236/463 (50%), Gaps = 30/463 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MLKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMEDIIRFVADLIEKGYAYESQGDVYFRVEKSNNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDP--------A 350
+ V+R HYR+PI+FT + R E + K G +DP
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFAGEVDPADLQNFVDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
++A+ D+N + I + +LA+ H + +A A +L + + + IE
Sbjct: 345 FIAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALAKML-EVFGVVFVEEVLDADIE 403
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
L+ ER K F+ AD IR +L ++G L D K R
Sbjct: 404 ALIAERQEARAKKDFARADAIRDELAAQGIKLLDTKEGVRWTR 446
>gi|21911208|ref|NP_665476.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
gi|28896585|ref|NP_802935.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
gi|25009287|sp|Q8K5T7|SYC_STRP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21905420|gb|AAM80279.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
gi|28811839|dbj|BAC64768.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
Length = 447
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TDIDDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDIDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|153940395|ref|YP_001392856.1| cysteinyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|187629802|sp|A7GJ96|SYC_CLOBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|152936291|gb|ABS41789.1| cysteine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|295320834|gb|ADG01212.1| cysteine--tRNA ligase [Clostridium botulinum F str. 230613]
Length = 465
Score = 376 bits (966), Expect = e-102, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 248/487 (50%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINIDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L + +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|169830058|ref|YP_001700216.1| cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
gi|226735062|sp|B1HNM3|SYC_LYSSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|168994546|gb|ACA42086.1| Cysteinyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
Length = 466
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 171/489 (34%), Positives = 249/489 (50%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+N+L R+ F ++ ++MYVCGPTVY++ HIGN+RP+IV+D + R +Y
Sbjct: 1 MSIQIFNSLSRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDKII+ A + + + + +T + + +D T L C
Sbjct: 61 D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I IQ +I G+AYE+ ++ + T YG S + +D+ K+G R+
Sbjct: 113 PRVTEHMADIIQFIQVLIEKGYAYESAGDVYYRTRKFNGYGKLSHQSVDDLKIGARIEAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K + DF LWK + P E WESPWG GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWESPWGNGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNG++N++ KMSKS GNFI +N++ +
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDI-------RKQI 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+R ML HYR PI+F + A L + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINFAKDLVEAASAGLERIRTAYNNVKHRLTTTVSLGDHSDEWL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
A+ +D NT + I L +LAR + + + F
Sbjct: 345 NKITEQKAQFEEAMDDDFNTANGISVLFELARIANIYLNETNTCKKVLETFIETFEVLGD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGIE KE + I QER+ K + F+ +D IR L+++G ILED +
Sbjct: 405 VLGIEFAKEEELLDEEIEALL--QERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 459 --QGTRWKR 465
>gi|83719803|ref|YP_442471.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|167581386|ref|ZP_02374260.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
gi|167621097|ref|ZP_02389728.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis Bt4]
gi|257138679|ref|ZP_05586941.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|109894888|sp|Q2SX78|SYC_BURTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|83653628|gb|ABC37691.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 465
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 179/486 (36%), Positives = 249/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R +F P +RMYVCG TVYD+ HIG+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAA 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRALENG------ETIQSLTRRFIDAMNADFDALGVERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ + ++ + NYG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K K +P DF+LWKR+ P EP WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AAKDAKDDPLDFVLWKRAKPEEPAGASWESKYGAGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 288 ----KYDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVTPDAAPLDWSEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + + L A L
Sbjct: 344 HAQRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLKRLAGLLGLLGREPREFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QAAGAARTGALEPDEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|322411055|gb|EFY01963.1| cysteinyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 447
Score = 376 bits (965), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF + + + MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLREFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYAGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 60 -KVNYVSNFTDVDDKIIKAAAQAGVS------PKELSDRFIAAFMEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I +Q +I G AYE ++ F +Y + + I E ++G
Sbjct: 113 RVMDYMAEIISFVQVLISKGFAYEVAGDVYFRVEKSEHYAQLANKTISELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETSLKENPLDFALWKSAKTGEVSWDSPWGPGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLSA---- 354
V+R + YR+PI+FT + R E + K D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTDKAIRDAEVNLKYLKNTFQQPLTEKADEQELKRFVTA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTGMVKESFEKILAVFGIIFEEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F +AD +R QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARTNRDFVTADALRDQLAAQGIKLLDTKDGVRWTR 446
>gi|308273875|emb|CBX30475.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 478
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 187/499 (37%), Positives = 247/499 (49%), Gaps = 63/499 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT+ERK F+ + P + MYVCGPTVYD HIG+AR +IVFDV+ + L
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA Q + + ++F +D L T +
Sbjct: 61 E--VTYVRNFTDVDDKIINRAVQLGIES------HEVAERYIKEFYEDMDALNIKRATIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++I LI+ ++ AY + +I + +YG S RK+++ + G RV
Sbjct: 113 PKATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF LWK P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIF
Sbjct: 173 ERKNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNGF+N+ KMSKS GNF+ I ++L +S+
Sbjct: 233 PHHENEIAQSEGAF-EKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
+RL +L HYR PIDFT + + E+E L K I
Sbjct: 285 HPDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVEEIADITGKDFINYPEGY 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASAHILG 393
++ +D NT I L R + D + ++G
Sbjct: 345 WEKFCESMDDDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTIINSIYADIRKMGDVIG 404
Query: 394 IEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
I + I+ LV++R K K + AD IR +L I
Sbjct: 405 ILSEPAEIYFNKKKTKFIETKDVDPSLIDALVKQRFEARKAKDWKKADRIRDKLSGIDVI 464
Query: 442 LEDYKNPDNGQRMTRWKQK 460
+ED WK K
Sbjct: 465 IEDKPEGS------IWKFK 477
>gi|268318912|ref|YP_003292568.1| hypothetical protein FI9785_418 [Lactobacillus johnsonii FI9785]
gi|262397287|emb|CAX66301.1| cysS [Lactobacillus johnsonii FI9785]
Length = 470
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 250/493 (50%), Gaps = 62/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL RK EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y +
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR+EH ++ + + + F++DT L T PR
Sbjct: 60 -VNYVSNFTDVDDKMINEARKEHTTVEK------LAERYIKAFMEDTEALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETILKRYQNTLRNLDARLNDENETLED 344
Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
+ A+ +D N +A+ ++ LA + +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
A I G+ +E IEKL+ +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 AWLEIFGVSFKEEQAGN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461
Query: 447 NPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 462 -----PQGTRWHR 469
>gi|254429556|ref|ZP_05043263.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
gi|196195725|gb|EDX90684.1| cysteinyl-tRNA synthetase [Alcanivorax sp. DG881]
Length = 460
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 208/482 (43%), Positives = 276/482 (57%), Gaps = 47/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL K +F +DP I +YVCGPTVY+F HIGNARP++VFDVLYRLL+ Y
Sbjct: 1 MTLRLQNTLTGKKDDFIPLDPDRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKII+ A + + IS++T + T F +D L P
Sbjct: 60 -PNVVYARNITDIDDKIIKAAAENG------EDISVLTERFTAAFAEDMASLNAKTPNII 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HIP+MI +I ++ GHAYEA+ +++F S+P+YG S RK+++ G RV
Sbjct: 113 PKATDHIPEMIQMIATLVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DFILWK S+ +PGWESPWGRGRPGWHIECSAM +LG V DIHGGG DLIF
Sbjct: 173 DYKRHPGDFILWKPSSDEQPGWESPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ CCA + W+HNG++N++G KMSKS GNF + +LL +
Sbjct: 233 PHHENEIAQGCCAHGTD-YVRYWLHNGYINIDGEKMSKSLGNFRLVRDLLT-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------DPAV 351
++R A+L +HYR P++F+ L AE L +G + V
Sbjct: 285 HGEILRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEADYQLPDNHPV 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLNK 403
L AL +DLNT A+ ALH +A E K L +L ++ NK
Sbjct: 345 LDALKDDLNTSEAVSALHAIAGELNKAELADKPTLKAELLAAADLLGLLTVDPTAWFQNK 404
Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N+S I+ LV ER K K F+ AD IR+QL G LED + TRW
Sbjct: 405 NVSEDGLSNDDIDALVAERTQAKKDKNFARADEIRQQLTDAGIQLEDTR------EGTRW 458
Query: 458 KQ 459
+
Sbjct: 459 SR 460
>gi|296134921|ref|YP_003642163.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
gi|295795043|gb|ADG29833.1| cysteinyl-tRNA synthetase [Thiomonas intermedia K12]
Length = 460
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 189/476 (39%), Positives = 267/476 (56%), Gaps = 43/476 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++NTL R F I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+
Sbjct: 4 LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQG--L 61
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKII RA++ + I +T + +D L PTH+PR
Sbjct: 62 RVTYVRNITDIDDKIIRRAQENG------ETIRALTDRFIAAMHEDADALGVERPTHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+++PQM+ LI + G AY + ++ F + P YG S + +DE + G RV
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP W S G GRPGWHIECSAMS LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A + AN+W+HNGF+ ++G KMSKS GNF TI ++L +
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDIL-------Q 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PA 350
A +RL ++ HYR P++++ + L +A L++ + A
Sbjct: 288 HVDAETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRLYTALDPFADLPARLDWSHPRAQA 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI------EVCKEHLN 402
+A+ +DLNT A+ L +LA E K + DL + +LG+ E +
Sbjct: 348 FAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAA 407
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +E+LVQER+ + + F+ AD IR +L +KG +LED +T W+
Sbjct: 408 AVDAAWVEQLVQERIAAKQARNFAEADRIRAELSAKGIVLEDKPGG-----ITVWR 458
>gi|116512729|ref|YP_811636.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
gi|123125354|sp|Q02WZ9|SYC_LACLS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116108383|gb|ABJ73523.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
Length = 448
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 157/463 (33%), Positives = 239/463 (51%), Gaps = 30/463 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT R++ +FQ I+P ++MYVCGPTVY++ H+GNAR ++ FD++ + L + E
Sbjct: 1 MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDKII+ A E+ S ++ + F +DT L + P+
Sbjct: 60 -VEYISNFTDVDDKIIKAAVSENIST------KELSERYIAAFYEDTDLLNVKRASQNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI IQ ++ +AY + ++ F + NY + + + + G
Sbjct: 113 ATEFIEAMIDFIQELLDKDYAYISEGDVYFRVAKSKNYAKLANKNLADLLAGASGRTDEE 172
Query: 185 KKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
DF LWK E W++PWG GRPGWHIECS MS+ LG+ DIHGGG DL
Sbjct: 173 TNLKESPADFALWKSVKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHH NEIAQS +K N W+HNGF+N++G KMSKS GNF T++ELL +
Sbjct: 233 FPHHTNEIAQSEAKTG-QKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELL-------QV 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPA 350
++R + THYR P++FT LTEAE + K
Sbjct: 285 VDPQILRFFLATTHYRRPLNFTDDALTEAENNIKKIENAYRHLDDQAESNLSALTTFRND 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
++A+ D N + + + K + + +L I K + +++ IE
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGAEVKAFFDQVLEILGIKFEIEQSLDSEIE 404
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+++ R + +++ F+ +D IR L+++G +LED K+ R
Sbjct: 405 AMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKDGVRWHR 447
>gi|329113816|ref|ZP_08242587.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
gi|326696826|gb|EGE48496.1| Cysteinyl-tRNA synthetase [Acetobacter pomorum DM001]
Length = 478
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 200/465 (43%), Positives = 272/465 (58%), Gaps = 31/465 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++ R F IDP+++++Y CGPTVYD AHIGN R M+ DVL RLLR+ Y
Sbjct: 34 LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVY--P 91
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRNITD+DDKI RAR + I +T + T++F +D + L P +PR
Sbjct: 92 RVTFVRNITDVDDKITARARANG------EDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 145
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I +M +I +I +GHAYEA ++F S P+YG+ S R ++ + G RV +
Sbjct: 146 ATHNIGEMQAMIARLIKNGHAYEAEGHVLFSVGSFPSYGALSGRNPEDLEAGARVEVAPY 205
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK P DF+LWK S +PGW+SPWGRGRPGWHIECSAMS YLG FDIHGGG DL+FPH
Sbjct: 206 KKAPGDFVLWKPSDADQPGWDSPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 265
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQS C K AN W+HN L +EG KMSKS GNF+TI ++L PA
Sbjct: 266 HENERAQSMCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLAQA-------PA 318
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN 360
+RL +L HYR +++T L EA L ++ + K + VL AL +DLN
Sbjct: 319 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPKTDVPEGVLQALADDLN 378
Query: 361 TVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQ 414
T AI LH LA ++ + A A +LG+ + AIE L+
Sbjct: 379 TPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDASDEDAAIEALIN 438
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
ERL K + F+ AD +R QL+++G +LED K+ T W++
Sbjct: 439 ERLAARKARDFAKADALRDQLQAQGIVLEDTKD------GTSWRR 477
>gi|110834996|ref|YP_693855.1| cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
gi|123050340|sp|Q0VML5|SYC_ALCBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110648107|emb|CAL17583.1| Cysteinyl-tRNA synthetase [Alcanivorax borkumensis SK2]
Length = 460
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 212/482 (43%), Positives = 278/482 (57%), Gaps = 47/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL K +F +DP+ I +YVCGPTVY+F HIGNARP++VFDVLYRLL+ Y
Sbjct: 1 MTLRLQNTLTGKKDDFIPLDPNRITLYVCGPTVYNFVHIGNARPVVVFDVLYRLLQRLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKII+ A +AIS +T + TQ F D L P+
Sbjct: 60 -PNVVYARNITDIDDKIIKAAADNG------EAISTLTERFTQAFADDMASLNAKTPSII 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HIP+MI +I ++ GHAYEA+ +++F S+P+YG S RK+++ G RV
Sbjct: 113 PKATDHIPEMIQMIAILVEKGHAYEADGQVLFAVESMPDYGKLSGRKLEDMLAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DFILWK ST +PGW+SPWGRGRPGWHIECSAM +LG V DIHGGG DLIF
Sbjct: 173 DYKRHPGDFILWKPSTDEQPGWDSPWGRGRPGWHIECSAMIHKHLGDVIDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ CCA + W+HNG++N++G KMSKS GNF + +LL +
Sbjct: 233 PHHENEIAQGCCAHGTD-YVRYWLHNGYINIDGEKMSKSLGNFRLVRDLLT-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------DPAV 351
+R A+L +HYR P++F+ L AE L +G + V
Sbjct: 285 HGETLRFALLSSHYRSPLNFSADVLDNAEKGLDTLYYALLGRGETVAPEAGYQLPDNHPV 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEHLNK 403
L AL +DLNT A+ ALH +A E K L +L +E NK
Sbjct: 345 LDALKDDLNTSEAVSALHAIAGELNKAELDDKPKLKAELLAAADLLGLLTVEPTAWFQNK 404
Query: 404 NISI------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
N+S AI+ LV+ER K K F+ AD IR+QL G LED + TRW
Sbjct: 405 NVSEDGLSNDAIDALVEERTQAKKDKNFARADEIRQQLTKAGIQLEDTR------EGTRW 458
Query: 458 KQ 459
+
Sbjct: 459 SR 460
>gi|254294732|ref|YP_003060755.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
gi|254043263|gb|ACT60058.1| cysteinyl-tRNA synthetase [Hirschia baltica ATCC 49814]
Length = 461
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 188/475 (39%), Positives = 264/475 (55%), Gaps = 37/475 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+ N+L RK F D + MYVCGPTVY +AHIGN RP +VFD+LYRLLR YG
Sbjct: 1 MDIKLTNSLTRKKEVFIPQDEERVTMYVCGPTVYSYAHIGNFRPPVVFDILYRLLRSKYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
++ V Y N+TD+DDKII+ + + IS IT K T+ +++D+ L L P +
Sbjct: 61 DEAVLYASNLTDVDDKIIKASNDSG------EPISAITEKFTKAYLEDSAALNILEPDFR 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P A HIPQMI +++ + +AY + + F S+ +YG S R +D+ G RV +
Sbjct: 115 PTAVAHIPQMIEMMKKLERKKYAYRTESGLWFHVKSMEDYGKLSGRNLDDMLAGARVDVE 174
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++PADF LWK + P EP W+SPWGRGRPGWHIECSAM LGK DIHGGG+D
Sbjct: 175 SEKRDPADFALWKVAKPGEPEDAIWDSPWGRGRPGWHIECSAMIEAVLGKTIDIHGGGID 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS CA E A+ W+HNGFL++E KMSKS GN +E+L
Sbjct: 235 LQFPHHENEIAQSECAHG-EIMAHYWLHNGFLDIESEKMSKSIGNVKIPHEML------- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------DPAVLS 353
+ V+R+A+L YR+P+D+T L + + L + D AV+
Sbjct: 287 KETHGEVLRMALLSAQYRQPLDWTQALLDQCKATLDRAYGALRRVWDFADIEYEDIAVIH 346
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI-----EVCKE 399
AL +DLNT A+ L +++ E+ + D + +LG+ E ++
Sbjct: 347 ALCDDLNTPQALAELSRISGEANRAADAGDQEAMAQARADLIFAGDMLGLLQLTPEEWEK 406
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + + I+ LVQ RL K ++ AD IR +L ++G + D +R
Sbjct: 407 GDDGDDAARIDLLVQARLDARANKDWAEADRIRDELAAEGIEIMDNAGGSTWRRG 461
>gi|325299474|ref|YP_004259391.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
gi|324319027|gb|ADY36918.1| cysteinyl-tRNA synthetase [Bacteroides salanitronis DSM 18170]
Length = 492
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 164/497 (32%), Positives = 242/497 (48%), Gaps = 55/497 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MENKLIIYNTLSRRKEPFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLLRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIKLVEEILKNGYAYESQGSVYFDVAKYNKDHHYGVLSG 172
Query: 168 RKIDEQK-MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVINTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ ++ W+HN + + G+KM KS GNF
Sbjct: 233 YLGETFDIHGGGMDLIFPHHECEIAQAVASEG-HPMVRYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ E K +++ IR +L HYR +DF+ + L AE L + + +
Sbjct: 292 ITLEEFFTGSNKLLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGIKNL 351
Query: 345 GIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
I P A+ +DLNT I L R D +A+
Sbjct: 352 ERITPSASTSGIEPAGLREKCYEAMNDDLNTPIVISHLFDGIRMINTVLDKKATISAADL 411
Query: 390 ------------HILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
ILG++ E+ + S ++ L++ER+ K ++++D IR
Sbjct: 412 EELKSVFHLFAFDILGLKAEGENNAAREEAFSKVVDMLLEERMKAKANKDWATSDKIRDS 471
Query: 435 LESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 LAALGFEVKDTKDGFTW 488
>gi|291166310|gb|EFE28356.1| cysteine--tRNA ligase [Filifactor alocis ATCC 35896]
Length = 466
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 250/487 (51%), Gaps = 55/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ YNTL R+ EF I+ + ++MY CGPTVY++ HIGNARP I+FD L L Y E
Sbjct: 1 MRFYNTLTRRKDEFVPIEKNKVKMYSCGPTVYNYFHIGNARPFIIFDTLRNYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TD+DDKII RA +E S + K +++ D L + PR
Sbjct: 60 -VTFVQNFTDVDDKIINRANEEGIS------PLEVADKYIKEYFVDADGLGIRRASVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T I +I I+ +I GHAYE + ++ +DT S YG SR+ ++E G R+
Sbjct: 113 VTECIEDIIEFIEELIQKGHAYEIDGDVYYDTKSFDGYGKLSRQNMEELNAGARIDVDDR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P+DF LWK+ E GW SPWG GRPGWHIECS MS YLG DIH GG DLIFPH
Sbjct: 173 KKSPSDFALWKKKKEGEIGWISPWGEGRPGWHIECSVMSRKYLGDTIDIHSGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS E A+ W+HNG++N+ +KMSKS NF T+ E+ E
Sbjct: 233 HENEIAQSEGRSGKE-FAHYWLHNGYININNQKMSKSLNNFFTVREISEV-------IDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
++R +L YR P++F+ L A+ + + T +
Sbjct: 285 EIVRFFLLSAQYRNPVNFSQDLLDAAKSGMERLYNTKHKVEFLLEQAQGMIKEDEKEFVS 344
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHIL 392
+ A+ +DLNT I A+ +L++ + + IF ++L
Sbjct: 345 KLPSYRELFIEAMDDDLNTADGISAIFELSKFINTTVSEKSSKEYLQECMNIFCELTNVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
I + K+ + I +L+++R + K K F+ AD IR QL G + D +
Sbjct: 405 NI-IQKKKSDGFDEDKINELIEQRSLAKKEKNFAEADRIRGQLHDMGVEVLDTR------ 457
Query: 453 RMTRWKQ 459
+ T WK+
Sbjct: 458 QGTTWKK 464
>gi|238855655|ref|ZP_04645955.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
gi|260664903|ref|ZP_05865754.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
gi|282933604|ref|ZP_06338973.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
gi|238831721|gb|EEQ24058.1| cysteine--tRNA ligase [Lactobacillus jensenii 269-3]
gi|260561386|gb|EEX27359.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii SJ-7A-US]
gi|281302259|gb|EFA94492.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
Length = 473
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 61/494 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L Y +
Sbjct: 1 MKIYNTLTRQKEEFKPLVPGQVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + + F++DTT L T PR
Sbjct: 60 -VKYVSNFTDVDDKMINEARAEGITVP------ELAKRYINAFMEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
AT I +I I+ +I G AYE + ++ + YG S + I + G
Sbjct: 113 ATEEIKDIIAFIKTLIEKGFAYEVDGDVYYRAKKFTGYGKLSDQDIASLEEGASQHVNEA 172
Query: 184 ---HKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK+ E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + +KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKDEQKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
+ V+R M YR+PI+++ + L +A I+L K T
Sbjct: 287 --KRVDPQVLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLKETNSQENQ 344
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ + + A+ +D N +A+ ++ L KN L
Sbjct: 345 DLTIAIEDSENRFKEAMDDDFNVQNALSVVYDLLPVINKNISEDTSDLSALRKFLQHLEK 404
Query: 388 SAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+++ K K + IE+LV++R K K F+++D IR QL IL+D
Sbjct: 405 WLAIFGVDIDKLTTEKVSDDDAEIEELVKKRDEARKNKDFATSDTIRDQLAEMNIILQDT 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T+W++
Sbjct: 465 ------PKGTKWRR 472
>gi|329666764|gb|AEB92712.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii DPC 6026]
Length = 470
Score = 375 bits (964), Expect = e-102, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 249/493 (50%), Gaps = 62/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL RK EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y +
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR+EH ++ + + + F++DT L T PR
Sbjct: 60 -VNYVSNFTDVDDKMINEARKEHTTVEK------LAERYIKAFMEDTEALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I ++I +Q++I G AYE + + + PNYG S + I E + G
Sbjct: 113 ATHEIKEIIDFVQDLIDKGFAYEVDGNVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLDDENERLED 344
Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
+ A+ +D N +A+ ++ LA + +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
A I G+ +E IEKL+ +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 AWLEIFGVSFKEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461
Query: 447 NPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 462 -----PQGTRWHR 469
>gi|261599939|dbj|BAI45220.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 179/510 (35%), Positives = 264/510 (51%), Gaps = 74/510 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KK + +YNT+ RK F+ + MYVCG T YDF+HIG+AR + FD+LYR L+Y
Sbjct: 80 IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V YVRN TD+DDKII RA + + + ++ + +F +D + L CL P+
Sbjct: 140 GYD--VCYVRNFTDVDDKIIARANE------VGENPISLSRRFCDEFHQDMSYLHCLPPS 191
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR ++H+PQ+I +I+ I+ +G AY + ++ F P+YG S RK+++ + G RV
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NPADF LWK + EP WESPWG GRPGWHIECSAMSS YLG FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEI QSC A E W+HNGF+ + KMSKS GNF TI +++E
Sbjct: 312 MFPHHENEIVQSCAAC-CESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
+ +RL ++ THYR PI+++ L A + QT
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423
Query: 343 ------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLP 383
+ + + ++ +DL+T + AL + + L
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483
Query: 384 IFNASAHI---LGIEV---------CKEHLNKNI---SIAIEKLVQERLILLKMKKFSSA 428
+ H+ LG+ +E K + +++ ++ER + K K++ +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKNKEYEKS 543
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D IRK+L + G L D T W+
Sbjct: 544 DAIRKELAAVGIALMDS------PEGTTWR 567
>gi|194396665|ref|YP_002037254.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
gi|194356332|gb|ACF54780.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae G54]
Length = 447
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 231/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y
Sbjct: 1 MIKIYDTMSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RAR+E + + K F +D T L T P
Sbjct: 60 -KVAYISNFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++++I G AYE+ ++ F NY + + +++ +G
Sbjct: 113 RVVEFMADIIRFVEDLIERGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
+ V+R HYR+PI+FT + + +AE L T
Sbjct: 285 TLDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + I + ++A+ + + I GI +E +
Sbjct: 345 FVAAMDEDFNAANGITVVFEMAKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+Q+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 EIEDLIQKRQEARANRDFETADQIRDQLVTQGIKLLDTKDGVRWTR 446
>gi|153009938|ref|YP_001371153.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
gi|187629834|sp|A6X270|SYC_OCHA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151561826|gb|ABS15324.1| cysteinyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 505
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 223/502 (44%), Positives = 293/502 (58%), Gaps = 52/502 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YNTL R EF +D N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PQLRLYNTLTRMKEEFSPLDADNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY RNITD+DDKI RA +++P + N+AI +T QF D T L L P+ Q
Sbjct: 65 AEHVTYARNITDVDDKINARAARDYPDLAFNEAIRRVTESTNAQFQADVTALGNLQPSVQ 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGT 177
PRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +RR +DE G
Sbjct: 125 PRATEHMDEMRAMIDRLVKLGVAYVAEDHVLFSPSAMNERKGPRYGALARRSLDEMLAGA 184
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM------------ 222
RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 185 RVDVASYKRDEMDFVLWKPSKEGEPGWSSPAGIAVLGRPGWHIECSAMSMAKLLEPFGGG 244
Query: 223 --SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
L FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNGFL +EG+KMSK
Sbjct: 245 LKCDDPLKNQFDIHGGGIDLVFPHHENEIAQSCCAFGTERMANIWMHNGFLQVEGQKMSK 304
Query: 281 SNGNFITINELLETKKFGGRSWP---------APVIRLAMLMTHYREPIDFTVQRLTEAE 331
S GNFITI ++L W RL+ML THYREPI++T QRL E+
Sbjct: 305 SLGNFITIRDVLNEGLPQLGVWDDVDARDRWIGLAARLSMLQTHYREPINWTAQRLAESA 364
Query: 332 ILLSKWPQTSTSKGIIDPAVL-------SALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W + P L AL +DLN+ +AI AL R++ K D+ +
Sbjct: 365 DELHRWYGLLRDRKFTVPETLTAVGEVVEALSDDLNSWTAITAL----RKAFKARDITGL 420
Query: 385 FNASAHILGIEVCKEHLNKNIS---------IAIEKLVQERLILLKMKKFSSADYIRKQL 435
A +LG+ + ++I AIE + ERL + K ++ AD IR +L
Sbjct: 421 GEGMA-LLGLLDPHFVMAEDIPVFAKAEVDHQAIEARIAERLRFINEKNWAEADRIRDEL 479
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+G L+D K+P G+R T W
Sbjct: 480 LQEGVQLKDGKDPATGERTTSW 501
>gi|326523811|dbj|BAJ93076.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 573
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 184/501 (36%), Positives = 263/501 (52%), Gaps = 68/501 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + +YNT R+ F+ P + MYVCG T YD +HIG+AR + FDVL+R LRY
Sbjct: 72 RDMHLYNTRSRRREPFRPRAPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLFRYLRYLD 131
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YVRN TDIDDKII RA Q + + ++ + + F+ D L CL P+
Sbjct: 132 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMAHLQCLPPSV 183
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PR ++HI Q++ +I+ II +G AY + ++ F + P Y S RK+D+ + G RV
Sbjct: 184 EPRVSDHIDQIVTMIKQIIDNGCAYVVSGDVYFSVDNFPEYRKLSGRKLDDNRAGERVAV 243
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNPADF LWK + EP W+SPWG GRPGWHIECSAMS+ YLG FDIHGGG DLI
Sbjct: 244 DERKKNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAQYLGNSFDIHGGGEDLI 303
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + + N W+HNGF+N+ G+KMSKS GNFITI +++E
Sbjct: 304 FPHHENEIAQSRAAC-CDSSINYWVHNGFVNVNGQKMSKSLGNFITIRKVIEL------- 355
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------- 339
+ +R+ +L THYR PI++TV++L A L Q
Sbjct: 356 YHPLALRMFLLGTHYRSPINYTVEQLNVASDRLYYTYQTLRDSEESTQQDQSSSGDSLPF 415
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIFN 386
T+ + +++ +DL+T A+ A+ + + K + L
Sbjct: 416 TTTHCIEKLHEDFETSMSDDLHTSVALAAVSEPLKVMNDLLHTRKGKKQEKRLESLAALE 475
Query: 387 A----SAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
+LG+ E ++ K + + + ++ER K K+F +D
Sbjct: 476 EKVRMVLSVLGLMPSSYHEALQQLRGKALRRACVTEEQVLQKIEERTAARKAKQFGRSDE 535
Query: 431 IRKQLESKGFILEDYKNPDNG 451
IR +L + G L D +
Sbjct: 536 IRDELAALGIALMDGPDGTAW 556
>gi|187776555|ref|ZP_02993028.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
15579]
gi|187775214|gb|EDU39016.1| hypothetical protein CLOSPO_00067 [Clostridium sporogenes ATCC
15579]
Length = 465
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 168/487 (34%), Positives = 249/487 (51%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFVTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDSIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I++A +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKKANEEGITV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G+R+
Sbjct: 113 ATEFMDEIIRFVSDLIEKGYAYEIDGDVYFSTKRFGDYGKLSGQNLEELQLGSRINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L + +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGNP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|225017556|ref|ZP_03706748.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
gi|224949706|gb|EEG30915.1| hypothetical protein CLOSTMETH_01483 [Clostridium methylpentosum
DSM 5476]
Length = 464
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 170/478 (35%), Positives = 255/478 (53%), Gaps = 50/478 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ EF+ I P+ + MY CGPTVY++ HIGNARP+IVFD L +
Sbjct: 1 MKVYNTLTRQKEEFKTIHPNEVDMYACGPTVYNYIHIGNARPIIVFDCLRSYFEFRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII++A +E S I+ K +++ KD L T P+
Sbjct: 59 KVKFVQNFTDVDDKIIKKANEEGVEA------SEISEKYIKEYEKDAKGLNVRPATIHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + +I ++Q+++ +G+AYE+ ++ F T+ YG S +++ + G RV
Sbjct: 113 VTQSMDMIIDIVQHLVDNGYAYESQGDVYFRTTKFKEYGKLSHMPLEDLEAGNRVEVSDI 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK + P EP W+SPWG+GRPGWHIECSAM+++YLGK D+H GG DLIFPH
Sbjct: 173 KEDPMDFAVWKAAKPGEPAWDSPWGKGRPGWHIECSAMATNYLGKTIDLHCGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA AN W+HNG++N++ RKMSKS GNF T+ E+ E +
Sbjct: 233 HENEIAQSECATGA-VFANYWMHNGYINVDNRKMSKSLGNFFTVREVAE-------KFGY 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
IR ML HYR PI++ V+ + + + L + +
Sbjct: 285 EPIRYMMLQAHYRSPINYNVEVIEQCKASLERMYNFKKNIAFALSKAEDGEFTDKQKEAI 344
Query: 348 ---DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFNASAHIL 392
+ A+ +D NT AI A+ +L R+ IF+ +L
Sbjct: 345 LARKQQFIDAMEDDFNTADAISAVFELIRDINPLISGETLGSKQHIALAKEIFDELIGVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
G+ + + I + LV++R K K F AD +R ++ G+ +E+ +
Sbjct: 405 GLLYNDKE--EEIPAEVTALVEQRAAARKEKNFKLADELRDRIGELGYAIEETRQGTK 460
>gi|330817521|ref|YP_004361226.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327369914|gb|AEA61270.1| Cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 464
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 186/485 (38%), Positives = 253/485 (52%), Gaps = 48/485 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ HIG+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMMVVFDIVQRWLRQL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +TS+ +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIGELTSRFIAAMHEDLDALGVERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT++IPQM+ +I + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 HEPRATHYIPQMLGMIAALEANGYAYQAKDGDVNYAVRKFANYGRLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P EP W+S +GRGRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKRAKPEEPADTSWDSKYGRGRPGWHIECSAMGCTLLGNHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A E N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-ETFVNTWMHNGFVQVDSEKMSKSLGNFFTIREVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R + THYR P++++ L +A L++
Sbjct: 288 ----KYDAEVVRFFIARTHYRSPLNYSEVHLDDARAALTRLYTALKDVTPDGAPLDPDEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNAS----------AHILGI 394
+A+ +D NT A+ L +LA E + D L F A
Sbjct: 344 HAQRFAAAMNDDFNTALAVSVLFELAGEVNRTRDAALARQFKQLGALLGLLGRDARAFLQ 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + AIE + ER+ + K ++ AD IR L G LED
Sbjct: 404 QATGAGADALDGEAIEACIAERVAAKQAKNYAEADRIRAALLEAGVALEDKPGGL----- 458
Query: 455 TRWKQ 459
T W++
Sbjct: 459 TEWRR 463
>gi|299541906|ref|ZP_07052229.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
gi|298725644|gb|EFI66285.1| cysteinyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
Length = 466
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 169/489 (34%), Positives = 248/489 (50%), Gaps = 56/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+N+L R+ F ++ ++MYVCGPTVY++ HIGN+RP+IV+D + R +Y
Sbjct: 1 MGIQIFNSLTRQKETFVPLEEGKVKMYVCGPTVYNYIHIGNSRPVIVYDTVRRYFQYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDKII+ A + + + + +T + + +D T L C
Sbjct: 61 D--VKFVSNFTDVDDKIIKAANE------LGEEVHELTERFIAAYFEDVTALGCKKADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I IQ +I G+AYE+ ++ + T YG S + +D+ K+G R+
Sbjct: 113 PRVTEHMDDIIQFIQVLIEKGYAYESAGDVYYRTRKFDGYGKLSHQSVDDLKIGARIEAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K + DF LWK + P E W+SPWG GRPGWHIECS M+ +LG DIH GG DL F
Sbjct: 173 EKKDDALDFALWKAAKPGEIFWQSPWGDGRPGWHIECSVMAREHLGDTIDIHAGGQDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNG++N++ KMSKS GNFI +N++ +
Sbjct: 233 PHHENEIAQSE-AHNDKTFARYWMHNGYINIDNEKMSKSLGNFILVNDI-------RKQI 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
++R ML HYR PI+F + A L + +
Sbjct: 285 DPQILRFFMLSVHYRHPINFAKDLVEAAASGLERIRTAYNNVKHRLTTTVSLGDHSEEWL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAH 390
A+ +D NT +AI L ++AR + F
Sbjct: 345 NKITEQKAHFEEAMDDDFNTANAISVLFEVARIANIYLSEANTCKKVLETFIETFEVLGD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGIE KE + I QER+ K + F+ +D IR L+++G ILED +
Sbjct: 405 VLGIEFAKEEELLDEEIEALL--QERVEARKNRDFARSDEIRDHLQAQGIILEDTR---- 458
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 459 --QGTRWKR 465
>gi|94310045|ref|YP_583255.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|93353897|gb|ABF07986.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 472
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 195/481 (40%), Positives = 254/481 (52%), Gaps = 45/481 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +YN+L RK + P + MYVCGPTVY+FAHIGNARP +VFDVL RLLR
Sbjct: 1 MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y E V Y RN TD+DDKI A E I IT++ + +D L L P
Sbjct: 61 YAE--VVYARNFTDVDDKINASAAAEGV------PIGTITARYIDAYHEDMRALGVLIPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T HIP +I LIQ +I +G+AY + ++F S P YG S R+ ++ G RV
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGW SPWGRGRPGWHIECSAM +LG DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ CA+ E W+HN F+ ++G+KMSKS GN + + +LL
Sbjct: 233 IFPHHENEIAQGTCANG-ELYCRTWVHNSFVTVDGQKMSKSLGNVLLLRDLLGQA----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVL 352
P IRLA+L HYR P+D+ QRL A L ++ + I D V+
Sbjct: 287 --PGEAIRLALLSAHYRHPLDWNAQRLLTARQTLLRFYRGLKMAEHIEISPGEEPDEEVI 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEH------ 400
+AL NDLN A+ LH L E K AS +LG+ +
Sbjct: 345 AALNNDLNIPGALARLHVLLAELEKAGADASRSVAKARMMASGRLLGLFQQDPNSALRGL 404
Query: 401 ---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ I+ LV ER K + F+ AD +R++L + G ++ D N
Sbjct: 405 AGAAVTHGIATTADAARIDHLVAEREQARKRRDFARADALREELGAAGVLVHDTPNGSTW 464
Query: 452 Q 452
Sbjct: 465 T 465
>gi|82543006|ref|YP_406953.1| cysteinyl-tRNA synthetase [Shigella boydii Sb227]
gi|109894937|sp|Q324Y3|SYC_SHIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|81244417|gb|ABB65125.1| cysteine tRNA synthetase [Shigella boydii Sb227]
Length = 439
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 167/449 (37%), Positives = 239/449 (53%), Gaps = 42/449 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L + L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQTRAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFS 426
+ + IE L+Q+RL K K ++
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWA 433
>gi|300996966|ref|ZP_07181604.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
gi|300304371|gb|EFJ58891.1| cysteinyl-tRNA synthetase [Escherichia coli MS 200-1]
Length = 461
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDID+KII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDEKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIELTEQLIAKGHAYVADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DDKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGQ-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDKTVAPAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE K D+ + +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|304438773|ref|ZP_07398701.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304372775|gb|EFM26353.1| cysteine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 461
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 172/485 (35%), Positives = 246/485 (50%), Gaps = 55/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R + EF + + MY CGPTVY+F H+GNARP+++FD L R Y +
Sbjct: 1 MKLYNTLSRSLEEFVPVKEGQVNMYNCGPTVYNFIHVGNARPLVIFDTLRRYFIYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
V +V N TDIDDKII RA +EH + I+ + ++F KD L T P
Sbjct: 60 -VNFVVNFTDIDDKIINRANEEHVD------FTEISERYIKEFKKDANGLHLYDYETINP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT I +MI I+ + AY + ++ FD + +YG S++ IDE G R+
Sbjct: 113 RATEMIKEMIEFIKILESKDAAYVLDGDVYFDINKAKDYGKLSKKNIDELMAGARIGVAE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF+LWK+ EP WESPW GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 GKRNPGDFVLWKKKKEGEPSWESPWSEGRPGWHIECSVMAKTILGDTIDIHSGGEDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A+ + AN W+HNG +N++ KMSKS GNF TI E+ + +
Sbjct: 233 HHENEIAQSETANG-KTFANYWLHNGMINVDNEKMSKSKGNFFTIREV-------SKEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------- 349
V+R +L HYR PI+F+ + + + + L + +
Sbjct: 285 LEVLRYFLLTCHYRSPINFSHEVMDQCKASLERMYNAKEKLEKLIENANAGSLDEEVKEL 344
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
A+ +D+NT A+ A+ + + D + N + +LGI
Sbjct: 345 VDAEVKYFEDAMEDDINTADALTAIFNIVKIINTKVDDSSKETLEYVRDSLNKLSKVLGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
E + +S E L ERL K K ++ +D +R +L + G ++D +
Sbjct: 405 L---ERKEEGLSPEEEALFYERLEARKNKDYAKSDELRDKLLAMGIEVKDSR------EG 455
Query: 455 TRWKQ 459
T WK+
Sbjct: 456 TTWKR 460
>gi|319891494|ref|YP_004148369.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161190|gb|ADV04733.1| Cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|323465335|gb|ADX77488.1| cysteinyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
Length = 466
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 173/482 (35%), Positives = 258/482 (53%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ FQ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKEVFQPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ ++P I + Q F +DT L T P
Sbjct: 61 --VNYVSNFTDVDDKLIKRSQELGETVP------EIAERYIQAFYEDTEALNVKKATSNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +H+ +I I+ ++ G+AYE+ ++ F T +YG S + ID+ K+G R+ +
Sbjct: 113 RVMDHMDDIIKFIKKLVDEGYAYESGGDVYFRTRQFEDYGKLSHQSIDDLKVGARIEQGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++ DF LWK++ P E WESP+G GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 NKEDALDFTLWKKAKPGEISWESPFGEGRPGWHIECSVMAFEKLGPTIDIHAGGSDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E AN W+HNGF+N++ KMSKS GNFI +++++ +
Sbjct: 233 HHENEIAQSE-AHNHETFANYWMHNGFINIDNEKMSKSLGNFILVHDII-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------S 343
V+R M+ HYR PI++ ++ + A L + +
Sbjct: 285 PDVLRFFMISVHYRSPINYNLELVEAARSGLERIRNSYQALTERETVATDLTNDATMLTQ 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHIL 392
I + + +D NT +AI A + L + + K +F + +L
Sbjct: 345 IDAILTQFETVMDDDFNTANAITAWYDLVKLANKYLLEDNTSTQVIQRFKEVFAIFSDVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + H+ + IE+L++ER + K ++ AD IR QL+++ ILED +
Sbjct: 405 GVPLTSNHVEGLLDEEIERLIEERNAARQAKDYARADEIRDQLKAQNIILEDTPQGVRYK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|322807828|emb|CBZ05403.1| cysteinyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 465
Score = 375 bits (963), Expect = e-102, Method: Composition-based stats.
Identities = 168/487 (34%), Positives = 247/487 (50%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T ++LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTARQILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKEIVKYTLDLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 PQGVRWK 463
>gi|184154737|ref|YP_001843077.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum IFO 3956]
gi|227514004|ref|ZP_03944053.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
gi|260663234|ref|ZP_05864126.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
gi|229558713|sp|B2GAB5|SYC_LACF3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|183226081|dbj|BAG26597.1| cysteinyl-tRNA synthase [Lactobacillus fermentum IFO 3956]
gi|227087648|gb|EEI22960.1| cysteine--tRNA ligase [Lactobacillus fermentum ATCC 14931]
gi|260552426|gb|EEX25477.1| cysteinyl-tRNA synthetase [Lactobacillus fermentum 28-3-CHN]
Length = 472
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 160/493 (32%), Positives = 250/493 (50%), Gaps = 59/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF + MYVCGPTVY++ HIGNAR ++ FD + R L + +
Sbjct: 1 MLKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEFSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A+++ ++P + K Q +++DT L T P
Sbjct: 61 --VNYVSNFTDVDDKMIKAAKEQGITVP------ELAYKYIQAYMEDTAALNVEPATTHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +I I+++I G+AY++ ++ + +YG S + +D+ ++G
Sbjct: 113 RATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVST 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E W+SPWG GRPGWHIECS MS+ YLG DIH GG D
Sbjct: 173 EEVAKKKDPLDFALWKAAKPGEIKWDSPWGAGRPGWHIECSVMSTKYLGDTLDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS + N W+HNGF+ + + KMSKS GNF+T+++L+
Sbjct: 233 LEFPHHENEIAQSEAKTG-HRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------- 341
+ V+R M T YR PI ++ + L EA+ L T
Sbjct: 287 --KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTDG 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
++A+ +D+N + I +++L R + + + +
Sbjct: 345 GVQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLKR 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ G+++ + I++L+++R K F+ +D IR QL +G ILED
Sbjct: 405 LVAVFGVDLAV-SATEINDEKIKELIEKRNAARAEKDFALSDQIRDQLRDQGIILEDT-- 461
Query: 448 PDNGQRMTRWKQK 460
+ TR++++
Sbjct: 462 ----PQGTRYRKE 470
>gi|16763917|ref|NP_459532.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62179146|ref|YP_215563.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|167990531|ref|ZP_02571631.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|168231534|ref|ZP_02656592.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|168261021|ref|ZP_02682994.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|168818841|ref|ZP_02830841.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|194472796|ref|ZP_03078780.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197251404|ref|YP_002145520.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205351838|ref|YP_002225639.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|207856015|ref|YP_002242666.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224582374|ref|YP_002636172.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|238911333|ref|ZP_04655170.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Tennessee str. CDC07-0191]
gi|21264009|sp|Q8ZR68|SYC_SALTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|81309761|sp|Q57S29|SYC_SALCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710849|sp|B5EYD7|SYC_SALA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710851|sp|B5R6X0|SYC_SALG2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558784|sp|B5QUV0|SYC_SALEP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781692|sp|C0PVI8|SYC_SALPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|16419048|gb|AAL19491.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. LT2]
gi|62126779|gb|AAX64482.1| cysteine tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. SC-B67]
gi|194459160|gb|EDX47999.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CVM29188]
gi|197215107|gb|ACH52504.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Agona str. SL483]
gi|205271619|emb|CAR36445.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 287/91]
gi|205330830|gb|EDZ17594.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar 4,[5],12:i:- str. CVM23701]
gi|205333999|gb|EDZ20763.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Kentucky str. CDC 191]
gi|205343946|gb|EDZ30710.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. HI_N05-537]
gi|205349964|gb|EDZ36595.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Hadar str. RI_05P066]
gi|206707818|emb|CAR32103.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Enteritidis str. P125109]
gi|224466901|gb|ACN44731.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Paratyphi C strain RKS4594]
gi|261245816|emb|CBG23614.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. D23580]
gi|267992259|gb|ACY87144.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 14028S]
gi|301157145|emb|CBW16629.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. SL1344]
gi|312911570|dbj|BAJ35544.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. T000240]
gi|320084812|emb|CBY94602.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Weltevreden str. 2007-60-3289-1]
gi|321226119|gb|EFX51170.1| Cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. TN061786]
gi|322713608|gb|EFZ05179.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Choleraesuis str. A50]
gi|323128857|gb|ADX16287.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. 4/74]
gi|332987486|gb|AEF06469.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhimurium str. UK-1]
Length = 461
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 172/496 (34%), Positives = 249/496 (50%), Gaps = 74/496 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-------------KMKKFSSADYIRKQLESKGFILED 444
+ IE L+Q+RL ++ G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRL-------------AEMGIILED 451
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ------GPQGTTWRRK 461
>gi|90580099|ref|ZP_01235907.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
gi|90438984|gb|EAS64167.1| cysteinyl-tRNA synthetase [Vibrio angustum S14]
Length = 460
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 174/496 (35%), Positives = 246/496 (49%), Gaps = 75/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ F I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEAFTPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALGMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L + +I G AY +N +++F+ S +YG S++ +D+ + G RV
Sbjct: 113 RATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 MAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+R ++ HYR ++++ L +A L + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDTSVEAAGGEEFVTRFKE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKTDDVATASALGARMRELADVLGLLSQEPEAFLQG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYI--------------RKQLESKGFILED 444
+ IE L+Q+R + R +L + G ILED
Sbjct: 405 GAGEDDNVAEIEALIQQR--------------LDARAAKDWAAADEARDKLLAMGIILED 450
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 451 ------GAQGTTWRRK 460
>gi|134296083|ref|YP_001119818.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166200137|sp|A4JFD0|SYC_BURVG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|134139240|gb|ABO54983.1| cysteinyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 465
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 250/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITD+DDKII RA + ++I +T + D L P
Sbjct: 60 GY--RVTYVRNITDVDDKIIRRAVENG------ESIKSLTDRFIGAMHDDEAALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIEQLEANGYAYQASDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKAEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D+NT A+ L +LA E + D L A L
Sbjct: 344 YAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
H + IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QGAGSAHAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|330996564|ref|ZP_08320446.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
gi|329573120|gb|EGG54739.1| cysteine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
Length = 494
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 163/500 (32%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ IYNTL RK EF+ I P + MYVCGPTVY AH+G+ARP I FD+L+R L++
Sbjct: 1 MEQKLFIYNTLSRKKEEFKPITPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + T +F
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVAQYYTNRFHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P AT HI + I L++ I+ +G+AY + + FD +YG S
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKTHHYGKLSG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +++ +R + +K+ DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLEDVINNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + + N W+HN + + G+KM KS GNF
Sbjct: 233 YLGDHFDIHGGGMDLIFPHHECEIAQAVASQGSD-MVNYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
IT+ + + +++ IR +L HYR +DF+ + L +E LS+ +
Sbjct: 292 ITLAQFFSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLSRLMEGVANL 351
Query: 340 -----------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA- 387
+ A+ +DLN+ I L R D +A
Sbjct: 352 KRITPTAGGSVGMAYVDELRRKCYEAMDDDLNSPIVISHLFDACRVINTVVDRKATMSAD 411
Query: 388 ------------SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIR 432
+ ILG++ + ++ L+++R+I K ++++D IR
Sbjct: 412 VLAALAEVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIR 471
Query: 433 KQLESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 DNLAALGFEVKDTKDGFTWK 491
>gi|312868029|ref|ZP_07728233.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
gi|311096433|gb|EFQ54673.1| cysteine--tRNA ligase [Streptococcus parasanguinis F0405]
Length = 447
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 232/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MLKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I G+AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMDDIIRFVADLIEKGYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDPAVLS----- 353
+ V+R HYR+PI+FT + R E + K G +DPA L
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLQGFVDK 344
Query: 354 ---ALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ D+N + I + +LA+ N D+ + + +
Sbjct: 345 FIVAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKMLE----VFGVVFVEEVLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER K F+ AD IR +L ++G L D K R
Sbjct: 401 DIEALIAERQEARAKKDFARADAIRDELAAQGIKLLDTKEGVRWTR 446
>gi|42518493|ref|NP_964423.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
gi|61216256|sp|Q74L26|SYC_LACJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|41582778|gb|AAS08389.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii NCC 533]
Length = 470
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 250/493 (50%), Gaps = 62/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL RK EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y +
Sbjct: 1 MKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR+EH ++ + + + F++DT L T PR
Sbjct: 60 -VNYVSNFTDVDDKMINEARKEHTTVEK------LAERYIKAFMEDTEALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 ATHEIKEIIDFVQDLIDKGVAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHINEE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 287 --KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETLED 344
Query: 347 ---------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
+ A+ +D N +A+ ++ LA + +
Sbjct: 345 NGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKLLI 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
A I G+ +E IEKL+ +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 AWLEIFGVSFKEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRDELQAKGIVIEDT- 461
Query: 447 NPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 462 -----PQGTRWHR 469
>gi|257462531|ref|ZP_05626942.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
gi|317060185|ref|ZP_07924670.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
gi|313685861|gb|EFS22696.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D12]
Length = 473
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 187/495 (37%), Positives = 265/495 (53%), Gaps = 61/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + F + MYVCGPTVY++ HIGNARP IVFD + R Y +
Sbjct: 1 MIKIYNTLSAALDTFVPRKEKEVSMYVCGPTVYNYIHIGNARPAIVFDTVRRYFEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
V YV+N TD+DDK+I+RA +E ++ I + + +++D L +
Sbjct: 61 --VKYVQNFTDVDDKMIKRANEEGSTVE------EIAHRYIEAYLEDMKCLHIKEEGMLR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS-SIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT HI +MI +IQ++I GHAYEAN ++ F S YG+ S++KI++ + G R+
Sbjct: 113 PKATEHIQEMIDMIQSLIDKGHAYEANGDVYFRVSTYHEEYGALSKQKIEDLQSGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS+ Y G FDIHGGG DLI
Sbjct: 173 TELKESPLDFALWKASKPGEPHWDSPWGKGRPGWHIECSAMSNKYFGNSFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C+ A W+HNG++N++G KMSKS GNF+ + ++L +
Sbjct: 233 FPHHENEIAQSKCSCG-GSFAKYWMHNGYINIDGVKMSKSLGNFVLLRDIL-------KH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ VIR ML HYR+P++F+ L +A+I L + + I
Sbjct: 285 FSGKVIRFFMLSAHYRKPMNFSDTELNQAKIALERMENSLIRVHEISEHKIDPQGNSGEE 344
Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASA---- 389
+ A+ D NT AI L +L RE K D + +A
Sbjct: 345 LKKVLKDTEEKFIEAMDEDFNTAQAIGVLFELVRELNKTLDSPYNQEGYEVLKKTATYLY 404
Query: 390 ----HILGIEVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGI V E +N++ +E +++ R K + +D IR +L G ++D
Sbjct: 405 HILYDVLGIAVEVETKVENLTVDLVEFILELRREARAAKNWELSDRIRDRLAELGIQIKD 464
Query: 445 YKNPDNGQRMTRWKQ 459
K+ T W+
Sbjct: 465 GKDS------TTWRV 473
>gi|295694815|ref|YP_003588053.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
gi|295410417|gb|ADG04909.1| cysteinyl-tRNA synthetase [Bacillus tusciae DSM 2912]
Length = 476
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 176/496 (35%), Positives = 248/496 (50%), Gaps = 60/496 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++NTL ++ F+ +P ++MY CGPTVYD+ HIGNAR +VFD++ Y
Sbjct: 1 MPIRVFNTLTKRKEVFEPQEPGVVKMYCCGPTVYDYFHIGNARAFVVFDLVR--RYLRYR 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+N TD+DDKII RA +EH A+ + K + + +D L Q
Sbjct: 59 GYRVTYVQNFTDVDDKIIRRAAEEHM------AVQDLAEKYIRAYFEDAAALGIEPADVQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ ++I +IQ ++ G AY ++ FDTS P+YG S + G RV
Sbjct: 113 PRVTMHMHEIIDMIQALLDKGFAYRIQEDVYFDTSRDPDYGKLSGQDPAALMAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P E W+SPWG+GRPGWHIECSAMS YLG DIH GG DLIF
Sbjct: 173 ERKRHPLDFALWKGSKPGEVAWDSPWGKGRPGWHIECSAMSRTYLGDTLDIHAGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C A W+HNG+L KMSKS GN +T+ ELL +
Sbjct: 233 PHHENEIAQSECVTG-HPFARYWMHNGYLQWNRVKMSKSLGNVVTVRELL-------KRV 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
IRL +L HYR P++F+++ L +A+ L + + G
Sbjct: 285 RPHAIRLYLLSAHYRHPLNFSLELLEQADRGLERIESSLRDLGDWLGPDSSLTGAVTEES 344
Query: 347 -------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---- 389
I A+ +D NT A+ AL++ + + + A A
Sbjct: 345 GHVPGLEVDEVQRIHEKWTEAMDDDFNTAEALGALYEGVGLANRAIREQDVTRAKAWQGW 404
Query: 390 -----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+G+ + ++ IE L+ R K + +++AD IR QL G +LED
Sbjct: 405 LSYHARFMGLIADGQKESETEREKIEALIARRAEARKKRDWAAADRIRDQLSEMGIVLED 464
Query: 445 YKNPDNGQRMTRWKQK 460
RW+++
Sbjct: 465 T------PYGVRWRRR 474
>gi|283852945|ref|ZP_06370204.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|283571635|gb|EFC19636.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 485
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 171/499 (34%), Positives = 242/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NT+ R F + P + MYVCG T YD HIG+AR +VFDVL R LR+ E
Sbjct: 1 MQLFNTMARGKEPFVSRLPGKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII++A E + + I + F +D RL L +PR
Sbjct: 60 -VTFVRNFTDVDDKIIKKANSEGATS------AEIAERYIAAFYEDMDRLGILRADAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +I +M + +I +GHAY ++ F S YG S R +++ + G RV
Sbjct: 113 ATEYIAEMADMAARLIENGHAYRTPSGDVYFRVRSFDGYGKLSGRDVEDMRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK S P EP W+SP+G GRPGWH+ECS MS LG DIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWDSPFGPGRPGWHLECSVMSEKLLGIPIDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + W+HNGF+ + KMSKS GNF+TI + E +
Sbjct: 233 HHENEIAQSEAATGSD-FCRFWVHNGFVRINTEKMSKSLGNFVTIRTIYER-------YL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------------- 341
V+R ++ +HYR P+D++ Q L EAE + +
Sbjct: 285 PEVLRFFLVSSHYRSPLDYSDQALDEAEKGIKRIYAAKGQMEQALTRAKWSETKLPPEIG 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
++ A+ +DLNT AI + L R + + D +L
Sbjct: 345 QELNKLEEGFTGAMDDDLNTAQAIGHVFGLVRLAGRVLDDKTLAKSREAAEALGRILADL 404
Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+ + ILG ++ + + ++ LV ER K K F+ +D IR
Sbjct: 405 DTWSGILGVFGRDSREFLAELKASRLARLGIDAARVDGLVAERQEARKTKDFARSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L G + D
Sbjct: 465 ELAGLGVTVMDTPAGPQWD 483
>gi|206972194|ref|ZP_03233141.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
gi|206732768|gb|EDZ49943.1| cysteinyl-tRNA synthetase [Bacillus cereus AH1134]
Length = 465
Score = 375 bits (962), Expect = e-101, Method: Composition-based stats.
Identities = 173/489 (35%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
+IR ML HYR PI+F+ + L L +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I+ A+ +D NT +AI L+ +A + + +
Sbjct: 345 SEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ KE L + Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKERNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|326626876|gb|EGE33219.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Gallinarum str. 9]
Length = 461
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 172/496 (34%), Positives = 250/496 (50%), Gaps = 74/496 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A ++R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAEIVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-------------KMKKFSSADYIRKQLESKGFILED 444
+ IE L+Q+RL ++ G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRL-------------AEMGIILED 451
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ------GPQGTTWRRK 461
>gi|197263729|ref|ZP_03163803.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
gi|197241984|gb|EDY24604.1| cysteinyl tRNA synthetase [Salmonella enterica subsp. enterica
serovar Saintpaul str. SARA23]
Length = 461
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 172/496 (34%), Positives = 249/496 (50%), Gaps = 74/496 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWSSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 404
Query: 400 --HLNKNISIAIEKLVQERLILL-------------KMKKFSSADYIRKQLESKGFILED 444
+ IE L+Q+RL ++ G ILED
Sbjct: 405 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARDRL-------------AEMGIILED 451
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ------GPQGTTWRRK 461
>gi|296877283|ref|ZP_06901323.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
gi|296431803|gb|EFH17610.1| cysteine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
Length = 447
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 231/466 (49%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+T+ R + EF I+ +RMYVCGPTVY++ H+GNAR + FD + R Y E
Sbjct: 1 MLKIYDTMSRDLREFIPIEEGKVRMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII RA++E + + K F +D T L T P
Sbjct: 61 --VAYISNFTDVDDKIINRAKEEGIT------PQEVADKYIAAFREDVTALGVKPATRHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I + ++I +AYE+ ++ F NY + + +++ ++G
Sbjct: 113 RVVEFMDDIIRFVADLIEKDYAYESQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDE 172
Query: 184 HKKNPADFI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + LWK + P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL
Sbjct: 173 ETARKENPVDFALWKAAKPGEISWDSPWGPGRPGWHIECSVMSTGILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIIDP--------A 350
+ V+R HYR+PI+FT + R E + K G +DP
Sbjct: 285 TIDGQVLRFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGEVDPADLEGFVDK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D+N + I + +LA+ N D+ + + +
Sbjct: 345 FIAAMDEDINAANGITVVFELAKWINSGHYNQDVKDALTKMLE----VFGVVFVEEVLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ ER K F+ AD IR +L ++G L D K R
Sbjct: 401 DIEALIAERQEARAKKDFARADAIRDELAAQGIKLLDTKEGVRWTR 446
>gi|168178810|ref|ZP_02613474.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182669931|gb|EDT81907.1| cysteinyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 465
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 169/487 (34%), Positives = 247/487 (50%), Gaps = 57/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISVIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDT------ 456
Query: 452 QRMTRWK 458
+ RWK
Sbjct: 457 TQGVRWK 463
>gi|171778429|ref|ZP_02919587.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282830|gb|EDT48254.1| hypothetical protein STRINF_00438 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 448
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 157/467 (33%), Positives = 241/467 (51%), Gaps = 36/467 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+T+ R + +F I + + MYVCGPTVY++ HIGNAR ++ FD + R Y
Sbjct: 1 MTIKIYDTMTRSLRDFVPITENTVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y+ N TD+DDKII+ A + K F++D L T
Sbjct: 61 --KVNYISNFTDVDDKIIKGAAAAGMDT------KAFSDKFIAAFMEDVKELGVEPATKN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR +++ ++I +++++ G AYEAN ++ F + NY + + +++ ++G
Sbjct: 113 PRVIDYMDEIIAFVKDLVDKGFAYEANGDVYFRVAKSKNYAKLANKTLEDLEVGASGRVD 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P E W+SPWG+GRPGWHIECS M++ LG DIHGGG D
Sbjct: 173 GEGDIKENPLDFALWKAAKPGEVSWKSPWGQGRPGWHIECSVMATSILGDTIDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L
Sbjct: 233 LEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDML------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
++ V+R + YR+P++FT + + +A + L T T
Sbjct: 285 KTVDGQVLRFFLATQQYRKPVNFTEKAVHDASVNLKYLKNTFTLPLGEAVDSAELEKFKA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ +D NT + I + +A+ + F + G+ +E +
Sbjct: 345 DFEAAMDDDFNTANGITVVFDMAKWINSGNYDQVTKDTFAKILAVFGVVFEEE----VLD 400
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE LV++R + F++AD IR QL ++G L D K+ R
Sbjct: 401 ADIEALVEKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWTR 447
>gi|220930944|ref|YP_002507852.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219992254|gb|ACL68857.1| cysteinyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 484
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 171/505 (33%), Positives = 253/505 (50%), Gaps = 69/505 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL RK +F ++ +RMYVCG TV ++AHIG+ R + +DV+ R L Y E
Sbjct: 1 MLRVYNTLSRKKEKFTPLETGKVRMYVCGLTVQNYAHIGHIRSAVNYDVIRRYLEYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV+N TDI++KI+ RAR+E + K T+ +++D ++
Sbjct: 61 --VTYVQNFTDINEKIVARAREEGL------RPLELADKYTKAYLEDIEKMKIKRADVYC 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+ I ++I +++ ++ G+AYE N + F +YG S R ++E + G RV
Sbjct: 113 RATDTIKEIIKMVKKLLDKGYAYEVNGNVYFSVEKFSDYGKLSGRNLEEMQAGARVEVNE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK++ E W+SPWG+G PGWHIECSAMS YLGK DIHGGG DLIFP
Sbjct: 173 EKRHPMDFALWKKAPAGEISWDSPWGKGWPGWHIECSAMSIKYLGKRIDIHGGGTDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + W+HNG +NL+G KMSKS GNF T+ E+L + +
Sbjct: 233 HHENEIAQSESCTGEKPFVKYWLHNGSVNLKGEKMSKSLGNFFTVREIL-------KEFK 285
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------- 342
+R +L HYR PIDF + + A K T
Sbjct: 286 PDEVRYFLLTKHYRSPIDFNFEEVEAARKSWRKLVNTYQVMVQILEKGVITKNKITENTK 345
Query: 343 -------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NH 379
+ A+ +D NT A +H+LARE
Sbjct: 346 GENTIISILNKKEKEFEEAMDDDFNTARATGVMHELAREINTFVNSPEFELNGETSKVLK 405
Query: 380 DLLPIFNASAHILGIEVC----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+F+ + ILG+++ E N+ ++ ++ +++ R + K + AD IR L
Sbjct: 406 KAQNLFDRFSDILGLDLAFSSSDEVDNEILNNLVDFILEIRDEARQEKNWQLADRIRDGL 465
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
E GF ++D RW++K
Sbjct: 466 EDLGFEIKDT------PHGVRWERK 484
>gi|325288490|ref|YP_004264671.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
gi|324963891|gb|ADY54670.1| cysteinyl-tRNA synthetase [Syntrophobotulus glycolicus DSM 8271]
Length = 476
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 175/488 (35%), Positives = 247/488 (50%), Gaps = 54/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNT+ ++ EF + + MY CGPT Y++ H+GNAR ++VFD++ R L Y
Sbjct: 1 MTVKIYNTIHKEKEEFIPREAGKVAMYACGPTTYNYFHLGNARMLVVFDMVRRYLAYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYV+N TD+DDKII+RA +E N + + +++ KD L T
Sbjct: 61 E--VTYVQNFTDVDDKIIKRASEE------NCEPLALAGRYIEEYYKDANALNIQPATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HI +MI +I+ + G AY ++ F P YG S R +++ + G RV
Sbjct: 113 PKATDHIKEMIEIIKGLEKKGLAYPVEGDVYFAVEHFPQYGRLSGRNLEDLQAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF LWK++ P EP W SPWG GRPGWHIECSAM+ YLG FDIHGGG DL+F
Sbjct: 173 DKKLNPMDFALWKKAKPGEPAWPSPWGDGRPGWHIECSAMALKYLGPNFDIHGGGGDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS E+ A W+HN F+ + KMSKS GNF I ++L + +
Sbjct: 233 PHHENEIAQSEGYLDGEQFARYWMHNAFITVNQEKMSKSLGNFFMIRDIL-------KKF 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
P V+R +L THYR P+DF ++L A L + + G
Sbjct: 286 PGEVVRFYLLGTHYRSPLDFDDEKLEMAARGLDRLKTSVRLAGEALSKGKSTDSAGTRGE 345
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNAS 388
A A+ +D N+ A +L LA+E +
Sbjct: 346 LLNASSKARAAFEEAMEDDFNSAQAYASLFDLAKEINTALNEGGWTGAQIAEARDTLIDL 405
Query: 389 AHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
A ILG ++ K+ + + +E +++ R K +S+AD IR +L+ ILE
Sbjct: 406 AGILGFDLQKDSEVPAGESGKFNAVMELVLELRAKARADKDWSTADLIRDRLKEASIILE 465
Query: 444 DYKNPDNG 451
D
Sbjct: 466 DTAEGSRW 473
>gi|71904305|ref|YP_281108.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
gi|109894951|sp|Q48RA7|SYC_STRPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71803400|gb|AAX72753.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
Length = 447
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F+ AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFAIADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|148381443|ref|YP_001255984.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153933894|ref|YP_001385818.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153937063|ref|YP_001389225.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|187629799|sp|A7FZ91|SYC_CLOB1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629801|sp|A5I7M8|SYC_CLOBH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|148290927|emb|CAL85063.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152929938|gb|ABS35438.1| cysteinyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152932977|gb|ABS38476.1| cysteine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 465
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 166/482 (34%), Positives = 245/482 (50%), Gaps = 51/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL K EF + P ++MYVCGPTVY+F HIGNAR +VFD + R L Y
Sbjct: 1 MKVYNTLTNKKEEFLTLVPGEVKMYVCGPTVYNFFHIGNARTFVVFDTIRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TDIDDK+I+RA +E ++ + + +++ KD L T PR
Sbjct: 59 KVKFIQNFTDIDDKMIKRANEEGSTV------KELGDRFIKEYYKDADDLNIERATKNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + ++I + ++I G+AYE + ++ F T +YG S + ++E ++G R+
Sbjct: 113 ATEFMEEIIKFVSDLIEKGYAYEIDGDVYFSTKKFNSYGKLSGQNLEELQLGARINVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF +WK P EP WESPWG GRPGWHIECS M+ + LG+ DIH GG DL FPH
Sbjct: 173 KKDPMDFAIWKSQKPGEPAWESPWGMGRPGWHIECSCMAYNLLGETIDIHAGGSDLSFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A W+H+ F+N+ +KMSKS NF T E+LE + A
Sbjct: 233 HENEIAQSEARTG-KQFAKYWLHSAFVNVNNQKMSKSLNNFFTAREILE-------KYDA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
V+R+ ML HYR I+F+++ L + L + + + +
Sbjct: 285 DVLRMFMLSGHYRTQINFSMELLDSTKAALDRLYNSINNLENLLDEVKNEELRDEELEYK 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHI 391
+ + +D NT AI + L R+ N + L +
Sbjct: 345 NELQKYKEKYIEKMDDDFNTADAISIIFDLIRDVNTNVTIESSKELVKYTLDLIRELGSP 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + I +ER K K ++ AD IR L+ +G +LED
Sbjct: 405 LGILQESTKASLEEEIEKLI--EERQKARKEKNWALADKIRDNLKERGIVLEDTPQGIRW 462
Query: 452 QR 453
++
Sbjct: 463 KQ 464
>gi|30018360|ref|NP_829991.1| cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218235383|ref|YP_002364939.1| cysteinyl-tRNA synthetase [Bacillus cereus B4264]
gi|33301673|sp|Q81J59|SYC_BACCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735047|sp|B7HJ28|SYC_BACC4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|29893900|gb|AAP07192.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|218163340|gb|ACK63332.1| cysteine--tRNA ligase [Bacillus cereus B4264]
Length = 465
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 173/489 (35%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------TSK 344
+IR ML HYR PI+F+ + L L +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
I+ A+ +D NT +AI L+ +A + + +
Sbjct: 345 AEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ KE L + Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKERNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|269926934|ref|YP_003323557.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269790594|gb|ACZ42735.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 453
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 163/464 (35%), Positives = 237/464 (51%), Gaps = 31/464 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL + EF ++P N+ MYVCGPTVY AHIG+A VFD++ R L Y
Sbjct: 1 MLYIHNTLTDRKEEFIPLNPPNVLMYVCGPTVYGPAHIGHAMSYTVFDIVRRYLEYKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TD+DDKII R+ +E S + ++ ++F++ L L + P
Sbjct: 60 -KVKHVQNFTDVDDKIIARSNEEGIS------WKDLATRYEREFLRQMDSLNILRAHYYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ IP++I IQ +I G+AY + ++ F YG S R++DE + G R+
Sbjct: 113 RASEVIPEIIEDIQRLIARGYAYVVDGDVYFRVLKDEEYGELSHRRLDEMRAGARIEADP 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + EP WESPWG GRPGWHIEC+ M+ LG+ DIHGGG DLIFP
Sbjct: 173 RKEHPMDFALWKSAKLGEPYWESPWGPGRPGWHIECTTMNLRMLGEQIDIHGGGADLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS WIHNG L LE KM++S GN ++I+ ++ R +
Sbjct: 233 HHENEIAQSEAITGKHPFVRYWIHNGLLQLEEEKMARSVGNVLSIDFIV-------RQYG 285
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSAL 355
A RL +L +HYR+P++F+ + L A+ + + Q SA+
Sbjct: 286 ADAFRLFVLSSHYRKPLNFSFEALESAKRGVLRLYQAVGEDAGPAGSEFKDFRQRFESAM 345
Query: 356 YNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHILGIEVCK-EHLNKNISI 407
+D NT AI L +LAR+ + + +LG+ +
Sbjct: 346 DDDFNTPQAIAVLFELARDVNALRSEGKDASTAAGLLRELSALLGLRLDSVGGEATEAEP 405
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
I+ +V R L + + +DYIR +L G + D
Sbjct: 406 FIDLIVGVRDKLRASRIYELSDYIRDKLGELGVSVMDTPEGSKW 449
>gi|329849853|ref|ZP_08264699.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
gi|328841764|gb|EGF91334.1| cysteinyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
Length = 465
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 194/481 (40%), Positives = 263/481 (54%), Gaps = 42/481 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K++I++TL R EFQ +P + +YVCGPTVY +AHIGNARP++VFDVL+RLLR YG
Sbjct: 1 MKLQIHDTLRRDKVEFQPQNPQRVTLYVCGPTVYSYAHIGNARPVVVFDVLFRLLRTIYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y RNITD+DDKI + A + I +IT+ + +D L L PT +
Sbjct: 61 EDHVIYARNITDVDDKINKAAMDQGVE------IDVITNHFADIYNQDMATLGALRPTLE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+++ ++ I I+ +GHAY ++FD S YG+ SRR +D+ G RV
Sbjct: 115 PRVTHNMAAIVDQIAAIVANGHAYAEQGHVLFDVESFKTYGALSRRSVDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF+LWK S EP W+SPWG GRPGWHIECSAM LG DIHGGG DLIF
Sbjct: 175 PYKRNPQDFVLWKPSKTGEPVWDSPWGPGRPGWHIECSAMIEANLGLPIDIHGGGHDLIF 234
Query: 243 PHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
PHHENEIAQ CA + A+ W+HNGFL +G KMSKS GN +++L+
Sbjct: 235 PHHENEIAQGLCAQHAHGHDSEYAHYWMHNGFLTFDGDKMSKSLGNVKLVHDLI------ 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-------AEILLSKWPQTSTSKGIIDPAV 351
+ P VIR A+L HYR P+D+T + + + L K+ PAV
Sbjct: 289 -KQVPGEVIRAALLSAHYRGPLDWTGELIAQTQSRLDGMYGTLRKFAAVPVRDEATPPAV 347
Query: 352 LSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIEV------CKE 399
L AL +DLNT A L LA+ A+ +LG+ K
Sbjct: 348 LEALSDDLNTPRAFAELSALAKALETAADDAARIAAKSQLLAAGKVLGLLQGDAEAWFKA 407
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++++++ I+ L+ ER+ K +S AD IRK L+ G + D WK
Sbjct: 408 GVDEDLTVKIDALIAERIAARTAKNWSEADRIRKALDELGVEVMDSATGA------TWKL 461
Query: 460 K 460
K
Sbjct: 462 K 462
>gi|254422183|ref|ZP_05035901.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
gi|196189672|gb|EDX84636.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7335]
Length = 486
Score = 374 bits (961), Expect = e-101, Method: Composition-based stats.
Identities = 169/502 (33%), Positives = 243/502 (48%), Gaps = 65/502 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F+ + P + MY CG TVYD+ H+G+AR IV+D + R L +
Sbjct: 1 MSVVIYNTLSRQKEAFKPLSPEQVTMYCCGVTVYDYCHLGHARSYIVWDTIRRYLSWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDKI+ RARQE N ++ + + T + +D RL L
Sbjct: 61 --NVRYVQNFTDIDDKILNRARQE------NSSMEAVAKEYTTAYFEDMARLNILEADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
AT+ I + LI + G+AY A ++ + YG S RK+D+ + G
Sbjct: 113 TYATHTIDGIKRLIHQLEQKGYAYSAKGDVYYSVRKFEGYGKLSGRKLDDMEAGRSGRVG 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK + P EP WES WG GRPGWHIECSAM LG DIH GG
Sbjct: 173 TQADSIKQDPFDFALWKSAKPDEPAWESTWGPGRPGWHIECSAMVRDRLGDTIDIHMGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNG +N++G KMSKS GNF TI LL+ +
Sbjct: 233 DLQFPHHENEIAQSEAATG-KPLATYWMHNGMVNVDGTKMSKSLGNFTTIRNLLDAEAAP 291
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQTSTSKGII 347
+R+ ++ + YR P+DFT + + A+ S +K
Sbjct: 292 ----DPMAVRMFVMQSQYRMPLDFTEEAIVAAKKGWSTLNEGLNFGVRHGEDLGWAKAAA 347
Query: 348 DPAVLS------------ALYNDLNTVSAIQALHKLARESTKNHDLL------------- 382
D + ++ +D NT AI L LA+E + +++
Sbjct: 348 DEIAVDALDQAAVEQFRISMDDDFNTPGAIAVLFGLAKELQRQSNVIIHEGAADANPAEL 407
Query: 383 ----PIFNASAHILGIEVCK-EHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A +LG+E E ++ + IE L+ +R + K ++ +D IR +L
Sbjct: 408 QQQWQTLVTLAGVLGLEAQAIESVDAGVLSEAEIETLIAQRANAKQAKNYAESDRIRDEL 467
Query: 436 ESKGFILEDYKNPDNGQRMTRW 457
+++G L D +T W
Sbjct: 468 KAQGITLIDKPGG-----VTAW 484
>gi|152979432|ref|YP_001345061.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
gi|187629819|sp|A6VQ79|SYC_ACTSZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150841155|gb|ABR75126.1| cysteinyl-tRNA synthetase [Actinobacillus succinogenes 130Z]
Length = 459
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 179/486 (36%), Positives = 248/486 (51%), Gaps = 58/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I+ + + MYVCG TVYD H G+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTREKEEFKPINQNQVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 60 -NLRYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I ++ ++ GHAY A+ +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIIAMVDALLQRGHAYLAADGDVMFDVESFQKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S LG FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKELGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA E N W+H G L + KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPA------VLS 353
A +R L YR +D++ + + A L + +
Sbjct: 285 DAESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCDWNSELPAQDQYVGAFKD 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A+ L +LARE K + L A +LG+
Sbjct: 345 AMDDDFNTPGALAVLFELAREINKLKAENPAQANHLAARLKHLAGVLGLLEQDPEAFLQG 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKF------SSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+++R K + L+ G +LED G
Sbjct: 405 GAENEEVGKIEALIKQRNDARAEKNWAAADAARD------ALKEMGVVLED------GAN 452
Query: 454 MTRWKQ 459
T W++
Sbjct: 453 GTSWRK 458
>gi|269122241|ref|YP_003310418.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
gi|268616119|gb|ACZ10487.1| cysteinyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
Length = 465
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 182/477 (38%), Positives = 259/477 (54%), Gaps = 46/477 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K YNTL + EF+ I+P ++MYVCGPTVY++ HIGNARP++VFD+L R R+
Sbjct: 1 MKFYNTLTNQTEEFKPIEPGKVKMYVCGPTVYNYIHIGNARPIVVFDILARYFRHK--NY 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDDK+I +A +E ++ I + + F++DT +L A +P+
Sbjct: 59 VVEYVQNFTDIDDKMINKANEEGKTV------REIADRYIEAFLEDTKKLNISADIIRPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I MI I+ +I G+AYE N +++FD + YG S +K D+ + G R+ +
Sbjct: 113 ATEYIEDMIITIEALIDKGYAYELNGDVLFDVTKYSEYGKLSNQKTDQLEAGARIEVGEN 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK EP W++PWG GRPGWHIEC+AMS Y G FDIHGGG DLIFPH
Sbjct: 173 KRNPQDFVLWKNKKKGEPFWKAPWGEGRPGWHIECTAMSHKYFGLNFDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ CA AN W+HNG++ L+G KMSKS GNF + ++LE +
Sbjct: 233 HENEIAQARCAYG-GNFANYWLHNGYIQLDGEKMSKSKGNFFLLRDVLE-------EFDG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------G 345
V R + THYR+PI+F+ + + A+ L K
Sbjct: 285 NVFRWFLAGTHYRKPINFSKEDMLAAKAALEKINGALLRAKDFIIENNTKYDNILEGSIK 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
A+ +DLNT A+ +H+ RE K D + I + A++LGI
Sbjct: 345 EFSEKFDQAMEDDLNTPLAVSLIHEFLREINKFIDNYGKSVIIKEAVAVINDRMANVLGI 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E+ + L S ++ + R K F +D IR +L G L+D K+
Sbjct: 405 ELKESGLEDLSSSLLDLFIYIRKEARSEKNFKLSDLIRDKLSELGIELKDNKDGTTS 461
>gi|139474431|ref|YP_001129147.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
gi|134272678|emb|CAM30949.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
Length = 447
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRIDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + L +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKALHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARTNRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|152969054|ref|YP_001334163.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206578467|ref|YP_002239997.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|262041635|ref|ZP_06014829.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288936751|ref|YP_003440810.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
gi|187629829|sp|A6T5R2|SYC_KLEP7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226710845|sp|B5Y0K6|SYC_KLEP3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150953903|gb|ABR75933.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
MGH 78578]
gi|206567525|gb|ACI09301.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae 342]
gi|259041024|gb|EEW42101.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|288891460|gb|ADC59778.1| cysteinyl-tRNA synthetase [Klebsiella variicola At-22]
Length = 461
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 176/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQVDDAEVAEIESLIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|292670589|ref|ZP_06604015.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
gi|292647755|gb|EFF65727.1| cysteine-tRNA ligase [Selenomonas noxia ATCC 43541]
Length = 475
Score = 374 bits (960), Expect = e-101, Method: Composition-based stats.
Identities = 169/495 (34%), Positives = 245/495 (49%), Gaps = 60/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ RK EF + + +Y CG T Y+ HIGNARP + +DV+ R L
Sbjct: 1 MLTVYNTMTRKKEEFHPLRTGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRFLSRKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A +E + I+ + + K L P
Sbjct: 60 -RVRYIQNFTDVDDKIINAANREGVT------WKEISDRYIAAYFKAMDALNVRRADVFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + + ++I +I+ +I G AY ++ + + +YG S R +++ + G RV
Sbjct: 113 RVSETMAEIIRMIETLIERGFAYVTGAGDVYYRVEAFAHYGRLSGRSLEDMEAGARVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMS YLG+VFD HGGG DLIF
Sbjct: 173 ETKEHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEVFDFHGGGNDLIF 232
Query: 243 PHHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQ C D EK A W+HNGF+ ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQAEPCIDGDEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
+P VIR +L THYR P+DF+ +RL EA+ L +
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLHEAQAALDRLHNVHDVIVEFSSREGTADTAAELA 345
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFN 386
+A+ +D NT AI + LA+E + H F
Sbjct: 346 AQAETFLHDFDAAMDDDFNTALAISQMFGLAKEINRYHQEVERGTSFDAANFKKAADAFY 405
Query: 387 ASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I+GI +E + + ++ ++ R K ++ AD IR L++ G ++ED
Sbjct: 406 TMAEIIGIFEQEEMVADDGLADALMDIIIGIRQEARAAKNWAVADKIRDGLKNAGVVIED 465
Query: 445 YKNPDNGQRMTRWKQ 459
RWK+
Sbjct: 466 TPT------GVRWKR 474
>gi|258543649|ref|YP_003189082.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
gi|256634727|dbj|BAI00703.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
gi|256637783|dbj|BAI03752.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
gi|256640837|dbj|BAI06799.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
gi|256643892|dbj|BAI09847.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
gi|256646947|dbj|BAI12895.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
gi|256650000|dbj|BAI15941.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
gi|256652990|dbj|BAI18924.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256656044|dbj|BAI21971.1| cysteinyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
Length = 477
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 200/465 (43%), Positives = 272/465 (58%), Gaps = 31/465 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++ R F IDP+++++Y CGPTVYD AHIGN R M+ DVL RLLR+ Y
Sbjct: 33 LSLHDSQSRATVPFTPIDPAHVKVYYCGPTVYDLAHIGNLRAMLTADVLVRLLRHVY--P 90
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRNITD+DDKI RAR + I +T + T++F +D + L P +PR
Sbjct: 91 RVTFVRNITDVDDKITARARANG------EDIGSLTQRTTEEFHQDLASMNVLPPDIEPR 144
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I +M +I +I +GHAYEA ++F S P+YG+ S R +E + G RV +
Sbjct: 145 ATHNIGEMQAMIARLIENGHAYEAEGHVLFSVGSFPSYGALSGRNPEELEAGARVEVAPY 204
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK P DF+LWK S +PGWESPWGRGRPGWHIECSAMS YLG FDIHGGG DL+FPH
Sbjct: 205 KKAPGDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHRYLGDSFDIHGGGSDLLFPH 264
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQS C K AN W+HN L +EG KMSKS GNF+TI ++L PA
Sbjct: 265 HENERAQSLCCFPHGKFANYWVHNAMLLVEGEKMSKSLGNFLTIRDVLAQA-------PA 317
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYNDLN 360
+RL +L HYR +++T L EA L ++ + + + V+ AL +DLN
Sbjct: 318 EALRLLLLGAHYRSTLNYTQAGLQEARKTLDRFYRALAAGPVPETDVPEGVMQALADDLN 377
Query: 361 TVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQ 414
T AI LH LA ++ + A A +LG+ + AIE L+
Sbjct: 378 TPKAIAELHALAAQALAGDRQAAGALKAGAGMLGLLQGDPEQWFKGDACDEDAAIEALIN 437
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
ERL K + F+ AD +R QL+++G +LED K+ T W++
Sbjct: 438 ERLAARKARDFAKADALRDQLQAQGIVLEDTKD------GTSWRR 476
>gi|94991232|ref|YP_599332.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
gi|94544740|gb|ABF34788.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
Length = 447
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AY A+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYAADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADVIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|290510194|ref|ZP_06549564.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
gi|289776910|gb|EFD84908.1| cysteinyl-tRNA synthetase [Klebsiella sp. 1_1_55]
Length = 461
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 176/494 (35%), Positives = 250/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G +LED
Sbjct: 405 GAQVDDAEVAEIESLIQQRLNARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|260596903|ref|YP_003209474.1| cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
gi|260216080|emb|CBA28825.1| Cysteinyl-tRNA synthetase [Cronobacter turicensis z3032]
Length = 461
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 175/494 (35%), Positives = 251/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R I FDV+ R LR+
Sbjct: 1 MLKIFNTMSRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFIAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + + + + D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------EDFVALVDRMVAEMHNDFDALNILRPESEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I GHAY A N +++F S +YG SR+ +++ + G RV
Sbjct: 113 RATQHIPEIIEIVEQLIARGHAYVAGNGDVMFAVESDADYGKLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DSKRNPMDFVLWKMSKPGEPSWPSPWGDGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDRSVAAAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKAEDSSAANQLAAHLRKLAAVLGLLEQEPEQFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
N + IE L+ +RL + +L G +LED
Sbjct: 405 GAQTNDDEVAEIEALIVKRLEARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|94995145|ref|YP_603243.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
gi|94548653|gb|ABF38699.1| Cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
Length = 447
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 239/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLHKFVPLTENTVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL ++G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAAQGIKLLDTKDGVRWLR 446
>gi|313896271|ref|ZP_07829824.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312975070|gb|EFR40532.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 475
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 168/495 (33%), Positives = 243/495 (49%), Gaps = 60/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ RK EF + + +Y CG T Y+ HIGNARP + +DV+ R L
Sbjct: 1 MLTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A + + I+ + + L P
Sbjct: 60 -RVRYIQNFTDVDDKIINAANRAGVT------WKEISDRYIAAYFTAMDALNVHRADVFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + + +I ++ +I G+AY + ++ + +YG S R +D+ + G RV
Sbjct: 113 RVSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARVEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS YLG+ FD HGGG DLIF
Sbjct: 173 ETKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232
Query: 243 PHHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQ C D EK A W+HNGF+ ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+P VIR +L THYR P+DF+ +RL EAE L++ T +
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLREAEAALARLAHTKEVVDELSGREGTADTAAALV 345
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------IFN 386
A +A+ +D NT A+ + L++E + L +
Sbjct: 346 AQAKDFLTAFDAAMDDDFNTALALSQMFGLSKEINRYRQELEHGTAFDAAHFAEAADAYR 405
Query: 387 ASAHILGIEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I+GI + +E ++ R K ++ AD IR +L+ +G +LED
Sbjct: 406 TMAEIIGIFEQEPAAVEGGLADGLMEIIIALRQDARVQKNWALADRIRDELKERGVVLED 465
Query: 445 YKNPDNGQRMTRWKQ 459
RWK+
Sbjct: 466 TPT------GVRWKR 474
>gi|323339370|ref|ZP_08079655.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|323093193|gb|EFZ35780.1| cysteine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
Length = 470
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 166/493 (33%), Positives = 245/493 (49%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+I NTL K F+ ++ ++MYVCGPTVY++ HIGNAR + FD + R Y E
Sbjct: 1 MIQILNTLSGKKEIFKPLEEGKVKMYVCGPTVYNYIHIGNARSAVAFDTVRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+ + + +T K F +D L T P
Sbjct: 61 --VDYVSNFTDVDDKIIKA------GHEMKMTVKEVTDKFIAAFYEDIDALNIKRATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + + +I IQ +I G+AY++ ++ + +YG S + +D+ + G
Sbjct: 113 RVMDTMDDIIKFIQVLIDKGYAYQSEGDVYYRARKFKDYGKLSGQSVDDLEQGASERVAD 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E WE+P+G GRPGWHIECS M++ YLGK DIH GG D
Sbjct: 173 FDQGKKEDPLDFALWKAAKPGEIYWEAPFGNGRPGWHIECSVMATKYLGKTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + E KMSKS GNF+T+++LL
Sbjct: 233 LEFPHHENEIAQSEAETG-QKFVNYWMHNGFVTIGEEDEKMSKSLGNFVTVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ V+R M T YR PI ++ L EA+ L K +
Sbjct: 287 --KKVDPQVVRFFMATTQYRHPIRYSQANLAEAKTNLQKLKTAVDNLRYRKNDAEKSDVE 344
Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ + A+ +D NT + I ++++A+ + + F+
Sbjct: 345 NEIREKFSALKNRFIEAMDDDFNTQNGIAVIYEMAKLLNVYSEKATVSLETIEYLLDGFS 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+A + GI+ +E + + IE L++ER+ K + F+ +D IR L+ KG ILED
Sbjct: 405 KAAEVFGIKFEEE--TELLDEKIEALIEERIAARKARNFAQSDEIRDMLKEKGVILEDT- 461
Query: 447 NPDNGQRMTRWKQ 459
+ TRWK+
Sbjct: 462 -----PQGTRWKR 469
>gi|225848506|ref|YP_002728669.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225644318|gb|ACN99368.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 487
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 174/508 (34%), Positives = 248/508 (48%), Gaps = 73/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL K +F I P +++Y CG TVYD+ H+G+ R +IVFD++ R LRY
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPPQVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA+ E ++I+ K +++ D + +
Sbjct: 61 --NVIFVRNFTDVDDKIINRAKNECV------PFTVISDKYIKEYFDDAEKFRIEPADIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ +I G+AYE + ++ F +YG S+R IDE G R+
Sbjct: 113 PRVTTHIPDIIKFIQELIDKGYAYEVDGDVYFSVRKFKDYGKLSKRSIDELLAGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK + EP WESPWG+GRPGWH EC AM +LG+ DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A WIHNG + + G+KMSKS GN++T+ E+ +
Sbjct: 233 PHHENEIAQAESLTG-KPFARYWIHNGLVTVNGQKMSKSLGNYVTLKEIYS-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
++RL +L HYR P+DF+ ++ E + + I+
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIQEYEILQKLPTDENFEEDLYT 344
Query: 350 -------AVLSALYNDLNTVSAIQALHKLAREST------------------KNHDLLPI 384
SA+ +D NT A+ +L L R+ +
Sbjct: 345 EIQKAQSGFYSAMSDDFNTPEALASLFGLVRQMNILKDKAIKQGGISKKALQSYKEAADT 404
Query: 385 FNASA-HILGIEVC------------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ I G+ ++ K I L++ R K K+FS AD I
Sbjct: 405 LHNICRDIFGLFDSLQPCVKTEEIKVEKQEEKLDEDLINILIEVRDKARKEKQFSIADTI 464
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R +L KG ++ED T+WK+
Sbjct: 465 RDKLAEKGIVIEDT------PFGTKWKK 486
>gi|301051827|ref|YP_003790038.1| cysteinyl-tRNA synthetase [Bacillus anthracis CI]
gi|300373996|gb|ADK02900.1| cysteinyl-tRNA synthetase [Bacillus cereus biovar anthracis str.
CI]
Length = 465
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 172/489 (35%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFTPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 ADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELAQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKDRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|240850206|ref|YP_002971599.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
gi|240267329|gb|ACS50917.1| cysteinyl-tRNA synthetase [Bartonella grahamii as4aup]
Length = 502
Score = 374 bits (959), Expect = e-101, Method: Composition-based stats.
Identities = 222/505 (43%), Positives = 301/505 (59%), Gaps = 51/505 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+++ YNTL RK F IDP+ +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ Y
Sbjct: 1 MKELRFYNTLTRKKENFTPIDPTRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G + V Y RNITD+DDKI RA E+P++ +NDAI +T + QF +DT L CL PT
Sbjct: 61 GNEHVLYARNITDVDDKINARAVFEYPNLSLNDAIRQLTERTYCQFQQDTIALGCLLPTS 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRRKIDEQKMGTR 178
QPRAT H+ +M LI+ ++ GHAY+A N I+F SSI N F+ R +DE + G R
Sbjct: 121 QPRATEHLEEMRSLIERLLEKGHAYKAENHILFSVSSIKNPPHYGAFANRSLDEMRAGAR 180
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIECSAM------------- 222
+ +K+ DF+LWK S EPGWESP G RPGWHIECSAM
Sbjct: 181 IDVAAYKREEMDFVLWKPSVEGEPGWESPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGL 240
Query: 223 -SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
VFDIHGGGLDLIFPHHENEIAQSC A E+ AN W+HNGFL +EG+KMSKS
Sbjct: 241 TCDDPTANVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKS 300
Query: 282 NGNFITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
GNFITI +LE ++W R +ML THYREP+++T QRL ++
Sbjct: 301 FGNFITIRSVLENNFLEFNGILIDEMKKNWAGLSARFSMLQTHYREPLNWTAQRLIQSSG 360
Query: 333 LLSKWPQT-------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
L +W + + I+ ++ AL +DLNT A+ L K +E
Sbjct: 361 ELYRWYELLRSKKSEMENNEAINDTLIDALSDDLNTPKALTLLRKFYKEGN-----ALAL 415
Query: 386 NASAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ++LG+ + + S I++ + ERL L+ K++ +AD IR +L
Sbjct: 416 SNGMNLLGLLRQEWIKEIDCPLFIKKTFLDSKFIDQRIAERLRLIHNKEWEAADTIRDEL 475
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
++G +L+D K+P +G+R+T W+ K
Sbjct: 476 AAEGVLLKDSKDPQSGERITVWEIK 500
>gi|310779627|ref|YP_003967960.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309748950|gb|ADO83612.1| cysteinyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 475
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 171/489 (34%), Positives = 261/489 (53%), Gaps = 57/489 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL+ K+ EF+ + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MLRIFNTLKGKVEEFKPLKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
V YV+N TD+DDK+I+RA +E ++ + K + +DT ++ +
Sbjct: 60 -NVKYVQNFTDVDDKMIKRANEEGITL------KEVADKYIAAYFEDTAKVNLKEDGMLR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT HI +MI LI+ +I AYE ++ F + YG S++ ++ + G+RV
Sbjct: 113 PKATEHIGEMIKLIKTLIEKDFAYEVQGDVYFSVKNYNEKYGELSKQNTEDLQSGSRVDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + EP W SPWG+GRPGWHIECSAMS+ YLG FDIHGGG DLI
Sbjct: 173 NDIKRSPLDFALWKAAKEGEPSWGSPWGKGRPGWHIECSAMSNKYLGPTFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA + A WIHNG++N++G KMSKS GNF + E+LE
Sbjct: 233 FPHHENEIAQSKCATGGD-FARYWIHNGYINVKGEKMSKSLGNFFLLREVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ V+R +L +HYR+PIDF+ L +A+ + + +
Sbjct: 285 YEGKVVRFFVLSSHYRKPIDFSEDELNQAKAAVERIENSLMRVLEKMDERDSIGDHLAVE 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAH- 390
++A+ D NT I ++ +L +E K + + + A++
Sbjct: 345 SLAKALEESKTKFVAAMDEDFNTSQGIGSIFELIKEMNKFMDGTSLDAEGREVLTAASDF 404
Query: 391 -------ILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+LG+++ E N+ S ++ +++ R + ++ +D IR +L G +
Sbjct: 405 IKEAIIEVLGVDIKVEKKVGNMTSELVDFILEIRQNARVERNWALSDKIRDRLGDMGVKI 464
Query: 443 EDYKNPDNG 451
+D K+
Sbjct: 465 KDGKDKTTW 473
>gi|158337192|ref|YP_001518367.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|158307433|gb|ABW29050.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 504
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 177/518 (34%), Positives = 255/518 (49%), Gaps = 74/518 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R F ++ ++ Y CG TVYD+ H+G+AR IV+D++ R L++
Sbjct: 1 MPLQIYNTLSRTKEPFTTLEAGKVQFYCCGVTVYDYCHLGHARSYIVWDIVRRYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TDIDDKI++RA + +T Q + D RL LA
Sbjct: 61 D--VTYVQNYTDIDDKILKRAAETGQD------WQAVTQTFIQAYEADMARLNILAADAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
P+AT IP +I LI+++ G AY A ++ F P YG S R +D+ +
Sbjct: 113 PKATESIPAIINLIRDLETRGVAYAAQGDVYFAVERFPGYGKLSGRLLDQMEAGASGRVE 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P + K++P DF LWK + P EP W+SPWG GRPGWHIECSAM + LG DIH G
Sbjct: 173 QLEPAEQKKRHPLDFALWKATKPGEPSWDSPWGPGRPGWHIECSAMVNQCLGAEIDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK- 295
G DL+FPHHENEIAQS A + A W+HNGF+N+ G KMSKS GNF TI +LL+T
Sbjct: 233 GSDLVFPHHENEIAQSE-AGLTPRLARYWMHNGFVNVGGEKMSKSLGNFTTIRQLLDTPL 291
Query: 296 -KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSK 344
G++ +RL +L YR+PIDFT + A+ +
Sbjct: 292 PILAGKTLHPMALRLFVLQAQYRKPIDFTDDAIAAAQQSWQTLKEGLLFGYDYGAQLQWS 351
Query: 345 GIIDPAVLSA------------------LYNDLNTVSAIQALHKLARESTKNHDLLP--- 383
DP + + +D N+ S + L +LA++ K ++L
Sbjct: 352 DYTDPDFGNPANMRIPDPNVAVQRFQLAMDDDFNSPSGLVVLFELAKDLRKAGNILSHQG 411
Query: 384 --------------IFNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
A +LG+E + + AIE L++ER +
Sbjct: 412 ETSTTSEQLREQWQTLVCLAQVLGLEAQPDSDAASTDSEDGLSEQAIEALIEERQAARQA 471
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ +D IR QL+++G L D +TRW ++
Sbjct: 472 KNYAESDRIRDQLKAEGITLIDQAGG-----VTRWLRE 504
>gi|238898628|ref|YP_002924309.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
gi|259511836|sp|C4K6G8|SYC_HAMD5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229466387|gb|ACQ68161.1| cysteinyl-tRNA synthetase [Candidatus Hamiltonella defensa 5AT
(Acyrthosiphon pisum)]
Length = 461
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 183/483 (37%), Positives = 258/483 (53%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT RK F I P+ + MYVCG T+YD HIG+AR +VFDV+ R LRY
Sbjct: 1 MLKIFNTFNRKKELFTPIHPNTVGMYVCGVTIYDLCHIGHARTFVVFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRNITDIDDKII+RA Q H + +T++ ++ +D L L P +P
Sbjct: 60 -SLTYVRNITDIDDKIIQRASQNH------QSCEALTAQMLKEMYRDFDELNLLRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI +MI L Q ++ +AY AN +++F P+YG SR+ +++ + G RV
Sbjct: 113 RATEHITEMITLTQQLLDQKYAYVAANGDVLFSVEKNPHYGLLSRQNLEQLQAGARVEVM 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK S P EP W SPWG GRPGWHIECSAM++ LG FDIHGGG DL+F
Sbjct: 173 ESKHHPMDFVLWKMSKPNEPHWPSPWGEGRPGWHIECSAMNAKALGPHFDIHGGGADLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA + N W+H+G + + KMSKS NF TI +LL + +
Sbjct: 233 PHHENEMAQSICAHKA-PYVNCWMHSGMIMINKEKMSKSLNNFCTIRDLL-------QRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVLS 353
+R +L HYR P+++T + L +A I L++ + +S
Sbjct: 285 DPETLRYFLLSAHYRSPLNYTEENLKQARIALTRLYTALRDTNQKAFPEGGESFEKRFVS 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCK------- 398
A+ +D NT A L ARE K L +LG+
Sbjct: 345 AMNDDFNTPEAYAVLFDTAREINKLKKEHPKAADGLAAQLRKMGKVLGLLESGSLLSLLN 404
Query: 399 -EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
E +++ S I L+++R + K + AD R +L G ++ED +N T W
Sbjct: 405 PEKDDRHQSAEIADLIEKRNLARAHKNWEEADNARTRLFEMGVVVEDTEN------GTNW 458
Query: 458 KQK 460
+++
Sbjct: 459 RRR 461
>gi|326802927|ref|YP_004320745.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
gi|326651090|gb|AEA01273.1| cysteine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
Length = 471
Score = 373 bits (958), Expect = e-101, Method: Composition-based stats.
Identities = 153/494 (30%), Positives = 240/494 (48%), Gaps = 63/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL + EF I+ + MYVCGPTVY++ HIGNAR ++ FDV+ R L Y E
Sbjct: 1 MLTVYNTLTKAKEEFHPINAGKVNMYVCGPTVYNYIHIGNARSIVAFDVIRRYLEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII+R+++E + + K + +D +L T P
Sbjct: 61 --VNFVSNFTDVDDKIIKRSQEEGITS------RQVADKYIAAYYEDIDKLNVKRATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +I +I +Q+++ +AY + ++ + S +YG S + ID+ + G
Sbjct: 113 RVLENIDAIIEFVQDLVDKDYAYVVDGDVYYRARSFSSYGKLSDQSIDDLRSGASERVSA 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ DF LWK + EP W+SPWG GRPGWHIECS MS+ YL DIHGGG D
Sbjct: 173 DEQGKKEDSVDFALWKAAKAGEPSWDSPWGAGRPGWHIECSVMSTRYLADTLDIHGGGAD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKF 297
L+FPHHENE AQS + N W+HNGF+ + KMSKS GNF+ ++LL
Sbjct: 233 LVFPHHENERAQSEARTG-KTFVNYWLHNGFVTMGDDGEKMSKSLGNFVLAHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ ++R + HYR P+ F+ L EA+ L + +
Sbjct: 287 --KEVDPTIVRFFLASAHYRAPLKFSHSNLEEAQRNLERLQTAHDNINYRLQDAKESLAD 344
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNA----- 387
+D + + +D N +A+ +++ + + + A
Sbjct: 345 DEKQLGELQALDEHFIQVMDDDFNVPNALTVIYEALKRINIYMEAPQVSQAVLKAYDQQL 404
Query: 388 --SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I+GIE + + + ++ L++ER K + +D IR++L +G IL+D
Sbjct: 405 SQWLAIIGIEFQEASI---LDSEVQALIEERDQARLDKNYDRSDAIRQELLDQGIILDDT 461
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 462 ------PQGTRWRR 469
>gi|320530264|ref|ZP_08031333.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
gi|320137479|gb|EFW29392.1| cysteinyl-tRNA synthetase [Selenomonas artemidis F0399]
Length = 475
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 165/495 (33%), Positives = 244/495 (49%), Gaps = 60/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ RK EF + + +Y CG T Y+ HIGNARP + +DV+ R L
Sbjct: 1 MLTVYNTMTRKKEEFHPLKEGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLARKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A +E + I+ + + L P
Sbjct: 60 -RVRYIQNFTDVDDKIINAANREGVT------WKEISDRYIAAYFTAMDALNVHRADVFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + + +I ++ +I G+AY + ++ + +YG S R +D+ + G R+
Sbjct: 113 RVSETMEDIIRMVGTLIARGYAYATSEGDVYYSVEKFAHYGRLSGRSLDDMEAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS YLG+ FD HGGG DLIF
Sbjct: 173 ETKRHPMDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232
Query: 243 PHHENEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQ C D EK A W+HNGF+ ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQAEPCIDGHEKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+P VIR +L THYR P+DF+ +RL+EA+ L++ T +
Sbjct: 286 FPGEVIRFFILQTHYRSPLDFSDERLSEAQAALARLSHTKEVIDELSGCEGTADTAAVLA 345
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------IFN 386
+A+ +D NT A+ + L++E + L +
Sbjct: 346 VQAKEFLAAFDAAMDDDFNTALALSQMFGLSKEINRYRQELERGAAFDAAHFAEAASAYR 405
Query: 387 ASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I+GI + + ++ ++ R K ++ AD IR +L+ G +LED
Sbjct: 406 TMAEIIGIFEQETAAASDGLADGLMDIIIGLRQDARVQKNWALADRIRNELKEHGVVLED 465
Query: 445 YKNPDNGQRMTRWKQ 459
RWK+
Sbjct: 466 TPT------GVRWKR 474
>gi|118595239|ref|ZP_01552586.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118441017|gb|EAV47644.1| cysteinyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 456
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 186/478 (38%), Positives = 262/478 (54%), Gaps = 43/478 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++N+L +K F++I P ++MYVCG TVYDF H+G+AR +IVFD++YR + E
Sbjct: 1 MIKLFNSLSKKKEIFKSIVPGQVKMYVCGMTVYDFCHLGHARVLIVFDLIYRWFKASGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA ++ + + +T + + D L ++P +P
Sbjct: 61 --VTYVRNITDIDDKIITRAAEQGVTYGV------LTKQFIDEMNADAEALGVISPDAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT I MI +IQ +I G+AY +NN++ + S YG S + +++ + G RV
Sbjct: 113 KATESIDAMIIMIQGLIEKGYAYVGSNNDVFYAVSKFNGYGKLSGKSLEDLRAGNRVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKN DF+LWK + P EP W SPWG+GRPGWHIECSAMS+ +LGK FDIHGGG DL F
Sbjct: 173 KFKKNSFDFVLWKSAKPGEPCWNSPWGKGRPGWHIECSAMSNKFLGKNFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + + AN W+HNGF+ ++ KMSKS GNF TI E+L +
Sbjct: 233 PHHENEIAQSEAFNGCQ-MANYWLHNGFVKVDNEKMSKSLGNFFTIREIL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
++R +L YR P++++ L +A+ L++ +
Sbjct: 285 EPEIVRFFVLKAQYRSPLNYSDTHLEDAKQGLTRLYLAIRGNDTRIDQEIDWKNNFASQF 344
Query: 356 ----YNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEHL-------N 402
+D NT AI L LA E K++ + A+ILGI L +
Sbjct: 345 KDALDDDFNTSEAISILFSLANEVNKSNQDQEKQLLIQLANILGILEMDPELFLRGNIKS 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I I+ L+ +RL K K + AD IR LE +LED N T W++K
Sbjct: 405 SDNDIDIDLLISDRLSAKKNKDYQKADEIRIFLEGHDILLEDTPN------GTIWRKK 456
>gi|300311195|ref|YP_003775287.1| cysteinyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300073980|gb|ADJ63379.1| cysteinyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 463
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 187/483 (38%), Positives = 256/483 (53%), Gaps = 46/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++KIYNTL R F I+P +R+YVCG TVYD+ HIG+AR ++VFD++ R LR
Sbjct: 1 MSELKIYNTLARDKQTFSPIEPGKVRLYVCGMTVYDYCHIGHARVLVVFDMVQRWLRASG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VTYVRNITDIDDKII+RA + + I+ +T++ +D L P H
Sbjct: 61 YE--VTYVRNITDIDDKIIKRAVENG------ETIAQLTNRFIDAMNEDAAALGVQRPDH 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT ++PQM+ LI + +G AY+ ++ ++ + P YG S + +D+ + G RV
Sbjct: 113 EPRATQYVPQMLDLIGKLEKNGLAYKASDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMSS LG FDIHGGG
Sbjct: 173 VNTGKRDPLDFVLWKAAKPAEPDEAKWDSPWGCGRPGWHIECSAMSSDLLGDHFDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 QDLQFPHHENEIAQSEGAH-QHTFVNYWMHNGFVRIDNEKMSKSLGNFFTIRDVL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGII 347
+ + V+R +L HYR P++++ L +A L++
Sbjct: 287 --KKYDPEVLRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALKDVPPQAGGLVADEAH 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKE------ 399
+ AL +D NT AI L +LA E ++ A A ILG+ +
Sbjct: 345 AVRLADALNDDFNTPVAIAVLFELANEVNRSRSPVQARQLKALAGILGLLQREPGEYLKG 404
Query: 400 ---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
IE L+ R K F+ AD IR +L G ILED T
Sbjct: 405 GVAAAEGLGEAEIEALIAARKAAKAGKNFAEADRIRAELTEAGIILEDKPGGL-----TE 459
Query: 457 WKQ 459
W++
Sbjct: 460 WRR 462
>gi|294338858|emb|CAZ87192.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Thiomonas sp. 3As]
Length = 460
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 188/476 (39%), Positives = 265/476 (55%), Gaps = 43/476 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++NTL R F I+P ++RMYVCG TVYD+ HIG+AR M+VFD+L R L+
Sbjct: 4 LHLHNTLTRGKDRFVPIEPGHVRMYVCGMTVYDYCHIGHARVMVVFDLLQRWLKAQG--L 61
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKII RA+ + I +T + +D L PTH+PR
Sbjct: 62 RVTYVRNITDIDDKIIRRAQDNG------ETIRALTDRFIAAMHEDADALGVERPTHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+++PQM+ LI + G AY + ++ F + P YG S + +DE + G RV
Sbjct: 116 ATDYVPQMLDLIGKLKTRGLAYRDSAGDVNFHVRAFPGYGKLSGKSLDELRAGERVEVDT 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP W S G GRPGWHIECSAMS LG+ FDIHGGG DL
Sbjct: 176 AKQDPLDFVLWKAAKPAEPEEVKWPSDDGPGRPGWHIECSAMSCALLGETFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A + AN+W+HNGF+ ++G KMSKS GNF TI ++L +
Sbjct: 236 QFPHHENEIAQSEGASG-KPMANVWLHNGFVRVDGEKMSKSLGNFFTIRDIL-------Q 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PA 350
A +RL ++ HYR P++++ + L +A L++ + A
Sbjct: 288 HVDAETVRLFIVRAHYRSPLNYSDEHLQDAHAALTRLYTALDPFAELPARLDWSHPRAQA 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI------EVCKEHLN 402
+A+ +DLNT A+ L +LA E K + DL + +LG+ E +
Sbjct: 348 FAAAMNDDLNTPEAMAVLFELATEVNKTGDADLAALLKGLGGVLGLLQQNPREFLQSKAA 407
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +E+LVQ R+ + + F+ AD IR +L +KG +LED +T W+
Sbjct: 408 AVDAAWVEQLVQARIAAKQARNFAEADRIRAELSAKGIVLEDKPGG-----ITVWR 458
>gi|170079458|ref|YP_001736096.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|229558794|sp|B1XND1|SYC_SYNP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169887127|gb|ACB00841.1| cysteinyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 472
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 238/493 (48%), Gaps = 56/493 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ ++ + +RMY CG TVYD+ H+G+AR +++DV+ R L++
Sbjct: 1 MSLSLYNTLHRRSEPFEPLEANLVRMYCCGITVYDYCHLGHARTCLIWDVVRRYLQWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI+ RAR E S + I K + + +D L
Sbjct: 61 E--VHYIQNFTDIDDKILNRARAEKSS------MGAIAEKFIEAYFEDMEALHIQPADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LI ++ G AY + ++ + YG S RK+D+ + G
Sbjct: 113 PRATHSLDGIQKLIHDLEQRGFAYASQGDVYYAVRKFDGYGKLSGRKLDDMQAGASGRVN 172
Query: 183 YHK-----KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+P DF LWK + EP W+SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 EDPDAPKKHDPFDFALWKAAKAGEPAWDSPWGAGRPGWHIECSAMVRDRLGETIDIHVGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENEIAQS A + A W+HNG + +EG KMSKS GNFITI ELL
Sbjct: 233 SDLIFPHHENEIAQSEAATG-QPLAKYWLHNGMVKVEGEKMSKSLGNFITIRELL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ + +RL +L HY +P+DFT + LT A
Sbjct: 287 --KKYDPMAVRLFILQAHYTKPLDFTDEALTAATKGWETLNDALLFGAEHLDTNNITADK 344
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------------IFNAS 388
I + + NDLN + L +LA+E K ++L
Sbjct: 345 GILAKFKAIVDNDLNFSGGLAILFELAKELKKEKNILVHEGKLQQNPQILASLWLTLKEL 404
Query: 389 AHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A ILG K+ IE L+Q+R K ++ D +R L KG +L D
Sbjct: 405 ADILGFVPETKQQAAGLTDAEIEDLIQQRKDARANKNYAEGDRLRDLLAEKGIVLVDKPG 464
Query: 448 PDNGQRMTRWKQK 460
+T W ++
Sbjct: 465 G-----ITEWHRE 472
>gi|83592028|ref|YP_425780.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
gi|109894932|sp|Q2RWK2|SYC_RHORT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|83574942|gb|ABC21493.1| cysteinyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
Length = 459
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 199/480 (41%), Positives = 265/480 (55%), Gaps = 45/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ I+NT+ R F+ +DP ++R+YVCGPTVYD AHIGNARP+IVFD+L
Sbjct: 1 MTLHIHNTMTRTKEVFEPLDPGHVRLYVCGPTVYDRAHIGNARPVIVFDLLA--RLLRRL 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITD+DDKI RA I IT + T+ F +D L L P +
Sbjct: 59 YPQVTYVRNITDVDDKINARASASG------RTIGEITEETTRLFHEDMAELGALPPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI M+ +I+ +I GHAYEA ++F S+ YGS S R +D+ G RV
Sbjct: 113 PRATAHIADMVAMIERLIAKGHAYEAEGHVLFSVPSMGAYGSLSGRSMDDMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK S PGW+SPWGRGRPGWHIECSAMSS YLG FDIHGGGLDLIF
Sbjct: 173 PYKRDPADFVLWKPSDASLPGWDSPWGRGRPGWHIECSAMSSRYLGPSFDIHGGGLDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + A W+HNG+L +EG KMSKS GNF+T+ +LL+
Sbjct: 233 PHHENEIAQSVCCNGPGTFARYWMHNGYLMVEGEKMSKSLGNFVTVRDLLDQA------- 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------GIIDPAVLSAL 355
P +RLAML THYR+P D+T + L +A L + + V++AL
Sbjct: 286 PGEAMRLAMLGTHYRQPFDWTAEGLEQARRGLDRLYSALRRVAGIAASPAEVPEGVMAAL 345
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHILGIEVCKE 399
+DLNT A+ ++ L + F A + +
Sbjct: 346 CDDLNTPKALAEVYDLLGVLNRATTTEEQAKAKGALLAAGALLGLFQADPEVW-LCGAGT 404
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ ++ +E L+ +R + + F+ AD IR +L G +LED N T W++
Sbjct: 405 GEEEGLAARVEDLICQRKAARQARDFARADAIRDELTQAGIVLEDGPN------GTTWRK 458
>gi|313891890|ref|ZP_07825492.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
gi|313119665|gb|EFR42855.1| cysteine--tRNA ligase [Dialister microaerophilus UPII 345-E]
Length = 481
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 169/502 (33%), Positives = 248/502 (49%), Gaps = 65/502 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +IK+YNTL+R+ + I+ +++YVCG T Y+ HIGNARP + +D++ R L Y
Sbjct: 1 ME-EIKVYNTLKREKQILKPIEEGKVKIYVCGVTPYNHPHIGNARPAVTWDIIRRYLEYI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +++N TD+DDKII +A E ++++ + K L
Sbjct: 60 GY--HVDFIQNFTDVDDKIINKANAEKSD------WKTVSTRYIDAYFKVMDALHIRRAD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
P + H+ +I +++ +I GHAY N++ +D S+ +Y S RK+++ G RV
Sbjct: 112 IYPYVSKHMGDIIDMVKTLIEKGHAYVLGNDVYYDISTFKDYCKLSGRKVEDMLAGARVM 171
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + P EP WESPWG GRPGWHIECS MS+HYLG FD HGGG DL
Sbjct: 172 VNTAKRNPGDFALWKGAKPGEPFWESPWGNGRPGWHIECSVMSTHYLGATFDFHGGGSDL 231
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS A +K W+HNGF+ + KMSKS NF + ++LE
Sbjct: 232 IFPHHENEIAQSEGATG-QKFVKYWLHNGFITINSEKMSKSLNNFFLVKDVLE------- 283
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
+ +R +L THYR P+DF+ +RL EAE +SK ++
Sbjct: 284 KYSGDALRYFLLSTHYRSPLDFSDERLEEAEKNMSKLKDVIARIKEMEKEDGKVETNESV 343
Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNH---------------DLLP 383
A+ +D NT A L ++ + +
Sbjct: 344 SLKKAAARTIEEFRQAMNDDFNTGLATGVLFDFVKDINIYYNAVNSGVAIDKEAVIEAKE 403
Query: 384 IFNASAHILGIEVCKEHLNK-----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
F ILGI + ++ + + +E ++ R I K K++ AD IR +L
Sbjct: 404 TFKTILDILGILENEWNIQESHAGSDYDALMEMILSVREIARKEKQYKLADEIRDKLAEL 463
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G +ED RWK++
Sbjct: 464 GITVEDSATGA------RWKKR 479
>gi|90415956|ref|ZP_01223889.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
gi|90332330|gb|EAS47527.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2207]
Length = 450
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 192/470 (40%), Positives = 258/470 (54%), Gaps = 42/470 (8%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ FQ ID + MYVCGPTVY+ HIGNARP +VFD LYRLL Y V Y R
Sbjct: 1 MTCSKQPFQPIDSQRVTMYVCGPTVYNRVHIGNARPAVVFDTLYRLLTSLY--PNVQYAR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
NITDIDDKI++ A + + + IS+++++ + + D L L PT P AT HIP
Sbjct: 59 NITDIDDKIMKTAAE------LGEDISVLSTRYAEAYFDDMQALNNLPPTIVPYATQHIP 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+M +I ++ HAYE+ ++F S+ +YG S R +D+ G RV +KK D
Sbjct: 113 EMTDMISRLVAKEHAYESEGHVLFAVQSMADYGKLSGRSLDDMLAGARVEVASYKKYAGD 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
FILWK S EPGW+SPWGRGRPGWH+ECSAM +LG+ DIHGGG DLIFPHHENEIA
Sbjct: 173 FILWKPSADDEPGWDSPWGRGRPGWHLECSAMIEKHLGESIDIHGGGQDLIFPHHENEIA 232
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QSCCA + AN+W+HNGF+N+EG KMSKS GNF +N+LLE +P V+R
Sbjct: 233 QSCCAHDGKPVANVWMHNGFINIEGEKMSKSLGNFRMVNDLLE-------QYPGEVLRYV 285
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLSALYNDLNTV 362
+L HYR +F L A L + I D +AL +DLNT
Sbjct: 286 ILSAHYRSEQNFGKDLLDSAWRSLDAIYGFLRTQVGIEAAAVDIADTHAYAALLDDLNTP 345
Query: 363 SAIQALHKLARESTKN-----HDLLPIFNASAHILGIEVCKEHL--------NKNISIAI 409
AI LHK ARE + A A ++G+ + + I
Sbjct: 346 VAISELHKFAREMNAADGDALAEAKGRLLAVAGLMGLLQQDPEQWFTHSRGGSDISAEEI 405
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
E L+ +R K ++ AD +R++L++ G +LED + T+W++
Sbjct: 406 EVLIAKRNQAKADKDYAGADGVREELKAMGVVLEDSR------EGTKWRR 449
>gi|332881450|ref|ZP_08449099.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332680448|gb|EGJ53396.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 494
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 161/500 (32%), Positives = 245/500 (49%), Gaps = 57/500 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ IYNTL RK EF+ + P + MYVCGPTVY AH+G+ARP I FD+L+R L++
Sbjct: 1 MEQKLFIYNTLSRKKEEFKPVTPGRVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLQHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + T +F
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVAQYYTNRFHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P AT HI + I L++ I+ +G+AY + + FD +YG S
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQIELVKEILDNGYAYVSEGSVYFDVEKYNKAHHYGKLSG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +++ +R + +K+ DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLEDVINNSRALDGVGEKHNQVDFALWKCAQPQHIMRWPSPWSNGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + + N W+HN + + G+KM KS GNF
Sbjct: 233 YLGDHFDIHGGGMDLIFPHHECEIAQAVASQGSD-MVNYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
IT+ + + +++ IR +L HYR +DF+ + L +E L++ +
Sbjct: 292 ITLAQFFSGEHESLTQAYSPMTIRFFILQAHYRSTVDFSNEALQASEKGLARLMEGIANL 351
Query: 340 -----------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHD 380
+ A+ +DLN+ I L R D
Sbjct: 352 KRITPTAGGSVEMAYVDELRRKCYEAMNDDLNSPIVISHLFDACRVINTVVDQKATMAGD 411
Query: 381 LLPIFNA-----SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIR 432
+L + ILG++ + ++ L+++R+I K ++++D IR
Sbjct: 412 VLAALTEVFHTFAFDILGLKEETGGGSGREEAFGKVVDMLLEQRMIAKANKDWATSDKIR 471
Query: 433 KQLESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 DNLAALGFEVKDTKDGFTWK 491
>gi|254252008|ref|ZP_04945326.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894617|gb|EAY68497.1| Cysteinyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 465
Score = 373 bits (957), Expect = e-101, Method: Composition-based stats.
Identities = 178/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRRSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIGAMHEDEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIEQLESNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPEDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT AI L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAARDGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|262376233|ref|ZP_06069463.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308834|gb|EEY89967.1| cysteinyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 473
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 268/488 (54%), Gaps = 57/488 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF I +YVCG TVYD+ HIG+AR ++ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRVEGQIDLYVCGMTVYDYCHIGHARTVVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITDIDDKII+RA + ++IS +TS+ +D +L CLAP P+AT
Sbjct: 64 KYVRNITDIDDKIIKRANENG------ESISELTSRFIDAMNEDFAKLGCLAPDVAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
++I QM +I N++ G AY N ++ F+ YG S RK+++ + RV +
Sbjct: 118 DYIDQMQAMIGNLVDKGTAYPSNNGDVYFEVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGADLTFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHAGFINVDGEKMSKSLGNFFTIRDVIE-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIIDPA 350
V+R ++ +HYR P++++ L EA+ LS++ + + +
Sbjct: 290 PEVVRYFIVSSHYRSPVNYSDVALKEAKNTLSRFYHSFKTYQAVYGDHLIETLDEALVER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPI----FNASAHILGI--EVCKE 399
+A+ +D NT AI L ++ +E + N + I +ILG+ + E
Sbjct: 350 FNAAMRDDFNTPEAIAVLFEINKELNRTVKEENAEQAAIYYATLRHLTNILGLVQQNVDE 409
Query: 400 HLNKNI--------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L +I IE L+Q+R K K+F+ AD IR+ L +G +LED +
Sbjct: 410 FLKSDIGQEALGLSPEQIEDLIQQRQDAKKAKEFARADEIRQSLLDQGVVLEDTR----- 464
Query: 452 QRMTRWKQ 459
+ T W++
Sbjct: 465 -QGTVWRR 471
>gi|229917379|ref|YP_002886025.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|259511833|sp|C4KZR7|SYC_EXISA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229468808|gb|ACQ70580.1| cysteinyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 465
Score = 372 bits (956), Expect = e-101, Method: Composition-based stats.
Identities = 173/488 (35%), Positives = 260/488 (53%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YN+L K F I P + MYVCGPTVY++ H+GNARP I FD + R L Y E
Sbjct: 1 MIQLYNSLTNKKEPFVPIVPGKVSMYVCGPTVYNYIHVGNARPAIAFDTVRRYLTYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII A + + + +T++ + ++ DT L P
Sbjct: 61 --VKYVLNFTDVDDKIIRTANE------LGEDTETLTNRYIEAYLADTGALNVQPADVHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T+ + ++I I+ + G AYE+ ++ F T YG S++ I++ + G+RV
Sbjct: 113 RVTDTMEEIIEFIRQLETEGFAYESEGDVYFRTKKFETYGKLSQQSIEDLRAGSRVDVGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P EP W+SPWG+GRPGWHIECSAM+ +LG DIH GG DL FP
Sbjct: 173 KKEDPLDFVLWKAAKPDEPSWDSPWGKGRPGWHIECSAMAKKHLGTTIDIHAGGHDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + + AN W+HNGF+N+E KMSKS GNF+ ++E L +
Sbjct: 233 HHENEIAQSEACNHAK-FANYWLHNGFINIENEKMSKSLGNFLLVHEAL-------KEVD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
V+R ML HYR PI+++ + + +A S+ + +
Sbjct: 285 PMVLRFFMLSVHYRHPINYSRELIEQAANGWSRIKEAYQNIEYRLSVTAGLGEASESMER 344
Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHI 391
I + + ++ +D+NT +A+ L LARE+ +L +F+ +
Sbjct: 345 KLESIKASFIESMDDDINTANAVTVLFDLAREANIYAKADHVAKATLEQVLSLFDELTGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+ + +E + + I++L+QER + F+ AD IR L+ + LED
Sbjct: 405 LGLTLAEEK--ELLDAEIDQLIQERNDARAARNFARADEIRDLLKEQNIQLEDT------ 456
Query: 452 QRMTRWKQ 459
+ RWK+
Sbjct: 457 AQGVRWKR 464
>gi|256852089|ref|ZP_05557476.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260661341|ref|ZP_05862254.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
gi|282934881|ref|ZP_06340113.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
gi|297205036|ref|ZP_06922432.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
gi|256615501|gb|EEU20691.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 27-2-CHN]
gi|260547796|gb|EEX23773.1| cysteinyl-tRNA synthetase [Lactobacillus jensenii 115-3-CHN]
gi|281301062|gb|EFA93374.1| cysteine--tRNA ligase [Lactobacillus jensenii 208-1]
gi|297149614|gb|EFH29911.1| cysteine--tRNA ligase [Lactobacillus jensenii JV-V16]
Length = 473
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 250/494 (50%), Gaps = 61/494 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L Y +
Sbjct: 1 MKIYNTLTRQKEEFKPLVPGKVSMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + + F++DTT L T PR
Sbjct: 60 -VKYVSNFTDVDDKMINEARAEGITVP------ELAKRYINAFMEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
AT I +I I+++I G AYE + ++ + YG S + I + G
Sbjct: 113 ATEEIKDIIAFIKDLIEKGFAYEVDGDVYYRAKKFNGYGKLSDQDIASLEEGASEHVNEA 172
Query: 184 ---HKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK+ E WESPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EFAKKEDPIDFALWKKQKQSDEIAWESPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKDEEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------- 344
+ V+R M YR+PI+++ + L +A I+L K T +
Sbjct: 287 --KRVDPQVLRFFMASVQYRKPINYSEENLKQAAIILDKIKNTVLNVQDKLQDTDSQENK 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ A+ +D N +A+ ++ L KN L
Sbjct: 345 ALAVAIEDSENRFKEAMDDDFNVQNALSVVYDLLPIINKNISESTSDLSNLKQFLQHLEN 404
Query: 388 SAHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+++ K K + IE+LV++R K K F+++D IR QL + +L+D
Sbjct: 405 WMAIFGVDIHKLTAEKVSDDDSEIEELVKKRDEARKHKDFATSDAIRDQLAAMNIVLQDT 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T+W++
Sbjct: 465 ------PKGTKWRR 472
>gi|260424802|ref|ZP_05733345.2| cysteine--tRNA ligase [Dialister invisus DSM 15470]
gi|260403249|gb|EEW96796.1| cysteine--tRNA ligase [Dialister invisus DSM 15470]
Length = 488
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 172/503 (34%), Positives = 249/503 (49%), Gaps = 65/503 (12%)
Query: 1 MKKK-IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
MK + IK+YNTL + T F+ + P +++YVCG T Y+ HIGNARP + +DV+ R L++
Sbjct: 6 MKMEEIKVYNTLTGEKTVFRPLVPGEVKIYVCGVTPYNHPHIGNARPAVTWDVICRYLKH 65
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
V +V+N TD+DDKII +A E I+ + + + +
Sbjct: 66 IGY--KVEFVQNFTDVDDKIINKANAEGSD------WKTISDRYIDAYFQVMDAMHVRRA 117
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR ++H+ +I ++Q +I GHAY N++ +D S+ +YG+ S RKID+ G R+
Sbjct: 118 DVYPRVSDHMQDIIDMVQGLIDKGHAYVLGNDVYYDISTFEHYGALSGRKIDDMLAGARI 177
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P EP WESPWG+GRPGWHIECSAMS HYLGK FD HGGG D
Sbjct: 178 EVNEGKRNPGDFALWKGAKPGEPFWESPWGKGRPGWHIECSAMSVHYLGKTFDFHGGGSD 237
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS + N W+HNGF+ + KMSKS NF ++L
Sbjct: 238 LIFPHHENEIAQSEGCTGCK-FVNYWLHNGFITINSEKMSKSLNNFFLAKDVL------- 289
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ + +R +L YR P+D++ RL EAE + + +
Sbjct: 290 KEYSGDALRYFLLSVQYRNPLDYSRDRLDEAEKNMERLSGVIRRLKELAAKEGAEKTDAS 349
Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
A A+ +D NT A A+ LA+ +
Sbjct: 350 RSLEKAAEESLKAFHEAMDDDFNTGLATGAMFDLAKAINIYGTAVDGGLSVDHEAVEKAY 409
Query: 384 -IFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
ILGI E +K+ + ++ ++ R K K + AD IR +L++
Sbjct: 410 TALKTIMDILGILEEVWEKTDSPDDKSYNDLMDIILAVRQTARKEKMYKIADEIRDRLDA 469
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G ++ED RWK++
Sbjct: 470 AGIVIEDTPTGA------RWKRR 486
>gi|58040207|ref|YP_192171.1| cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
gi|61216109|sp|Q5FQ31|SYC_GLUOX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|58002621|gb|AAW61515.1| Cysteinyl-tRNA synthetase [Gluconobacter oxydans 621H]
Length = 452
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 199/464 (42%), Positives = 267/464 (57%), Gaps = 30/464 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T R F +DP N+R+Y CGPTVYD AH+GN R M+ D+L RLLR Y
Sbjct: 9 LRLHDTHLRDKRPFTPLDPENVRVYFCGPTVYDRAHLGNLRAMMCADILIRLLRTMY--P 66
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TD+DDKI RA++ + IS +T + TQ F +D L L P +PR
Sbjct: 67 RVTYVRNVTDVDDKINARAKENG------EDISALTERTTQAFHEDLASLFILPPDIEPR 120
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+HI M+ +I ++ +GHAY A ++F + P+YG S R +D+ G RV +
Sbjct: 121 ATHHIDDMLEMIGRLVENGHAYVAEGHVLFAVRNFPSYGELSGRSLDDMIAGARVEVAPY 180
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK S P PGW+SP+GRGRPGWHIECSAMS YLG+ FDIHGGG DL+FPH
Sbjct: 181 KRDPGDFVLWKPSEPDLPGWDSPYGRGRPGWHIECSAMSHRYLGESFDIHGGGDDLLFPH 240
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQS C K A W+HNG L G KMSKS GNF TI E+L+ PA
Sbjct: 241 HENERAQSMCCYPHGKFATHWVHNGMLLSNGEKMSKSLGNFFTIREVLDRS-------PA 293
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYNDL 359
+RL L HYR +DF+ ++L EA +L + + + AV+ AL +DL
Sbjct: 294 EPLRLLYLGAHYRSTLDFSWEKLEEARRVLDRLYRALERGNAQPGTALPAAVMDALCDDL 353
Query: 360 NTVSAIQALHKLARESTKNHDLLP----IFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
NT AI ALH LA + + + + + + + AIEKL++E
Sbjct: 354 NTPLAIAALHPLADAAMQGDQDAASSLLAAGKLLGLFNVTPAEWFQSGVDASAIEKLIEE 413
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
RL K + F+ AD IR QL + G LED G T W++
Sbjct: 414 RLAARKSRDFARADAIRAQLAADGITLED------GPGGTTWRK 451
>gi|197286005|ref|YP_002151877.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227356519|ref|ZP_03840906.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
gi|229470558|sp|B4F1M6|SYC_PROMH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|194683492|emb|CAR44297.1| cysteinyl-tRNA synthetase [Proteus mirabilis HI4320]
gi|227163275|gb|EEI48202.1| cysteinyl-tRNA synthetase [Proteus mirabilis ATCC 29906]
Length = 463
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 177/495 (35%), Positives = 251/495 (50%), Gaps = 73/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I I MYVCG T+YD HIG+ R + FD + R LRY +
Sbjct: 1 MLKIFNTLTRQKEEFKPIHKGKIGMYVCGITIYDLCHIGHGRTFVAFDAITRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN+TD+DDKII+RA + N+ +T++ + KD L L P +P
Sbjct: 61 --VNYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIALTETLIKRGHAYVAENGDVMFAIDTDPDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 NVKRNPMDFVLWKMSKPGEPSWTSPWGEGRPGWHIECSAMNGKELGHHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMVDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR +++T + L +A L + + + +
Sbjct: 285 DAETVRYFLLSGHYRSQLNYTEENLKQARTALERLYTSLRGTDANAQPAGGEAFEAQFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L LARE + + L + A +LG+ +
Sbjct: 345 AMNDDFNTPEAYSVLFDLAREVNRLKTVNMEAANGLAAVLRKLAKVLGLLEQQPEHFLQS 404
Query: 401 ----LNKNISIAIEKLVQERLILLKMK------------KFSSADYIRKQLESKGFILED 444
+ + IE L+Q+R K K + G +LED
Sbjct: 405 GAQADDADEVEKIEALIQQRNDARKNKDWAAADAARDAL------------TAMGIVLED 452
Query: 445 YKNPDNGQRMTRWKQ 459
G + T W++
Sbjct: 453 ------GPQGTTWRR 461
>gi|288818363|ref|YP_003432711.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787763|dbj|BAI69510.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751956|gb|ADO45439.1| cysteinyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 172/511 (33%), Positives = 249/511 (48%), Gaps = 76/511 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL K+ EF ++P + +Y CG TVYD +H+G+ R +IVFDV R L +
Sbjct: 1 MSLKIYNTLSGKVEEFVPLNPPKVYIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA++E N I ++ + D + +
Sbjct: 61 --KVKFVRNFTDVDDKIINRAKEE------NTDFMTIANRYIASYYIDMESIKVKPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ ++I +I+ ++ G+AYE+ ++ F + P YG S+R +E ++G RV
Sbjct: 113 PRVTEHLQEIIDVIKGLVEKGYAYESGGDVYFSVKAFPEYGKLSKRSTEELEVGARVEPS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + EP WESPWG GRPGWH EC AM +LGK DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKSAKAGEPAWESPWGLGRPGWHTECVAMVFKHLGKTIDIHGGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HNG + + G+KMSKS GN++T+ E+ R +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLREV-------YRRY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+RL +L THYR P+DF+ +++ EA+ +
Sbjct: 285 HPDVLRLLVLFTHYRSPLDFSWEKMEEAKRAYERIRHAIEDLDMLKNLQVVEENKISQLY 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------------- 382
+ A L D NT SA+ + L E K
Sbjct: 345 EKVKEAEEAFFEDLSEDFNTPSALSHIFALVGELGKVKSRAISERRISRQDLSAYEFAVS 404
Query: 383 PIFNASAHILGI-------EVCKEHLNKNISI-------AIEKLVQERLILLKMKKFSSA 428
I I G+ + +E + + + I+ LV R K F A
Sbjct: 405 SILRHMRGIFGLFEDIYPEKPVREVVRRELEAGQVLDERLIDILVDVRNQARAEKVFKIA 464
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
DYIR +L+ G +LED T+W++
Sbjct: 465 DYIRDRLKEVGIVLEDT------PAGTKWRK 489
>gi|163755873|ref|ZP_02162990.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
gi|161324044|gb|EDP95376.1| cysteinyl-tRNA synthetase [Kordia algicida OT-1]
Length = 494
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 159/497 (31%), Positives = 235/497 (47%), Gaps = 54/497 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++KIYN+L + F I+ ++ MYVCGPTVY H+GN R + FD+++R L +
Sbjct: 6 EQELKIYNSLTNQKEVFTPINEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLNHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ +DKI ++AR E I + T F
Sbjct: 66 Y--KVRYVRNITDVGHLENDAEEGEDKIAKKARLEELE------PMEIVQRYTIDFHDIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
+ + P+ +P AT HI + I +++ II +G+ YE N + FD S R
Sbjct: 118 QKFNFIPPSIEPTATGHIIEQIEIVKEIIANGYGYEVNGSVYFDVHKFNEKNKYGILSNR 177
Query: 169 KIDE-QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+D+ + + KKNP DF LWK++ W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 NLDDLVNNSRELDGQSDKKNPQDFALWKKAEETHIMHWPSPWGEGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE+EIAQ+ N W+H L L G+KMSKS N I
Sbjct: 238 LGQKFDIHGGGMDLKFPHHESEIAQNEACCGTSP-VNYWMHANMLTLNGKKMSKSTDNNI 296
Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+ + + + V R M+ HYR +DF+ L +E +K + T+
Sbjct: 297 LPGEIFSGESTHLSKGFAPSVARFFMMQAHYRSILDFSNNALLASEKGYNKLMEAMTTLE 356
Query: 346 IIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P +AL +D NT I L + + + D A
Sbjct: 357 NLKPIGDKTSFNLSVWKRNCYNALNDDFNTPILIADLFEAVKFINQLKDGKATILAESLA 416
Query: 388 ---------SAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
ILG+E + +S +E L+ R K F+++D IR +L
Sbjct: 417 ELKKCMHAFVFEILGLEQPNASSDDGDALSGVVELLINMRTEARANKDFATSDKIRDELL 476
Query: 437 SKGFILEDYKNPDNGQR 453
+ G L+D K+ + R
Sbjct: 477 ALGIQLKDGKDGTSFSR 493
>gi|30316152|sp|Q8DHW6|SYC_THEEB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 486
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 164/503 (32%), Positives = 244/503 (48%), Gaps = 64/503 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F + P + +Y CG TVYD+ H+G+AR + +DVL R L +
Sbjct: 1 MPLHLYNTLSRRLEPFSPLHPERVTIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDKI+ RA + + ++ ++ + + +D L L +
Sbjct: 61 --TVHYVQNFTDIDDKILRRAYENG------ETMATVSDRYIAAYHQDMAALNILPASAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT IP++I LIQ ++ G+AY A ++ + + P+YG S R++++ G +
Sbjct: 113 PRATEVIPEIINLIQGLLDRGYAYVAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIE 172
Query: 183 Y----HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P DF LWK + P E WE+PWG+GRPGWHIECSAM G DIH
Sbjct: 173 EEEEQRKRHPLDFALWKAAKPEEMSVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG+DLIFPHHENEIAQS + A W+HNGF+ + KMSKS GNF TI +LL
Sbjct: 233 CGGMDLIFPHHENEIAQSEAVT-QQPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLLA- 290
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------ 348
+ +RL +L YR+P+DFT + LT A + I
Sbjct: 291 -----QGLDPMALRLLVLQAQYRKPLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDA 345
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------- 382
A A+ DLNT +A+ + +LA+ +
Sbjct: 346 AEVRSHPKTEAFCQAMDEDLNTAAALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDW 405
Query: 383 PIFNASAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
A +LG+E +E + I+ L+ R + K ++ +D +R L ++
Sbjct: 406 HTLVTLAQVLGLEAKEESNPALTVELTDEEIQALIAARTAARQAKNYTESDRLRDLLLAQ 465
Query: 439 GFILEDYKNPDNGQRMTRWKQKP 461
G L D K+ T W + P
Sbjct: 466 GVKLVDQKDGT-----THWFRVP 483
>gi|289548117|ref|YP_003473105.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181734|gb|ADC88978.1| cysteinyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 490
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 171/511 (33%), Positives = 245/511 (47%), Gaps = 76/511 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL ++ EF ++P + +Y CG TVYD +H+G+ R +IVFDVL R L Y
Sbjct: 1 MSLRLYNTLTGRVEEFVPLNPPQVLIYTCGVTVYDDSHVGHGRSLIVFDVLRRYLEYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII +AR+E + ++ + +D + +
Sbjct: 61 --RVKFVRNFTDVDDKIINKAREECT------HFMTVANRYIASYYRDMEAIGVRPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI ++I LIQ +I G+AY + ++ F + P YG SRR +E + G RV
Sbjct: 113 PRVTEHIQEIIQLIQGLIDKGYAYVSGGDVYFSVKAFPEYGKLSRRNPEELEAGARVEPS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + EP W+SPWG GRPGWH EC AM +LG DIHGGGLDL+F
Sbjct: 173 EKKRDPLDFALWKAAKAGEPAWDSPWGPGRPGWHTECVAMIFKHLGTTIDIHGGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A W+HNG + + G+KMSKS GN++T+ E+ +
Sbjct: 233 PHHENEIAQAEALTGR-PFARYWVHNGLVTVGGQKMSKSLGNYVTLREVYSR-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
V+RL +LMTHYR P+DF+ ++ E + + T
Sbjct: 285 HPDVLRLLVLMTHYRSPLDFSWDKMEETKRSYERLKNAITDAELLKELPSEEVREKHPLL 344
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------------- 382
+ + L +D NT SA+ L L E K +
Sbjct: 345 DKIRDAEEKFFADLADDFNTPSALGRLFTLVSEMGKLKKEVLERRRVKTSELDAYQQASE 404
Query: 383 PIFNASAHILGI--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
+ I G+ E E + IE L++ R + K ++ A
Sbjct: 405 TLLKHLRGIFGLFEDLYPVCSVRRVVEKEMEAGHVLDERLIELLIEVRSKARQEKAYAIA 464
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L G ILED T+WK+
Sbjct: 465 DLIRDRLRELGIILEDT------PAGTKWKR 489
>gi|238893488|ref|YP_002918222.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae NTUH-K2044]
gi|238545804|dbj|BAH62155.1| cysteinyl-tRNA synthetase [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 461
Score = 372 bits (955), Expect = e-101, Method: Composition-based stats.
Identities = 176/494 (35%), Positives = 249/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q RL + +L G +LED
Sbjct: 405 GAQVDDAEVAEIESLIQRRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|15673833|ref|NP_268008.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|24418700|sp|Q9CEJ0|SYC_LACLA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|12724882|gb|AAK05949.1|AE006415_4 cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|326407342|gb|ADZ64413.1| cysteinyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
Length = 448
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 160/466 (34%), Positives = 241/466 (51%), Gaps = 36/466 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT R++ +FQ I+P ++MYVCGPTVY++ H+GNAR ++ FD++ + L + E
Sbjct: 1 MKIYNTYSRQLEDFQPIEPGKVKMYVCGPTVYNYIHVGNARSVVAFDLVRKYLEFRGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDKII A+ N + + + F +DT L + P+
Sbjct: 60 -VQYISNFTDVDDKIINGAKA------ANMTTTDFSERYIAAFYEDTDALNVKRASQNPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I MI IQ ++ AY + ++ F S +Y + + + + G
Sbjct: 113 ATEFIEAMIEFIQELVDKEFAYVSQGDVYFRVSKSKDYAKLANKNLADLLAGASGRTDEE 172
Query: 185 KKNPA---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K DF LWK + E W++PWG GRPGWHIECS MS+ LG+ DIHGGG DL
Sbjct: 173 TKLKESPADFALWKSAKADEVSWQAPWGAGRPGWHIECSVMSTSLLGETIDIHGGGADLE 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHH NEIAQS +K N W+HNGF+N++G KMSKS GNF T++ELL +
Sbjct: 233 FPHHTNEIAQSEAKTG-QKFVNYWMHNGFVNVDGEKMSKSLGNFTTVHELL-------QV 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPA 350
++R + THYR P++FT LTEAE + K
Sbjct: 285 VNPQILRFFLATTHYRRPVNFTDDALTEAENNIKKIENAYRHLDEQAESNLSALTTFRND 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
++A+ D N + + + K + ++ F+ ILGI+ E ++
Sbjct: 345 FVAAMDEDFNIANGMTVFYDFVSWVNKGNGGPEVKEFFDQVLEILGIKFKFEQ---SLDS 401
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE +++ R + +++ F+ +D IR L+++G +LED K+ R
Sbjct: 402 EIEAMIEARQLAREVRDFAKSDEIRDALKAQGIVLEDTKDGVRWHR 447
>gi|227510715|ref|ZP_03940764.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
gi|227189836|gb|EEI69903.1| cysteinyl-tRNA synthetase [Lactobacillus brevis subsp. gravesensis
ATCC 27305]
Length = 468
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 174/493 (35%), Positives = 253/493 (51%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL RK +F+ + P + MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 1 MLQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I AR+ H ++ I K F++DT L P
Sbjct: 60 -KVNYVSNFTDVDDKMINAARENHTTVG------AIAEKYINAFMQDTAALNISKDVTHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
RAT +IP++I ++N+ G+AY + + F P YG +D+ ++G +
Sbjct: 113 RATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEK 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK+S E W+SPWG+GRPGWHIECS MS YLGK DIHGGG D
Sbjct: 173 GEFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
LIFPHHENE AQS + W+HNGF+ + + KMSKS GNFIT+++LL
Sbjct: 233 LIFPHHENERAQSEAETH-QTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ VIRL M THYR PI ++ + EA+ L K +
Sbjct: 287 --KKIDGQVIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDP 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
I + A+ +D N + I A+++LA+ + + ++
Sbjct: 345 KTEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFANMYSERDVVFQNSLQFIINTLKQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A + GI++ + L I L+ ER K F +D IR++L+++G +LED
Sbjct: 405 LAAVFGIKLEQSELK---DDEIWALIHERQQARANKDFIRSDEIREELKARGIVLEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TR++++
Sbjct: 460 ----PQGTRFRKE 468
>gi|256848164|ref|ZP_05553608.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
gi|256715224|gb|EEU30201.1| cysteinyl-tRNA synthetase [Lactobacillus coleohominis 101-4-CHN]
Length = 469
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 163/493 (33%), Positives = 255/493 (51%), Gaps = 60/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R EF + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 1 MLKIYNTLTRTKEEFHPVHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ AR++ ++P + K + F++DTT + T P
Sbjct: 60 -HVNYVSNFTDVDDKMIKAAREQEITVP------ELADKYIRAFLEDTTAVNIEPATMHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT++IP++I IQ +I G+AY + ++ + +YG S + ID+ ++G
Sbjct: 113 RATDNIPEIIKFIQRLIQRGYAYAVDGDVYYRARKFKHYGQLSGQSIDDLEVGASEHVSA 172
Query: 184 HKKN----PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N P DF LWK + P E W+SPWG GRPGWHIECS MS+ YL DIH GG D
Sbjct: 173 DEVNKKADPMDFALWKAAKPGEISWDSPWGAGRPGWHIECSVMSTKYLADTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS A +K N W+HNGF+ + + KMSKS NF+T+++++
Sbjct: 233 LEFPHHENEIAQSEAATG-KKFVNYWMHNGFVTIGKDNEKMSKSLHNFVTVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R M T YR PI ++ L +A+ L+ +
Sbjct: 287 --KHVDPQVLRFFMATTQYRRPIQYSEDNLVDAQNNLAHIQTAFNNLEYRKNDATDGDDT 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ + A+ +D+N + I +++L + + + + + +
Sbjct: 345 TVANQLATFRSSFIEAMDDDINVQNGIAVVYELVKFANRYTEKETVAKDAIGNIQKLLKE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + I++L+ +R + K F+ +D IR L+++G I+ED
Sbjct: 405 LLLIFGVKLT--ATGQIDDETIKQLIAKRDEARRQKNFALSDQIRDDLKAQGIIIEDT-- 460
Query: 448 PDNGQRMTRWKQK 460
+ TR++++
Sbjct: 461 ----PQGTRYRKE 469
>gi|220910551|ref|YP_002485862.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|254781541|sp|B8HQA4|SYC_CYAP4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219867162|gb|ACL47501.1| cysteinyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 494
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 183/513 (35%), Positives = 268/513 (52%), Gaps = 76/513 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R F+ ++P +++MY CG TVYD+ H+G+AR IV+DV+ R L++
Sbjct: 1 MPLSLYNTLTRHQEPFEPLEPGHVKMYCCGVTVYDYCHLGHARSYIVWDVVRRYLQWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N TDIDDKI+ RARQE N + ++ + Q + +D RL L
Sbjct: 61 Q--VRYVQNFTDIDDKILNRARQE------NSTMQAVSDRFIQAYHEDMQRLNILLADVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRV 179
P+AT+ IP++I LIQ ++ G+AY + ++ + P+YG S R++++ + G
Sbjct: 113 PKATDVIPEIIQLIQTLVDQGYAYAVDGDVYYAVDRFPDYGKLSGRQLEQMQAGASGRVD 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + E W+SPWG+GRPGWHIECSAM LG DIH
Sbjct: 173 DTEPKKRHPLDFALWKAAKSEELSVYQPWDSPWGKGRPGWHIECSAMVRKELGHTIDIHC 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DLIFPHHENEIAQS A R + A+ W+HNGF+N++G KMSKS GNF TI L +
Sbjct: 233 GGMDLIFPHHENEIAQSEAATRAD-LAHYWLHNGFVNIQGEKMSKSLGNFKTIRAFLNS- 290
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------KWPQ 339
++RL +L HYR+PIDF+ + +T A+ +W
Sbjct: 291 -----GVDPMMLRLFVLQAHYRKPIDFSDETITAAQHSWQTLQEGLRFGYDYGQQLRWED 345
Query: 340 TS------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
G +A+ +DLNT SAI L +LA+E + +L+
Sbjct: 346 YQDSSFGDPACMRIPDSGAEIERFRAAMDDDLNTASAIAVLFELAKELRREGNLISHAGQ 405
Query: 384 -------------IFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLILLKMKKFS 426
A +LG+EV E + IE L+Q+R K K ++
Sbjct: 406 PQLDPQELRSIWQTLVCLAQVLGLEVSPETEVTADDGLSEAEIEDLIQQRQAARKAKNYA 465
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L++KG L D K+ T+W +
Sbjct: 466 EGDRIRNELKTKGITLIDQKDGS-----TKWIR 493
>gi|242050146|ref|XP_002462817.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
gi|241926194|gb|EER99338.1| hypothetical protein SORBIDRAFT_02g032450 [Sorghum bicolor]
Length = 571
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 189/508 (37%), Positives = 270/508 (53%), Gaps = 74/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YNT RK +F+ DP + MYVCG T YD +HIG+AR + FDVLYR LRY
Sbjct: 72 RELHLYNTKSRKKEQFRPRDPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYLD 131
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YVRN TDIDDKII RA Q + + ++ + + F+ D L CL P+
Sbjct: 132 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRFSDDFLSDMANLQCLPPSV 183
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PR ++HI ++I +I+ I+ + AY ++ F + P YG S RK+D+ + G RV
Sbjct: 184 EPRVSDHIHEIINMIKQILDNSCAYVVGGDVYFSVENFPEYGELSGRKLDDNRAGERVAV 243
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG FDIHGGG DLI
Sbjct: 244 DERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 303
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + T N WIHNGF+N+ +KMSKS GNF+TI +++E
Sbjct: 304 FPHHENEIAQSRAAC-CDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM------- 355
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ +R+ +L THYR PI++T+++L A L QT
Sbjct: 356 YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEESCQQQGSNTGNSLPP 415
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASA 389
+ +++ +DL+T A+ A+ + + K L +A
Sbjct: 416 NTLNYIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLEALSALD 475
Query: 390 H-------ILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
+LG+ E ++ +K + + + ++ER K K++ +D
Sbjct: 476 EKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVLQKIEERTAARKAKQYEKSDE 535
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IRK+L + G L D N T W+
Sbjct: 536 IRKELAAVGIALMDGPN------GTTWR 557
>gi|237738879|ref|ZP_04569360.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|229423982|gb|EEO39029.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
Length = 473
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 176/488 (36%), Positives = 266/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ I + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT ++ +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT++I MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ VIRL +L +HYR+P++F+ L + + L + +
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------ 387
K ++ + A+ D NT A+ + +L + K D + + +
Sbjct: 345 LATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEENFSKTAIEVLDEVYSYLV 404
Query: 388 --SAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E NIS IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|218895225|ref|YP_002443636.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
gi|226735046|sp|B7ISZ9|SYC_BACC2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218541053|gb|ACK93447.1| cysteinyl-tRNA synthetase [Bacillus cereus G9842]
Length = 465
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 172/489 (35%), Positives = 249/489 (50%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAH 390
A A+ +D NT +AI L+ +A + + +
Sbjct: 345 VEIEKFQTAFEEAMNDDFNTANAITELYNVANYANQYLLEEHTSKVVIEAYVKQLETLFD 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+E+ +E L + Q+R+ K + F+ +D IR L+ + ILED
Sbjct: 405 ILGLELTQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKGRNIILEDT----- 456
Query: 451 GQRMTRWKQ 459
+ TRWK+
Sbjct: 457 -AQGTRWKR 464
>gi|300769737|ref|ZP_07079619.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
gi|300492645|gb|EFK27831.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ATCC 14917]
Length = 506
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 167/482 (34%), Positives = 245/482 (50%), Gaps = 53/482 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++NTL R+ F+ I P ++MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 36 NMLSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY 95
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDK+I+RA ++H ++P + + + F++DTT + T
Sbjct: 96 --HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVH 147
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRA+ +IP++I +Q +I G+AYE+ ++ + YG S ++ID+ ++G
Sbjct: 148 PRASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTA 207
Query: 183 YHKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ + DF LWK + P E WESPWG GRPGWHIECS MS+ YLG FDIHGGG
Sbjct: 208 DEETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQ 267
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS + AN W+HNGF+ + + KMSKS GNF+T+++++
Sbjct: 268 DLEFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDII---- 322
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------- 342
++ V+R M T YR PI +T L EA L K
Sbjct: 323 ---KTVDPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTD 379
Query: 343 -----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFN 386
+ +A+ +D N + + A+++LA+ +
Sbjct: 380 TAVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQEALV 439
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ G+ + AI+ L+ ER K K F+ AD IR L+++G ILED
Sbjct: 440 QLTGVFGV-TFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILEDTP 498
Query: 447 NP 448
Sbjct: 499 QG 500
>gi|15675744|ref|NP_269918.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
gi|71911468|ref|YP_283018.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|21264023|sp|Q99XZ9|SYC_STRP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|13622964|gb|AAK34639.1| putative cysteinyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
gi|71854250|gb|AAZ52273.1| cysteinyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
Length = 447
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 159/466 (34%), Positives = 238/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + + +YVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDTMTRSLRKFVPLTENTVNIYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYTGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A Q S ++ + F++DT L T P
Sbjct: 61 --VNYISNFTDVDDKIIKAATQAGVS------PKELSDRFIAAFIEDTKALGVKPATQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++I ++I ++++I AYEA+ ++ F +Y + + + E ++G
Sbjct: 113 RVMDYIAEIISFVESLIEKDFAYEADGDVYFRVEKSEHYAKLANKTLSELEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKAGEVSWDSPWGFGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVTVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSA---- 354
V+R + YR+PI+FT + + +AEI L T D L
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKTIHDAEINLKYLKNTLQQPLTETADEQELKQFVIA 344
Query: 355 ----LYNDLNTVSAIQALHKLARESTKN---HDLLPIFNASAHILGIEVCKEHLNKNISI 407
+ +D NT + I + +A+ + F + GI +E + +
Sbjct: 345 FQDAMDDDFNTANGITVVFDMAKWINSGSYTEPVKSAFEKMLAVFGIIFEEE----VLEV 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F++AD IR QL +G L D K+ R
Sbjct: 401 DIEALIAKRQEARANRDFATADAIRDQLAVQGIKLLDTKDGVRWLR 446
>gi|282899565|ref|ZP_06307529.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
gi|281195444|gb|EFA70377.1| Cysteinyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
Length = 488
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 177/506 (34%), Positives = 252/506 (49%), Gaps = 69/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ EF+ ++P +RMY CG TVYD+ H+G+AR IV+DV+ R L +
Sbjct: 1 MTLSIYNTLTRRQEEFKPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDKI+ RAR+E N + + + Q + +D RL
Sbjct: 61 --RVRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LIQ++ + G+AY A+ ++ + YG S RK+ + + G
Sbjct: 113 PRATHTMNGIKRLIQDLEVRGYAYPADGDVYYAVRKFNEYGKLSGRKLADLQAGASERVN 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM LG DIH G
Sbjct: 173 IEDPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + AN W+HNG + ++G KMSKS GNF TI +LL+
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
R +RL +LM YR+P+DFT + + A Q
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGAKLDWDLQ 345
Query: 340 TSTSKGIIDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLL------------- 382
++ ID + +D N + + ++A+E K +++
Sbjct: 346 SAKDNTNIDQVEIEKFTTAVDDDFNFPGGLAVIFEIAKELRKEGNIIVHEGKTQTPCAKL 405
Query: 383 ----PIFNASAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+LG+ E IE LVQ+R K K F+ +D IR++
Sbjct: 406 LTKWQTLVTLTSVLGLIAKPEEQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREE 465
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
L++KG L D K TRW+++
Sbjct: 466 LKAKGITLIDSK------EGTRWQRE 485
>gi|298528309|ref|ZP_07015713.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298511961|gb|EFI35863.1| cysteinyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 485
Score = 372 bits (954), Expect = e-101, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 252/499 (50%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL R +F ++P +RMYVCG T YD+ HIG+AR +VFDVL R LRY
Sbjct: 1 MLIYNTLHRAKEKFVPLEPGKVRMYVCGITAYDYCHIGHARSCVVFDVLVRYLRYLGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V++VRN TD+DDKII+RA +E + K + F D L L +PR
Sbjct: 59 HVSFVRNFTDVDDKIIKRAEEEGLDS------DQVAEKYIEAFYLDMDELNVLKADVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +MI + ++++ G AY + +I F +P YG S R I+E + G+R+
Sbjct: 113 ATRHIEEMIQVTKSLLDKGFAYITSGKDIYFRVRRMPRYGQLSGRNIEELQSGSRIAPDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W+SPWG GRPGWH+EC+AMS YLG FDIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKTAKPGEPSWDSPWGAGRPGWHLECTAMSEKYLGIPFDIHGGGQDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS A E W+HNGF+ ++ KMSKS GNFITI +++ + +
Sbjct: 233 HHENEKAQSEAAFDRE-FVKYWVHNGFVRVDSEKMSKSLGNFITIRDIM-------KDFH 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------------WPQTS 341
V+R +L HYR P+D++ L E E L + +P+ S
Sbjct: 285 GEVLRFFLLTKHYRSPLDYSDGSLEETEKALKRVYWAKTGLQKELQKEKWSKGQGFPEAS 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
+ A+ +DLNT A+ + L R + + + +L +
Sbjct: 345 QELQDLASKWDQAMQDDLNTAEAVGYVFGLVRLANRMLEDKTFRKSEAGKEIIQQMLGML 404
Query: 386 NASAHILGI-----EVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
LG+ E E L ++++V +R K K F +AD IR+
Sbjct: 405 EGWGDALGVFQRSGEEFLEQLKLMRCNRLDIDPQTVQEMVLKRQQARKDKDFETADNIRE 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L +KG + D
Sbjct: 465 ELTAKGIEVMDTPEGPRWD 483
>gi|299782847|gb|ADJ40845.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus fermentum CECT 5716]
Length = 473
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 157/494 (31%), Positives = 247/494 (50%), Gaps = 60/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF + MYVCGPTVY++ HIGNAR ++ FD + R L + +
Sbjct: 1 MLKIYNTLTRQKEEFHPQQAGIVNMYVCGPTVYNYIHIGNARSVVAFDTVRRYLEFSGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A+++ ++P + K Q +++DT L T P
Sbjct: 61 --VNYVSNFTDVDDKMIKAAKEQGITVP------ELAYKYIQAYMEDTAALNVEPATTHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +I I+++I G+AY++ ++ + +YG S + +D+ ++G
Sbjct: 113 RATENIDGIISFIEDLIEKGYAYQSGGDVYYRARKFAHYGQLSGQSLDDLEVGASEHVST 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRG-RPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF LWK + P E W+SP G PGWHIECS MS+ YLG DIH GG
Sbjct: 173 EEVAKKXDPLDFALWKAAKPGEIKWDSPVGGPGAPGWHIECSVMSTKYLGDTLDIHAGGQ 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHHENEIAQS + N W+HNGF+ + + KMSKS GNF+T+++L+
Sbjct: 233 DLEFPHHENEIAQSEAKTG-HRFVNYWMHNGFVTIGRDNEKMSKSLGNFVTVHDLI---- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------------- 341
+ V+R M T YR PI ++ + L EA+ L T
Sbjct: 288 ---KEVDPQVLRFFMSTTQYRRPIQYSQESLVEAQANLEHLKNTYDNLAYRLKDATSGTD 344
Query: 342 ----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
++A+ +D+N + I +++L R + + + +
Sbjct: 345 GGVQRQLADFRARFVAAMDDDINVQNGIAVVYELMRFANQYVEQRLVQREPIVAIQLMLK 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ G+++ + I++L+++R K F+ +D IR QL +G ILED
Sbjct: 405 RLVAVFGVDLAV-SATEINDEKIKELIEKRNAARAEKDFALSDQIRDQLRDQGIILEDT- 462
Query: 447 NPDNGQRMTRWKQK 460
+ TR++++
Sbjct: 463 -----PQGTRYRKE 471
>gi|227513730|ref|ZP_03943779.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
gi|227522453|ref|ZP_03952502.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
gi|227083049|gb|EEI18361.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri ATCC 11577]
gi|227090405|gb|EEI25717.1| cysteinyl-tRNA synthetase [Lactobacillus hilgardii ATCC 8290]
Length = 468
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 176/493 (35%), Positives = 253/493 (51%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL RK +F+ + P + MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 1 MLQIFNTLTRKKEKFEPVTPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I AR+ H ++ I K F++DT L P
Sbjct: 60 -KVNYVSNFTDVDDKMINAARENHTTVG------AIAEKYINAFMQDTAALNISKDVTHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
RAT +IP++I ++N+ G+AY + + F P YG +D+ ++G +
Sbjct: 113 RATQNIPEIIAFVKNLEDQGYAYNVDGNVYFRARKFPTYGELPHINVDQLEVGASQHVEK 172
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK+S E W+SPWG+GRPGWHIECS MS YLGK DIHGGG D
Sbjct: 173 GEFEQKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSMKYLGKTLDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
LIFPHHENE AQS + W+HNGF+ + + KMSKS GNFIT+++LL
Sbjct: 233 LIFPHHENERAQSEAETH-QTFVKYWMHNGFVTIGEDNEKMSKSLGNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ VIRL M THYR PI ++ + EA+ L K +
Sbjct: 287 --KKIDGQVIRLLMSTTHYRRPIQYSDASVQEAKSNLKKLQTAFNNSTYRLHNAEAGSDP 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
I + A+ +D N + I A+++LA+ S + ++
Sbjct: 345 KTEQEVRQIVADFIDAMDDDFNVQNGIAAVYELAKFSNMYSERNVVFQNSLQFIINTLKQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A I GI++ + L I L+ ER K F +D IR++L+++G +LED
Sbjct: 405 LAAIFGIKLEQSELK---DDEIWALIHERQQARANKDFIRSDEIREELKARGIVLEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TR++++
Sbjct: 460 ----PQGTRFRKE 468
>gi|171058353|ref|YP_001790702.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
gi|170775798|gb|ACB33937.1| cysteinyl-tRNA synthetase [Leptothrix cholodnii SP-6]
Length = 457
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 179/476 (37%), Positives = 252/476 (52%), Gaps = 45/476 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+N+L R++ F++I+P ++RMYVCG T+YD HIG+AR M+ FDV+YR LR
Sbjct: 1 MRIHNSLSRELETFKSIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVYRWLRASGW-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKII RA + + I +T + +D L PTH+PR
Sbjct: 59 RVTYVRNITDIDDKIIRRAVERGIT------IRQLTDEMIDAMHRDIGALGIERPTHEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQM+ +I + G AY + N ++ + YG S + +D+ + G RV
Sbjct: 113 ATEYIPQMLSMISTLESKGLAYRSGNGDVNYAVRRFEGYGKLSGKSLDQLRAGERVAVAD 172
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP ++SP+G GRPGWHIECSAMS LG+ FDIHGGGLDL
Sbjct: 173 GKEDPLDFVLWKSAKPQEPDDAKYDSPYGPGRPGWHIECSAMSCALLGETFDIHGGGLDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A W+HNGFLN++ KMSKS GNF TI ++L +
Sbjct: 233 QFPHHENEIAQSEGALG-HSWVPTWMHNGFLNVDNEKMSKSLGNFFTIRDVL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------ 354
S+ +R ML YR P +F+ L +A L++ + D + +
Sbjct: 285 SYDGETVRFFMLRVQYRSPFNFSDAGLDDARSSLTRLYTALDGVAVDDASEIDWTHPAAA 344
Query: 355 -----LYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKE------HL 401
+ +D NT A+ L LA E +N D + +LG+
Sbjct: 345 RFKAAMDDDFNTPIAVSVLFDLAGEVNRNKDAGTAGLLKRLGAVLGVLQQSPRTFLQGDT 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
I++ + ER + F+ AD IR L ++G L+D + T W
Sbjct: 405 GGLDEAHIQQQIGERQAAKAARNFAEADRIRLALAAQGITLKDT------PQGTTW 454
>gi|332708902|ref|ZP_08428873.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
gi|332352444|gb|EGJ32013.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
Length = 494
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 169/513 (32%), Positives = 241/513 (46%), Gaps = 76/513 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ ++ +RMY CG TVYD H+G+AR IV+D L++
Sbjct: 1 MTLNLYNTLTRRKESFEPLETGKVRMYCCGITVYDLCHLGHARTCIVWDTARHYLQWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N TDIDDKI+ RAR+E S + ++ + + +D RL
Sbjct: 61 D--VNYVQNFTDIDDKILNRARREGTS------MEAVSERFIDAYFEDMARLNVQEANAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + L+ + G+AYEA+ ++ + YG S RK+++ + G
Sbjct: 113 PRATHSLDGIKRLVCELEQKGYAYEADGDVYYSVRRFEEYGKLSGRKLEDLQAGASGRVD 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF +WK + P EP WESPWG GRPGWHIECSAM LG+ DIH G
Sbjct: 173 VADSVGPKKKDPFDFAVWKSAKPEEPSWESPWGPGRPGWHIECSAMVRDMLGETIDIHTG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS + A W+HNG + ++G KMSKS GNF TI +LL+
Sbjct: 233 GSDLVFPHHENEIAQSEAVTG-KSLARYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------ 338
R +RL +LM YR+PIDFT + A
Sbjct: 289 ---RPVDPMAVRLFVLMAQYRKPIDFTDDAIASATNGWQTLKEGLLFGHNYGIQLGWQDQ 345
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------ 382
Q S I A+ +DLN + L ++A+ + ++L
Sbjct: 346 SATPKPSQPLQDDLSNKTIAQQFQEAVDDDLNFAGGLAVLFEVAKGLRREGNILVHQGKT 405
Query: 383 -----------PIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFS 426
A +LG+E E + IE L+Q+R K K F
Sbjct: 406 ETPASELEQQWRSLVELAEVLGLEAQPEEEAEVSTDGLSDGEIEALIQQRAEARKTKNFE 465
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+D IR L+++G L D +T W +
Sbjct: 466 LSDRIRDDLQAQGITLIDQGGG-----VTTWHR 493
>gi|331006994|ref|ZP_08330231.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
gi|330419182|gb|EGG93611.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC1989]
Length = 478
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 186/500 (37%), Positives = 260/500 (52%), Gaps = 64/500 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F ID IR+YVCG TVYD+ HIG+AR +I FDV+ R LR
Sbjct: 1 MALTIYNTLAREKVIFTPIDAGKIRLYVCGMTVYDYCHIGHARVLISFDVIVRFLRSQGW 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YVRNITD+DDKII RA + S I+ + +D L L P +
Sbjct: 61 D--VEYVRNITDVDDKIINRAEENGESSE------ILAQRFIDAMHEDERALNILPPNQE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ +I +++ +I +AY +NN++ + NYG S +K DE G RV
Sbjct: 113 PRATAHMDNIIAMVKTLINKNYAYVASNNDVYYRVGKFGNYGQLSGKKPDELMAGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPME---------PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++P DF LWK P WESPWG GRPGWHIECSAMS LG FD
Sbjct: 173 GDIKEDPRDFALWKAIDPSNVVGDGKNAPVSWESPWGAGRPGWHIECSAMSKSCLGNSFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG DL FPHHENEIAQS A+ + N W+H G + ++G KMSKS GNF TI ++L
Sbjct: 233 IHGGGPDLPFPHHENEIAQSEAANGCK-YVNYWLHAGAVRVDGEKMSKSLGNFFTIRDVL 291
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
+ + + VIR ++ +HYR I+++ L EA+ L ++ QT ++P
Sbjct: 292 -------KKYHSEVIRYLIVNSHYRSSINYSEDNLIEAKSGLDRFYQTLKHYTDVEPAAI 344
Query: 350 ----------AVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHI 391
+ ++ +D NT A+ +++L + K L+ A A+I
Sbjct: 345 ESLSDSVYYQHFVDSMNDDFNTRIALSGMYELIKTINTVAVDDAEKAKKLVAELKAMANI 404
Query: 392 LGIEVCK--EHLNKNIS---------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
LG+ E L IE L+ +R+ K K++ AD IR+QL+ +G
Sbjct: 405 LGVLQADPTEFLQAEDKTSQVVGLSIDVIETLISQRIQAKKDKQYQRADDIRQQLDDQGV 464
Query: 441 ILEDYKNPDNGQRMTRWKQK 460
+LED + T W++K
Sbjct: 465 LLEDSR------EGTAWRRK 478
>gi|189461692|ref|ZP_03010477.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
gi|189431579|gb|EDV00564.1| hypothetical protein BACCOP_02356 [Bacteroides coprocola DSM 17136]
Length = 492
Score = 371 bits (953), Expect = e-100, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 244/498 (48%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIQLVEGILKNGYAYESQGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQK-MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVINTTRELDGQQEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + W+HN + + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQSVASQG-HDMVRYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ A IR +L HYR +DF+ + L AE L + + +
Sbjct: 292 ITLDEFFTGSNKLLTQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLERMMEGVKNL 351
Query: 345 GIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--- 387
I P A+ +DLNT I L R D +A
Sbjct: 352 ERITPSKTTSGIEPAGLREKCYEAMNDDLNTPIVISHLFDAIRMINTVIDKKATISADDL 411
Query: 388 ----------SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQ 434
ILG++ E+ ++ L+++R+ K ++++D IR
Sbjct: 412 EELKSVFHTFVFDILGLKAEAENNAAREEAFGKVVDMLLEQRMQAKANKDWATSDKIRDT 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 LAALGFEVKDTKDGFTWK 489
>gi|304436605|ref|ZP_07396574.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
gi|304370301|gb|EFM23957.1| cysteine--tRNA ligase [Selenomonas sp. oral taxon 149 str. 67H29BP]
Length = 476
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 167/496 (33%), Positives = 243/496 (48%), Gaps = 61/496 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNT+ RK EF + + +Y CG T Y+ HIGNARP + +DV+ R L +
Sbjct: 1 MITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A +E + I+ + + L P
Sbjct: 60 -RVRYIQNFTDVDDKIIHAANREGVT------WKEISDRYIAAYFTAMDALNVHRADVFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + + +I +I+ +I G+AY ++ + + YG S R +D+ + G RV
Sbjct: 113 RVSETMDDIIRMIETLIERGYAYVTEAGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS YLG+ FD HGGG DLIF
Sbjct: 173 ETKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232
Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQ+ C D K A W+HNGF+ ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQADPCIDADIKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+P VIR +L THYR P+DF+ +RL EA+ L++ + +
Sbjct: 286 YPGEVIRFFILQTHYRSPLDFSDERLKEAQAALARLKGANDVIDELLKREGTADTAADLA 345
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFN 386
+A+ +D NT AI + LA+E + H +
Sbjct: 346 AQAETFLRDFDAAMDDDFNTALAISQMFGLAKEINRYHQEIERGAAFDMAHFRMAAEAYR 405
Query: 387 ASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
A I+GI E + + ++ ++ R K ++ AD IR L+ G ++E
Sbjct: 406 KMAGIIGIFEQDEAAPADDGLTNAIMDFVISLRQEARAQKNWALADKIRDGLKEAGVLIE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D RWK+
Sbjct: 466 DTPT------GVRWKR 475
>gi|294781851|ref|ZP_06747183.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294481662|gb|EFG29431.1| cysteine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 473
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 267/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ I + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT ++ +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT++I MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYKEGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKKDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS CA A W+HNG++N+ G KMSKS+G+FI + ++L +
Sbjct: 233 FPHHENEMAQSKCACG-GTFARYWMHNGYININGEKMSKSSGSFILLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +IRL +L +HYR+P++F+ L + + L + +
Sbjct: 285 FEGRIIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------ 387
K ++ + A+ D NT A+ + +L + K D + + +
Sbjct: 345 LATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVLDEVYSYLV 404
Query: 388 --SAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E NIS IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|254555716|ref|YP_003062133.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
gi|254044643|gb|ACT61436.1| cysteine-tRNA ligase [Lactobacillus plantarum JDM1]
Length = 470
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 167/481 (34%), Positives = 245/481 (50%), Gaps = 53/481 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++NTL R+ F+ I P ++MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+RA ++H ++P + + + F++DTT + T P
Sbjct: 60 -HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ +IP++I +Q +I G+AYE+ ++ + YG S ++ID+ ++G
Sbjct: 113 RASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTAD 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E WESPWG GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS + AN W+HNGF+ + + KMSKS GNF+T+++++
Sbjct: 233 LEFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
++ V+R M T YR PI +T L EA L K
Sbjct: 287 --KTVDPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDT 344
Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
+ +A+ +D N + + A+++LA+ +
Sbjct: 345 AVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKALVQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ G+ + AI+ L+ ER K K F+ AD IR L+++G ILED
Sbjct: 405 LTGVFGV-TFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILEDTPQ 463
Query: 448 P 448
Sbjct: 464 G 464
>gi|158340032|ref|YP_001521202.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|158310273|gb|ABW31888.1| cysteinyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 496
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 171/509 (33%), Positives = 240/509 (47%), Gaps = 66/509 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++NTL + F ++ P + MY CG TVYD H+G+AR + +DVL R L++
Sbjct: 1 MNLTLHNTLTNQKEPFISVHPERVVMYCCGVTVYDNCHLGHARSYMAWDVLRRYLKWCGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDKI+ RA E + + ++ + + +D RL L
Sbjct: 61 --TVRYVQNFTDIDDKILHRAIVEGIT------MQEVSDRYINAYFRDIRRLNILDADDY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP + LIQ + G+AY + ++ + YG S RK+++ K+G
Sbjct: 113 PRVTEHIPAIHQLIQALEQQGYAYAIDGDVYYSVRQFSEYGKLSGRKLEQLKVGAGGRVA 172
Query: 183 YHKKNPA-----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++ DF LWK + P EP WESPWG GRPGWHIECSAM LG+ DIHGGG
Sbjct: 173 DDTQDQKKRDPFDFALWKSAKPGEPAWESPWGLGRPGWHIECSAMIRARLGETIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENEIAQS + A W+HNG + + G KMSKS GNF TI +LL+
Sbjct: 233 GDLVFPHHENEIAQSEVLTG-QPLARYWLHNGMVTVNGEKMSKSLGNFTTIRDLLDGGWA 291
Query: 298 G-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
+RL +L HYR+P+DFT + +
Sbjct: 292 DYPEPVDPMAVRLFVLQGHYRKPLDFTKDAIVASINSWQTLKAGILFGNRHRVALSSPFA 351
Query: 338 -----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------- 382
PQ +S+ SA+ +DLNT A+ L +LA+ + + L
Sbjct: 352 SIQSSPQEPSSEDPWTKRFQSAMDDDLNTSGALAVLFELAKALQREGNRLVHEGKSQSSP 411
Query: 383 -------PIFNASAHILGIEVC-----KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
A +LG+E E K I L+Q+R K + F +AD
Sbjct: 412 ELLWQQWQTLLYLAQVLGLEAKVNSDTDEATGKLDEAVITDLIQQRQTARKQRDFITADD 471
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR QL + G + D + TRW +
Sbjct: 472 IRAQLSAAGITVVDQPDGA-----TRWHR 495
>gi|227888795|ref|ZP_04006600.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
gi|227850632|gb|EEJ60718.1| cysteinyl-tRNA synthetase [Lactobacillus johnsonii ATCC 33200]
Length = 472
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 165/495 (33%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL RK EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y
Sbjct: 1 MIMKVFNTLTRKKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I A +EH ++ + + + F++DT L T
Sbjct: 61 D--VNYVSNFTDVDDKMINEAHKEHTTVEK------LAERYIKAFMEDTEALNIEPATLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 PRATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRARKFPNYGQLSDQNIAELEEGASEHIN 172
Query: 183 YHKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG
Sbjct: 173 EEEQSKKEDPIDFALWKAQKEEDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS + N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 QDLEFPHHENEIAQSEAKTGRK-FVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 289 ----KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLNDENETL 344
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPI 384
+ A+ +D N +A+ ++ LA + +
Sbjct: 345 EDNGLRDDLTQAKAEFIEAMDDDFNVQNALSIMYDLATTLNNHLQKDQVDKPALKRAKKL 404
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I G+ +E IEKL+ +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 LIAWLEIFGVSFNEEQAEN--DDEIEKLIAQRDEARKNKDWAESDRLRAELQAKGIVIED 462
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 463 T------PQGTRWHR 471
>gi|262067257|ref|ZP_06026869.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291379031|gb|EFE86549.1| cysteine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 473
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 176/488 (36%), Positives = 267/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ I + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPIKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT ++ +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANAE------NVSIKEIAERYIKAYFEDTAQINLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT++I MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATDNIDGMINIIKSLVDKGYAYESNGDVYFEVKKYREGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKRDALDFALWKSSKPNEPSWDSPWGKGRPGWHIECSAMSRRYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ VIRL +L +HYR+P++F+ L + + L + +
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENSLKRIKELNRENLDGTNDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNA------ 387
K ++ + A+ D NT A+ + +L + K D + +F+
Sbjct: 345 LATKKEMEAKFIEAMDEDFNTAQALGHVFELVKSVNKALDEGNFSKTAIEVFDEVYSYLV 404
Query: 388 --SAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E NIS IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIEEVLGVKLKLEAEVNNISADLIELILELRKDAREQKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|261599941|dbj|BAI45221.1| cysteinyl tRNA synthetase [Beta vulgaris]
Length = 582
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 179/510 (35%), Positives = 264/510 (51%), Gaps = 74/510 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KK + +YNT+ RK F+ + MYVCG T YDF+HIG+AR + FD+LYR L+Y
Sbjct: 80 IKKDLWVYNTMSRKKEIFKPKVDGKVGMYVCGVTAYDFSHIGHARAYVTFDILYRYLKYL 139
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V YVRN TD+DDKII RA + + + ++ + +F +D + L CL P+
Sbjct: 140 GYD--VCYVRNFTDVDDKIIARANE------VGENPISLSRRFCDEFHQDMSYLHCLPPS 191
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR ++H+PQ+I +I+ I+ +G AY + ++ F P+YG S RK+++ + G RV
Sbjct: 192 VEPRVSDHMPQIIDMIKQIVDNGFAYGVDGDVYFSVEKFPDYGRLSGRKLEDNRAGERVA 251
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NPADF LWK + EP WESPWG GRPGWHIECSAMSS YLG FDIHGGG+DL
Sbjct: 252 IDSRKRNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSSVYLGYSFDIHGGGMDL 311
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEI QSC A E W+HNGF+ + KMSKS GNF TI +++E
Sbjct: 312 MFPHHENEIVQSCAAC-CESNIRYWVHNGFVTINSEKMSKSLGNFFTIRQVIEL------ 364
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------ 342
+ +RL ++ THYR PI+++ L A + QT
Sbjct: 365 -YHPLALRLFLMGTHYRSPINYSDVLLESASERIFYIYQTLQDSQALLSEYGRANLKDSI 423
Query: 343 ------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLP 383
+ + + ++ +DL+T + AL + + L
Sbjct: 424 PQDIVSCINDLQNSFVISMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKRELRVESLAA 483
Query: 384 IFNASAHI---LGIEV---------CKEHLNKNI---SIAIEKLVQERLILLKMKKFSSA 428
+ H+ LG+ +E K + +++ ++ER + K K++ +
Sbjct: 484 LEKTIKHVLTALGLMPSSYSEALHQLREKALKRVKFSETEVQQKIEERDMARKYKEYEKS 543
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D IRK+L + G L D T W+
Sbjct: 544 DAIRKELAAVGIALMDS------PEGTTWR 567
>gi|83859158|ref|ZP_00952679.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
gi|83852605|gb|EAP90458.1| cysteinyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
Length = 462
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 190/480 (39%), Positives = 254/480 (52%), Gaps = 46/480 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T RK +F ID + MYVCGPTVY AHIGN RP + FDVL+RLLR+ YG +
Sbjct: 4 LTLYDTAARKKRDFVPIDADRVTMYVCGPTVYSEAHIGNFRPPVAFDVLFRLLRHIYGSE 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y RNITD+DDKI + A IS+IT K + +D+ L PT +P
Sbjct: 64 HVVYARNITDVDDKINKAAADAGVD------ISVITDKYAAIYREDSAALNITPPTLEPA 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+PQMI +I+ +I G AY A ++F S YG S R +D+ G RV +
Sbjct: 118 ATAHMPQMIAMIEKLIADGFAYAAEGHVLFSVGSYDKYGKLSGRSLDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+PADF+LWK S P EP WE+P+G GRPGWH+ECSAM LG+ DIH GG DL+FPH
Sbjct: 178 KKDPADFVLWKPSKPGEPVWEAPFGDGRPGWHLECSAMIEATLGETIDIHAGGGDLVFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS CA AN W+HNGFL++ KMSKS GN I N+LL+
Sbjct: 238 HENEVAQSVCAHAGAPLANYWLHNGFLSMASEKMSKSLGNVIKPNDLLQ------NGVKG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLSALYN 357
VIR A++ HYR P+D+ + L + + + AV+ AL +
Sbjct: 292 EVIRYALMTGHYRAPLDWNAKLLENTQRSMDRLYGVLRRLKGVNAADVAAPEAVMDALLD 351
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------------LGIEVCKEH 400
DLNT A+ AL ++A + K A + G++ E
Sbjct: 352 DLNTPKALAALFEIAGRANKADSEDAQARAKGELLAAGRLLGLFDQDPDAWFGLDTVDEA 411
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
L I++L+ ERL + K F AD IR+ L +K ++D G W+ K
Sbjct: 412 LR----AEIDQLLAERLAARQAKDFEKADAIREILNAKNVQVDD------GPEGATWRLK 461
>gi|77745319|gb|ABB02560.1| cysteinyl-tRNA synthetase [Lactobacillus reuteri]
Length = 470
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 162/486 (33%), Positives = 248/486 (51%), Gaps = 53/486 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL RK EF+ + P + MYVCGPTVY++ HIGNAR I FD + R L +
Sbjct: 1 MLTIYNTLTRKKEEFKPLHPGVVNMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEFKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F++DT + T P
Sbjct: 60 -KVNYVSNFTDVDDKMIKAAAEQGITVP------QLAEKYINAFMEDTAAINIEPATLHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I ++I +Q ++ G+AY + ++ + + +YG S + +D+ ++G
Sbjct: 113 RATENITEIIKFVQGLVEKGYAYPKDGDVYYRSRKFNHYGQLSGQSLDDLEVGASEHVSA 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N DF LWK + P E W+SPWG+GRPGWHIECS MS+ YLGK DIH GG D
Sbjct: 173 DEVNKKEDPLDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K W+HNGF+ + + KMSKS NFIT++E++
Sbjct: 233 LEFPHHENEIAQSEAETG-QKFVRYWMHNGFVTIGKDNEKMSKSLHNFITVHEII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M T YR PI ++ LT+A+ L+ +
Sbjct: 287 --KEVDPQVLRFFMATTQYRRPIQYSQANLTDAQNNLNHIQIAFDNLTYREQDADEGDVQ 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D+N + I +++L + + +
Sbjct: 345 EVTDRLEQFHHQFITAMDDDINVQNGIATVYELVKYANVYAHQDNVSLGAIQAIKKELVE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ + N+ I++L++ER I K K F+ +D IR L+ +G ILED
Sbjct: 405 LMSIFGVKL-EASDNQINDEKIKQLIEERNIARKNKDFARSDEIRHNLKKQGIILEDTPQ 463
Query: 448 PDNGQR 453
++
Sbjct: 464 GTRHKK 469
>gi|308179697|ref|YP_003923825.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
gi|308045188|gb|ADN97731.1| cysteine--tRNA ligase [Lactobacillus plantarum subsp. plantarum
ST-III]
Length = 470
Score = 371 bits (952), Expect = e-100, Method: Composition-based stats.
Identities = 167/481 (34%), Positives = 246/481 (51%), Gaps = 53/481 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++NTL R+ F+ I P ++MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+RA ++H ++P + + + F++DTT + T P
Sbjct: 60 -HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ +IP++I +Q +I G+AYE+ ++ + YG S ++ID+ ++G
Sbjct: 113 RASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTAD 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E W+SPWG GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETDRKEDPIDFALWKAAKPGEISWKSPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS + AN W+HNGF+ + + KMSKS GNF+T+++++
Sbjct: 233 LEFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
++ V+R M T YR PI +T L EA L K
Sbjct: 287 --KTVDPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDT 344
Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNA 387
+ +A+ +D N + + A+++LA+ + L
Sbjct: 345 AVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAQATVQKETLIALQKALVQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ G+ + AI+ L+ ER K K F+ AD IR L+++G ILED
Sbjct: 405 LTGVFGV-TFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKAQGIILEDTPQ 463
Query: 448 P 448
Sbjct: 464 G 464
>gi|301155906|emb|CBW15375.1| cysteinyl-tRNA synthetase [Haemophilus parainfluenzae T3T1]
Length = 459
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 179/495 (36%), Positives = 251/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEVFKPIHEGKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +D+ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIARGHAYVADNGDVMFDVESFKEYGKLSRQDLDQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWPSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ + L A+ L + A
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVALGGENFVEAFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELAGILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+++R +L + G +LED
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWAAADAAR--------------NELTAMGIVLEDG 450
Query: 446 KNPDNGQRMTRWKQK 460
N T W+++
Sbjct: 451 PN------GTTWRKQ 459
>gi|313904851|ref|ZP_07838223.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
gi|313470284|gb|EFR65614.1| cysteinyl-tRNA synthetase [Eubacterium cellulosolvens 6]
Length = 496
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 176/513 (34%), Positives = 247/513 (48%), Gaps = 80/513 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ YNT+ + I EF+ I + MYVCGPTVY+ HIGNARPMIVFD R + Y
Sbjct: 1 MALRFYNTMTKSIQEFKPIREGEVSMYVCGPTVYNLIHIGNARPMIVFDTARRYMEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDKII++A +E + + I+ + ++ +KD + L T
Sbjct: 61 --RVNYVSNFTDVDDKIIKKANEEGVTSEV------ISQRYIKETMKDMADMNVLPATTH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---V 179
P AT I MI LI+++ G+AYE N + F T YG S + +D+ + G R V
Sbjct: 113 PLATEEIGGMIELIRDLQEKGYAYEVNGTVYFRTRKDEKYGKLSHKNLDDLRSGFRDLKV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGL 238
+ K++P DF+LWK P EP WESPWG+GRPGWH EC MS YL DIH GG
Sbjct: 173 SGEDQKEDPLDFVLWKPKKPGEPFWESPWGQGRPGWHTECCVMSRKYLHSTTIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQ C+ E A+ W+HN FLN++ KMSKS GNF T+ E+
Sbjct: 233 DLIFPHHENEIAQVECSTGEE-FAHYWLHNAFLNIDNVKMSKSLGNFRTVREI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
G + ++R ML HYR ++F+ + + A+ L + + G
Sbjct: 285 GDHYDLQILRFFMLSAHYRRVLNFSTESMEAAKASLGRIRTAVKTLGDRAKAAAAQDLTD 344
Query: 347 ------------------------------------IDPAVLSALYNDLNTVSAIQALHK 370
A+ +DLNT A A+
Sbjct: 345 HERTRLGIDAKGEVIPFEVTADSVTGVLVKPDDMRAFRYDFEQAMDDDLNTADAEAAIFN 404
Query: 371 LARESTK----------NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
L R + + ILG+ V + +++ IE+L+ +R
Sbjct: 405 LVRFANIEVQENSSKAFAEAVKTEIMELCGILGLIV--DVKEEDLDAEIEELIAKRQAAR 462
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
K K F+ AD IR +L +KG L+D + +R
Sbjct: 463 KAKDFAMADAIRDELLAKGIALKDTREGVKWER 495
>gi|149183935|ref|ZP_01862320.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
gi|148848358|gb|EDL62623.1| cysteinyl-tRNA synthetase [Bacillus sp. SG-1]
Length = 465
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 166/486 (34%), Positives = 260/486 (53%), Gaps = 51/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKI+NTL RK EF+ ++ ++MYVCGPTVY++ HIGNARP IVFD ++R Y
Sbjct: 1 MTIKIFNTLTRKKEEFKPLEEGKVKMYVCGPTVYNYIHIGNARPAIVFDTVHRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I+ A + +P I + + + +DT L C
Sbjct: 61 D--VNFVSNFTDVDDKLIKAANELGEDVP------AIAERFIEAYHEDTEALGCQRADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I I+ +I G+AYE+ ++ + T YG S + ID+ K+G R+
Sbjct: 113 PRVTESMDIIIDFIEALIDKGYAYESQGDVYYRTRKFEGYGKLSHQSIDDLKVGARIEAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + E WESPWG+GRPGWHIECSAM+ YLG+ DIH GG DL F
Sbjct: 173 DKKEDPLDFVLWKAAKEGEIFWESPWGQGRPGWHIECSAMAKKYLGETIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + + A W+HNG++N++ KMSKS GNF+ +++++ +
Sbjct: 233 PHHENEIAQSEALN-EKPFARYWMHNGYINIDNEKMSKSLGNFVLVHDII-------KEQ 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
V+R ML HYR PI++ ++ L A+ L + + +
Sbjct: 285 DPQVLRFFMLSVHYRHPINYNLELLENAKSGLDRLKTSYENLKHRREVSAELTDNNEEWL 344
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLAREST----KNHDLLPIFNASA----HILG 393
+ + + +D NT + I L +L+R++ + + + + +A +
Sbjct: 345 EKIASLKNQFIEEMDDDFNTANGISVLFELSRQANYYLMEKNTSITVIDAFSQHFKEFFE 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ K + + IE+++ +R+ K + F AD +R +L++ ILED +
Sbjct: 405 VLGLKLEEAELLDEEIEEMINQRIQARKDRNFQLADELRDKLKAMNIILEDT------AQ 458
Query: 454 MTRWKQ 459
TRWK+
Sbjct: 459 GTRWKR 464
>gi|116333230|ref|YP_794757.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
gi|122270082|sp|Q03SU6|SYC_LACBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116098577|gb|ABJ63726.1| cysteinyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
Length = 470
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 247/493 (50%), Gaps = 60/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NT+ R+ F+ I P + MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 1 MLKVFNTMTRQKETFEPITPGVVNMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I A +E ++P + + F +DT L T P
Sbjct: 61 --VKYVSNFTDVDDKMINEANKEGITVP------ELGDRFIAAFKEDTAALNIEPATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI ++I +Q++I +AY + ++ + +YG + +D+ + G
Sbjct: 113 RATEHINEIIEFVQDLIDKDYAYPVDGDVYYRAHKFSHYGELAHLNLDDLEEGASQHTND 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E W SPWG GRPGWHIECS MS+HYLG+ FDIHGGG D
Sbjct: 173 EETARKEDPVDFALWKGAKPGEISWPSPWGAGRPGWHIECSVMSTHYLGETFDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
LIFPHH+NEIAQS + + W+HNGF+ + + KMSKS GNF+T++++L
Sbjct: 233 LIFPHHQNEIAQSEAKTG-KTFVHYWLHNGFVTIGDDNEKMSKSLGNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ +R M T YR PI +T Q L AE L + + G
Sbjct: 287 --KTVDPQTLRFFMSTTQYRRPIQYTQQNLDTAERNLERLQTAYDNMGYRLKDAEAGNDP 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
I + A+ +D N + I +H+LAR + + +
Sbjct: 345 KVEQETRQIVADYIDAMDDDFNVQNGIAKVHELARLGNVYAERPVVFAGTLDFIRQTLSD 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ GI+ I+ L+ ERL K + F +D IR+QL+S+G ILED
Sbjct: 405 LLSVFGIKFA--AAATLDDDRIQALIDERLAARKSRDFLRSDEIREQLKSQGIILEDT-- 460
Query: 448 PDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 461 ----PQGTRWRKE 469
>gi|269958884|ref|YP_003328673.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
gi|269848715|gb|ACZ49359.1| cysteinyl-tRNA synthetase [Anaplasma centrale str. Israel]
Length = 467
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 196/484 (40%), Positives = 271/484 (55%), Gaps = 47/484 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL F D + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+ Y
Sbjct: 1 MRLHDTLRASKRVFSPRDGKRVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII A E S I+ +T+ T+ F +D L CL PT +P+
Sbjct: 59 EVVYVRNITDVDDKIINAANSEGKS------IAELTAHYTKLFHEDIKELNCLPPTFEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+++I +I GHAY + F S +YG+ S RK+ + G+RV
Sbjct: 113 ATEEIETMLFIIGKLIETGHAYVRGGTVYFSVESYEHYGALSGRKLCDMISGSRVEVVAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T ++ W SPWG GRPGWH+ECSAMS YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWSSPWGVGRPGWHVECSAMSYRYLGESFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENE++QSCCA + A W+HNGFL + G KMSKS GN IT+ LL +
Sbjct: 233 MFPHHENELSQSCCAFHGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLNS----- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIID 348
V+R A L THYR+P+D+ + + +A+ L+K ++ +
Sbjct: 288 -GVDGEVVRYAFLSTHYRKPLDWGDKLVLDAKEALNKIYRSCEGFPAKLLNTGLEYVDVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLN 402
V+S+L +D+NT AI ALH+L +E K D L + N SA ++G+
Sbjct: 347 DGVMSSLQDDINTPGAIAALHELVKEINKASDSDEKLRLAKMLNKSAMLMGLFHNFPERK 406
Query: 403 KNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ IE+L+ +R+ K F AD IRK L S G + D K+ TR
Sbjct: 407 FSSIQNLVNEDEIERLIAKRIEAKKCGDFKLADEIRKNLSSMGIGVSDGKDGS-----TR 461
Query: 457 WKQK 460
W +K
Sbjct: 462 WHRK 465
>gi|49474075|ref|YP_032117.1| cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
gi|61216196|sp|Q6G073|SYC_BARQU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|49239579|emb|CAF25936.1| Cysteinyl-tRNA synthetase [Bartonella quintana str. Toulouse]
Length = 502
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 220/505 (43%), Positives = 298/505 (59%), Gaps = 51/505 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K++ YNTL RK F ID + +R+YVCGPT+YD+AHIGNAR +IVFDVL+RLLRY Y
Sbjct: 1 MRKLRFYNTLTRKKENFTPIDATKVRLYVCGPTIYDYAHIGNARSVIVFDVLFRLLRYVY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G + V YVRNITD+DDKI RA EHP + +NDAI +T + QF +DT L CL PT
Sbjct: 61 GNEHVIYVRNITDVDDKINARAACEHPELALNDAIRQLTERTYSQFQQDTMALGCLLPTS 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTR 178
QPRAT+H+ M LI+ ++ GHAY+ N ++F + P+YG+F++R +DE + G R
Sbjct: 121 QPRATDHLEDMRSLIERLLEKGHAYKVQNHVLFSVRSIRNHPHYGAFAKRSLDEMRAGAR 180
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIECSAM------------- 222
V +K+ DF+LWK S EPGW SP G RPGWHIECSAM
Sbjct: 181 VDVAAYKREEMDFVLWKPSAVGEPGWASPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGL 240
Query: 223 -SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
VFDIHGGG+DLIFPHHENEIAQSC A E+ AN+W+HNGFL +EG+KMSKS
Sbjct: 241 TCDDPTANVFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKS 300
Query: 282 NGNFITINELLETKKF---------GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
GNFITI +LE+ F ++W R +ML THYREP+++T QRL ++
Sbjct: 301 LGNFITIRSILESDFFEFNGVLTDEMKQNWAGLSARFSMLQTHYREPLNWTAQRLVQSSS 360
Query: 333 LLSKWPQTSTS-------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
L +W + +D +V+ AL +DLNT A+ L K +
Sbjct: 361 ELYRWYELLCFEREEMEKNEALDDSVIDALSDDLNTPKALTLLRKFYKAGNAI-----AL 415
Query: 386 NASAHILGIEVCKEHLN----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
++ G+ + S I++ + ERL L+ K++++AD IR +L
Sbjct: 416 ANGMNLFGLLRQEWVQEVECPLFMRKISLNSKFIDQRIAERLRLIHNKEWAAADTIRDEL 475
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
+KG IL+D K+P G+R T W+ +
Sbjct: 476 AAKGVILKDGKDPQTGERTTMWEMR 500
>gi|319404030|emb|CBI77618.1| Cysteinyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
Length = 502
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 218/503 (43%), Positives = 296/503 (58%), Gaps = 51/503 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ YNTL R+ +F ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3 ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHIYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKI +A ++P + +NDAI +T + QF +DT L CL PT QP
Sbjct: 63 NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ ++ +LI+ ++ GHAY A+N I+F SS+ P YG F++R +DE + G R+
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIEC--------------SAMS 223
+KK DF+LWK S EPGW SP G GRPGWHIEC +
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+FDIHGGG+DLIFPHHENEIAQSC E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302
Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NFITI LLE F + W IR +ML THYREP+++T+QRL ++ L
Sbjct: 303 NFITIRSLLEDDFFEFADILSAEVKQIWAGLSIRFSMLQTHYREPLNWTMQRLIQSSSEL 362
Query: 335 SKWP-------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+W +D +++ L NDLNT + I L K +E
Sbjct: 363 YRWYELLRSEKYCLEDNQTVDSSLIKTLSNDLNTSNTITILRKFYKEHNVI-----ALTH 417
Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
LG+ + K I++ + ERL L+ K++++AD IR +L
Sbjct: 418 GMDFLGLLRQELVKEKECPLFIGKTHLNLQFIDQRIAERLALIHNKEWAAADKIRDELAV 477
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G L+D K+P G+R+T W+ K
Sbjct: 478 EGIFLKDSKDPQTGERITTWEMK 500
>gi|89075764|ref|ZP_01162152.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89048496|gb|EAR54071.1| cysteinyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 460
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 174/496 (35%), Positives = 246/496 (49%), Gaps = 75/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ F I P I MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEAFTPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+ RNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFARNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHADFDALGMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L + +I G AY +N +++F+ S +YG S++ +D+ + G RV
Sbjct: 113 RATQFIAEIIALCERLIERGFAYVASNGDVMFEVSKYEDYGRLSKQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 MAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+R ++ HYR ++++ + L +A L + +
Sbjct: 285 DPETVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDTSIEAAGGEEFVARFKE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A + +ARE K L A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVMFDMAREINRLKTDDVTKASALGSRMRELADVLGLLSQEPEAFLQG 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYI--------------RKQLESKGFILED 444
+ IE L+Q+R + R +L + G ILED
Sbjct: 405 GAGEDDNVAEIEALIQQR--------------LDARAAKDWAAADEARDKLLAMGIILED 450
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 451 ------GAQGTTWRRK 460
>gi|21674967|ref|NP_663032.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
gi|34222752|sp|Q8KAK2|SYC_CHLTE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21648199|gb|AAM73374.1| cysteinyl-tRNA synthetase [Chlorobium tepidum TLS]
Length = 487
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 167/505 (33%), Positives = 244/505 (48%), Gaps = 66/505 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IYN+L R F+ I P +YVCGPTVY AH+G+A+ + FDV+ R LR+
Sbjct: 1 MSSLHIYNSLTRTKEPFKPIHPGLATIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHVG 60
Query: 62 GE--KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
E V YV+NITD+ +DKI ++ARQE + T+ F +
Sbjct: 61 EEQGYKVRYVQNITDVGHLTDDADEGEDKIQKQARQERIE------PMEVAQYYTRSFYE 114
Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
D RL P P AT HIP+ I L++ +I GHAYE+N + FD +S YG S R
Sbjct: 115 DMDRLGVERPNIAPTATGHIPEQIALVERLIESGHAYESNGNVYFDVNSFEGYGKLSGRT 174
Query: 170 IDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
E + G RV E+ K+NP+DF LWK++ P W+SPWG G PGWH+ECSAM+ YL
Sbjct: 175 DQEALQSGGRVAERSDKRNPSDFALWKKAEPGHIMKWQSPWGEGYPGWHLECSAMAMKYL 234
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIHGGG++ FPHH+ EIAQS A + W+HN + ++G KM KS NF+
Sbjct: 235 GDTIDIHGGGMENKFPHHDCEIAQSEAATG-KPFVRYWMHNNMVTVDGVKMGKSLKNFVN 293
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI- 346
+ EL + VIR +L +HYR P+DF+ + ++ K +T
Sbjct: 294 LKELFG-------KFDPLVIRFFILQSHYRSPLDFSEAAIRASQSGFEKLQETYKRLVES 346
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------- 387
+ + AL +D NT AI L + + D + A
Sbjct: 347 AEGKGQLDVATFEQKITDALNDDFNTPVAIAVLFEFIKALNGALDKDGLDAASKSGAQNL 406
Query: 388 ----SAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ +LGI ++ L + ++ + L++ R K F+++D IR L
Sbjct: 407 FDSYAGKVLGILKSRDELLAGESGESAQTLNDVMAVLLELRKEARASKDFATSDKIRDLL 466
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
+G ++D + W +K
Sbjct: 467 MERGIEIKDTREGA------TWSKK 485
>gi|189347672|ref|YP_001944201.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
gi|189341819|gb|ACD91222.1| cysteinyl-tRNA synthetase [Chlorobium limicola DSM 245]
Length = 484
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 160/498 (32%), Positives = 230/498 (46%), Gaps = 61/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYN+L R F+ + P + MYVCGPTVY AH+G+A+ + FDV+ R LR
Sbjct: 1 MALQIYNSLSRSKETFEPVHPGVVGMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRQSGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ +DKI +AR E I T+ F D
Sbjct: 61 --RVRYVQNITDVGHLSDDADEGEDKIARQARLEKTD------PMEIAQFYTRSFYDDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P P AT H+P+ I LI+ ++ HAY N + F S P+YG S R E
Sbjct: 113 RLGVERPNIAPTATGHVPEQIALIRQLVGSSHAYVVNGNVYFSVQSFPDYGKLSGRTDQE 172
Query: 173 Q-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ GTR+ + K++P+DF LWK++ WESPWG G PGWH+ECSAMS YLG+
Sbjct: 173 ALQSGTRIEVRNEKRHPSDFALWKKAEEGHIMKWESPWGTGYPGWHVECSAMSMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHH+ EIAQS A W+HN + + G KM KS N + + +
Sbjct: 233 VDIHGGGMENKFPHHDCEIAQSEAATGR-PYVRYWMHNNMVTVGGIKMGKSLKNSVNLKD 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----- 345
L R VIR +L +HYR P+D++ + + L K T
Sbjct: 292 LF-------RETDPMVIRFFILQSHYRSPLDYSEAAIRASSAGLEKLQDTRQRLQKTRPG 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------- 387
+A+ +D NT AI L ++ D +A
Sbjct: 345 TGNFDSTAFTERFTAAMDDDFNTPLAISILFDFSKSVNSALDKQEGLSADSIAEAAAFLD 404
Query: 388 --SAHILGIEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ +LGI + + + + I L+ R+ K K F+ +D IR +L
Sbjct: 405 TFAGKVLGIVSASDEASGHASENSRQTLEKTISILLDMRIEARKNKDFALSDRIRDRLLE 464
Query: 438 KGFILEDYKNPDNGQRMT 455
G ++D + + T
Sbjct: 465 AGVEVKDTREGVSWSLKT 482
>gi|49475313|ref|YP_033354.1| cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
gi|61216197|sp|Q6G5G9|SYC_BARHE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|49238119|emb|CAF27326.1| Cysteinyl-tRNA synthetase [Bartonella henselae str. Houston-1]
Length = 503
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 216/506 (42%), Positives = 299/506 (59%), Gaps = 52/506 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++ YNTL RK F ID + +R+YVCGPTVYD+AHIGNARP+IVFD+L+RLLR+ Y
Sbjct: 1 MRELRFYNTLTRKKENFIPIDATRVRLYVCGPTVYDYAHIGNARPVIVFDILFRLLRHVY 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G + V Y RNITD+DDKI RA E+P + +NDAI +T QF +DT L CL PT
Sbjct: 61 GNEHVIYARNITDVDDKINARAAYEYPELALNDAIRQLTQLTYTQFQQDTMALGCLPPTI 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS---SIPNYGSFSRRKIDEQKMGTR 178
+PRAT+H+ +M LI+ ++ GHAY+A N ++F S + P+YGSF++R +DE + G R
Sbjct: 121 EPRATDHLEEMRSLIERLLEKGHAYKAENHVLFSVSSIRNDPHYGSFAKRSLDEMRAGAR 180
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIECSAM------------- 222
V +K+ DF+LWK S EPGW SP G RPGWHIECSAM
Sbjct: 181 VDVASYKREEMDFVLWKPSAEGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLAPYGGGL 240
Query: 223 -SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
VFDIHGGGLDLIFPHHENEIAQSC A E+ AN+W+HNGFL +EG+KMSKS
Sbjct: 241 TCDDPTENVFDIHGGGLDLIFPHHENEIAQSCSAFGTERMANLWMHNGFLQVEGKKMSKS 300
Query: 282 NGNFITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
NFITI +LE+ ++W R +ML THYREP+++T QRL ++
Sbjct: 301 LSNFITIRSILESDFFEFNGVLTNEMKQNWAGLSARFSMLQTHYREPLNWTAQRLMQSSS 360
Query: 333 LLSKWPQTSTS--------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
L +W + +ID ++++AL +DLNT A+ L K +
Sbjct: 361 ELYRWYELLRCEKTEMEKKNEVIDDSLINALSDDLNTPKALTLLRKFYKRGNAVS----- 415
Query: 385 FNASAHILGIEVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ + G+ + I++ + ERL L+ K++++AD IR +
Sbjct: 416 LASGMNFFGLLRQEWVRDGKCPLFMRKTSLDEKFIDQRIAERLRLIHNKEWTAADTIRDK 475
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
L ++G +L+D K+P G+R T W+ K
Sbjct: 476 LAAEGIVLKDIKDPQTGERTTMWEIK 501
>gi|150402240|ref|YP_001329534.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166200151|sp|A6VG07|SYC_METM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150033270|gb|ABR65383.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 476
Score = 370 bits (951), Expect = e-100, Method: Composition-based stats.
Identities = 168/494 (34%), Positives = 244/494 (49%), Gaps = 59/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL RK EF+ ++ + ++MYVCGPTVYD H+G+ R + FD++ R L +
Sbjct: 1 MLKVYNTLTRKEEEFKPLNENEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+R++++ ++ F+ D L P
Sbjct: 60 -TVNLVINFTDIDDKIIKRSQEKG------KNPKELSETFVNVFLNDMATLKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HIP++I I+ +I G AY+ N + F+ NYG S +++ G R+
Sbjct: 113 KVTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLISGARIEPSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FP
Sbjct: 173 EKKNPEDFALWKTAKPGEPKWESPFGEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N W+H GF+ + G KMSKS GNFITI ++ + +
Sbjct: 233 HHENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFITIEDI-------SKEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------- 340
++R + HYR PID+T + ++ + L K
Sbjct: 285 PEILRFFFIQRHYRSPIDYTAESMSHVKNNLEKIYNVIENIRISLEKSEKSGIWNENEFL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNA 387
A+ +D NTV A++++ +++ K L+ F
Sbjct: 345 LYDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKI 404
Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ KE N ++ L++ R L K + +D IR L+ G+ +ED
Sbjct: 405 VGEIFGLFENYFKESSESNDEGFVKFLIELRSDLRLQKNYEMSDKIRDGLKELGYQIEDN 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T +K+
Sbjct: 465 P-----KEGTVFKK 473
>gi|21231689|ref|NP_637606.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66768188|ref|YP_242950.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
str. 8004]
gi|24418691|sp|Q8P8J0|SYC_XANCP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|81305837|sp|Q4UVJ3|SYC_XANC8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21113388|gb|AAM41530.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
str. ATCC 33913]
gi|66573520|gb|AAY48930.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
str. 8004]
Length = 457
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 192/477 (40%), Positives = 263/477 (55%), Gaps = 39/477 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I HAY A ++F +S +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASAHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAATHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------IDPAVLSA 354
P +R A+L HYR+P+D++ + +A+ L + T I V +A
Sbjct: 286 KHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLHDVAASAVIPAPVEAA 345
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE------------VCKEHLN 402
L +DLNT A+ + ++A E+ K +D A +LG +
Sbjct: 346 LDDDLNTPQALAEVARIAGEARKANDAADRARLKAELLGAGLALGLLQQEPAAWFSRGAD 405
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I LV ER K K F+ AD IR+QL +G +LED + RWK+
Sbjct: 406 AGDDARIAALVDERSAAKKAKDFARADAIRQQLADEGIVLEDT------AQGVRWKR 456
>gi|290968519|ref|ZP_06560058.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781515|gb|EFD94104.1| cysteine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 481
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 162/502 (32%), Positives = 238/502 (47%), Gaps = 65/502 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + +YNTL RK +F + P ++MYVCG T Y+ +H+GNARP + +DV+ R L +
Sbjct: 1 MRDLYVYNTLTRKKEKFVPLTPGQVKMYVCGITPYNHSHMGNARPFVTWDVIKRYLEHLG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VT+++N TD+DDKII A E I ++ + L
Sbjct: 61 Y--AVTHIQNFTDVDDKIIHAANGEQV------RWDTIANRYIASYFDVMDALHVRHADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + H+P++I +IQ ++ G AY ++ + +YG S R +D+ + G R+
Sbjct: 113 YPRVSEHMPEIIQMIQTLLDKGMAYVVEQDVYYSVEKFVDYGKLSGRTLDDMQAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK + EP WESPWG+GRPGWHIECSAMS YLGK FD HGGG DLI
Sbjct: 173 DTRKHHPMDFALWKGAKEGEPSWESPWGQGRPGWHIECSAMSCKYLGKTFDFHGGGSDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + W+HNGF+ + KMSKS NF + ++L
Sbjct: 233 FPHHENEIAQSEACTGVSPMVRYWLHNGFITINSEKMSKSLHNFFLVKDVLA-------Y 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R ++ HYR P+DFT RL E L + + +
Sbjct: 286 YDPDAVRFFLISNHYRSPLDFTDARLEEMTRSLERLRTSIMNVLELATMPAGGKSAEAAA 345
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------------LP 383
+ +A+ +D NT A AL +LA++ +
Sbjct: 346 LLTEAQQVAEDFETAMCDDFNTALAAAALFELAKKVNIYREAVVNNGVPVDTSVITEVKR 405
Query: 384 IFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
IF ILGI + +E +++ R + K++ AD IR +L++
Sbjct: 406 IFKMMTDILGILESAWNGQTSSADASEYAALVEAVLEIRKECREKKQYELADAIRDKLQA 465
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
G +ED + RWK+
Sbjct: 466 LGITIEDS------PQGARWKK 481
>gi|78357164|ref|YP_388613.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|109894898|sp|Q30ZH8|SYC_DESDG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78219569|gb|ABB38918.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 485
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 175/499 (35%), Positives = 243/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK +F +YVCG T YD H+G+AR + FDVL R LR+ +
Sbjct: 1 MQLYNTLTRKKEKFIPQREGKASVYVCGITAYDLCHLGHARSSVAFDVLVRYLRHTGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII+RA + + + K F +D RL CL +PR
Sbjct: 60 -VTFVRNFTDVDDKIIKRAGETGLTST------EVAEKYMAAFHEDMDRLGCLRADIEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HI +MI L +++I G AY + ++ F S +YG S R +D+ + G RV
Sbjct: 113 CTQHIGEMIALCEDLISKGKAYSTASGDVYFRVRSFASYGKLSGRDVDDMRSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG GRPGWHIECSAMS +L DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGNGRPGWHIECSAMSEKHLPLPLDIHGGGQDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A E A W+HNGF+ + KMSKS GNF TI ++L + +
Sbjct: 233 HHENEIAQTEAATGKE-FARYWVHNGFVQVNAEKMSKSLGNFSTIRDIL-------QGYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------------- 342
+R +L HYR PIDFT + EAE L + QT
Sbjct: 285 PETLRYFLLTKHYRSPIDFTFDGMDEAEKNLRRIYQTLNLVENELQKTKWSAAPLPEEVL 344
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS------------- 388
+ A A+ +DLNT +A+ + L R + + + ++
Sbjct: 345 SEMDETERAWNEAMEDDLNTAAALGHIFGLVRLVNRIIEDKTMRKSAQARDALLRMQSMM 404
Query: 389 ---AHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ + + +E L+ ER K K F +D IR+
Sbjct: 405 ARWGAVLGLFTRQPAEFLREMRDCRAARRDVDTARVETLLLERQEARKAKDFERSDAIRE 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L G ++D
Sbjct: 465 ELARMGVEVQDTPAGAAWD 483
>gi|149914707|ref|ZP_01903237.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
AzwK-3b]
gi|149811500|gb|EDM71335.1| pyrroloquinoline quinone biosynthesis protein PqqB [Roseobacter sp.
AzwK-3b]
Length = 462
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 210/461 (45%), Positives = 274/461 (59%), Gaps = 20/461 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNT R + ++P N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1 MTIRLYNTKARAKQVLEPLNPDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQE-HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRN TD+DDKI RA + +N I+ IT++ T F+ D L L P
Sbjct: 61 PDHVTYVRNFTDVDDKINARAIENVGKGGDVNAEIARITAQTTHWFLDDMGALGALEPDA 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +IPQMI +I+++I GHAYEA ++F S +YG S R +D+ G+RV
Sbjct: 121 MPRATQYIPQMIAMIEDLIGRGHAYEAEGHVLFAVDSYADYGRLSGRSVDDMIAGSRVEV 180
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K+NP DF+LWK S+ PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+
Sbjct: 181 APYKRNPMDFVLWKPSSADLPGWDSPWGRGRPGWHIECSAMSHELLGESFDIHGGGNDLM 240
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA A IW+HN L +EG+KMSKS GNF T+++LLE
Sbjct: 241 FPHHENEIAQSCCAHPGSGFARIWMHNEMLQVEGKKMSKSLGNFFTVHDLLE------EG 294
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-QTSTSKGIIDPA--VLSALYND 358
P VIR L THYR+P+D+T ++ EA+ L KW Q +G +P V+ A+ +D
Sbjct: 295 VPGEVIRFVFLSTHYRKPMDWTAEKAREAQATLRKWYRQAEQGEGNAEPYVAVVEAVSDD 354
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-----CKEHLNKNISIAIEKLV 413
LNT AI LH+L D A+ LG+ ++S +L
Sbjct: 355 LNTPKAITELHRL-----SQADDRSTLRATLRFLGLMADGVPDWAARPVADLSALETRLA 409
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
Q R ++ K FS D ++ L + G + K+
Sbjct: 410 QARAAAMQSKDFSEVDRLKAALVAVGVEVRMSKDGVELVPG 450
>gi|291279235|ref|YP_003496070.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753937|dbj|BAI80314.1| cysteinyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 481
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 253/486 (52%), Gaps = 55/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL K EF + + +RMYVCG TVYD+ HIG+AR +VFD++ R L Y E
Sbjct: 1 MLIIFNTLTGKKEEFIPLQDNKVRMYVCGVTVYDYCHIGHARSSVVFDIIRRYL--IYKE 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TDIDDKII+R+ +E N +T K ++ D +L + P P
Sbjct: 59 YDVTFVKNFTDIDDKIIKRSNEE------NIHWKELTEKFIKEHDYDMEKLNIMPPDFTP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT I +MI L + +I G+AY + ++ + +YG S+R +DE G RV
Sbjct: 113 KATEFIDEMIKLCEKLIEKGYAYVVDGDVYYRVEKFKDYGKLSKRNLDELLAGARVEVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK+S EP WESPWG+GRPGWHIECS MS+ LG FDIHGGG DLIFP
Sbjct: 173 RKENPLDFALWKKSKENEPYWESPWGKGRPGWHIECSVMSAKLLGIPFDIHGGGKDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + A WIHNGF+N+ KMSKS GNF TI E++ + +
Sbjct: 233 HHENEIAQSEAA-EEKMFAKYWIHNGFVNINKEKMSKSLGNFFTIREII-------KEFD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
V+R +L THYR PIDF+ L EAE L++
Sbjct: 285 PEVLRFFLLTTHYRSPIDFSFDHLVEAEQSLNRIYTFLDDLEHYVVSKKGKNYLEEANKI 344
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASAH---------- 390
+++ +D N+ A+ A+ +E + + + +
Sbjct: 345 FENFKKEFETSMDDDFNSAKALAAIFDYIKEINRLLNQKVVKETYEEILKLTNNFKKIVN 404
Query: 391 -ILGI--EVCKEHLNKNISIAIEKL---VQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGI + KE N+ I+ +L ++ER K K F AD IR +LES G L D
Sbjct: 405 QVLGIINKTPKEWFASNLPISESELIKKIEERTNARKNKNFELADKIRDELESLGIELLD 464
Query: 445 YKNPDN 450
Sbjct: 465 TPTGTR 470
>gi|226944443|ref|YP_002799516.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
gi|259511824|sp|C1DHE6|SYC_AZOVD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226719370|gb|ACO78541.1| cysteinyl-tRNA synthetase [Azotobacter vinelandii DJ]
Length = 461
Score = 370 bits (950), Expect = e-100, Method: Composition-based stats.
Identities = 183/481 (38%), Positives = 259/481 (53%), Gaps = 48/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+TL + F+ ++ + +RMYVCG TVYDF HIG+AR M+ FDV+ R LR+
Sbjct: 1 MTLSIYSTLSKGKEAFKPLEGNKVRMYVCGMTVYDFCHIGHARVMVAFDVVSRWLRHSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII RA + ++ + + +D RL L P +
Sbjct: 61 D--VTYVRNITDIDDKIIRRANENG------ESFQDLVGRMIAAMHEDEARLNVLRPDSE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HI M +I+ +I +AY N ++ + YG SRRKI++ K+G R+
Sbjct: 113 PRATDHIAGMHAMIRTLIDKSYAYAPGNGDVYYRVGKFEGYGKLSRRKIEDLKIGARIEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK + P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL+
Sbjct: 173 GEAKEDPLDFVLWKGAKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGPDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A ++ ANIW+H G + ++G KMSKS GNF TI E+LE
Sbjct: 233 FPHHENEIAQSEAATG-KRYANIWMHAGAVRVDGEKMSKSLGNFFTIREVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLS 353
+ V+R ++ +HYR PI+++ L EA L ++ +
Sbjct: 285 YHPEVVRYLLVSSHYRSPINYSEDSLREARAALERFYNALKGLPAAQPTGGDEYVARFNA 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
A+ +D NT A L +LARE ++ DL + +A + + L ++
Sbjct: 345 AMNDDFNTPEACAVLFELAREVNRLRDTDLQSAASLAARLKELGGLLGVLQLEPEAFLQA 404
Query: 412 LVQERLILLKM--------------KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+R+ K ++ +D IR QL + G +LED KN T W
Sbjct: 405 GAADRVDA-AEVEALIAARLAARAGKNWAESDRIRDQLAAMGVLLEDGKN------GTTW 457
Query: 458 K 458
+
Sbjct: 458 R 458
>gi|254302121|ref|ZP_04969479.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322313|gb|EDK87563.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 473
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 176/488 (36%), Positives = 268/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT+++ +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +I++++ G+AYE+N ++ F+ + YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIKSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C A W+HNG++N+ G+KMSKS+G+FI + ++L +
Sbjct: 233 FPHHENEMAQSKCGCG-GTFARYWMHNGYININGQKMSKSSGSFILLRDIL-------KH 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P++F+ L + + L + T +D
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENLKGTDDCQDL 344
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------LPIFNA------ 387
+ A+ D NT A+ + +L + K D L + N
Sbjct: 345 LATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEVNISEKGLEVINEVYSYLV 404
Query: 388 --SAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|167752833|ref|ZP_02424960.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
gi|167659902|gb|EDS04032.1| hypothetical protein ALIPUT_01094 [Alistipes putredinis DSM 17216]
Length = 490
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 169/497 (34%), Positives = 254/497 (51%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ +YNTL+R+ F+ I+P ++ MYVCGPTVY H+G+ARP + FD+L+R LR
Sbjct: 1 MESKLTLYNTLDRRKETFEPINPPHVGMYVCGPTVYGDPHLGHARPAVTFDLLFRYLRSL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRN+TD+ +DKI ++AR E + T+++ +
Sbjct: 61 GY--KVRYVRNVTDVGHLEHDADDGEDKISKKARLEQLE------PMEVAHYYTERYHRA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I +++ I+ +G AYE+N + FD +YG S
Sbjct: 113 MDELNVLSPSIEPCASGHIIEQIAMVKEILDNGFAYESNGSVYFDVEKYNRKYSYGRLSG 172
Query: 168 RKIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ TR + K++ DF LWK+++P W SPW G PGWH+ECSAMS+
Sbjct: 173 RNLDDILTNTRELDGQGDKRHSCDFALWKKASPEHIMRWPSPWSDGFPGWHMECSAMSTK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS A + A WIHN + + G+KM KS GNF
Sbjct: 233 YLGQRFDIHGGGMDLMFPHHECEIAQSTAALGHDS-AKYWIHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL K +++ IR +L HYR +DF+ + L AE L + + +
Sbjct: 292 ITLEELFTGNHKLLTQAYSPMTIRFFVLQAHYRSTLDFSNEALQAAEKGLDRLMKAVEAL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK-----------NHD 380
I P AL +DLN+ AI AL R + + +
Sbjct: 352 DKIKPSEQSTVDPAELETRCREALDDDLNSPMAISALFDWVRIINQLVEGQQRITAADLE 411
Query: 381 LLPIF--NASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
L ILG+ K ++ + L+ R K ++ +D IR +L
Sbjct: 412 KLREIVRRYVFDILGLRDEKAASAGGKDLVTPLVNMLLDLRQAAKTEKNWALSDKIRDEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ G ++D K+ + +
Sbjct: 472 TAIGIRVKDRKDGCDWE 488
>gi|303249127|ref|ZP_07335367.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302489452|gb|EFL49399.1| cysteinyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 485
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 170/499 (34%), Positives = 243/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NT+ R F + P + MYVCG T YD HIG+AR +VFDVL R LR+ +
Sbjct: 1 MQLFNTMARAKEPFSPLHPCKVAMYVCGITAYDLCHIGHARSSVVFDVLVRYLRHLGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII++A E + + I + F +D +L L +PR
Sbjct: 60 -VTFVRNFTDVDDKIIKKAASEGAT------CAGIAERYIAAFYEDMDKLGILRADAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++ M + + +I GHAY ++ F S +YG S R I++ + G RV
Sbjct: 113 ATEYVAAMADMAERLIETGHAYRTPSGDVYFRVRSFADYGKLSGRDIEDMRAGARVAPGD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK S P EP WESP+G GRPGWH+ECS MS LG FDIHGGG DLIFP
Sbjct: 173 EKEDPLDFALWKASKPGEPVWESPFGPGRPGWHLECSVMSEKLLGIPFDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E W+HNGF+ + KMSKS GNFITI ++ + +
Sbjct: 233 HHENEIAQSEAATGKE-FCRFWVHNGFVRINTEKMSKSLGNFITIRDI-------YKRYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
V+R ++ +HYR P+D++ Q L EAE + +
Sbjct: 285 PEVLRFFLVASHYRSPLDYSDQALDEAEKGIKRLYAAKGQMEQALTRAKWSGTKLPAEIA 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
+ ++A+ +D NT A+ + R + + + +L F
Sbjct: 345 EELARHEQGFIAAMDDDCNTAQALGHVFGAVRLAGRLLEDKTLAKSAETADILRRILADF 404
Query: 386 NASAHILG------------IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+ ILG ++ C+ ++ LV ER K K F +D IR
Sbjct: 405 ETWSGILGVCGRDSREFLDALKACRAARLGIDPTRVDALVAERQDARKAKDFPRSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G + D
Sbjct: 465 ELATLGVTVMDTPTGPQWD 483
>gi|241662706|ref|YP_002981066.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
gi|240864733|gb|ACS62394.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12D]
Length = 463
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 177/491 (36%), Positives = 255/491 (51%), Gaps = 61/491 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAA 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + +S +T + +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETMSALTGRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
++PRAT ++PQM+ +I + +G AY+ + ++ + P YG S + +++ + G RV
Sbjct: 112 YEPRATEYVPQMLGMIGKLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG+ FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 232 GADLQFPHHENEIAQSEGATG-KTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + A V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEHL-- 401
L A+ +D NT A+ L +LA E K +L A A +LG+ H
Sbjct: 344 SHGKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVLGLLGRDPHAFL 403
Query: 402 ------NKNISIAIEKLVQERLILL-------KMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + +E ++ER IR L + G +LED
Sbjct: 404 QGGVSPDGLDAAEVEARIEERRAAKAARDFARAD-------AIRADLLAAGIVLEDKPGG 456
Query: 449 DNGQRMTRWKQ 459
+T W++
Sbjct: 457 -----VTEWRR 462
>gi|255994717|ref|ZP_05427852.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
gi|255993430|gb|EEU03519.1| cysteine--tRNA ligase [Eubacterium saphenum ATCC 49989]
Length = 462
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 160/474 (33%), Positives = 242/474 (51%), Gaps = 48/474 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT+ + EF I+ +YVCGPTVY+F H+GNARP++VFD L R L Y
Sbjct: 1 MKIYNTMTGEKEEFVPINEGEANIYVCGPTVYNFFHLGNARPLVVFDCLRRYLEYIGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII +AR+E + + ++ +++ +D L + P+
Sbjct: 59 RVNFVQNFTDVDDKIINKAREEGITA------NEVSINYIKEYFQDAKALNVREASLHPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++ +I I+ +I G AYE + ++ + T + YG S + IDE + G R+ +
Sbjct: 113 VTENMSDIIAFIEKLITKGFAYEVDGDVYYKTRAFSEYGKLSHQNIDELEAGARINIEEK 172
Query: 185 KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K +P DF LWK P E WESPWG GRPGWHIECSAM+ +LG DIH GG DL FP
Sbjct: 173 KHDPLDFALWKARKEPDEIAWESPWGLGRPGWHIECSAMAQKFLGDTIDIHAGGRDLCFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A W+HNG++ + K+SKS GNF T+ ELLE +
Sbjct: 233 HHENEIAQSEACTGR-PFARYWMHNGYITMNKEKVSKSKGNFFTVRELLE-------EFD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS- 353
+R +L HYR PI+F+ + + +A+ L + + + +G + ++
Sbjct: 285 GETLRFFLLQGHYRNPIEFSKELIYQAKAGLDRIRRAKENLQYIIENGHEGEVSEDCINQ 344
Query: 354 ----------ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ +DLNT AI + ++ + + L ++ILG
Sbjct: 345 LNKRIDSFKMHMEDDLNTADAITDIFEMVTDINSQLEKNGKEYARLALSKLQEVSNILGF 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + I ++ L ER K K F AD +R ++ G+ ++D
Sbjct: 405 LQGE--GTEEIPENVKILADERQEARKNKDFKRADELRDEVLKLGYEIKDMPEG 456
>gi|329116688|ref|ZP_08245405.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
gi|326907093|gb|EGE54007.1| cysteine--tRNA ligase [Streptococcus parauberis NCFD 2020]
Length = 447
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 161/466 (34%), Positives = 241/466 (51%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+++ R + +F I + + MYVCGPTVY++ HIGNAR + FD + R Y +
Sbjct: 1 MIKIYDSMTRSLRDFYPIKENQVNMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII A Q + + K F++DT +L + P
Sbjct: 61 --VNYISNFTDVDDKIINAAAQAKMT------PKELADKFIAAFMEDTAQLGIKPASQNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ Q+I + +I G AY++ ++ F NYG + + +++ ++G
Sbjct: 113 RVMDYMDQIIDFVAALIEKGFAYQSEGDVYFRVDKSSNYGKLANKTLEDLEIGASGRTDT 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETDLKENPLDFALWKSAKVGEISWESPWGAGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNF+T++++L+T
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVNVDNEKMSKSLGNFVTVHDMLQTV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS------- 353
V+R + YR+PI+FT + + +AE+ L T + D +
Sbjct: 287 --DGQVLRFFLATQQYRKPINFTEKAIHDAEVNLKYLKNTQSQPLTGDASAEELQSYVTA 344
Query: 354 ---ALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D N + I + A+ H + F + + GI ++ LN +
Sbjct: 345 FTDAMDDDFNAANGITVVFDFAKWINSGHYTEAVKAAFESMLDVFGIIFQEDVLNAD--- 401
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE L+ +R + F+ AD IR QL ++G L D K+ R
Sbjct: 402 -IEALIADRQAARASRDFAKADAIRDQLAAQGIKLLDTKDGVRWTR 446
>gi|296327724|ref|ZP_06870264.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296155162|gb|EFG95939.1| cysteine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 473
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 174/488 (35%), Positives = 264/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
V YV+N TD+DDK+I +A E N +I I + + + +DT+++ +
Sbjct: 60 -KVNYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEEGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +IQ+++ G+AYE+N ++ F+ + YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P++F+ L + + L + T +D
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQEL 344
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
+ A+ D NT A+ + +L + K D I
Sbjct: 345 LATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLV 404
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|291543500|emb|CBL16609.1| cysteinyl-tRNA synthetase [Ruminococcus sp. 18P13]
Length = 464
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 164/480 (34%), Positives = 251/480 (52%), Gaps = 48/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT+ RK E + +Y CGPTVY+F HIGNARP+ FDVL R L +
Sbjct: 1 MYLYNTMSRKKEELLPQQGKQVNIYACGPTVYNFIHIGNARPICAFDVLRRYLTWRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TD+DDKII+RA +E S + + K ++ D L + P+
Sbjct: 59 TVKYVQNFTDVDDKIIKRANEEGSSA------AQVAEKYIAEYKTDAHGLNVMDADVHPQ 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + +I ++ ++ GHAYEA+ ++ F T+S P YG S+ +++ + G R+
Sbjct: 113 VTTCMQDIIDFVKALVDSGHAYEADGDVYFRTASFPEYGKLSKNSMEDLQAGARIGVDER 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF +WK + P EP W+SPWG+GRPGWHIECSAMS YLG DIH GG DLIFPH
Sbjct: 173 KESALDFAVWKAAKPGEPYWDSPWGKGRPGWHIECSAMSRKYLGDTLDIHCGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + AN+W+HNG++N++ +KMSKS GNF T E+ E +
Sbjct: 233 HENEIAQSESVTG-KPLANLWMHNGYINVDNKKMSKSLGNFFTAREVAE-------KYGY 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
V+R M+ HYR PI++ V+ L + L + +
Sbjct: 285 EVVRYMMVQAHYRSPINYCVELLDACKASLERLYTCRDTLDRAIANAPAGAADPDSLALF 344
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILG 393
A ++A+ +DLNT + L L R+ + +F+ +LG
Sbjct: 345 DQRKQAFITAMDDDLNTADGVSVLFDLVRDLNTRSNDPATTKDTLTAGARLFDELTGVLG 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ ++ N+ I +++LV R + K K F+ AD +R ++ + G+ +++ + +
Sbjct: 405 LLYNRKQGNE-IPAQVQELVDARTVARKAKDFAEADRLRDEIAALGYAVKETRQGVEITK 463
>gi|212723404|ref|NP_001131561.1| hypothetical protein LOC100192902 [Zea mays]
gi|194691858|gb|ACF80013.1| unknown [Zea mays]
Length = 573
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 188/508 (37%), Positives = 268/508 (52%), Gaps = 74/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YNT RK +F+ DP + MYVCG T YD +HIG+AR + FDV+YR LRY
Sbjct: 74 RELHLYNTKSRKKEQFRPRDPGGEVGMYVCGITPYDDSHIGHARAYVAFDVVYRYLRYLD 133
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YVRN TDIDDKII RA Q + + ++ + + F+ D L CL P+
Sbjct: 134 YE--VRYVRNFTDIDDKIIARANQ------LGEDPFNLSKRFSDDFLLDMANLQCLPPSV 185
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PR ++HI ++I +I+ I+ + AY ++ F S P+YG S RK+D+ + G RV
Sbjct: 186 EPRVSDHIDEIINMIKQILDNSCAYVVGGDVYFSVDSFPDYGELSGRKLDDNRAGERVSV 245
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG FDIHGGG DLI
Sbjct: 246 DERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 305
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + T N WIHNGF+N+ +KMSKS GNF+TI +++E
Sbjct: 306 FPHHENEIAQSRAAC-CDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRKVIEM------- 357
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------- 354
+ +R+ +L THYR PI++T+++L L QT I S
Sbjct: 358 YHPLALRMFLLGTHYRSPINYTIEQLNVTSDRLYYTYQTLLDCEEICQQQQSNTGNSLPA 417
Query: 355 ----------------LYNDLNTVSAIQALHKLAREST------------KNHDLLPIFN 386
+ +DL+T A+ A+ + + K + L
Sbjct: 418 NTLNYIQKLHEEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQDKRLESLSALE 477
Query: 387 A----SAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
+LG+ E ++ +K + + + ++ER K K++ +D
Sbjct: 478 EKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAARKAKQYEKSDE 537
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IRK+L + G L D + T W+
Sbjct: 538 IRKELAAIGIALMDGPD------GTTWR 559
>gi|296534285|ref|ZP_06896763.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
gi|296265401|gb|EFH11548.1| cysteine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
Length = 476
Score = 370 bits (949), Expect = e-100, Method: Composition-based stats.
Identities = 204/493 (41%), Positives = 270/493 (54%), Gaps = 57/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +N+ R+ F +DP ++R+YVCGPTVYD AH+GNARP++VFDVL RLLR +
Sbjct: 3 ELAFHNSATRQREIFTPLDPQHVRLYVCGPTVYDLAHLGNARPVVVFDVLARLLRRRF-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITD+DDKI R+++ + I+ IT++ T F +D L CL P +P
Sbjct: 61 PRVTYVRNITDVDDKINARSQESG------EPIAAITARTTADFHRDMAALGCLPPDEEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT++I QMI LI+ +I +GHAY A ++F SS P YG+ S R DE G RV
Sbjct: 115 RATDNIAQMIQLIERLIANGHAYAAEGHVLFSVSSFPGYGALSGRSPDEMLAGARVEIAP 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K+ DF+LWK S+ PGW+SPWGRGRPGWHIECSAMS YLG FDIHGGG DLIFP
Sbjct: 175 YKREAGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMSWRYLGTDFDIHGGGHDLIFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS CA + A W+HNG L ++G KMSKS GNF+T+ ++L W
Sbjct: 235 HHENEVAQSVCAFPGSRFARTWLHNGMLLVDGEKMSKSLGNFLTVRDILGRGA-----WA 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------GIIDPAVL 352
RL +L THYR +D+TV+RL EA+ L + + L
Sbjct: 290 GEAFRLLLLKTHYRAALDYTVERLEEAKAELDDFYALLARDLPQPEADDALVAEMAEWAL 349
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL----------- 401
L +DLNT AI L L R + H +G + +
Sbjct: 350 EPLADDLNTPLAIARLRDL-RTLENVATVGGSATTVLHRIGRDWQPDSGQAAAALRQAAA 408
Query: 402 ---------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ S AIE +Q RL K K ++ AD IR L ++G +LED
Sbjct: 409 LLGLLGGDARAWRQGGEGDSAAIEAAIQARLDARKAKNWAEADRIRADLLAQGIVLED-- 466
Query: 447 NPDNGQRMTRWKQ 459
G T W++
Sbjct: 467 ----GAGGTTWRR 475
>gi|332703611|ref|ZP_08423699.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332553760|gb|EGJ50804.1| cysteinyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 485
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 170/499 (34%), Positives = 243/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK F+ P + MYVCG T YD HIG+AR +VFD+L R LR E
Sbjct: 1 MQLYNTLRRKKESFEPRVPGKVSMYVCGITAYDLCHIGHARSAVVFDILVRYLRSTGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT++RN TD+DDKII RA + S I K + F +D +L L +P+
Sbjct: 60 -VTFIRNFTDVDDKIINRANERGVSS------QEIAEKYIKTFHEDMDKLNVLRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HIP+M+ L +I AY+ + ++ F + YG S R ID+ + G R+
Sbjct: 113 CTEHIPEMLTLTGELIAKDRAYKTLSGDVYFRVRAFEPYGKLSGRDIDDLRAGARITPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG+GRPGWH+ECSAM++ Y+ DIHGGG DLIFP
Sbjct: 173 AKEDPLDFALWKSAKPNEPFWESPWGKGRPGWHLECSAMAAKYVDLPLDIHGGGQDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A E A W+HNGF+ + KMSKS GNF TI ++L+ +
Sbjct: 233 HHENEIAQTEAATDGE-LARFWVHNGFVQINQEKMSKSLGNFFTIRDILD-------KFM 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
V+R +L HYR P+DF+ + L EAE L +
Sbjct: 285 PEVLRFFLLGQHYRSPLDFSFESLEEAEKGLRRIYAAMGQMREALQKDKWGKAALPTEIT 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------F 385
+ A A+ +DLNT +A+ + R + + D +
Sbjct: 345 DELSTAEKAWDEAMTDDLNTAAALGHVFTAVRLAGRVMDDKAMRKSEGARNFWQRVLDNL 404
Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+ + G+ + + +E L+ +R K F+S+D IR
Sbjct: 405 ARWSQVFGVFYSQPQEFLDELRACRARRKGIDTAKVEALLTQRQEARAGKDFASSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G ++D
Sbjct: 465 ELAAMGAEVKDTPQGQTWD 483
>gi|238926117|ref|ZP_04657877.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
gi|238886007|gb|EEQ49645.1| cysteinyl-tRNA synthetase [Selenomonas flueggei ATCC 43531]
Length = 476
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 242/496 (48%), Gaps = 61/496 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNT+ RK EF + + +Y CG T Y+ HIGNARP + +DV+ R L +
Sbjct: 1 MITVYNTMTRKKEEFHPLREGEVSIYCCGVTPYNDPHIGNARPFVTWDVIRRYLAHKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TD+DDKII A +E + I+ + + L P
Sbjct: 60 -RVRYIQNFTDVDDKIINAANREDVT------WKEISDRYIAAYFTAMDALNVRRADVFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + + +I +I+ +I G+AY ++ + + YG S R +D+ + G RV
Sbjct: 113 RVSETMDDIIRMIETLIERGYAYVTETGDVYYSVEAFAPYGCLSGRSLDDMEAGARVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W+SPWG+GRPGWHIECSAMS YLG+ FD HGGG DLIF
Sbjct: 173 ATKHHPMDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSVKYLGEAFDFHGGGSDLIF 232
Query: 243 PHHENEIAQS-CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENEIAQ+ C D K A W+HNGF+ ++ KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQADPCIDADVKFARYWLHNGFITIDNEKMSKSKNNFFTVKDIL-------KE 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+P VIR +L THYR P+DF+ +RL EA+ L++ + +
Sbjct: 286 YPGEVIRFFILQTHYRSPLDFSDERLQEAQTALARLKGANEVIDELLKREGTADTAADLA 345
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHD---------------LLPIFN 386
+A+ +D NT AI + LA+E + H +
Sbjct: 346 AQSEAFLRDFDAAMDDDFNTALAISQMFGLAKEINRYHQEVERGAVFDAAHFRTAAEAYR 405
Query: 387 ASAHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
A I+GI + + + ++ ++ R K + AD IR L+ G ++E
Sbjct: 406 KMAGIIGIFEQDDAAPADDGLTNAVMDFVISLRQEARAEKNWVLADKIRDGLKEAGVLIE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D RWK+
Sbjct: 466 DTPT------GVRWKR 475
>gi|50084652|ref|YP_046162.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|61216194|sp|Q6FC71|SYC_ACIAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|49530628|emb|CAG68340.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 473
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 186/488 (38%), Positives = 261/488 (53%), Gaps = 57/488 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF P +I MYVCG TVYD+ HIG+AR M+ FD + R LR + V
Sbjct: 6 LYNSEQRKKVEFVPRKPGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWD--V 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + N+ I +TS+ +D +L C P P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANEN------NETIQQLTSRFIDAMNEDAAKLGCAEPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I +M +I ++ G AY +N ++ F+ S YG S RK+++ + RV +
Sbjct: 118 EYIGEMQNMISTLVDKGSAYPASNGDVYFEVSKFEKYGRLSGRKLEDMQAGASERVDIEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL FP
Sbjct: 178 EKKHPFDFVLWKGAKPNEPSWVSPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLTFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + D +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYEQVYGQNDSTQKDEQFIER 349
Query: 355 LY----NDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEV--CKE 399
+D NT AI L +L RE + ILG+ E
Sbjct: 350 FNIAMRDDFNTPEAIAVLFELNRELNRAVKEQQAEQAAIYYVTLRHLTQILGLVQHDVDE 409
Query: 400 HLNKNI--------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L +I I+ ++Q+R K K FS AD IR+ L +G +LED +
Sbjct: 410 FLKSDIGQEVLSLSDDEIQAMIQQRADAKKAKDFSGADAIRQALLDQGVVLEDTR----- 464
Query: 452 QRMTRWKQ 459
+ T W++
Sbjct: 465 -QGTLWRR 471
>gi|159905981|ref|YP_001549643.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|229558715|sp|A9AAN8|SYC_METM6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|159887474|gb|ABX02411.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 476
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 168/494 (34%), Positives = 241/494 (48%), Gaps = 59/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL RK EF+ ++ ++MYVCGPTVYD H+G+ R + FD++ R L +
Sbjct: 1 MLKVYNTLTRKEEEFKPLNEKEVKMYVCGPTVYDHTHLGHGRTYVSFDIIRRYLEHIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+RA + ++ + F+ D T L P
Sbjct: 60 -TVNLVINFTDIDDKIIKRANENG------KNPKELSEQFITVFLNDMTTLKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HIP++I I+ +I G AYE N + F+ NYG S +++ G R+
Sbjct: 113 KVTEHIPEIIAFIEKLIEKGFAYETENGVYFEVKKFENYGKLSNINLEDLFSGVRIETSE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK + P EP W+SP+ GRPGWHIECSAMSS YLG+ FDIHGGG DL FP
Sbjct: 173 EKKNPEDFALWKTAKPGEPKWKSPFVEGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N W+H GF+ + G KMSKS GNF+TI + + +
Sbjct: 233 HHENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTI-------EGISKEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------- 340
++R + HYR PID+T + +T + L K
Sbjct: 285 PEILRFFFIQRHYRSPIDYTAESITHVKNNLEKIYNVIENIRISLEKSEKSRVWGENEVL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNA 387
A+ +D NTV A++++ +++ K L+ F
Sbjct: 345 LYDILKNSKRNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVKTPSEGLLLKAFDFFKI 404
Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ K + I+ L++ R L K + +D IR L++ G+ +ED
Sbjct: 405 VGEIFGLFENYFKTSSESDDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDN 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T +K+
Sbjct: 465 P-----KEGTVFKK 473
>gi|237741373|ref|ZP_04571854.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|294784133|ref|ZP_06749434.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|229430905|gb|EEO41117.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|294488203|gb|EFG35548.1| cysteine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 473
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 266/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT++L +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ VIRL +L +HYR+P++F+ L + + L + T
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
K I+ + A+ D NT A+ + +L + K D + I
Sbjct: 345 LATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLV 404
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MMIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|34762389|ref|ZP_00143391.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887971|gb|EAA25037.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 473
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 178/488 (36%), Positives = 266/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT++L +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ VIRL +L +HYR+P++F+ L + + L + T
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
K I+ + A+ D NT A+ + +L + K D + I
Sbjct: 345 LATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLV 404
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|146328731|ref|YP_001209134.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
gi|166200146|sp|A5EWG6|SYC_DICNV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146232201|gb|ABQ13179.1| cysteinyl-tRNA synthetase class I [Dichelobacter nodosus VCS1703A]
Length = 456
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 174/466 (37%), Positives = 249/466 (53%), Gaps = 35/466 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YN+L R+ F I P+++ MYVCG TVYDF HIG+AR M+VFD + R LR +
Sbjct: 4 LHLYNSLSRQKEPFHPITPNHVMMYVCGMTVYDFCHIGHARVMVVFDTIARHLRASGYQL 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
TYVRNITDIDDKII RA + N+ I +T + +D L CL P+ +P+
Sbjct: 64 --TYVRNITDIDDKIIRRAAEN------NEPIQALTQRFINAMHEDEAALGCLPPSIEPK 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++ +MI +I +I HAY N ++ + S YG + R++++ + G R+
Sbjct: 116 ATEYVAEMIAMIGELIAQNHAYIADNGDVYYSVRSFDEYGKLANRRLEDLRAGERIAINE 175
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K +P DF+LWK++ EP WESPWG GRPGWHIECS MS H LG FDIHGGG+DL FP
Sbjct: 176 AKNDPLDFVLWKKAKTGEPSWESPWGAGRPGWHIECSVMSRHQLGDHFDIHGGGMDLKFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EIAQS + N W+HNGF+N++ KMSKS GNF T+ ++L +++
Sbjct: 236 HHECEIAQSEPVCGGK-HVNYWLHNGFINIDNEKMSKSLGNFFTVRDVL-------KNYA 287
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSAL 355
VIR ML +HYR P++++ L EA+ L + + ++A+
Sbjct: 288 GEVIRFFMLQSHYRGPVNYSDAALEEAKRGLQRLYTALETAPTTGGAILLPYQERFVAAM 347
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEVCK-----EHLNKNI 405
+D NT AI L +LA+ K A LG+ +
Sbjct: 348 DDDFNTPQAIAVLFELAKMLNKAAAAEAADIAFTLRTLAARLGLLTGDAKTLFQQKGALS 407
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ IE + R K +++AD IR++L + G L+D
Sbjct: 408 AAEIEAEIARRQAAKAAKDYATADSIREKLSALGIELKDSATGTQW 453
>gi|282882291|ref|ZP_06290922.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297841|gb|EFA90306.1| cysteine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 467
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 173/483 (35%), Positives = 244/483 (50%), Gaps = 51/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L K EF I+ + MY CGPTVY++ H+GNARP++VFD L R Y +
Sbjct: 1 MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRYFLYKGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
V +V N TDIDDKII RA +E N I K ++F KD + L T P
Sbjct: 60 -VKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+ + QMI IQ +I G AY ++ ++ FD + YG S +KI++ + G+RV
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK EP W++PWG GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + A W+HNG + + KMSKS GNF T+ E+ + +
Sbjct: 233 HHENEIAQSETCNDA-PFARFWLHNGMITVNNEKMSKSKGNFFTVREV-------SKEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
++R +L T YR PI+F+ + + + + L +
Sbjct: 285 LEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERDLTEDEKKI 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAH 390
+ A+ +DLNT AI A+ L ++ N D + +
Sbjct: 345 EEKFQAHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLLKTLTK 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILGI + +E ++ I L++ER K K F AD IR +L KG ++D +
Sbjct: 405 ILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDTRKGIE 463
Query: 451 GQR 453
+R
Sbjct: 464 WKR 466
>gi|237726044|ref|ZP_04556525.1| cysteinyl-tRNA synthetase [Bacteroides sp. D4]
gi|229435852|gb|EEO45929.1| cysteinyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
Length = 493
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 166/498 (33%), Positives = 247/498 (49%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYMNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLSEFFEGSHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPTAQTTGVEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSVFHLFMYEILGLKEETANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNG 451
+L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKDGFTW 489
>gi|256028172|ref|ZP_05442006.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289766105|ref|ZP_06525483.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717660|gb|EFD81672.1| cysteinyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 472
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 264/488 (54%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT++L +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT++I +MI +IQ +I G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PRATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS CA A W+HNG++ + G KMSKS F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKSGS-FVLLRDIL-------KH 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P+DF+ + L + + L + T +D
Sbjct: 284 FEGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQEL 343
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
+ A+ D NT A+ + +L + K D I
Sbjct: 344 LATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLV 403
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
++LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 404 MIIQNVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 463
Query: 445 YKNPDNGQ 452
K+
Sbjct: 464 GKDKTTWT 471
>gi|163783157|ref|ZP_02178151.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881491|gb|EDP75001.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 489
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 164/511 (32%), Positives = 254/511 (49%), Gaps = 77/511 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K+ EF ++P + +Y CG TVYD +H+G+ R +IVFD R L + +
Sbjct: 1 MKIHNTLTGKVEEFVPVNPPKVLIYTCGVTVYDDSHVGHGRSLIVFDTFRRFLEHLGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII RA++E I ++ + +D + +PR
Sbjct: 60 -VTFVRNFTDVDDKIINRAKEECTD------FMTIANRYIASYYRDMEAIRVKPADVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+ +++ +IQ++I G+AYE++ ++ F S +YG S+R +E + G RV
Sbjct: 113 VTEHMKEIVDVIQSLIEKGYAYESDGDVYFSVRSFKDYGKLSKRSPEEMEAGARVEPSEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + EP W+SPWG+GRPGWH EC AM +LG+ DIHGGGLDL+FPH
Sbjct: 173 KRDPLDFALWKSAKAGEPSWDSPWGKGRPGWHTECVAMIFKHLGETIDIHGGGLDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ + A W+HNG + + G+KMSKS GN++T+ E+ +
Sbjct: 233 HENEIAQAEAVTG-KPFARYWMHNGLVTVGGQKMSKSLGNYVTLKEIYT-------KYHP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------ST 342
++RL +L THYR P+DF+ +++ E + +
Sbjct: 285 DILRLLVLFTHYRSPLDFSWEKMEETQRAYDRLKGAIEDYEVLKELEVIPGKGGAHPLYD 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-------------------LP 383
++ + +L +D NT A+ + L E K +
Sbjct: 345 KVKEVEESFFESLSDDFNTPEALSHIFSLVSELGKVKNRTYSEGKIDESELGAYEYASRF 404
Query: 384 IFNASAHILGI--------------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
+ N I G+ E E + ++ L++ R + + K+F AD
Sbjct: 405 LLNTLKKIFGLLEDLYPECEVRRVVERELEAGEVLDTKLVDLLIEVRTLARQEKQFRIAD 464
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR +L+ G LED TRWK++
Sbjct: 465 LIRDRLKELGIELEDT------PAGTRWKKR 489
>gi|19704900|ref|NP_602395.1| cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|22257049|sp|Q8RIK9|SYC_FUSNN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|19712793|gb|AAL93694.1| Cysteinyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 473
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 174/488 (35%), Positives = 264/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
V YV+N TD+DDK+I +A E N +I I + + + +DT+++ +
Sbjct: 60 -KVNYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKINLKEEGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +IQ+++ G+AYE+N ++ F+ + YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIQSLVDKGYAYESNGDVYFEVKKYRDGYGELSKQNIEDLESGARIDV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEIKRDALDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCGCG-GTFAKYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P++F+ L + + L + T +D
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDTELNQTKSSLERIENTLKRIKELDRENIKGIDDCQEL 344
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
+ A+ D NT A+ + +L + K D I
Sbjct: 345 LATKKEMEAKFIEAMNEDFNTAQALGHIFELVKAVNKTLDEANISKKGLEVIDEVYSYLV 404
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIQDVLGVQLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|53719852|ref|YP_108838.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|53723757|ref|YP_103282.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|67642953|ref|ZP_00441703.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|76809388|ref|YP_334067.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121599658|ref|YP_993471.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124385862|ref|YP_001029097.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126441734|ref|YP_001059571.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|126449503|ref|YP_001080979.1| cysteinyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|126452065|ref|YP_001066849.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|134277835|ref|ZP_01764550.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|167001797|ref|ZP_02267589.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|167720284|ref|ZP_02403520.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei DM98]
gi|167739281|ref|ZP_02412055.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 14]
gi|167816497|ref|ZP_02448177.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 91]
gi|167830172|ref|ZP_02461643.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 9]
gi|167846407|ref|ZP_02471915.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|167894988|ref|ZP_02482390.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|167903372|ref|ZP_02490577.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|167916840|ref|ZP_02503931.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 112]
gi|167919625|ref|ZP_02506716.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|217420917|ref|ZP_03452422.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|226198973|ref|ZP_03794536.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237812906|ref|YP_002897357.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|242315930|ref|ZP_04814946.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254178125|ref|ZP_04884780.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254184417|ref|ZP_04891007.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|254191450|ref|ZP_04897954.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254197349|ref|ZP_04903771.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|254200234|ref|ZP_04906600.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254209314|ref|ZP_04915660.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|254258938|ref|ZP_04949992.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|254297083|ref|ZP_04964536.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|254358017|ref|ZP_04974290.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|61216158|sp|Q62J37|SYC_BURMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216161|sp|Q63SS8|SYC_BURPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109894887|sp|Q3JQT6|SYC_BURP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200132|sp|A3ML43|SYC_BURM7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200133|sp|A2SAX8|SYC_BURM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200134|sp|A1V5G8|SYC_BURMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200135|sp|A3NWX8|SYC_BURP0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200136|sp|A3NB50|SYC_BURP6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|52210266|emb|CAH36245.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|52427180|gb|AAU47773.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|76578841|gb|ABA48316.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|121228468|gb|ABM50986.1| cysteinyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124293882|gb|ABN03151.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126221227|gb|ABN84733.1| cysteine--tRNA ligase [Burkholderia pseudomallei 668]
gi|126225707|gb|ABN89247.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|126242373|gb|ABO05466.1| cysteine--tRNA ligase [Burkholderia mallei NCTC 10247]
gi|134251485|gb|EBA51564.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|147749830|gb|EDK56904.1| cysteinyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147750087|gb|EDK57158.1| cysteinyl-tRNA synthetase [Burkholderia mallei JHU]
gi|148027144|gb|EDK85165.1| cysteinyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|157807476|gb|EDO84646.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|157939122|gb|EDO94792.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|160699164|gb|EDP89134.1| cysteinyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|169654090|gb|EDS86783.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|184214948|gb|EDU11991.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|217396329|gb|EEC36346.1| cysteine--tRNA ligase [Burkholderia pseudomallei 576]
gi|225929073|gb|EEH25097.1| cysteine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|237504389|gb|ACQ96707.1| cysteine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|238524180|gb|EEP87614.1| cysteine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|242139169|gb|EES25571.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|243062482|gb|EES44668.1| cysteine--tRNA ligase [Burkholderia mallei PRL-20]
gi|254217627|gb|EET07011.1| cysteine--tRNA ligase [Burkholderia pseudomallei 1710a]
Length = 465
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 246/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R +F P +RMYVCG TVYD+ HIG+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQDFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDIVQRWLRAR 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + T D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIQSLTRRFTDAMNADFDALGVERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +++ + G RV
Sbjct: 112 LEPRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFANYGRLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P EP WES +G GRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPQEPAGASWESKYGAGRPGWHIECSAMGCTLLGAHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 288 ----KFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDAQPLDWSEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------HILG 393
+A+ +D NT A+ L +LA E + + L
Sbjct: 344 HAQRFAAAMNDDFNTAVAVAVLFELATEVNRTREPALARQLRLLAGLLGLLGREPREFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 HAAGAARTGALEPHEIEARIAARVAAKQAKNYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|258404670|ref|YP_003197412.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796897|gb|ACV67834.1| cysteinyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 485
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 250/499 (50%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN++ R+ EF I +YVCG T YD+ HIG+AR +VFDVL R R
Sbjct: 1 MQLYNSMTRQKEEFIPQTSGEISLYVCGITAYDYCHIGHARAAVVFDVLVRYFRDQNF-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN TD+DDKII+RA +EH + K + +D RL +P+
Sbjct: 59 AVHFVRNFTDVDDKIIKRAAEEHLEA------DEVAQKYIAAYYEDMERLGVQPANFEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI MI L +N+I GHAY A+ ++ F S+P+YGS S R++D + G R+
Sbjct: 113 ATEHIQDMIGLAENLIAKGHAYATASGDVYFRVRSLPSYGSLSGRELDTMRAGARIAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWKR+ P EP W SPWG GRPGWH+ECSAMS +LG DIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKRAKPEEPSWPSPWGNGRPGWHLECSAMSERFLGLPLDIHGGGQDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS A E A W+HNGF+ +E KMSKS GNFITI ++L +
Sbjct: 233 HHENERAQSLAASGKE-LARFWVHNGFVQVEAEKMSKSLGNFITIRDILS-------YYL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
V+R ++ HYR P+DF + + EAE L + QT
Sbjct: 285 PEVLRYFLVTKHYRSPLDFNWEVMDEAEKGLRRLYQTRQHIAEALSRSNWSKTELPSELS 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PIF 385
+D + +DLNT A+ + L R + + + IF
Sbjct: 345 AEIDDLDAKWRQNMEDDLNTAGALGHVFTLNRLANRILEDKTWRKAEAGGKLLERIQSIF 404
Query: 386 NASAHILGIEV------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
++LG+ K + A+ +L+ +R + K F++AD +R+
Sbjct: 405 EHIGNVLGLFQQTPDAFLDDLRTQKAKRKGIDTSAVAQLITKRQEARRAKDFTTADSVRQ 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
QLE G ++D
Sbjct: 465 QLEEMGIEVQDTPQGPVWD 483
>gi|58582301|ref|YP_201317.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84624181|ref|YP_451553.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
311018]
gi|81311823|sp|Q5GZD9|SYC_XANOR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109894962|sp|Q2P2E8|SYC_XANOM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|58426895|gb|AAW75932.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae KACC10331]
gi|84368121|dbj|BAE69279.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae MAFF
311018]
Length = 476
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 193/496 (38%), Positives = 264/496 (53%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
P +R A+L HYR+P+D++ + +A L + T ++
Sbjct: 286 KHPPEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKT 345
Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHILGIE------- 395
V SAL +DLNT A+ + +A E+ + L + + +
Sbjct: 346 IPVEVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAG 405
Query: 396 ------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + I LVQER K K F+ AD IRKQL +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|227894572|ref|ZP_04012377.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
gi|227863731|gb|EEJ71152.1| cys-tRNA synthetase [Lactobacillus ultunensis DSM 16047]
Length = 477
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 169/494 (34%), Positives = 248/494 (50%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 5 KVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGY--K 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + K F++DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I ++I ++ +I G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEINEIINFVKVLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDEE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNIDYRLDDNTASEKSS 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNA 387
D ++A+ +D N +A+ A++ L N + A
Sbjct: 349 ELVKAIEDTDQKFIAAMDDDFNVQNALTAVYDLLSVVNANANSKKADKDALKQFEEKLTA 408
Query: 388 SAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G++ K + IE LV++R K ++++D +R QL+ G ++D
Sbjct: 409 WLLIFGVDTNKLCAQNTGSNDDEIEALVKKRDEARANKDWATSDQLRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|163847402|ref|YP_001635446.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222525251|ref|YP_002569722.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
gi|163668691|gb|ABY35057.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222449130|gb|ACM53396.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
Length = 472
Score = 369 bits (948), Expect = e-100, Method: Composition-based stats.
Identities = 173/491 (35%), Positives = 241/491 (49%), Gaps = 57/491 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL R++ + I+P +RMYVCG T YD AHIG+A IVFDV+ R L +
Sbjct: 1 MTIQLYNTLSRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDVIRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++ N TDIDDK+I RA + ++ + +F+ + L T
Sbjct: 61 E--VRHIVNFTDIDDKVIARANA------LGQDPLTLSGQYAAEFLAQLQAMNVLPATAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + +P +I +Q +I G+AY + ++ F +YG S R +DE GTR
Sbjct: 113 PRVSTTMPAIIAFVQGLIERGYAYVVDGDVYFRVRRDEDYGKLSGRSLDEMLSGTRFEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK + P EP WESPWG GRPGWHIECSAM+ +LG DIHGGG DLIF
Sbjct: 173 PRKESPADFALWKAARPGEPSWESPWGPGRPGWHIECSAMAMEHLGPQIDIHGGGTDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR------KMSKSNGNFITINELLETKK 296
PHHENEIAQS + A W+HNG L L KMSKS GN +TI + L
Sbjct: 233 PHHENEIAQSESLTG-QCFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLSR-- 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
+ A V RL +L + YR P+ + + + + L +
Sbjct: 290 -----YDADVFRLIVLSSSYRSPLTYNDEVAADNQRKLERLLSALAPATGTVHEGPAVTA 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
+ + ++A+ ND N+ +A+ AL L R D A
Sbjct: 345 LREAAALARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLDNDALAIGQQTLRELA 404
Query: 390 HILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ + IE L++ R L K K+++ AD +R +L G LED
Sbjct: 405 GVLGLRLQPRQRTTGAEATPFIELLIEVRSELRKAKQYALADMVRNRLSDLGVTLED--- 461
Query: 448 PDNGQRMTRWK 458
G + TRWK
Sbjct: 462 ---GPQGTRWK 469
>gi|147918862|ref|YP_687412.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
gi|110622808|emb|CAJ38086.1| cysteinyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
Length = 473
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 166/483 (34%), Positives = 252/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ YNTL + + +FQ +D ++MYVCGPTVYD+ H+G+AR IVFDV+ R L Y +
Sbjct: 5 SLRFYNTLTQTVEDFQPLDDRKVKMYVCGPTVYDYCHMGHARSYIVFDVIRRHLLYRGYD 64
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV+N TD+DDKI++RA++ +N + ++ K + +D RL + H P
Sbjct: 65 --VTYVQNFTDVDDKILKRAKE------LNVDPTELSRKFIAAYFEDIDRLNVMRADHYP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEK 182
R T + +I +I+ ++ G+AYE+ + F + G S + D K+G R+
Sbjct: 117 RVTEFMDPIIGIIKALVDKGYAYESMGSVYFSIDRMVSEVGVLSHQTYDSLKVGARIEVD 176
Query: 183 YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF+LWK + P E W+SPWG+GRPGWHIEC+AMS LG+ DIHGGG+DLI
Sbjct: 177 ERKRNPMDFVLWKAAKPGESLSWDSPWGKGRPGWHIECTAMSVKLLGEQIDIHGGGMDLI 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE+EI QS A WIHNGFL + KMSKS GNF I ++L +
Sbjct: 237 FPHHESEILQSEAYTGKVPFAKYWIHNGFLLVNKEKMSKSLGNFFLIRDIL-------QK 289
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ +R +L T+Y+ P+DF+ L EA+ L++ T +
Sbjct: 290 YSPETVRFFILNTNYQGPLDFSDAGLEEAKKSLARIQNTVSDITDRAGKTDQKGSDQDIS 349
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHI 391
+ N+ +T AI + + R + + +++ ++I
Sbjct: 350 ALIAESKARFDEHMDNNFSTREAIAEIFEFTRTVNRLLRGSFSADEAKQIAGLYDHFSNI 409
Query: 392 LGIEVCKEHLNKNISIAIEKL-VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
LGI E ++ + KL + R + K K + ++D IR +L+ G LED K
Sbjct: 410 LGIRWETEQKEDMLADELMKLIIDIRAAVRKKKDYETSDLIRSRLKDLGITLEDTKEGVK 469
Query: 451 GQR 453
+R
Sbjct: 470 VKR 472
>gi|186476148|ref|YP_001857618.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|184192607|gb|ACC70572.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 465
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 249/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQNFVPLHEGEVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--KVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIAALHEDADALGIERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT +PQM+ +I+ + +G+AY+ A+ ++ + NYG+ S + +++ + G RV
Sbjct: 112 LEPRATEFVPQMLGMIEKLEANGYAYQAADGDVNYAVRKFENYGALSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK+S P EP GWES +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKQSKPDEPADTGWESKYGRGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS GNF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEGAT-RQTFVNYWMHNGYVQIDNEKMSKSLGNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R + HYR P++++ L +A L++
Sbjct: 288 ----KYDAEVVRFFIARAHYRSPLNYSDVHLDDARGALARLYTALKDTPPQAGEVDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-------------LG 393
+A+ +D NT A+ L +L E + D L
Sbjct: 344 YAQRFRAAMNDDFNTPVAVSVLFELVSEVNRTRDAALARQLHGLGLVLGLLGREPRVYLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ AIE + R+ + K ++ AD IRK+L G LED
Sbjct: 404 QAGASVGEGALDTAAIEAKIAARVAAKQAKDYAEADRIRKELLDAGIALEDKPGGL---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|256846544|ref|ZP_05552001.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256718313|gb|EEU31869.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 473
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 177/488 (36%), Positives = 266/488 (54%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT+++ +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NISIKEIAERYIKAYFEDTSKINLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT +I +MI +I++++ G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PKATENINEMIEIIKSLVDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKKDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSKKYLGDSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS C A W+HNG++N+ G KMSKS+G+F+ + ++L +
Sbjct: 233 FPHHENERAQSKCGCG-GTFARYWMHNGYININGEKMSKSSGSFVLLRDIL-------KY 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------ 343
+ VIRL +L +HYR+P++F+ L + + L + T
Sbjct: 285 FEGRVIRLFVLGSHYRKPMEFSDAELNQTKSSLERIENTLKRIKELDRENIKGIDDCQEL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
K I+ + A+ D NT A+ + +L + K D + I
Sbjct: 345 LATKKEIEAKFIEAMDEDFNTAQALGYIFELVKAVNKTLDEVNISKKGLEVIDEVYSYLV 404
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 405 MIIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 464
Query: 445 YKNPDNGQ 452
K+
Sbjct: 465 GKDKTTWT 472
>gi|219848629|ref|YP_002463062.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219542888|gb|ACL24626.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 472
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 171/491 (34%), Positives = 242/491 (49%), Gaps = 57/491 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNTL R++ + I+P +RMYVCG T YD AHIG+A IVFD++ R L +
Sbjct: 1 MTIHLYNTLTRRLEPLETIEPGVVRMYVCGVTPYDEAHIGHAMSAIVFDMIRRYLEFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V ++ N TDIDDK+I RA+ + ++ + +F+ + L T
Sbjct: 61 Q--VRHIVNFTDIDDKVIARAQA------MGQDPLALSGQYAAEFLTQLQAMNVLPATAY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + +P +I +Q +I G+AY + ++ F +YG S R +DE GTR
Sbjct: 113 PRVSTTMPGIIAFVQGLIERGYAYVVDGDVYFRVKRDEDYGKLSGRSLDEMLSGTRFEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK + P EP W+SPWG GRPGWHIECSAM+ YLG DIHGGG DLIF
Sbjct: 173 PRKESPADFALWKAARPGEPAWDSPWGPGRPGWHIECSAMAMEYLGPQIDIHGGGTDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR------KMSKSNGNFITINELLETKK 296
PHHENEIAQS + A W+HNG L L KMSKS GN +TI + L
Sbjct: 233 PHHENEIAQSESLTG-QPFARYWVHNGMLQLVNPQTRQVEKMSKSLGNVVTIADFLSR-- 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------- 340
+ V RL +L + YR P+ + + + + L +
Sbjct: 290 -----YDPDVFRLIVLSSSYRSPLTYNDEIAADNQRKLERLLSALAPATGSVREGPAVAA 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASA 389
+ I ++A+ ND N+ +A+ AL L R D A
Sbjct: 345 LREAATIARERFITAMDNDFNSPAALAALFDLVRAINAARDAGLAAEELAIGQQTLRELA 404
Query: 390 HILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG ++ + ++ IE L++ R L K K+++ AD +R +L G LED
Sbjct: 405 GVLGLRLQPRQRTPTAEVTPFIELLIEVRGELRKAKQYALADLVRNRLADLGVALED--- 461
Query: 448 PDNGQRMTRWK 458
G TRWK
Sbjct: 462 ---GPHGTRWK 469
>gi|188997490|ref|YP_001931741.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|229558793|sp|B2V6B4|SYC_SULSY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|188932557|gb|ACD67187.1| cysteinyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 487
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 173/508 (34%), Positives = 246/508 (48%), Gaps = 73/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL K +F I P +++Y CG TVYD+ H+G+ R +IVFD++ R LRY
Sbjct: 1 MSLKIYNTLTGKKEDFAPIKPGEVKIYTCGVTVYDYNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA+ E S+I+ K +++ D + +
Sbjct: 61 --NVIFVRNFTDVDDKIINRAKNECL------PFSVISDKFIKEYFDDAEKFRIEPADIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ ++ G+AYEA+ ++ F YG S+R IDE G R+
Sbjct: 113 PRVTTHIPDIINFIQKLVDAGYAYEADGDVYFSVRKFKEYGKLSKRSIDELLAGARIEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK + EP WESPWG+GRPGWH EC AM +LG+ DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKSAKAGEPYWESPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A WIHNG + + G+KMSKS GN+I + E+ +
Sbjct: 233 PHHENEIAQAEALTG-KPFARYWIHNGLVTVNGQKMSKSLGNYIKLKEIYS-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------ 356
++RL +L HYR P+DF+ ++ E + + +++ + +
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWDKMEETKKAYERLKNAIEEAEVLNKLPIDENFEGDLYN 344
Query: 357 --------------NDLNTVSAIQALHKLAREST------------------KNHDLLPI 384
+D NT A+ +L L RE +
Sbjct: 345 AIQKAQSGFYSAMSDDFNTPEALASLFGLVREMNILRDKAIKHGGISKKAIESYKEAAKT 404
Query: 385 FNASA-HILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ I G+ + I+ L++ R K K+F+ AD I
Sbjct: 405 LHDIGRDIFGLFDSLQPCIKQEEVKVKEKEESINEDLIQVLIEAREKARKEKQFTIADLI 464
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R +L KG ILED T+WK+
Sbjct: 465 RDKLAEKGIILED------APFGTKWKK 486
>gi|255318181|ref|ZP_05359420.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379610|ref|ZP_06072766.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304727|gb|EET83905.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262299067|gb|EEY86980.1| cysteinyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 473
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 189/488 (38%), Positives = 262/488 (53%), Gaps = 57/488 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR E V
Sbjct: 6 LYNSEQRKKVEFVPRKAGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGWE--V 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITDIDDKII+RA + + I +T + Q +D RL CLAP PRAT
Sbjct: 64 KYVRNITDIDDKIIKRANENG------ETIQALTDRFIQAMNEDAHRLGCLAPDEAPRAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I ++ +G AY N ++ F YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGKLVDNGSAYPATNGDVYFQVEQFNKYGRLSGRKLDDMQAGASDRVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG+GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 DKKHPFDFVLWKHAKENEPFWNSPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLLFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEAATG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------TSKGIIDPA 350
VIR ++ +HYR P++F+ L EA+ L+++ I
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALTRFYHAFKAYQQQFNEELTDHFSQIHLER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCK--- 398
+A+ +D NT A+ L +LA+E + +ILG+
Sbjct: 350 FNAAMCDDFNTAEAMAVLFELAKELNRALKEENAEQAKVFYSTLRHLTNILGLVQHNVDD 409
Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ IE+L+Q+R+ K K F+ AD IR+ L ++G +LED +
Sbjct: 410 FLRSDIGQEALGLSESEIEELIQQRVDAKKAKDFTKADSIRQNLLNQGVVLEDTR----- 464
Query: 452 QRMTRWKQ 459
+ T W++
Sbjct: 465 -QGTLWRR 471
>gi|126462148|ref|YP_001043262.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
gi|187630855|sp|A3PJH4|SYC_RHOS1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126103812|gb|ABN76490.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17029]
Length = 486
Score = 369 bits (947), Expect = e-100, Method: Composition-based stats.
Identities = 204/482 (42%), Positives = 271/482 (56%), Gaps = 41/482 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R+ F+ ID N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3 EIRLTNTKTRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A + + I T + + + +D L L PT
Sbjct: 63 SHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+PRAT I MI +I+++I GHAYE ++F S +YG+ S R +D+ G RV
Sbjct: 123 HEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGIDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA A +W+HN L ++GRKMSKS GNF TI++L + R
Sbjct: 243 QFPHHENEIAQSCCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTIHDLRKD-----R 297
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYN 357
P VIR+ +L THY +P+D+T ++ +A+ L KW + + G D AVL+AL +
Sbjct: 298 GIPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTADVEPAGSPDAAVLAALAD 357
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK----------EHLNKNIS- 406
DLNT +AI LH +A + + ASA +LG+ + I
Sbjct: 358 DLNTPAAITRLHSIA-----AQEDGALLKASASLLGLLEDDLRGWTLPPAIATASNVIEV 412
Query: 407 --------------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
IE+L+ ER K F +D IR L G I++D
Sbjct: 413 SGSATAIVGTVPYRKTIERLLDERKQARLGKDFKRSDAIRDLLVGAGVIIKDTPAGAEWD 472
Query: 453 RM 454
Sbjct: 473 LG 474
>gi|262276150|ref|ZP_06053959.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
gi|262219958|gb|EEY71274.1| cysteinyl-tRNA synthetase [Grimontia hollisae CIP 101886]
Length = 461
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 170/496 (34%), Positives = 248/496 (50%), Gaps = 74/496 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L ++ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTKQKEEFKPIHPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCEALTERLIGEMYADFDALNMKRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY +N +++F+ + YG SR+ +++ + G RV +
Sbjct: 113 RATQYIAEIIALVERLIDRGFAYVASNGDVLFEVAKFDEYGKLSRQDLEQLQAGARVDVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 EAKKSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGNHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A + + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARASMERLYTSLRGLDTSVAAEGGEAFVERFKA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + L A +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKAEDVAAASKLAARMRELAEVLGLLEQDPEAFLKG 404
Query: 402 ----NKNISIAIEKLVQERLILL-------------KMKKFSSADYIRKQLESKGFILED 444
+ IE L++ R + + G +LED
Sbjct: 405 NTEGGDDEVAEIEALIKARNDARANKDWAAADAARDAL-------------TAMGIVLED 451
Query: 445 YKNPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ------GAQGTTWRRK 461
>gi|113477437|ref|YP_723498.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
gi|123160290|sp|Q10XJ9|SYC_TRIEI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110168485|gb|ABG53025.1| cysteinyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 489
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 175/508 (34%), Positives = 259/508 (50%), Gaps = 71/508 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YN+L R+ F+ ++P+ I+MYVCG TVYD+ H+G+AR I +D + R L +
Sbjct: 1 MALKLYNSLTRQEETFEPLEPNIIKMYVCGVTVYDYCHLGHARSYIAWDTMRRYLIWQGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N TDIDDKI++RAR+ S + + + T+ + +D RL L
Sbjct: 61 Q--VRYVQNFTDIDDKILKRARETGSS------MDSVAKRFTEAYFEDMKRLNVLEADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +I ++ LI ++ G AY + ++ + YG S R+++E + G
Sbjct: 113 PRATQNIDRIQNLIHDLEKKGFAYSSGGDVYYQVREFSQYGKLSGRRLEEMQAGASGRVD 172
Query: 183 YHK------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K+P DF LWK + EP W+SPWG+GRPGWHIECSAM LG+ DIH G
Sbjct: 173 SEDLETAKKKDPFDFALWKAAKTGEPAWDSPWGKGRPGWHIECSAMVQDCLGETIDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + + A W+HNGF+ + G KMSKS GNF TI +LL+
Sbjct: 233 GADLIFPHHENEIAQSEASTG-KILARYWLHNGFVTINGEKMSKSLGNFTTIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------TSTS 343
+ +R+ +L YR+PIDFT + + A+ + +
Sbjct: 289 ---QPVDPMALRMFVLTAQYRKPIDFTEEAIASAKNGWNTIKEGILFPYQYGPKLGWEMP 345
Query: 344 KGIIDPAVL----------SALYNDLNTVSAIQALHKLARESTKNHDLL----------- 382
+ L A+ +D+NT +A+ L +LA++ + ++L
Sbjct: 346 AKNLSDQTLLLTSYLEKFQKAMDDDINTPAALAILFELAKDLRREGNVLIHEGKTETSLE 405
Query: 383 ------PIFNASAHILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYI 431
+ + +LG+EV E NIS IE L+Q+RL K K +S AD I
Sbjct: 406 ELKKQWVTLVSLSQVLGLEVKIEEQVSNISEGLSNIEIESLIQQRLEAKKAKNYSEADRI 465
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R +L+S+G L D T W +
Sbjct: 466 RNELQSQGIKLIDKSGGL-----TNWHR 488
>gi|269140042|ref|YP_003296743.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|267985703|gb|ACY85532.1| cysteinyl-tRNA synthetase [Edwardsiella tarda EIB202]
gi|304559869|gb|ADM42533.1| Cysteinyl-tRNA synthetase [Edwardsiella tarda FL6-60]
Length = 461
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 174/483 (36%), Positives = 253/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII+RA + ++ +T + + +D L P +P
Sbjct: 60 -RLKYVRNVTDVDDKIIKRALENK------ESCEQLTERMLAEMHRDFDALNIARPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I HAY +N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHDGA-YVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDAAAQPAADETFTARFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + L AH+LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKGEDMAQASALAAQMRGLAHVLGLLEQTPEHFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K ++ AD R L + G +LED G + T W
Sbjct: 405 GAAAGDDEVAQIEALIKQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|282163962|ref|YP_003356347.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
gi|282156276|dbj|BAI61364.1| cysteinyl-tRNA synthetase [Methanocella paludicola SANAE]
Length = 471
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 164/485 (33%), Positives = 247/485 (50%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ YNTL K+ +F + ++MYVCGPTVYD+ H+G+AR +VFD + R L+Y
Sbjct: 1 MALRFYNTLASKVEDFVPLHDMEVKMYVCGPTVYDYCHMGHARAYVVFDTIRRYLQYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+N TD+DDKI++RA ++ N + K + +D RL L +
Sbjct: 61 --KVTYVQNFTDVDDKILKRAAEQ------NVPPKELAEKFINAYFEDMDRLNILRADYY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPE 181
PR + ++P +I +I+ ++ G+AY ++ + F S+ G+ S + D K+G RV
Sbjct: 113 PRVSQNLPAIIDMIKALVDKGYAYVSDGSVYFSVDSMSEKVGALSHQSYDALKVGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK S P E WESPWG GRPGWHIECSAMS LG DIHGGGLDL
Sbjct: 173 DERKRNPMDFALWKASKPGEIISWESPWGPGRPGWHIECSAMSMTTLGPNIDIHGGGLDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHE+EI Q+ A WIHNGFL + KMSKS GNF + ++L +
Sbjct: 233 VFPHHESEIMQTEAYTGKPPFAKYWIHNGFLLVNKEKMSKSLGNFFLVRDVL-------K 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
+ +R +L THY+ P+DF Q L +A L +
Sbjct: 286 KFSPDTVRFFILNTHYQSPLDFNDQALEDASRGLERIKNAISGIEARIRSPLAGAASIPG 345
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
+ ++L+T A+ + +L R+ + ++L ++
Sbjct: 346 VPERLSESKKRFEERMDDNLDTREALAEIFELTRDVNRWLAEGDMPADQWKEVLDLYGIY 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LGI+ + S ++ +V R + K K + ++D IRK+L+ G +ED K
Sbjct: 406 SDVLGIKWTGSMEDLFASELLQLIVDIRDAVRKKKDYETSDLIRKRLKELGITIEDSKEG 465
Query: 449 DNGQR 453
+R
Sbjct: 466 TKIKR 470
>gi|300362340|ref|ZP_07058516.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
gi|300353331|gb|EFJ69203.1| cysteine--tRNA ligase [Lactobacillus gasseri JV-V03]
Length = 472
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 164/495 (33%), Positives = 251/495 (50%), Gaps = 62/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL R+ EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y
Sbjct: 1 MIMKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I AR+EH ++ + ++ + F++DT L T
Sbjct: 61 D--VKYVSNFTDVDDKMINEARKEHTTVG------ELANRYIKAFMEDTEALNIEPATLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 PRATHEIKEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHIN 172
Query: 183 YHKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++N DF LWK E W+SPWG+GRPGWHIECS MS+ YLG+ DIHGGG
Sbjct: 173 EEEQNKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGETIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 QDLEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 289 ----KEIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLADEQEPL 344
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN--------- 386
+ A+ +D N +A+ ++ LA + +
Sbjct: 345 EDNTLRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLASNLNTHLQKDQVDKPALKKAKKL 404
Query: 387 --ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
I G+ ++ + IE +V +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 LLDWLEIFGVSFNEKQA--DDDDEIEAMVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 463 T------PQGTRWHR 471
>gi|296268495|ref|YP_003651127.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296091282|gb|ADG87234.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 464
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 167/484 (34%), Positives = 249/484 (51%), Gaps = 51/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + EF I+P + +Y+CG TV HIG+ R + FDVL R L
Sbjct: 1 MSLHLYDTSTRTVREFVPINPGRVSIYLCGATVQAPPHIGHIRCGVAFDVLRRWLMRLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+ RN+TD+DDKII+ A +E ++ +N + F +L CL PT +
Sbjct: 61 D--VTFCRNVTDLDDKIIKVAAEEGV------PWFVVAERNQRLFTWAYDQLGCLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRA HIP+MI LI+ ++ GHAY A N++ FD S YG S ++++ +
Sbjct: 113 PRAMGHIPEMIELIKRLLDKGHAYVAGNDVYFDVRSFADRYGRLSNQRLEHMRPAGDTEN 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG+ FDIHGGG+DLI
Sbjct: 173 ESLKRDPRDFALWKGAKPGEPSWPTPWGRGRPGWHLECSAMATKYLGETFDIHGGGVDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNG L + G KMSKS GN + I+E+L R
Sbjct: 233 FPHHENEIAQSQAAGDG--FARYWVHNGLLKVGGEKMSKSLGNSLLISEIL-------RK 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAV 351
+R ++ HYR +D++ + L EA + +
Sbjct: 284 VRPIELRYYLVAAHYRSELDYSEEALKEAAAAFRRIEGFVNRAAEMIHDVDAAAPLPQPF 343
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL- 401
+ A+ +DLN A+ +H++ RE LL +LG++ E
Sbjct: 344 VDAMNDDLNVPQALAVVHEVVREGNIAISQVNKEQVARLLAETQNMLDVLGLDPRAEPWR 403
Query: 402 -------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + + +++R K +++AD IR +L + G ++ED +
Sbjct: 404 SRNGSAMREVVDALVSIALEQRQAARARKDYATADAIRDRLAAAGIVVEDT------PQG 457
Query: 455 TRWK 458
TRW+
Sbjct: 458 TRWE 461
>gi|115480611|ref|NP_001063899.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|113632132|dbj|BAF25813.1| Os09g0556500 [Oryza sativa Japonica Group]
gi|125606594|gb|EAZ45630.1| hypothetical protein OsJ_30298 [Oryza sativa Japonica Group]
Length = 569
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 184/511 (36%), Positives = 264/511 (51%), Gaps = 80/511 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YNT R+ FQ P + MYVCG T YD +HIG+AR + FDVLYR LRY
Sbjct: 70 RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRN TDIDDKII RA Q + + ++ + + F+ D L CL P+
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PR ++HI Q+I +I+ II + AY ++ F + P YG S RK+D+ + G RV
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + + N WIHNGF+N+ +KMSKS GNF+TI ++ E
Sbjct: 302 FPHHENEIAQSRAAC-CDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL------- 353
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------- 354
+ +R+ +L THYR PI++T++ + + + T + + +
Sbjct: 354 YHPLALRMFLLGTHYRSPINYTIE---QLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410
Query: 355 -------------------LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
+ +DL+T A+ A+ + + K L +
Sbjct: 411 LPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLS 470
Query: 387 AS-------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSS 427
A +LG+ E ++ K + + + ++ER K K++
Sbjct: 471 AMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEK 530
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+D IRK+L + G L D + T W+
Sbjct: 531 SDEIRKELAAVGIALMDGPD------GTTWR 555
>gi|293390637|ref|ZP_06634971.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
gi|290951171|gb|EFE01290.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D7S-1]
Length = 469
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 180/493 (36%), Positives = 254/493 (51%), Gaps = 68/493 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL R+ F+ I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 10 NMLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ TYVRNITD+DDKII+RA + + + + + KD L L P +
Sbjct: 70 DL--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDFE 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HIP++I +++ +I GHAY N +++FD S +YG SR+ +++ + G R+
Sbjct: 122 PRATHHIPEIIDIVEKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEI 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S LG+ FDIHGGG DL+
Sbjct: 182 NEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLM 241
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 242 FPHHENEIAQSCCAHGNQ-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NH 293
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVL 352
+ A +R +L HYR ++++ + L A L + A
Sbjct: 294 YDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGIDKSAVAFGGENFVDAFR 353
Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 354 EAMDDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQ 413
Query: 401 --LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKN 447
++ IE L+++R + L G ILED N
Sbjct: 414 AGSDEGEVAKIEALIKQRNEARTAKDWAAADAARN-----------ALTKMGIILEDGPN 462
Query: 448 PDNGQRMTRWKQK 460
T W+++
Sbjct: 463 ------GTTWRKQ 469
>gi|237743811|ref|ZP_04574292.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|229432842|gb|EEO43054.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 7_1]
Length = 472
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 263/488 (53%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT++L +
Sbjct: 60 -KVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT++I +MI +IQ +I G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PRATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS CA A W+HNG++ + G KMSKS F+ + ++L +
Sbjct: 233 FPHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKSGS-FVLLRDIL-------KH 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P+DF+ + L + + L + T +D
Sbjct: 284 FEGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQEL 343
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
+ A+ D NT A+ + +L + K D I
Sbjct: 344 LATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKEGLEVIDEVYSYLV 403
Query: 390 ----HILGIEV-CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ K +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 404 MIIQDVLGVKLKLKVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 463
Query: 445 YKNPDNGQ 452
K+
Sbjct: 464 GKDKTTWT 471
>gi|187479046|ref|YP_787070.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
gi|109894885|sp|Q2KX38|SYC_BORA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|115423632|emb|CAJ50172.1| cysteinyl-tRNA synthetase [Bordetella avium 197N]
Length = 483
Score = 369 bits (946), Expect = e-100, Method: Composition-based stats.
Identities = 170/496 (34%), Positives = 244/496 (49%), Gaps = 54/496 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F+ + +R+YVCG TVYD+ H+G+AR ++ FDV+ R LR
Sbjct: 1 MLHIYNTLSRTKETFKPVHAGEVRIYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA Q + +T D LA P H+P
Sbjct: 60 -AVNYVRNITDIDDKIIRRAVQTG------RRMHEVTDYFIAAMHADERALAVERPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +MI +I + +G AY+ + ++ + YG S + +D+ + G RV
Sbjct: 113 RATAYVGEMIDIIGRLEKNGLAYQADDGDVNYAVRGFQGYGKLSGKSLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP W+SP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SSKRDPLDFVLWKSAKEEEPPETKWDSPYGFGRPGWHIECSAMSKSLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A ANIW+H G L ++ KMSKS GNF TI + + +
Sbjct: 233 LKFPHHENEIAQTEGAFG-GTLANIWMHCGPLMVDAEKMSKSLGNFRTIRQTIAQGEAQD 291
Query: 300 RSWP-------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
A ++R ++ HYR P ++T L +A+ L + Q
Sbjct: 292 GEADYQANPREAEMLRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALANVTPDVAGID 351
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCK-- 398
A +A+ +D N+ A+ AL +LA + + D A +LG+
Sbjct: 352 WNEAQAQAFKAAMNDDFNSSGAVAALFELAGQVNRERDSRAAGQLKALGAVLGLLQQDPA 411
Query: 399 ---------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ ++ + IE L+ ER + F+ AD IR +L + G L+
Sbjct: 412 VYFQSSTRYSSAGMQQGASQMDAARIEALIAERGQAKLSRDFARADAIRAELRAAGIELD 471
Query: 444 DYKNPDNGQRMTRWKQ 459
D T+W++
Sbjct: 472 DKPGGM-----TQWRR 482
>gi|58336686|ref|YP_193271.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
gi|227903247|ref|ZP_04021052.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
gi|81311530|sp|Q5FM34|SYC_LACAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|58254003|gb|AAV42240.1| cys-tRNA synthetase cycrs [Lactobacillus acidophilus NCFM]
gi|227869052|gb|EEJ76473.1| cys-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
Length = 477
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 170/494 (34%), Positives = 252/494 (51%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IYNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 5 RIYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGYQ-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + K F++DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEKITVP------ELAEKFINAFLEDTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I +I ++ +I G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEIKDIINFVKVLIDKGYAYEVDGDVYYRAKKFQHYGELSDQNIEQLEEGASEHINDEE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QNRKEDPIDFALWKAQKGPDEIAWDSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTD-QKFVNYWMHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
R V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -RKIDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRIADDTPTKTSE 348
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASAH- 390
+ ++A+ +D N +A+ +++ L A + D L +F
Sbjct: 349 DLVKAINETEEKFVAAMDDDFNVQNALTSIYDLLPVVNANANSDNVDKDALKLFEEKLAA 408
Query: 391 ---ILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G+++ K + IE+LV +R K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGVDIKKLCAQTTGSNDEEIEELVSKRDEARNNKDWATSDQIRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|116493238|ref|YP_804973.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
gi|122265298|sp|Q03E41|SYC_PEDPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116103388|gb|ABJ68531.1| cysteinyl-tRNA synthetase [Pediococcus pentosaceus ATCC 25745]
Length = 470
Score = 368 bits (945), Expect = e-100, Method: Composition-based stats.
Identities = 166/493 (33%), Positives = 247/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNT+ R F+ + + MYVCGPTVY++ HIGNAR +I FD + R Y E
Sbjct: 1 MIKIYNTMSRTKETFKPLVDHKVSMYVCGPTVYNYIHIGNARSIIAFDTIRRYFEYRGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDK+I AR++ ++P + + F +D + T P
Sbjct: 61 --VKFVSNFTDVDDKMINSAREQGITVP------ELADRYIGAFKEDVQAVNVEPATLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +I I +++ G AY + ++ + YG+ S + IDE + G
Sbjct: 113 RATENIDDIIAFIADLMDKGFAYAVDGDVYYRARKFSKYGALSHQNIDELEQGASQHVDD 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + E W++PWG GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETARKEDPIDFALWKAAKGDEIAWKAPWGTGRPGWHIECSVMSTKYLGDTFDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ A W+HNGF+ + + KMSKS GNF+T+++L+
Sbjct: 233 LQFPHHENEIAQSEAKTG-KQFARYWMHNGFVTVGDDNEKMSKSLGNFVTVHDLV----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R M T YR PI +T L +A+ L K +
Sbjct: 287 --QKINPQVLRFLMSTTQYRRPIQYTQASLQDAKNNLEKLQNAFINLNYRLQGAQGAADA 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ ++A+ +D N + I +++ AR + LL +
Sbjct: 345 TVAEQAAQLETDFITAMDDDFNAQNGITVVYEFARLINVYSEKTAVNAEQINQLLTSYAK 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
A + GIE+ + +N I++LV++R + F ++D +R QL+ G ILED
Sbjct: 405 MAAVFGIELKQ---IENDDAEIDELVKQRDQARADRDFETSDRLRNQLKEMGVILEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 460 ----PQGTRWRKK 468
>gi|319407042|emb|CBI80679.1| Cysteinyl-tRNA synthetase [Bartonella sp. 1-1C]
Length = 502
Score = 368 bits (945), Expect = e-99, Method: Composition-based stats.
Identities = 217/503 (43%), Positives = 293/503 (58%), Gaps = 51/503 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ YNTL R+ +F ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3 ELRFYNTLTRRKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITD+DDKI +A ++P + +NDAI +T + QF +DT L CL PT QP
Sbjct: 63 NHVIYVRNITDVDDKINAKAALQYPDLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ ++ +LI+ ++ GHAY A+N I+F P YG F++R +DE + G R+
Sbjct: 123 RATDHLEEIRFLIERLLEKGHAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARID 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIEC--------------SAMS 223
+KK DF+LWK S EPGW SP G GRPGWHIEC +
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWISPAGISVLGRPGWHIECSAMSMAKLLSPYGGGFIC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+FDIHGGG+DLIFPHHENEIAQSC E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSVFGTERMANFWMHNGFLQVEGKKMSKSLG 302
Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NFITI LLE F R W IR +ML THYREP+++T+QRL ++ L
Sbjct: 303 NFITIRSLLENDFFEFADILSAEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSSEL 362
Query: 335 SKWP-------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+W +D +++ L NDLNT + I L K +E
Sbjct: 363 YRWYELLRSERCCLDDNQTVDSSLIKTLSNDLNTSNTITILRKFYKEHNII-----ALAH 417
Query: 388 SAHILGIEVCKEHLNKNIS----------IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
LG+ + K I++ + ERL L+ K++ +AD IR +L +
Sbjct: 418 GMDFLGLLRQELVKEKECPLFVGKTHLNLQFIDQRIAERLALIHNKEWEAADKIRGELAA 477
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G L+D K+P G+R+T W+ K
Sbjct: 478 EGIFLKDSKDPQTGERITTWEMK 500
>gi|71083835|ref|YP_266555.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|109894918|sp|Q4FLI7|SYC_PELUB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71062948|gb|AAZ21951.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
Length = 453
Score = 368 bits (945), Expect = 1e-99, Method: Composition-based stats.
Identities = 188/472 (39%), Positives = 274/472 (58%), Gaps = 31/472 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K I + N L K +F I+ NI MYVCGPTVYD HIGNARP+++FD+L+++L+
Sbjct: 1 MNKDIFLTNNLNNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y+RNITD+DDKII+ A+++ N +IS +T+ + F D L P+
Sbjct: 61 YGHDKINYIRNITDVDDKIIKSAKEK------NLSISELTNNVIKDFNDDCNYLNLDNPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
QP+AT+HI MI +I +I AY N+ + F+ S +YG S +K+++ G+RV
Sbjct: 115 QQPKATDHIDLMIKMISTLIEKDFAYVVNDHVYFEVSKFDDYGKLSNKKLEDLIAGSRVE 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+KK DF+LWK S EP W+SPWG+GRPGWH+ECSAMS YLG VFDIHGGG+DL
Sbjct: 175 VSDNKKKSEDFVLWKPSKDDEPSWDSPWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA+ + AN WIHN F+ + KM+KS GN + I + +
Sbjct: 235 IFPHHENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKDNV----- 289
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLSALYN 357
V++LA++ HY++P+D+ + L + + + KW + +D +LS LY+
Sbjct: 290 --DGQVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYD 347
Query: 358 DLNTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEV--------CKEHLNKNISIA 408
DLNT I LH+L ++ K ++ +F + + +GI K+ +
Sbjct: 348 DLNTPGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDD 407
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I +++ R + K + AD IR +L KG ++ED K+ T WK K
Sbjct: 408 ILEMISLRNKAREDKNYKEADIIRNKLLDKGVLIED-KDGK-----TIWKLK 453
>gi|227501071|ref|ZP_03931120.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
gi|227216844|gb|EEI82242.1| cysteine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
Length = 471
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 169/486 (34%), Positives = 246/486 (50%), Gaps = 55/486 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF ID + I+MYVCGPTVYD+ HIGNARP++VFD L R + + +
Sbjct: 1 MKIHNTLTRQKEEFIPIDENKIKMYVCGPTVYDYMHIGNARPLVVFDTLRRYMNFRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII ++ E S +T K +++D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKSIAEGIST------KEVTDKYIAAYMEDAKDLNIDEENTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT + +I ++ +I G AYE+ ++ FD S +YG S + I++ G
Sbjct: 113 RATEVMDDIIAFVKGLIDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDR 172
Query: 184 HKKNPA----DFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF LWK++ E W+SPWG GRPGWHIECS MS LG DIH GG
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGDGRPGWHIECSTMSKKILGDTIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS + +K AN W+HNG + ++G KMSKS GNF T++++
Sbjct: 233 DLEFPHHENEIAQSEGLNG-KKFANYWMHNGMIQVDGSKMSKSLGNFFTLHDI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------- 349
+ + VIR +L T+YR+PI+FT + + +A L + +
Sbjct: 285 KKEYDLSVIRFWLLTTNYRQPINFTKEIINQANSSLQRLTNAYFRLEDLKKSQAEKSQTI 344
Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFN 386
+ + +DLNT AI L +A+ D ++
Sbjct: 345 NQDLIRELDSFKNKFIEVMDDDLNTADAITVLFDIAKFINTKIDENSDKDLVNKTFDLYK 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ LG+ K+ N ++ IE+L+ +R K K F++AD IR +L G ++D +
Sbjct: 405 SLFDTLGLLAKKKEDNVDV-AKIEELIAKRSEAKKAKDFATADAIRDELSHMGITIKDTR 463
Query: 447 NPDNGQ 452
+
Sbjct: 464 EGVKWE 469
>gi|282897582|ref|ZP_06305582.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
gi|281197505|gb|EFA72401.1| Cysteinyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
Length = 488
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 179/506 (35%), Positives = 253/506 (50%), Gaps = 69/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R EFQ ++P +RMY CG TVYD+ H+G+AR IV+DV+ R L +
Sbjct: 1 MTLSIYNTLTRCQEEFQPVEPGQVRMYYCGVTVYDYCHLGHARACIVWDVVRRYLEFIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDKI+ RAR+E N + + + Q + +D RL
Sbjct: 61 --RVRYIQNFTDIDDKILNRARKE------NSTMETVAERYIQAYFEDMGRLGVREADEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LIQ++ + G+AY A+ ++ + + YG S RK+ + + G
Sbjct: 113 PRATHTMNGIKKLIQDLEVRGYAYAADGDVYYAVRNFNEYGKLSGRKLADLQAGASERVN 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF LWK + P EP WESPWG+GRPGWHIECSAM LG DIH G
Sbjct: 173 IEDPEYQKKKDPFDFALWKAAKPCEPAWESPWGKGRPGWHIECSAMVRDRLGDTIDIHAG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + AN W+HNG + ++G KMSKS GNF TI +LL+
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
R +RL +LM YR+P+DFT + + A Q
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPLDFTEEAILAATNGWHTLKEGLLFGYHHGGKLDWDLQ 345
Query: 340 TSTSKGIIDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLL------------- 382
++ ID + +D N + + ++A+E K +++
Sbjct: 346 STNEITDIDQVEIEKFTTAVDDDFNFPGGLVVIFEIAKELRKEGNIIVHEGKTQTPSAEL 405
Query: 383 ----PIFNASAHILGI----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+LG+ E K IE LVQ+R K K F+ +D IR++
Sbjct: 406 LTKWQTLVTLTRVLGLIAKPEDQKTIDESLSDKVIENLVQKRQEARKAKDFAESDRIREE 465
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQK 460
L++KG L D K TRW+++
Sbjct: 466 LKAKGITLIDSK------EGTRWQRE 485
>gi|114765791|ref|ZP_01444886.1| cysteinyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
gi|114541898|gb|EAU44934.1| cysteinyl-tRNA synthetase [Roseovarius sp. HTCC2601]
Length = 461
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 210/459 (45%), Positives = 271/459 (59%), Gaps = 14/459 (3%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I + N+ RK F+ IDP N+R+YVCGPTVYD AH+GNARP IVFDVL+RL+R
Sbjct: 1 MDVPIWLTNSRTRKKELFEPIDPDNVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMRQV 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + VTYVRN TD+DDKI RA+ S I IT++ TQ ++ D + + PT
Sbjct: 61 YGPEHVTYVRNFTDVDDKINARAQASGRS------IGEITAETTQWYLDDMAAVGVMEPT 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H PRAT I QMI +I ++I GHAYEA ++F S YG S R +D+ G RV
Sbjct: 115 HMPRATEFIDQMIAMIADLIEKGHAYEAEGHVLFAVESYKAYGGLSGRSVDDMIAGARVE 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S P PGWESPWGRGRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 175 VAPYKRNPMDFVLWKPSEPELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHGGGNDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA A +W+HN L +EG+KMSKS GNF T+++LLE + G
Sbjct: 235 MFPHHENEIAQSCCAHPEGGFAKVWLHNEMLQVEGKKMSKSLGNFFTVHDLLEG-RDGQA 293
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---LSALYN 357
P VIR ML THYR+P+D+T ++ ++AE L KW T + ++AL +
Sbjct: 294 GVPGEVIRFVMLSTHYRKPMDWTAEKASQAEATLKKWYAQITEALDNEVPYVGVVNALAD 353
Query: 358 DLNTVSAIQALHK--LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
DLNT AI +H+ LA ++ L + H GI + ++S +KL
Sbjct: 354 DLNTAKAIAEMHQLSLAGDTPSLRASLKLLGFLDH--GIPDWARGPDFDLSELADKLAAV 411
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R ++ K FS D ++ L G + K
Sbjct: 412 RGAAMESKDFSEVDRMKAALLEAGVEVRMSKAGVELLPG 450
>gi|37520420|ref|NP_923797.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|61216274|sp|Q7NMB5|SYC_GLOVI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|35211414|dbj|BAC88792.1| cysteinyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
Length = 482
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 164/499 (32%), Positives = 238/499 (47%), Gaps = 64/499 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R+ F ++ ++MYVCG TVYD+ H+G+ R +V+D + R L
Sbjct: 1 MALQIYNTLTRRKEPFVPLEAGTVKMYVCGVTVYDYCHLGHGRTYVVWDTVRRYLISRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+N TD+DDKI+ RA+QE + + + K + +D RL L
Sbjct: 61 --AVTYVQNFTDVDDKILRRAQQEGTT------MEAVAEKYIAAYFEDMDRLNVLRADSY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +P++ LI + G+AY A ++ + YG S +++ E + G +
Sbjct: 113 PRATQTMPEIGALIDRLTSIGYAYPAAGDVYYSVRRFAEYGKLSGKRLAELEAGASERLQ 172
Query: 183 Y----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
KK+P DF LWK + P EP W+SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 DEELARKKDPFDFALWKGAKPGEPAWDSPWGAGRPGWHIECSAMVRKSLGETIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLE 293
DL FPHHENEIAQS + A W+HN FLN+ KMSKS GNF T+ +L E
Sbjct: 233 DLQFPHHENEIAQSEAVTG-KPLARYWMHNAFLNVVNSSGAEEKMSKSLGNFKTLRDLFE 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
+P +RL +L T YR PI F+ + +E + + G I
Sbjct: 292 V-------FPPMALRLFLLKTSYRNPIAFSAEAFKGSEQNWRELEEVLQLAGWIAGQGRP 344
Query: 349 -----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL--------------- 382
A+ +D NT +A+ + L ++ +
Sbjct: 345 ATDDIESEPWVRRFNEAMDDDFNTAAALAEVIALGKQLAGRYHAAIHGTPLADPARFARE 404
Query: 383 -PIFNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F ILG++ + ++ IE + R + + ++ AD IRKQL +G
Sbjct: 405 WRTFALLCDILGLKAAEPEARQSALPEAEIEAQIALRRQAREERNWAEADRIRKQLLDQG 464
Query: 440 FILEDYKNPDNGQRMTRWK 458
+L D+K T W+
Sbjct: 465 IVLIDHKEKP-----TTWR 478
>gi|125564667|gb|EAZ10047.1| hypothetical protein OsI_32351 [Oryza sativa Indica Group]
Length = 569
Score = 368 bits (944), Expect = 1e-99, Method: Composition-based stats.
Identities = 184/511 (36%), Positives = 264/511 (51%), Gaps = 80/511 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YNT R+ FQ P + MYVCG T YD +HIG+AR + FDVLYR LRY
Sbjct: 70 RELHLYNTKSRRKELFQPRVPGGEVGMYVCGVTPYDDSHIGHARAYVAFDVLYRYLRYL- 128
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRN TDIDDKII RA Q + + ++ + + F+ D L CL P+
Sbjct: 129 -DHKVRYVRNFTDIDDKIIARANQ------LGEDPFSLSKRYSDDFLSDMANLHCLPPSV 181
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PR ++HI Q+I +I+ II + AY ++ F + P YG S RK+D+ + G RV
Sbjct: 182 EPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKLDDNRAGERVAV 241
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG FDIHGGG DLI
Sbjct: 242 DERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHSFDIHGGGEDLI 301
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A + + N WIHNGF+N+ +KMSKS GNF+TI ++ E
Sbjct: 302 FPHHENEIAQSRAAC-CDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRKVTEL------- 353
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------- 354
+ +R+ +L THYR PI++T++ + + + T + + +
Sbjct: 354 YHPLALRMFLLGTHYRSPINYTIE---QLNVASDRLYYTYQTLQDCEESCQQHQSKAGDP 410
Query: 355 -------------------LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
+ +DL+T A+ A+ + + K L +
Sbjct: 411 LPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKGKKQEKRLESLS 470
Query: 387 AS-------AHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSS 427
A +LG+ E ++ K + + + ++ER K K++
Sbjct: 471 AMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEERTSARKAKQYEK 530
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+D IRK+L + G L D + T W+
Sbjct: 531 SDEIRKELAAVGIALMDGPD------GTTWR 555
>gi|298377784|ref|ZP_06987734.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
gi|298265230|gb|EFI06893.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_19]
Length = 491
Score = 367 bits (943), Expect = 1e-99, Method: Composition-based stats.
Identities = 159/497 (31%), Positives = 234/497 (47%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L AR D +
Sbjct: 352 MKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ N S A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASAGGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|85703328|ref|ZP_01034432.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
gi|85672256|gb|EAQ27113.1| cysteinyl-tRNA synthetase [Roseovarius sp. 217]
Length = 472
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 202/458 (44%), Positives = 274/458 (59%), Gaps = 33/458 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R+ F+ +D N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4 IKLHNTKTRRKEVFEPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--- 121
VTYVRN TD+DDKI RA + S IS IT++ TQ F+ D L L P+
Sbjct: 64 HVTYVRNFTDVDDKINARAAESGRS------ISEITAETTQWFLDDMAALGALEPSIRND 117
Query: 122 ------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-SFSRRKIDEQK 174
PRAT +IPQM+ +I+ +I GHAYEA ++F S + S R +D+
Sbjct: 118 PDHQKAMPRATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREHYGKLSGRSVDDMI 177
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
G RV +K+NP DF+LWK S+ PGW+SPWGRGRPGWHIECSAM+ LG+ FDIH
Sbjct: 178 AGARVEVAPYKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIH 237
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL+FPHHENEIAQSCCA + A W+HN L +EG+KMSKS GNF T+ +LLE
Sbjct: 238 GGGNDLMFPHHENEIAQSCCAHPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE- 296
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
+ P VIR L THYR+P+D+T ++ EA+ L KW +
Sbjct: 297 -----QGIPGEVIRFVFLSTHYRKPMDWTAEKAREAKETLWKWQNLTDGAERNRRPYLDV 351
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKNISIA-- 408
+ AL +DLNT AI LH+ +E+ D F+ +LGI + ++ + K++ A
Sbjct: 352 IEALSDDLNTSLAISLLHQKFKEARTQDDANRFFSTL-SLLGIGQNWRDGVRKSVEKAFT 410
Query: 409 ----IEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+++L+++ K + ++D IR L +
Sbjct: 411 TSGLLDRLIEQMEEARAKKDWKTSDQIRDALLEADVRI 448
>gi|325981668|ref|YP_004294070.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531187|gb|ADZ25908.1| cysteinyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 459
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 178/480 (37%), Positives = 264/480 (55%), Gaps = 46/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN++ R+ +F I P +++YVCG TVYD+ H+G+AR ++VFD + R +
Sbjct: 1 MLKIYNSIAREKQDFVPITPGKVKLYVCGMTVYDYCHLGHARVLVVFDTVVRWFEA--ND 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA++ N++I +T + Q +D+ L +PTH+P
Sbjct: 59 FTVNYVRNITDIDDKIIKRAQEN------NESIEALTQRFIQAMNEDSVALGVSSPTHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+H+ MI +I ++ AY+ N ++ F + P YG S + +++ + G RV
Sbjct: 113 CATHHVKSMIGMISTLVEKNLAYQAHNGDVYFSVHNFPGYGKLSGKSLNDLRAGERVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK + EP WESPWG GRPGWHIECSAM +LG+ FDIHGGG DL F
Sbjct: 173 SSKKDPLDFVLWKSAKSGEPFWESPWGPGRPGWHIECSAMCEQFLGEHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A N W+HNGF+ ++ KMSKS GNF T+ E+L + +
Sbjct: 233 PHHENEIAQSEGAHD-HPFVNYWMHNGFVRVDNEKMSKSLGNFFTVREIL-------KLY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
V+R +L HYR P++++ Q L + ++ L + I A +
Sbjct: 285 QPEVVRFFILRAHYRSPLNYSDQHLKDTKLALDRLYIALKEVEPISVARVDWNYPYAQKF 344
Query: 355 ---LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI------ 405
+ +D NT AI L LA + K A + + +++ + +
Sbjct: 345 KRAMDDDFNTPDAIALLFDLASDINKTGSREHAGLLKALGGLLGLLQQNPQEYLQNKAAS 404
Query: 406 ------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ +E+L+QER+ K ++S AD IRKQL+ +G ILED + T W++
Sbjct: 405 SELNSSAHDVEQLIQERINARKEGRYSDADTIRKQLQEQGIILEDS------SQGTTWRR 458
>gi|317152040|ref|YP_004120088.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316942291|gb|ADU61342.1| cysteinyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 485
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 172/499 (34%), Positives = 238/499 (47%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK EF + + + MYVCG T YD HIG+AR +VFDVLYR LR+ +
Sbjct: 1 MRLYNTLARKKQEFVPENGNAVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLRHKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT++RN TDIDDKII RA + + I + +F D RL L +P+
Sbjct: 60 -VTFIRNFTDIDDKIINRANEVGKEA------AAIAEQFIGEFYVDMDRLGVLRADVEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HIP+MI L +I HAY + ++ F S YG S R IDE + G R+
Sbjct: 113 CTEHIPEMIALTARLIGQDHAYATPSGDVYFRVRSFAGYGKLSGRNIDELESGARIDPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG GRPGWH+ECSAMS Y DIHGGG DL FP
Sbjct: 173 EKQDPLDFALWKAAKPGEPSWESPWGPGRPGWHLECSAMSEKYAPLPLDIHGGGQDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + AN W+HNGF+ + KMSKS GNF TI ++L+ +
Sbjct: 233 HHENEIAQSEAATG-KPFANFWVHNGFVQINSEKMSKSLGNFFTIRDILD-------KFL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------S 341
+R +L HYR P+DF+ L EAE + + +
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAEKGIRRIYAALAQADAELAKTSWKKSPFPEEMT 344
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIF 385
I+ A+ +D+NT A+ + R + + + +
Sbjct: 345 AELDAIERHWAEAMEDDMNTAGALGHVFSAIRLAGRVTEDKTLRKAEGGRDFLLRIKADM 404
Query: 386 NASAHILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A + +LGI ++ L+ R + K F+ +D IR
Sbjct: 405 AAWSEVLGIFGRDPAGFLAELRDNRAARAGIDPTRVQALLDARQQARQDKDFAKSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + ++D
Sbjct: 465 ELAAMHVEVKDTPQGATWD 483
>gi|238027920|ref|YP_002912151.1| cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877114|gb|ACR29447.1| Cysteinyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 464
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 181/485 (37%), Positives = 255/485 (52%), Gaps = 48/485 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRHPGEVRMYVCGITVYDYCHVGHARMMVVFDVVQRWLRAL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +TS+ +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIGSLTSRFIAAMHEDLDALGVARPE 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT+ +PQM+ +I+ + +G+AY+ ++ ++ + NYG S + +D+ + G RV
Sbjct: 112 HEPRATDFVPQMLGMIETLEANGYAYQASDGDVNYAVRKFANYGRLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + P EP W+S +GRGRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKPGEPADTSWDSKYGRGRPGWHIECSAMGCTLLGHHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A E N W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLAR-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSEVHLDDARASLTRLYTALKDVTPDAAPLDRDEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG---------IE 395
+A+ +D NT A+ L +LA E + + L +LG ++
Sbjct: 344 HARRFAAAMNDDFNTALAVSVLFELAGEVNRTREPALARQLKQLGGLLGLLGREPRAYLQ 403
Query: 396 VCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + AIE + R+ + K ++ AD IR L G LED
Sbjct: 404 QASGAASGALEAGAIEAQIAARVAAKQAKNYAEADRIRAALLEAGVALEDKPGGL----- 458
Query: 455 TRWKQ 459
T W++
Sbjct: 459 TEWRR 463
>gi|187928101|ref|YP_001898588.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
gi|229558781|sp|B2U9P8|SYC_RALPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187724991|gb|ACD26156.1| cysteinyl-tRNA synthetase [Ralstonia pickettii 12J]
Length = 463
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 177/491 (36%), Positives = 255/491 (51%), Gaps = 61/491 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAA 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + +S +T + +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETMSALTGRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ + ++ + P YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG+ FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N+W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 232 GADLQFPHHENEIAQSEGATG-KTFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + A V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAVGAKPDWSE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCKEH--- 400
L A+ +D NT A+ L +LA E K +L A A ++G+ H
Sbjct: 344 SHGKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPELASQLAALAGVIGLLGRDPHVFL 403
Query: 401 -----LNKNISIAIEKLVQERLILL-------KMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + +E ++ER IR L + G +LED
Sbjct: 404 QGGVSADGVDAAEVEARIEERRAAKAARDFARAD-------AIRADLLAAGIVLEDKPGG 456
Query: 449 DNGQRMTRWKQ 459
T W++
Sbjct: 457 L-----TEWRR 462
>gi|88809002|ref|ZP_01124511.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
gi|88786944|gb|EAR18102.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7805]
Length = 499
Score = 367 bits (943), Expect = 2e-99, Method: Composition-based stats.
Identities = 174/518 (33%), Positives = 238/518 (45%), Gaps = 79/518 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++ NTL R+ FQ + + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MPVSLRFTNTLTRRTEPFQPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWS 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VT+V+N TDIDDKI++RA +E S+ + ++ +N F D L L P
Sbjct: 61 GY--AVTFVQNFTDIDDKILKRAAEEGSSMEV------VSERNIDAFHADMDALGILRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
PRAT + + LI + G AY A ++ F YG S R + +Q+
Sbjct: 113 RMPRATRCLEGIRALISELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172
Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
E+ K++P DF LWK + EP + SPWG GRPGWHIECSAM LG DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGDGRPGWHIECSAMVREELGDTIDIHLG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A E A +W+HNG +N+ G KMSKS GNF TI LLE+
Sbjct: 233 GADLVFPHHENEIAQSEAATGQE-LARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------- 337
A +RL +L HYR+P+DFT L A
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTSDALEAATTGWKGLNAALSLGDLHAEALGWGAA 345
Query: 338 ------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-- 383
P + A+ +DLN+ A+ L LAR + L
Sbjct: 346 APMNGGAVLASAPSANEMLLGARQRFSDAMDDDLNSSGALAVLFDLARPLRALANRLDRG 405
Query: 384 ------------------IFNASAHILGIEVCKEHLNK----NISIAIEKLVQERLILLK 421
+ A +LG+ + N S AIE ++ R + +
Sbjct: 406 DAPTHSDDEGRGLQQRWLLLRELAGVLGLRLEHPSGNDTETDLDSQAIEAAIEARRMAKQ 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K F+ AD IR +L ++G L D +T W++
Sbjct: 466 SKDFAEADRIRAELTAQGIELIDKPGG-----ITEWRR 498
>gi|270294934|ref|ZP_06201135.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
gi|317477932|ref|ZP_07937115.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
gi|270274181|gb|EFA20042.1| cysteinyl-tRNA synthetase [Bacteroides sp. D20]
gi|316905846|gb|EFV27617.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_1_36]
Length = 491
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 167/497 (33%), Positives = 242/497 (48%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD +YG S
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + E + W+HN L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-EDMVHYWMHNNMLTVNGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL + +++ IR L HYR +DF+ + L AE L++
Sbjct: 292 ITLEELFKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L A+
Sbjct: 352 DKITPAATSTIDVKSLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLK 411
Query: 380 DLLPIFNASA-HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG+ E ++ L++ER K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDGKDGSEWK 488
>gi|134045577|ref|YP_001097063.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|132663202|gb|ABO34848.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 476
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 170/494 (34%), Positives = 242/494 (48%), Gaps = 59/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL RK EF+ + ++MYVCGPTVYD H G+ R + FD++ R L +
Sbjct: 1 MLKVYNTLTRKEEEFKPLTEKEVKMYVCGPTVYDHTHFGHGRTYVSFDIIRRYLEHIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+RA ++ ++ + F+ D L P
Sbjct: 60 -TVNLVINFTDIDDKIIKRANEKG------KNPQELSEQFINVFLNDMATLKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HIP++I I+ +I G AY+ N + F+ NYG S +++ G R+
Sbjct: 113 KVTEHIPEIIAFIEKLIEKGFAYKTENGVYFEVKKFENYGKLSNINLEDLYSGVRIETSE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK + P EP WESP+G GRPGWHIECSAMSS YLGK FDIHGGG DL FP
Sbjct: 173 KKKNPEDFALWKTAKPREPKWESPFGEGRPGWHIECSAMSSKYLGKQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N W+H GF+ + G KMSKS GNF+TI ++ + +
Sbjct: 233 HHENEIAQSVAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIEDI-------SKEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------- 340
++R + HYR PID+T + +T + L K
Sbjct: 285 PEILRFFFIQRHYRSPIDYTAESMTHVKNNLEKIYNVIENIRISLEKSKKSGAWGENEFL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------------FNA 387
A+ +D NTV A++++ +++ K L+ F
Sbjct: 345 LYDILKNSKHNFYEAMNSDFNTVEALKSVFEVSNGVNKYLSLVETPSEGLLLKAFDFFKI 404
Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ K N I+ L++ R L K + +D IR L++ G+++ED
Sbjct: 405 VGEIFGLFENYFKTSSESNDEEFIKFLIELRSDLRLQKNYEMSDKIRDGLKNIGYLIEDN 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T +K+
Sbjct: 465 P-----KEGTIFKK 473
>gi|260495810|ref|ZP_05815931.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|260196657|gb|EEW94183.1| cysteinyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
Length = 472
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 181/488 (37%), Positives = 265/488 (54%), Gaps = 56/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL + EF+ + + + MYVCGPTVY++ HIGNARP I FD + R L Y +
Sbjct: 1 MIKIYNTLTGHLDEFKPLKENEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYLEYR--D 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQ 122
VTYV+N TD+DDK+I +A E N +I I + + + +DT++L +
Sbjct: 59 YKVTYVQNFTDVDDKMINKANIE------NVSIKEIAERYIKAYFEDTSKLNLKEDGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT++I +MI +IQ +I G+AYE+N ++ F+ YG S++ I++ + G R+
Sbjct: 113 PRATDNIDEMIKIIQALIDKGYAYESNGDVYFEVNKYKDGYGELSKQNIEDLESGARINV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK S P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGGLDLI
Sbjct: 173 NEVKRDPLDFALWKASKPNEPSWDSPWGKGRPGWHIECSAMSRKYLGNSFDIHGGGLDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS CA A W+HNG++ + G KMSKS FI + ++L +
Sbjct: 233 FPHHENEMAQSKCACG-GTFARYWMHNGYIKINGEKMSKSGS-FILLRDIL-------KH 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ VIRL +L +HYR+P+DF+ + L + + L + T +D
Sbjct: 284 FEGRVIRLFVLGSHYRKPMDFSDEELNQTKSSLERIENTLKRIKELDRENIKGTDDCQEL 343
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA----------- 389
+ A+ D NT A+ + +L + K D I S
Sbjct: 344 LATKKEMEAKFIEAMDEDFNTAQALGHIFELVKAVNKTLDEANISKKSLEVIDEVYSYLV 403
Query: 390 ----HILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+++ E +N + IE +++ R + K ++ +D IR +L G ++D
Sbjct: 404 MIIQDVLGVKLKLEVEVNNISADLIELILELRRNAREEKNWALSDKIRDRLLELGIKIKD 463
Query: 445 YKNPDNGQ 452
K+
Sbjct: 464 GKDKTTWT 471
>gi|229845478|ref|ZP_04465607.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
gi|229811581|gb|EEP47281.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 6P18H1]
Length = 459
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 176/495 (35%), Positives = 251/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVERMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+++R +L + G +LED
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWAAADAAR--------------NELTAMGIVLEDG 450
Query: 446 KNPDNGQRMTRWKQK 460
N T W+++
Sbjct: 451 AN------GTTWRKQ 459
>gi|262384651|ref|ZP_06077784.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
gi|262293632|gb|EEY81567.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
Length = 491
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 159/497 (31%), Positives = 234/497 (47%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + + A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHASLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L +AR D +
Sbjct: 352 MKLKPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDVARTINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ N S A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|260582005|ref|ZP_05849800.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
gi|260094895|gb|EEW78788.1| cysteinyl-tRNA synthetase [Haemophilus influenzae NT127]
Length = 459
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 177/495 (35%), Positives = 251/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGADQSAVAFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+ +
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKAEDVEKANGLAARLRELGAILGLLQQEPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
N + IE L+++R +L + G +LED
Sbjct: 405 GSNDDEVAKIEALIKQRNEARAAKDWAAADAAR--------------NELTAMGIVLED- 449
Query: 446 KNPDNGQRMTRWKQK 460
G T W+++
Sbjct: 450 -----GANGTTWRKQ 459
>gi|170733433|ref|YP_001765380.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|229558621|sp|B1JUK8|SYC_BURCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169816675|gb|ACA91258.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 465
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 179/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D T L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIGAMHEDETALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ A+ ++ + +YG S + +D+ + G RV
Sbjct: 112 VEPRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ EP W S +G GRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKRAKEDEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A E N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + D L A L
Sbjct: 344 HGQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|160888583|ref|ZP_02069586.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
gi|156861897|gb|EDO55328.1| hypothetical protein BACUNI_01000 [Bacteroides uniformis ATCC 8492]
Length = 491
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 167/497 (33%), Positives = 242/497 (48%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD +YG S
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSVYFDVEKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + E + W+HN L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-EDMVHYWMHNNMLTVNGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL + +++ IR L HYR +DF+ + L AE L++
Sbjct: 292 ITLEELFKGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L A+
Sbjct: 352 DKITPAATSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITAEDLK 411
Query: 380 DLLPIFNASA-HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG+ E ++ L++ER K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLQEDNASNEEREAAFGKVVDMLLEERSKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDGKDGSEWK 488
>gi|110680368|ref|YP_683375.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
gi|123065404|sp|Q164A4|SYC_ROSDO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109456484|gb|ABG32689.1| cysteinyl-tRNA synthetase [Roseobacter denitrificans OCh 114]
Length = 473
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 279/476 (58%), Gaps = 39/476 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNT R+ +F+ I+ ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1 MTIKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH- 121
VTYVRN TD+DDKI RA + S I+ IT++ TQ F+ D + L P+
Sbjct: 61 PDHVTYVRNFTDVDDKINARAAESGRS------IAEITAETTQWFLDDMAAVGALEPSIK 114
Query: 122 -------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
PRAT +I QM+ +I+++I GHAY A ++F S YG+ S R ID+
Sbjct: 115 DRDHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMI 174
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESP------WGRGRPGWHIECSAMSSHYLG 228
G RV +K+NP DF+LWK S PGW P GRGRPGWHIECSAM+ LG
Sbjct: 175 AGARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLG 234
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDIHGGG DL+FPHHENEIAQS CA AN+W+HN L +EG+KMSKS GNF T+
Sbjct: 235 ATFDIHGGGNDLMFPHHENEIAQSTCAGHN--FANVWMHNEMLQVEGKKMSKSLGNFFTV 292
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
+LL+ + P VIR ML THYR+P+D+T ++ EAE L KW + +
Sbjct: 293 RDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKREEAEETLWKWKKLTDGAESSR 346
Query: 349 PAVLSALY---NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEHLNKN 404
L + +DLNT AI LH+ E+ K+ D F ++ +LGI E ++ ++
Sbjct: 347 RPHLEIIAALKDDLNTPLAISILHRKFAEA-KSDDDKNRFLSTLLLLGIGETWRDGVDVA 405
Query: 405 ISIA------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ A IE L++ K ++++D R LES G ++ K+ + +R
Sbjct: 406 VEEAFQTVSLIEALIESIEKARAQKDWATSDRTRDGLESAGVKVQISKDGVSWERG 461
>gi|238920879|ref|YP_002934394.1| cysteinyl-tRNA synthetase, [Edwardsiella ictaluri 93-146]
gi|259511831|sp|C5B8V6|SYC_EDWI9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|238870448|gb|ACR70159.1| cysteinyl-tRNA synthetase, putative [Edwardsiella ictaluri 93-146]
Length = 461
Score = 367 bits (942), Expect = 2e-99, Method: Composition-based stats.
Identities = 175/483 (36%), Positives = 255/483 (52%), Gaps = 48/483 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII+RA + ++ +T + + +D L P +P
Sbjct: 60 -RLKYVRNVTDVDDKIIKRALENQ------ESCEQLTERMLAEMHRDFDALNIARPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I HAY +N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIALVEQLIARDHAYVASNGDVMFAVDTDPDYGVLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHDGA-YVNCWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + T+ +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDVAAQPTADETFTTRFRA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + L AH+LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREINRLKGEDMAQANALAAQMRGLAHVLGLLEQTPEHFLQS 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE L+++R K ++ AD R L + G +LED G + T W
Sbjct: 405 GAAAGDDEVAQIEALIRQRNDARAAKAWALADEARDSLNAMGIVLED------GPQGTTW 458
Query: 458 KQK 460
++K
Sbjct: 459 RRK 461
>gi|307067211|ref|YP_003876177.1| cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
gi|306408748|gb|ADM84175.1| Cysteinyl-tRNA synthetase [Streptococcus pneumoniae AP200]
Length = 440
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 155/459 (33%), Positives = 224/459 (48%), Gaps = 36/459 (7%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R + EF I+ I+MYVCGPTVY++ H+GNAR + FD + R Y V Y+
Sbjct: 1 MSRDLREFVPIEDGKIKMYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGY--KVAYIS 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII RAR+E + + K F +D T L T PR +
Sbjct: 59 NFTDVDDKIINRAREEGIT------PQEVADKYIAAFREDVTALGVKPATRHPRVVEFMA 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+I ++++I G AYE+ ++ F NY + + +++ +G +
Sbjct: 113 DIIRFVEDLIEKGFAYESQGDVYFRVEKSHNYAKLANKTLEDLDLGASGRTDEETARKEN 172
Query: 191 FI---LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
+ LWK S P E W+SPWG GRPGWHIECS MS+ LG DIHGGG DL FPHH N
Sbjct: 173 PVDFALWKSSKPGEISWDSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTN 232
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQS + AN W+HNGF+N++ KMSKS GNFIT+++ L ++ V+
Sbjct: 233 EIAQSEAKTG-KAFANYWMHNGFVNIDNVKMSKSLGNFITVHDAL-------KTLDGQVL 284
Query: 308 RLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPAVLSALYN 357
R HYR+PI+FT + + +AE L T ++A+
Sbjct: 285 RFFFATQHYRKPINFTEKAVRDAETNLKYLKNTYEQPFTGNVDAQELQNFKDKFVAAMDE 344
Query: 358 DLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
D N + I + ++ + + + I GI +E + IE L+Q
Sbjct: 345 DFNAANGITVVFEMTKWINSGNYDASVKQALADMLEIFGIVFVEE----VLDAEIEDLIQ 400
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+R + F +AD IR QL ++G L D K+ R
Sbjct: 401 KRQEARANRDFETADQIRDQLAAQGIKLLDTKDGVRWTR 439
>gi|330998823|ref|ZP_08322550.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
gi|329576037|gb|EGG57556.1| cysteine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
Length = 464
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 183/490 (37%), Positives = 253/490 (51%), Gaps = 60/490 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R + F++I P + MYVCG TVYD HIG+ R I FDV R L+
Sbjct: 1 MALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TD+DDKII+RA + S + T++ +D L CL P+ +
Sbjct: 61 D--VKFVRNVTDVDDKIIKRAAERKI------LPSELAETYTKRMQEDLGELGCLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +IP+M+ LI+ + G+AY+ N ++ F YG+ S +K+DE + G RV
Sbjct: 113 PRATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS LG+ FDIHGGG DL+
Sbjct: 173 EEAKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGR 300
FPHHENEIAQS A+ +K N W+H+G L + G KMSKS GNF TI + L ET G
Sbjct: 233 FPHHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGD 291
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA 350
+R +L +HYR PIDF+ + +A L +
Sbjct: 292 KNGNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQ 351
Query: 351 VLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL------N 402
A+ +D NT A+ L +LA+E K+ +L +LGI +
Sbjct: 352 FKEAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLDPEAFVKGAVD 411
Query: 403 KNISIAIEKLV-------------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
A+E L+ + D IRK+L K +LED
Sbjct: 412 SVDEAAVEALIAERKAAKAAKNWARA-------------DEIRKELLEKNIVLEDAPGG- 457
Query: 450 NGQRMTRWKQ 459
+T W++
Sbjct: 458 ----VTTWRR 463
>gi|149204784|ref|ZP_01881747.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
gi|149141753|gb|EDM29806.1| cysteinyl-tRNA synthetase [Roseovarius sp. TM1035]
Length = 467
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 210/464 (45%), Positives = 274/464 (59%), Gaps = 26/464 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R+ EF +D N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4 IKLHNTRTRRKEEFTPLDKDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGAE 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA + S I IT++ TQ F+ D L L P H PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAESGRS------IGEITAETTQWFLDDMAALGALEPDHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQM+ +I+ +I GHAYEA ++F S YG S R +D+ G RV
Sbjct: 118 ATQYIPQMVAMIEGLIAKGHAYEAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVEVAP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K+NP DF+LWK S+ PGW+SPWGRGRPGWHIECSAM+ LG+ FDIHGGG DL+FP
Sbjct: 178 YKRNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAHELLGESFDIHGGGNDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA + A +W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 238 HHENEIAQSCCAHPEGEFAKVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNT 361
VIR L THYR+P+D+T ++ EAE L KW G + L+ LY+DLNT
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTAEKAEEAEKTLRKWRGLVQGAETGQVQEIELAPLYDDLNT 351
Query: 362 VSAIQALHKLARESTKNHDLLP------IFNASAHILGIEVCK-----EHLNKNISIAIE 410
IQ L +AR D F A+A +LG+ ++S
Sbjct: 352 HGVIQRLRAMARAIELGIDTPEGTVTPGDFLATARMLGLLEDGMGDWIAQHADDLSDLSL 411
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
L +ER+ + K F+ D ++ L G + K+ +
Sbjct: 412 TLDKERMKAKQTKDFTIVDALKSALTDAGVEVRMTKDGVDLIPG 455
>gi|311896844|dbj|BAJ29252.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 464
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 162/481 (33%), Positives = 249/481 (51%), Gaps = 47/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T+ R++ +F + P + +Y+CG TV HIG+ R + FDV+ R RY
Sbjct: 1 MSLRLYDTMTRQVRDFVPLVPGCVSIYLCGATVQAPPHIGHIRSGLNFDVMQRWFRYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN+TDIDDK+I + R++ I S N + F + L CL P+ +
Sbjct: 61 D--VTFVRNVTDIDDKVIAKGREQSTD------WWKIASANERAFSEGYAALGCLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAY A+ + F ++ P+Y S ++++ + +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYAADGNVYFAVTTFPDYLELSNQELENLRQPAG-DNE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + AN W+HN ++ L G KMSKS GN + ++E++ R W
Sbjct: 232 PHHENEIAQSRAYG--DDFANFWVHNAWVTLAGEKMSKSLGNSVLVSEMV-------RRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPAVL 352
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLAGPHYRSMIEYSEESLREAETGFARIEGFIERAVERCGPVDPAPEVPPAFA 342
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
A+ +DL A+ +H R+ L A +LG++ E
Sbjct: 343 EAMDDDLGVPQALAVVHTAVRQGNSALGADDKESTAARLAEVRAMLGVLGLDPLDEQWAD 402
Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++++R K F++AD IR QL + G +ED +
Sbjct: 403 GAGQGEELTGVVDALVRLVLEQRQAARARKDFATADAIRDQLGAAGLAVEDTPSGPRWTI 462
Query: 454 M 454
Sbjct: 463 G 463
>gi|301308608|ref|ZP_07214561.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
gi|300833402|gb|EFK64019.1| cysteine--tRNA ligase [Bacteroides sp. 20_3]
Length = 491
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 157/497 (31%), Positives = 233/497 (46%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L AR D +
Sbjct: 352 MKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDAARAINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ + A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASAGGNSYETFGKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|16124715|ref|NP_419279.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
gi|221233429|ref|YP_002515865.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
gi|24418699|sp|Q9AAY2|SYC_CAUCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781233|sp|B8GZS3|SYC_CAUCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|13421633|gb|AAK22447.1| cysteinyl-tRNA synthetase [Caulobacter crescentus CB15]
gi|220962601|gb|ACL93957.1| cysteinyl-tRNA synthetase [Caulobacter crescentus NA1000]
Length = 463
Score = 367 bits (941), Expect = 3e-99, Method: Composition-based stats.
Identities = 193/481 (40%), Positives = 269/481 (55%), Gaps = 42/481 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI++TL R+ +F DP + MYVCGPTVY++AHIGN RP++VFDVL+R+LR+ YG
Sbjct: 1 MTLKIHDTLTREKRDFVPADPQRVTMYVCGPTVYNYAHIGNFRPVVVFDVLFRVLRHLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y RN+TD+DDKI ++A E IS+IT + + +D L L PT +
Sbjct: 61 EDAVVYARNVTDVDDKINQKAADEGV------PISVITDRYLAAYHQDADALGALRPTLE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++ +I ++ +G AY A ++FDT S +YG S R +DE G RV
Sbjct: 115 PKATEHIGAILEMIGQLVENGSAYAAEGHVLFDTQSFADYGQLSGRPLDEMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK S EP WESPWG GRPGWHIECSAM LG+ DIH GG+DL F
Sbjct: 175 PYKRHPADFVLWKPSKENEPEWESPWGAGRPGWHIECSAMIDKALGQTIDIHAGGIDLTF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA + AN W+HNGFL++ G KMSKS GN I +ELLET
Sbjct: 235 PHHENEVAQSRCAHKTSVLANYWMHNGFLDMSGEKMSKSLGNVIIPHELLETT------- 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------LSA 354
P VIR A+L HYR+P+D+T + L +++ L + + P +SA
Sbjct: 288 PGEVIRWALLSAHYRQPLDWTPELLEQSKKSLDRLYGALRRAKDVAPDQAMEAPAEVMSA 347
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKE------ 399
L +DLNT A A +++ K + +LG
Sbjct: 348 LMDDLNTPLATSAFFEVSSAIEKAVTAGDTVAIAANKARLLEAGALLGFLQADPDAWFEG 407
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + +E L+ +R+ K +S+AD IR +L++ G ++ D G W+
Sbjct: 408 DASDELKAQVEDLLAKRVAARAAKDWSAADAIRGELDALGVVVMD------GPAGATWRM 461
Query: 460 K 460
K
Sbjct: 462 K 462
>gi|107028742|ref|YP_625837.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116690099|ref|YP_835722.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|254247826|ref|ZP_04941147.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
gi|123370109|sp|Q1BHP1|SYC_BURCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200131|sp|A0K8K2|SYC_BURCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|105897906|gb|ABF80864.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116648188|gb|ABK08829.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|124872602|gb|EAY64318.1| Cysteinyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
Length = 465
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 179/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D T L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIGAMHEDETALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ A+ ++ + +YG S + +D+ + G RV
Sbjct: 112 VEPRATQFIPQMLGMIETLETNGYAYQAADGDVNYSVRKFADYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ EP W S +G GRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKRAKADEPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A E N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGGLAADEIEAQIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|258648227|ref|ZP_05735696.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
gi|260852123|gb|EEX71992.1| cysteine--tRNA ligase [Prevotella tannerae ATCC 51259]
Length = 495
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 161/499 (32%), Positives = 242/499 (48%), Gaps = 57/499 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+ I+NTL RK EF+ + P + MYVCGPTVY H+G+ARP I FD+L+RLL+
Sbjct: 3 EHKLFIHNTLTRKKEEFKPLHPGRVGMYVCGPTVYGDPHLGHARPAITFDLLFRLLKNEG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ +DKI ++A+ E + + +F K
Sbjct: 63 Y--KVRYVRNITDVGHLEHDADEGEDKIAKKAKLEQLE------PMEVAQHYSNRFHKAM 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
L L P+ +P+A+ HI + L+Q I+ +G+AYE N I FD YG S R
Sbjct: 115 DDLNVLPPSIEPQASGHIIEQEALVQKILDNGYAYERNGSIYFDVEKYNTKYRYGILSGR 174
Query: 169 KIDEQK-MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ + K+N DF LWK++ P W SPWG G PGWH EC+AM Y
Sbjct: 175 NLEDTIDASRTLDGVDEKRNQVDFALWKKARPEHIMRWPSPWGDGFPGWHCECTAMGRKY 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL+FPHHE EIAQ+ A+ E+ W+HN + + G+KM KS GNFI
Sbjct: 235 LGDHFDIHGGGMDLVFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFI 293
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
T+ + + + IR +L HYR +DF+ + L + L + +
Sbjct: 294 TLEQFFTGDHPKLDQPYSPMTIRFFILQAHYRSTVDFSNEALQASRKGLDRLMEGFATLG 353
Query: 340 ----------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--------DL 381
T + + +AL +DLN+ I L R + D
Sbjct: 354 RLAGNDGGEITESYAEALSERCYAALNDDLNSPIVISHLFDACRLINQVAYKQTTITPDG 413
Query: 382 LPIFN-----ASAHILGIEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
L + +LG++ + ++ A++ L+ R K ++++D IR
Sbjct: 414 LEALKRVFSLFAFDLLGLKPEADGNAQREESFGKAVDLLLDVRQQAKAAKDWATSDKIRD 473
Query: 434 QLESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 474 DLAALGFAVKDTKDGATWK 492
>gi|256842437|ref|ZP_05547940.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
gi|256736044|gb|EEU49375.1| cysteinyl-tRNA synthetase [Parabacteroides sp. D13]
Length = 491
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 158/497 (31%), Positives = 233/497 (46%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L R D +
Sbjct: 352 MKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ N S A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASASGSNYETFSKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|110598118|ref|ZP_01386396.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
gi|110340250|gb|EAT58747.1| cysteinyl-tRNA synthetase [Chlorobium ferrooxidans DSM 13031]
Length = 481
Score = 366 bits (940), Expect = 3e-99, Method: Composition-based stats.
Identities = 162/494 (32%), Positives = 236/494 (47%), Gaps = 61/494 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R +F+ + P + +YVCGPTVY +H+G+A+ + FDV+ R LR+
Sbjct: 1 MSLFIYNSLSRTKEQFEPLHPGFVSIYVCGPTVYGHSHLGHAKSYVSFDVVVRWLRHCGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V YV+NITD+ +DKI+++AR E I T+ F +D
Sbjct: 61 Q--VKYVQNITDVGHLTDDADEGEDKIMKQARLEKTD------PMEIAQFYTRSFYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKID 171
RL L P P AT HIP+ I LI+ ++ GHAYE N + F S P YG S R ++
Sbjct: 113 RLGILRPNIAPAATAHIPEQIALIERLVETGHAYEVNGNVYFSVESFPGYGRLSGRTDME 172
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
Q+ G RV + K++ +DF LWK++ W SPWG G PGWH+ECSAMS YLG+
Sbjct: 173 AQQSGNRVEVRSEKRHTSDFALWKKAEENHLMKWRSPWGTGYPGWHLECSAMSMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQ+ + W+HN + + G KM KS N + + E
Sbjct: 233 IDIHGGGMENKFPHHECEIAQAESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNSVNLKE 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-- 348
L T + VIR +L +HYR P+DF+ + ++ L K +T +
Sbjct: 292 LFST-------FDPIVIRFFILQSHYRSPLDFSDVAIRASQTGLEKLHETYRRLMETNSG 344
Query: 349 ----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
A+ +D NT A+ L A+ D F A
Sbjct: 345 SGMFAVEPYLDRFNDAMNDDFNTPIAVSVLFDCAKALNTALDRSEGVSETAREEAGKFLA 404
Query: 388 SA--HILGIEV--------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A +LGI E K + + +++ R K K F+ +D +R +L
Sbjct: 405 MAGTEVLGILQPRGSSGDKQSEETGKALEGVMALILELRAEARKNKDFALSDKLRDRLLE 464
Query: 438 KGFILEDYKNPDNG 451
G ++D K
Sbjct: 465 AGIEIKDTKEGATW 478
>gi|261868784|ref|YP_003256706.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
gi|261414116|gb|ACX83487.1| cysteinyl-tRNA synthetase [Aggregatibacter actinomycetemcomitans
D11S-1]
Length = 469
Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats.
Identities = 181/493 (36%), Positives = 255/493 (51%), Gaps = 68/493 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL R+ F+ I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 10 NMLKLFNTLTREKEIFKPIHAGKIGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRYLGY 69
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ TYVRNITD+DDKII+RA + + + + + KD L L P +
Sbjct: 70 DL--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVVEMYKDFDALNILRPDFE 121
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+HIP++I ++Q +I GHAY N +++FD S +YG SR+ +++ + G R+
Sbjct: 122 PRATHHIPEIIDIVQKLIQRGHAYVADNGDVMFDVESFKDYGKLSRQDLEQLQAGARIEI 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+S LG+ FDIHGGG DL+
Sbjct: 182 NEIKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNSKQLGEHFDIHGGGSDLM 241
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 242 FPHHENEIAQSCCAHGNQ-YVNYWLHSGMIMVDKEKMSKSLGNFFTIRDVL-------NH 293
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAVL 352
+ A +R +L HYR ++++ + L A L + A
Sbjct: 294 YDAESVRYFLLTAHYRSQLNYSEENLNLAHGALERLYTALRGTDKSAVAFGGENFVDAFR 353
Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D NT +A+ L ++ARE K + L A ILG+
Sbjct: 354 EAMDDDFNTPNALSVLFEMARELNKLKTEDMAKANGLAARLRELAAILGLLQLDPEQFLQ 413
Query: 401 --LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKN 447
+++ IE L+++R + L G ILED N
Sbjct: 414 AGSDEDEVAKIEALIKQRNESRATKDWAAADAARN-----------ALTEMGIILEDGPN 462
Query: 448 PDNGQRMTRWKQK 460
T W+++
Sbjct: 463 ------GTTWRKQ 469
>gi|284919700|emb|CAX65477.1| hypothetical protein [Enterobacter hormaechei]
Length = 480
Score = 366 bits (940), Expect = 4e-99, Method: Composition-based stats.
Identities = 178/480 (37%), Positives = 250/480 (52%), Gaps = 47/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+ NTL + + S I MYVCG TVYD H+G+AR + FD++ R LR+ +
Sbjct: 21 MIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII+RAR + +T + + D +L L P +P
Sbjct: 81 --VTFVRNITDIDDKIIQRARDTG------EDWRSLTERMVHEMHIDFAKLGILPPNIEP 132
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T HIPQ+I +I+ ++ AY N +++F T+S YG S + I + GTR+
Sbjct: 133 RPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVN 192
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG FDIHGGG DLIF
Sbjct: 193 EYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIF 252
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+H G + + KMSKS NF T+ ++L +
Sbjct: 253 PHHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL-------NRF 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
A +R +L HYR+P++++ + + A L++ A
Sbjct: 305 DAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEA 364
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
+ +D NT A+ L +L RE + L ++LG +E + KN
Sbjct: 365 MDDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNR 424
Query: 406 SI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
S IEKL+ +R +M K+ AD +R +L +G LED T W+
Sbjct: 425 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLED------VGENTSWR 478
>gi|171320751|ref|ZP_02909762.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171094016|gb|EDT39118.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 465
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRALENG------ETIKSLTDRFIGAMHEDEAALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+A + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIETLETNGYAYQAGDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D+NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QGTGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|145635477|ref|ZP_01791177.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267242|gb|EDK07246.1| cysteinyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 459
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 176/495 (35%), Positives = 251/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+++R +L + G +LED
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWAAADAAR--------------NELTAMGIVLEDG 450
Query: 446 KNPDNGQRMTRWKQK 460
N T W+++
Sbjct: 451 AN------GTTWRKQ 459
>gi|303256926|ref|ZP_07342940.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
gi|302860417|gb|EFL83494.1| cysteine--tRNA ligase [Burkholderiales bacterium 1_1_47]
Length = 464
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 183/490 (37%), Positives = 253/490 (51%), Gaps = 60/490 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R + F++I P + MYVCG TVYD HIG+ R I FDV R L+
Sbjct: 1 MALKIYNTLSRSVEPFKSITPEKVGMYVCGVTVYDDCHIGHGRTFIAFDVARRWLQESGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TD+DDKII+RA + S + T++ +D L CL P+ +
Sbjct: 61 D--VKFVRNVTDVDDKIIKRAAERKI------LPSELAETYTKRMQEDLGELGCLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +IP+M+ LI+ + G+AY+ N ++ F YG+ S +K+DE + G RV
Sbjct: 113 PRATQYIPKMLALIEKLEEKGYAYQDKNGDVDFSVRKFKPYGALSGKKVDELQPGERVRV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P DF LWKR+ P EP W+S WG+GRPGWHIECSAMS LG+ FDIHGGG DL+
Sbjct: 173 EEAKQDPLDFALWKRAKPGEPEWDSKWGKGRPGWHIECSAMSCDLLGETFDIHGGGPDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-ETKKFGGR 300
FPHHENEIAQS A+ +K N W+H+G L + G KMSKS GNF TI + L ET G
Sbjct: 233 FPHHENEIAQSEAANG-KKFVNTWMHSGPLRVNGEKMSKSLGNFWTIRDALKETNTQYGD 291
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA 350
+R +L +HYR PIDF+ + +A L +
Sbjct: 292 KNGNETLRFFLLRSHYRSPIDFSSALVEDAHQALIRLYTALKNTPADDNPLDWNEKYAAQ 351
Query: 351 VLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL------N 402
A+ +D NT A+ L +LA+E K+ +L +LGI +
Sbjct: 352 FKEAMDDDFNTAQAVAVLFELAKEVNQTKSPELARQLKKLGGVLGILQLAPEAFVKGAVD 411
Query: 403 KNISIAIEKLV-------------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
A+E L+ + D IRK+L K +LED
Sbjct: 412 SVDEAAVEALIAERKAAKAAKNWARA-------------DEIRKELLEKNIVLEDAPGG- 457
Query: 450 NGQRMTRWKQ 459
+T W++
Sbjct: 458 ----VTTWRR 463
>gi|309790456|ref|ZP_07685017.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
gi|308227504|gb|EFO81171.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
Length = 477
Score = 366 bits (939), Expect = 4e-99, Method: Composition-based stats.
Identities = 173/485 (35%), Positives = 247/485 (50%), Gaps = 44/485 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYN+L RK+ + ++P +RMYVCG TVYD AHIG+A +VFD++ R L +
Sbjct: 9 MTIQIYNSLTRKVEPLETVEPQVVRMYVCGVTVYDDAHIGHAMSAVVFDIIRRYLEFRGY 68
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++ N TD+DDKII RA + + ++ +F+ RL L T
Sbjct: 69 E--VRHIVNFTDVDDKIIARAA------TLGRDPLTMAAQYADEFLAQLERLNVLPATAY 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + ++I + +I GHAY A ++ F +S +YG S R ++E GTR
Sbjct: 121 PRATHTMAEIIDFTERLIAAGHAYPAEGDVYFRVASDADYGKLSGRSLEEMLTGTRFEVD 180
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK + P EP W SPWG GRPGWHIECSAMS +LG+ DIHGGG DL+F
Sbjct: 181 PRKESPADFALWKGAKPGEPAWPSPWGNGRPGWHIECSAMSMKHLGEEIDIHGGGNDLVF 240
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + A W+HNG L L + + ++ ++ F + +
Sbjct: 241 PHHENEIAQSECLTG-KSFARYWVHNGMLQLVNPETRQVEKMSKSLGNVVTIDSFLSQ-Y 298
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------------STSKG 345
A V RL +L ++YR P+ + + + L + + S
Sbjct: 299 DADVFRLIVLSSYYRSPLTYNTEIAADNARKLDRLLGALLPALGSNASGPAVESLNQSVE 358
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIE 395
A LSA+ D NT A+ AL +L R D A +LG+
Sbjct: 359 RTRSAFLSAMDADFNTAGALAALFELVRAINVARDAGVGGDAFSAAQNSLRELASVLGLR 418
Query: 396 VCKEH-LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ +H + ++ IE L++ R L K K+F AD IR +L G LED G +
Sbjct: 419 LNPQHAKQQEVAPFIELLIELRTSLRKAKQFELADTIRTRLADLGVTLED------GPQG 472
Query: 455 TRWKQ 459
TR+K
Sbjct: 473 TRYKV 477
>gi|166712436|ref|ZP_02243643.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzicola BLS256]
Length = 476
Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats.
Identities = 195/496 (39%), Positives = 267/496 (53%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
P +R A+L HYR+P+D++ + +A+ L + T ++
Sbjct: 286 KHPPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALEACGSSGVEVSKT 345
Query: 351 ----VLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHILGI----------- 394
V SAL +DLNT A+ + +A E+ +L+ +SA + +
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHAGESSARMSELHAVRAKLLGAG 405
Query: 395 -----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ I LVQER K K F+ AD IRKQL +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVQERSAAKKGKDFARADAIRKQLADEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|218131787|ref|ZP_03460591.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
gi|217986090|gb|EEC52429.1| hypothetical protein BACEGG_03408 [Bacteroides eggerthii DSM 20697]
Length = 491
Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats.
Identities = 164/497 (32%), Positives = 247/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL+RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + W+HN L + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQSVASQG-HDMVHYWMHNNMLTVNGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL +++ IR L HYR +DF+ + L AE L++
Sbjct: 292 ITLEELFTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L + A+
Sbjct: 352 DKITPAATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLK 411
Query: 380 DLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG++ + + ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDGKDGCEWK 488
>gi|212692228|ref|ZP_03300356.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
gi|265752921|ref|ZP_06088490.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
gi|212665105|gb|EEB25677.1| hypothetical protein BACDOR_01724 [Bacteroides dorei DSM 17855]
gi|263236107|gb|EEZ21602.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
Length = 493
Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats.
Identities = 166/498 (33%), Positives = 246/498 (49%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPSAQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILGI+ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSVFHLFMYEILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNG 451
+L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKDGFTW 489
>gi|224025545|ref|ZP_03643911.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
18228]
gi|224018781|gb|EEF76779.1| hypothetical protein BACCOPRO_02285 [Bacteroides coprophilus DSM
18228]
Length = 492
Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats.
Identities = 161/498 (32%), Positives = 242/498 (48%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY H+G+ARP I FD+LYR L +
Sbjct: 1 MENKLIIYNTLTRRKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILYRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIQLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQ+ ++ + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGETFDIHGGGMDLVFPHHECEIAQAVASEG-HQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L AE L + + +
Sbjct: 292 ITLDEFFTGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNL 351
Query: 345 GIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--- 387
I P A+ +DLNT I L R D +A
Sbjct: 352 ERITPAKATSGIEPQGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKATISAEDL 411
Query: 388 ----------SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQ 434
+LG++ E+ ++ L+++R+ K ++++D IR
Sbjct: 412 EELKSVFHLFVFDLLGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDN 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 LAALGFEVKDTKDGFTWK 489
>gi|304395563|ref|ZP_07377446.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
gi|304356857|gb|EFM21221.1| cysteinyl-tRNA synthetase [Pantoea sp. aB]
Length = 461
Score = 366 bits (939), Expect = 5e-99, Method: Composition-based stats.
Identities = 182/495 (36%), Positives = 249/495 (50%), Gaps = 72/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITDIDDKII+RA + ++I +T++ + D L L P +P
Sbjct: 61 L--NYVRNITDIDDKIIKRANENG------ESIETLTNRMIGEMHNDFAALGILPPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L++ +I GHAY N +++FD S +YG+ SR+ +++ + G RV
Sbjct: 113 RATRHIAEIIELVEKLIARGHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSSCAHD-GPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------QHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
A +R ++ HYR +++ L +A L + + S
Sbjct: 285 DAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVPASGGDAFEARFRS 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + H L A++LGI L
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHALASKLREMANVLGILQQDPELFLQS 404
Query: 402 ----NKNISIAIEKLV------------QERLILLKMKKFSSADYIRKQLESKGFILEDY 445
N IE V E I R +L + G I+ED
Sbjct: 405 GAQVNDEEVAEIEHWVKARADARAAKAWAEADIA------------RDKLNALGVIVED- 451
Query: 446 KNPDNGQRMTRWKQK 460
G + + W++K
Sbjct: 452 -----GPQGSSWRRK 461
>gi|329964460|ref|ZP_08301514.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
gi|328524860|gb|EGF51912.1| cysteine--tRNA ligase [Bacteroides fluxus YIT 12057]
Length = 491
Score = 365 bits (938), Expect = 5e-99, Method: Composition-based stats.
Identities = 166/497 (33%), Positives = 246/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL+RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS + + + W+HN L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQSVASQG-DDMVHYWMHNNMLTINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL + +++ IR L HYR +DF+ + L AE LS+
Sbjct: 292 ITLEELFKGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L A+
Sbjct: 352 DKITPAAVSTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDTVTTEDLK 411
Query: 380 DLLPIFNASA-HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG+ E ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELKETFHTFCFDILGLKEDNASNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K +
Sbjct: 472 TALGFEIKDGKEGCEWK 488
>gi|257067131|ref|YP_003153387.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
gi|256799011|gb|ACV29666.1| cysteinyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
Length = 472
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 164/487 (33%), Positives = 245/487 (50%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF I+ + IRMYVCGPTVYD+ HIGNARP++VFD R +++ +
Sbjct: 1 MKIHNTLTRQKEEFIPIEENKIRMYVCGPTVYDYMHIGNARPLVVFDTFRRYMQFKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII ++ E + +T K +++D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKSIAEGITT------KEVTDKYIAAYMEDAKDLNIDEDDTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT + +I ++ ++ G AYE+ ++ FD S +YG S + I++ G
Sbjct: 113 RATEVMDDIISFVKGLVDKGMAYESEGDVYFDVSKADDYGKLSGKNIEDLIHGASNRLDT 172
Query: 184 HKKNPA----DFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF LWK++ E W+SPWG GRPGWHIECS MS LG+ DIH GG
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWKSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS + + AN W+HNG + ++G KMSKS GNF T++++
Sbjct: 233 DLEFPHHENEIAQSEGLN-EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
+ + +IR +L T+YR+PI+FT + + +A+ L + +
Sbjct: 285 KKEYDLSIIRFWLLTTNYRQPINFTREIIEQAKASLQRLTNAYFRLEELLDKAEDKDLSE 344
Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIF 385
+ + +DLNT AI L +A+ D ++
Sbjct: 345 EEKDLENNLKDFKDKFIEVMDDDLNTADAITVLFDIAKFVNTKLDSSSSKDLVDKTYKLY 404
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
LG+ K+ + IE+L+ +R K K F++AD IR +L S G ++D
Sbjct: 405 KELFESLGLLAKKKEAD-VDEEKIEELIAKRSEAKKAKDFATADKIRDELSSMGITIKDT 463
Query: 446 KNPDNGQ 452
+ +
Sbjct: 464 REGVKWE 470
>gi|257126844|ref|YP_003164958.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
gi|257050783|gb|ACV39967.1| cysteinyl-tRNA synthetase [Leptotrichia buccalis C-1013-b]
Length = 483
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 179/494 (36%), Positives = 262/494 (53%), Gaps = 64/494 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT+ KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R + E
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKGME- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII ++ +E S S ++ K + F +D ++L L +P+
Sbjct: 60 -VEFVQNFTDVDDKIINKSMEEGTSA------SEVSEKYIKYFFEDISKLNILESVKRPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++ ++I +IQ +I +G AYE + ++ F+ +YG S +KI+E ++G R+
Sbjct: 113 VTENMSEVIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK+ EP WESPWG+GRPGWHIECSAM+ YLG FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA AN W+HNGF+ + G KMSKS GNF + E+LE +
Sbjct: 233 HENEIAQSKCAYH-GNFANYWLHNGFIQINGDKMSKSLGNFFLLREILE-------KFSG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------------- 341
VIRL +L THYR+PI+F+ + + + + L ++
Sbjct: 285 NVIRLFILSTHYRKPINFSFENMEDTKKALQNIIKSMNKFENIVEKYKNEKIENVKNSEF 344
Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHDLLPI 384
D A+ D+NT A+ + RE+ K +
Sbjct: 345 SQKIDEFDKKFEEAMAEDMNTPQALATIFDQIRETNKFISTNESEFSTIYYEIKKSYDSL 404
Query: 385 FNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSADYIRKQLE 436
++ GI + E+ K IE L++ R K F +D IR +L+
Sbjct: 405 KAKIENVFGIAIEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSDEIRDELK 464
Query: 437 SKGFILEDYKNPDN 450
G ++D K+
Sbjct: 465 VLGVEIKDNKDGST 478
>gi|254469086|ref|ZP_05082492.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
gi|207087896|gb|EDZ65179.1| cysteinyl-tRNA synthetase [beta proteobacterium KB13]
Length = 453
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 184/475 (38%), Positives = 262/475 (55%), Gaps = 40/475 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKI+NT K +F+ I ++++MYVCG TVYD H+G+AR +IVFD++YR +
Sbjct: 1 MIKIFNTFTSKKEKFKPITENHVKMYVCGMTVYDDCHVGHARVLIVFDLIYRWFLNSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII ++ + + +T + +D+ L+ + PT QP
Sbjct: 61 --VQYVRNITDIDDKIINKSNDQDCK------FNELTDRYIDSMHEDSKALSVIPPTFQP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT IP MI +I ++ G AY N ++ F+ + +YG S++ +D+ G+RV
Sbjct: 113 KATEAIPSMIKMISILVDKGFAYIGKNGDVFFEIAKFKDYGKLSKKNVDDLDAGSRVKID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK+ DF+LWK S EP W+SPWG GRPGWHIECSAMSS LG+ FDIHGGG DLIF
Sbjct: 173 DNKKSFGDFVLWKLSKENEPSWQSPWGNGRPGWHIECSAMSSDILGESFDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS K AN WIHNGF+N++ KMSKS GNF T+ +L + +
Sbjct: 233 PHHENEIAQSESCHG-HKMANYWIHNGFVNVDDEKMSKSLGNFFTLKNVL-------KKY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAVL 352
V+R + +HYR P++++ Q L +A++ + K I +
Sbjct: 285 SGEVVRFFVYKSHYRSPLNYSDQNLNDAKVAVEKIYIALRPYKCIQVDLDWSKASLSKIK 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGI-----EVCKEHLNKNI 405
AL +D N+ AI + KL + K N+DL + LG+ E +K
Sbjct: 345 DALDDDFNSPKAISIIFKLINQLNKGSNNDLANEIYSVLKALGLMAIPQEEFFTKSSKID 404
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IEKL+Q+R K + AD +R +++S G +LED T W+ K
Sbjct: 405 HDHIEKLIQQRAQAKLQKDYQKADELRNEIDSLGVVLEDT------ASGTVWRIK 453
>gi|298490116|ref|YP_003720293.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298232034|gb|ADI63170.1| cysteinyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 486
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 169/501 (33%), Positives = 238/501 (47%), Gaps = 64/501 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F ++P ++MY CG TVYD+ H+G+AR I++DV+ R L+
Sbjct: 1 MTLSIYNTLTRRQEPFTTVEPGKVKMYCCGVTVYDYCHLGHARACIIWDVVRRYLQLIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y++N TDIDDKI+ RARQE + + + + Q + +D +RL
Sbjct: 61 D--VRYIQNFTDIDDKILNRARQEKST------MEAVAERYIQAYFEDMSRLGIKEANEY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LI ++ G AY AN ++ + YG S RK+++ ++G
Sbjct: 113 PRATHTMNGIQRLIHDLEHKGFAYPANGDVYYAVQKFDEYGKLSGRKLEDLQLGASERVN 172
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K+ P DF LWK EP WESPWG+GRPGWHIECSAM LG DIH G
Sbjct: 173 IEDAEYQKKQYPFDFALWKAVKQGEPAWESPWGKGRPGWHIECSAMVRERLGDTIDIHTG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + AN W+HNG + ++G KMSKS GNF TI LL+
Sbjct: 233 GADLIFPHHENEIAQSEAVTG-KPLANYWLHNGMVKVDGEKMSKSLGNFTTIRNLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------- 339
R +RL +LM YR+PIDFT + + A Q
Sbjct: 289 ---RGVDPMALRLFVLMAQYRKPIDFTDEAILAATNGWYTLRQGLLFGYQYGKKLGTGEW 345
Query: 340 -----TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------ 382
+ + + +D N + + +LA+E + +++
Sbjct: 346 GLGIRNNLTSNTYIERFKEVVNDDFNFPGGLAVIFELAKELIREKNIIVHQGKTETPPDK 405
Query: 383 -----PIFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A +LG+ E + IE L+Q+R K K F+ +D IR
Sbjct: 406 LLQEWQTLVTLADVLGLTAQLEIETISEDALTDAEIEDLIQKRQEARKGKNFAESDCIRD 465
Query: 434 QLESKGFILEDYKNPDNGQRM 454
L SKG L D R
Sbjct: 466 DLLSKGITLIDNCEGTRWHRG 486
>gi|237711499|ref|ZP_04541980.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
gi|229454194|gb|EEO59915.1| cysteinyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
Length = 493
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 166/498 (33%), Positives = 246/498 (49%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPSAQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATLSAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILGI+ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSVFHLFMYKILGIKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNG 451
+L + GF ++D K+
Sbjct: 472 ELAALGFEVKDTKDGFTW 489
>gi|86141205|ref|ZP_01059751.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
gi|85831764|gb|EAQ50219.1| cysteinyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
Length = 495
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 161/494 (32%), Positives = 236/494 (47%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K++IK+YN+L F+ + N+ MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 7 KQEIKVYNSLSGSKETFKPLLEGNVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 66
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E + + T F
Sbjct: 67 Y--KVRYVRNITDAGHLTDDADEGEDKIAKKARLEQIE------PMEVVQQYTIDFHTIL 118
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
+ CL P+ +P AT HI + I +I+ II +G AYE N + FD + +YG S R
Sbjct: 119 QKFNCLPPSIEPTATGHIIEQIEIIKEIIDNGFAYEKNGSVYFDVLKFNESHDYGKLSGR 178
Query: 169 KIDEQKMGTRVPEKYHKKNP-ADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ TR +K DF LWK++ P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 179 NLEDMIANTRELTAQSEKKNAQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKY 238
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQS ++ N W+H L L G+KMSKS+GN I
Sbjct: 239 LGEQFDIHGGGMDLKFPHHECEIAQSEASNGKNP-VNYWLHANMLTLNGKKMSKSDGNNI 297
Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
++ F + + V R ++ HYR +DF+ L +E ++ +
Sbjct: 298 FPAQIFTGDSPFLTKGFSPSVARFFVMQAHYRSVLDFSNDALLASEKGFNRLMEAVNLLE 357
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF------- 385
+ + A+ +D N+ I L + A+ + D
Sbjct: 358 ALPTSEKSSIDVEIWKQSCYDAMNDDFNSPILIAQLFEAAKFIHQIKDSKAAITQTDLED 417
Query: 386 ------NASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+E E ++ AIE L+Q R K F+++D IR QL
Sbjct: 418 FKTTIKAFVFDVLGLEDVNAAAEANTDKLNGAIELLIQLRKEARANKDFATSDQIRDQLL 477
Query: 437 SKGFILEDYKNPDN 450
G L+D +
Sbjct: 478 ELGIQLKDGREGTT 491
>gi|291287685|ref|YP_003504501.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290884845|gb|ADD68545.1| cysteinyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 479
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 178/485 (36%), Positives = 251/485 (51%), Gaps = 55/485 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NTL K EFQ + N+++YVCG TVYD HIG+AR VFDV+ R L +
Sbjct: 1 MLKVFNTLSNKKEEFQPLQKDNVKIYVCGVTVYDLCHIGHARSSGVFDVIRRYLMFKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TDIDDKII+R+ ++ + + + D L L P H P
Sbjct: 60 -NVTFVKNFTDIDDKIIKRSNEKQMD------WRELAANFIAEHDADMDSLNILRPDHTP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT++I QMI + + +I G AYE+N +I + YG S RK+++ G R+
Sbjct: 113 KATDYIKQMIQMCETLIEKGFAYESNGDIYYRVQKFEEYGKLSHRKLEDMMAGARIEVSV 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF+LWK S P EP WESPWG+GRPGWHIECS MS LG FDIHGGG DL+FP
Sbjct: 173 KKENPYDFVLWKASKPGEPSWESPWGQGRPGWHIECSVMSEDLLGLPFDIHGGGKDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + WIHNGF+N+ KMSKS GNF TI ++L + +
Sbjct: 233 HHENEIAQSEAACGC-MFSKYWIHNGFVNVNQEKMSKSLGNFFTIRDVL-------KEFD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------QTSTS 343
A ++R ++ THYR +DF+ L EAE L++ +
Sbjct: 285 AEIVRYFLMTTHYRSALDFSQDHLLEAEKSLNRIYTMLDEISRFNAGKKGVDITKEAEKM 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------------NHDLLPIFNASA 389
K +A+ +D NT A+ A+ ++ RE+ + + +F
Sbjct: 345 KETFMDKFQTAMDDDFNTPEALAAMFEVIRETNRLLGSKPNKISFPALQEAVQDVFKVIL 404
Query: 390 HILGI-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGI E + + +Q+R K K F AD IR++L+ +G L D
Sbjct: 405 DVLGIVKYTPEKWFRINLSISEEELRQKIQDRADAKKDKNFELADSIRQELKQQGIELLD 464
Query: 445 YKNPD 449
+
Sbjct: 465 TIDGT 469
>gi|242398167|ref|YP_002993591.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264560|gb|ACS89242.1| Cysteinyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 468
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 177/487 (36%), Positives = 240/487 (49%), Gaps = 60/487 (12%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ ++ EF+ + IRMYVCGPTVYD+ H+G+AR I FDV+ R L + V V
Sbjct: 1 MTKQKEEFKPLRDDEIRMYVCGPTVYDYTHLGHARTYIAFDVIRRYLEHKGY--TVLMVM 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TDIDDKII RA + + + K + F++D L PR T HI
Sbjct: 59 NFTDIDDKIIRRANETG------EDPKELAEKFLKYFLEDMKALKVKPADIYPRVTEHIQ 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+I ++ + G+AY +++ + F+ YG S+ +++ + G RV KKNP D
Sbjct: 113 DIIEFVRKLEEKGYAYGSSDGVYFEVRKYEKYGKLSKVNLEDLRKGVRVEPGEGKKNPED 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK++ P EP WESPWG GRPGWHIECS MS+ YLG+ FDIHGGG DLIFPHHENEIA
Sbjct: 173 FALWKKAKPGEPKWESPWGEGRPGWHIECSTMSTKYLGESFDIHGGGNDLIFPHHENEIA 232
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ E W H GF+ + G KMSKS GNF+TI ELL + + VIR
Sbjct: 233 QTEACTGKE-WVKYWFHTGFVMVSGEKMSKSLGNFVTIRELL-------QRYSPEVIRFF 284
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------TSKGIID------- 348
+L HYR P+D+T + + A+ L + T K +
Sbjct: 285 VLQKHYRSPLDYTEEGIQHAKNNLERLYNTIENIRIAMEKVEVPFKWEKEEFELYETIRD 344
Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILGI 394
+ A+ +D NT A++ + ++A L F + + GI
Sbjct: 345 AKKKLYEAMDDDFNTAEAMKPIFEVANAVNAYLTKVEKPKESVLRKALEFFRIISEVFGI 404
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E KE IE L++ R L K K F AD IR QL G LED
Sbjct: 405 FEEYFKEAKETKEEELIELLIEVRSALRKQKNFELADKIRAQLRELGIQLEDT------P 458
Query: 453 RMTRWKQ 459
+ T WK+
Sbjct: 459 QGTIWKR 465
>gi|148239954|ref|YP_001225341.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
gi|187631643|sp|A5GM79|SYC_SYNPW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|147848493|emb|CAK24044.1| Cysteinyl-tRNA synthetase [Synechococcus sp. WH 7803]
Length = 499
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 173/518 (33%), Positives = 240/518 (46%), Gaps = 79/518 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++ NTL R+ FQ + + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MPVSLRFTNTLTRRTEPFQPLKDGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWS 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VT+V+N TDIDDKI++RA +E S + ++ +N F D L L P
Sbjct: 61 GY--AVTFVQNFTDIDDKILKRAAEEGSS------MEAVSERNIDAFHADMDALGILRPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR-- 178
PRAT + + LI + G AY A+ ++ F YG S R + +Q+
Sbjct: 113 RMPRATRCLEGIRTLIAELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLADQQTNADGR 172
Query: 179 --VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
E+ K++P DF LWK + EP + SPWG GRPGWHIECSAM LG DIH G
Sbjct: 173 VADAEEARKQHPFDFALWKGAKAGEPSFPSPWGNGRPGWHIECSAMVREELGDTIDIHLG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENEIAQS A E A +W+HNG +N+ G KMSKS GNF TI LLE+
Sbjct: 233 GADLVFPHHENEIAQSEAATGQE-LARVWLHNGMVNVGGEKMSKSLGNFTTIRALLES-- 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQT 340
A +RL +L HYR+P+DFT + L A W
Sbjct: 290 ----GLSAMTLRLFVLQAHYRKPLDFTAEALEAATTGWKGLNAALSLGDLHAEALGWTPA 345
Query: 341 STSKGII---------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-- 383
+A+ +DLN+ A+ L +LAR + L
Sbjct: 346 EPMGNDAVVASESSAIDTLLSARQRFSAAMDDDLNSSGALAVLFELARPLRALANRLDRG 405
Query: 384 ------------------IFNASAHILGIEVC----KEHLNKNISIAIEKLVQERLILLK 421
+ A +LG+ + E + S +IE + R + +
Sbjct: 406 DAPNHNDDDGQELLQRWLLLRELAAVLGLRLEHPSAPEEESDLDSQSIEAAIDARRLAKQ 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K F+ AD IR +L ++G L D +T W++
Sbjct: 466 SKDFAEADRIRAELSAQGIELIDKPGG-----ITEWRR 498
>gi|116629010|ref|YP_814182.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
gi|282852713|ref|ZP_06262055.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
gi|311111194|ref|ZP_07712591.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
gi|122273992|sp|Q045X8|SYC_LACGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116094592|gb|ABJ59744.1| cysteinyl-tRNA synthetase [Lactobacillus gasseri ATCC 33323]
gi|282556455|gb|EFB62075.1| cysteine--tRNA ligase [Lactobacillus gasseri 224-1]
gi|311066348|gb|EFQ46688.1| cysteine--tRNA ligase [Lactobacillus gasseri MV-22]
Length = 472
Score = 365 bits (938), Expect = 6e-99, Method: Composition-based stats.
Identities = 163/495 (32%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL R+ EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y
Sbjct: 1 MIMKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I AR+EH ++ + + + F++DT L T
Sbjct: 61 D--VKYVSNFTDVDDKMINEARKEHTTVG------ELADRYIKAFMEDTEALNIEPATLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 PRATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHIN 172
Query: 183 YHKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG
Sbjct: 173 EEEQSKKEDPIDFALWKAQKDDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 QDLEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKQEKMSKSLHNFVTVHDIL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 289 ----KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETL 344
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN--------- 386
+ A+ +D N +A+ ++ L + +
Sbjct: 345 EDSILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKL 404
Query: 387 --ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I G+ ++ IE +V +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 LLAWLEIFGVSFNEKQTEN--DDEIEVMVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 463 T------PQGTRWHR 471
>gi|157145196|ref|YP_001452515.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|157082401|gb|ABV12079.1| hypothetical protein CKO_00929 [Citrobacter koseri ATCC BAA-895]
gi|204636645|gb|ACI01739.1| putative cysteinyl-tRNA synthetase class Ia [Escherichia coli]
Length = 460
Score = 365 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 178/480 (37%), Positives = 250/480 (52%), Gaps = 47/480 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+ NTL + + S I MYVCG TVYD H+G+AR + FD++ R LR+ +
Sbjct: 1 MIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII+RAR + +T + + D +L L P +P
Sbjct: 61 --VTFVRNITDIDDKIIQRARDTG------EDWRSLTERMVHEMHIDFAKLGILPPNIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T HIPQ+I +I+ ++ AY N +++F T+S YG S + I + GTR+
Sbjct: 113 RPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLRAGTRIEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG FDIHGGG DLIF
Sbjct: 173 EYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+H G + + KMSKS NF T+ ++L +
Sbjct: 233 PHHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL-------NRF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
A +R +L HYR+P++++ + + A L++ A
Sbjct: 285 DAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDAWRARFCEA 344
Query: 355 LYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVCKEHLNKNI 405
+ +D NT A+ L +L RE + L ++LG +E + KN
Sbjct: 345 MDDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQSADAFLKNR 404
Query: 406 SI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
S IEKL+ +R +M K+ AD +R +L +G LED T W+
Sbjct: 405 SDLHPAELQLIEKLIHQRSEARRMGKWDKADRLRNELAEQGIDLED------VGENTSWR 458
>gi|317474598|ref|ZP_07933872.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
gi|316909279|gb|EFV30959.1| cysteinyl-tRNA synthetase [Bacteroides eggerthii 1_2_48FAA]
Length = 491
Score = 365 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 164/497 (32%), Positives = 247/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL+RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIALVKEIMKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTSRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + W+HN L + G+KM KS GNF
Sbjct: 233 YLGENFDIHGGGMDLIFPHHECEIAQSVASQG-HDMVHYWMHNNMLTVNGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL +++ IR L HYR +DF+ + L AE L++
Sbjct: 292 ITLEELFTGTHPMLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L + A+
Sbjct: 352 DKITPAATSTVDAKALRAKCYEAMNDDLNSPIVIAHLFEGAKMVNNILAGNDTITAEDLK 411
Query: 380 DLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG++ + + ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEDNASNAEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDGKDGCEWK 488
>gi|315037580|ref|YP_004031148.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
gi|312275713|gb|ADQ58353.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
Length = 477
Score = 365 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 166/495 (33%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ + I MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 4 LKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGY-- 61
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + K F++DTT L T PR
Sbjct: 62 KVKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I +I ++ +I G+AYE + ++ + +YG S + I++ + G
Sbjct: 116 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 175
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 176 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 235
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 236 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 289
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 347
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ ++A+ +D N +A+ A++ L N +
Sbjct: 348 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKKLA 407
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++ K + IE+LV++R K ++++D +R QL+ G ++D
Sbjct: 408 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 467
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 468 T------PQGTRWTR 476
>gi|188576215|ref|YP_001913144.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
gi|188520667|gb|ACD58612.1| cysteinyl-tRNA synthetase [Xanthomonas oryzae pv. oryzae PXO99A]
Length = 474
Score = 365 bits (938), Expect = 7e-99, Method: Composition-based stats.
Identities = 192/494 (38%), Positives = 263/494 (53%), Gaps = 58/494 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR YG
Sbjct: 1 MSLRLHNNLTRRVEPFTPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+ + IS IT + + +D L + P +
Sbjct: 61 --ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT HIPQ++ +I+ +I +GHAY A ++F SS +YG SRR DE G RV
Sbjct: 113 PEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFEDYGKLSRRDPDEMLAGARVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDELPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 PHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA-------KH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
P +R A+L HYR+P+D++ + +A L + T ++
Sbjct: 286 PPEALRYALLSAHYRQPLDWSDGLIEQATNTLDRLYGTLRDLAALEACGSSGVEVSKTIP 345
Query: 351 --VLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHILGIE--------- 395
V SAL +DLNT A+ + +A E+ + L + + +
Sbjct: 346 VEVESALQDDLNTPLALSVIASIASEARALRNELVHGGEPSARMSELHAVRAKLLGAGLA 405
Query: 396 ----------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + I LVQER K K F+ AD IRKQL +G +LED
Sbjct: 406 LGLLQQDPAAWFSRGTDADDDARITALVQERSAAKKAKDFARADAIRKQLADEGIVLEDT 465
Query: 446 KNPDNGQRMTRWKQ 459
+ RWK+
Sbjct: 466 ------PQGVRWKR 473
>gi|254881192|ref|ZP_05253902.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|254833985|gb|EET14294.1| cysteinyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
Length = 493
Score = 365 bits (937), Expect = 7e-99, Method: Composition-based stats.
Identities = 165/499 (33%), Positives = 247/499 (49%), Gaps = 56/499 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSMFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 ELAALGFEVKDTKDGFTWK 490
>gi|238853164|ref|ZP_04643551.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
gi|238834218|gb|EEQ26468.1| cysteine--tRNA ligase [Lactobacillus gasseri 202-4]
Length = 472
Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats.
Identities = 163/495 (32%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL R+ EF+ + + MYVCGPTVY++ HIGNAR +I FD + R Y
Sbjct: 1 MIMKVFNTLTRQKEEFKPLVAGKVSMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I AR+EH ++ + + + F++DT L T
Sbjct: 61 D--VKYVSNFTDVDDKMINEARKEHTTVG------ELADRYIKAFMEDTEALNIEPATLH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ I ++I +Q++I G AYE + ++ + PNYG S + I E + G
Sbjct: 113 PRATHEIQEIIDFVQDLIDKGFAYEVDGDVYYRAKKFPNYGQLSDQNIAELEEGASEHIN 172
Query: 183 YHKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+++ DF LWK E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG
Sbjct: 173 EEEQSKKEDPIDFALWKAQKEDDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 QDLEFPHHENEIAQSEAKTG-KKFVNYWMHNGFVTVGKKKEKMSKSLHNFVTVHDIL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+ V+R M YR PI+++ L +AE +L ++ T +
Sbjct: 289 ----KQIDPQVLRFYMSSVQYRRPINYSEDGLKQAETVLKRYQNTLRNLDARLMDEQETL 344
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN--------- 386
+ A+ +D N +A+ ++ L + +
Sbjct: 345 EDSILRDNLTQAKAEFIEAMDDDFNVQNALSIMYDLTSNLNTHLQKNQVDKPALKKAKKL 404
Query: 387 --ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A I G+ ++ IE +V +R K K ++ +D +R +L++KG ++ED
Sbjct: 405 LLAWLEIFGVSFNEKQTEN--DDEIEVMVAKRDEARKNKNWAESDRLRDELQAKGIVIED 462
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 463 T------PQGTRWHR 471
>gi|28377486|ref|NP_784378.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
gi|38258341|sp|Q88YX9|SYC_LACPL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|28270318|emb|CAD63219.1| cysteine--tRNA ligase [Lactobacillus plantarum WCFS1]
Length = 470
Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats.
Identities = 166/481 (34%), Positives = 244/481 (50%), Gaps = 53/481 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++NTL R+ F+ I P ++MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLSVFNTLTRQKEPFKPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYCGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+RA ++H ++P + + + F++DTT + T P
Sbjct: 60 -HVDYVSNFTDVDDKLIKRAAEDHTTVP------AVADRFIKAFMEDTTAVNIEPATVHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ +IP++I +Q +I G+AYE+ ++ + YG S ++ID+ ++G
Sbjct: 113 RASENIPEIIAFVQALIEKGYAYESAGDVYYRARKFKKYGQLSDQRIDDLEVGASQHTAD 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E WESPWG GRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 173 EETDRKEDPIDFALWKAAKPGEISWESPWGAGRPGWHIECSVMSTKYLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS + AN W+HNGF+ + + KMSKS GNF+T+++++
Sbjct: 233 LEFPHHENEIAQSEAKTG-KTFANYWLHNGFVTVGDDNEKMSKSLGNFVTVHDII----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
++ V+R M T YR PI +T L EA L K
Sbjct: 287 --KTVDPQVLRFFMATTQYRRPIQYTQANLDEAANNLDKLRNAYRNLTFRLQDATNGTDT 344
Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNA 387
+ +A+ +D N + + A+++LA+ +
Sbjct: 345 AVAEQLQTLITNFGTAMDDDFNVQNGVAAVYELAKLANVYAAKATVQKETLIALQKALVQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ G+ + AI+ L+ ER K K F+ AD IR L+ +G +LED
Sbjct: 405 LTGVFGV-TFETANATLADDAIQALIDEREAARKAKDFAKADQIRDDLKVQGIMLEDTPQ 463
Query: 448 P 448
Sbjct: 464 G 464
>gi|269468026|gb|EEZ79749.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 452
Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats.
Identities = 175/468 (37%), Positives = 250/468 (53%), Gaps = 43/468 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL ++ F IDP+ + MYVCG TVYD+ H+G+AR +++FDV+ R LR ++
Sbjct: 1 MLKIYNTLSKQKEVFHPIDPNKVGMYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHF-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I +T++ +D L L P +P
Sbjct: 59 PNVEYVRNITDIDDKIIKRAVENK------EDIYSLTNRFIDAMHEDERALGVLPPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+ + QM Y+I+ +I G AY+ N ++ + YG S + +DE + G RV +
Sbjct: 113 RATDAMDQMFYMIEALIEKGIAYQAKNGDVYYSVRDFEGYGKLSGKNLDELEAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK + P EP W SPWG GRPGWHIECSAMS+H+LG FDIHGGG+DL F
Sbjct: 173 TDKKDPLDFVLWKMAKPSEPSWSSPWGDGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+H GF+N+ KMSKS NF TI +LE+ +
Sbjct: 233 PHHENEIAQSEGANGC-TFVNTWMHVGFVNINDEKMSKSLNNFFTIRVVLES-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
+R ++ +HYR P++F+ L A+ L++ D A+
Sbjct: 285 DGETLRYFIMSSHYRSPLNFSDDNLNLAKTSLTRLYTAMRGLSASDAAMDEVSQRFDFES 344
Query: 356 ------YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK--- 398
+D NT A+ L +LA+ D L + +GI
Sbjct: 345 RFNAALDDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGGYIGILQTDADS 404
Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ I+ +++R K F+ +D+IR +L G L+D
Sbjct: 405 FLKRGVDLADEDIDAKIKQRDEAKAYKDFALSDHIRGELPKLGLELKD 452
>gi|290579657|ref|YP_003484049.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
gi|254996556|dbj|BAH87157.1| putative cysteinyl-tRNA synthetase [Streptococcus mutans NN2025]
Length = 447
Score = 365 bits (937), Expect = 8e-99, Method: Composition-based stats.
Identities = 163/466 (34%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+TL R + EF I + + MYVCGPTVY++ H+GN R I FD + R Y
Sbjct: 1 MIKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + ++ K F +D L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAAAKAGMTT------KALSDKFIAAFKEDVAALGVKPATENP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +++ +I +Q ++ G AYE++ ++ F NY + + + ++E + G
Sbjct: 113 RVIDYMQDIIDFVQVLVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDA 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K++P DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ESDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS +K AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KKFANYWMHNGFVNIDNEKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIID--------PA 350
+ V+R HYR+P +FT + R E + K +D
Sbjct: 285 TMDGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEATFIRFLEK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D NT + I + +LA+ N + F I G+ +E +
Sbjct: 345 FQAAMDEDFNTANGITVVFELAKWINSGHYNQTVKDKFAEILQIFGVVFKEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER + F+ AD IR L ++G L D K+ R
Sbjct: 401 EIEKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKDGVRWMR 446
>gi|319405467|emb|CBI79086.1| Cysteinyl-tRNA synthetase [Bartonella sp. AR 15-3]
Length = 502
Score = 365 bits (937), Expect = 9e-99, Method: Composition-based stats.
Identities = 215/503 (42%), Positives = 296/503 (58%), Gaps = 51/503 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ YNTL RK +F ID + +R+YVCGPTVYD+AHIGNARP+IVFDVL+RLLR+ YGE
Sbjct: 3 ELRFYNTLTRKKEDFIPIDATKVRLYVCGPTVYDYAHIGNARPVIVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITD+DDKI +A ++P++ +NDAI +T + QF +DT L CL PT QP
Sbjct: 63 NHVIYARNITDVDDKINAKAAFQYPNLELNDAIHQLTEHTSYQFQQDTLALGCLPPTSQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIF---DTSSIPNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ ++ +LI+ ++ G+AY A+N I+F P YG F++R +DE + G R+
Sbjct: 123 RATDHLEEIRFLIERLLEKGYAYIADNHILFSVGSMGDNPRYGMFAKRSLDEMRAGARIE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIEC--------------SAMS 223
+KK DF+LWK S EPGW SP G RPGWHIEC +
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGIPVLGRPGWHIECSAMSMAKLLSPYGGGFVC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+FDIHGGG+DLIFPHHENEIAQSC A E+ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGIDLIFPHHENEIAQSCSAFGTERMANFWMHNGFLQVEGKKMSKSLG 302
Query: 284 NFITINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NF+TI LLE F R W IR +ML THYREP+++T+QRL ++ L
Sbjct: 303 NFVTIRSLLENDFFEFAGILSDEIKRIWAGLSIRFSMLQTHYREPLNWTMQRLVQSSNEL 362
Query: 335 SKWPQTSTSKGI-------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
W + S+ +D +++ L NDLNT + I L K ++ +
Sbjct: 363 YHWYELLRSEKWCLDDKQSVDSSLIKTLSNDLNTWNTITILRKFYKKHN-----VVALAR 417
Query: 388 SAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
LG+ + K I++ + ERL L+ K++++AD IR +L +
Sbjct: 418 GMDFLGLLRQEFIKEKECPLFISKMHFDLQFIDQRIAERLCLIHNKEWAAADKIRDELAA 477
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G L+D K+P G+R+T W+ K
Sbjct: 478 GGIFLKDSKDPQTGERITTWETK 500
>gi|264677338|ref|YP_003277244.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
gi|262207850|gb|ACY31948.1| cysteinyl-tRNA synthetase [Comamonas testosteroni CNB-2]
Length = 461
Score = 365 bits (937), Expect = 9e-99, Method: Composition-based stats.
Identities = 174/492 (35%), Positives = 244/492 (49%), Gaps = 72/492 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F ++P ++RMYVCG TVYD H+G+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + + I +T + +D L PT +
Sbjct: 61 --KVTYVRNITDIDDKIIKRAVENG------ETIRSLTDRMIDALHQDADALGIERPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+A N ++ + P YG S + +DE G RV
Sbjct: 113 PRATEYVPQMLGMIARLQDKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + EP W+SP+G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 ADGKHDPLDFVLWKSAKADEPADVRWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A IR ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVTPAEVQIDWSNPYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ D T A+ L +LA E K+ ++ + A LG+ +
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKALGACLGLLQAEPQKF---- 400
Query: 407 IAIEKLVQERLILLKMK--------------------KFSSADYIRKQLESKGFILEDYK 446
L ++ AD IRK+L +G +L+D
Sbjct: 401 ----------LQAGAEGVDAAAIEAQIAARAEAKAAKNWAEADRIRKELLDQGIVLKDS- 449
Query: 447 NPDNGQRMTRWK 458
T W+
Sbjct: 450 -----AAGTTWE 456
>gi|325956062|ref|YP_004286672.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
gi|325332627|gb|ADZ06535.1| cysteinyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
Length = 474
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 166/495 (33%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ + I MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + K F++DTT L T PR
Sbjct: 59 KVKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I +I ++ +I G+AYE + ++ + +YG S + I++ + G
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ ++A+ +D N +A+ A++ L N +
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKNLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++ K + IE+LV++R K ++++D +R QL+ G ++D
Sbjct: 405 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 465 T------PQGTRWTR 473
>gi|190570547|ref|YP_001974905.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|254781699|sp|B3CN54|SYC_WOLPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|190356819|emb|CAQ54186.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 464
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 202/471 (42%), Positives = 274/471 (58%), Gaps = 38/471 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNTL +K F ID +I+MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG
Sbjct: 3 KLYNTLTKKKEPFTPIDKDHIKMYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYG--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I I+ T+ F +D + C PT++P+A
Sbjct: 61 VTYVRNITDIDDKIINAANEK------NSNIESISKYYTKTFHEDMESINCAEPTYEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T +I +I LI++++ GHAYE+N + F S P YG S +KIDE G+RV +K
Sbjct: 115 TENIDNIIKLIESLLQAGHAYESNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGENK 174
Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+P DF+LWK + + W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL
Sbjct: 175 KHPGDFVLWKPANETDYKLSSHWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQ 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNGFL + KMSKS N + + +LL++
Sbjct: 235 FPHHENEIAQSKSAFAESTFAKYWVHNGFLTVNEEKMSKSLFNIVKVRDLLDS------G 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDPAVLSAL 355
VIR A+L THYR+P+D+T ++E++ L+K+ S + + AL
Sbjct: 289 IKGEVIRYALLKTHYRKPLDWTENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEAL 348
Query: 356 YNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE---VCKEHLNKNIS 406
NDLN A+ LH++A E K + L F SA +GI + +
Sbjct: 349 KNDLNIPEAVAILHEMATEINKTSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVSH 408
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE+L+ R + + K + +AD IR+QL+ G + D ++ T W
Sbjct: 409 QEIERLIDLRKVAKQNKDYDTADKIREQLKQMGVTISDNEDGT-----TTW 454
>gi|94676564|ref|YP_588592.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
gi|123081502|sp|Q1LTX2|SYC_BAUCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|94219714|gb|ABF13873.1| cysteinyl-tRNA synthetase [Baumannia cicadellinicola str. Hc
(Homalodisca coagulata)]
Length = 462
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 173/482 (35%), Positives = 250/482 (51%), Gaps = 48/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL K F+ I + +YVCG T YD HIG+ R + FDV+ R LRY E
Sbjct: 1 MLAIFNTLTNKKEIFKPIHIGKVALYVCGVTAYDLCHIGHVRTFVTFDVVIRYLRYCGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+RNITDI+DKII +A ++ +T + + D L L P +P
Sbjct: 61 --VNYIRNITDIEDKIIRKAANNG------ESCQQLTDRMIAEMHHDLDLLNILRPDKEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI ++I L + +I HAY +N +++F S NYG S + +++ ++G RV
Sbjct: 113 RATQHIKEIIQLTRQLIDKEHAYIASNGDVMFAIESANNYGILSSQNLNQLQIGQRVKIT 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAMS YLGK FDIHGGG DLIF
Sbjct: 173 TVKRNPMDFVLWKMSKHGEPTWSSPWGNGRPGWHIECSAMSIKYLGKHFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS C + N W+H+G + + KMSKS NF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCMENN-PYVNFWMHSGMVTICNEKMSKSLSNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
A +R ++ +HYR+P++++ + L A L + +
Sbjct: 285 DAETVRYFLISSHYRKPLNYSEKSLQLARTALKSLYIALRNTKKEVIPSGGEYFIEQFMM 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH----- 400
A+ ND NT +A L +LA E + + A+ILG+
Sbjct: 345 AMNNDFNTPAAHAVLFQLAHEVNRLKTKNIKSAQGMAATLRYLANILGLLEQDPEVFLQK 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IE+LV++R + K ++ AD +R++L + G +LED + T W
Sbjct: 405 QKIVTDLNIALIEELVKQRNNIRKKHQWVQADKVREKLAAMGIVLEDT------PQGTIW 458
Query: 458 KQ 459
++
Sbjct: 459 RR 460
>gi|301168673|emb|CBW28264.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 10810]
Length = 459
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 175/495 (35%), Positives = 250/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 HATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWSSPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERL--------------ILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+++R +L + G +LED
Sbjct: 405 GSDDDEVAKIEALIKQRNKARAAKDWAAADAAR--------------NELTAMGIVLEDG 450
Query: 446 KNPDNGQRMTRWKQK 460
N T W+++
Sbjct: 451 PN------GTTWRKQ 459
>gi|326202353|ref|ZP_08192222.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
gi|325987471|gb|EGD48298.1| cysteinyl-tRNA synthetase [Clostridium papyrosolvens DSM 2782]
Length = 461
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 158/472 (33%), Positives = 231/472 (48%), Gaps = 41/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL R+ +F+ ID +R+Y CGPTVY++AHIGN R + D+L R+L Y
Sbjct: 1 MKVYNTLSRQKEDFKPIDDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLEYNGY-- 58
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
+ +V NITD+ +DK+I+ AR++ + I T F+KD L
Sbjct: 59 SLKHVMNITDVGHLVSDEDEGEDKMIKGAREQKKT------PLEIAEYYTNIFMKDIKAL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P P+AT HIP+M+ + ++ G YE ++ I FD YG SR +++Q
Sbjct: 113 NIQVPEIVPKATEHIPEMLEFVHGLVDKGFGYETSDGIYFDIQKFEGYGKLSRANLEDQI 172
Query: 175 MGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
G RV K +PADF +WK+ W S WG G PGWHIECSAM YLG FDI
Sbjct: 173 AGARVEVNEEKHHPADFAIWKKAPKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFDI 232
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
H GG+D I HHENEIAQS + N W+H F+ + KMSKS GN TI+ L+E
Sbjct: 233 HTGGVDHIPVHHENEIAQSEALL-EKSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNLME 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTS 341
+ + R L HYR ++FT + + A++ ++ S
Sbjct: 292 ------KGYDPMAFRYMCLNAHYRNKLNFTWEVMQSAQVSYDRFVEGVLSHKDGKEQLDS 345
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
A+ +DLN A+ R K+ ++ + I G + K+
Sbjct: 346 AVVKEFLSDFEDAINDDLNIPKALGVAWNAIRYGKKSQEIYELLTKMNKIFGFNLDKKKD 405
Query: 402 N---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ IS ++KL++ER K + +D IR +L++ GF +ED N
Sbjct: 406 STGETEISPEVQKLLEERQEARAQKNWKRSDEIRDELKAMGFAVEDTANGPK 457
>gi|24378673|ref|NP_720628.1| cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
gi|30316156|sp|Q8DWA9|SYC_STRMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|24376535|gb|AAN57934.1|AE014867_6 putative cysteinyl-tRNA synthetase [Streptococcus mutans UA159]
Length = 447
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 162/466 (34%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+TL R + EF I + + MYVCGPTVY++ H+GN R I FD + R Y
Sbjct: 1 MIKIYDTLTRSLREFVPIHENTVNMYVCGPTVYNYIHVGNGRSAIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + ++ K F +D L T P
Sbjct: 60 -TVNYISNFTDVDDKIIKAAAKAGMTT------KALSDKFIAAFKEDVAALGVKPATENP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
R +++ +I +Q ++ G AYE++ ++ F NY + + + ++E + G
Sbjct: 113 RVIDYMQDIIDFVQILVDKGFAYESSGDVYFRVRKSDNYAALANKTLEELEIGASGRVDA 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K++P DF LWK + E W+SPWG GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ESDCKEDPLDFALWKAAKEGEIAWDSPWGAGRPGWHIECSVMATTILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS +K AN W+HNGF+N++ KMSKS GNFIT+++ L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KKFANYWMHNGFVNIDNEKMSKSLGNFITVHDAL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQ--RLTEAEILLSKWPQTSTSKGIID--------PA 350
+ V+R HYR+P +FT + R E + K +D
Sbjct: 285 TMDGQVLRFFFATQHYRKPFNFTEKAIRDAEINLKYLKNTYEQPFTATVDEAVFARFLEK 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
+A+ D NT + I + +LA+ + + F I G+ +E +
Sbjct: 345 FQAAMDEDFNTANGITVVFELAKWINSGHYDQTVKDKFAEILQIFGVVFKEE----VLDA 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IEKL++ER + F+ AD IR L ++G L D K+ R
Sbjct: 401 EIEKLIEERQKARAARDFTKADAIRDDLAAQGIKLLDTKDGVRWMR 446
>gi|206560514|ref|YP_002231278.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|229558622|sp|B4ED73|SYC_BURCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|198036555|emb|CAR52452.1| cysteinyl-tRNA synthetase [Burkholderia cenocepacia J2315]
Length = 465
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D + L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIGAMHEDESALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIETLETNGYAYQASDGDVNYSVRKFTNYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P W S +G GRPGWHIECSAM LG FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCSLLGNHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A E N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-ETFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVDADTLALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|327182876|gb|AEA31323.1| cysteinyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
Length = 474
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 166/495 (33%), Positives = 248/495 (50%), Gaps = 62/495 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ + I MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MKVYNTLTRKKEEFKPLVSGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYFEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + K F++DTT L T PR
Sbjct: 59 KVKYVSNFTDVDDKMINEARAEGTTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I +I ++ +I G+AYE + ++ + +YG S + I++ + G
Sbjct: 113 ATHEIKDIINFVKTLIDKGYAYEVDGDVYYRARKFKHYGELSDQNIEQLEEGASEHINDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
+ V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSEENLKQAATILDRFKNTLTNINYRLEDDTASEAV 344
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ ++A+ +D N +A+ A++ L N +
Sbjct: 345 PDLAKAIEETEQKFVTAMDDDFNVQNALTAIYDLLPAVNANANSEKADKETLTLFEKKLA 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + G++ K + IE+LV++R K ++++D +R QL+ G ++D
Sbjct: 405 AWLLVFGVDTEKLCAQNAGSNDDEIEELVKKRDEARANKDWATSDKLRDQLKEMGITIQD 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 465 T------PQGTRWTR 473
>gi|319900445|ref|YP_004160173.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
gi|319415476|gb|ADV42587.1| cysteinyl-tRNA synthetase [Bacteroides helcogenes P 36-108]
Length = 491
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 166/497 (33%), Positives = 241/497 (48%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL+RK F + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEIMKNGYAYESEGSVYFDVAKYNKDHQYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS + + + W+HN L + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQSVASQG-DDMVHYWMHNNMLTINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ EL +++ IR L HYR +DF+ + L AE LS+
Sbjct: 292 ITLEELFNGTHPLLEQAYSPMTIRFFTLQAHYRSTVDFSNEALQAAEKGLSRLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLP 383
I P A+ +DLN+ I L A+ D L
Sbjct: 352 EKIVPATTSTIDVKTLRAKCYEAMNDDLNSPIVIAHLFDGAKMVNNILAGNDSITADDLK 411
Query: 384 IFNAS-----AHILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG+ E ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELEDMFHTFCFDILGLKEDNTSNEEREAAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K +
Sbjct: 472 TALGFEIKDGKEGCEWK 488
>gi|91763128|ref|ZP_01265092.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
gi|91717541|gb|EAS84192.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
Length = 451
Score = 365 bits (936), Expect = 1e-98, Method: Composition-based stats.
Identities = 189/470 (40%), Positives = 274/470 (58%), Gaps = 31/470 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I + N L+ K +F I+ NI MYVCGPTVYD HIGNARP+++FD+L+++L+ YG
Sbjct: 1 MDIFLTNNLKNKKEKFVPINKENIGMYVCGPTVYDNPHIGNARPLVIFDILFKVLKSKYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y+RNITD+DDKII+ A+++ N +IS +T+ + F D L PT Q
Sbjct: 61 HDKINYIRNITDVDDKIIKSAKEK------NLSISELTNNVIKDFNDDCNYLNLDNPTQQ 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT+HI MI +I +I AYEANN + F+ S +YG S +K+++ G+RV
Sbjct: 115 PKATDHIDLMIKMISTLIEKDFAYEANNHVYFEVSKFDDYGKLSNKKLEDLIAGSRVEVS 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK DF+LWK S EP W+S WG+GRPGWH+ECSAMS YLG VFDIHGGG+DLIF
Sbjct: 175 DNKKKSEDFVLWKPSKDDEPSWDSSWGKGRPGWHLECSAMSKKYLGNVFDIHGGGIDLIF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA+ + AN WIHN F+ + KM+KS GN + I + +
Sbjct: 235 PHHENEIAQSRCANDSKVFANYWIHNAFITMSNEKMAKSTGNILKIKDFKDNV------- 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---IDPAVLSALYNDL 359
V++LA++ HY++P+D+ + L + + + KW + +D +LS LY+DL
Sbjct: 288 DGQVLKLALMSAHYKQPLDWNEKLLEDCKNTIDKWYEVYLPPKDKIVLDEDILSPLYDDL 347
Query: 360 NTVSAIQALHKLARESTK-NHDLLPIFNASAHILGIEV--------CKEHLNKNISIAIE 410
NT I LH+L ++ K ++ +F + + +GI K+ + I
Sbjct: 348 NTPGYIAKLHQLYDKALKGGNEEKSLFVLACNFIGILNKTKEEWIEFKKKKSSINEDDIL 407
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ R + K + AD IR +L KG ++ED K+ T WK K
Sbjct: 408 EMISLRNKAREDKNYKEADIIRDKLLDKGVLIED-KDGK-----TIWKLK 451
>gi|16331016|ref|NP_441744.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2500966|sp|P74330|SYC_SYNY3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1653511|dbj|BAA18424.1| cysteinyl-tRNA synthetase [Synechocystis sp. PCC 6803]
Length = 483
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 159/504 (31%), Positives = 236/504 (46%), Gaps = 68/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y++L R Q + P + MY CG TVYD+ H+G+AR I +D++ R L++
Sbjct: 1 MTLRLYDSLTRAKQPLQPLHPGLVTMYCCGITVYDYCHLGHARTCITWDLVRRYLQWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N TDIDDKI++RA E + + ++ K + +D L
Sbjct: 61 E--VRYVQNFTDIDDKILKRAVDESST------MEAVSEKFIAAYFEDMEALGVQPADLY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------G 176
PRAT+ + + LI + G+AY + ++ + + YG S R++++ +
Sbjct: 113 PRATHTLDGIKRLIAELEAKGYAYPSGGDVYYSVRNFDGYGKLSGRRLEDLQAGASGRVT 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P+ K++P DF LWK + P EP WESPWG+GRPGWHIECSAM +LG+ D+H G
Sbjct: 173 VADPDGAQKQDPFDFALWKSAKPGEPAWESPWGKGRPGWHIECSAMVREFLGETIDLHVG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + A W+HNG + ++G KMSKS GNF TI LL
Sbjct: 233 GNDLIFPHHENEIAQSEAVTG-QPLAQYWLHNGMVKVDGEKMSKSLGNFTTIRALL---- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------- 343
++ IRL +L HYR+P+DFT + A +
Sbjct: 288 ---KTVDPMAIRLLVLQGHYRKPLDFTETAIAAATNGWHTLREGLQFGYDYGGDFGWELA 344
Query: 344 -------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------- 383
A A+ +D N + + +LA+ + L
Sbjct: 345 FTPLGPDANQWTVAFQEAVDDDFNFAGGLAVMFELAKHLRSEGNKLKFEGSTPADLDLLQ 404
Query: 384 ----IFNASAHILGIEVCKEHLNKNI----SIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ A ILG+ + E + N IE+LV +R K K ++ D +R L
Sbjct: 405 TQWITLVSLAEILGLSINPESQSSNDNGLTDGDIEQLVAQRTQARKDKNWAEGDRLRDVL 464
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ G L D T W +
Sbjct: 465 QEAGITLVDKPGGL-----TEWFR 483
>gi|150009429|ref|YP_001304172.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
gi|187629835|sp|A6LFT6|SYC_PARD8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149937853|gb|ABR44550.1| cysteinyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
Length = 491
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 156/497 (31%), Positives = 232/497 (46%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L R D +
Sbjct: 352 MKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ + A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|167764089|ref|ZP_02436216.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
43183]
gi|167698205|gb|EDS14784.1| hypothetical protein BACSTE_02472 [Bacteroides stercoris ATCC
43183]
Length = 491
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 170/497 (34%), Positives = 247/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL RK F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ I FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILENGYAYESEGSIYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLGK FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGKHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L AE L++
Sbjct: 292 ITLDEFFTGSNKTLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLARLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L AR
Sbjct: 352 EKIVPGKASTVNVKTLRAECYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLK 411
Query: 380 DLLPIFNASA-HILGI---EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG+ E ++ L+ ER+ K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENTSNEEREAAFGKVVDMLLAERIKAKANKDWATSDKIRDEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFAIKDTKDGCEWK 488
>gi|150003580|ref|YP_001298324.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
gi|187629793|sp|A6KZ38|SYC_BACV8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149932004|gb|ABR38702.1| cysteinyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
Length = 493
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 165/499 (33%), Positives = 247/499 (49%), Gaps = 56/499 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSMFHLFMYEILGLKEEAANNEAHEEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 ELAALGFEVKDTKDGFTWK 490
>gi|52424677|ref|YP_087814.1| cysteinyl-tRNA synthetase [Mannheimia succiniciproducens MBEL55E]
gi|52306729|gb|AAU37229.1| CysS protein [Mannheimia succiniciproducens MBEL55E]
Length = 476
Score = 364 bits (935), Expect = 1e-98, Method: Composition-based stats.
Identities = 178/494 (36%), Positives = 247/494 (50%), Gaps = 73/494 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI+NTL R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY
Sbjct: 18 SMLKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGY 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YVRNITD+DDKII+RA + N+ + + + KD L L P +
Sbjct: 78 DL--RYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDVE 129
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HIP++I +++ +I GHAY + +++FD S YG+ SR+ +++ + G RV
Sbjct: 130 PRATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEI 189
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+ LG FDIHGGG DL+
Sbjct: 190 KSVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLM 249
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA E N W+H G L + KMSKS NF TI ++L
Sbjct: 250 FPHHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT-------K 301
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------- 354
+ A +R L YR +D++ + + A L + ++
Sbjct: 302 YDAESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFKT 361
Query: 355 -LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---N 402
+ +D NT A+ L +LARE K + L A +LG+
Sbjct: 362 AMDDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQG 421
Query: 403 KNISIA---IEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
IE L++ R +L + G +LED
Sbjct: 422 DAADAEVSKIEALIKRRNEARAAKDWAAADAAR--------------NELTAMGVVLED- 466
Query: 446 KNPDNGQRMTRWKQ 459
G + T W++
Sbjct: 467 -----GAKGTTWRK 475
>gi|134094511|ref|YP_001099586.1| cysteinyl-tRNA synthetase [Herminiimonas arsenicoxydans]
gi|166200149|sp|A4G4M2|SYC_HERAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|133738414|emb|CAL61459.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Herminiimonas
arsenicoxydans]
Length = 462
Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats.
Identities = 190/479 (39%), Positives = 256/479 (53%), Gaps = 45/479 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R+ F IDP +RMYVCG TVYD+ HIG+AR M+VFD++ R LR +
Sbjct: 4 LKIYNTLAREKQLFTPIDPGKVRMYVCGMTVYDYCHIGHARVMVVFDLVQRWLRASGFD- 62
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITDIDDKII+RA + + IS +T + +D L P H+PR
Sbjct: 63 -VTYVRNITDIDDKIIKRAAENG------ETISQLTQRFIDAMDEDAAALGVQKPDHEPR 115
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
ATN++PQM+ LI + +G AY+ A+ ++ + YG S + +D+ + G RV
Sbjct: 116 ATNYVPQMLGLIDMLERNGLAYKAADGDVNYSVRDFAGYGKLSGKSLDDLRAGERVDVNT 175
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK S EP W S WG GRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 176 GKHDPLDFVLWKSSKENEPEEVKWSSKWGSGRPGWHIECSAMACELLGEQFDIHGGGADL 235
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 236 QFPHHENEIAQSEGASG-HTFVNYWMHNGFVRVDNEKMSKSLGNFFTIREVLE------- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA 350
+ A V+R +L HYR ++++ L +A L++
Sbjct: 288 KFDAEVVRFFILRAHYRSQLNYSDAHLDDARNALTRMYTALKDVAPDHLPLDMTEAHAVR 347
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIE--VCKEHLNKNI- 405
+ A+ +D NT AI L +LA E + L A I+G+ ++ L+ +
Sbjct: 348 FIDAMNDDFNTPLAIAVLFELANEINREKSPVLARQLIGLAGIVGLLQRPAQQFLHAGLA 407
Query: 406 -SIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ +E L + R K K F+ AD IR L KG ILED T W++
Sbjct: 408 GADEMETLIIGQIAARADAKKAKNFAEADRIRAALLEKGIILEDKPGGL-----TEWRR 461
>gi|323465875|gb|ADX69562.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus H10]
Length = 474
Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats.
Identities = 170/495 (34%), Positives = 250/495 (50%), Gaps = 62/495 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 1 MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I AR E ++P + K F++DTT L T PR
Sbjct: 59 KVKYVSNFTDVDDKMINEARAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I ++I +Q +I G+AYE++ ++ + +YG S + I+ + G
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R M YR I+++ + L +A +L ++ T +
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+ A+ +D N +A+ A++ L N + +
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNAVTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 404
Query: 387 ASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + GI+ K + I++LV++R K K ++++D IR QL+ G ++D
Sbjct: 405 AWLLVFGIDTEKLCSQSAGSNDDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQD 464
Query: 445 YKNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 465 T------PQGTRWTR 473
>gi|145219092|ref|YP_001129801.1| cysteinyl-tRNA synthetase [Prosthecochloris vibrioformis DSM 265]
gi|145205256|gb|ABP36299.1| cysteinyl-tRNA synthetase [Chlorobium phaeovibrioides DSM 265]
Length = 483
Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats.
Identities = 160/493 (32%), Positives = 232/493 (47%), Gaps = 60/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R+ F + P + +YVCGPTVY AH+G+A+ + FDV+ R LR
Sbjct: 1 MTLAIYNSLGREKQPFTPLHPGMVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRQSGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ +DKI +AR E I T+ F +D
Sbjct: 61 --RVKYVQNITDVGHLSDDADEGEDKIARQARLEKTD------PMEIAQYYTRSFYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKID 171
R+ L P P AT HIP+ I L++ ++ GHAYE N + F S P YG S R ++
Sbjct: 113 RMGVLRPNIAPLATGHIPEQIALVEALVKSGHAYEVNGNVYFSVESFPGYGKLSGRTDLE 172
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G RV + K+NP+DF LWK++ W SPWG G PGWH+ECSAMS YLG+
Sbjct: 173 AVQSGARVGVRSEKRNPSDFALWKKAEESHLMQWSSPWGMGYPGWHLECSAMSMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQS A+ + W+HN + + G KM KS N + + E
Sbjct: 233 IDIHGGGMENRFPHHECEIAQSEAANG-KPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKE 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------- 341
+ T IR +L +HYR P+D++ + + L K +T
Sbjct: 292 IFTT-------INPLAIRFFILQSHYRSPLDYSDAAIAASTAGLQKLRETRQRLQGATAG 344
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+ A+ +D NT AI AL A+ D
Sbjct: 345 TGAMNVAPFRERFREAMDDDFNTPVAIAALFDFAKALNAALDRPEGLDQPSLGAAADLFT 404
Query: 388 SA--HILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
A +LGI + + A++ L++ R K F+++D IR L++
Sbjct: 405 MAGVDVLGILEHDSGSIGNGAGDRQRLEGAMKVLMELRSAARSEKDFATSDLIRDGLKAA 464
Query: 439 GFILEDYKNPDNG 451
G ++D + +
Sbjct: 465 GIEIKDTREGASW 477
>gi|313204739|ref|YP_004043396.1| cysteinyL-tRNA synthetase [Paludibacter propionicigenes WB4]
gi|312444055|gb|ADQ80411.1| cysteinyl-tRNA synthetase [Paludibacter propionicigenes WB4]
Length = 488
Score = 364 bits (935), Expect = 2e-98, Method: Composition-based stats.
Identities = 160/496 (32%), Positives = 223/496 (44%), Gaps = 53/496 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + + MYVCGPTVY H+GN R I FD++YR L Y
Sbjct: 1 MEHNLYIYNTLSRKKEQFIPLHEDRVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYLLYL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK ++A+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE------PMEIVQKYTVGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---NYGSFSR 167
L P+ +P AT HI + I +++ I+ G+AYE + FD YG +
Sbjct: 113 LNVFNTLPPSIEPTATGHISEQIEMVKAILESGYAYEIEGTVYFDVEKYNKDLPYGILTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
RK+++ GTR +K DF LW K W SPWG G PGWHIECSAMS+
Sbjct: 173 RKLEDLLEGTRELGGQDEKKGRLDFALWIKAKPETLMQWPSPWGWGFPGWHIECSAMSTK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL HH NEIAQS + + W+H L + G +MSKS GN
Sbjct: 233 YLGATFDIHGGGMDLQATHHTNEIAQSQACNHVAP-VKYWMHTNMLTVNGVRMSKSAGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
EL R + +R M +HYR +DF+ + L +E +
Sbjct: 292 FLPKELFTGAHPLLERGYSPMTVRFFMAQSHYRSTLDFSNEALQASEKGFERLMDGYARL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
+ A+ +D NT AI L + HD +A
Sbjct: 352 QKLQASTASSVYTSSLRSKCEEAMNDDFNTPIAIAHLFDALKAINLIHDGKETISAKDLE 411
Query: 390 -----------HILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+ EV ++ A++ L+ RL + K ++++D IR +L
Sbjct: 412 ELKSVFKVFIEDVLGLKSEVATSGGSEAYKGAVDLLLNMRLAAKQNKDWATSDKIRNELT 471
Query: 437 SKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 ALGFEIKDTKDGFEWK 487
>gi|121593996|ref|YP_985892.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
gi|187629817|sp|A1W6E1|SYC_ACISJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120606076|gb|ABM41816.1| cysteinyl-tRNA synthetase [Acidovorax sp. JS42]
Length = 458
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 179/477 (37%), Positives = 248/477 (51%), Gaps = 43/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + EF ++P ++RMYVCG TVYD H+G+AR MI FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALEEFSPLEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + + I +T + +D L PTH+
Sbjct: 60 -LAVTYVRNITDIDDKIIKRAVENG------ETIRSLTDRMIDALHQDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+A N ++ + P YG S + +DE G RV
Sbjct: 113 PRATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K +P DF+LWK + P EP W SP+G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 QDGKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A +W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A +R ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVEVDWAEGYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL----- 401
+A+ D T A+ L LA E ++ + A LG+
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGGHLGLLQADPQDFLKAG 404
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
AI+ + R K F+ AD IR L ++G +L+D T W+
Sbjct: 405 AGLDEAAIQAQIAARATAKAAKNFAEADRIRNDLLAQGIVLKDS------ASGTTWE 455
>gi|308185969|ref|YP_003930100.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
gi|308056479|gb|ADO08651.1| Cysteinyl-tRNA synthetase [Pantoea vagans C9-1]
Length = 500
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 182/497 (36%), Positives = 249/497 (50%), Gaps = 72/497 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KIYNTL R+ EF+ I I MYVCG TVYD HIG+ R + FDV+ R LRY
Sbjct: 38 RSMLKIYNTLSRQKEEFKPIHAGKIGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRYLG 97
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ YVRNITDIDDKII+RA + ++I +T++ + D L L P
Sbjct: 98 YQL--NYVRNITDIDDKIIKRANENG------ESIETLTNRMIGEMHNDFAALGILPPDE 149
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT HI ++I L+Q +I HAY N +++FD S +YG+ SR+ +++ + G RV
Sbjct: 150 EPRATRHIAEIIELVQTLIARNHAYVADNGDVMFDVLSDTDYGALSRQDLEQLQAGARVE 209
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL
Sbjct: 210 VADVKRNPMDFVLWKMSKADEPAWSSPWGNGRPGWHIECSAMNCKQLGTHFDIHGGGSDL 269
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA N W+H+G + ++ KMSKS GNF T+ ++L +
Sbjct: 270 MFPHHENEIAQSSCAHD-GPYVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------Q 321
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ A +R ++ HYR +++ L +A L + +
Sbjct: 322 HYDAETVRYFLMSGHYRSQLNYGEDNLNQARAALERLYTALRHTDSSVKAHGGEAFEARF 381
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL-- 401
SA+ +D NT A L +ARE + H L A++LGI L
Sbjct: 382 RSAMDDDFNTPEAYSVLFDMAREVNRLKSEDGASAHGLASKLREMANVLGILQQDPELFL 441
Query: 402 ------NKNISIAIEKLV------------QERLILLKMKKFSSADYIRKQLESKGFILE 443
N IE V E I R +L + G I+E
Sbjct: 442 QSGAQVNDEEVAEIEHWVKARADARAAKAWAEADIA------------RDKLNALGVIVE 489
Query: 444 DYKNPDNGQRMTRWKQK 460
D G + + W++K
Sbjct: 490 D------GPQGSSWRRK 500
>gi|167907149|ref|ZP_02494354.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
Length = 471
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 191/484 (39%), Positives = 255/484 (52%), Gaps = 44/484 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I ++NTL R+ Q P + MYVCGPTVY++AHIGNARP +VFDVL RLLR+
Sbjct: 1 MNLPIYLHNTLTRRKEPLQTTTPDRVTMYVCGPTVYNYAHIGNARPAVVFDVLSRLLRHD 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y V Y RN TD+DDKI A + I IT + + D L L+P
Sbjct: 61 Y--PQVVYARNFTDVDDKINAAA------VAAGVPIGTITDRYIDAYHADMQALGVLSPE 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T HIP +I LI+ ++ GHAY ++F S P YG S R+ ++ G RV
Sbjct: 113 LEPRVTEHIPAIIELIETLLARGHAYVVQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK STP PGW+SPWGRGRPGWH+ECSAM +LG DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPDLPGWDSPWGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ CA W+HN F+ ++G+KMSKS GN + + +LL
Sbjct: 233 IFPHHENEIAQGTCAHGT-LYCRTWVHNSFVTVDGQKMSKSLGNVLLVRDLLAQA----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVL 352
P IRLA+L THYR P+D+ QRL+ A L+++ ++ + + DP +L
Sbjct: 287 --PGEAIRLALLSTHYRRPLDWNAQRLSAARQTLTRYYESLSKVAQVAVVPQIAADPQLL 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHL----- 401
AL NDLN A+ LH L SA +LG+
Sbjct: 345 EALRNDLNVPGALVRLHVLLTVLDDADTDAERAHAKSALLTSAALLGLLQQPPQAALAQL 404
Query: 402 ---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
I+ L+ ER + + F+ AD +R+ LE+ GF +ED +
Sbjct: 405 RPAAPATAVQGLGDTRIKALLAEREQARRDRDFAKADALRETLEAAGFTIEDTSAGSVLR 464
Query: 453 RMTR 456
T+
Sbjct: 465 PATK 468
>gi|88800332|ref|ZP_01115898.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
gi|88776909|gb|EAR08118.1| cysteinyl-tRNA synthetase [Reinekea sp. MED297]
Length = 461
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 180/474 (37%), Positives = 255/474 (53%), Gaps = 38/474 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++N+L + F+ +P N+ +YVCGPTVY++ HIGN R +D+L+R+L Y
Sbjct: 1 MSLKLHNSLTGQKEHFEPQNPDNVTLYVCGPTVYNYIHIGNGRSAANYDLLFRVLNALY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTY RN TD+DDKI A+ E IS+ K Q + +D +L L PT
Sbjct: 60 -PKVTYARNFTDVDDKINAAAKDEGVD------ISVFAEKYMQAYDEDMAKLGNLEPTIV 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +I I+ +I GHAY A+ ++F S +YG S+R ++ G RV
Sbjct: 113 PRATEHIGDIITTIEALIERGHAYAADGHVLFAVDSFDDYGKLSKRNTEDMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KKNP DF+LWK S+ PGW+SPWGRGRPGWHIEC+AM +LG+ DIHGGG DL+F
Sbjct: 173 SYKKNPMDFVLWKPSSDDLPGWDSPWGRGRPGWHIECTAMIQKHLGETIDIHGGGTDLLF 232
Query: 243 PHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
PHHENE+AQ C A W+HN L++EG KMSKS GNFI + ++L +
Sbjct: 233 PHHENELAQGTCCSDHSGGYAKYWVHNAMLDIEGEKMSKSLGNFIVLRDILNEQ------ 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------DPAVLS 353
P +IRLA+L HYR ++++ Q L ++ LL + + D +
Sbjct: 287 -PPELIRLALLTAHYRSNMNWSEQLLHQSRSLLDRLYTIKRDGDALITTDIDIRDTEFFA 345
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHL------ 401
L +DLNT A LH+L K L +A A +G+
Sbjct: 346 MLLDDLNTPKAFANLHELTTRFFKAESDDERAALKSEIHAIADFIGVMQMDAQAWFQGTS 405
Query: 402 --NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + AIE L++ER+ + K F+ AD IR QL ++G ++D + R
Sbjct: 406 DDSALSADAIEALLEERVAAKEAKDFARADEIRDQLAAEGIQIKDTREGTLWSR 459
>gi|229074151|ref|ZP_04207197.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228708921|gb|EEL61048.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 449
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 168/472 (35%), Positives = 244/472 (51%), Gaps = 57/472 (12%)
Query: 20 AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y E V YV N TD+DDK+
Sbjct: 2 PLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKL 59
Query: 80 IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
I+ A + +P I + + + +D T L C T PR T ++ +I IQ +
Sbjct: 60 IKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQEL 113
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ G+AYE+ ++ F T YG S + I + + G R+ K++P DF LWK +
Sbjct: 114 VNKGYAYESEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKE 173
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS +
Sbjct: 174 GEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-K 232
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W+HNG++N++ KMSKS GNFI +++++ + + +IR ML HYR P
Sbjct: 233 TFARYWMHNGYINIDNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHP 285
Query: 320 IDFTVQRLTEAEILLSKWPQTSTSK---------------------GIIDPAVLSALYND 358
I+F+ + L L + + A A+ +D
Sbjct: 286 INFSEELLQSTNNGLERIKTAYGNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDD 345
Query: 359 LNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISI 407
NT +AI L+ +A + + + ILG+E+ KE L +
Sbjct: 346 FNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDE 402
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE L+Q+R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 403 EIEALIQKRIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 448
>gi|255016291|ref|ZP_05288417.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_7]
Length = 491
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 156/497 (31%), Positives = 232/497 (46%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLNIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD
Sbjct: 113 MDALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESQGSVYFDVEKYNKDHRYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K N DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLNTTRALDGQDEKHNAIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ A IR +L HYR +DF+ + L AE LS+ +
Sbjct: 292 ITLEQFFTGDHPSLQQAYSAMTIRFFILQAHYRSTVDFSNEALQAAEKGLSRLMEAYGHL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ P A+ +DLN+ I L R D +
Sbjct: 352 MKLQPSATSTVDTKGLREKCFEAMNDDLNSPIVISHLFDATRAINSVKDGKATLSEEDLK 411
Query: 388 ---------SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ + A++ L+ R K ++++D IR +L
Sbjct: 412 ELQEVFHLFLFDILGMKDEASASGNHYEAFGKAVDLLLSIRQQAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TAMGFEIKDTKDGAEWK 488
>gi|90411646|ref|ZP_01219656.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90327536|gb|EAS43889.1| cysteinyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 464
Score = 364 bits (934), Expect = 2e-98, Method: Composition-based stats.
Identities = 174/501 (34%), Positives = 248/501 (49%), Gaps = 81/501 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L ++ EF+ I P + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTKQKEEFKPIQPGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + KD L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCDSLTERLIGEMHKDFDALGMKRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I + + +I G AY +N +++F+ S YG SR+ +D+ + G RV
Sbjct: 113 RATEFIAEIITMCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 MAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCATGSQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLG-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAESVRYFLMSGHYRSQLNYSEENLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHILGIEVCKEH 400
++ +D NT A L + RE + L A ILG+
Sbjct: 345 SMNDDFNTPEAYSVLFDMVREINRLKADETIADNIAQASALGARLRELADILGLLSQDPE 404
Query: 401 ------LNKNISIAIEKLVQERL---------------ILLKMKKFSSADYIRKQLESKG 439
++ IE L+Q+RL +L +
Sbjct: 405 AFLQGGAGQDDVAEIESLIQQRLDARAAKDWAAADAARD---------------KLLAMK 449
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
ILED G + T W++K
Sbjct: 450 IILED------GPQGTTWRRK 464
>gi|260433631|ref|ZP_05787602.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
gi|260417459|gb|EEX10718.1| cysteinyl-tRNA synthetase [Silicibacter lacuscaerulensis ITI-1157]
Length = 466
Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 206/462 (44%), Positives = 268/462 (58%), Gaps = 23/462 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R EF IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG +
Sbjct: 4 IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPE 63
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRN TD+DDKI A +Q + + + + ++ D L L P
Sbjct: 64 HVTYVRNFTDVDDKINATALARKQAGAEGTLEQLVQERSDETIGWYLHDMGALGALEPDQ 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVP 180
PRAT +I QMI +I+++I GHAYEA ++F S + YG S R +D+ G RV
Sbjct: 124 MPRATRYIDQMIAMIEDLIAKGHAYEAEGHVLFAVDSWRDEYGRLSGRSVDDMIAGARVE 183
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+KKNP DF+LWK S PGWESPWGRGRPGWHIECSAMS LG+ FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDL 243
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA + A W+HN L +EG+KMSKS GNF T+++LL+ +
Sbjct: 244 MFPHHENEIAQSKCAHPHGEFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD------Q 297
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYN 357
P VIR L THYR+P+D+T ++ EAE+ L KW PAV+ AL +
Sbjct: 298 GVPGEVIRFVFLQTHYRKPMDWTEKKAREAEVTLRKWRALTAGIEPAASAAPAVIEALAD 357
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-----VCKEHLNKNISIAIEKL 412
DLNT A+ LH LA ASA +LG+ E ++S ++L
Sbjct: 358 DLNTAGALAELHHLASVG-----DAAALLASARVLGLLEPDMGAWAETDGVDLSAHADRL 412
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ R ++ K FS D ++ + G + K+
Sbjct: 413 ARVRAEAMQTKDFSEVDRLKAAYLAAGLEVRMSKDGVELVPG 454
>gi|255548846|ref|XP_002515479.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223545423|gb|EEF46928.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 563
Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 172/501 (34%), Positives = 256/501 (51%), Gaps = 68/501 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YNT+ R F+ + MYVCG T YD +HIG+AR + FDVLYR L++ +
Sbjct: 70 ELYLYNTMSRNKDLFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLYRYLKHLGYD 129
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN TD+DDKII RA + + + ++ + ++F D L CL P+ +P
Sbjct: 130 --VCYVRNFTDVDDKIIARANE------LGEDPISLSRRYCEEFHNDMVYLHCLPPSIEP 181
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
++H+PQ+I +I+ I+ +G AY + ++ F P YG S RK+++ + G RV
Sbjct: 182 CVSDHMPQIINMIKQILDNGCAYRIDGDVYFSIDGYPEYGKLSGRKLEDNRAGERVAVDS 241
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNPADF LWK + EP WESPWG GRPGWHIECSAMS+ YLG FDIHGGG+DL+FP
Sbjct: 242 RKKNPADFALWKSAKEGEPFWESPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFP 301
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSC A + W+HNGF+ + KMSKS GNF TI ++++ +
Sbjct: 302 HHENEIAQSCAAC-RGSNISYWVHNGFVTINSEKMSKSLGNFFTIRQVIDL-------YH 353
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
+R +L THYR P++++ +L A + QT
Sbjct: 354 PLALRFFLLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCETVISQHETAFEKDSVPSD 413
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASA 389
++++ +DL+T + AL + L I +
Sbjct: 414 TLDGINKFSDVFVTSMSDDLHTPVLLAALSDPLKIINDMLHTRKRIQSLAALEKIVRDAL 473
Query: 390 HILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ EV ++ K + + + ++ER + K + + +D IRK L +
Sbjct: 474 SVLGLMPTTYSEVLQQLREKALRRAKLTEEQVLQRIEERTVARKNRDYERSDAIRKDLAT 533
Query: 438 KGFILEDYKNPDNGQRMTRWK 458
G L D + T W+
Sbjct: 534 HGIALMDSPD------GTSWR 548
>gi|323343623|ref|ZP_08083850.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
gi|323095442|gb|EFZ38016.1| cysteine--tRNA ligase [Prevotella oralis ATCC 33269]
Length = 496
Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 162/502 (32%), Positives = 238/502 (47%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL RK F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQRLVIYNTLSRKKEVFKPLHAPNVGMYVCGPTVYGAPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYANSYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +PRAT HI + L+ I+ +G+AYE+N I FD YG S
Sbjct: 113 MDALNVLPPSIEPRATGHIIEQEELVNEILKNGYAYESNGSIYFDIEKYNRKHRYGILSG 172
Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ +R E K N ADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVINNSRALEGVEEKHNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
IT+ + + + +++ IR +L HYR +DF+ + L + +
Sbjct: 292 ITLEQFFKGTHESLSQAYSPMTIRFFILSAHYRGTVDFSNEALIASAKGFDRLMTGIADI 351
Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
G + A+ +DL T + I L + D +A
Sbjct: 352 ARVPVSSESDEAVKQFVGELRQKCYDAMNDDLQTPTVISNLFEACHVINSLLDHKARISA 411
Query: 388 -------------SAHILGIEVCKEHLNKNISI----AIEKLVQERLILLKMKKFSSADY 430
+ ILG++ K N ++ ++ R + K ++++D
Sbjct: 412 TDLADLADTMHLFALDILGLKSEKGINNDAREASYGKVVDMVLALRAKAKQNKDWTTSDQ 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 472 IRDALAEAGFEVKDTKDGVTWK 493
>gi|299143767|ref|ZP_07036847.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
gi|298518252|gb|EFI41991.1| cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 386 str. F0131]
Length = 465
Score = 364 bits (933), Expect = 2e-98, Method: Composition-based stats.
Identities = 169/489 (34%), Positives = 245/489 (50%), Gaps = 59/489 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK EF+ + + MY CGPTVY++ H+GNARP+ VFD L R Y +
Sbjct: 1 MRLYNTLTRKKEEFKPLKDGLVTMYNCGPTVYNYIHVGNARPLTVFDTLRRYFIYKGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
V +V N TDIDDK+I +A E ++ + + + ++F D L T P
Sbjct: 60 -VKFVVNFTDIDDKLINKANAEGITV------AEVAERYIKEFKVDANGLHLYDYETLNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI Q+I IQ +I AY + ++ FD +S +YG S +K+++ G RV
Sbjct: 113 RATEHINQIIDFIQILIDKNAAYVSEGDVYFDINSAKDYGKLSHKKLEDLISGARVDVSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNPADF LWK EP W +PWG GRPGWHIECS M+ LG+ DIH GG DL FP
Sbjct: 173 IKKNPADFALWKAKKEGEPYWTAPWGEGRPGWHIECSVMAKTLLGETIDIHSGGEDLQFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + + A W+HNG + ++ KMSKS GNF T+ E+ +
Sbjct: 233 HHENEIAQSETCNGV-PFAKFWLHNGMITVDNEKMSKSKGNFFTVREV-------SEEFN 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------- 356
V+R +L HYR PI+F+ + + + + L + + +
Sbjct: 285 LEVLRFFLLGCHYRSPINFSREIMEQTKNGLERIYNAKYKLEEFLENCIDREFSDEDKKQ 344
Query: 357 ----------------NDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAH 390
+D+NT AI A++ + + ++ +
Sbjct: 345 LGIIADEIKFFEESMEDDINTADAITAIYNIVKFINIELNEDSNKKLVDEIYNTLLRLSK 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LGI + +NI +E+L++ER K K F AD IR L SK ++ED +
Sbjct: 405 VLGILELE---RENIDEEVERLIKEREDARKNKDFKRADEIRDILASKNILIEDTRT--- 458
Query: 451 GQRMTRWKQ 459
T+WK+
Sbjct: 459 ---GTKWKR 464
>gi|325526735|gb|EGD04251.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 465
Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 247/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIDAMHADEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATLFIPQMLGMIEKLEANGYAYQASDGDVNYSVRKFRNYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 ASNDAKEDPLDFVLWKRAKPEDPEGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDTLALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGALAADEIEARIAARVAAKQAKDYAEADRIRAELLEAGVALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|256849116|ref|ZP_05554549.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
gi|256713892|gb|EEU28880.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
Length = 477
Score = 364 bits (933), Expect = 3e-98, Method: Composition-based stats.
Identities = 165/494 (33%), Positives = 249/494 (50%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL RK EF+ + P +I MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 5 RVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + K F+ DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I +I ++++I +G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDTE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK P E GW+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
R V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLAYDTASEESA 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFNA 387
+ A+ +D N +A+ A++ L + + +
Sbjct: 349 ELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLAS 408
Query: 388 SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G++ K + I+ LV++R K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|227879317|ref|ZP_03997183.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
gi|262047597|ref|ZP_06020552.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
gi|227861086|gb|EEJ68739.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus JV-V01]
gi|260572173|gb|EEX28738.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
Length = 477
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 165/494 (33%), Positives = 249/494 (50%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL RK EF+ + P +I MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 5 RVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + K F+ DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I +I ++++I +G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDTE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK P E GW+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QSRKEDPIDFALWKAQKEPDEIGWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
R V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTVTNINYRLADDTASEESA 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFNA 387
+ A+ +D N +A+ A++ L + + +
Sbjct: 349 ELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLAS 408
Query: 388 SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G++ K + I+ LV++R K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|145633713|ref|ZP_01789439.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
gi|144985473|gb|EDJ92294.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 3655]
Length = 459
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 175/495 (35%), Positives = 250/495 (50%), Gaps = 74/495 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S E W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENELSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L + +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVAFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDTEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 402 --NKNISIAIEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDY 445
+ + IE L+++R +L + G +LED
Sbjct: 405 GSDDDEVAKIEALIKQRNEARAAKDWAAADAAR--------------NELTAMGIVLEDG 450
Query: 446 KNPDNGQRMTRWKQK 460
N T W+++
Sbjct: 451 AN------GTTWRKQ 459
>gi|294777611|ref|ZP_06743062.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
gi|319640202|ref|ZP_07994928.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
gi|294448679|gb|EFG17228.1| cysteine--tRNA ligase [Bacteroides vulgatus PC510]
gi|317388189|gb|EFV69042.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
Length = 493
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 165/499 (33%), Positives = 246/499 (49%), Gaps = 56/499 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F + ++ MYVCGPTVY AH+G+ARP I FD+L R L +
Sbjct: 1 MENKLTIYNTLSRQKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDILLRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVEEILKNGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L + +
Sbjct: 292 INLDEFFHGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLTEAVKGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-- 387
I P +A+ +DLN+ I L AR D +A
Sbjct: 352 ERITPATQTTGIEGVKDLREKCYTAMNDDLNSPIVIAHLFDGARMINTVLDKKATISAED 411
Query: 388 -----------SAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + ++ L+++R+ K ++++D IR
Sbjct: 412 LEELKSVFHLFMYEILGLKEEAANNEAREEAYGKVVDMLLEQRMKAKANKDWATSDKIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 ELAALGFEVKDTKDGFTWK 490
>gi|56696997|ref|YP_167359.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
gi|61216118|sp|Q5LRJ6|SYC_SILPO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56678734|gb|AAV95400.1| cysteinyl-tRNA synthetase [Ruegeria pomeroyi DSS-3]
Length = 465
Score = 363 bits (932), Expect = 3e-98, Method: Composition-based stats.
Identities = 209/448 (46%), Positives = 267/448 (59%), Gaps = 24/448 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R EF IDP N+RMYVCGPTVYD AH+GN RP++VFDVLYRLLR+ YG
Sbjct: 4 IKLHNTRTRTKEEFVPIDPDNVRMYVCGPTVYDRAHLGNGRPVVVFDVLYRLLRHVYGAD 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA + I IT++ TQ F+ D L L P H PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAERG------RPIGDITAETTQWFLDDMGALGALEPDHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-SFSRRKIDEQKMGTRVPEKY 183
AT +IPQM+ +I+ ++ GHAYEA ++F S + S R +D+ G RV
Sbjct: 118 ATQYIPQMVAMIEELVAKGHAYEAEGHVLFAVDSWKEHYGKLSGRSVDDMIAGARVEVAP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKNP DF+LWK STP PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSTPDLPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHGGGNDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA AN W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 238 HHENEIAQSCCAHPEGHFANFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----PAVLSALYNDL 359
VIR L THYR+P+D+T ++ EAE L KW + + ++ P + AL +DL
Sbjct: 292 GEVIRFVFLSTHYRKPMDWTEKKAKEAEATLRKWWRLTAPLDEMEIKPSPQFIDALTDDL 351
Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHI-----LGIEVCKEHLNKNISIAIEKLVQ 414
NT AI LH+LA+E K++ L + G+ + + A L +
Sbjct: 352 NTPGAIAELHRLAKE--KDYAALEAGLEMLGLQETVNFGVASFGFSTSVEVLEAANDLAR 409
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFIL 442
+ K F AD ++K G L
Sbjct: 410 RWMAYRDAKNFEEADRLKKSALLAGVDL 437
>gi|88941991|sp|Q65UY1|SYC_MANSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 458
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 178/493 (36%), Positives = 247/493 (50%), Gaps = 73/493 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I+P+ + MYVCG TVYD H G+ R + FDV+ R LRY +
Sbjct: 1 MLKIFNTLTREKEEFKPINPNKVGMYVCGVTVYDLCHFGHGRTFVSFDVITRYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
YVRNITD+DDKII+RA + N+ + + + KD L L P +P
Sbjct: 61 L--RYVRNITDVDDKIIKRALEN------NETCDQLVERMIAEMHKDFDALNILRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP++I +++ +I GHAY + +++FD S YG+ SR+ +++ + G RV K
Sbjct: 113 RATKHIPEIIAMVETLIRRGHAYVAEDGDVMFDVESFQKYGALSRQNLEQLQAGARVEIK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S P EP W+SPWG+GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 SVKKNPMDFVLWKMSKPNEPSWDSPWGKGRPGWHIECSAMNDKELGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA E N W+H G L + KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHDGE-YVNYWLHTGMLTINEEKMSKSLNNFFTIRDILT-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
A +R L YR +D++ + + A L + ++
Sbjct: 285 DAESVRYFFLTAQYRSLLDYSEENIGLARKALERLYTALRGCETVEIPAEDQYVIDFKTA 344
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---NK 403
+ +D NT A+ L +LARE K + L A +LG+
Sbjct: 345 MDDDFNTPGALAVLFELAREINKLKTEDQTKANQLASRLKQLAGVLGLLEQAPETFLQGD 404
Query: 404 NISIA---IEKLVQERLI--------------LLKMKKFSSADYIRKQLESKGFILEDYK 446
IE L++ R +L + G +LED
Sbjct: 405 AADAEVSKIEALIKRRNEARAAKDWAAADAAR--------------NELTAMGVVLED-- 448
Query: 447 NPDNGQRMTRWKQ 459
G + T W++
Sbjct: 449 ----GAKGTTWRK 457
>gi|198275421|ref|ZP_03207952.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
gi|198271757|gb|EDY96027.1| hypothetical protein BACPLE_01584 [Bacteroides plebeius DSM 17135]
Length = 493
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 159/497 (31%), Positives = 239/497 (48%), Gaps = 55/497 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IYNTL RK F + ++ MYVCGPTVY H+G+ARP I FD+++R L +
Sbjct: 3 NNQLFIYNTLTRKKELFVPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDIVFRYLTHLG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 63 Y--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLLRYHKAM 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + S R
Sbjct: 115 EALNVLPPSIEPHASGHIIEQIKLVEEILKNGYAYESKGSVYFDVAKYNKDHHYGVLSGR 174
Query: 169 KIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+D+ + + K NPADF LWK + P W SPW G PGWH EC+AM Y
Sbjct: 175 NLDDVLNTTRELDGQDEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHCECTAMGRKY 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL+FPHHE EIAQ+ ++ + W+HN + + G+KM KS GNFI
Sbjct: 235 LGETFDIHGGGMDLVFPHHECEIAQAVASEG-HQMVRYWMHNNMITINGQKMGKSLGNFI 293
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T++E K +++ IR +L HYR +DF+ + L AE L + + +
Sbjct: 294 TLDEFFTGSNKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLLEGVKNLD 353
Query: 346 IIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
I P A+ +DLNT I L R D +A
Sbjct: 354 RITPAKATSGIEPKGLREKCYEAMNDDLNTPIVISHLFDATRMINTVIDKKAAISAEDLE 413
Query: 388 ---------SAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ E+ ++ L+++R+ K ++++D IR L
Sbjct: 414 ELKSVFHLFVFDILGLKAEAENNAAREEAYGKVVDMLLEQRMQAKANKDWATSDKIRDNL 473
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 474 AALGFEVKDTKDGFTWK 490
>gi|319898705|ref|YP_004158798.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
gi|319402669|emb|CBI76215.1| Cysteinyl-tRNA synthetase [Bartonella clarridgeiae 73]
Length = 502
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 219/503 (43%), Positives = 297/503 (59%), Gaps = 51/503 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K++ YNTL RK +F+ ID + +R+YVCGPTVYD+AHIGNAR +I+FDVL+RLLR+ YGE
Sbjct: 3 KLRFYNTLTRKKEDFKPIDATKVRLYVCGPTVYDYAHIGNARSVIIFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITD+DDKI +A ++P + +N+AI +T + QF +DT L CL PT QP
Sbjct: 63 NHVIYARNITDVDDKINAKAALQYPDLELNNAIHQLTEYTSYQFQQDTLALGCLQPTSQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ ++ LI+ ++ G+AY A++ I+F SS+ P YG F++R +DE + G R+
Sbjct: 123 RATDHLEEIRSLIERLLEKGYAYIADDHILFSVSSMGDNPRYGMFAKRSLDEMRAGARID 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM--------------S 223
+KK DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 183 VASYKKGEMDFVLWKPSAQGEPGWTSPAGISVLGRPGWHIECSAMSMAKLLSPYGGGLVC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+FDIHGGG DLIFPHHENEIAQSC E+ AN WIHNGFL +EG+KMSKS G
Sbjct: 243 EDPTANIFDIHGGGSDLIFPHHENEIAQSCSVFGTERMANFWIHNGFLQVEGKKMSKSLG 302
Query: 284 NFITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NFITI LLE K R W IR +ML THYREP+++T+QRL ++ L
Sbjct: 303 NFITIRSLLENDFFEFANVLSKEVKRIWAGLSIRFSMLQTHYREPLNWTMQRLVKSSSEL 362
Query: 335 SKWP-------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+W S + +D +++ L ND+NT + I L K +E
Sbjct: 363 YRWYELLRREKYYSDNNQSVDSSLIETLSNDINTSNTITILRKFYKEQN-----AVALAH 417
Query: 388 SAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
LG+ + K I++ + ERL L+ K++++AD IR +L +
Sbjct: 418 GMDFLGLLRQELVKKKECPLFISKMHFDLQFIDQRIAERLCLIHNKEWAAADKIRDELAA 477
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G L+D K+P G+R+T W+ K
Sbjct: 478 GGIFLKDSKDPQTGERITTWEMK 500
>gi|325954818|ref|YP_004238478.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
gi|323437436|gb|ADX67900.1| cysteinyl-tRNA synthetase [Weeksella virosa DSM 16922]
Length = 489
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 161/492 (32%), Positives = 236/492 (47%), Gaps = 52/492 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++K+YN+L + +F I+ + MYVCGPTVY H+GN R + FD++YR L
Sbjct: 4 QHQLKVYNSLSGQKEKFVPINKEFVGMYVCGPTVYSHVHLGNVRTFMSFDMIYRYLLLLG 63
Query: 62 GEKCVTYVRNITDI--------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V YVRNITD+ +DKI ++AR E I K T F +
Sbjct: 64 Y--KVRYVRNITDVGHLLDDSDEDKIAKKARLEKVE------PMEIVQKYTVDFHDVLRK 115
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRK 169
P +P AT HI + I + + +I G AYE+N + FD NYG S R
Sbjct: 116 FNNHPPNVEPTATGHIVEQIVITKELIEKGLAYESNGSVYFDVKKYNEKGGNYGELSNRN 175
Query: 170 IDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
I++ TR + + +NP DF LWK++ P W SPWG G PGWH+EC+ MS+ YL
Sbjct: 176 IEDLMANTRTLDGQDEKRNPQDFALWKKALPDHIMRWPSPWGEGFPGWHLECTVMSTKYL 235
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G+ FDIHGGG+DL FPHHE EIAQ+ A E W+H L L G+KMSKS GN I
Sbjct: 236 GEQFDIHGGGMDLKFPHHECEIAQAKGAYGQEP-VKYWLHANMLTLNGQKMSKSTGNTIL 294
Query: 288 INELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
ELL F + + VIR M+ HYR +DF+ + + +E ++ + +
Sbjct: 295 PEELLSGNNSFFDKGFSPMVIRFFMMQAHYRSILDFSNEAILASEKGYTRLMEAYKTIPS 354
Query: 347 IDPAV-------------LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIF 385
I+P A+ +D NT I L + N + L +
Sbjct: 355 IEPNATSTFDVKAFETKLYEAMDDDFNTPILIAHLFDAVKIINSLKEGTETLNTEDLALL 414
Query: 386 NASAH-----ILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ +LG++ + + + ++ L++ R K ++ +D IR +L S
Sbjct: 415 QKIMNDFVVKVLGLKEEETSSDSTHKLDGVLQMLIEMRNQARVDKNWTLSDQIRDELSSL 474
Query: 439 GFILEDYKNPDN 450
G L+D K+
Sbjct: 475 GIQLKDSKDGTT 486
>gi|319408293|emb|CBI81946.1| Cysteinyl-tRNA synthetase [Bartonella schoenbuchensis R1]
Length = 502
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 214/505 (42%), Positives = 289/505 (57%), Gaps = 55/505 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ YNTL RK F ID + +R+YVCGPTVYD+AHIGNAR +IVFD+L+R LR+ YGE
Sbjct: 3 NLRFYNTLTRKKENFTPIDAAKVRLYVCGPTVYDYAHIGNARSVIVFDILFRFLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITD+DDKI RA ++P + +NDAI +T QF KDT L CL PT QP
Sbjct: 63 DHVIYARNITDVDDKINARAIHKYPELALNDAIRQLTECTYDQFQKDTEALGCLLPTSQP 122
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS---SIPNYGSFSRRKIDEQKMGTRVP 180
RAT+H+ ++ LI+ ++ GHAY A N I+F S P YG F++R +DE + +R+
Sbjct: 123 RATDHLEEIRSLIERLLEKGHAYIAGNHILFSISSMGEYPRYGEFAKRSLDEMRADSRID 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRG---RPGWHIECSAM--------------S 223
+KK DF+LWK S EPGW SP G RPGWHIECSAM
Sbjct: 183 IAIYKKEKMDFVLWKPSQEWEPGWPSPAGIPGLGRPGWHIECSAMSMAKLLAPYGGGLNC 242
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
VFDIHGGG+DL+FPHHENEIAQSC A ++ AN W+HNGFL +EG+KMSKS G
Sbjct: 243 DDLAANVFDIHGGGIDLLFPHHENEIAQSCSAFGTKRMANFWMHNGFLQVEGKKMSKSLG 302
Query: 284 NFITINELLETK---------KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
NFITI LLE+ ++W IR +ML THYREP+++T RL ++ L
Sbjct: 303 NFITIRSLLESDFLEFNDALTDEIRQNWAGLSIRFSMLQTHYREPLNWTTHRLAQSSSEL 362
Query: 335 SKWPQTSTS-------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+W + ID ++++ L +DLNT +A L K +E
Sbjct: 363 YRWYEFLRCEKCCLDDDKSIDESLINTLSDDLNTSNAFTILRKFYKEGNAI-----ALAR 417
Query: 388 SAHILGIEVCKEHLNKNIS------------IAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ G+ ++ + I I++ + ERL L+ K++ +AD IR +L
Sbjct: 418 GMDLFGLL--RQEWVQEIECPLFVRKTYLDLKFIDQRIAERLQLIHNKEWEAADKIRDEL 475
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
G L+D K+P G+R+T W+ K
Sbjct: 476 AVGGISLKDEKDPQTGERITTWEIK 500
>gi|328462973|gb|EGF34781.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
Length = 473
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 169/494 (34%), Positives = 251/494 (50%), Gaps = 61/494 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 1 MKVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDK+I A E ++P + K F++DTT L T PR
Sbjct: 59 KVKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+ I ++I +Q +I G+AYE++ ++ + +YG S + I+ + G
Sbjct: 113 ATHEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDE 172
Query: 185 KKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R M YR I+++ + L +A +L ++ T +
Sbjct: 287 --KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDS 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
+ A+ +D N +A+ A++ L N + +
Sbjct: 345 DELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLS 404
Query: 387 ASAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
A + GI+ K + + + I++LV++R K K ++++D IR QL+ G ++D
Sbjct: 405 AWLLVFGIDTEKLCSQSADSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT 464
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 465 ------PQGTRWTR 472
>gi|323700147|ref|ZP_08112059.1| cysteinyl-tRNA synthetase [Desulfovibrio sp. ND132]
gi|323460079|gb|EGB15944.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans ND132]
Length = 485
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 241/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL+R+ EF +++ MYVCG T YD HIG+AR +VFDVLYR L++ +
Sbjct: 1 MRLYNTLKRRKEEFTPAHNNDVNMYVCGITAYDLCHIGHARSSVVFDVLYRYLKHEGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN TDIDDKII+RA + S I K +F D RL P+ +P+
Sbjct: 60 -VNFIRNFTDIDDKIIKRANEVGKEA------SEIAEKFIGEFYVDMDRLNIERPSVEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HIP+MI L Q +I GHAY + ++ F S YG S R IDE + G R+
Sbjct: 113 CTEHIPEMIALTQRLIDKGHAYATPSGDVYFKVRSFEGYGKLSGRNIDELESGARIAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG+GRPGWH+ECSAMS Y DIHGGG DL FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPFWESPWGKGRPGWHLECSAMSEKYADLPLDIHGGGQDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS A + AN W+HNGF+ + KMSKS GNF TI ++L +
Sbjct: 233 HHENEVAQSEAATG-KPFANYWVHNGFVQINSEKMSKSLGNFFTIRDILA-------KFL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
+R +L HYR P+DF+ L EAE L +
Sbjct: 285 PETLRYFLLTMHYRSPLDFSFDALEEAEKGLKRIYSALNQIDEELARDKWKKSPFPEELV 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLPIFNA-- 387
++ A+ +DLNT A+ + R+S DL A
Sbjct: 345 KELDDLEKHFAEAMADDLNTAGALGHVFSAIRLAGRVAEDKNLRKSEGGRDLFARIKADM 404
Query: 388 --SAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A +LGI K + +L+ R K K F+ +D IR
Sbjct: 405 ADWASVLGIFERKPAEFLLELRDSRAARAGIDPAKVRELLDARAQARKDKDFARSDAIRD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + + D
Sbjct: 465 ELAAMQVEVHDTPQGATWD 483
>gi|148244266|ref|YP_001218960.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
gi|146326093|dbj|BAF61236.1| cysteinyl-tRNA synthetase [Candidatus Vesicomyosocius okutanii HA]
Length = 462
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 178/484 (36%), Positives = 261/484 (53%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL ++ F I+ + + +YVCG TVYD+ H+G+AR +++FDV+ R LR ++
Sbjct: 1 MLKIYNTLSKQKEIFHPINNNKVGIYVCGMTVYDYCHMGHARVLVMFDVITRHLRRHF-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + I +T++ +D L L P +P
Sbjct: 59 SNVEYVRNITDIDDKIIKRAVENK------EDIYTLTNRFINAMHEDEHALGILPPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RATN + Q+ +I+++I G AY+ N ++ + NYG FSR+ +++ ++G R+ +
Sbjct: 113 RATNTMEQIFCMIKSLIEKGFAYQAHNGDVYYSVRHFKNYGKFSRKNLNKLEIGARIKVE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK S P EP W SPWG+GRPGWHIECSAMS+H+LG FDIHGGG+DL F
Sbjct: 173 SAKKDPLDFVLWKMSKPNEPSWSSPWGKGRPGWHIECSAMSTHHLGNHFDIHGGGMDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ NIW+H GF+N+ +KMSKS NF TI +L +++
Sbjct: 233 PHHENEIAQSEGANNC-TFVNIWMHVGFVNINNKKMSKSLNNFFTIRNVL-------KNY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDP 349
++R ++ +HY P++F+ + L +A+ LS+ T
Sbjct: 285 NGEILRYFIMSSHYHSPLNFSDENLNKAKSSLSRLYTTIRGLNTSNVRTEEISIHFDYSV 344
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV----- 396
AL +D NT A+ L +LA+ + L + +GI
Sbjct: 345 RFNEALDDDFNTPIALSVLFELAKIVNIQRENNTDQAKTLAQLLKKLGGYIGILQMNADK 404
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ I + R K F+ +DYIR +L ILED N T
Sbjct: 405 FLKQGISLSDEQINIKITNRNKARINKDFTLSDYIRDELAKFDIILEDNIN------GTT 458
Query: 457 WKQK 460
W++K
Sbjct: 459 WRKK 462
>gi|294675457|ref|YP_003576073.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
gi|294474025|gb|ADE83414.1| cysteine--tRNA ligase [Prevotella ruminicola 23]
Length = 496
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 159/502 (31%), Positives = 230/502 (45%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ IYNTL R+ F+ + N+ MYVCGPTVY H+G+ARP I FD+++R L++
Sbjct: 1 MESKLVIYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDLVFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEIAQYYTNRYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P AT HI + L+Q I+ +G AYE+N I FD +
Sbjct: 113 MDALNVLRPSIEPHATGHIIEQQQLVQQILDNGFAYESNGSIYFDIEAYNKKFQYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + + K+N ADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RSLENVKDASRELDGVGEKRNQADFALWKKAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQ+ + W+HN L + G+KM KS NF
Sbjct: 233 YLGEEFDIHGGGMDLVFPHHECEIAQAQASMG-HPAVKYWMHNNMLTINGQKMGKSYNNF 291
Query: 286 ITINELLETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + + IR +L HYR +DF+ + L AE L K
Sbjct: 292 ITLEQFFTGNHPLLKKAYSPMTIRFFVLSAHYRGTVDFSNEALEAAEKGLEKMMNAIADL 351
Query: 345 G-----------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+ A+ +DL T I L + K D A
Sbjct: 352 ERVQVADKCDAETEKVVKALRQKCYDAMNDDLATPQVISYLFEACTVVNKLTDHKATICA 411
Query: 388 SA-------------HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
ILG++ K N A ++ +++ R K ++++D
Sbjct: 412 DCLQELKETMHLFAEDILGLKAEKSGTNDEREAAFGKVMDMVLELRAKAKADKDWATSDK 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR +L + GF ++D K+ +
Sbjct: 472 IRDELAAAGFEVKDTKDGVTWK 493
>gi|303244169|ref|ZP_07330507.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
gi|302485554|gb|EFL48480.1| cysteinyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
Length = 476
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 183/496 (36%), Positives = 256/496 (51%), Gaps = 62/496 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL +K EF +ID ++MYVCGPTVYD+AH+G+ R +VFD + R L +
Sbjct: 1 MKIYNTLTKKKEEFNSIDEHEVKMYVCGPTVYDYAHLGHGRTYVVFDTIRRYLEHKNY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII+RA +E N + + K + F++D +L PR
Sbjct: 59 IVKLVINFTDIDDKIIKRANEE------NIPPTELADKFIKSFLEDMEKLNIKPAYVYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ HI +I I+ +I G+AY A++ I FD +YG S +DE + G R+
Sbjct: 113 VSEHIKDIIRFIEVLIKKGYAYVADDGIYFDVRKFKDYGKLSNINLDEIRTGYRIETNLT 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF LWK + P EP W+SPWG GRP WHIECSAM YLG+ FDIHGGG DLIFPH
Sbjct: 173 KRNPEDFALWKFAKPNEPKWDSPWGEGRPAWHIECSAMGIKYLGEQFDIHGGGNDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + WIH GF+ ++ KMSKS GNF+ + +LL+ +
Sbjct: 233 HENEIAQSEVYTDKKPWVKYWIHTGFVMMDKEKMSKSLGNFVELKDLLD-------KYDF 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
VIRL +L HYR P+D++ + L +A+I L K T + I
Sbjct: 286 EVIRLFLLQRHYRSPLDYSEEGLLDAKISLEKLYNTLKNIDAICRNSHVKHKLNEIDIKT 345
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------PIFNAS 388
+A+ +D NT A++ + +++ K + F
Sbjct: 346 YETIKNAWINFYNAMDDDFNTPEALKYVFEVSSVINKYMNESNNPNKSLLIMTNEFFKMI 405
Query: 389 AHILGIE----VCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
I GI K + +KN+ I+ L+ R L + K + AD IR +L++ G LE
Sbjct: 406 GEIFGIFHNIINNKNNEDKNMEGHLIDILINIRAKLKEEKNYKLADEIRSELKNIGIQLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + T WK+
Sbjct: 466 DS------PKGTIWKK 475
>gi|42569504|ref|NP_565717.2| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
ligase/ nucleotide binding [Arabidopsis thaliana]
gi|330253408|gb|AEC08502.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 563
Score = 363 bits (931), Expect = 4e-98, Method: Composition-based stats.
Identities = 182/508 (35%), Positives = 262/508 (51%), Gaps = 74/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K++ ++NT+ RK F+ + MYVCG T YD +HIG+AR + FDVL R L++
Sbjct: 63 KELWLHNTMSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V+YVRN TD+DDKII RA++ + + ++ + ++F +D +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARAKE------LEEDPISLSRRFCEEFNRDMEQLQCLDPSVQ 174
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++HIPQ+I LI+ I+ +G+AY+ + +I F P YG S RK+++ + G RV
Sbjct: 175 PRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+PADF LWK + EP WESPWGRGRPGWHIECSAMS+ YLG FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSC A + WIHNGF+ ++ KMSKS GNF TI ++++ +
Sbjct: 295 PHHENEIAQSCAACD-SSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------Y 346
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+RL ++ THYR PI+++ L A + QT
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPS 406
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLL 382
++++ +DL T + A+ + + L
Sbjct: 407 DTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALE 466
Query: 383 PIFNASAHILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADY 430
ILG+ EV ++ K + + + VQER K K++ +D
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDA 526
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IRK L G L D T W+
Sbjct: 527 IRKDLAKVGIALMDS------PEGTTWR 548
>gi|270339596|ref|ZP_06005360.2| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
gi|270334442|gb|EFA45228.1| cysteine-tRNA ligase [Prevotella bergensis DSM 17361]
Length = 498
Score = 363 bits (931), Expect = 5e-98, Method: Composition-based stats.
Identities = 162/502 (32%), Positives = 239/502 (47%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK+ + +YNTL R F+ + N+ MYVCGPTVY H+G+ARP I FDVL+R L++
Sbjct: 3 MKQNLLVYNTLTRSKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLKHL 62
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V YVRNITD+ +DKI ++AR E I T ++ K
Sbjct: 63 GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEIAQHYTNRYHKA 114
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD + S
Sbjct: 115 MEALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVAKYDKDHKYGILSG 174
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + +R +K DF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 175 RNLTDIINNSRELSGTDEKRNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 234
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE EIAQ+ + E+ W+HN + + G+KM KS GNF
Sbjct: 235 YLGDHFDIHGGGMDLVFPHHECEIAQAVASQG-EQMVRYWMHNNMITINGQKMGKSLGNF 293
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + +++ IR +L HYR +DF+ L A+ L K
Sbjct: 294 ITLEQFFNGDHESLEQAYSPMTIRFFILSAHYRGTVDFSNDALKAAKKGLEKLMTGIADL 353
Query: 345 GIIDPAV-----------------LSALYNDLNTVSAIQALHKLAREST---------KN 378
I P+ A+ +DL T I AL +
Sbjct: 354 DRIQPSKGSQPDTAKFVKALRQRLYDAMNDDLQTPLVISALFEACHLVNLLLDHKTKISE 413
Query: 379 HDLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
DL + + +LG++ + N+ A +E +++ R + K ++++D
Sbjct: 414 DDLKELSDTMHVFTFDLLGLQNEQGESNEVREEAYGKVVEMVLKLRQQAKEAKDWATSDE 473
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 474 IRDALAEAGFEVKDTKDGVTWK 495
>gi|333029518|ref|ZP_08457579.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
gi|332740115|gb|EGJ70597.1| cysteinyl-tRNA synthetase [Bacteroides coprosuis DSM 18011]
Length = 491
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 164/497 (32%), Positives = 245/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++ IYNTL RK F + ++ +YVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MDHQLTIYNTLSRKKELFVPLHAPHVGLYVCGPTVYGDAHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ KD
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVVQYYLNRYHKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD + +YG S
Sbjct: 113 MEELNVLPPSIEPHASGHIIEQIQLVKEILKNGYAYESQGSVYFDVAKYDKKYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKAAQPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLIFPHHECEIAQSVASQGND-MVHYWMHNNMITVNGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + + +++ IR +L HYR +DF+ + L +E L +
Sbjct: 292 ITLEQFFDGSHELLLQAYSPMTIRFFILQAHYRSTVDFSNEALIASEKGLERLFDAVHRL 351
Query: 345 GI-------------IDPAVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
+ + A+ +DLNT I L A+
Sbjct: 352 DALKVSKTSDVDVKGLKAKCIEAMNDDLNTPIVISHLFDGAKIINNIFAGNNTISAEDLE 411
Query: 380 DLLPIFN-ASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L FN ILG++ + ++ L+++RLI + K ++++D IR +L
Sbjct: 412 ELKDTFNLFLFDILGMKTENSSSGDREAAYSKVVDMLLEQRLIAKQNKDWATSDQIRDEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
S GF ++D K +
Sbjct: 472 TSLGFEIKDTKEGSEWK 488
>gi|326693476|ref|ZP_08230481.1| cysteinyl-tRNA synthetase [Leuconostoc argentinum KCTC 3773]
Length = 470
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 160/485 (32%), Positives = 231/485 (47%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNTL R+ F+ + P + MYVCGPTVY++ HIGNAR I FDV+ R Y
Sbjct: 1 MIQVYNTLSREKEVFKPLTPGKVSMYVCGPTVYNYIHIGNARSAIAFDVIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+RAR+E I +K F DT L T +
Sbjct: 60 -TVKYVSNFTDVDDKIIKRAREEGVDE------MTIANKYADAFHADTLPLNIKPATIRS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP +I +Q++I G+AYE+ ++ F YG + + + E
Sbjct: 113 RATEVIPDIITFVQDLIDKGYAYESAGDVYFRAKQFKGYGILAHQDLTEMAANAAGRLDD 172
Query: 184 HKKNPA----DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
++ DF +WK S + W SPWG GRPGWHIECS MS YLGK D+HGGG+
Sbjct: 173 AEQIRKEDPIDFAVWKASRDTDKISWASPWGNGRPGWHIECSVMSQKYLGKTIDVHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS +K N W+HNGF+N++ KMSKS GNF T++++L
Sbjct: 233 DLAFPHHTNEIAQSEARTG-QKFVNYWLHNGFVNVDNEKMSKSLGNFTTLHDMLTDYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-----------AEILLSKWPQTSTSKGII 347
IR + THYR PI++ L + L + +
Sbjct: 290 ----DPMAIRYLLATTHYRRPINYAPDTLAQARAALERIRTGYRNLQFRLADAVPGQDTA 345
Query: 348 DPAVLSA--------LYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
+ + +D N +A+ A+ +L + + LL
Sbjct: 346 LETTIQQQVEAFELAMDDDFNVPNAVAAIFELITLANTYAEATTVYDNTVKTLLTTIETL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LGI+ ++++ +L+ R I + + ++D +R QL++ G I+ED
Sbjct: 406 MGVLGIDGL--SGTSDLTVEQRRLIDARAIARTSQDYQTSDELRDQLKTLGIIIEDTPQG 463
Query: 449 DNGQR 453
R
Sbjct: 464 QRWHR 468
>gi|305664986|ref|YP_003861273.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
gi|88707398|gb|EAQ99643.1| cysteinyl-tRNA synthetase [Maribacter sp. HTCC2170]
Length = 493
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 152/493 (30%), Positives = 232/493 (47%), Gaps = 53/493 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++K+K+ N+L K +F+ I+ +I MYVCGPTVY H+GN R + FD+++R ++
Sbjct: 6 EQKLKVSNSLTGKKQDFEPINEGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLG 65
Query: 62 GEKCVTYVRNITD----ID------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D DKI ++AR E + + T F
Sbjct: 66 Y--KVRYVRNITDAGHLVDDADEGEDKIAKKARLEKIE------PMEVVQRYTVDFHNIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
+ L P+ +P AT HI + + +I+ I+ AYE N + FD YG S R
Sbjct: 118 DQFNFLPPSIEPTATGHIIEQLEIIKEILKKEFAYEVNGSVYFDVKKFNESFEYGKLSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ + + K++P DF LWK++ P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMIANTRELTAQSDKRSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ+ ++ N W+H L + G+KM+KS GN I
Sbjct: 238 LGETFDIHGGGMDLKFPHHECEIAQAEASNGHSP-VNYWLHANMLTMNGKKMAKSTGNNI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+ +++ V+R M+ HY +D + L +E + + +
Sbjct: 297 LPGEIFTGKNDILSKAFTPSVVRFFMMQAHYTSILDLSNDALLASEKGYQRLMEAVENLD 356
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPI 384
+D A+ +D NT I L + + + +
Sbjct: 357 GLDAGGKSDFDVIEWRQKCYDAMNDDFNTPILIANLFEAVKHINLIQEGNESISISDKEL 416
Query: 385 FN-----ASAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+E E + + +E L+Q R K F ++D IR QL +
Sbjct: 417 LQQTMKGFVFEVLGLEQKNESGQDSNKLQGVVELLIQLRNEARSNKDFVTSDKIRDQLLA 476
Query: 438 KGFILEDYKNPDN 450
G L+D K
Sbjct: 477 LGIQLKDGKEGTT 489
>gi|241764153|ref|ZP_04762188.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
gi|241366490|gb|EER60990.1| cysteinyl-tRNA synthetase [Acidovorax delafieldii 2AN]
Length = 459
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 243/478 (50%), Gaps = 44/478 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + +F ++P ++RMYVCG T+YD HIG+AR M+ FDV+ R L+
Sbjct: 1 MSLRIYNTLSRALEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + +D L P +
Sbjct: 60 -LRVTYVRNITDIDDKIIRRALERGIT------IRQLTDEMIAAMHQDIGALGIEPPAVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ LI + G AY N ++ + YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLSLIGQLEGKGLAYRATNGDVNYSVRKFAGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++P DF+LWK + P EP W+SP+G GRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 173 QDGKEDPLDFVLWKSAKPEEPPEAKWDSPFGTGRPGWHIECSAMSCATLGETFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLAKFWVHNGFVRVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGII 347
+ + A +R ++ HYR ++++ L +A L +
Sbjct: 286 -QQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVAPSEVASIDWADPY 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
+A+ D T AI L LA E K L + A A LG+
Sbjct: 345 AARFKAAMDEDFGTPEAIAVLFDLASEVNKTRSPQLAGLLKALAGCLGLLQGDPQAFLQA 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
AI+ + R K F+ AD IR L ++G +L+D T W+
Sbjct: 405 GAGFDEAAIQAQIAARAAAKAGKDFAEADRIRNALLAQGIVLKDS------AAGTTWE 456
>gi|311280587|ref|YP_003942818.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
gi|308749782|gb|ADO49534.1| cysteinyl-tRNA synthetase [Enterobacter cloacae SCF1]
Length = 461
Score = 362 bits (930), Expect = 5e-98, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 249/494 (50%), Gaps = 70/494 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT+ R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTMTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + + + + + KD L L P ++P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------EDFVGLVDRMIIEMHKDFDALNILRPDNEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I + + +I GHAY N +++F S P YG SR+ +D+ + G RV
Sbjct: 113 RATHHIPEIIEITERLIERGHAYVADNGDVMFSVPSDPTYGELSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKAGEPAWASPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNTWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDASAAAAGGEAFEARFRE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNH--------DLLPIFNASAHILGIEVCKEH----- 400
A+ +D NT A L +ARE + + + +LG+
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKGEDAQAASAMAAHLRKLSGVLGLLEQDPETFLQG 404
Query: 401 ---LNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ + IE L+Q+RL + +L G +LED
Sbjct: 405 GAQADDSEVAEIESLIQQRLDARKAKDWAAADAARD-----------RLNEMGIVLED-- 451
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 452 ----GPQGTTWRRK 461
>gi|295425605|ref|ZP_06818292.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
gi|295064621|gb|EFG55542.1| cysteine--tRNA ligase [Lactobacillus amylolyticus DSM 11664]
Length = 486
Score = 362 bits (930), Expect = 6e-98, Method: Composition-based stats.
Identities = 165/498 (33%), Positives = 253/498 (50%), Gaps = 62/498 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +K++NTL RK EF+ + P I MYVCGPTVY++ HIGNAR +I FD + R Y
Sbjct: 10 EQAVKVFNTLSRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSVIAFDTIRRYFEYRG 69
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV N TD+DDK+I AR E+ ++P + + +++DT L T
Sbjct: 70 Y--KVKYVSNFTDVDDKMINEARAENTTVPK------LAERYINAYLEDTEALNVEPATL 121
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+ I ++I ++ +I G+AYE + ++ + +YG S + I + + G
Sbjct: 122 HPRATHEIKEIIAFVKELIAKGYAYEVDGDVYYRAKKFADYGKLSDQNIAQLEEGASEHI 181
Query: 182 KYHKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++ DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGG
Sbjct: 182 NDTEQQRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGG 241
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
G DL FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T+++++
Sbjct: 242 GQDLEFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDII-- 298
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------- 345
+ V+R M YR I+++ L +A+++L ++ T T+
Sbjct: 299 -----KEVDPQVLRFFMASVQYRRQINYSEDNLKQAQVILERFKNTLTNINYRLEDDTAS 353
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLA-------RESTKNHDLLPIFNA 387
A+ +D N +A+ A+++L + + L F
Sbjct: 354 QEDAALKQAVAQTKLKFEQAMDDDFNVQNALTAIYELLPVVNANTNLANVDKTELKQFKK 413
Query: 388 S----AHILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+I GI+ K K I+ LV++R K K ++++D IR+QL+ G
Sbjct: 414 LLCQWLNIFGIDCDKLVATKASAEDEQIDALVKKRDEARKNKDWATSDQIREQLKKMGIT 473
Query: 442 LEDYKNPDNGQRMTRWKQ 459
++D + TRW +
Sbjct: 474 IQDT------PQGTRWTR 485
>gi|260910729|ref|ZP_05917387.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
gi|260635145|gb|EEX53177.1| cysteine-tRNA ligase [Prevotella sp. oral taxon 472 str. F0295]
Length = 536
Score = 362 bits (930), Expect = 6e-98, Method: Composition-based stats.
Identities = 156/501 (31%), Positives = 235/501 (46%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IYNTL R+ F+ + N+ MYVCGPTVY H+G+ARP I FDV++R L++
Sbjct: 42 SSPLLIYNTLTRQKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHLG 101
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T +
Sbjct: 102 Y--KVRYVRNITDVGHLEHDADDGDDKIAKKARLEQLE------PMEIAQHYTNTYHAAM 153
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P+A+ HI + L++ I +G AYE+N I FD + S R
Sbjct: 154 QLLNVLPPSIEPQASGHIIEQEELVKKIFANGFAYESNGSIYFDIAKYNQTHRYGILSGR 213
Query: 169 KIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ ++ K+N ADF LWK + P W SPWG G PGWH EC+AM Y
Sbjct: 214 NLEDVLDASRQLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGEGFPGWHCECTAMGRKY 273
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL+FPHHE EIAQ+ ++ E+ W+HN + + G+KM KS GNFI
Sbjct: 274 LGNQFDIHGGGMDLVFPHHECEIAQAVASEG-EQMVRYWMHNNMITINGQKMGKSLGNFI 332
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
T+ + +++ IR +L HYR +DF+ + L +E L +
Sbjct: 333 TLEQFFNGSHSALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQ 392
Query: 338 ---------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA- 387
T+T + A+ +D T + L + R D +A
Sbjct: 393 RIQPAKASDEATATIVNELPRKCYEAMNDDFQTPMVLSHLFEACRLINTLIDHKAQISAE 452
Query: 388 ------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
+ +LG+ + N A ++ ++ R K ++++D I
Sbjct: 453 HLEQLAATMRLFAFQLLGLNADNSNNNDAREEAFGQVVDMVLDLRAKAKADKDWATSDRI 512
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R +L + GF ++D K+ +
Sbjct: 513 RDELAAAGFEVKDTKDGATWK 533
>gi|21243088|ref|NP_642670.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
306]
gi|24418693|sp|Q8PK23|SYC_XANAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21108603|gb|AAM37206.1| cysteinyl-tRNA synthetase [Xanthomonas axonopodis pv. citri str.
306]
Length = 476
Score = 362 bits (929), Expect = 6e-98, Method: Composition-based stats.
Identities = 194/496 (39%), Positives = 262/496 (52%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F SS YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFSVSSFDGYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSADLPGWESPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T++EL+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHELIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAALQADSGNDVAPSRT 345
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----PIFNASAHILGI-------- 394
I V SAL +DLNT A+ + +A E+ + L + + +
Sbjct: 346 IPVEVESALEDDLNTPLALSVIASIASEARALRNELVHGGEPSTRMSDLHAVHAKLLGAG 405
Query: 395 -----------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 LALGLLQQDPAAWFSRGTDAGDDARITALVEERSTAKKAKDFARADAIRKQLAEEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|332283464|ref|YP_004415375.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330427417|gb|AEC18751.1| cysteinyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 483
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 173/496 (34%), Positives = 249/496 (50%), Gaps = 54/496 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R + ++P +RMYVCG TVYDF H+G+AR ++ FD++ R LR +
Sbjct: 1 MLHIYNTLSRAKEPLKTVEPGLVRMYVCGMTVYDFCHLGHARMLVSFDIVQRWLRASGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA Q +S +TS D L +P +P
Sbjct: 61 --VKYVRNITDIDDKIIRRAVQNG------QRMSEVTSFFIDAMHADERALGVASPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT H+ +M+ +I+ + +G AY+ + ++ + P YG S + +D+ + G RV
Sbjct: 113 RATEHVGEMLGIIKCLEQNGLAYQSDDGDVNYAVRDFPGYGKLSGKSLDDLRAGERVAVS 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP W S +G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SGKRDPLDFVLWKAAKSDEPDESKWPSNYGLGRPGWHIECSAMSRALLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL------- 292
L FPHHENEIAQS A A++W+H G L ++ KMSKS GNF TI +
Sbjct: 233 LKFPHHENEIAQSEGAFG-GTLASVWMHCGPLMVDSDKMSKSLGNFRTIRATISIDANLP 291
Query: 293 -ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------- 342
+ + A ++R ++ HYR ++ L +A+ L + QT
Sbjct: 292 ADQASYSANPREAEMLRFFIVRNHYRSQQNYAPDNLFDAQNALDRLYQTLHNVPAEPVQI 351
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNASAHILGIEVCKE 399
A +A+ +D NT A+ AL +L+ E+ +N + A ILG+
Sbjct: 352 DWNHPAAQAFRAAMDDDFNTSGAVAALFELSSEANRNGSGRSSGLMRALGGILGLLQSDP 411
Query: 400 HL----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
S IE L+++R + + + F+ AD IRK L+ G LE
Sbjct: 412 ATYLQSPTRYQPGSGSAQAVFASEQIEALIKDRALAKQERNFAQADQIRKTLQEGGIELE 471
Query: 444 DYKNPDNGQRMTRWKQ 459
D +T+W++
Sbjct: 472 DKAGG-----VTQWRR 482
>gi|295692211|ref|YP_003600821.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
gi|295030317|emb|CBL49796.1| Cysteinyl-tRNA synthetase [Lactobacillus crispatus ST1]
Length = 477
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 164/494 (33%), Positives = 248/494 (50%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL RK EF+ + P +I MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 5 RVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + K F+ DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEKTTVPK------LAEKFINAFLADTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I +I ++++I +G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDTE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
R V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLADDTASEESA 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFNA 387
+ A+ +D N +A+ A++ L + + +
Sbjct: 349 ELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLAS 408
Query: 388 SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G++ K + I+ LV++R K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|120437076|ref|YP_862762.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
gi|187629825|sp|A0M500|SYC_GRAFK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|117579226|emb|CAL67695.1| cysteinyl-tRNA synthetase [Gramella forsetii KT0803]
Length = 494
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 156/494 (31%), Positives = 236/494 (47%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +K+YN++ + F I+ N+ MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 EQSLKLYNSMSGEKETFTPINEGNVGMYVCGPTVYSNVHLGNCRTFMSFDLVFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D+I ++AR E + K T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDADSGEDRIAKKARLEQIE------PMEVVQKYTVDFHNIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
+ P+ +P AT HI + I +I+ I+ +G AYEAN + FD + +YG S R
Sbjct: 118 NKFNNYPPSIEPTATGHIVEQIEIIKTILDNGFAYEANGSVYFDVVKFNKEHSYGKLSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I++ + + K++P DF LWK++ P W SPW G PGWH+EC+ MS+ Y
Sbjct: 178 AIEDMIANTRELSAQSDKRSPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ A + N W+H L L G+KM+KS GNFI
Sbjct: 238 LGEEFDIHGGGMDLKFPHHECEIAQGEAATG-KSPVNYWLHANMLTLNGKKMAKSTGNFI 296
Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---- 341
++ +++ V+R +L HYR +DF+ L +E ++
Sbjct: 297 LPEQIFTGNNEVLTKAFSPNVVRFFVLQAHYRSILDFSSDALLGSEKGFNRLMDAYRSIE 356
Query: 342 ---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPI 384
+ + A+ +D N+ I L + D
Sbjct: 357 ELPASDKSDFNLSEWKQSCYDAMNDDFNSPILIAKLFDAVKTINGIKDGSIQITDTDKEE 416
Query: 385 FNA-----SAHILGI-EVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLE 436
F A ILG+ + E+ N+ +A IE L++ R K F+ +D IR +L+
Sbjct: 417 FKATMSAFMFDILGLIDAASENKNEGDKLAGTIELLIKLRADARNNKDFALSDQIRDRLQ 476
Query: 437 SKGFILEDYKNPDN 450
G L+D K +
Sbjct: 477 EIGIQLKDGKEGTS 490
>gi|221068474|ref|ZP_03544579.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
gi|220713497|gb|EED68865.1| cysteinyl-tRNA synthetase [Comamonas testosteroni KF-1]
Length = 461
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 176/478 (36%), Positives = 247/478 (51%), Gaps = 44/478 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F ++P ++RMYVCG TVYD H+G+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALESFSPLEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + +D L PT +
Sbjct: 61 --KVTYVRNITDIDDKIIRRAVENG------ETIRSLTDRMIDALHQDADALGIERPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+A N ++ + YG S + +DE G RV
Sbjct: 113 PRATEYVPQMLGMIAKLQDKGLAYQAGNGDVNYAVRKFAGYGKLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + EP W+SP+G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 ADGKLDPLDFVLWKSAKADEPADVKWQSPFGEGRPGWHIECSAMGCELLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFAQTWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A IR ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETIRFFVVRSHYRSPLNYSNVHLDDARGALKRLYTALDLVAPAEVQVDWSNPYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL----- 401
+A+ D T A+ L +LA E K+ ++ + LG+ +
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSPEVAGLLKTLGACLGLLQAEPQKFLQAG 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ AIE + R K ++ AD IRK+L +G +L+D T W+
Sbjct: 405 SEGVDAAAIEAQIAARAQAKAAKNWAEADRIRKELLEQGIVLKDS------AAGTTWE 456
>gi|315186109|gb|EFU19871.1| cysteinyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
Length = 470
Score = 362 bits (929), Expect = 7e-98, Method: Composition-based stats.
Identities = 156/484 (32%), Positives = 234/484 (48%), Gaps = 44/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++NT+ R F + + MY CGPTVY++AHIGN R I DVL R L +
Sbjct: 1 MELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTLLHAGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ +V N+TD+ +DK+I+ AR+ S+ I T+ F +DT
Sbjct: 61 --RLVHVMNVTDVGHLTSDGDEGEDKVIKAARERGMSV------WEIAEFFTKAFFEDTD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L P +AT HIP+MI L++ + GH Y A + +D S+ P YG +R +
Sbjct: 113 KLNIQRPEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELARLDEQD 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV HK++P DF+LW + E W+SPWG+G PGWH+ECSAMS YLG+
Sbjct: 173 LRAGARVGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGKGYPGWHLECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG+D I HH NEIAQS A W+H FL ++ KMSKS GNF+T++
Sbjct: 233 QFDIHCGGVDHIPVHHTNEIAQSEGATGRHPWVRYWLHAEFLVMDSGKMSKSKGNFLTLS 292
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L E + R L HYR + F+ + L A + +
Sbjct: 293 SLEE------EGFHPLDYRYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPREG 346
Query: 345 ----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-NASAHILG 393
A+ +DL+T A+ L + ++ + + ILG
Sbjct: 347 WEQTPLSERGEAYKREFEEAIGDDLSTPRALAVLWRAVKDEDLPPEERAVLTVTMDRILG 406
Query: 394 IEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + + + + + +LVQ R L K + F+ AD IR +L +G I+ED +
Sbjct: 407 LSLAEAIASDDALEPELLELVQRREALRKQRDFAEADRIRDELARRGIIVEDTPQGPRWK 466
Query: 453 RMTR 456
R T
Sbjct: 467 RKTT 470
>gi|295135612|ref|YP_003586288.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
gi|294983627|gb|ADF54092.1| cysteinyl-tRNA synthetase [Zunongwangia profunda SM-A87]
Length = 494
Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats.
Identities = 162/494 (32%), Positives = 244/494 (49%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++KIYN++ + F+ I+ S + MYVCGPTVY H+GN R I FD+++R L++
Sbjct: 6 EQQLKIYNSISGEKEVFKPINDSYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D+I ++AR E + K T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDAETGEDRIAKKARLEQIE------PMEVVQKYTVDFHNIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
+ L P+ +P AT HI + I +I+ II G AYEAN + FD + +YG S R
Sbjct: 118 EKFNNLPPSIEPTATGHIVEQIEIIKTIIDRGFAYEANGSVYFDVLKYNEEKHYGKLSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I++ + + K+NP DF LWK++ P W SPW G PGWH+EC+ MS+ Y
Sbjct: 178 AIEDMIANTRELAAQSDKRNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ A + + W+H L L G+KM+KS GN I
Sbjct: 238 LGEEFDIHGGGMDLKFPHHECEIAQGEAATGKDP-VHYWMHANMLTLNGKKMAKSTGNNI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---- 341
EL + G+++ V R ML HYR +DF+ + L+ +E ++ +
Sbjct: 297 LPEELFSGKNEVIGKAFSPNVARFFMLQAHYRSILDFSKEALSASEKGFNRLIEAYASID 356
Query: 342 ---------TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLP 383
+ + A+ +D N+ I L + D L
Sbjct: 357 DLPESSASTINLAEWKQSCYDAMNDDFNSPILIAKLFDAVKWINAIKEESLKISAEDKLE 416
Query: 384 IF----NASAHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ + ILG+ ++ L+ N +S A+E L++ R + F+++D IR QL+
Sbjct: 417 LKQVLHDFLFDILGLRDGEKSLDNNSDKLSGAVELLIKLRAEARNNRDFATSDKIRDQLQ 476
Query: 437 SKGFILEDYKNPDN 450
G L+D K+
Sbjct: 477 EMGIQLKDGKDGTT 490
>gi|265764886|ref|ZP_06093161.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|263254270|gb|EEZ25704.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_16]
Length = 491
Score = 362 bits (929), Expect = 8e-98, Method: Composition-based stats.
Identities = 171/497 (34%), Positives = 250/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+NE K +++ IR +L HYR P+DF+ + L AE +S+ + S
Sbjct: 292 ITLNEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGMSRLMEAVDSL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L A+
Sbjct: 352 EKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLK 411
Query: 380 DLLPIFNASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L +F+ ILG++ + ++ L+++R+ K ++++D IR +L
Sbjct: 412 NLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDTKDGFEWK 488
>gi|34541486|ref|NP_905965.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
gi|61216267|sp|Q7MTR6|SYC_PORGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|34397803|gb|AAQ66864.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis W83]
Length = 490
Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 164/497 (32%), Positives = 237/497 (47%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL RK F+ I ++ +YVCGPTVY AH+G+ARP I FD+LYR LR+
Sbjct: 1 MEHPLEIYNTLHRKKERFEPIHKPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V YVRNITD+ +DKI ++AR E + ++
Sbjct: 61 GYQ--VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLTRYRHA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD S
Sbjct: 113 MEALNVLPPSIEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I+E TR + +K DF LWK + P W SPWG G PGWH EC+AM
Sbjct: 173 RNIEEMINNTRRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQ+ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEEFDIHGGGMDLVFPHHECEIAQAVASQG-HPIVRYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
IT+ E +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 ITLEEFFSGAHPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALL 351
Query: 338 ------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------------KNH 379
TS G + A+ +DLN+ I AL AR
Sbjct: 352 DGLKTADTTSVEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITSSNLE 411
Query: 380 DLLPIFN-ASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F +LG+ + A++ L+ R K ++++D IR +L
Sbjct: 412 ELRTTFRLFLFDLLGMRDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFTIKDTKDGAEWK 488
>gi|295676873|ref|YP_003605397.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295436716|gb|ADG15886.1| cysteinyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 465
Score = 362 bits (928), Expect = 8e-98, Method: Composition-based stats.
Identities = 174/486 (35%), Positives = 254/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRAL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII+RA + + I +T + +D L P
Sbjct: 60 GY--NVTYVRNITDIDDKIIKRAVENG------ETIKSLTDRFIAALHEDADALGIERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + YG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIEALEKNGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK++ P EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R + HYR P++++ + +A L++
Sbjct: 288 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDSAALDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + D L A +LG+ +
Sbjct: 344 YAQRFQAAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQ 403
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
AIE + R+ + K +++AD IR +L G LED
Sbjct: 404 QAAGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLEAGVALEDKPGGL---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|60679757|ref|YP_209901.1| cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
gi|81317170|sp|Q5LIT7|SYC_BACFN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|60491191|emb|CAH05939.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
Length = 491
Score = 362 bits (928), Expect = 9e-98, Method: Composition-based stats.
Identities = 172/497 (34%), Positives = 250/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR P+DF+ + L AE LS+ + S
Sbjct: 292 ITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L A+
Sbjct: 352 EKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLK 411
Query: 380 DLLPIFNASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
DL +F+ ILG++ + ++ L+++R+ K ++++D IR +L
Sbjct: 412 DLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDTKDGFEWK 488
>gi|170699316|ref|ZP_02890365.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170135808|gb|EDT04087.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 465
Score = 362 bits (928), Expect = 9e-98, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRALENG------ETIKSLTDRFIGAMHEDEAALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ A+ ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D+NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDINTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|331701830|ref|YP_004398789.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
gi|329129173|gb|AEB73726.1| cysteinyl-tRNA synthetase [Lactobacillus buchneri NRRL B-30929]
Length = 468
Score = 362 bits (928), Expect = 9e-98, Method: Composition-based stats.
Identities = 172/493 (34%), Positives = 258/493 (52%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL RK +F+ I P ++MYVCGPTVY++ HIGNAR I FD + R L Y +
Sbjct: 1 MLQIFNTLTRKKEKFEPITPGVVKMYVCGPTVYNYIHIGNARSAIAFDTVRRYLEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I ARQ H ++ I K F++DT L + P
Sbjct: 61 --VKYVSNFTDVDDKMINAARQNHTTVG------AIADKYINAFMQDTAALNISSNVIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +IP++I ++ ++ G+AY+ + ++ F +YG+ +D+ ++G
Sbjct: 113 RATENIPEIIDFVKTLVDKGYAYDVDGDVYFRARKFKSYGALPHINVDQLEIGASQHVNP 172
Query: 184 HK----KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ ++P DF LWK+S E W+SPWG+GRPGWHIECS MS+ YLGK DIHGGG D
Sbjct: 173 EEMAKKEDPIDFALWKKSKGDEISWDSPWGKGRPGWHIECSVMSTKYLGKTIDIHGGGED 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
LIFPHHENE AQS + W+HNGF+ + + KMSKS GNFIT+++LL
Sbjct: 233 LIFPHHENERAQSEANTG-QTFVKYWMHNGFVTIGDDNEKMSKSLGNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
++ VIRL M THYR PI ++ + EA L K +
Sbjct: 287 --KNLDGQVIRLLMSTTHYRRPIQYSDASVKEASSNLKKLQTAFNNLEYRLHNADEGDDP 344
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
I A+ +D N + I A+++LA+ + + ++
Sbjct: 345 KTDQEVRQIVADFTDAMDDDFNVQNGIAAVYELAKFANTYSERETVFKLSLQFIINTLRQ 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ + GI++ + L I L+ ER K F +D IR++L+++G +LED
Sbjct: 405 LSGVFGIKLEQSELK---DDEIWSLIHEREQARHDKDFIRSDEIREELKARGIVLEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TR++++
Sbjct: 460 ----PQGTRFRKE 468
>gi|53711487|ref|YP_097479.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|61216162|sp|Q64ZY1|SYC_BACFR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|52214352|dbj|BAD46945.1| cysteinyl-tRNA synthetase [Bacteroides fragilis YCH46]
Length = 491
Score = 362 bits (928), Expect = 9e-98, Method: Composition-based stats.
Identities = 172/497 (34%), Positives = 250/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR P+DF+ + L AE LS+ + S
Sbjct: 292 ITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L A+
Sbjct: 352 EKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLK 411
Query: 380 DLLPIFNASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
DL +F+ ILG++ + ++ L+++R+ K ++++D IR +L
Sbjct: 412 DLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDTKDGFEWK 488
>gi|260102407|ref|ZP_05752644.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
gi|260083775|gb|EEW67895.1| cysteine-tRNA ligase [Lactobacillus helveticus DSM 20075]
Length = 476
Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats.
Identities = 169/493 (34%), Positives = 250/493 (50%), Gaps = 61/493 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 5 KVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGY--K 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I A E ++P + K F++DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I ++I +Q +I G+AYE++ ++ + +YG S + I+ + G +
Sbjct: 117 THEIKEIIAFVQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDEE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R M YR I+++ + L +A +L ++ T +
Sbjct: 290 -KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDSD 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
+ A+ +D N +A+ A++ L N + +A
Sbjct: 349 ELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLSA 408
Query: 388 SAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ GI+ K + + + I++LV++R K K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGIDTEKLCSQSADSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT- 467
Query: 447 NPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 468 -----PQGTRWTR 475
>gi|149376716|ref|ZP_01894474.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
gi|149358955|gb|EDM47421.1| cysteinyl-tRNA synthetase [Marinobacter algicola DG893]
Length = 436
Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats.
Identities = 168/457 (36%), Positives = 245/457 (53%), Gaps = 47/457 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD+ H+G+AR ++ FDV+ R LR+ + V YVRNITDIDDKI+ RA +
Sbjct: 1 MYVCGMTVYDYCHLGHARVLVAFDVITRYLRHSGYD--VHYVRNITDIDDKILRRADENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ S +T + + +D +L L+PT +P AT++I ++ +I ++ GHAY
Sbjct: 59 ------EVYSDLTQRMIKAMHEDEAKLGVLSPTEEPCATDYINDIVAMIHKLVSGGHAYA 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N ++ F S +YG S++K+++ G RV + K++PADF+LWK + E W S
Sbjct: 113 ADNGDVYFSVESYSDYGKLSKKKLEDLVAGARVDVQEAKRSPADFVLWKAAKEGEVSWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAMS+ LG+ FDIHGGG DL+FPHHENEIAQS CA+ N W+
Sbjct: 173 PWGDGRPGWHIECSAMSNRCLGETFDIHGGGPDLLFPHHENEIAQSECANG-HTFVNTWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G + + KMSKS GNF TI E+ E + V+R ++ +HYR +D++
Sbjct: 232 HAGAIRVNKEKMSKSLGNFFTIREIFE-------KYAPEVVRYFLVSSHYRSQVDYSEDN 284
Query: 327 LTEAEILLSKWPQT--------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-- 376
L EA L++ + ++ D A+ +D NT A LH +A E
Sbjct: 285 LAEAGRTLTRLYHALRGLVPAKNVAETEHDQRFAEAMDDDFNTAGATAVLHAVANEINLH 344
Query: 377 -------KNHDLLPIFNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
K ++ + +LG+ + + I ++Q R K
Sbjct: 345 RREGRDEKANEQAAVLVRLGGVLGLLQQDPEAFFQADTGGELSADDIAAMIQARADARKQ 404
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K F+ AD IR +L KG IL+D + T W++
Sbjct: 405 KDFAEADRIRDELADKGVILDDSR------EGTSWRR 435
>gi|325281506|ref|YP_004254048.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
gi|324313315|gb|ADY33868.1| cysteinyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
Length = 492
Score = 362 bits (928), Expect = 1e-97, Method: Composition-based stats.
Identities = 159/497 (31%), Positives = 248/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK ++ +YNTL RK +F+ I+P + +YVCGPTVY AH+G+ARP I FD+L+R L+Y
Sbjct: 1 MKNRLVLYNTLSRKKEQFEPINPPFVGLYVCGPTVYGDAHLGHARPAITFDLLFRYLKYL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++A+ + I T ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLTDDSDDGEDKIEKKAKLDRLE------PMEIVQFYTNRYHHN 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L L P+ +P A+ HI + L++ I+ +G AYE++ I FD + S+ +
Sbjct: 113 MEQLNTLPPSIEPHASGHIIEQEELVKKILDNGFAYESDGSIYFDVEAYNKKYSYGKLSG 172
Query: 171 DEQKM----GTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
+ ++ + K+NPADF LWK++TP W SPW G PGWH+ECS MS
Sbjct: 173 RRVEELFANTRQLDGQGEKRNPADFALWKKATPEHIMRWPSPWSNGFPGWHLECSCMSQK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGGLDL FPHHE EIAQS A E W+HN + ++G+KM KS GNF
Sbjct: 233 YLGDRFDIHGGGLDLQFPHHECEIAQSTAAYGHE-AVKYWMHNNMVTIKGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+++L +++ +R +L HYR P+DF+ + L A+ + +
Sbjct: 292 ITLDQLFSGENDVLEQAYSPMTVRFFILQAHYRSPLDFSNEALKAAQKGYERLMTAVRAL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLP 383
+ A+ +DLNT I L R + L
Sbjct: 352 DKVKASAGNTVDVDALITQCEEAIDDDLNTPVLISHLFDGVRMINSLVAGNEKIDAGNLA 411
Query: 384 IFNAS-----AHILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ E ++++ + ++ ++ R + K ++++D IR +L
Sbjct: 412 KLKKLYQDYVFDILGLKAESESVSQDHEVLGKILDMVMSIRTEAKQKKDWATSDKIRDEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
++ G ++D K +
Sbjct: 472 KAAGVAIKDTKEGYEWE 488
>gi|163746511|ref|ZP_02153869.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
gi|161380396|gb|EDQ04807.1| cysteinyl-tRNA synthetase [Oceanibulbus indolifex HEL-45]
Length = 456
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 198/454 (43%), Positives = 267/454 (58%), Gaps = 22/454 (4%)
Query: 1 MKKKI--KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
M + + K++NT RK +F ID N++MYVCGPTVYD AH+GNARP+IVFDVLYRLLR
Sbjct: 1 MTRDLTIKLHNTATRKKEDFTPIDADNVQMYVCGPTVYDRAHLGNARPVIVFDVLYRLLR 60
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+ YG VTYVRN TD+DDKI RA +I IT++ TQ ++ D + L
Sbjct: 61 HVYGTDHVTYVRNFTDVDDKINARAA------TSGRSIGEITAETTQWYLDDMAAVGALE 114
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
P H PRAT +IPQM+ +I+ +I G+AYEA ++F YG+ S R +D+ G R
Sbjct: 115 PDHMPRATQYIPQMVAMIRGLIDEGYAYEAEGHVLFRVRKYAEYGALSGRSVDDMIAGAR 174
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V +K++P DF+LWK S PGW SPWG+GRPGWHIECSAM+ LG FDIHGGG+
Sbjct: 175 VEVAPYKEDPMDFVLWKPSDEGTPGWPSPWGQGRPGWHIECSAMAHDLLGAQFDIHGGGI 234
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS CA AN W+HN L +EG+KMSKS GNF T+ +LL+
Sbjct: 235 DLQFPHHENEIAQSKCAGHG--FANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD----- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--LSALY 356
+ VIR ML THYR+P+D+T ++ EAE L KW + P+ ++ L
Sbjct: 288 -QGVQGEVIRFVMLSTHYRKPMDWTEKKREEAEKTLRKWYLQAAEAEAAPPSAELVALLA 346
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-IAIEK-LVQ 414
+DLNT A+ H+L+ + L ++G + + + + IE L
Sbjct: 347 DDLNTHGALTECHRLSN-ANDTAGLRGAM-TLLGLMGDLIPEWAAVQALDLSDIEAFLSD 404
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
R ++ K F+ D I+ L S G ++ K+
Sbjct: 405 ARATAMETKDFAEVDRIKTALTSVGIEVQMSKDG 438
>gi|146278108|ref|YP_001168267.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
gi|187630856|sp|A4WU98|SYC_RHOS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145556349|gb|ABP70962.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides ATCC 17025]
Length = 486
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 203/481 (42%), Positives = 270/481 (56%), Gaps = 41/481 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++ NT R+ F IDP+N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YG
Sbjct: 4 IRLTNTKTRRKEAFTPIDPANVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGPD 63
Query: 65 CVTYVRNITDIDDKIIERARQE---HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRN TD+DDKI A+ + + I T + + + +D L L PTH
Sbjct: 64 HVTYVRNFTDVDDKINAAAQARKAAGDPRSLEELIRARTDETIRWYHEDMDALGALRPTH 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT I MI +I++++ GHAYE ++F S +YG+ S R +D+ G RV
Sbjct: 124 EPRATEWIGAMIAMIEDLVARGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVEV 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LWK S PGWESPWGRGRPGWHIECSAMS LG FDIH GG+DL
Sbjct: 184 APFKEDPMDFVLWKPSDDELPGWESPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDLQ 243
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA AN+W+HN L + G+KMSKS GNF TI++L + R
Sbjct: 244 FPHHENEIAQSCCAHPEGGFANVWMHNEMLLVNGKKMSKSLGNFFTIHDLRKD-----RG 298
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---DPAVLSALYND 358
P VIR+ +L THY +P+D+T ++ +A+ L KW + + D AVL+AL +D
Sbjct: 299 IPGEVIRMVLLGTHYSKPMDWTAEKAAQAKATLWKWRKLTADVEPAASPDAAVLAALADD 358
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----------------EHL 401
LNT +AI LH +A + + ASA +LG+ E
Sbjct: 359 LNTPAAITRLHSIA-----AQEDGALLKASASLLGLLEDDLRGWTLPPVTGTGSGVMEVS 413
Query: 402 NKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE+L+ ER K F +D IR L G I++D
Sbjct: 414 GSATAIVGSVQYRETIERLLDERKQARMGKDFKRSDAIRDLLVGAGVIIKDTPAGAEWDL 473
Query: 454 M 454
Sbjct: 474 G 474
>gi|329954112|ref|ZP_08295207.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
gi|328528089|gb|EGF55069.1| cysteine--tRNA ligase [Bacteroides clarus YIT 12056]
Length = 491
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 168/497 (33%), Positives = 251/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEQQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AYE+ I FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYESEGSIYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLGK FDIHGGG+DL+FPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGKHFDIHGGGMDLVFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L AE L++
Sbjct: 292 ITLDEFFTGSNKTLAQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRLMDAVHGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLN+ I L AR
Sbjct: 352 EKITPGKASTVDVKTLRAKCYEAMNDDLNSPIVIAHLFDGARMINNIIAGNDTITAEDLQ 411
Query: 380 DLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG++ + + ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENNSNEEREAAFGKVVDMLLEERIKAKANKDWATSDKIRDKL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFAIKDTKDGCEWK 488
>gi|172061028|ref|YP_001808680.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|229558620|sp|B1YSM8|SYC_BURA4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|171993545|gb|ACB64464.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 465
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRALENG------ETIKSLTDRFIGAMHEDEAALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ A+ ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPQGASWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVQPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASA-----------HILG 393
+A+ +D+NT A+ L +LA E + + L A L
Sbjct: 344 HAQRFAAAMNDDINTPVAVATLFELAGEVNRTCDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|300727688|ref|ZP_07061075.1| cysteine--tRNA ligase [Prevotella bryantii B14]
gi|299775052|gb|EFI71657.1| cysteine--tRNA ligase [Prevotella bryantii B14]
Length = 496
Score = 361 bits (927), Expect = 1e-97, Method: Composition-based stats.
Identities = 156/502 (31%), Positives = 234/502 (46%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++ + IYNTL R F+ + N+ MYVCGPTVY AH+G+ARP I FD+L+R L++
Sbjct: 1 MEQHLLIYNTLTRTKELFKPLHAPNVGMYVCGPTVYGDAHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQYYTNRYHQA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L+Q I+ +G+AYE+N + FD S
Sbjct: 113 MDALNVLPPSIEPHATGHIIEQEQLVQQILDNGYAYESNGSVYFDIEKYDKDHKYGILSH 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + +R +K DF LWK++TP W SPWG G PGWH EC+AM
Sbjct: 173 RNLTDMINNSRELNGVGEKKNQVDFALWKKATPEHIMRWPSPWGDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE EIAQ+ + ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+++ +++ IR +L HYR +DF+ + L A+ +
Sbjct: 292 ITLDQFFTGNHASLDQAYSPMTIRFFILSAHYRGTVDFSNEALLAAQKGYERLMNAIDDL 351
Query: 345 -----------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+ A+ +D T I L + D +A
Sbjct: 352 SRVQVVATSDEPTAKFVKELRQRCYDAMNDDFMTPLVISYLFEACHLINSILDHKANISA 411
Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ K N A ++ ++ R K ++++D
Sbjct: 412 DDLKELTDTMHLFTFDLLGLKNEKGANNDAREEAYGKVVDMVLDLRAKAKASKDWATSDQ 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 472 IRDMLADAGFEIKDTKDGVAWK 493
>gi|255004163|ref|ZP_05278964.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Virginia]
Length = 466
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 193/484 (39%), Positives = 272/484 (56%), Gaps = 47/484 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL F + + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+ Y
Sbjct: 1 MRLHDTLHAAKRVFSPKNSGCVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII A E N +I+ +T+ T+ F +D L CL+PT +PR
Sbjct: 59 EVIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+++I +I GHAY + F S +YG+ S RK+ + G+RV
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T ++ W SPWG GRPGWH+ECSAMS YLG FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENEI+QSCCA + A W+HNGFL + G KMSKS GN IT+ LL
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLS------ 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------ID 348
VIR L THYR+P+D+ + + +A+ L+K ++ +
Sbjct: 287 NGVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLN 402
AV+++L +D+NT +AI ALH+L +E K ++ L + N SA ++G+
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406
Query: 403 KN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
I +L+++R+ K F AD IR+ L + G + D K+ TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461
Query: 457 WKQK 460
W +K
Sbjct: 462 WHRK 465
>gi|281422306|ref|ZP_06253305.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
gi|281403627|gb|EFB34307.1| cysteine--tRNA ligase [Prevotella copri DSM 18205]
Length = 496
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 157/502 (31%), Positives = 230/502 (45%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ IYNTL R F + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQKLLIYNTLTRTKERFTPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQYYTNRYHDA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L L P+ +P AT HI + L+Q I+ +G+AYE+N I FD +
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEKLVQEILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172
Query: 171 DEQKMGTRVPEK----YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
+ + KKN ADF LWK+++P W SPW G PGWH EC+AM
Sbjct: 173 RNLENVINESRELAGIGEKKNQADFALWKKASPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------ 338
IT+ + +++ IR +L HYR +DF+ L ++ L +
Sbjct: 292 ITLEQFFTGNHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASQKGLERLMNGLNDL 351
Query: 339 -----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
Q + A+ +D T I L + D +A
Sbjct: 352 ERVPVAKQSDEQVKKFVSELRQRCYDAMNDDFQTQLVISYLFEACHVINTALDHKANISA 411
Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ K N A ++ ++ R K ++++D
Sbjct: 412 EDLKELSDTMHLFTFDLLGLKSEKGANNDAREEAYGKVVDMVLNLRAKAKADKDWATSDQ 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 472 IRDALAEAGFEVKDTKDGVTWK 493
>gi|71906558|ref|YP_284145.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
gi|109894895|sp|Q47HK6|SYC_DECAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71846179|gb|AAZ45675.1| cysteinyl-tRNA synthetase [Dechloromonas aromatica RCB]
Length = 456
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 180/477 (37%), Positives = 263/477 (55%), Gaps = 43/477 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L+R+ F I+P+ +RMYVCG TVYD+ H+G+AR M+VFD++YR L+ +
Sbjct: 1 MLKIYNSLKREKQVFTPIEPNKVRMYVCGMTVYDYCHLGHARVMVVFDMVYRWLKASGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII+RA + + I +T++ +D L P ++P
Sbjct: 61 --VTYVRNITDIDDKIIKRAIENG------ETIQQLTNRFIAFMHEDADALGVQRPDYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++P+M+ LI + +G AY+ ++ ++ + P YG S + +D+ + G RV
Sbjct: 113 RATEYVPEMLDLIGKLEANGLAYQASDGDVNYAVRKFPGYGKLSGKSLDDLRAGERVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMSS LG+ FDIHGGG DL F
Sbjct: 173 SAKQDPLDFVLWKHAKPGEPAWQSPWGDGRPGWHIECSAMSSKLLGQHFDIHGGGQDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ N W+HNGF+ ++ KMSKS GNF TI +LE +
Sbjct: 233 PHHENEIAQSEGAN-CCNFVNYWMHNGFVRVDNEKMSKSLGNFFTIRTVLE-------QF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPAVL 352
A V+R +L HYR P++++ L +A L
Sbjct: 285 DAEVVRFFILRAHYRSPLNYSDAHLDDARRSLDSLYFALRDVPPAAADIDWSNEFAGRFA 344
Query: 353 SALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEHL--------N 402
+AL D ++ AI L +LA E K+ L + ++G+ +
Sbjct: 345 AALNEDFDSHGAIAVLFELAAEVNRQKSAGLSCLLKGLGGVIGLLEREPSAYLQGGAGVG 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
A+ +++ +R K K F+ AD IR +L++ G IL+D + T W++
Sbjct: 405 GLDEAAVGQMIVDRAAAKKAKNFAEADRIRDELKAAGIILDDS------PQGTTWRR 455
>gi|72160616|ref|YP_288273.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
gi|109894957|sp|Q47TG4|SYC_THEFY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71914348|gb|AAZ54250.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
Length = 466
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 161/488 (32%), Positives = 236/488 (48%), Gaps = 54/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T R++ +F + + +Y+CG TV HIG+ R + FD+L R L Y
Sbjct: 1 MSLRFYDTRTRQVRDFVPLREGCVSLYLCGATVQAPPHIGHIRSGVSFDILRRWLMYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + RN+TDIDDKI+ A E ++ +N + F + L CL PT +
Sbjct: 61 --RVIFCRNVTDIDDKILNVAASEGV------QWWEVSERNYRAFAEAYDTLGCLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+MI L++ +I GHAY + + ++ FD +S YGS S ++++E +
Sbjct: 113 PRATGHIPEMIELMRRLIDRGHAYVAEDGSGDVYFDVTSYAEYGSLSNQRLEEMRAAED- 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FDIHGGG+D
Sbjct: 172 GDARAKRDPRDFALWKGARPGEPSWPTPWGPGRPGWHLECSAMATKYLGPTFDIHGGGVD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQS A A W+HNG L G KMSKS GN + I E+
Sbjct: 232 LVFPHHENESAQSRAAGDG--FARYWLHNGLLTTGGEKMSKSLGNSLLIPEIT------- 282
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------DP 349
R +R + HYR +D++ + L EA + I
Sbjct: 283 RRVRPVELRYYLGQAHYRSNLDYSEESLREAASAYQRLENFLVRVNEIAGPIPDDVPVPE 342
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEH 400
+AL +DL A+ H RE + + A +LG++
Sbjct: 343 EFAAALDDDLGVPQALAVAHNHVREGNSALAEGAKERAAQIGARLRAMLAVLGLDPLSPQ 402
Query: 401 LNKNISIAI--------EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K K +++AD IR QL G +ED
Sbjct: 403 WAGSDDSGLHDVVDSLVSVVLEQRQEARKRKDYATADRIRDQLAEMGIAVEDTPQGP--- 459
Query: 453 RMTRWKQK 460
RW+ K
Sbjct: 460 ---RWELK 464
>gi|21222630|ref|NP_628409.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|30316185|sp|Q9L0Q6|SYC_STRCO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|7242756|emb|CAB77329.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
Length = 613
Score = 361 bits (926), Expect = 1e-97, Method: Composition-based stats.
Identities = 163/482 (33%), Positives = 246/482 (51%), Gaps = 48/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y +
Sbjct: 150 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 208
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKII +A ++ N I +N + F L CL PT++PR
Sbjct: 209 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 261
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +M+ +++ +I GHAYEA+ + FD S+P Y S S + +DE + +
Sbjct: 262 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 320
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGG+DLIFPH
Sbjct: 321 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 380
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A W+HN ++ + G KMSKS GN + ++E++ + WP
Sbjct: 381 HENEIAQAKGFGDA--FARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 431
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
V+R + HYR I+++ + L EAE + + PA
Sbjct: 432 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 491
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
A+ +DL A+ +H R+ L A +LG++
Sbjct: 492 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGA 551
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 552 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDQLGQSGLVIEDSPQGPRWSLG 611
Query: 455 TR 456
+R
Sbjct: 612 SR 613
>gi|161506926|ref|YP_001576880.1| cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
gi|172048174|sp|A8YTD3|SYC_LACH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160347915|gb|ABX26589.1| Cysteinyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
Length = 476
Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 249/493 (50%), Gaps = 61/493 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNTL RK EF+ + P I MYVCGPTVY++ HIGNAR I FD + R L Y
Sbjct: 5 KVYNTLTRKKEEFKPLVPGQISMYVCGPTVYNYIHIGNARSSIAFDTIRRYLEYKGY--K 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I A E ++P + K F++DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEAHAEETTVPK------LAEKFINAFLEDTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I ++I IQ +I G+AYE++ ++ + +YG S + I+ + G +
Sbjct: 117 THEIKEIIAFIQTLIDKGYAYESHGDVYYRAKKFKHYGELSDQNIERLEEGASEHINDEE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+N DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QNRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R M YR I+++ + L +A +L ++ T +
Sbjct: 290 -KEVDPQVLRFFMASVQYRRQINYSAENLQQAATILDRFKNTLVNINYRLEDDTPSKDSD 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
+ A+ +D N +A+ A++ L N + +A
Sbjct: 349 ELAKAIAKTNEKFEVAMDDDFNVQNALTAIYDLLPIVNANANAEKADKKSLKLFKDKLSA 408
Query: 388 SAHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ GI+ K + + I++LV++R K K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGIDTEKLCSQSAGSNDEIDQLVKKRDEARKKKDWATSDQIRDQLKEMGITIQDT- 467
Query: 447 NPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 468 -----PQGTRWTR 475
>gi|300088786|ref|YP_003759308.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
gi|299528519|gb|ADJ26987.1| cysteinyl-tRNA synthetase [Dehalogenimonas lykanthroporepellens
BL-DC-9]
Length = 482
Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats.
Identities = 165/497 (33%), Positives = 236/497 (47%), Gaps = 62/497 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI NTL F+ + MYVCG T AHIG+A I FDV+ R L Y
Sbjct: 1 MKISNTLTGTREVFKPAADP-VSMYVCGITPQSSAHIGHAMSYINFDVIRRYLLYRGY-- 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TD+DDKII +A P + +N F D + L L PR
Sbjct: 58 RVKYVQNFTDVDDKIIAKAA------PAGLTPLELADRNIADFQADMSALNILPADAYPR 111
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T IP +I L++ ++ G AYE + F + +YG S R +++ + G R+
Sbjct: 112 VTEEIPAIIELVEGLVARGFAYEVRGSVYFRVRRLADYGKLSHRTLEQMQAGARIEVDET 171
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK + P EP W SPWG+GRPGWHIECSAMS YLG+ DIHGGG DLIFPH
Sbjct: 172 KEDPMDFVLWKATKPGEPAWASPWGQGRPGWHIECSAMSHKYLGETIDIHGGGADLIFPH 231
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + W+HNG L L G KMSKS GN ITI E L + + A
Sbjct: 232 HENEIAQSESFTGQKPFVRYWLHNGLLQLGGEKMSKSLGNLITIKEAL-------QKYSA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------------AV 351
+R+ +L +HYR P+ ++ + + AE + Q + K +
Sbjct: 285 DALRVFVLSSHYRSPLTYSDEIVEAAEKGARRLTQAAGDKTVTSEADDPLFDREVCRSRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH-------DLLPIFNASAHILGIEVCK------ 398
+ A+ +D NT A+ AL LAR+ + + + A +LG+ +
Sbjct: 345 VEAMDDDFNTPRALAALFDLARDINRLEAEGRPTGKVRALLRELAGVLGLRLESADKTAG 404
Query: 399 --------------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ + A+ ++ R L + K ++ AD +R +L+
Sbjct: 405 DHSGLLVAAAEIWRADGRELPDWDGDAERAMADILSLRAELRREKNYAEADKLRNRLDET 464
Query: 439 GFILEDYKNPDNGQRMT 455
G +++D T
Sbjct: 465 GIVIKDTPTGPVWSYKT 481
>gi|87301066|ref|ZP_01083907.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
gi|87284034|gb|EAQ75987.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 5701]
Length = 493
Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats.
Identities = 177/513 (34%), Positives = 243/513 (47%), Gaps = 75/513 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL ++ FQ P + +Y CG TVYD H+G+AR IV+DVL R L +
Sbjct: 1 MTLRLTNTLTKRTEPFQPRVPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+NITDIDDKI+ RA +E S+ + ++ +N F D L L P
Sbjct: 61 --RVTFVQNITDIDDKILRRAAEEGSSMEV------VSERNITAFRDDMDSLNILPPDRV 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
PRAT + + +I + G AY A+ ++ F P+YG S R + +Q+
Sbjct: 113 PRATRCLDGIRAMIAELEASGAAYSADGDVYFAVMGQPDYGKLSGRSLSDQQDGASGRLN 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 SDEESRKRHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGS 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A+ E A W+HNG +N++G KMSKS GNF TI LL +
Sbjct: 233 DLIFPHHENEIAQSEAANG-EPLARYWLHNGMVNVDGEKMSKSLGNFTTIRALLAS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
A +RL +L HYR+P+DF+ + L A
Sbjct: 288 --GVSAMTLRLFVLQAHYRKPLDFSREALDAAATGWHGLNEALGLGLNTTFSAALGWADV 345
Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------- 383
P + AL +DLNT +A+ L +LAR L
Sbjct: 346 AAATQPAPGHDAGLETSRQGFIDALDDDLNTSAALAVLFELARPLRALARRLERGAEASG 405
Query: 384 ----------IFNASAHILGIEVC------KEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ + +LG+E E I L+ ERL + K++
Sbjct: 406 EDRALHARWLLLQELSGVLGLEPEISSRSEAEAGAGPAPAQILALISERLAARQQKRYPE 465
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD IR +L S+G L D + T W ++
Sbjct: 466 ADAIRDRLRSEGIELIDRPDGT-----TEWIRR 493
>gi|186684074|ref|YP_001867270.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|186466526|gb|ACC82327.1| cysteinyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 524
Score = 361 bits (926), Expect = 2e-97, Method: Composition-based stats.
Identities = 170/521 (32%), Positives = 241/521 (46%), Gaps = 85/521 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ ++ ++MY CG TVYD+ H+G+AR IV+DV+ R L++
Sbjct: 24 MTLTLYNTLTRRQEPFETVEAGKVKMYYCGVTVYDYCHLGHARACIVWDVVRRYLQFIGY 83
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y++N TDIDDKI+ RA EH S + + ++ + + +D RL
Sbjct: 84 E--VRYIQNFTDIDDKILNRACVEHSS------MEAVANRFIKAYFEDMARLGIREADEY 135
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+ + + LI + G AY A+ ++ + YG S RK+++ + G
Sbjct: 136 PRATHTMNGIQRLIHELEKKGFAYPADGDVYYAVRQFAEYGKLSGRKLEDMQAGKSERVN 195
Query: 183 ------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+P DF LWK + P E WESPWG GRPGWHIECSAM LG DIH G
Sbjct: 196 VEDPEYQKKKDPFDFALWKAAKPGETAWESPWGAGRPGWHIECSAMVRDRLGDTIDIHAG 255
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENEIAQS + A W+HNG + ++G KMSKS GNFITI ELL+
Sbjct: 256 GADLIFPHHENEIAQSEAVTG-KPLARYWLHNGMVKVDGEKMSKSLGNFITIRELLD--- 311
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------ 338
R +RL +L YR PIDFT + + A
Sbjct: 312 ---RGVNPMAVRLFVLTAQYRTPIDFTDEAIAAATNGWHTIKEGLLFGYQYGEKLGWDLG 368
Query: 339 -------------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ + ND N + L +LA+E +
Sbjct: 369 TGDLGLGTEEEFSQSPIPNPQYPVPNLYVERFQEIVNNDFNFPGGLTVLFELAKELRREG 428
Query: 380 DLL-----------------PIFNASAHILGIEVCKE----HLNKNISIAIEKLVQERLI 418
+L A +LG+E E +N IE +Q+R
Sbjct: 429 HILVHEGKTETSPDKLKHQWQTLVTLAGVLGLEAEIEAETDKINGLSDAEIEAKIQQRQE 488
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ K F+ +D IR +L+++G L D ++ TRW +
Sbjct: 489 ARQGKNFAESDRIRDELQAEGITLIDSRD------GTRWHR 523
>gi|222100839|ref|YP_002535407.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
gi|254781695|sp|B9KAQ8|SYC_THENN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|221573229|gb|ACM24041.1| Cysteinyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
Length = 460
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 163/472 (34%), Positives = 234/472 (49%), Gaps = 42/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I NTL K EF + P +RMYVCGPTVYD H+GNARP +VFDV R L Y
Sbjct: 1 MRITNTLTGKKEEFVPLQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+N TDIDDKII +A Q + + ++ +D L PR
Sbjct: 59 RVIMVQNFTDIDDKIINKANQLGVDPKM------VADTFIAEYWRDAHALGIRPANFHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + ++ +I+ ++ G+AY+ + FD YG S+++I++ G RV
Sbjct: 113 TTDFVDDIVEIIEKLVERGYAYQTKTGVYFDVRKFKKYGELSKKRIEDLIAGARVEVDET 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K P DF LWKR+ P EP W SPWG GRPGWHIEC+ MS LG+ FDIH GG DL+FPH
Sbjct: 173 KNFPLDFSLWKRAKPGEPCWNSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A W+HNG + G KMSKS GN T+ E + + +
Sbjct: 233 HENEKAQAEALTG-KIFAKYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KKYGR 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
+R +L HYR P+DF+ L++ + + P+ +T
Sbjct: 285 DGLRYMILSKHYRSPMDFSEDLLSDYSKAVRRVWEILRRYESNGVTGIPKRNTVYEEYVN 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGIEVCKE 399
+ AL +D NT A+ L +LA+ +K+ + NA +LG+ E
Sbjct: 345 RFVEALDDDFNTPVAVSILFELAKNLSKSMEEGDQENALLFYHLIRREFGPVLGLFDLNE 404
Query: 400 HLNKNI-SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + L++ R L K K++ +D+IR +L G IL D +
Sbjct: 405 ERREVAGESLLGILIEVRETLRKEKRYDLSDWIRDRLRENGIILRDTPSGTE 456
>gi|78066853|ref|YP_369622.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
gi|109894879|sp|Q39EY8|SYC2_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 2; AltName:
Full=Cysteine--tRNA ligase 2; Short=CysRS 2
gi|77967598|gb|ABB08978.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
Length = 465
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 176/486 (36%), Positives = 247/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + D + L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIGAMHDDESALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATEFIPQMLGMIETLETNGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPEDPEGTSWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEADTLALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAVATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLETGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|282880438|ref|ZP_06289145.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
gi|281305541|gb|EFA97594.1| cysteine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
Length = 496
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 156/502 (31%), Positives = 237/502 (47%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ +YNTL RK F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQKLFVYNTLTRKKELFEPLHAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE+N + FD S
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ +R + +K DF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVINNSRELDGVGEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE EIAQ+ + ++ W+HN + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DQMVRYWMHNNMITINGKKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
IT+ + + + IR +L HYR +DF+ + L ++ L +
Sbjct: 292 ITLEQFFTGEHDSLEQPYSPMTIRFFILSAHYRGTVDFSNEALQASQKGLERLMNGVHDL 351
Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
T + A+ +DL T I L + D
Sbjct: 352 ERLQAAATSNEATHKFVAELRQQCYDAMNDDLQTPVVISKLFEACHIINTLLDHTGSIDQ 411
Query: 381 -LLPIFNA-----SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
L + +LG++ + + N A ++ +++ R + K ++++D
Sbjct: 412 KDLDELKEVMHLFAFDLLGLKNEQGNDNDAREAAYGKVVDMVLELRAKAKQAKDWATSDQ 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L + GF ++D K+ +
Sbjct: 472 IRDALAANGFEVKDTKDGVTWK 493
>gi|253581402|ref|ZP_04858628.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
gi|251836766|gb|EES65300.1| cysteinyl-tRNA synthetase [Fusobacterium varium ATCC 27725]
Length = 473
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 180/488 (36%), Positives = 257/488 (52%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL KI EF+ + + MYVCGPTVY++ HIGNARP I FD + R Y
Sbjct: 1 MIKIYNTLSGKIDEFKPVKEGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
V YV+N TD+DDK+I RA +E S+ I K + + +DT+++ +
Sbjct: 60 -KVKYVQNFTDVDDKMIRRANEEGVSL------KDIAEKYIKAYFEDTSKVNLKEAGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT HI MI +IQN+I G+AYEA ++ F+ + YG+ S++ +++ K G R+
Sbjct: 113 PKATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVEDLKSGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK + EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGG DLI
Sbjct: 173 ADIKKSPVDFALWKAAKEGEPSWDSPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C+ E A W+HNG++N+ G KMSKS G F+ + ++LE
Sbjct: 233 FPHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLE-------Q 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
+ VIRL +L HYR+P+DF+ L +A+ L +
Sbjct: 284 FEGRVIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEGGADCAE 343
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--------------- 384
++A+ +D NT + A+ +L +E K + +
Sbjct: 344 LAEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEGDKLSAKGKETVKETVDYV 403
Query: 385 FNASAHILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
N +LG I + S +E +++ R K ++ +D IR +L G ++
Sbjct: 404 VNIMQEVLGVILKLDNEVGNLTSELVEFILEMRREARADKNWAMSDKIRDRLAEMGIKIK 463
Query: 444 DYKNPDNG 451
D K+
Sbjct: 464 DGKDTTTW 471
>gi|294677292|ref|YP_003577907.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
gi|294476112|gb|ADE85500.1| cysteinyl-tRNA synthetase [Rhodobacter capsulatus SB 1003]
Length = 460
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 194/462 (41%), Positives = 266/462 (57%), Gaps = 24/462 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+++N+ R+ F+ +DP ++RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 1 MIRLHNSKTRRKETFRPLDPRHVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGA 60
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A ++ + + I T + + D L L P
Sbjct: 61 DHVTYVRNFTDVDDKINATALARKEAGAPGTLEELIRARTEETIGWYHADMDALGALRPD 120
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+PRAT++I MI +I ++I+ GHAY + ++F S YG+ S R +D+ G RV
Sbjct: 121 HEPRATDYIGAMITMIADLIVRGHAYAKDGHVLFRVRSYTEYGALSGRSVDDMIAGARVE 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG FDIH GG+DL
Sbjct: 181 VAPFKEDPMDFVLWKPSDADLPGWDSPWGRGRPGWHIECSAMSYELLGASFDIHAGGIDL 240
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA AN+W+HN L +EG+KMSKS GNF T+ +LL+ +
Sbjct: 241 QFPHHENEIAQSCCAHPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYN 357
P VIR L THY +P+D+T ++ +AE L KW + + P VL AL +
Sbjct: 295 GIPGEVIRFVFLQTHYGKPMDWTAEKAAQAEATLRKWRALTAGVAPSHEVAPGVLEALAD 354
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT A+ LH L E + SA +LG+ + + + ++S KL
Sbjct: 355 DLNTAGALAVLHGLTGEP-------ALLKGSAQMLGLLLDEMGDWAKAPEVDLSGFAAKL 407
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R ++ K F+ D ++ L + G + K
Sbjct: 408 SDLRAKAMETKDFAPVDALKSALMAAGVEVRMSKAGVELLPG 449
>gi|86606543|ref|YP_475306.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|109894952|sp|Q2JTF4|SYC_SYNJA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|86555085|gb|ABD00043.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 506
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 172/527 (32%), Positives = 242/527 (45%), Gaps = 90/527 (17%)
Query: 3 KKIKIYNTLERKITEFQAI--------------DPSNIRMYVCGPTVYDFAHIGNARPMI 48
+ +YNTL R+ FQ + +RMYVCG TVYD H+G+AR +
Sbjct: 1 MTLVVYNTLTRRKEVFQPFGGSESISADEAAGGEKPLVRMYVCGVTVYDLCHLGHARTYV 60
Query: 49 VFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
V+D++ R L V YV+N TD+DDKI++RA + +++ + + ++
Sbjct: 61 VWDMVRRYLECRGY--RVKYVQNFTDVDDKILKRALERG------ESMQAVAERFIAEYF 112
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-----------EIIFDTS 157
+D RL PRAT + M LIQ++ L G AY + ++ +
Sbjct: 113 QDMDRLNIKRADLYPRATRSLRAMFELIQSLELKGFAYRVRDPLAPQGETPAYDVYYAVR 172
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYH---KKNPADFILWKRSTPMEPGWESPWGRGRPG 214
P+YG S RK++E + G K++P DF LWK + P EPG+ESPWG GRPG
Sbjct: 173 KFPDYGQLSGRKLEELEAGASGRVGEEGAGKRDPFDFALWKAAPPSEPGFESPWGWGRPG 232
Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
WHIECSAM LG DIH GG DLIFPHHENE+AQS + A W+HNGF+N+
Sbjct: 233 WHIECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSEPITG-KPLAKYWLHNGFVNVN 291
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G+KMSKS GNF T+ + L + +RL +L THYR PID T + A
Sbjct: 292 GQKMSKSLGNFTTLRQALAL-------YHPMALRLFLLQTHYRSPIDLTEAAMEAASHGW 344
Query: 335 SKWPQTSTS----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-- 382
+ A +A+ +D T A+ +LA+E + H+LL
Sbjct: 345 ETLQKGIHCAQQFGQGGSPDSEAMRAFQTAMDDDFGTPGALALAFELAKELIREHNLLTH 404
Query: 383 ---------------PIFNASAHILGIEVCKEHLNKN--------------ISIAIEKLV 413
LG + IE+LV
Sbjct: 405 QGHTHLQPHLLRQKGAALLEILATLGFCWPQPAQGSEKAAANGELAKLPPLEDARIEELV 464
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+R K K F+ AD IR+QL++ G L D K+ TRW ++
Sbjct: 465 AQRTAARKAKNFAEADRIREQLKALGITLIDQKDGT-----TRWLRQ 506
>gi|257057469|ref|YP_003135301.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256587341|gb|ACU98474.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 459
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 166/475 (34%), Positives = 239/475 (50%), Gaps = 44/475 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T R++ EF+ MY+CG TV HIG+ R + +DVL R L +
Sbjct: 1 MALQLFDTAARQVREFRPARSGTASMYICGATVQGVPHIGHVRGALNYDVLRRWLVHSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V VRN+TDIDDKI+ +A + + + + F L CL P+
Sbjct: 61 D--VLMVRNVTDIDDKILTKAAEAG------RPWWEWAATHERAFEDAYAALGCLPPSVT 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI LIQ +I GHAY A + F S+ +YG S +++DE + +
Sbjct: 113 PRATGHITQMIELIQRLIDSGHAYAAEGNVYFSVSTFDSYGQLSGQRLDEVQQ--GETQS 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP W +PWGRGRPGWH+ECSAM++ YLG FDIHGGG+DL+F
Sbjct: 171 EGKRDPRDFTLWKASKPGEPSWPTPWGRGRPGWHLECSAMATTYLGSEFDIHGGGVDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A A W+HN ++ L G KMSKS GN + I E+L R +
Sbjct: 231 PHHENERAQSMAAGDG--FARYWLHNAWVTLAGEKMSKSLGNVVAIPEML-------RRY 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR I+++ L+E+ + Q G + +
Sbjct: 282 RAVELRAYLIQPHYRSTIEYSDAALSESAQGYRRIEQFLRRVQSSTGEVQVGRVPAEFAA 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
AL +DL T A LH R+ D L A +LGI+ E
Sbjct: 342 ALDDDLGTPQAFAVLHNTVRDGNAALDSAKETEARQLAETVRAMVDVLGIDPLSEQWAEQ 401
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ ++ +++ER + F++AD IR +L G +ED N
Sbjct: 402 GGAEAEVLARLVDAMLEERQQARANRDFATADAIRDRLIEAGIAVEDTPNGPQWT 456
>gi|307719502|ref|YP_003875034.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
6192]
gi|306533227|gb|ADN02761.1| hypothetical protein STHERM_c18260 [Spirochaeta thermophila DSM
6192]
Length = 702
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 157/484 (32%), Positives = 234/484 (48%), Gaps = 44/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++NT+ R F + + MY CGPTVY++AHIGN R I DVL R L +
Sbjct: 233 MELRLFNTMGRIQEPFVPREAGKVGMYTCGPTVYNYAHIGNLRTYIFEDVLRRTLLHAGY 292
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ +V N+TD+ +DK+I+ AR+ S+ I T+ F +DT
Sbjct: 293 --RLVHVMNVTDVGHLTSDGDEGEDKVIKAARERGMSV------WEIAEFFTRAFFEDTD 344
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L P +AT HIP+MI L++ + GH Y A + +D S+ P YG +R +
Sbjct: 345 KLNIQRPEIVCKATEHIPEMIDLVKRLEERGHTYLAGGNVYYDISTFPRYGELARLDEQD 404
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV HK++P DF+LW + E W+SPWGRG PGWH+ECSAMS YLG+
Sbjct: 405 LRAGARVGVDAHKRSPRDFVLWFTRSKFEHQAMVWDSPWGRGYPGWHLECSAMSMKYLGE 464
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG+D I HH NEIAQS A W+H FL ++ KMSKS GNF+T++
Sbjct: 465 QFDIHCGGVDHIPVHHTNEIAQSEGATGKHPWVRYWLHAEFLVMDSGKMSKSKGNFLTLS 524
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
L E + R L HYR + F+ + L A + + D
Sbjct: 525 GLEE------EGFHPLDYRYFCLGAHYRSQLFFSWEALEAARNARRNLIEHLSGLHPRDG 578
Query: 350 A---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-ASAHILG 393
A+ +DL T A+ L + ++ + + ILG
Sbjct: 579 WEQTRLSERGEAYMREFEEAIGDDLATPRALAVLWRALKDEALPPEERAVLAVTMDRILG 638
Query: 394 IEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + + + + + +LV+ R L K + F+ AD IR +L +G I+ED +
Sbjct: 639 LSLAEAIASDDALEPELLELVRRREALRKQRNFAEADRIRDELARRGIIVEDTPQGPRWK 698
Query: 453 RMTR 456
R T
Sbjct: 699 RKTT 702
>gi|325287202|ref|YP_004262992.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
gi|324322656|gb|ADY30121.1| cysteinyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
Length = 494
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 163/494 (32%), Positives = 234/494 (47%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IK+YN+L K EF+ I+ +I MYVCGPTVY H+GN R + FD+++R ++
Sbjct: 6 NQTIKVYNSLSGKKEEFKPINDGHIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLG 65
Query: 62 GEKCVTYVRNITD----ID------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D DKI ++AR E + + T F
Sbjct: 66 Y--KVRYVRNITDAGHLVDDADEGEDKIAKKARLEQIE------PMEVVQRYTVDFHNTL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
+ L P+ +P AT HI + I +I+ II G AYE N + FD + +YG S R
Sbjct: 118 QKFNFLPPSIEPTATGHIIEQIEIIKEIIEKGFAYEVNGSVYFDVVEFNKTNDYGILSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ + + KKNP DF LWK++ P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMIANTRELAAQSDKKNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ+ ++ N W+H L L G+KMSKS N I
Sbjct: 238 LGETFDIHGGGMDLKFPHHECEIAQAQASNGSAP-VNYWLHANMLTLNGKKMSKSTDNNI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
NE+ +++ +R M+ HY +D + L +E K + TS
Sbjct: 297 YPNEIFSGDNNILSKAFSPSAVRFFMMQAHYTSILDLSNDALLASEKGYLKLMEAITSLK 356
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
I+ A+ +D N+ I L + + D
Sbjct: 357 AIETGSKTEFDVAAWQQKCYDAMNDDFNSPILIAHLFEAVKHINLIKDGKETITKEDKEL 416
Query: 388 --------SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ ILG+ E N + + + L+Q R K F+ +D IR QL
Sbjct: 417 LENTLNTFAFDILGLTGVNEDANGNSEKLEEVVNLLIQLRNDARSNKDFALSDQIRDQLL 476
Query: 437 SKGFILEDYKNPDN 450
+ G L+D K+
Sbjct: 477 AIGIQLKDGKDGTT 490
>gi|282878389|ref|ZP_06287179.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
gi|281299491|gb|EFA91870.1| cysteine--tRNA ligase [Prevotella buccalis ATCC 35310]
Length = 496
Score = 360 bits (925), Expect = 2e-97, Method: Composition-based stats.
Identities = 160/502 (31%), Positives = 236/502 (47%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ +YNTL RK F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQKLFVYNTLTRKKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQLYTNRYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE+N + FD S
Sbjct: 113 MDALNVLRPSIEPHATGHIIEQEELVKQILANGYAYESNGSVYFDIEKYNKDHHYGILSG 172
Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ +R + K+N DF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVINNSRELDGVDEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE EIAQ+ + ++ W+HN + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DQMVRYWMHNNMITINGKKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ IR +L HYR +DF+ + L +E L +
Sbjct: 292 ITLEQFFHGTHDRLTQAYSPMTIRFFILSAHYRSTVDFSNKALQASEKGLERLMNGINDL 351
Query: 345 GIID-----------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
I A+ +DL T + I L + D NA
Sbjct: 352 ERIQAASTSDEATHQLVVTLRQKCHEAMNDDLQTPTVISNLFEACHAINSLLDHKGSINA 411
Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ K N A ++ ++ R K ++++D
Sbjct: 412 EDLTELKAVMQLFAFDLLGLKSEKGSNNDAREAAYGKVVDMVLSLRAKAKAEKDWATSDQ 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 472 IRDALAENGFEVKDTKDGVTWK 493
>gi|54308291|ref|YP_129311.1| cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
gi|61216519|sp|Q6LT67|SYC1_PHOPR RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
Full=Cysteine--tRNA ligase 1; Short=CysRS 1
gi|46912719|emb|CAG19509.1| putative cysteinyl-tRNA synthetase [Photobacterium profundum SS9]
Length = 464
Score = 360 bits (924), Expect = 2e-97, Method: Composition-based stats.
Identities = 178/501 (35%), Positives = 248/501 (49%), Gaps = 81/501 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L ++ EF+ I P I MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTKQKEEFKPIQPGKIGMYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYSGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + ++ +T + + KD L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ESCESLTERLIGEMHKDFDALGMKRPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I ++I L + +I G AY +N +++F+ S YG SR+ +D+ + G RV
Sbjct: 113 RATEFIAEIIILCERLIERGFAYVASNGDVMFEVSKFEEYGRLSRQDLDQLQAGARVDID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 MAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSAILGDHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCATGSQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ L +A L + + +
Sbjct: 285 DAESVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDLTAQAEGGEEFVTRFTA 344
Query: 354 ALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHILGIEVCKEH 400
++ +D NT A L +ARE + L A ILG+
Sbjct: 345 SMNDDFNTPEAYSVLFDMAREINRLKADETIANNIVQASALGARLRELADILGLLSQDPE 404
Query: 401 ------LNKNISIAIEKLVQERL---------------ILLKMKKFSSADYIRKQLESKG 439
++ IE LVQ+RL +L +
Sbjct: 405 AFLQGGAGQDDVAEIETLVQQRLDARAAKDWAAADAARD---------------KLLAMK 449
Query: 440 FILEDYKNPDNGQRMTRWKQK 460
ILED G + T W++K
Sbjct: 450 IILED------GPQGTTWRRK 464
>gi|325918144|ref|ZP_08180296.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
gi|325535619|gb|EGD07463.1| cysteinyl-tRNA synthetase [Xanthomonas vesicatoria ATCC 35937]
Length = 476
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 194/496 (39%), Positives = 263/496 (53%), Gaps = 58/496 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSCPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITHRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F +S YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGWESPW RGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSTDDLPGWESPWSRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------ 348
P +RLA++ HYR+P+D++ + +A+ L + T +D
Sbjct: 286 KHPPEALRLALVSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDVAALDAGDAPDGSASPA 345
Query: 349 --PAVLSALYNDLNTVSAIQALHKLARESTKNHDL----LPIFNASAHILGIE------- 395
V +AL +DLNT A+ + +A E+ + I A + I+
Sbjct: 346 IPAEVEAALDDDLNTPQALSIIASIAAEARALRNQVTHGADISARRAELREIKTRLLGAG 405
Query: 396 ------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
N I LV+ER K K F+ AD IRKQL +G +LE
Sbjct: 406 LALGLLQQDPAAWFARGTNAGDDARITALVEERSTAKKAKDFARADAIRKQLADEGIVLE 465
Query: 444 DYKNPDNGQRMTRWKQ 459
D + RWK+
Sbjct: 466 DT------PQGVRWKR 475
>gi|61216286|sp|Q7V6K0|SYC_PROMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 499
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 171/516 (33%), Positives = 237/516 (45%), Gaps = 81/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + ++ +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TDIDDKI++RA ++ S + I+ +N + F +D L L P
Sbjct: 61 --TVTFVQNFTDIDDKILKRAAEKECS------MQEISEQNIEAFHQDMDSLGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
PRAT + + LI + G AY + ++ F YG S R ++EQ+
Sbjct: 113 PRATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++ DF LWK + EP + SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 DAEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A ++ A W+HNG +N+ G+KMSKS GNF TI LLE
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLE----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
+RL +L HYR+P+DFT + A
Sbjct: 287 -NGVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETLNWPECKP 345
Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
P I + AL +DLN+ AI L LAR + L
Sbjct: 346 LPQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKRGDT 405
Query: 384 ----------------IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLK 421
+ A++LG+E K E N+ I++ + R
Sbjct: 406 KAIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKEAKA 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ F+ AD IR +L ++G L D T W
Sbjct: 466 ARDFAKADLIRDELRAQGIELIDKPGGL-----TDW 496
>gi|319779351|ref|YP_004130264.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
gi|317109375|gb|ADU92121.1| Cysteinyl-tRNA synthetase [Taylorella equigenitalis MCE9]
Length = 486
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 183/499 (36%), Positives = 256/499 (51%), Gaps = 58/499 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY++L R+ E + I+ + IRMYVCG TVYDF H+G+AR ++ FDV+ R LRY +
Sbjct: 1 MQIYDSLTRQKQELKPIETNKIRMYVCGITVYDFCHLGHARMLVSFDVICRWLRYKGYQ- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRN+TDIDDKII++A + +N ++ IT T D L L P H+PR
Sbjct: 60 -VNYVRNVTDIDDKIIKKA------VALNKRLNEITQFYTDAMHADERALGVLPPDHEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+HI M+ +I + G AY++ + + F +YG S R ID+ + G RV
Sbjct: 113 ATDHISGMLEIINKLESKGLAYKSKDNDVNFSVRKFDSYGKLSGRSIDDLRSGERVAISE 172
Query: 184 HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK + EP W SP+G GRPGWHIECSAMS LG DIHGGG DL
Sbjct: 173 AKLDPLDFVLWKAAKDSEPEDSKWTSPYGLGRPGWHIECSAMSKELLGLPLDIHGGGPDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL-------E 293
FPHHENEIAQS A IE A IW+H G L ++ KMSKS GNF TI + + +
Sbjct: 233 KFPHHENEIAQSEGAYDIE-LARIWMHCGPLMVDNDKMSKSLGNFKTIRQTVAVGEVSDD 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------ 341
+ ++ A ++R ++ HYR +FT L +A+ + + QT
Sbjct: 292 SAEYEFNEREAEMLRFFIVRNHYRSAQNFTPDNLVDAQSAIDRLYQTFGTFDAKDFIESP 351
Query: 342 -TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--NHDLLPIFNASAHILGIEVCK 398
++A+ +D NT A+ L +L E K + +L + A +LG+
Sbjct: 352 IDWSNPYAVKFMNAMDDDFNTSLAVSVLFELNTEVNKTKSKELFKLLVALGKLLGLFRVN 411
Query: 399 EHLNKNIS------------------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
L I IE L++ER K F AD IR L++ G
Sbjct: 412 PRLYFKIPTRYSKTQIDGSGGIAISNNDIEGLIEERKAAKANKDFKKADEIRDYLKATGI 471
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
LED +T W++
Sbjct: 472 ELEDKPGG-----ITNWRR 485
>gi|302544419|ref|ZP_07296761.1| cysteine-tRNA ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302462037|gb|EFL25130.1| cysteine-tRNA ligase [Streptomyces himastatinicus ATCC 53653]
Length = 466
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 162/484 (33%), Positives = 249/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTGARQIRDFSPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN+TDIDDKII ++ ++ I N + F L CL PT++
Sbjct: 61 D--VTFVRNVTDIDDKIIAKSAEQG------RPWWSIGYANERAFTSAYDVLGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI +++ +I GHAY A + FD S P Y S + +D + + +
Sbjct: 113 PRATGHIPEMIEMMRGLIDRGHAYAAEGNVYFDVRSYPEYLRLSNQDLDGLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKGFG--DDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVTEKAGKAVPAAADVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ +H +
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDDHWS 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K +++AD IR QL+ G ++ED + +
Sbjct: 403 GGSDRGEDLHGVVDSLVRLVLEQRQAARGRKDYATADAIRDQLQQSGLVIEDTPSGPRWE 462
Query: 453 RMTR 456
TR
Sbjct: 463 LGTR 466
>gi|253564451|ref|ZP_04841908.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|251948227|gb|EES88509.1| cysteinyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|301161219|emb|CBW20757.1| putative cysteinyl-tRNA synthetase [Bacteroides fragilis 638R]
Length = 491
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 172/497 (34%), Positives = 250/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTRL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR P+DF+ + L AE LS+ + S
Sbjct: 292 ITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDSL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L A+
Sbjct: 352 EKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLK 411
Query: 380 DLLPIFNASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
DL +F+ ILG++ + ++ L+++R+ K ++++D IR +L
Sbjct: 412 DLKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDTKDGFEWK 488
>gi|256844496|ref|ZP_05549982.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|293381071|ref|ZP_06627092.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
gi|312977950|ref|ZP_07789696.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
gi|256613574|gb|EEU18777.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|290922371|gb|EFD99352.1| cysteinyl-tRNA synthetase [Lactobacillus crispatus 214-1]
gi|310895257|gb|EFQ44325.1| cysteine--tRNA ligase [Lactobacillus crispatus CTV-05]
Length = 477
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 163/494 (32%), Positives = 247/494 (50%), Gaps = 62/494 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL RK EF+ + P +I MYVCGPTVY++ HIGNAR I FD + R Y +
Sbjct: 5 RVYNTLTRKKEEFKPLVPGHISMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYKGYD-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV N TD+DDK+I AR E ++P + F+ DTT L T PRA
Sbjct: 63 VKYVSNFTDVDDKMINEARAEKTTVPK------LAENFINAFLADTTALNIEPATLHPRA 116
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T+ I +I ++++I +G+AYE + ++ + +YG S + I++ + G +
Sbjct: 117 THEINDIITFVKSLIDNGYAYEVDGDVYYRAKKFKHYGQLSDQNIEQLEEGASEHINDTE 176
Query: 186 KNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ DF LWK P E W+SPWG+GRPGWHIECS MS+ YLG DIHGGG DL
Sbjct: 177 QSRKEDPIDFALWKAQKEPDEIAWDSPWGKGRPGWHIECSVMSTKYLGDTIDIHGGGQDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENEIAQS +K N W+HNGF+ + + KMSKS NF+T++++L
Sbjct: 237 EFPHHENEIAQSEAKTG-KKFVNYWLHNGFVTVGKDQEKMSKSLHNFVTVHDIL------ 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
R V+R M YR I+++ + L +A +L ++ T T+
Sbjct: 290 -REVDPQVLRFFMASVQYRRQINYSAENLAQAATILDRFKNTLTNINYRLEDDTASEESA 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLA-----------RESTKNHDLLPIFNA 387
+ A+ +D N +A+ A++ L + + +
Sbjct: 349 ELAQAIMATNEKFEQAMDDDFNVQNALTAIYDLLPVVNANANAARADKQELQKFKEKLAS 408
Query: 388 SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G++ K + I+ LV++R K ++++D IR QL+ G ++D
Sbjct: 409 WLLVFGVDTNKLCVKNAGSNDDEIDALVKKRDEARANKDWATSDQIRDQLKEMGITIQDT 468
Query: 446 KNPDNGQRMTRWKQ 459
+ TRW +
Sbjct: 469 ------PQGTRWTR 476
>gi|15643482|ref|NP_228528.1| cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|6831684|sp|Q9WZH8|SYC_THEMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|4981244|gb|AAD35801.1|AE001743_3 cysteinyl-tRNA synthetase [Thermotoga maritima MSB8]
Length = 460
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 164/472 (34%), Positives = 239/472 (50%), Gaps = 42/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I NTL K EF I P +RMYVCGPTVYD H+GNARP +VFDV R L Y
Sbjct: 1 MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPALVFDVFRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+N TDIDDKII +A Q + ++ +D L PR
Sbjct: 59 RVIMVQNFTDIDDKIINKANQLGVD------YKTVADTFIAEYWRDAHALGIRPANFHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + ++ +I+ ++ G AY+ + FD YG S++KI++ G RV
Sbjct: 113 TTDFVEDIVEIIEKLVEKGFAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS LG+ FDIH GG DL+FPH
Sbjct: 173 KKSPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A W+HNG + G KMSKS GN T+ E + + +
Sbjct: 233 HENEKAQAEALTG-KVFARYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KRYGR 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
+R +L HYR P+DF+ + L + + + P+ +
Sbjct: 285 DGLRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYVN 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGI-EVCK 398
+ AL +D NT A+ + +LAR +K D +A + +LG+ ++ +
Sbjct: 345 RFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLNE 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E + ++ L++ R +L K K++ +D IR +L G IL+D +
Sbjct: 405 EKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDRLREIGIILKDTPSGTE 456
>gi|218258486|ref|ZP_03474853.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
DSM 18315]
gi|218225458|gb|EEC98108.1| hypothetical protein PRABACTJOHN_00508 [Parabacteroides johnsonii
DSM 18315]
Length = 492
Score = 360 bits (924), Expect = 3e-97, Method: Composition-based stats.
Identities = 159/498 (31%), Positives = 233/498 (46%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPLSIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ +
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHRA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD +
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K NP DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIDDMLNTTRALDGQDEKHNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + E + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-EDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 ITLDEFFTGDNKMLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYHHL 351
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF------ 385
+ A+ +DLN+ I L AR D
Sbjct: 352 MKLKAADVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARTINSVKDGKATISLEDLK 411
Query: 386 -------NASAHILGIEVCKEHLNKNISI----AIEKLVQERLILLKMKKFSSADYIRKQ 434
ILG++ N + A++ L+ R K ++++D IR +
Sbjct: 412 ELQDVFHTFIFDILGMKDEAASAGNNSNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNE 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 LTAIGFEIKDTKDGAEWK 489
>gi|298206748|ref|YP_003714927.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
gi|83849379|gb|EAP87247.1| cysteinyl-tRNA synthetase [Croceibacter atlanticus HTCC2559]
Length = 495
Score = 360 bits (923), Expect = 3e-97, Method: Composition-based stats.
Identities = 164/494 (33%), Positives = 240/494 (48%), Gaps = 56/494 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K ++IYN+L + F+ ID ++ MYVCGPTVY H+GN R I FD+++R L++
Sbjct: 7 KNLQIYNSLSGQKEIFKPIDEHHVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLGY 66
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD +D+I ++AR E + + T F
Sbjct: 67 --KVRYVRNITDAGHLENDAEVGEDRIAKKARLEQIE------PMEVVQRYTVDFHNTLG 118
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
+ L P+ +P AT HI + I +I++II G AYEAN + FD +S NYG S RK
Sbjct: 119 KFNNLPPSIEPTATGHIVEQIEIIKDIIDKGFAYEANGSVYFDVLKYNSSNNYGILSGRK 178
Query: 170 IDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
+++ + + KKNP DF LWK++ P W SPW G PGWH+EC+ MS+ YL
Sbjct: 179 LEDMIANTRELAAQSDKKNPQDFALWKKAEPQHIMRWPSPWSDGFPGWHLECTVMSTKYL 238
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G+ FDIHGGG+DL FPHHE EIAQ A + N W+H L L G+KM+KS GN+I
Sbjct: 239 GEQFDIHGGGMDLKFPHHECEIAQGKAASGKDP-VNYWMHANMLTLNGKKMAKSTGNYIL 297
Query: 288 INELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
NE+ +++ V+R +ML +YR +DF+ + L +E K
Sbjct: 298 PNEMFTGDNDILSKAYLPSVVRFSMLQANYRSILDFSDEALLASEKGYFKLMTAINMLDS 357
Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------L 381
+ +A+ +D N+ I L + +D L
Sbjct: 358 LPTSNTSSIDVETWKNSCYTAMNDDFNSPVLIAKLFDAVKLINTVNDNKDTITKENLSIL 417
Query: 382 LPIFNAS-AHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
NA +LG+E + + +S +E L+Q R K F+++D IR +L
Sbjct: 418 KETLNAFVFDVLGLENANSNTATDSSSDKLSGTLELLIQLRAEARANKDFATSDKIRDEL 477
Query: 436 ESKGFILEDYKNPD 449
L+D K+
Sbjct: 478 AKLDIELKDGKDGT 491
>gi|254464102|ref|ZP_05077513.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
gi|206685010|gb|EDZ45492.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium Y4I]
Length = 460
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 216/459 (47%), Positives = 273/459 (59%), Gaps = 26/459 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT RK F+ ID SN+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR YGE
Sbjct: 8 IKLHNTKTRKKEVFEPIDASNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREIYGED 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RN TD+DDKI RA + I IT++ TQ F+ D L L P+H PR
Sbjct: 68 QVTYARNFTDVDDKINARAAESG------RLIGEITAETTQWFLDDMGELGALEPSHMPR 121
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQM+ +I+++I GHAY A ++F S YG S R +D+ G RV
Sbjct: 122 ATEYIPQMVAMIEDLISKGHAYAAEGHVLFAVDSWKDRYGRLSGRSVDDMIAGARVEVAP 181
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKNP DF+LWK ST PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+FP
Sbjct: 182 YKKNPMDFVLWKPSTDDLPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFP 241
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA A W+HN L +EG+KMSKS GNF T+ +LL+ + +P
Sbjct: 242 HHENEIAQSCCAHPEGDFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGYP 295
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYNDLN 360
VIRL L THYR+P+D+T ++ EAE L KW + AVL AL +DLN
Sbjct: 296 GEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAGIEPASSAAAAVLEALADDLN 355
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKLVQE 415
+ AI LHKLA + ASA +LG+ + + ++S EKL +
Sbjct: 356 SAGAIAELHKLAADGDAAG-----LLASAQMLGLLTEEMGAWASAPSIDLSAFAEKLFKT 410
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R ++ K FS D ++ G + K
Sbjct: 411 RQKAMESKDFSEVDKLKAAYVEAGLEVRMSKTGVELVPG 449
>gi|78184269|ref|YP_376704.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|109894955|sp|Q3AZ17|SYC_SYNS9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78168563|gb|ABB25660.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9902]
Length = 499
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 167/519 (32%), Positives = 234/519 (45%), Gaps = 81/519 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + P +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MTLRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V+N TDIDDKI++RA E N +++ ++ +N F D L L P
Sbjct: 61 D--VRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT + + LI + G AY A ++ F YG S R + EQ+
Sbjct: 113 PRATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVA 172
Query: 183 Y----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK + EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A E A +W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 233 DLVFPHHENEIAQSEAATGQE-LAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+RL +L HYR+P+DFT + L A
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPA 345
Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
S + + A+ +DLN+ A+ L LA+ + L
Sbjct: 346 LAPVALVAPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDR 405
Query: 384 ----------------IFNASAHILGI--EVCKEHLNKNIS----IAIEKLVQERLILLK 421
+ A +LG+ E E I+ + R+
Sbjct: 406 ADRPADELAALALRWRLLRDLAAVLGLRREADSESSGPGDDSTNQDEIQAAIDARIAAKS 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD IR +L+++G L D +T W ++
Sbjct: 466 AKNYAEADRIRDELKAQGIELIDKPGG-----ITEWIRR 499
>gi|332291036|ref|YP_004429645.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
gi|332169122|gb|AEE18377.1| cysteinyl-tRNA synthetase [Krokinobacter diaphorus 4H-3-7-5]
Length = 494
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 154/494 (31%), Positives = 228/494 (46%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YN+L K F+ + + MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 DQELTVYNSLSGKKELFKPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E + K T F
Sbjct: 66 Y--KVRYVRNITDAGHLTDDADQGEDKIAKKARLEKIE------PMEVVQKYTLDFHDIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
+ L P+ +P AT HI + + +I+ II +G+AYE N + FD S R
Sbjct: 118 NKFNFLPPSIEPTATGHIIEQMEIIKKIIDNGYAYEKNGSVYFDVVKFNKDHEYGKLSGR 177
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR + +NP DF LWK++ P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMIANTRTLNAQDEKENPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ+ A E W+H L L G+KM+KS GN I
Sbjct: 238 LGDQFDIHGGGMDLKFPHHECEIAQNEAALGTEP-VRYWLHANMLTLNGQKMAKSTGNSI 296
Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+ + + + V R +L T YR +DF+ L +E + +
Sbjct: 297 NPGEIFSGDSEHLSKGFAPSVARFFILQTSYRSIMDFSNDALLASEKGFHRLMEALKIAK 356
Query: 346 -------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
+ +A+ +D NT I L + ++ D A
Sbjct: 357 NLTVSKESSFDVTAWKQSCYNAMNDDFNTPILIAQLFEAVKQIHLIKDGKATITAEDLKL 416
Query: 388 --------SAHILGIEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+E + S +E L++ R + K F+ +D IR +L
Sbjct: 417 LLDTLEAFVFDVLGLEDNNAFAKADDSKLNGTVELLIKLRKEARENKDFALSDKIRDELI 476
Query: 437 SKGFILEDYKNPDN 450
G L+D + +
Sbjct: 477 ELGIQLKDSREGTS 490
>gi|299142423|ref|ZP_07035555.1| cysteine--tRNA ligase [Prevotella oris C735]
gi|298576145|gb|EFI48019.1| cysteine--tRNA ligase [Prevotella oris C735]
Length = 496
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 155/502 (30%), Positives = 233/502 (46%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++ + IYNTL R+ F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQNLIIYNTLTRQKELFKPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQYYTNRYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD S
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + +R + +K DF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLTDMINNSRELQGVGEKKNQVDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + +++ IR +L HYR +DF+ + L A+ +
Sbjct: 292 ITLEQFFTGNHESLTQAYTPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDL 351
Query: 345 GIID-----------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+ A+ +DL T I L + D A
Sbjct: 352 ERVPVSSHCDAETDKFVKAFRQRCYEAMNDDLQTPLVISYLFEACHLINTLLDHKAEICA 411
Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ K N A ++ ++ R K ++++D
Sbjct: 412 DCLKELSDVLKLFAFDLLGLQSEKGANNVAREEAYGKVVDMVLDLRAKAKADKDWTTSDK 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L + GF ++D K+ +
Sbjct: 472 IRDALAAAGFEVKDTKDGVTWK 493
>gi|254994905|ref|ZP_05277095.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
Length = 466
Score = 360 bits (923), Expect = 4e-97, Method: Composition-based stats.
Identities = 193/484 (39%), Positives = 272/484 (56%), Gaps = 47/484 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL F + + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+ Y
Sbjct: 1 MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII A E N +I+ +T+ T+ F +D L CL+PT +PR
Sbjct: 59 EVIYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+++I +I GHAY + F S +YG+ S RK+ + G+RV
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T ++ W SPWG GRPGWH+ECSAMS YLG FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENEI+QSCCA + A W+HNGFL + G KMSKS GN IT+ LL
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLS------ 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------ID 348
VIR L THYR+P+D+ + + +A+ L+K ++ +
Sbjct: 287 NGVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLN 402
AV+++L +D+NT +AI ALH+L +E K ++ L + N SA ++G+
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406
Query: 403 KN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
I +L+++R+ K F AD IR+ L + G + D K+ TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461
Query: 457 WKQK 460
W +K
Sbjct: 462 WHRK 465
>gi|312138100|ref|YP_004005436.1| cysteine-tRNA ligase cyss [Rhodococcus equi 103S]
gi|325674996|ref|ZP_08154683.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|311887439|emb|CBH46751.1| cysteine-tRNA ligase CysS [Rhodococcus equi 103S]
gi|325554582|gb|EGD24257.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 469
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 154/476 (32%), Positives = 234/476 (49%), Gaps = 46/476 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T+ R +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MTLRLYDTVTRAPRDFVPLTPGHASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLLAHDY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + + F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILNKAAEAG------RPWWEWAATFERSFDWAYRQLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ ++Q +I +GHAY + ++ FD S P YG S K+D+ G
Sbjct: 113 PRATGHVTQMVEMMQRLIDNGHAYASGGDVYFDVRSFPEYGRLSGHKLDDVHQGESAGAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+ YLG+ FDIH GGLDL+F
Sbjct: 173 --KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHLECSAMAVFYLGQAFDIHCGGLDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ CA + A W+HNG++ G KMSKS GN +++ +L+ +
Sbjct: 231 PHHENEIAQAKCAG--DDFAQYWLHNGWVTKSGEKMSKSLGNVLSVPNVLKLVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------WPQTSTSKGIIDPAVLS 353
+R + HYR ++++ + L EA + G +
Sbjct: 283 -PQELRYYLGSAHYRSMLEYSEEALQEAAAGYRRCESFVQRTAERAGEVQVGKWTEEFAA 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
AL +DLN +A+ +H RE + L A ILG++ E
Sbjct: 342 ALDDDLNVPAALAEIHGRVREGNIALESGDADGARALAGQVRAMLGILGVDPLDEQWTAA 401
Query: 405 ISIA---------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
A ++ + R K ++ AD +R +L + G + D +
Sbjct: 402 SDDAAAMGALDVLVQAELDRRQQARADKNWAVADEVRDRLAAAGIAVTDTPSGPEW 457
>gi|255010223|ref|ZP_05282349.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313148019|ref|ZP_07810212.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313136786|gb|EFR54146.1| cysteinyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
Length = 491
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 170/497 (34%), Positives = 250/497 (50%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTRL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKKILDAGYAYESQGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQEEKHNPADFALWKRAQPEHIMRWPSPWGDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR P+DF+ + L AE LS+ +
Sbjct: 292 ITLDEFFSGSHKLLTQAYSPMTIRFFILQAHYRSPVDFSNEALQAAEKGLSRLMEAVDGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L A+
Sbjct: 352 EKITPAATSNVDVKSLRTKCFEAMNDDLNTPIVISHLFDGAKMINNIIAGNNTISADDLK 411
Query: 380 DLLPIFNASA-HILGIEVC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+L +F+ ILG++ + ++ L+++R+ K ++++D IR +L
Sbjct: 412 ELKEVFHTFCFDILGLKEEIGSSDGREAAYGKVVDMLLEQRVKAKANKDWATSDLIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDTKDGFEWK 488
>gi|209518045|ref|ZP_03266876.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
gi|209501549|gb|EEA01574.1| cysteinyl-tRNA synthetase [Burkholderia sp. H160]
Length = 476
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 254/486 (52%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFDV+ R LR
Sbjct: 12 MES-LRIYNTLARDKQTFVPLREGVVRMYVCGMTVYDYCHVGHARVMVVFDVVQRWLRTL 70
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII+RA + + I +T + +D L P
Sbjct: 71 GY--NVTYVRNITDIDDKIIKRAVENG------ETIKSLTDRFIAALHEDADALGIARPD 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + YG S + +++ + G RV
Sbjct: 123 IEPRATDFIPQMLGMIETLEKNGYAYQASDGDVNYAVRKFEGYGKLSGKSLEDLRAGERV 182
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK++ P EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 183 AANDAKQDPLDFVLWKQAKPEEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEQFDIHGG 242
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 243 GQDLQFPHHENEIAQSEAATG-QTFVNYWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 298
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R + HYR P++++ + +A L++
Sbjct: 299 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALARLYTALKDVTPDTAALDWNEA 354
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A+ L +LA E + D L A +LG+ +
Sbjct: 355 YAQRFQTAMNDDFNTPVAVSVLFELATEVNRTRDPALARQLRALGAVLGLLGREPRAYLQ 414
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
AIE + R+ + K +++AD IR +L G LED
Sbjct: 415 HAAGAAAEGALEPAAIEAKIAARIAAKQAKDYAAADRIRAELLDAGVALEDKPGGL---- 470
Query: 454 MTRWKQ 459
T W++
Sbjct: 471 -TEWRR 475
>gi|222475063|ref|YP_002563478.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
gi|255003041|ref|ZP_05278005.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
gi|222419199|gb|ACM49222.1| cysteinyl-tRNA synthetase (cysS) [Anaplasma marginale str. Florida]
Length = 466
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 193/484 (39%), Positives = 272/484 (56%), Gaps = 47/484 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL F + + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+ Y
Sbjct: 1 MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII A E N +I+ +T+ T+ F +D L CL+PT +PR
Sbjct: 59 EVVYVRNITDVDDKIINAAESE------NKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+++I +I GHAY + F S +YG+ S RK+ + G+RV
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T ++ W SPWG GRPGWH+ECSAMS YLG FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENEI+QSCCA + A W+HNGFL + G KMSKS GN IT+ LL
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLS------ 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------ID 348
VIR L THYR+P+D+ + + +A+ L+K ++ +
Sbjct: 287 NGVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLN 402
AV+++L +D+NT +AI ALH+L +E K ++ L + N SA ++G+
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406
Query: 403 KN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
I +L+++R+ K F AD IR+ L + G + D K+ TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461
Query: 457 WKQK 460
W +K
Sbjct: 462 WHRK 465
>gi|84503361|ref|ZP_01001430.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
gi|84388271|gb|EAQ01222.1| cysteinyl-tRNA synthetase [Oceanicola batsensis HTCC2597]
Length = 477
Score = 359 bits (922), Expect = 4e-97, Method: Composition-based stats.
Identities = 201/474 (42%), Positives = 268/474 (56%), Gaps = 46/474 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ N+ R+ F IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 3 EIRLTNSKTRRKEVFAPIDPENVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGA 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ VTYVRN TD+DDKI RA ++ AI IT + + +D L L PTH+P
Sbjct: 63 EAVTYVRNFTDVDDKINARAERDG------RAIREITDETIGWYHQDMEALGTLRPTHEP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+HIPQM+ +I+ +I GHAY A ++F S +YG+ S R +++ G RV
Sbjct: 117 RATDHIPQMVAMIEGLIASGHAYAAEGHVLFSVDSYADYGALSGRSVEDMIAGARVEVAP 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K+NP DF+LWK S PGW+SPWGRGRPGWHIECSAM+ LG FDIHGGG+DL FP
Sbjct: 177 YKRNPMDFVLWKPSPGDLPGWDSPWGRGRPGWHIECSAMADELLGPSFDIHGGGIDLQFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA AN+W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 237 HHENEIAQSCCARPEGGFANVWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLT---EAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
VIR L THYR +D+T ++ E + S +V+ L NDLN
Sbjct: 291 GEVIRFVFLGTHYRNNMDWTEEKSQQAKETLKAWFRLTSGVESDPYGLTSVVPYLANDLN 350
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC-KEHLNKNISIAIE--------- 410
T + L LA HD A+ +G+E + ++S I+
Sbjct: 351 TPGVLHELRNLA-----QHDAAGQLKAAMEFIGLEASGDWWVPGSVSKEIDGFVSHVSWS 405
Query: 411 ----------------KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
L++ R+ +K K FSS D ++ L + G + K
Sbjct: 406 GDLDPNVESRLSEISAALLRARIQAMKTKDFSSVDEMKAYLVAAGVEVRMSKEG 459
>gi|297826557|ref|XP_002881161.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297327000|gb|EFH57420.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 562
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 182/508 (35%), Positives = 259/508 (50%), Gaps = 74/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K++ ++NT+ RK F+ + MYVCG T YD +HIG+AR + FDVL R L++
Sbjct: 63 KELWLHNTMSRKKELFKPKIEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGY 122
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V+YVRN TD+DDKII RA + + + ++ + ++F +D +L CL P+ Q
Sbjct: 123 E--VSYVRNFTDVDDKIIARANE------LGEDPISLSRRFCEEFKRDMEQLQCLDPSVQ 174
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P ++HIPQ++ LI+ I+ +G+AY+ + +I F P YG S RK+++ + G RV
Sbjct: 175 PLVSDHIPQIVDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVD 234
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+PADF LWK + EP WESPWGRGRPGWHIECSAMS+ YLG FDIHGGG+DL+F
Sbjct: 235 TRKKHPADFALWKTAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVF 294
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSC A + WIHNGF+ ++ KMSKS GNF TI ++++ +
Sbjct: 295 PHHENEIAQSCAACD-SSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------Y 346
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+RL ++ THYR PI+++ L A + QT
Sbjct: 347 HPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESLLGEKDSTFGNDSVPS 406
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLL 382
++++ +DL T + A+ + + L
Sbjct: 407 DTLTTINTFHSEFVASMSDDLLTPVTLAAMSEPLKTINDIIHTRKGKKQARREESLKALE 466
Query: 383 PIFNASAHILG---------IEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADY 430
ILG +E KE K + + VQER K K++ +D
Sbjct: 467 TTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDA 526
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IRK L S G L D T W+
Sbjct: 527 IRKDLASVGIALMDS------PEGTTWR 548
>gi|297563235|ref|YP_003682209.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847683|gb|ADH69703.1| cysteinyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 467
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 161/480 (33%), Positives = 235/480 (48%), Gaps = 47/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T R++ EF + +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 1 MSLRFYDTSARQVREFVPLREGAASLYLCGATVQAPPHIGHIRSGVNFDILRRWLTHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+ RN+TDIDDKII A E ++ +N + F L CL PT +
Sbjct: 61 D--VTFCRNVTDIDDKIIRVASDEGV------PWWQVSERNQRAFTHAYEILGCLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P+MI L+ +I GHAY + + ++ FD S P YG S +++D+
Sbjct: 113 PRATGHVPEMIDLMHRLIDAGHAYAASDGSGDVYFDVRSYPPYGGLSNQRLDQVVESADC 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM++ YLG FDIHGGGLD
Sbjct: 173 DADRDKRDPRDFALWKGAKPGEPSWHTPWGRGRPGWHLECSAMATKYLGPSFDIHGGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE+AQS A A W+HNG L + G KMSKS GN + I +++
Sbjct: 233 LVFPHHENELAQSRAAGDG--FAQYWLHNGLLVVGGEKMSKSLGNSLLIPQMV------- 283
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
R +R + HYR ID++ L EA + +
Sbjct: 284 RKVRPVELRYYLGQVHYRSVIDYSDAALQEAATAYQRIEGFLTRAVEVLGEVAPAADVPA 343
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH 400
SAL +DL A+ +H RE ++ +LG++ E
Sbjct: 344 EFASALNDDLGVSQALAVVHGHVREGNTALAAGGKEQAAEIAGELRTMLGVLGLDPLGEQ 403
Query: 401 L----NKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + ++ L +++R K +++AD IR QL G ++ED
Sbjct: 404 WATGGDQGLREVVDALVAVALEQRQAARGRKDYAAADAIRDQLAGAGVVVEDTPEGPRWD 463
>gi|220904715|ref|YP_002480027.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|254781675|sp|B8J0S2|SYC_DESDA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219869014|gb|ACL49349.1| cysteinyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 483
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 237/499 (47%), Gaps = 69/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNTL R+ EF + P + MYVCG T YD+ HIG+AR +VFDVL R LR+ +
Sbjct: 1 MLLYNTLGRQKEEFTPLRPGKVHMYVCGITAYDYCHIGHARSALVFDVLVRQLRHMGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII RA +E + F +D RL +PR
Sbjct: 60 -VTFVRNFTDVDDKIINRANKEGLD------WREVAQTYINAFYEDMDRLGVQRADVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+HI ++ L ++ G AY + ++ F S P YG S R +DE G RV
Sbjct: 113 ATDHIQEIQDLCAKLVAEGKAYATTSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG GRPGWHIECSAMS YL DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSESYL--PLDIHGGGQDLVFP 230
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A W+HNGF+ + KMSKS GNF TI ++LE+ +
Sbjct: 231 HHENEIAQTEAVCHCH-LARYWVHNGFVQVNAEKMSKSLGNFKTIRDILES-------YL 282
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPAVL 352
+R +L HYR PIDFT + + EAE L + K + +
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKALHRVYTALLETQKALTREKWKKSPLPAQLT 342
Query: 353 SAL-----------YNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASA 389
+DLNT A+ + R + DLL F A A
Sbjct: 343 EDWAAQAEALDEAMNDDLNTAQALGHIFTQVRLVNRLLEDKTLRAAEAGRDLLQDFLARA 402
Query: 390 HI----LGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
LG+ + +E L+QER K F+ +D +R+
Sbjct: 403 EQWNTRLGLFGQQPEAFLADLRRIRAARRNIDIPRVEALLQERQEARANKDFARSDALRQ 462
Query: 434 QLESKGFILEDYKNPDNGQ 452
L G ++D N
Sbjct: 463 ALLDLGVSVQDTPEGQNWD 481
>gi|109898207|ref|YP_661462.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
gi|109700488|gb|ABG40408.1| cysteinyl-tRNA synthetase [Pseudoalteromonas atlantica T6c]
Length = 464
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 173/500 (34%), Positives = 250/500 (50%), Gaps = 81/500 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R+ F + S + +YVCG TVYD +H+G+AR + FD++ R LR+ E
Sbjct: 1 MLHIYNTLTRQKELFTPLHESKVGLYVCGITVYDLSHMGHARTYLSFDLMVRYLRHKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + + S +T + D + LAP +P
Sbjct: 61 --VNYVRNITDIDDKIIQRANENG------ETTSELTERTIAMMHDDFAAIGLLAPDIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T H+P++I +I+ +I GHAY+ + +++FD SS +YG S++ +D+ MG+RV
Sbjct: 113 RVTTHMPEIIAIIERLIQRGHAYQAKSGDVLFDVSSYADYGKLSKQDLDQLNMGSRVDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+ +LG+ FDIHGGG DLIF
Sbjct: 173 SDKDDPMDFVLWKTAKPGEPSWQSPWGDGRPGWHIECSAMNQKHLGEHFDIHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N W+H G + ++ KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEVAQSCCAYDT-PYVNYWVHAGMVQVDSEKMSKSLGNFFTLRDVL-------QQH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
A +R ++ HYR + ++ +T+A L + Q
Sbjct: 285 DAETLRYFLMSAHYRSQLSYSQSNITQARSALERLYTSLRDVKANTQVDMHSADYLTRFD 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNH-----------DLLPIFNASAHILGIE------ 395
A+ +D NT A+ L +A+E + DL + +LGI
Sbjct: 345 KAMDDDFNTPEAMAVLFDVAKELNRAKAEGQEGHERASDLAGVLINLGKVLGILQRSPSE 404
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ---------------LESKG 439
+ E + + IE L++ R L +
Sbjct: 405 YLQGEQQDDDEVAEIEGLIKARND---------------ARAAKDWAAADAARDGLNALN 449
Query: 440 FILEDYKNPDNGQRMTRWKQ 459
ILED G T W++
Sbjct: 450 IILED------GPSGTTWRK 463
>gi|310820623|ref|YP_003952981.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309393695|gb|ADO71154.1| Cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 488
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 173/503 (34%), Positives = 244/503 (48%), Gaps = 68/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I ++NTL + +P +R+YVCGPTVY + HIGNAR FDV+ R LRY
Sbjct: 4 SSIALFNTLTMQKEPLVTAEPGVVRLYVCGPTVYSYIHIGNARTFTSFDVVVRYLRYRGY 63
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRN TD+DDKII+ A + + + + + F DT L + P
Sbjct: 64 --RVHYVRNYTDVDDKIIKAAHETG------EEPVALAGRFVKIFQDDTRALHLVEPDVA 115
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ + H+P+++ +I+ ++ G AYE+ ++ F SS P Y S+RK+D+ G RV
Sbjct: 116 PKVSEHLPEILRIIETLVAKGVAYESQGDVYFSVSSYPEYAKLSKRKLDDLCAGERVQPG 175
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ P DF LWK + P EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGG LDLIF
Sbjct: 176 EQKREPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSAKYLGESFDIHGGALDLIF 235
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H GFL++EG KMSKS GN + + + L
Sbjct: 236 PHHENEIAQSEAASG-KPFAKYWMHCGFLDIEGAKMSKSLGNVVRLRDALTRV------- 287
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
A +R L THYR P+ F+ + + ++E L + +T
Sbjct: 288 DAEALRFFFLSTHYRHPLHFSDKAIADSEYRLEYFYETLRKVDERVGGKDFGQGPLHGEP 347
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNAS 388
+A+ +D N A+ AL L + D L
Sbjct: 348 GRFLQEFEAAMDDDFNCPGALGALSGLFGLMNELTDKPPVKDKALVGRTLQALRDTVRKV 407
Query: 389 AHILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +LG+ +E+L+ ER K K F+ AD +R +L+
Sbjct: 408 SSVLGLFEDDPTQWLLRRRDRAVKERGIDVAQVERLLSERNEARKSKNFAEADRLRSELK 467
Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
+G + D T WK
Sbjct: 468 GQGVEIMDT------VAGTSWKV 484
>gi|33863429|ref|NP_894989.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33640878|emb|CAE21334.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
Length = 511
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 171/515 (33%), Positives = 237/515 (46%), Gaps = 81/515 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ NTL R+ F + ++ +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 14 SLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY- 72
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TDIDDKI++RA ++ S + I+ +N + F +D L L P P
Sbjct: 73 -TVTFVQNFTDIDDKILKRAAEKECS------MQEISEQNIEAFHQDMDSLGILRPDRMP 125
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
RAT + + LI + G AY + ++ F YG S R ++EQ+
Sbjct: 126 RATQCLDGIRSLIGELEASGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVAD 185
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK + EP + SPWG GRPGWHIECSAM LG+ DIH GG D
Sbjct: 186 AEEARKQHSFDFALWKGAKSGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGAD 245
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A ++ A W+HNG +N+ G+KMSKS GNF TI LLE
Sbjct: 246 LIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLE------ 298
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
+RL +L HYR+P+DFT + A
Sbjct: 299 NGVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYSETLNWPECKPL 358
Query: 338 ---------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----- 383
P I + AL +DLN+ AI L LAR + L
Sbjct: 359 PQGVIQAAHPSNQEQCNKIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLKRGDTK 418
Query: 384 ---------------IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKM 422
+ A++LG+E K E N+ I++ + R
Sbjct: 419 AIQETAKLNLLPRWQLLVELANVLGLEAEKAAQPAPERNNRVDENHIQRAIATRKEAKAA 478
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ F+ AD IR +L ++G L D T W
Sbjct: 479 RDFAKADLIRDELRAQGIELIDKPGGL-----TDW 508
>gi|309781263|ref|ZP_07676000.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
gi|308920084|gb|EFP65744.1| cysteine--tRNA ligase [Ralstonia sp. 5_7_47FAA]
Length = 463
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 178/491 (36%), Positives = 254/491 (51%), Gaps = 61/491 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAA 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + +S +T + +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETMSALTGRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ + ++ + P YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGRLQTNGLAYQATDGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG+ FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKAEEPAESRWASPWGEGRPGWHIECSAMSCELLGEHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 232 GADLQFPHHENEIAQSEGATG-KTFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + A V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KLYDAEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAAAGAKPDWNE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-- 401
L A+ +D NT A+ L +LA E K L A A +LG+ H
Sbjct: 344 SHGKRFLEAMNDDFNTPVAVSVLFELASEVNKTRSPALASQLAALAGVLGLLGRDPHAFL 403
Query: 402 ------NKNISIAIEKLVQERLILL-------KMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + +E ++ER IR L + G +LED
Sbjct: 404 QGGVSPDGLDAAEVEARIEERRAAKAARDFARAD-------AIRADLLAAGIVLEDKPGG 456
Query: 449 DNGQRMTRWKQ 459
+T W++
Sbjct: 457 -----VTEWRR 462
>gi|114797963|ref|YP_761876.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
gi|123027646|sp|Q0BXB7|SYC_HYPNA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|114738137|gb|ABI76262.1| cysteinyl-tRNA synthetase [Hyphomonas neptunium ATCC 15444]
Length = 461
Score = 359 bits (922), Expect = 5e-97, Method: Composition-based stats.
Identities = 194/483 (40%), Positives = 270/483 (55%), Gaps = 49/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IY+T RK F+ D + +YVCGPTVY++AHIGNARP +VFDVL R+L YG
Sbjct: 1 MTLRIYDTAARKKRVFEPQDAKRVTLYVCGPTVYNYAHIGNARPPVVFDVLRRVLMARYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E + Y RNITDI+DKII S+ + IS IT K + D L +APT +
Sbjct: 61 EDAIVYARNITDIEDKIIAA------SVASGEPISAITQKYAAIYNADVEALNVIAPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+P+MI +I+ +I +AY + + F S+P+YG S RK ++ + G RV
Sbjct: 115 PWATGHVPEMIEIIEKLIRKKYAYVGDTGVWFSVPSMPDYGRLSGRKPEDNEAGARVAVD 174
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P+DF LWK + P EP W+SPWGRGRPGWHIECSAM++ +LG+ DIHGGG+D
Sbjct: 175 EDKRDPSDFALWKFAKPGEPEDAIWDSPWGRGRPGWHIECSAMAAKHLGRTIDIHGGGVD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS CA E A W+HNGFL++ G KMSKS GN +T+++LL
Sbjct: 235 LTFPHHENEIAQSECAHGEE-LARYWMHNGFLDMGGEKMSKSLGNVVTVHDLL------- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------DPAVLS 353
++WP V+R A+L HYR +D+T L +A+ L + D VL
Sbjct: 287 KAWPGEVLRFALLTAHYRAQLDWTEDLLKQAKTTLDRIYGALRRVWEADGGEARDTGVLR 346
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG-----------------IEV 396
AL +DL T A+ L +LA E+ DL A A+ G +
Sbjct: 347 ALEDDLGTPDALAELARLASEANTAADLKDAV-AMAN--GRANLLAAGKLLGLLTKTPKE 403
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
++ + + + I+ VQ R+ K ++ AD IRK L +G + D G +
Sbjct: 404 WEQGADTDENSRIDAQVQARVDARVAKDWAEADRIRKALAEEGVEIMD------GPAGST 457
Query: 457 WKQ 459
W++
Sbjct: 458 WRR 460
>gi|229009599|ref|ZP_04166825.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053936|ref|ZP_04195370.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|229131097|ref|ZP_04260009.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|229165078|ref|ZP_04292873.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228618341|gb|EEK75371.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH621]
gi|228652310|gb|EEL08235.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721354|gb|EEL72875.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751621|gb|EEM01421.1| Cysteinyl-tRNA synthetase [Bacillus mycoides DSM 2048]
Length = 449
Score = 359 bits (921), Expect = 5e-97, Method: Composition-based stats.
Identities = 165/472 (34%), Positives = 242/472 (51%), Gaps = 57/472 (12%)
Query: 20 AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+
Sbjct: 2 PLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKL 59
Query: 80 IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
I+ A + +P I + + + +D T L C T PR T ++ +I IQ +
Sbjct: 60 IKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQEL 113
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ G+AYE+ ++ F T YG S + I + + G R+ K++P DF LWK +
Sbjct: 114 VNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKE 173
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS +
Sbjct: 174 GEIFWESPWGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-K 232
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W+HNG++N+ KMSKS GNFI +++++ + + +IR ML HYR P
Sbjct: 233 TFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHP 285
Query: 320 IDFTVQRLTEAEILLSKWPQTSTSK---------------------GIIDPAVLSALYND 358
I+F+ L L + + A A+ +D
Sbjct: 286 INFSEDLLQSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQVAFEEAMDDD 345
Query: 359 LNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISI 407
NT +AI L+ +A + + + ILG+E+ +E L +
Sbjct: 346 FNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFSILGLELAQEEL---LDE 402
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE L+Q+R+ + + F+ +D IR L+ + ILED + TRWK+
Sbjct: 403 EIEALIQKRIEARQNRDFALSDQIRDDLKGRNIILEDT------AQGTRWKR 448
>gi|332141401|ref|YP_004427139.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
gi|327551423|gb|AEA98141.1| cysteinyl-tRNA synthetase [Alteromonas macleodii str. 'Deep
ecotype']
Length = 460
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 163/496 (32%), Positives = 245/496 (49%), Gaps = 77/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT R+ +F + + +YVCG TVYD +H+G+AR + FDVL R LR+ +
Sbjct: 1 MLHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYLRHLGLD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + ++ +T++ +D + L P +P
Sbjct: 61 --VKYVRNITDIDDKIIARANENG------ESFEALTARTIAMMHEDFAAINLLEPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ H+ ++I +IQ ++ G+AY+ + +++FD S +YG S++ +D+ K G RV
Sbjct: 113 TVSGHMDEIIEIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL F
Sbjct: 173 AGKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N+W+H G + + KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEVAQSCCAYDT-PYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
+ +R ++ HYR + ++ +T+A+ L + + + LS
Sbjct: 285 DSETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVVVNESTDLSYGGYLARFE 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKE------ 399
+ +DLN A L +ARE + D L + ILG+
Sbjct: 345 AAMNDDLNVPEAFSVLFDVARELNRQKDNAEEAGKLAAVLKGLGAILGMLQSDPDTYLKG 404
Query: 400 -HLNKNISIAIEKLVQERLILL---------------KMKKFSSADYIRKQLESKGFILE 443
N + + IE L+++R K G +LE
Sbjct: 405 GEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAK---------------GVVLE 449
Query: 444 DYKNPDNGQRMTRWKQ 459
D G T W++
Sbjct: 450 D------GPSGTTWRK 459
>gi|154490024|ref|ZP_02030285.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
43184]
gi|154089466|gb|EDN88510.1| hypothetical protein PARMER_00253 [Parabacteroides merdae ATCC
43184]
Length = 492
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 162/498 (32%), Positives = 234/498 (46%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ I IYNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHPISIYNTLTRKKEQFIPLHEPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQYYLNRYHHA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P A+ HI + I L++ I+ +G+AYE+ + FD +
Sbjct: 113 MEALNVLPPSIEPHASGHIIEQIELVKKILDNGYAYESEGSVYFDVEKYNKDHNYGVLSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K+NP DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIDDMLNTTRALDGQDEKRNPIDFALWKCAQPEHIMRWPSPWSDGFPGWHCECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQ+ + E + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQAVASQG-EDMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ E K +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 ITLEEFFTGDNKVLSQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLERLMDAYNHL 351
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ A+ +DLN+ I L AR D +A
Sbjct: 352 MKLKASDVSTVDVKDLRRKCYDAMNDDLNSPIVIAHLFDAARAINSVKDGKATISAEDLK 411
Query: 388 ---------SAHILGIEVCKEH----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
ILGI+ N+ A++ L+ R K ++++D IR +
Sbjct: 412 ELQDVFHTFVFDILGIKDEAASGGSNNNEAFGKAMDLLLTIRQQAKANKDWATSDKIRNE 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L + GF ++D K+ +
Sbjct: 472 LTAIGFDIKDTKDGAEWK 489
>gi|189465034|ref|ZP_03013819.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
17393]
gi|189437308|gb|EDV06293.1| hypothetical protein BACINT_01378 [Bacteroides intestinalis DSM
17393]
Length = 491
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 165/497 (33%), Positives = 245/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AY + + FD +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSNGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQGND-MVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 INLDEFFNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLGRMMDAVNGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L AR
Sbjct: 352 EKITPSATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITAEDLK 411
Query: 380 DLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
DL F+ ILG++ + + ++ L+++R++ K ++++D IR +L
Sbjct: 412 DLKETFHLFCFDILGLKEENDSNEEREVAFGKVVDMLLEQRMMAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K +
Sbjct: 472 TALGFEIKDGKEGSEWK 488
>gi|150024693|ref|YP_001295519.1| cysteinyl-tRNA synthetase [Flavobacterium psychrophilum JIP02/86]
gi|187629821|sp|A6GX80|SYC_FLAPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149771234|emb|CAL42703.1| Cysteine--tRNA ligase [Flavobacterium psychrophilum JIP02/86]
Length = 495
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 170/496 (34%), Positives = 229/496 (46%), Gaps = 56/496 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IKIYN+L + F I+ NI MYVCGPTVY H+GN R + FDV+YR +
Sbjct: 6 SQSIKIYNSLSGEKEIFSPINEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIYRYFLHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V Y+RNITD+ +DKI ++A+ E I + T F
Sbjct: 66 Y--KVRYIRNITDVGHIVDDVDHGEDKIAKKAKLEQLE------PMEIVQRYTVDFHNVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L P+ +P AT HI + I +++ II G YE+N + FD + +YG S R
Sbjct: 118 KAYNLLPPSIEPTATGHIIEQIEIVKTIINKGIGYESNGSVYFDVVKFNESNHYGKLSGR 177
Query: 169 KIDEQKMGTRVPE-KYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I++ TR + + K+N DF LWK++ P W SPW G PGWH+EC+AMS+ Y
Sbjct: 178 NIEDMLANTRDTDGQSDKRNHQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ E N W+H L L G+KMSKS GN I
Sbjct: 238 LGSHFDIHGGGMDLKFPHHECEIAQGEACTGQEP-VNYWMHANMLTLNGKKMSKSTGNNI 296
Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---- 341
+E+ F +++ A V R ML HYR +DFT + AE + +
Sbjct: 297 LPSEIYSGGSPFLTKAFSASVARFFMLQAHYRSNLDFTNDAILAAEKGFYRLMEAIGSLK 356
Query: 342 ------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHD 380
A+ +D NT I L + R D
Sbjct: 357 NTAQFTTSNTTSIDIKAWKQNCYDAMNDDFNTPILIAHLFEGVRFVNVLKENKETITTED 416
Query: 381 LLPIFNAS----AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
LL +LG+E K N N + +E L+Q R K F+ +D IR Q
Sbjct: 417 LLDFLTTMNAFVFDVLGLEDEKLATNNNDKLDGVVEMLIQMRKQARDNKDFAMSDQIRDQ 476
Query: 435 LESKGFILEDYKNPDN 450
L + G L+D K
Sbjct: 477 LLALGIQLKDSKEGTT 492
>gi|146300023|ref|YP_001194614.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
gi|187629820|sp|A5FHM5|SYC_FLAJO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146154441|gb|ABQ05295.1| cysteinyl-tRNA synthetase [Flavobacterium johnsoniae UW101]
Length = 492
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 163/493 (33%), Positives = 229/493 (46%), Gaps = 53/493 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KIYN+L + F+ I N+ MYVCGPTVY H+GN R + FDV++R +
Sbjct: 6 SQPLKIYNSLSGEKENFKPIHEGNVGMYVCGPTVYSNVHLGNVRTFMSFDVIFRYFLHL- 64
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YVRNITD+ +DKI ++AR E + + T F
Sbjct: 65 -DYKVRYVRNITDVGHIVDDVDEGEDKIAKKARLEQLE------PMEVVQRYTVDFHDIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L P+ +P AT HI + I +I+ II G YEAN + FD + NYG S R
Sbjct: 118 KAFNFLPPSIEPTATGHIIEQIEIIKKIIDTGIGYEANGSVYFDVVKYNETNNYGVLSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I++ + + K+NP DF LWK++ P W SPW G PGWH+EC+AMS+ Y
Sbjct: 178 NIEDMLANTRDLDGQSDKRNPQDFALWKKAEPEHIMRWPSPWSDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ+ N W+H L L G+KM+KS GN I
Sbjct: 238 LGNHFDIHGGGMDLKFPHHECEIAQNEACTGQSP-VNYWMHTNMLTLNGKKMAKSTGNNI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK- 344
E+L +++ A V R ML HYR +DF+ +T AE + + +
Sbjct: 297 LPGEILSGDNTILSKAFSASVTRFFMLQAHYRSILDFSDDAITAAEKGYKRLMEALEALP 356
Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
A A+ +D NT I L + R + +A
Sbjct: 357 AIKAGSSSSVDFAAWKQACYDAMNDDFNTPILIAQLFEAVRYINLLKEGKETISAEDLKS 416
Query: 388 --------SAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ K + N + + L+ R K F+ +D IR QL +
Sbjct: 417 FSTAINAFVFDVLGLSDEKAADGNNDKLEGVVNMLIGMRNQARADKNFALSDQIRDQLIA 476
Query: 438 KGFILEDYKNPDN 450
G L+D K +
Sbjct: 477 LGIQLKDGKEGTS 489
>gi|260062016|ref|YP_003195096.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
gi|88783578|gb|EAR14749.1| cysteinyl-tRNA synthetase [Robiginitalea biformata HTCC2501]
Length = 492
Score = 359 bits (921), Expect = 6e-97, Method: Composition-based stats.
Identities = 145/493 (29%), Positives = 221/493 (44%), Gaps = 53/493 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +K++N+L F I ++ MYVCGPTVY H+GN R + FD+++R LR+
Sbjct: 6 EQTLKVHNSLTGTKETFTPIHEGHVGMYVCGPTVYSNVHLGNCRTFMSFDLIFRYLRHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V +VRNITD +DKI ++AR E + + T F
Sbjct: 66 Y--KVRFVRNITDAGHLEDDADQGEDKIAKKARLEKIE------PMEVVQRYTVDFHNIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
R L P+ +P AT HI + I +I+ I+ G+AYE N + FD S R
Sbjct: 118 QRFNLLPPSIEPTATGHIVEQIEIIKVIMGRGYAYEKNGSVYFDVKRFNQDYEYGKLSGR 177
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR + +NP DF LWK++ P W SPWG G PGWH+EC+ MS+ Y
Sbjct: 178 KLEDMIANTRELTAQDEKRNPQDFALWKKAEPQHIMRWPSPWGEGFPGWHLECTVMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ+ A + W+H L L G+KM+KS GN +
Sbjct: 238 LGDTFDIHGGGMDLKFPHHECEIAQAE-AGNDQSPVRYWLHANMLTLNGKKMAKSTGNNL 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK- 344
E+ + + V+R M+ HY +D + + L AE ++ +
Sbjct: 297 LPGEIFSGENDILSKPFAPTVVRFFMMQAHYTSILDLSDEALLAAEKGYNRLMEAMEQLP 356
Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------ 386
A+ +D N+ I L + + D +
Sbjct: 357 GLPTGKTSDFDVAAWRQRCYDAMNDDFNSPVLIAQLFEAVKTINLVRDGKQSLSPADRDT 416
Query: 387 -------ASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ +LG+E + + + ++ ++ R K + ++D IR L
Sbjct: 417 LQETMEGFAFEVLGLEPGRSQTQETEKLEGVMKLVIDLRNQARANKDYHTSDQIRDTLSE 476
Query: 438 KGFILEDYKNPDN 450
G L+D K
Sbjct: 477 LGIQLKDGKEGTT 489
>gi|329936176|ref|ZP_08285969.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
gi|329304286|gb|EGG48166.1| cysteinel-tRNA ligase [Streptomyces griseoaurantiacus M045]
Length = 466
Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 163/484 (33%), Positives = 244/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD+L R Y
Sbjct: 1 MTIRLYDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN+TDIDDKII ++ + I +N + F + T L CL PT++
Sbjct: 61 D--VTFVRNVTDIDDKIITKSADQG------RPWWAIGYENERAFNEGYTALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA+ + FD S P Y S +++ + +
Sbjct: 113 PRATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPGYLELSNQEL-DNLQQPSSGGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP WE+PWG GRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFALWKAAKPGEPTWETPWGPGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DEFARYWLHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVVELAGGVVEPSAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ E
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G I+ED
Sbjct: 403 AANDGGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLIIEDSPQGPRWS 462
Query: 453 RMTR 456
R
Sbjct: 463 IGPR 466
>gi|170738802|ref|YP_001767457.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
gi|168193076|gb|ACA15023.1| cysteinyl-tRNA synthetase [Methylobacterium sp. 4-46]
Length = 460
Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 206/482 (42%), Positives = 276/482 (57%), Gaps = 51/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R F IDPS +RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+
Sbjct: 1 MAPLLRLYNTLTRAKEPFAPIDPSRVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL--- 117
YG VTYVRN+TD+DDKI RA + S I +T + F D RL L
Sbjct: 61 YGADAVTYVRNVTDVDDKINARAAERGVS------IRTLTDETLAGFHADLRRLGVLMPE 114
Query: 118 --------APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M +I+ ++ GHAY A + ++FD S+P+YG+ SRR
Sbjct: 115 DVNRPGARPAFIEPRATDHIAEMAQMIERLVAAGHAYLAEDHVLFDVPSMPDYGALSRRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S P EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPGEPAWPSPCGIAAPGRPGWHIECSAMSWRH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GG+DL+FPHHENE+AQS C AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
T+ E+L WP +RLAML THYR+PID+T++ L EA L +W ++ G
Sbjct: 295 TLREVLAD-------WPGEAVRLAMLRTHYRQPIDWTLRALEEASRTLERWYESVGDLGP 347
Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------- 395
+ V AL +DLNT +A+ LH+L + A A ++G+
Sbjct: 348 APAVPEGVRDALLDDLNTPAALGELHRL--------EDPAALKAGAGLMGLLGATRSARA 399
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ A+E L+ R K ++ +D +R L G ++D K+ T
Sbjct: 400 EAAVAASGIDVAAVEGLIAARKAARAAKNWAESDRLRGALAGMGVTVKDNKDGT-----T 454
Query: 456 RW 457
W
Sbjct: 455 TW 456
>gi|229496784|ref|ZP_04390495.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
gi|229316330|gb|EEN82252.1| cysteinyl-tRNA synthetase [Porphyromonas endodontalis ATCC 35406]
Length = 491
Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 164/499 (32%), Positives = 238/499 (47%), Gaps = 54/499 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +YNTL RK +F + ++ MYVCGPTVY AH+G+ARP I FD+LYR L +
Sbjct: 1 MEHPFYLYNTLSRKKEQFIPVAAPHVGMYVCGPTVYGDAHLGHARPAITFDILYRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DK+ ++AR E + ++
Sbjct: 61 GY--KVRYVRNITDVGHLEADADDGEDKVAKKARLEQLE------PMEVVQFYLTRYRHA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSR 167
L L P+ +P A+ HI + I L++ I+ G+AYE+ + FD YG S
Sbjct: 113 MEALNVLPPSIEPMASGHIIEQIRLVEEILKAGYAYESKGSVYFDVEKFNREKGYGKLSG 172
Query: 168 RKIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I++ TR + + +NP DF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNIEDMLSNTRTLDGQDEKRNPLDFALWKCAKPEHLMHWPSPWSEGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG +FDIHGGG+DL+FPHHE EIAQ+ A E W+HN + +EG+KM KS GNF
Sbjct: 233 YLGDLFDIHGGGMDLVFPHHECEIAQAEAAMGHE-LVRYWMHNNMITIEGKKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E ++ IR +L HYR +DF+ + L A L + +
Sbjct: 292 ITLDEFFAGSHPKLTEAYSPMTIRFFILGAHYRGTVDFSNEALQAARKGLMRLLDANALL 351
Query: 345 G-------------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLP 383
I+ + A+ +DLNT I L A + + D L
Sbjct: 352 DKLTPGATSTFDPKEIEKSAQEAMNDDLNTPIVIATLFDAATKINRLRNGEESLTQDDLA 411
Query: 384 IFN-----ASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG++ +E + A++ L++ R K ++++D IR +L
Sbjct: 412 ELKRVFRLYLFDILGLQDERESSSSGAEAYKGAMDLLMEIRKTAKDNKDWATSDKIRDRL 471
Query: 436 ESKGFILEDYKNPDNGQRM 454
GFI++D K
Sbjct: 472 AELGFIVKDTKQGAEWSLG 490
>gi|311740178|ref|ZP_07714010.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311304733|gb|EFQ80804.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 462
Score = 359 bits (920), Expect = 7e-97, Method: Composition-based stats.
Identities = 150/474 (31%), Positives = 224/474 (47%), Gaps = 41/474 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++IY+T R +F+ I P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MSTLRIYDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ +A + N S ++F K L + P+
Sbjct: 61 YD--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTR 178
+PRAT + QM+ +Q +I G AY A+ + FD ++ + +M
Sbjct: 113 EPRATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQG 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E K+ DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG FDIH GGL
Sbjct: 173 EGEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGGL 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I +LE +
Sbjct: 233 DLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR-- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVLS 353
+R + HYR ++++ LTEA + G
Sbjct: 289 -----PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFLGHFDDLELGEWTQGFAD 343
Query: 354 ALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D+ A+ +H R K L A AH+LG + +
Sbjct: 344 AMNDDIAVPKALAEIHTTVRAGNKALAAGDEAEARTLAGQVRAMAHVLGFDPLEWEDGAQ 403
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ ++ R K F++AD +R +L + G + D +
Sbjct: 404 ASGADAALDALVQAELERRTQARADKDFATADAVRDRLAAAGITITDTPDGPTW 457
>gi|99080994|ref|YP_613148.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
gi|123378967|sp|Q1GHI0|SYC_SILST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|99037274|gb|ABF63886.1| cysteinyl-tRNA synthetase [Ruegeria sp. TM1040]
Length = 457
Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats.
Identities = 206/456 (45%), Positives = 268/456 (58%), Gaps = 20/456 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++N+ RK F IDP N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG+K
Sbjct: 4 IKLHNSKTRKKEVFTPIDPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGDK 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RN TD+DDKI RA + AI ITS+ Q F++D L L PTH PR
Sbjct: 64 KVTYARNFTDVDDKINTRAAESG------RAIGEITSETIQWFLEDMGALGALQPTHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQMI +I+ +I HAYEA ++F S YG S R +D+ G RV
Sbjct: 118 ATEYIPQMIAMIEELIARDHAYEAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKNP DF+LWK S +PGWESPWGRGRPGWHIECSAMS LG+ FDIH GG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDADQPGWESPWGRGRPGWHIECSAMSHDLLGESFDIHCGGNDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA+ + A W+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGIP 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---YNDLN 360
V+R L THYR+P+D+T ++ EAE L KW + A + + +DLN
Sbjct: 292 GEVVRFVFLQTHYRKPMDWTEKKAAEAEATLRKWRALTAGIEPAATAAAAVVDALSDDLN 351
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL--NKNISIAIEKLVQERLI 418
T AI +HKLA L +LG E+ + + ++S +L + R
Sbjct: 352 TAGAIAEMHKLAAAGDGAGLLAA--GQLVGLLGDEMGEWAAAPSVDLSAHEARLFKARQA 409
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
++ K FS D ++ G + K
Sbjct: 410 AMETKDFSEVDRLKAAYTEAGLEVRMSKTGVELVPG 445
>gi|261252446|ref|ZP_05945019.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
gi|260935837|gb|EEX91826.1| cysteinyl-tRNA synthetase [Vibrio orientalis CIP 102891]
Length = 436
Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats.
Identities = 166/458 (36%), Positives = 236/458 (51%), Gaps = 47/458 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG T+YD HIG+ R + FDV+ R LRY + T+VRNITDIDDKII+RA +
Sbjct: 1 MYVCGVTIYDLCHIGHGRTFVSFDVVSRYLRYLGYDL--TFVRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++ +T + + D L P +PRAT +I ++I L++ +I G AY
Sbjct: 59 ------ESCDSLTERLIGEMHADFDALNMKRPDVEPRATEYIKEIIELVETLIERGFAYV 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++F+ + YG S + +++ + G RV + K++ DF+LWK S P EP WES
Sbjct: 113 ADNGDVMFEIAKYDEYGKLSGQDLEQLQAGARVEIESAKRSSLDFVLWKMSKPGEPTWES 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAM+S LG FDIHGGG DL FPHHENEIAQSCCA + N W+
Sbjct: 173 PWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQ-YVNTWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G + ++ KMSKS GNF TI ++L + A +R ++ HYR ++++
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEDN 284
Query: 327 LTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
L +A L + + A+ +D NT A L +ARE
Sbjct: 285 LNQARSALERLYTSLRGLDLTVSAVGGEEYVARFNDAMNDDFNTPEAYSVLFDMAREINR 344
Query: 377 -KNHDLLP------IFNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKM 422
K D+ A ++GI N + IE L++ R
Sbjct: 345 LKAEDVAAASSLGVTMRQLADVIGILHQDPEAFLKGDAGNDDEVAEIEALIKLRNDSRAS 404
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K +++AD R +L G +LED G T W++K
Sbjct: 405 KDWANADMARDKLTEMGIVLED------GPEGTTWRRK 436
>gi|254486794|ref|ZP_05099999.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
gi|214043663|gb|EEB84301.1| cysteinyl-tRNA synthetase [Roseobacter sp. GAI101]
Length = 481
Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats.
Identities = 210/478 (43%), Positives = 267/478 (55%), Gaps = 40/478 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT RK +F ID N+RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 4 IKLHNTKTRKREDFVPIDSDNVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHVYGPD 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA + S I IT++ TQ F+ D + L P H PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAESGRS------IGEITAETTQWFLDDMAAVGALEPDHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +IPQMI +I+ +I GHAY A ++F S YG+ S R ID+ G RV +
Sbjct: 118 ATAYIPQMIEMIEGLIAKGHAYAAEGHVLFAVESYKEYGALSGRSIDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG FDIHGGG DL+FPH
Sbjct: 178 KRNPMDFVLWKPSDGDTPGWDSPWGRGRPGWHIECSAMSYELLGAHFDIHGGGNDLMFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQSCCA AN W+HN L +EG+KMSKS GNF T+ +LL+ P
Sbjct: 238 HENEIAQSCCAHPGAGFANYWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------HGVPG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--SKGIIDPAVLSALYNDLNTV 362
VIR ML THYR+P+D+T ++ EA+ L W ++ L DLNT
Sbjct: 292 EVIRYVMLSTHYRKPMDWTEKKADEAKRKLKSWYDLVKGVEASKASRIIIDNLAEDLNTA 351
Query: 363 SAIQALHKLARE---------------------STKNHDLLPIFNASAHILGIE-----V 396
++ L +LA + + + +L F AS +LG+
Sbjct: 352 FTLRQLDQLAGDIVHNDKFDGQFEAGVPNAPQMARSSSELRSEFKASLQLLGLIGDEVPS 411
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
E ++S L R + ++ K FS D I+ L G ++ K
Sbjct: 412 WSEETAFDLSRFQRSLEAARSVAMQTKDFSGVDQIKNMLIGAGVQVQMSKEGVEVIAG 469
>gi|195953483|ref|YP_002121773.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|229558710|sp|B4U9I4|SYC_HYDS0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|195933095|gb|ACG57795.1| cysteinyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 488
Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats.
Identities = 170/509 (33%), Positives = 241/509 (47%), Gaps = 74/509 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+YNTL ++ EF I+P + +Y CG TVYD +H+G+ R +IVFDV R L
Sbjct: 1 MGFVLYNTLSAELEEFVPINPPQVNIYTCGVTVYDDSHVGHGRSLIVFDVFRRYLEKLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TDIDDKII +A +E N I ++ ++ D + +
Sbjct: 61 --RVKFVRNFTDIDDKIINKANEE------NKDFMSIANRYIARYYLDMEAINVKPANVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ ++I LI +I G AYE++ +I F S +YG S+R +E + G R+
Sbjct: 113 PRVTEHMEEIISLISKLIELGKAYESDGDIYFSIDSFKDYGKLSKRSPEELEAGARIEPS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK S EPGWESPW GRPGWH EC AM +LG+ DIH GG+DL+F
Sbjct: 173 LKKRNPLDFALWKASKSHEPGWESPWSYGRPGWHTECVAMIFKHLGETIDIHAGGIDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HNG + + G+KMSKS GNF+T+ E+ +
Sbjct: 233 PHHENEIAQAESITG-KPFARYWMHNGLVTVGGKKMSKSLGNFVTLKEIYT-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------- 348
V+RL +L THYR P+DF+ +++ E + + +
Sbjct: 285 HPDVLRLLVLFTHYRSPLDFSFEKMEETKKAYERLKSAIEDIEPLKAIAKEGKPVVDIDF 344
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNH--------------------- 379
AL D NT AI + E K
Sbjct: 345 YSLEKSTQEQFYKALSEDFNTSLAIAHIFNAVAELNKAKTESFKIGYITPKELEGYLFLA 404
Query: 380 -DLLPIFNASAHILG-------IEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSSADY 430
L +L ++ + + NIS +E L++ R + + K F AD+
Sbjct: 405 NSLKQTLKDIFGLLEENTLQNTLKTLEPASSVNISTEFLEILIKARNLAKENKDFKVADF 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR +L + G LED K T WK+
Sbjct: 465 IRDELLNYGIKLEDTK------AGTIWKK 487
>gi|254388528|ref|ZP_05003762.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294814057|ref|ZP_06772700.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
gi|326442461|ref|ZP_08217195.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197702249|gb|EDY48061.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294326656|gb|EFG08299.1| Cysteinyl-tRNA synthetase 1 [Streptomyces clavuligerus ATCC 27064]
Length = 466
Score = 359 bits (920), Expect = 8e-97, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 245/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT++RN+TDIDDKII+++ ++ I +N + F L CL PT++
Sbjct: 61 E--VTFIRNVTDIDDKIIKKSAEQG------RPWWSIGYENERAFNAGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA + FD S P Y S + +++ + +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEAEGNVYFDVRSFPGYLQLSNQDLEDLRQPAG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + A
Sbjct: 283 KPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIVGFMQRVCEKAGGAVEPAAEVPLAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAVIHTTVRQGNSALAADDKETAAARLAEVRAMLGVLGLDPFDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++Q+R K +++AD IR QL+ G ++ED
Sbjct: 403 GEAESGEDLHGAVDTLVRLVLQQREAARGRKDWATADAIRDQLQQSGLVIEDGPEGTRWS 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|302390937|ref|YP_003826757.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
gi|302203014|gb|ADL11692.1| cysteinyl-tRNA synthetase [Acetohalobium arabaticum DSM 5501]
Length = 481
Score = 359 bits (920), Expect = 9e-97, Method: Composition-based stats.
Identities = 177/503 (35%), Positives = 254/503 (50%), Gaps = 67/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL +K EF+ +D +++Y CGPTVYD+ HIGNAR I+ D+L R L Y
Sbjct: 1 MTLQIYNTLTQKKEEFEPLDQDEVKLYSCGPTVYDYFHIGNARAFILPDILKRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+DDK+I+RA I + + + +DT RL
Sbjct: 61 --NVLHVTNFTDVDDKMIKRAN------EEEIEIEELADRFITAYFEDTERLNIKQADVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI +I L++ + G+AYE + ++ F +YG S ++++E G+RV
Sbjct: 113 PKATEHISDIIELVKKLEDKGYAYEVDGDVFFAVRKFADYGKLSNQELEELTSGSRVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK+S EP WESPWG GRPGWHIECSAMS YLG+ FD H GG+DL+F
Sbjct: 173 DKKEDPLDFVLWKKSKEGEPSWESPWGTGRPGWHIECSAMSMCYLGEEFDFHTGGVDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + N W+HNG++N++G KMSKS GNF T ++L + +
Sbjct: 233 PHHENEIAQNEAGVGSQ-VVNYWLHNGYINVDGEKMSKSLGNFFTTRDIL-------QDY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
A V+R ++ HYR PI+F+ L A L + T +
Sbjct: 285 SAEVLRFFLISKHYRSPINFSDAELDNAAKSLQRLQNTVNKLKDLLDRDRADLKPGNKEE 344
Query: 348 -----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------- 382
A+ +DLNT AI ALH+LA+E +
Sbjct: 345 LQELEKKIKAKREKFEEAMDDDLNTALAIGALHELAKELNIVVNDADFELNQANIIVLEK 404
Query: 383 --PIFNASA-HILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
F + +LG +E + + S I L++ R + + + AD IR +L
Sbjct: 405 AYDTFKELSQQVLGINLETEDDISDNLTSDLIGLLLEVRNKARQNQDWELADQIRDELSE 464
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G ILED + T WK +
Sbjct: 465 LGIILEDT------PQGTDWKLE 481
>gi|257470811|ref|ZP_05634901.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|317065015|ref|ZP_07929500.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313690691|gb|EFS27526.1| cysteinyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
Length = 473
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 180/488 (36%), Positives = 257/488 (52%), Gaps = 57/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIYNTL K+ EF+ + + MYVCGPTVY++ HIGNARP I FD + R Y
Sbjct: 1 MIKIYNTLSGKVDEFKPVREGEVSMYVCGPTVYNYIHIGNARPAIFFDTVRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQ 122
V YV+N TD+DDK+I RA +E S+ I K + + +DT+++ +
Sbjct: 60 -KVKYVQNFTDVDDKMIRRANEEGVSL------KDIAEKYIKAYFEDTSKVNLKEAGMIR 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPE 181
P+AT HI MI +IQN+I G+AYEA ++ F+ + YG+ S++ +D+ K G R+
Sbjct: 113 PKATEHIGDMIEIIQNLIEKGYAYEAEGDVYFNVEKYKDGYGALSKQNVDDLKSGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK + EP WESPWG+GRPGWHIECSAMS YLG FDIHGGG DLI
Sbjct: 173 ADIKKSPVDFALWKAAKEGEPSWESPWGKGRPGWHIECSAMSHRYLGDTFDIHGGGQDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS C+ E A W+HNG++N+ G KMSKS G F+ + ++L+
Sbjct: 233 FPHHENEIAQSKCSCGGE-FARYWMHNGYININGEKMSKS-GTFMLLRQVLD-------Q 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
+ VIRL +L HYR+P+DF+ L +A+ L +
Sbjct: 284 FEGRVIRLFILGAHYRKPMDFSNYELNQAKSSLERIENALLRAKDALAADTKEDGADCAE 343
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--------------- 384
++A+ +D NT + A+ +L +E K + +
Sbjct: 344 LAEVLKSSSEKFVTAMDDDFNTAQGLGAIFELIKELNKALEEDKLSAKGKETVKETVDYV 403
Query: 385 FNASAHILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
N +LG I + S +E +++ R K ++ +D IR +L G ++
Sbjct: 404 VNIMQEVLGVILKLDNEVGNLTSELVEFILELRREARADKNWAMSDKIRDRLAEIGIKIK 463
Query: 444 DYKNPDNG 451
D K+
Sbjct: 464 DGKDTTTW 471
>gi|239981215|ref|ZP_04703739.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
Length = 466
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 162/484 (33%), Positives = 248/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD+L R Y
Sbjct: 1 MTIRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII+++ ++ I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIKKSAEQ------ERPWWAIGYENERAFNNGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAYEA+ + FD S P Y S + +DE + + +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL+ G ++ED
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIEDSPTGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|116491535|ref|YP_811079.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
gi|290891135|ref|ZP_06554197.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
gi|122276283|sp|Q04DQ8|SYC_OENOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116092260|gb|ABJ57414.1| cysteinyl-tRNA synthetase [Oenococcus oeni PSU-1]
gi|290479099|gb|EFD87761.1| hypothetical protein AWRIB429_1587 [Oenococcus oeni AWRIB429]
Length = 467
Score = 358 bits (919), Expect = 9e-97, Method: Composition-based stats.
Identities = 165/481 (34%), Positives = 245/481 (50%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NT K EF+ I P I MYVCGPTVY++ H+GNAR I FD + R L Y +
Sbjct: 1 MLKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII RA++E S + I SK + F +DT L + T +
Sbjct: 61 --VNFVSNFTDVDDKIINRAQEEGVSE------NAIASKYIKAFYEDTKPLNIIPATTRT 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP +I + ++I G+AYE+ + F NYG + +++ ++G
Sbjct: 113 RATEVIPDIIEFVSDLIDKGYAYESQGGVYFRVRKAGNYGLLAHENLEDLEVGASGRLDD 172
Query: 184 H----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK W+SPWG+GRPGWHIECS MS+ YLG DIHGGG+D
Sbjct: 173 GALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGYTIDIHGGGID 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH +E+AQS ++ + W+HNGF+N+ KMSKS GNF T++ELL +
Sbjct: 233 LAFPHHTDEMAQSEAHTG-KQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLSSYD--- 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
IR M THYR PI+++ L A + L + D
Sbjct: 289 ---DPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQ 345
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI 394
A + A+ +D N +A+ A+ +L R + K+ I A ++G+
Sbjct: 346 LVSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGV 405
Query: 395 EVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E +++ IE L+++R K + +D +R ++ S G+ + D N +
Sbjct: 406 FGISGLETKKESLPKKIELLLKKRETARINKNWQQSDQLRDEIFSLGYKVSDSSNGQQVR 465
Query: 453 R 453
+
Sbjct: 466 K 466
>gi|115352164|ref|YP_774003.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122322791|sp|Q0BDV4|SYC_BURCM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|115282152|gb|ABI87669.1| cysteinyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 465
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 175/486 (36%), Positives = 248/486 (51%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQSGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDI+DKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIEDKIIRRAVENG------ETIKSLTDRFIGAMHEDEAALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ A+ ++ + NYG S + +D+ + G RV
Sbjct: 112 LEPRATQFIPQMLGMIEKLETNGYAYQAADGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P W S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPPGATWASKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D+NT A+ L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDINTPVAVATLFELAGEINRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QATGAAQAGGLAADEIEAKIAARVAAKQAKDYAEADRIRAELLDAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|302530720|ref|ZP_07283062.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
gi|302439615|gb|EFL11431.1| cysteinyl-tRNA synthetase [Streptomyces sp. AA4]
Length = 461
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 157/476 (32%), Positives = 233/476 (48%), Gaps = 45/476 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R EF + +YVCG TV HIG+ R M+ +DVL R L +
Sbjct: 1 MALHLYDTATRAPREFTPVRSGTASIYVCGATVQGVPHIGHVRGMLNYDVLRRWLLHSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V VRN+TDIDDKI+ +A + + + F K L CL P+
Sbjct: 61 D--VLLVRNVTDIDDKILTKAADAG------RPWWEWAATHERAFEKAYEDLGCLPPSVT 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ L++ +I GHAY + ++ F S P YG+ S +++DE + G
Sbjct: 113 PRATGHVTQMVQLMERLIEAGHAYAVDGDVYFSVKSFPEYGALSGQQLDEVQQGETPTRG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG FDIHGGG+DL+F
Sbjct: 173 --KRDSRDFTLWKSAKPGEPSWPTPWGDGRPGWHLECSAMATNYLGAEFDIHGGGVDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A A W+HN ++ + G KMSKS GN ++I +LE +
Sbjct: 231 PHHENERAQSNAAGDG--FARYWLHNAWVTMSGEKMSKSLGNTVSIPAMLER-------Y 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSA 354
AP +R ++ HYR ++++ ++EA + G + +A
Sbjct: 282 RAPELRYYLVQPHYRSTVEYSDGAVSEAAQGYRRIEAFLRRAESAGAVPVGEVAAEFAAA 341
Query: 355 LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLN--- 402
+ +DL T +A +H R+ K +L +LG++
Sbjct: 342 MDDDLATPAAFAVVHNTVRDGNAALDSGDTTKALELAGTVRGMTGVLGLDPLSPDWADGG 401
Query: 403 ------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +E L+ ER K F+ AD R +L + G +ED N
Sbjct: 402 SDTPVRDALGTLVEALLAERQEARAAKDFARADAARDRLVAAGIAVEDTPNGPQWT 457
>gi|315923786|ref|ZP_07920016.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
gi|315622906|gb|EFV02857.1| cysteine--tRNA ligase [Pseudoramibacter alactolyticus ATCC 23263]
Length = 465
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 168/496 (33%), Positives = 252/496 (50%), Gaps = 79/496 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT+ ++ EF I+P +RMY CGPTVY++ HIGNARP IVFDVL R L Y +
Sbjct: 1 MKLYNTMTQRKEEFVPIEPGKVRMYSCGPTVYNYFHIGNARPFIVFDVLRRFLEYIGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TD+DDKII R+ +E + I K ++ KD L T PR
Sbjct: 60 -VTFVQNFTDVDDKIINRSHEEGCTA------KEIADKYIAEYFKDADALGIRRATVHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
++ +P++I +++ + G AY + + P+YG S + + + + G R+
Sbjct: 113 VSDTMPEIIAMVKALEDRGLAYNVGGNVYYAVDRFPDYGKLSGQNVADLEAGARIDVNDE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K +P DF LWK++ P EP W+SPWGRGRPGWHIECSAMS +LG+ DIHGGG DLIFPH
Sbjct: 173 KHSPLDFALWKKAKPGEPYWDSPWGRGRPGWHIECSAMSRKFLGETIDIHGGGQDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + E A W+HNG++N+ KMSKS GNF T+ ++ +
Sbjct: 233 HENEIAQSEGSCGCE-FARYWVHNGYININDEKMSKSKGNFFTVRDI-------AGKYDL 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------- 343
V+R+ MLM HYR P++F+ + L A+ L ++
Sbjct: 285 EVVRMFMLMAHYRSPVNFSDELLASAQNALERFYNAKNQMIYLADHAEDRKPSPDEAAWI 344
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
++A+ +DLNT AI A+ +L R + L +F A +
Sbjct: 345 QSLTQYKNGFIAAMNDDLNTADAIAAMFELVRAANTALSESSPKSAVTAALKLFRELAGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLV--------------QERLILLKMKKFSSADYIRKQLES 437
+G+ ++ + ++ +E L+ + IR +L +
Sbjct: 405 IGL--AEKEPDSHLESEVEALIAERQAARRARDFARAD--------------AIRDELAA 448
Query: 438 KGFILEDYKNPDNGQR 453
+G +LED + +
Sbjct: 449 RGIVLEDTREGVKWHK 464
>gi|45358623|ref|NP_988180.1| cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|61216204|sp|Q6LYD1|SYC_METMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|45047489|emb|CAF30616.1| Cysteinyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 476
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 163/494 (32%), Positives = 242/494 (48%), Gaps = 59/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL R EF+ ++ ++MYVCGPTVYD H+G+ R + FD++ R L +
Sbjct: 1 MLKVYNTLTRCEEEFKTLNEKEVKMYVCGPTVYDNTHLGHGRTYVSFDIIRRYLEHMGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+RA ++ I+ + + F+ D L P
Sbjct: 60 -TVNLVINFTDIDDKIIKRAYEK------EKDPKEISEQFIKVFLDDMATLKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HI ++I I+ +I G AY+ + + F+ NYG S +++ G R+
Sbjct: 113 KVTEHISEIIAFIEKLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARIETSE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKN DF LWK + P EP WESP+G GRPGWHIECSAMSS YLG+ FDIHGGG DL FP
Sbjct: 173 KKKNQKDFALWKTAKPGEPKWESPFGSGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N W+H GF+ + G KMSKS GNF+TI ++ + +
Sbjct: 233 HHENEIAQSSAYSG-KDWVNYWLHTGFVMVNGEKMSKSLGNFVTIGDI-------SKEYS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------- 340
++R + HYR PID+T + + + L K
Sbjct: 285 PEILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRTWDENEFL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNA 387
+A+ +D NTV A++++ +++ K L L +
Sbjct: 345 LYDILKNSKNNFYNAMNSDFNTVKALKSVFEVSNGVNKYLSLTKTPSEGLLLKALDFYKI 404
Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ KE + + + L++ R + K + +D IR L++ G+ +ED
Sbjct: 405 IGEIFGLFENYFKESSDSDEEEFVTFLIELRSDVRLQKNYEMSDKIRDGLKNLGYQIEDN 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T +K+
Sbjct: 465 P-----KEGTVFKK 473
>gi|118587321|ref|ZP_01544748.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
gi|118432310|gb|EAV39049.1| cysteinyl-tRNA synthetase [Oenococcus oeni ATCC BAA-1163]
Length = 467
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 165/481 (34%), Positives = 246/481 (51%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NT K EF+ I P I MYVCGPTVY++ H+GNAR I FD + R L Y +
Sbjct: 1 MLKVFNTATLKKEEFKPIVPGKITMYVCGPTVYNYIHVGNARSSIAFDTIRRYLLYRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+DDKII RA++E S + I SK + F +DT L + T +
Sbjct: 61 --VNFVSNFTDVDDKIINRAQEEGVSE------NAIASKYIKAFYEDTKPLNIIPATTRT 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP +I + ++I G+AYE+ ++ F NYG + +++ ++G
Sbjct: 113 RATEVIPDIIEFVSDLIDKGYAYESRGDVYFRVRKAGNYGLLAHENLEDLEVGASGRLDD 172
Query: 184 H----KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK W+SPWG+GRPGWHIECS MS+ YLG DIHGGG+D
Sbjct: 173 GALALKEDPLDFALWKNEPRQVIKWDSPWGQGRPGWHIECSVMSTKYLGDTIDIHGGGID 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH +E+AQS ++ + W+HNGF+N+ KMSKS GNF T++ELL +
Sbjct: 233 LAFPHHTDEMAQSEAHTG-KQFVHYWLHNGFVNVNNEKMSKSLGNFTTVHELLSSYD--- 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
IR M THYR PI+++ L A + L + D
Sbjct: 289 ---DPMAIRFLMTATHYRRPINYSSSELERARVELDRIRTAYRRLKNADFKIGDDPQIDQ 345
Query: 349 ------PAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGI 394
A + A+ +D N +A+ A+ +L R + K+ I A ++G+
Sbjct: 346 LVSKQTAAFVEAMDDDFNVANALAAIFELVRLANSYVDSGDVKDKSAQEILRQIAELIGV 405
Query: 395 EVCK--EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E +++ IE L+++R K + +D +R ++ S G+ + D N +
Sbjct: 406 FGISGLETKKESLPKKIELLLKKRETARINKNWQQSDQLRDEIFSLGYKVSDSSNGQQVR 465
Query: 453 R 453
+
Sbjct: 466 K 466
>gi|148269355|ref|YP_001243815.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|170288013|ref|YP_001738251.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|281411948|ref|YP_003346027.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
gi|229558798|sp|A5IJ66|SYC_THEP1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558801|sp|B1L7Y7|SYC_THESQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|147734899|gb|ABQ46239.1| cysteinyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|170175516|gb|ACB08568.1| cysteinyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|281373051|gb|ADA66613.1| cysteinyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
Length = 460
Score = 358 bits (919), Expect = 1e-96, Method: Composition-based stats.
Identities = 164/472 (34%), Positives = 237/472 (50%), Gaps = 42/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I NTL K EF I P +RMYVCGPTVYD H+GNARP +VFDV R L Y
Sbjct: 1 MRITNTLTGKKEEFVPIQPGVVRMYVCGPTVYDLIHVGNARPAVVFDVFRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+N TDIDDKII +A Q + ++ +D L PR
Sbjct: 59 RVIMVQNFTDIDDKIINKANQLGVD------YKTVADTFIAEYWRDAHALGIRPANFHPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + ++ +I+ ++ G AY+ + FD YG S++KI++ G RV
Sbjct: 113 TTDFVDDIVEIIERLVEKGVAYQTETGVYFDVRKFEKYGELSKKKIEDLIAGARVEVDET 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK P DF LWK++ P EP W+SPWG GRPGWHIEC+ MS LG+ FDIH GG DL+FPH
Sbjct: 173 KKFPLDFSLWKKAKPGEPCWKSPWGEGRPGWHIECTVMSVKILGESFDIHAGGEDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A W+HNG + G KMSKS GN T+ E + + +
Sbjct: 233 HENEKAQAEALTG-KVFARYWMHNGMVRFLGDKMSKSTGNIFTVREAV-------KRYGR 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
+R +L HYR P+DF+ + L + + + P+ +
Sbjct: 285 DGLRYMILSKHYRSPMDFSEELLQDYSRAVKRVWEILGRYEKSGDIGIPKRNAVYEEYVN 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH----------ILGI-EVCK 398
+ AL +D NT A+ + +LAR +K D +A + +LG+ ++ +
Sbjct: 345 RFVEALDDDFNTPVAVSLIFELARNLSKAMDDNDREDALLYYHLIRREFGPVLGLFDLNE 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E + ++ L++ R +L K K++ +D IR L G IL+D +
Sbjct: 405 EKKEVSSEELLKLLIEVRDVLRKEKRYDLSDRIRDHLREIGIILKDTPSGTE 456
>gi|126661994|ref|ZP_01732993.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
gi|126625373|gb|EAZ96062.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BAL38]
Length = 494
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 164/495 (33%), Positives = 231/495 (46%), Gaps = 55/495 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL + F I NI MYVCGPTVY H+GN R + FDV++R L++
Sbjct: 6 NQTLHIYNTLSGEKETFTPIHEGNIGMYVCGPTVYSNVHLGNVRTFMSFDVIFRYLQHL- 64
Query: 62 GEKCVTYVRNIT---------DID-DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YVRNIT D+D D+ ++++R E I K T F K
Sbjct: 65 -DYKVRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLE------PMEIVQKYTVDFHKVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSR 167
L PT +P AT HI + I L Q +I G AYE+N + FD NYG S
Sbjct: 118 DTFNFLPPTIEPTATGHILEQIELTQKLIDTGFAYESNGSVYFDVFAYNQKGMNYGELSN 177
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I+E + + KKNP DF LWK ++P W SPWG G PGWH+EC+AMS+
Sbjct: 178 RNIEELFANTRDLDGQSEKKNPQDFALWKNASPAHIMRWNSPWGEGFPGWHLECTAMSTK 237
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL FPHHE E+AQ + N W+H L + G +MSKS GN+
Sbjct: 238 YLGETFDIHGGGMDLKFPHHECEVAQGKACNGHSP-VNFWMHTNMLTMNGLRMSKSTGNY 296
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
I EL+ F + + ++R L HYR +D + + +E S+ ++
Sbjct: 297 ILPMELVTGENTFFEKPFQPNIVRFCFLQAHYRSVLDISNDAMLASEKGYSRLMESYKLI 356
Query: 343 -----------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
+ A+ +D NT I L + AR +D
Sbjct: 357 PMLKASATSTLDIASWKQSCYDAMNDDFNTPILIAQLFEGARYINLVNDGKESLTTEHIQ 416
Query: 388 ---------SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+LG+ + + +S +E L+ R K F+ +D IR QL
Sbjct: 417 LLQNTISSFLFDVLGLSNEASGNSNTTEKLSGVVEMLIGMRNEARANKNFALSDQIRDQL 476
Query: 436 ESKGFILEDYKNPDN 450
+ G L+D K+ +
Sbjct: 477 LALGIQLKDGKDGTS 491
>gi|239942334|ref|ZP_04694271.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|239988799|ref|ZP_04709463.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291445792|ref|ZP_06585182.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
gi|291348739|gb|EFE75643.1| cysteinyl-tRNA synthetase 1 [Streptomyces roseosporus NRRL 15998]
Length = 466
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 161/484 (33%), Positives = 247/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLHDTSARQIRDFVPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSAEQG------RPWWSIGYENERAFNDGYDVLGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAYEA+ + FD S+P Y S +++D+ + + +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLELSNQELDDLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + AN W+HNG++ L G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DTFANYWVHNGWVTLAGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKVGETVAPAADVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ DL A+ +H R+ L A +LG++
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAAARLAEVRAMLGVLGLDPLDPQWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPTGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|154253106|ref|YP_001413930.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
gi|187629837|sp|A7HWJ0|SYC_PARL1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|154157056|gb|ABS64273.1| cysteinyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
Length = 468
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 190/481 (39%), Positives = 263/481 (54%), Gaps = 44/481 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K K+ +YNTL R+ F+ +P + MYVCGPTVY+ +HIGNARP +VFDVL
Sbjct: 7 KLKLSLYNTLTRQKEIFEPAEPDRVTMYVCGPTVYNRSHIGNARPAVVFDVLA--RLLRR 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V Y RNITDI+DKII A++ IS+IT K + + +D L LAP
Sbjct: 65 LYRHVVYARNITDIEDKIIAAAKEAGVD------ISVITEKYARIYREDMGALGVLAPDI 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+P+AT I +MI +++ +I G+AY A ++F+ S YG S R D+ G RV
Sbjct: 119 EPKATESIAEMISMMERLIASGNAYAAEGHVLFNVPSFAEYGRLSGRDRDDMIAGARVEV 178
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+KK+PADF+LWK STP +PGW+SPWGRGRPGWHIECSAM +LG+ DIHGGG+DL
Sbjct: 179 APYKKDPADFVLWKPSTPEQPGWDSPWGRGRPGWHIECSAMIEKHLGETIDIHGGGIDLQ 238
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS CA A W+HNGF+N+ KMSKS GN + ++ELL
Sbjct: 239 FPHHENELAQSSCAHGHTPLARFWLHNGFVNMGSEKMSKSLGNVLLVHELLAQA------ 292
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVL 352
P +RLA+L HYR+P+D++ + L +A+ +L + + + A +
Sbjct: 293 -PGEAVRLALLNAHYRQPLDWSDEGLAQAKRMLDRLYGALRALSDVKAEPTNDAAPDAFM 351
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEH------ 400
AL +DLNT A+ L LA+ + D L + +LG+
Sbjct: 352 EALADDLNTPKALAVLFDLAKRANTETDPGTKAQLKAALIGAGRLLGVLEMDPEAWFAGA 411
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +E+L+ R K K F+ AD IR L G +ED G + T W+
Sbjct: 412 GAASHIDGEEVERLIAARNAARKAKDFAEADRIRGALAEMGVAIED------GPQGTSWR 465
Query: 459 Q 459
Sbjct: 466 V 466
>gi|89890596|ref|ZP_01202106.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
gi|89517511|gb|EAS20168.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium BBFL7]
Length = 494
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 163/494 (32%), Positives = 243/494 (49%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K+++YN+L + F++I+ + MYVCGPTVY H+GN R I FD++YR L++
Sbjct: 6 DQKLQLYNSLTGEKEIFKSINEGLVGMYVCGPTVYSNVHLGNCRTFISFDMIYRYLQHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E I + T F
Sbjct: 66 Y--KVRYVRNITDAGHLTDDADEGEDKISKKARVEKLE------PMEIVQQYTLDFHNVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
+ L P +P AT HI + I +I+ II +G+AYE N I F+ + YG S R
Sbjct: 118 NKFNNLPPNIEPTATGHIVEQIEIIKTIIDNGYAYERNGSIYFNVLKFNEDHEYGKLSGR 177
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR + + NP DF LWK+++P W SPWG G PGWH+EC+ MSS Y
Sbjct: 178 KLEDMIANTRALDAQSEKDNPQDFALWKKASPAHIMRWPSPWGDGFPGWHLECTVMSSKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ A N W+H L L G+KMSKS GN I
Sbjct: 238 LGETFDIHGGGMDLKFPHHECEIAQGEAAHGHSP-VNYWLHANMLTLNGKKMSKSTGNSI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
EL F +++ V+R M+ HYR +DF+ + AE ++ + +
Sbjct: 297 LPEELFTGDNDFMEKAFSPSVVRFFMMQAHYRSVLDFSNDAILAAEKGFNRLSEAIKTID 356
Query: 346 IIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
+ P +A+ +D N+ I L + A+ +
Sbjct: 357 DLTPSKESSIDVPAWVERCYAAMNDDFNSPILIAELFEGAKMIHAVKEGKQTATAGDTEL 416
Query: 381 LLPIFNASA-HILGIEVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ FNA +LG+E + + + + A++ ++ R K ++++D IR QL
Sbjct: 417 IKETFNAFFYDVLGLETASKTGSTDSKHLDGAMQLIIDLRTQARANKDWATSDQIRDQLV 476
Query: 437 SKGFILEDYKNPDN 450
+ G L+D +
Sbjct: 477 AAGIQLKDGADGTT 490
>gi|59712207|ref|YP_204983.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
gi|71657967|sp|Q5E4F1|SYC_VIBF1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|59480308|gb|AAW86095.1| cysteinyl-tRNA synthetase [Vibrio fischeri ES114]
Length = 461
Score = 358 bits (918), Expect = 1e-96, Method: Composition-based stats.
Identities = 167/500 (33%), Positives = 246/500 (49%), Gaps = 82/500 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LR+ +
Sbjct: 1 MLKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENG------ETCDALTERLIADMHADFDALNMKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY +N +++F+ YG SR+ +++ + G+RV +
Sbjct: 113 RATEYIKEIIALVERLIERGFAYVASNGDVMFEVKKYDEYGCLSRQDLEQLQAGSRVTLE 172
Query: 183 YH--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++ DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL
Sbjct: 173 EASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 233 MFPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA------- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
+ + +R ++ HYR ++++ + L +A L + +
Sbjct: 285 HYDSETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLSVTPAGGEEFVGRF 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL-- 401
+A+ +D NT A L ++ARE + L + A +LG+ +
Sbjct: 345 STAMNDDFNTPEAYSVLFEMAREVNRLKTENIDTASKLGALMRELADVLGLLSQEPEAFL 404
Query: 402 ----NKNISIAIEKLVQERL-----------------ILLKMKKFSSADYIRKQLESKGF 440
+ + IE L++ R I +
Sbjct: 405 QGGSSNDDVAEIEALIKARNDARAAKDWAAADAARDAI-----------------AALNI 447
Query: 441 ILEDYKNPDNGQRMTRWKQK 460
+LED G T W++K
Sbjct: 448 VLED------GPEGTTWRRK 461
>gi|88606973|ref|YP_505147.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
gi|109894881|sp|Q2GKF4|SYC_ANAPZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|88598036|gb|ABD43506.1| cysteinyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
Length = 462
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 200/480 (41%), Positives = 262/480 (54%), Gaps = 44/480 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T F ID + +++Y CGPTVYD AHIGNAR +V+DVL+RLLR Y
Sbjct: 1 MKLYDTFSAAKRVFDPIDSACVKIYACGPTVYDLAHIGNARSAVVYDVLFRLLRELY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII A + I T + + F +D L CL+PT +PR
Sbjct: 59 EVIYVRNITDVDDKIINAAAETG------QNIGDFTERYIRYFHEDMDALNCLSPTVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+ LI ++ GHAY + F SS +YG S RKIDE G RV
Sbjct: 113 ATAEIDTMLQLISRLVESGHAYVKGGSVYFSISSHRHYGRLSGRKIDEMISGNRVSIDAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T + WESPWG GRPGWHIECSAMS YLG+ FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATEQDIKLGAAWESPWGGGRPGWHIECSAMSYRYLGESFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENE+AQ+ CA + A W+HNGFL + G KMSKS GN IT+ L +
Sbjct: 233 MFPHHENELAQNMCAFSGSEYARYWVHNGFLTVNAGEKMSKSLGNVITVRGLRNS----- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------TSKGIID 348
VIR L THYR+P+D+ + + +A+ LSK ++ +
Sbjct: 288 -GIEGAVIRYVFLCTHYRKPLDWNEKAIFDAQSALSKMRRSCEEFTSEELNSDIEAVGVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGI---EVCKE 399
+L AL +D+NT AI ALH L E K D L + N SA ++GI K
Sbjct: 347 NMLLEALKDDMNTPMAIAALHALVGEINKTTDFKERLKLARVLNRSAKLMGITDGFAGKS 406
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I++L++ R +S AD IR QL S G +++D K+ +TRW +
Sbjct: 407 AEEAVDVDKIQELLERRREARNGGNYSLADEIRDQLHSMGIVIKDDKDG-----VTRWSR 461
>gi|332521572|ref|ZP_08398025.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
gi|332042661|gb|EGI78861.1| cysteinyl-tRNA synthetase [Lacinutrix algicola 5H-3-7-4]
Length = 493
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 163/493 (33%), Positives = 231/493 (46%), Gaps = 53/493 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++IKIYN+L K F++I+ + MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 NQQIKIYNSLTGKKEPFKSINEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMVFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E I + T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDADVGEDKITKKARLEEIE------PMEIVQRYTVDFHNVI 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L P+ +P AT HI + I LI II +G Y N + FD S+R
Sbjct: 118 NTFNLLPPSIEPTATGHIIEQIELINAIIENGFGYVVNGSVYFDVHKYNETNDYGILSKR 177
Query: 169 KIDEQKMGTR-VPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR + + KKNP DF LWK++ P W SPW G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDLIHNTRALDGQSDKKNPQDFALWKKAEPTHIMRWPSPWSDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ+ A N W+H L L G +MSKS GN I
Sbjct: 238 LGNQFDIHGGGMDLKFPHHECEIAQNQAALGQSP-VNYWMHANMLELNGARMSKSTGNII 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
ELL +++ V+R M+ + YR +D T L +E ++
Sbjct: 297 NPAELLSGKNNIMSKAYNPSVVRFFMMQSAYRSVLDLTDNGLLASEKGFNRLMNAVADIE 356
Query: 346 -------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
+ A+ +D NT I L + + +
Sbjct: 357 KLKTANQTNFDIQAWKQSCYDAMNDDFNTPILIANLFEGVNQVNAIKEGSKTITTEDLKT 416
Query: 381 LLPIFN-ASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
L +FN ILG++ +E + +S A+E L++ R K F+ +D IR +L +
Sbjct: 417 LKDVFNIFVFDILGLKNNQESGAGTEKLSGAVELLIKLRQEARANKDFALSDKIRDELAA 476
Query: 438 KGFILEDYKNPDN 450
G L D +
Sbjct: 477 VGITLNDSREGTT 489
>gi|325479181|gb|EGC82278.1| cysteine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 472
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 162/487 (33%), Positives = 248/487 (50%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL R+ EF I+ + I+MYVCGPTVYD+ HIGNARP++VFD R + + +
Sbjct: 1 MKIHNTLTRQKEEFIPINENEIKMYVCGPTVYDYMHIGNARPLVVFDTFRRYMTFKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII ++ E + +T K + +++D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKSIAEGITT------KEVTDKYIKAYMEDAKDLNIDEENTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT + +I I+ ++ AYE+ ++ FD S +YG S + I++ G
Sbjct: 113 RATEVMDDIIAFIKGLVDKNMAYESEGDVYFDVSKADDYGKLSGKNIEDLVHGASNRLDT 172
Query: 184 HKKNPA----DFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF LWK++ E W SPWG GRPGWHIECS MS LG+ DIH GG
Sbjct: 173 ADGSKKKSPVDFALWKKTKKEGEISWSSPWGEGRPGWHIECSTMSKKILGETIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS + + AN W+HNG + ++G KMSKS GNF T++++
Sbjct: 233 DLEFPHHENEIAQSEGLN-EKTFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
+ + VIR +L T+YR+PI+FT + + +A+ L++ +
Sbjct: 285 KKEYDLGVIRFWLLTTNYRQPINFTREIIEQAKASLNRLTNAYFRLEDLITKAEEKAISE 344
Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---LPIFNASAHI- 391
+ + +DLNT AI L +A+ + + +
Sbjct: 345 EEKNLLENLDKFKENFIEVMDDDLNTADAITVLFDMAKFINTKLSETTSKEVLEKTFDLY 404
Query: 392 ------LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
LG+ K+ ++ ++ IE+L+++R + K K F++AD IR L + G ++D
Sbjct: 405 KDLFASLGLVAKKKEVDVDV-ERIEELIEKRSLAKKNKDFATADAIRDVLTAMGITIKDT 463
Query: 446 KNPDNGQ 452
+ +
Sbjct: 464 REGVKWE 470
>gi|126737778|ref|ZP_01753508.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
gi|126721171|gb|EBA17875.1| cysteinyl-tRNA synthetase [Roseobacter sp. SK209-2-6]
Length = 466
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 202/462 (43%), Positives = 267/462 (57%), Gaps = 23/462 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT RK +EF ID N+RMYVCGPTVYD AH+GNARP++VFD LYRLLR+ YG
Sbjct: 4 IKLHNTKTRKKSEFTPIDAKNVRMYVCGPTVYDRAHLGNARPVVVFDTLYRLLRHVYGAD 63
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRN TD+DDKI A ++ + + + +++ ++KD L + P H
Sbjct: 64 HVTYVRNFTDVDDKINATAVARKEAGAEGTLEELVHARSNETIDWYLKDMGALGAMQPDH 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG-SFSRRKIDEQKMGTRVP 180
PRAT +I M+ +I ++I GHAY A ++F S Y S R +D+ G RV
Sbjct: 124 MPRATEYIAPMVDMISDLISKGHAYAAEGHVLFAVDSWKEYYGRLSGRSVDDMIAGARVE 183
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+KKNP DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 184 VAPYKKNPMDFVLWKPSGDDLPGWDSPWGRGRPGWHIECSAMSYELLGDTFDIHGGGNDL 243
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA+ + A W+HN L +EG+KMSKS GNF T+ +LLE +
Sbjct: 244 MFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------Q 297
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSALYN 357
+P VIRL L THYR+P+D+T ++ EAE L KW + +VL A+ +
Sbjct: 298 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTDGVEPSAAPASSVLDAIAD 357
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT A+ LHKLAR AS ++G+ + E ++S +KL
Sbjct: 358 DLNTAGAVAELHKLARAGDAAG-----LLASGQLMGLLTNERGEWAETPKVDLSEYEDKL 412
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ R ++ K FS D ++ G + K
Sbjct: 413 AKARETAMESKDFSEVDRLKTAYIDAGLEVRMSKAGVELVPG 454
>gi|116071086|ref|ZP_01468355.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
gi|116066491|gb|EAU72248.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. BL107]
Length = 499
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 168/519 (32%), Positives = 236/519 (45%), Gaps = 81/519 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + P +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MTLRLTNTLTRRTEPFTPLRPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V+N TDIDDKI++RA E N +++ ++ +N F D L L P
Sbjct: 61 E--VRFVQNFTDIDDKILKRASDE------NSSMTAVSERNIDAFHADMDSLGILRPDSM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT + + LI+ + G AY A ++ F YG S R + EQ+
Sbjct: 113 PRATQCLDGIRALIRELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQENAGGRVA 172
Query: 183 Y----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK + EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEGARKQHPFDFALWKAAKEGEPSFPSPWGAGRPGWHIECSAMVRAELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A E A +W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 233 DLVFPHHENEIAQSEAATGQE-LAQVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+RL +L HYR+P+DFT + L A
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERHGQSLEWPATPA 345
Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
S + + A+ +DLN+ A+ L LA+ + L
Sbjct: 346 LAPVALVGPSNHPSEPLEPLQQRFIDAMDDDLNSSGALAVLFDLAKPLRALANRLERGDR 405
Query: 384 ----------------IFNASAHILGI--EVCKEHLNKNIS----IAIEKLVQERLILLK 421
+ A +LG+ E E I+ + R+
Sbjct: 406 ADRPADELAALALRWRLLRDLAAVLGLRCEADSETSGPGDDSTNQDEIQAAIDARIAAKS 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD IR++L+++G L D +T W ++
Sbjct: 466 AKNYAEADRIREELKAQGIELIDKPGG-----ITEWIRR 499
>gi|297623875|ref|YP_003705309.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
gi|297165055|gb|ADI14766.1| cysteinyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
Length = 486
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 167/490 (34%), Positives = 241/490 (49%), Gaps = 56/490 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL R+ F+ I P ++ MY+CGPTVY H+G+AR I+FDVL R L Y
Sbjct: 6 LQLYNTLTRRKEPFEPITPGHVGMYLCGPTVYSEPHLGHARGPILFDVLRRYLEYLG--L 63
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ +DK+++RA+ E I K + +L
Sbjct: 64 RVRLVTNITDVGHLTDDADDGEDKLLKRAKLEQLE------PMEIADKYFWAYFDAMAKL 117
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P PRAT HI + I + Q ++ G AYE + FD S+ YG S R +D+
Sbjct: 118 GVRRPDITPRATGHITEQIAMTQTLLERGLAYERGGNVYFDVSAWETYGELSGRNVDDLV 177
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
GTR+ + K +P DF LWKR+ W SPWG G PGWHIECS MS+ YLG FDI
Sbjct: 178 EGTRIATRSDKDDPRDFALWKRAEGGHLMRWPSPWGEGYPGWHIECSVMSTKYLGDAFDI 237
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGGLDLIFPHHE E+AQ+ A + A +W+H + LEG KM+KS G+F+T+ EL
Sbjct: 238 HGGGLDLIFPHHECELAQAKAAG--KPFARVWLHFNMVTLEGEKMAKSKGHFVTLEELF- 294
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------- 345
R + +R +L THYR DF+ L + L + + +
Sbjct: 295 ------RRFDPIAVRFHLLGTHYRSVSDFSEASLRASAQGLRRLREGYAALARAVEDGGD 348
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIF-NAS 388
+A+ +DLNT A+ L+ RE+ F +A+
Sbjct: 349 EDADPSPYRERFEAAMNDDLNTAQALAVLYDALRETNAALARGADQATLRAAKRFFDDAA 408
Query: 389 AHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LGI + + +S +E + +R + F++AD IR++L + G +LED
Sbjct: 409 GGVLGILGGAAETQGDAELVSGLVELISAQRQEARLRRDFATADAIRERLAALGIVLEDT 468
Query: 446 KNPDNGQRMT 455
+ +R
Sbjct: 469 PDGVRWKRGV 478
>gi|86133639|ref|ZP_01052221.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
gi|85820502|gb|EAQ41649.1| Cysteinyl-tRNA synthetase [Polaribacter sp. MED152]
Length = 492
Score = 357 bits (917), Expect = 2e-96, Method: Composition-based stats.
Identities = 161/492 (32%), Positives = 234/492 (47%), Gaps = 52/492 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++KIYN+L + +F+ I + MYVCGPTVY AH+GN R + FDV+YR L +
Sbjct: 6 ENQLKIYNSLSKSKEDFKPITEGYVGMYVCGPTVYSNAHLGNVRTFMFFDVVYRYLLHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D+I ++AR E + K T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDADEGEDRISKKARLEEIE------PMEVVQKYTVDFHNVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L P+ +P AT HI + I +I+ II G AYE N + FD + NYG S R
Sbjct: 118 ENYNFLPPSIEPTATGHIVEQIEMIKEIIEKGFAYEVNGSVYFDVLEYNKKENYGILSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ + + KKNP DF LWK++ W SPW G PGWH+ECS MS+ Y
Sbjct: 178 KVEDLIHNTRTLDGQSDKKNPQDFALWKKADDRHIMRWPSPWSDGFPGWHLECSVMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQS ++ N W+H L L +KM+KS GNFI
Sbjct: 238 LGESFDIHGGGMDLKFPHHECEIAQSKTCSGVKP-VNYWMHTNMLLLNSQKMAKSTGNFI 296
Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
NE+L +++ A V+R + +YR +DF+ L +E SK +
Sbjct: 297 LPNEILTGNNDILPKAFSASVVRFFNMQANYRSILDFSGDALEASEKGHSKLMEAVAFLD 356
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
I+ +A+ +D NT I L + + + +
Sbjct: 357 KIEAGSTSTFNVENWKKDCYAAMNDDFNTPILISHLFEAVKLINQIKEGKGSLTETDLTL 416
Query: 388 --------SAHILGIEVCKEHLNKN-ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LG+ N + + +E L++ R + K ++ +D IR +L +
Sbjct: 417 FKTTIKAFVFDVLGLIGEDAQDNSDKVKGVVELLIKLRKEARENKDWALSDQIRDELVAL 476
Query: 439 GFILEDYKNPDN 450
G L+D K
Sbjct: 477 GIQLKDGKEGTT 488
>gi|326798885|ref|YP_004316704.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
gi|326549649|gb|ADZ78034.1| cysteinyl-tRNA synthetase [Sphingobacterium sp. 21]
Length = 487
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 158/495 (31%), Positives = 227/495 (45%), Gaps = 51/495 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IYNTL RK F+ I+P + +YVCGPTVY H+GN R + FD++YR L Y
Sbjct: 1 MSSNLVIYNTLSRKKEIFEPINPPMVGLYVCGPTVYSDVHLGNCRTFVSFDLIYRYLLYS 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK ++A+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE------PMEIVQKYTIGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
L P+ +P AT HI + I +++ II +G+AYE N + FD S +Y +
Sbjct: 113 LRLFNTLPPSIEPTATGHISEQIEMVKQIIANGYAYEVNGTVYFDVEKYSKNNDYTILTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
R++++ TR +K DF LW K W SPWG G PGWHIECSAMS+
Sbjct: 173 RQLEDMLNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPSPWGVGFPGWHIECSAMSNK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL HH NEIAQS + A W+H L + G +MSKS GN
Sbjct: 233 YLGHQFDIHGGGMDLAATHHTNEIAQSQACNHTNP-AKYWMHTNMLTVNGARMSKSAGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
EL R + +R ML HYR +DF+ + L ++ +
Sbjct: 292 FLPRELFTGDHPLLTRGYSPMSVRFFMLQAHYRSTLDFSNEALEASDKGYRRLMNAIALL 351
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---- 387
I ++A+ +D N+ I L ++ R +D +A
Sbjct: 352 PKLKASASSEVDFEEIKQRFIAAMNDDFNSPVLIAELFEVVRIINSVYDNKTKIDAKGLA 411
Query: 388 ---------SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ILG++ + N ++ ++ +++ R K ++++D IR L+
Sbjct: 412 QLNTLVNDFVFNILGLKDDQTENNGDLEKLMDFIIKLRQEAKASKDYATSDLIRNSLQEM 471
Query: 439 GFILEDYKNPDNGQR 453
GF L+D K +
Sbjct: 472 GFQLKDSKEGTVWSK 486
>gi|291453078|ref|ZP_06592468.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
gi|291356027|gb|EFE82929.1| cysteinyl-tRNA synthetase 1 [Streptomyces albus J1074]
Length = 486
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 162/482 (33%), Positives = 248/482 (51%), Gaps = 48/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD+L R Y +
Sbjct: 23 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQSAPHIGHIRSGLNFDILRRWFAYRGYD- 81
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT++RN+TDIDDKII+++ ++ I +N + F L CL PT++PR
Sbjct: 82 -VTFIRNVTDIDDKIIKKSAEQ------ERPWWAIGYENERAFNNGYDALGCLPPTYEPR 134
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+P+MI +++ +I GHAYEA+ + FD S P Y S + +DE + + +
Sbjct: 135 ATGHVPEMIEMMRGLIERGHAYEADGNVYFDVRSFPEYLELSNQDLDELRQPSG-EGETG 193
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDL+FPH
Sbjct: 194 KRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLVFPH 253
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 254 HENEIAQAKAYG--DDFATYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHWRP 304
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAVLS 353
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 305 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFMQRVTEKAGETPEPATEVPPAFAE 364
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 365 AMDDDLGVPQALAVIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPYDPHWAGE 424
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ +R K +++AD IR QL+ G ++ED
Sbjct: 425 ADRGEDLHGAVDTLVRLVLDQREAARTRKDWATADAIRDQLQQSGLVIEDSPTGPRWTLG 484
Query: 455 TR 456
R
Sbjct: 485 PR 486
>gi|239995443|ref|ZP_04715967.1| cysteinyl-tRNA synthetase [Alteromonas macleodii ATCC 27126]
Length = 460
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 162/496 (32%), Positives = 245/496 (49%), Gaps = 77/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT R+ +F + + +YVCG TVYD +H+G+AR + FDVL R +R+ +
Sbjct: 1 MLHLYNTRTREKAKFVPLQEGKVGLYVCGITVYDLSHMGHARTYLSFDVLVRYMRHLGLD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + ++ +T++ +D + L P +P
Sbjct: 61 --VKYVRNITDIDDKIIARANENG------ESFEALTARTIAMMHEDFAAINLLEPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ H+ ++I +IQ ++ G+AY+ + +++FD S +YG S++ +D+ K G RV
Sbjct: 113 TVSGHMDEIIAIIQRLMDKGYAYQAKSGDVLFDVSKYEDYGKLSKQDLDQLKAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + P EP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL F
Sbjct: 173 AGKDDPLDFVLWKTTKPGEPAWQSPWGEGRPGWHIECSAMNHKHLGAHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA N+W+H G + + KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEVAQSCCAYDT-PYVNVWMHAGMVQVNDEKMSKSLGNFFTLRDVL-------KEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
+ +R ++ HYR + ++ +T+A+ L + + + LS
Sbjct: 285 DSETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVEVDESTDLSYGGYLKRFE 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKE------ 399
+ +DLN A L +ARE + D L + ILG+
Sbjct: 345 AAMNDDLNVPEAFSVLFDVARELNRQKDNADEAGKLAAVLKGLGAILGMLQSDPDTFLKG 404
Query: 400 -HLNKNISIAIEKLVQERLILL---------------KMKKFSSADYIRKQLESKGFILE 443
N + + IE L+++R K G +LE
Sbjct: 405 GEGNDDEAAEIEALIKQRNDARASKDWAAADAARDALNAK---------------GVVLE 449
Query: 444 DYKNPDNGQRMTRWKQ 459
D G T W++
Sbjct: 450 D------GPSGTTWRK 459
>gi|325920178|ref|ZP_08182138.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
gi|325549358|gb|EGD20252.1| cysteinyl-tRNA synthetase [Xanthomonas gardneri ATCC 19865]
Length = 481
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 196/506 (38%), Positives = 266/506 (52%), Gaps = 73/506 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DP++ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPTSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I +GHAY A ++F +S +YG SRR DE G RV
Sbjct: 113 IEPAATAHIPQIMAMIEQLIANGHAYAAEGHVLFAVASFEHYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGATIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGATFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIARH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
P +R A+L HYR+P+D++ + +A+ L + T
Sbjct: 288 --PPEALRYALLSAHYRQPLDWSDGLIEQAKNTLDRLYGTLRDLAAVETDSGVGPTQPTT 345
Query: 347 IDPAVLSALYNDLNTV-----------SAIQALHKLA----RESTKNHDLLPIFNAS--- 388
I V SAL +DLNT A +ALH LA +S ++ + L +
Sbjct: 346 IPDDVESALDDDLNTPLALAALAKLAKEASRALHDLAPAGGPDSERSGEHLAALRRAKSD 405
Query: 389 ---------------AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
A + I LV+ER K K F+ AD IRK
Sbjct: 406 LLGAGLALGLLQQDPAA-----WFSRGTDAGDDARITTLVEERNAAKKAKDFARADAIRK 460
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
QL +G +LED + RWK+
Sbjct: 461 QLADEGIVLEDT------PQGVRWKR 480
>gi|225010586|ref|ZP_03701057.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
gi|225005415|gb|EEG43366.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
Length = 492
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 159/492 (32%), Positives = 227/492 (46%), Gaps = 52/492 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KIYN+L K F I + MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 NNTLKIYNSLSGKKEIFTPITAGYVGMYVCGPTVYSQVHLGNCRTFMSFDMIFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E + K T F
Sbjct: 66 F--KVRYVRNITDAGHLENDAEEGEDKIAKKARLEQIE------PMEVVQKYTVDFHNIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
T+ L P+ +P AT HI + I +I II G+AY N + FD +YG S R
Sbjct: 118 TQFNLLPPSIEPTATGHIIEQIQIIDEIIAKGYAYHVNGSVYFDVQKFNETNDYGKLSGR 177
Query: 169 KIDEQKMGTRVPEKYHKKN-PADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR +K P DF LWK++ P W S WG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMLANTRSLTAQDEKKSPQDFALWKKAEPQHIMRWHSKWGDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LGK FDIHGGG+DL FPHHE EIAQ+ + + W+H L L G+KMSKS N I
Sbjct: 238 LGKTFDIHGGGMDLKFPHHECEIAQAEATNGVSP-VKYWMHANMLTLNGKKMSKSTDNNI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+ + + A V+R M+ HY +D + + L +E ++ +
Sbjct: 297 LPGEIFSGENNILSKPFTASVLRFFMMQAHYTSILDLSNEALLASEKGHARLMEAFKQLD 356
Query: 346 II-------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
+ + SA+ +D NT I L + +E +
Sbjct: 357 SVVVGNHTDFDLKSWEDKCYSAMNDDFNTPILIAHLFEGVKEINLLKEGNHQISQADKAH 416
Query: 381 LLPIFNAS-AHILGIEVCKE-HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ A +LG++ E N +E L++ R K F+++D IR QL +
Sbjct: 417 FTALLKAFVLDVLGLKEGVEMATNSQTPALVEMLIKLRKEARDNKDFATSDAIRDQLLAL 476
Query: 439 GFILEDYKNPDN 450
G L+D
Sbjct: 477 GIQLKDGAEGTT 488
>gi|163743240|ref|ZP_02150621.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
gi|161383428|gb|EDQ07816.1| cysteinyl-tRNA synthetase [Phaeobacter gallaeciensis 2.10]
Length = 496
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 195/462 (42%), Positives = 268/462 (58%), Gaps = 23/462 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 35 IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 94
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTY RN TD+DDKI A ++ + + + T + ++ D L L P H
Sbjct: 95 HVTYARNFTDVDDKINATALARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 154
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT +IPQMI +I+ +I GHAY ++F S +YG+ S R +D+ G RV
Sbjct: 155 MPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARVE 214
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGW+SPWGRGRPGWHIECSAMS G FDIHGGG DL
Sbjct: 215 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGNDL 274
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA A IW+HN L +EG+KMSKS GNF T+ +LL+ +
Sbjct: 275 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 328
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---N 357
+P VIRL L THYR+P+D+T ++ EAE L +W +T A ++ + +
Sbjct: 329 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRRWRALTTGINPAPTASVAVIDALSD 388
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT A+ LHKLA + + SA +LG+ K + + ++S + L
Sbjct: 389 DLNTAGALAELHKLA-----SAETAADLLTSARLLGLLTDKMGTWSQGEDHDLSHHEKSL 443
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R + ++ K F+ D ++ L + G + K
Sbjct: 444 FDARQVAIETKDFAEVDRLKTALIAAGVEVRMSKTGVELVPG 485
>gi|289770190|ref|ZP_06529568.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
gi|289700389|gb|EFD67818.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
Length = 569
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 162/482 (33%), Positives = 246/482 (51%), Gaps = 48/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y +
Sbjct: 106 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 164
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKII +A ++ N I +N + F L CL PT++PR
Sbjct: 165 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 217
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +M+ +++ +I GHAYEA+ + FD S+P Y S S + +DE + +
Sbjct: 218 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 276
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGG+DLIFPH
Sbjct: 277 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 336
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A W+HN ++ + G KMSKS GN + ++E++ + WP
Sbjct: 337 HENEIAQAKGFGDA--FARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 387
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
V+R + HYR I+++ + L EAE + + PA
Sbjct: 388 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 447
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
A+ +DL A+ +H R+ L A +LG++
Sbjct: 448 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 507
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ +R K +++AD IR +L G ++ED
Sbjct: 508 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIEDSPQGPRWSLG 567
Query: 455 TR 456
+R
Sbjct: 568 SR 569
>gi|86609278|ref|YP_478040.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|109894953|sp|Q2JKL2|SYC_SYNJB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|86557820|gb|ABD02777.1| cysteinyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 525
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 173/546 (31%), Positives = 239/546 (43%), Gaps = 111/546 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSN----------------------IRMYVCGPTVYDFAHIG 42
+ +YNTL R+ FQ + +RMYVCG TVYD H+G
Sbjct: 1 MVVYNTLTRRKEVFQPLAAGGSQSVSVGNSQGSAAPVAEEKPLVRMYVCGVTVYDLCHLG 60
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR +V+D++ R L + V YV+N TD+DDKI++RA + +++ + +
Sbjct: 61 HARTYVVWDMVRRYLEWRGY--RVKYVQNFTDVDDKILKRALERG------ESMQAVAER 112
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN------------ 150
++ +D L PRAT + M LIQ++ L G AY +
Sbjct: 113 FIAEYFRDMDCLNIKRADFYPRATQSLQAMFQLIQSLELKGFAYRVRDPIRHQTDQSSLL 172
Query: 151 --------------EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---HKKNPADFIL 193
+ + P+YG S RK++E + G K++P DF L
Sbjct: 173 QAGHQPETPASVQYSVYYSVRKFPDYGQLSGRKLEEMEAGASGRVGEEGAEKQDPFDFAL 232
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK + P EPG+ SPWG GRPGWHIECSAM LG DIH GG DLIFPHHENE+AQS
Sbjct: 233 WKAAPPSEPGFASPWGWGRPGWHIECSAMVRETLGDHIDIHAGGADLIFPHHENELAQSE 292
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ A W+HNGFLN+ G KMSKS GNF T+ + L + +RL +L
Sbjct: 293 PITG-KPMAKYWMHNGFLNINGEKMSKSLGNFTTLRQALAV-------YHPMALRLFLLQ 344
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTS------------KGIIDPAVLSALYNDLNT 361
THYR PID T + A + A +A+ ND T
Sbjct: 345 THYRSPIDLTEAAMQAASRGWETLQKGIHCAQHFCKEEKGSPDAEAMQAFQAAMDNDFGT 404
Query: 362 VSAIQALHKLARESTKNHDLL-----------------PIFNASAHILGIEVCKEHLNKN 404
A+ +LA+E T+ H+L LG +
Sbjct: 405 PEALAIAFELAKELTREHNLFTHQGQTHLEPQALKQKSAALLEILATLGFCWPSFSEFEG 464
Query: 405 ISIA----------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
A IE+L+ +R K K FS AD IR QL++ G L D K+
Sbjct: 465 SKEAATNGELNFKKIEELIAQRSAARKAKNFSEADRIRDQLKALGITLIDQKDGT----- 519
Query: 455 TRWKQK 460
TRW ++
Sbjct: 520 TRWLRE 525
>gi|38234535|ref|NP_940302.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
gi|61216541|sp|Q6NFC3|SYC_CORDI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|38200798|emb|CAE50502.1| Putative cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
Length = 463
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 144/477 (30%), Positives = 225/477 (47%), Gaps = 44/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R + +F+ I P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLRIFDTGTRSLRDFEPIRPGHASIYLCGATPQTQPHIGHVRSGVAFDILRRWLIAQGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKAAENG------RPWWEWVSTYEREFTWAYNQLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ +Q +I +G AY A + FD ++ + ++ +
Sbjct: 113 PRATGHVTQMVEYMQRLIDNGFAYAAEGSVYFDVAAWTAAEGSDYGSLSGNRVEEMEQGE 172
Query: 183 YH---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+ DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FDIH GGLD
Sbjct: 173 TEITGKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGEFDIHCGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A AN W+HN ++ + G KMSKS GN +++ +L+ +
Sbjct: 233 LQFPHHENEIAQSHAAGDG--FANYWMHNHWVTMSGEKMSKSLGNVLSVPNILDKVR--- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPAVLSA 354
+R + HYR ++++ L EA + G A
Sbjct: 288 ----PVELRYYLGSAHYRSMLEYSEGALLEAAAGYRRIEAFLTKVADVEAGQWTTEFEEA 343
Query: 355 LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHL---- 401
+ +DL A+ +H R K H++ A A +LG++ E
Sbjct: 344 MNDDLAVPRALAEIHTQVRHGNSALAAGDVDKAHEIAASVRAMAAVLGVDPLDEKWLDSA 403
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
N + + ++ +Q R K +++AD +R +L + G + D +
Sbjct: 404 ASDSSTNAALDVLVQAELQRRTEARAAKDWATADEVRDRLHAAGITVTDTPDGPTWA 460
>gi|30316165|sp|Q8FMI8|SYC_COREF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 459
Score = 357 bits (916), Expect = 2e-96, Method: Composition-based stats.
Identities = 146/474 (30%), Positives = 226/474 (47%), Gaps = 41/474 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R + EF + P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKAAEHG------RPWWEWVSTYEREFTWAYNTLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ +Q +I +G AYE N + FD ++ + ++ +
Sbjct: 113 PRATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGE 172
Query: 183 YHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG FDIH GGLD
Sbjct: 173 TDNFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A A W+HN ++ + G KMSKS GN +++ +LE +
Sbjct: 233 LQFPHHENEIAQAHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR--- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
+R + HYR ++++ LTEA + G ++ +A
Sbjct: 288 ----PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEVGTWTAGFEAA 343
Query: 355 LYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLNKNI 405
+ DL A+ +H RE K +L A +LG + + +
Sbjct: 344 MDEDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQTDD 403
Query: 406 SIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
S A E L ++ R K ++ AD +R +L + G + D + + +
Sbjct: 404 SAAHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVDTADGVSWK 457
>gi|68171834|ref|ZP_00545169.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
Sapulpa]
gi|67998744|gb|EAM85461.1| Cysteinyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
Sapulpa]
Length = 459
Score = 357 bits (916), Expect = 3e-96, Method: Composition-based stats.
Identities = 196/476 (41%), Positives = 267/476 (56%), Gaps = 41/476 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL F N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+ Y V
Sbjct: 3 IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLY--PKV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII A+ N +I +T+ + F +D L CL PT++PRAT
Sbjct: 61 TYVRNITDIDDKIINVAQ------NTNQSIYDVTAIYIKAFHEDMKMLNCLEPTYEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
++I +I LIQ ++ GHAY N + F+ S +YG S R I + G+R+ + KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174
Query: 187 NPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+P DF+LWK +T ++ W SPWG GRPGWHIECSAMS YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + A W+HNGFL + KMSKS GN +T+ +LL +
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNS------GI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+IR +L THYR+P+D+ Q + A+ L++ +S + V+
Sbjct: 289 TGELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEV---CKEHLNKN 404
L +D+NT AI LH++ E K D++ +A+ LGI +
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGILQHSWQDWFKIDD 408
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I +L+ ER F AD IR+ L ++G +L D K+ T W +K
Sbjct: 409 NNQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLSDNKDGT-----THWYKK 459
>gi|317504596|ref|ZP_07962566.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
gi|315664290|gb|EFV03987.1| cysteine--tRNA ligase [Prevotella salivae DSM 15606]
Length = 496
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 156/502 (31%), Positives = 234/502 (46%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++ + IYNTL R F+ N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQNLIIYNTLTRHKELFKPQHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHAA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD N S
Sbjct: 113 MEALNVLPPSIEPHATGHIIEQEELVKEILNNGYAYESNGSIYFDVVKYNNDHRYGILSG 172
Query: 168 RKIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + +R + KK+ DF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLTDLINNSRELQGVSEKKHQVDFALWKKAQPEHIMRWPSPWSVGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGSHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + +++ IR +L HYR +DF+ + L A+ +
Sbjct: 292 ITLEQFFTGNHASLTQAYSPMTIRFFILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDL 351
Query: 345 GIID-----------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+ A+ +DL T I L + D ++
Sbjct: 352 ERVPVSDHCDAETQQFVKNFRQRCYDAMNDDLQTPLVISYLFEACHLINTLLDHKTTIDS 411
Query: 388 -------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ ++LG++ K N+ A ++ ++ R K ++++D
Sbjct: 412 DSLHELSEAMKLFAFNLLGLKNEKGDNNEAREEAYGKVVDMVLDLRAKAKADKDWATSDK 471
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR L GF ++D K+ +
Sbjct: 472 IRDALSEAGFEVKDTKDGVTWK 493
>gi|29348760|ref|NP_812263.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|253568897|ref|ZP_04846307.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|298387124|ref|ZP_06996678.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
gi|61216345|sp|Q8A2F4|SYC_BACTN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|29340666|gb|AAO78457.1| cysteinyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|251840916|gb|EES68997.1| cysteinyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|298260274|gb|EFI03144.1| cysteine--tRNA ligase [Bacteroides sp. 1_1_14]
Length = 493
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 168/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + +
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIEGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 DKITPAATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNINAGNATISAED 411
Query: 378 NHDLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F+ I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFCFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEVKDTKDGFEW 489
>gi|190575186|ref|YP_001973031.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia K279a]
gi|190013108|emb|CAQ46740.1| putative cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia
K279a]
Length = 458
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 180/481 (37%), Positives = 259/481 (53%), Gaps = 48/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++N L R++ F +DP+ +YVCGPTVY++ HIGNAR +VF VL LLR +G
Sbjct: 1 MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
Y RNITD+DDKI AR++ IS IT + + +D L + P +
Sbjct: 61 GL--RYARNITDVDDKINTAAREQGV------PISTITDRFAAAYREDMAALGVVPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T H+PQ+I +I+ +I +GHAY A ++F +S YG SRR +E G RV
Sbjct: 113 PEVTAHMPQIITMIEQLIANGHAYAAEGHVLFAVASFDGYGKLSRRDPEEMLAGARVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A W+HNG LN G KMSKS GN +++L+ R
Sbjct: 233 PHHENEIAQSECAHGGRIFARYWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +RLA+L HYR+P+D++ + ++ L + T I+ + + + L
Sbjct: 286 PPEALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPASVEATLD 345
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------------AHILGIEVCKE 399
+DLNT A+ + ++A ++ + D A G
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFG----TA 401
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ I+ L+ ER K + F+ +D IR QL ++G +LED + RW +
Sbjct: 402 AGDGGDDARIQGLIDERAAAKKARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSR 455
Query: 460 K 460
K
Sbjct: 456 K 456
>gi|258512691|ref|YP_003186125.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257479417|gb|ACV59736.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 474
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 179/498 (35%), Positives = 247/498 (49%), Gaps = 65/498 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YN+L K Q ++P +R Y CGPTVY F H+GNAR +VFD + R L Y
Sbjct: 1 MGILLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V+N TDIDD+II+RA++ S + +N + + +D +L T
Sbjct: 61 E--VRFVQNFTDIDDRIIQRAQELGIS------PRELAEENIRYYFEDAGKLFIRPATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + ++I IQ++I GHAYE N + FDTSS P YG S + ++ + G R+ +
Sbjct: 113 PRVTECVDEIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQ 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P E W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIF
Sbjct: 173 DEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG LN+ G KMSKS GNFI +LLE +
Sbjct: 233 PHHENEIAQSEAHSG-KTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERR------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+R +L HYR P+++T + L +AE LS+ +
Sbjct: 285 DPRAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRAD 344
Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------L 382
I A + A+ +D NT + A+ R +
Sbjct: 345 EVPSTRGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRVVNTRLEEGGVTLGDLRLYR 404
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+F +LGI +E ++ +L+ ER K + F+ AD IR QL +G +L
Sbjct: 405 DLFVELLGVLGIPKKEEERLEDEIE---RLIAERAEARKRRDFARADEIRDQLRHRGIVL 461
Query: 443 EDYKNPDNGQRMTRWKQK 460
ED TRW +
Sbjct: 462 EDT------PYGTRWSYE 473
>gi|84686990|ref|ZP_01014873.1| cysteinyl-tRNA synthetase [Maritimibacter alkaliphilus HTCC2654]
gi|84664964|gb|EAQ11445.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2654]
Length = 457
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 212/456 (46%), Positives = 273/456 (59%), Gaps = 17/456 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+IK +NT R F IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR YG
Sbjct: 3 EIKFHNTATRSKEVFTPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGP 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN TD+DDKIIERA ++ I ITS+ TQ ++ D L L PT P
Sbjct: 63 NHVTYVRNFTDVDDKIIERANRDGKE------IDQITSETTQWYLDDMAALGALEPTAMP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI M+ +I+ +I GHAY A ++F S +YG S R +D+ G RV
Sbjct: 117 RATQHIDDMVTMIEGLIDSGHAYAAEGHVLFAVDSYDDYGKLSGRSVDDMIAGARVEVAP 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K+NP DF+LWK + EPGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+FP
Sbjct: 177 YKRNPMDFVLWKPARDGEPGWDSPWGRGRPGWHIECSAMSYGLLGESFDIHGGGNDLMFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS CA AN+W+HN L +EG+KMSKS GNF T+++LLE + P
Sbjct: 237 HHENEIAQSKCAHAGAGFANVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------QGVP 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNT 361
VIR L THYR+P+D+T ++ EAE L KW + S G + A++ A+ NDLNT
Sbjct: 291 GEVIRFVFLGTHYRKPMDWTEKKREEAEATLGKWHRMRGSNKPGAVPKAIVDAVANDLNT 350
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILG---IEVCKEHLNKNISIAIEKLVQERLI 418
AI LHKLA L + + +++ +E + +S KL Q R+
Sbjct: 351 PEAISVLHKLANIGDIEGLLGGLDFLGLKTIDTEMLDLIREGEQERLSELEAKLTQLRIG 410
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ K +S D ++ L + G + K
Sbjct: 411 AMNTKDYSQVDAMKSALIAAGVEVRMSKAGIELVPG 446
>gi|304383413|ref|ZP_07365879.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
gi|304335581|gb|EFM01845.1| cysteine--tRNA ligase [Prevotella marshii DSM 16973]
Length = 499
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 168/502 (33%), Positives = 243/502 (48%), Gaps = 59/502 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++ +YNTL RK EF + N+ MYVCGPTVY H+G+ARP I FDVL+R LR+
Sbjct: 4 MQQRLFVYNTLTRKKEEFVPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVLFRYLRHI 63
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 64 GY--KVRYVRNITDVGHLEHDADDGDDKITKKARLEQLE------PMEIAQLYTNRYHDA 115
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P AT HI + L++ I+ +G+AYE++ I FD S
Sbjct: 116 MRALNVLPPSIEPHATGHIIEQEELVKQIMSNGYAYESHGSIYFDIEKYNKDHRYGILSG 175
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ +R + +K+ DF LWKR+ P W SPWG G PGWH EC+AM
Sbjct: 176 RNLDDVINNSRELDGVGEKHNQVDFALWKRAHPEHIMRWPSPWGDGFPGWHCECTAMGRK 235
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DLIFPHHE EIAQ+ + ++ + W+HN + ++G+KM KS GNF
Sbjct: 236 YLGNHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVHYWMHNNMITVDGKKMGKSLGNF 294
Query: 286 ITINE-LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ + + T +++ IR +L HYR +DF+ L +E L +
Sbjct: 295 ITLEQFFIGTHPLLKQAFSPMTIRFFILSAHYRGTVDFSNDALAASEKGLERLMNGLDDL 354
Query: 345 GIIDP-----------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
I P AL +DL T + I L + R D NA
Sbjct: 355 DRIQPAPSTDETTAQTVATLRKRCYDALNDDLQTPTVISHLFEACRIINTVLDHKGSINA 414
Query: 388 SA-------------HILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ K N A ++ ++ R K +S++D
Sbjct: 415 ADLQELKDTMHLFAFDLLGLKSEKNANNDAREAAYGKVVDMVLDLRAKAKADKDWSTSDR 474
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR +L GF ++D K+ +
Sbjct: 475 IRDELAKDGFEVKDTKDGVTWK 496
>gi|254510796|ref|ZP_05122863.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
gi|221534507|gb|EEE37495.1| cysteinyl-tRNA synthetase [Rhodobacteraceae bacterium KLH11]
Length = 473
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 204/463 (44%), Positives = 266/463 (57%), Gaps = 23/463 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R F IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 12 IKLHNTRTRTKESFVPIDPDNVRMYVCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGPD 71
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V Y RN TD+DDKI A +Q + + + + ++ D L L P
Sbjct: 72 HVIYARNFTDVDDKINATALARKQAGADGTLEQLVQERSDETIGWYLHDMGALGALEPNA 131
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVP 180
PRAT +I QMI +I+++I GHAY A ++F S YG S R +D+ G RV
Sbjct: 132 MPRATQYIAQMIAMIEDLIAKGHAYAAEGHVLFAVDSWREGYGKLSGRSVDDMIAGARVE 191
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+KKNP DF+LWK S+ PGW+SPWGRGRPGWHIECSAM+ LG+ FDIHGGG DL
Sbjct: 192 VAPYKKNPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMAYELLGESFDIHGGGNDL 251
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA + A +W+HN L +EG+KMSKS GNF T+++LLE +
Sbjct: 252 MFPHHENEIAQSCCAHPEGEFARVWLHNEMLQVEGKKMSKSLGNFFTVHDLLE------Q 305
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYN 357
P VIR L THYR+P+D+T ++ +AE L KW PAV+ AL +
Sbjct: 306 GIPGEVIRFVFLQTHYRKPMDWTEKKARDAEATLRKWRALTAGIEPAASAAPAVIVALGD 365
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT AI LH+LA E ASA I+G+ E ++S E+L
Sbjct: 366 DLNTAGAIAELHRLAAEGDAAG-----LLASARIIGLLSDDMGAWVEAGAVDLSSYAERL 420
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
R+ ++ K F+ D ++ + G + K T
Sbjct: 421 AHARVAAMQSKDFAEVDRLKAAYIAAGLEVRMGKEGVELVPGT 463
>gi|298372255|ref|ZP_06982245.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275159|gb|EFI16710.1| cysteine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
Length = 488
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 163/495 (32%), Positives = 244/495 (49%), Gaps = 53/495 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ I+NTL R+ F+ ++ + +YVCGPTVY AH+G+ARP I FD+L R LR+
Sbjct: 1 MQHKMYIHNTLSRRKELFEPLNEPFVGLYVCGPTVYGDAHLGHARPAITFDILVRWLRHN 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + T ++
Sbjct: 61 GY--RVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVVQHFTIRYHDA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +PRA+ HI + + +Q I+ +G+AYE+ + FD S
Sbjct: 113 MRALNVLPPSIEPRASGHIIEQMEYVQRILDNGYAYESEGSVYFDVERYNKDHRYGILSG 172
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I++ + + K+ DF LWK+++P W S W G PGWH+ECSAM
Sbjct: 173 RNIEDIIENTRELDGQSDKRRSVDFALWKKASPEHIMRWHSKWSDGFPGWHLECSAMGQK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS ++ + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEKFDIHGGGMDLIFPHHECEIAQSVASNG-HQAVRYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR DF+ + L+ ++ LS+ +
Sbjct: 292 ITLDEFFTGSHKLISQAYSPMTIRFFILQAHYRSTADFSDEALSASQKGLSRLFEAYERL 351
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
D A+ +DLNT I L A+ HD
Sbjct: 352 QRLSTGTTTTVEMKDWDSLCEEAMNDDLNTPIVIAHLFDAAKVINTVHDGKGSLSQNDID 411
Query: 381 -LLPIF-NASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
L +F + ILG+ E ++ AI+ ++ RL + K ++ +D IR +L
Sbjct: 412 RLKAVFSTYLSDILGLKTEQGDSKYMESYRRAIDLILNLRLEAKQNKNWALSDKIRDELA 471
Query: 437 SKGFILEDYKNPDNG 451
S GF+++D K
Sbjct: 472 SYGFVVKDTKEGFEW 486
>gi|88658290|ref|YP_507566.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
gi|109894900|sp|Q2GG67|SYC_EHRCR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|88599747|gb|ABD45216.1| cysteinyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
Length = 459
Score = 357 bits (915), Expect = 3e-96, Method: Composition-based stats.
Identities = 196/476 (41%), Positives = 267/476 (56%), Gaps = 41/476 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL F N+R+YVCGPTVYDFAHIGNAR ++++DVL+RLL+ Y V
Sbjct: 3 IYNTLTGIKEPFVPFSIDNVRVYVCGPTVYDFAHIGNARSVVIYDVLFRLLKLLY--PKV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII A+ N +I +T+ + F +D L CL PT++PRAT
Sbjct: 61 TYVRNITDIDDKIINVAQ------NTNQSIYDVTAIYIKAFHEDMRMLNCLEPTYEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
++I +I LIQ ++ GHAY N + F+ S +YG S R I + G+R+ + KK
Sbjct: 115 DNIDVIISLIQKLVDSGHAYVYNGSVFFNIESYSSYGQLSGRNISQLIYGSRIDIEVGKK 174
Query: 187 NPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+P DF+LWK +T ++ W SPWG GRPGWHIECSAMS YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEIDNQLMSCWSSPWGLGRPGWHIECSAMSYRYLKENFDIHGGGADLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + A W+HNGFL + KMSKS GN +T+ +LL +
Sbjct: 235 PHHENEIAQSCCAFPDSRYAKYWVHNGFLTVNDEKMSKSLGNVLTVRQLLNS------GI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+IR +L THYR+P+D+ Q + A+ L++ +S + V+
Sbjct: 289 TGELIRYVLLSTHYRKPLDWNSQMVASAQESLNRMYTALSSTNVDLSLDDSVELSSHVID 348
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGIEV---CKEHLNKN 404
L +D+NT AI LH++ E K D++ +A+ LGI +
Sbjct: 349 CLKDDINTPKAISMLHEMVTEINKTADMIEKISLTKTLIKTANFLGILQHSWQDWFKIDD 408
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I +L+ ER F AD IR+ L ++G +L D K+ T W +K
Sbjct: 409 NNQEISQLIDERKKARANNDFKRADDIRQLLLNRGIVLSDNKDGT-----THWYKK 459
>gi|224536743|ref|ZP_03677282.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
DSM 14838]
gi|224521659|gb|EEF90764.1| hypothetical protein BACCELL_01619 [Bacteroides cellulosilyticus
DSM 14838]
Length = 491
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 165/497 (33%), Positives = 245/497 (49%), Gaps = 54/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FD+L+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDLLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEQLE------PMEVAQYYINRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L++ I+ +G+AY + + FD +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVKEILKNGYAYVSEGSVYFDVEKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K NPADF LWK + P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQAEKHNPADFALWKCAQPEHIMRWPSPWSDGFPGWHAECTAMGKK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G+KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQGND-MVHYWMHNNMITINGQKMGKSYGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I ++E K +++ IR +L HYR +DF+ + L AE L++
Sbjct: 292 INLDEFFNGTHKLLTQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKGLTRMMDAVNGL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTK------------NH 379
I P A+ +DLNT I L AR
Sbjct: 352 EKITPSATSSVDVKAVREKCYEAMNDDLNTPIVIAHLFDGARMINNIIAGNDTITADDLK 411
Query: 380 DLLPIFNASA-HILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQL 435
+L F+ ILG++ + ++ L++ER+ K ++++D IR +L
Sbjct: 412 ELKETFHLFCFDILGLKEENNSNEEREVAFGKVVDMLLEERMKAKANKDWATSDKIRNEL 471
Query: 436 ESKGFILEDYKNPDNGQ 452
+ GF ++D K+ +
Sbjct: 472 TALGFEIKDGKDGCEWK 488
>gi|229815837|ref|ZP_04446161.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
13280]
gi|229808532|gb|EEP44310.1| hypothetical protein COLINT_02890 [Collinsella intestinalis DSM
13280]
Length = 532
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 178/503 (35%), Positives = 250/503 (49%), Gaps = 70/503 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KIYN+ + +F+ I+ +RMYVCGPTVYD HIGNAR I FDV+ R L
Sbjct: 42 EIPMKIYNSATHQKEDFRPIEEGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASG 101
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT+ +N+TD+DDKII RA ++ + + ++ + +F+ L P
Sbjct: 102 YE--VTFAQNLTDVDDKIINRANEQGRTAE------EVATEFSDKFIGVMRAANVLDPDV 153
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT I MI +I+ +I GHAY N ++ F S P+YG S R ID+ +G R+
Sbjct: 154 RPRATKEIGAMIGMIKTLIEGGHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIE 213
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K++P DF LWK + P EP W+SPWG GRPGWH EC+AM YLG DIHGGG DL
Sbjct: 214 ENEDKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDL 273
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE AQ+ CA E AN W+H G L ++G KMSKS GNF T+ E+LE
Sbjct: 274 AFPHHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLE------- 325
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------- 350
A +RL ML THYR P+DF+ +RL AE L++ T +
Sbjct: 326 KHSAAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHAEGEPNAELA 385
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL-------------LPI 384
+ + +D NT A+ A +L E+ K + +
Sbjct: 386 DALTAAMEKAAADYEACMDDDFNTAGAVAAYFQLVTEANKYLEQAAGAVDEGAARVCAAV 445
Query: 385 FNASAHILGIEV-----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ + LG+++ ++ A E ++ R K + +
Sbjct: 446 ISGALAQLGVKLPVIEEPLPAELAGVAAELVGFEGDDVDAAAEAILSARAEARAAKDWGT 505
Query: 428 ADYIRKQLESKGFILEDYKNPDN 450
AD IR +L+ G +ED
Sbjct: 506 ADAIRDRLKELGLAIEDTAAGSR 528
>gi|297200591|ref|ZP_06917988.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
gi|197709716|gb|EDY53750.1| cysteinyl-tRNA synthetase [Streptomyces sviceus ATCC 29083]
Length = 465
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 160/483 (33%), Positives = 242/483 (50%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFAPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+VRN+TDIDDKII +A ++ I +N + F T L CL P+++
Sbjct: 61 E--VTFVRNVTDIDDKIIAKAAEQK------RPWWAIGYENERAFNDGYTALGCLPPSYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +M+ ++Q +I GHAYE++ + FD S P Y SR+++ + + +
Sbjct: 113 PRATGHVTEMVEMMQGLIERGHAYESDGNVYFDVRSFPGYLELSRQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSAKPGEPTWSTPWGPGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DDFAQYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVL 352
V+R + HYR I+++ L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEDALREAESAFARIEGFVQRVVEKAGPVEPSAEVPPAFA 342
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
A+ +DL A+ +H R+ L A +LG++ EH
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAG 402
Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++ +R K +++AD IR QL G +ED
Sbjct: 403 ETDRGDDLHGVVDSLVRLVLDQREAARARKDWATADAIRDQLGQSGLTIEDGPQGPRWTL 462
Query: 454 MTR 456
R
Sbjct: 463 GPR 465
>gi|329999154|ref|ZP_08303351.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
gi|328538407|gb|EGF64532.1| cysteine--tRNA ligase [Klebsiella sp. MS 92-3]
Length = 444
Score = 356 bits (914), Expect = 3e-96, Method: Composition-based stats.
Identities = 167/443 (37%), Positives = 235/443 (53%), Gaps = 42/443 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVSFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + KD L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHKDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY N +++FD + PNYG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEITEQLIAKGHAYVADNGDVMFDVPTDPNYGLLSRQDLDQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A IR ++ HYR ++++ + L +A L + + +
Sbjct: 285 DAETIRYFLMSGHYRSQLNYSEENLKQARSALERLYTALRGTDKSVDAAGGEAFEARFIE 344
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHL---- 401
A+ +D NT A L +ARE + + A +LG+ +
Sbjct: 345 AMDDDFNTPEAYSVLFDMAREVNRLKTEDAAAANAMAAHLRKLAAVLGLLEQEPEAFLQS 404
Query: 402 ----NKNISIAIEKLVQERLILL 420
+ IE L+Q+RL
Sbjct: 405 GAQVDDAEVAEIESLIQQRLDAR 427
>gi|197334356|ref|YP_002156417.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|197315846|gb|ACH65293.1| cysteinyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 460
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 166/499 (33%), Positives = 246/499 (49%), Gaps = 82/499 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LR+ +
Sbjct: 1 MKIYNSLTRQKEEFKPITEGKVGMYVCGVTIYDLCHIGHGRTFVSFDVISRYLRFLGYDL 60
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
T+VRNITDIDDKII+RA + + +T + D L P +PR
Sbjct: 61 --TFVRNITDIDDKIIKRAAENG------ETCDALTERLIADMHADFDALNMKRPDVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +I +++ L++ +I G AY +N +++F+ YG SR+ +++ + G+RV +
Sbjct: 113 ATEYIKEIVALVERLIERGFAYVASNGDVMFEVKKYDEYGRLSRQDLEQLQAGSRVTLEE 172
Query: 184 H--KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL+
Sbjct: 173 ASVKRSGMDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGDHFDIHGGGSDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSCCA N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 233 FPHHENEIAQSCCAHDT-PYVNTWMHSGMVMVDREKMSKSLGNFFTIRDVLA-------H 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
+ + +R ++ HYR ++++ + L +A L + +
Sbjct: 285 YDSETVRYFLMSGHYRSQLNYSEENLNQARASLERLYTSLRGLDLSVTPAGGEEFVGRFS 344
Query: 353 SALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL--- 401
+A+ +D NT A L ++ARE + L + A +LG+ +
Sbjct: 345 TAMNDDFNTPEAYSVLFEMAREVNRLKTENLDTASKLGALMRELADVLGLLSQEPEAFLQ 404
Query: 402 ---NKNISIAIEKLVQERL-----------------ILLKMKKFSSADYIRKQLESKGFI 441
+ + IE L++ R I + +
Sbjct: 405 GGSSNDDVAEIEALIKARNDARAAKDWAAADAARDAI-----------------AALNIV 447
Query: 442 LEDYKNPDNGQRMTRWKQK 460
LED G T W++K
Sbjct: 448 LED------GPEGTTWRRK 460
>gi|56416697|ref|YP_153771.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
gi|61216132|sp|Q5PB14|SYC_ANAMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56387929|gb|AAV86516.1| cysteinyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
Length = 466
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 191/484 (39%), Positives = 271/484 (55%), Gaps = 47/484 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL F + + +YVCGPTVYD AHIGNAR ++V+DVL+RLL+ Y
Sbjct: 1 MRLHDTLHAAKRVFSPKNSERVGVYVCGPTVYDLAHIGNARSVVVYDVLFRLLKALY--P 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRNITD+DDKII + N +I+ +T+ T+ F +D L CL+PT +PR
Sbjct: 59 EVIYVRNITDVDDKIINA------TESENKSIAELTAHYTKLFHEDIEALNCLSPTFEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M+++I +I GHAY + F S +YG+ S RK+ + G+RV
Sbjct: 113 ATEEIETMLHIIGRLIQAGHAYVRGGTVYFSVESYKHYGALSGRKLGDMISGSRVEVVAE 172
Query: 185 KKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K +P DF+LWK +T ++ W SPWG GRPGWH+ECSAMS YLG FDIHGGG DL
Sbjct: 173 KLHPGDFVLWKPATDLDMKLGACWPSPWGVGRPGWHVECSAMSYRYLGDSFDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
+FPHHENEI+QSCCA + A W+HNGFL + G KMSKS GN IT+ LL
Sbjct: 233 MFPHHENEISQSCCAFPGSEYARYWVHNGFLTVNGGEKMSKSLGNVITVRGLLS------ 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------ID 348
VIR L THYR+P+D+ + + +A+ L+K ++ +
Sbjct: 287 NGVDGEVIRYVFLSTHYRKPLDWGDKAVLDAKEALNKIYRSCEGFSAQLLSTGLEDVGVH 346
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLN 402
AV+++L +D+NT +AI ALH+L +E K ++ L + N SA ++G+
Sbjct: 347 DAVMASLRDDMNTPAAIAALHELVKEINKTNNAGEKLRLARVLNKSAMLMGMFRNFPERK 406
Query: 403 KN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
I +L+++R+ K F AD IR+ L + G + D K+ TR
Sbjct: 407 LLDMRGLVDEGEINRLIEKRVEAKKCGDFKLADEIRESLSNMGIGISDGKDGS-----TR 461
Query: 457 WKQK 460
W +K
Sbjct: 462 WHRK 465
>gi|86131788|ref|ZP_01050385.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
gi|85817610|gb|EAQ38784.1| cysteine-tRNA ligase [Dokdonia donghaensis MED134]
Length = 494
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 156/494 (31%), Positives = 230/494 (46%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ +YN+L K F + + MYVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 DQELTVYNSLSGKKEIFTPLLEGYVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYLKHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E + K T F
Sbjct: 66 Y--KVRYVRNITDAGHLTDDADQGEDKIAKKARLEQIE------PMEVVQKYTLDFHDIL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
+ L P+ +P AT HI + I +I+ II +G+AYE N + FD S R
Sbjct: 118 NKFNFLPPSIEPTATGHIIEQIEIIKKIIDNGYAYEKNGSVYFDVIKFNEDHEYGKLSGR 177
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ TR + NP DF LWK++ P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDMITNTRALSAQDEKNNPQDFALWKKAEPEHIMRWPSPWGDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ+ A E W+H L L G+KM+KS GN I
Sbjct: 238 LGEQFDIHGGGMDLKFPHHECEIAQNEAAIGTEP-VKYWLHANMLTLNGQKMAKSTGNSI 296
Query: 287 TINELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+ + + V R +L + YR +DF+ L +E ++ +
Sbjct: 297 NPGEIFTGDSPHLTKGFAPSVARFFILQSSYRSIMDFSNDALLASEKGFNRLMEALKIAK 356
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA--- 389
+D + +A+ +D NT I L ++ D AS
Sbjct: 357 NLDTSKESSFNVNDWKASCYAAMNDDFNTPILIAHLFDAVKQIHLIKDGKATITASDLKL 416
Query: 390 ----------HILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+E + + +S +E L++ R + K F+ +D IR +L
Sbjct: 417 LLETINAFVFDVLGLEDNNAFAKADDSKLSGTVELLIKLRKEARENKDFALSDKIRDELI 476
Query: 437 SKGFILEDYKNPDN 450
G L+D +
Sbjct: 477 ELGIQLKDGREGTT 490
>gi|19553839|ref|NP_601841.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|62391480|ref|YP_226882.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|24418686|sp|Q8NMD7|SYC_CORGL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21325413|dbj|BAC00035.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|41326821|emb|CAF21303.1| CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC 13032]
Length = 460
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 143/475 (30%), Positives = 227/475 (47%), Gaps = 42/475 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R + +F+ + P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKASENG------RPWWEWVSTYEREFTWTYNTLGVLPPSTE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QMI +Q +I +G AY + + FD ++ + ++ +
Sbjct: 113 PRATGHVTQMIKYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE 172
Query: 183 YHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GGLD
Sbjct: 173 PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A +K AN W+HN ++ + G KMSKS GN + + E+L
Sbjct: 233 LQFPHHENEIAQAHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEML------- 283
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
+ +R + HYR ++++ L+EA + + G ++ P A
Sbjct: 284 KQVRPVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFEVA 343
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKE------ 399
+ D+ A+ +H RE D L A +LG + +
Sbjct: 344 MDEDIAVPKALAEIHNAVREGNAALDKGDREAAEKLASSVRAMTGVLGFDPVEWGSDAGA 403
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+K + + I ++ R K ++ AD +R +L G + D + +
Sbjct: 404 DGKADKALDVLISSELERRATARAEKNWAVADEVRDRLADAGIEVVDTADGATWK 458
>gi|254166931|ref|ZP_04873785.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289596106|ref|YP_003482802.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197624541|gb|EDY37102.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|289533893|gb|ADD08240.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 455
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 178/469 (37%), Positives = 243/469 (51%), Gaps = 39/469 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY+TL + EF + + +YVCGPT YD+AHIG+ARP I+FD+ R L Y +
Sbjct: 1 MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDIFRRFLEYMGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + NITD+DDKII +A + + + ++++KD L P+
Sbjct: 60 -VILISNITDVDDKIINKANE------LGKDPIEMAHYYAREYLKDMDALRVRRANIIPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI ++I LI+ ++ G+AYE+ ++ F +YG S RKI++ G RV
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMLAGARVEVNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G + E KMSKS GN I + L + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
V+RL L +HYR+P DF+ + + EA LL K T +
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEEPSEEVIEEIDSV 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPI---FNASAHILGIEVCKEHLN 402
+++AL +D NT A++ + K D L I I ++
Sbjct: 345 RKKIIAALEDDFNTREAMKEYLSFINFARELKGGDALAALNFLKEMDEIFDILPRGDNEG 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K S IE L+ R K K + ADYIR +LE G +ED K
Sbjct: 405 KE-SELIELLLNVRNEERKRKNYEIADYIRDELEKIGIKIEDTKEGTKW 452
>gi|237720477|ref|ZP_04550958.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|229450228|gb|EEO56019.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_2_4]
Length = 493
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 168/498 (33%), Positives = 250/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIFNAS-AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F+ I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 ALTALGFEIKDTKDGFEW 489
>gi|58699028|ref|ZP_00373873.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534456|gb|EAL58610.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 468
Score = 356 bits (914), Expect = 4e-96, Method: Composition-based stats.
Identities = 194/474 (40%), Positives = 272/474 (57%), Gaps = 41/474 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +K F ID +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG
Sbjct: 14 RLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYG--K 71
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I IT+ + F D + C PT++P+A
Sbjct: 72 VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPKA 125
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T ++ +I LI++++ GHAYE++ + F+ S YG+ S +K DE G+RV +K
Sbjct: 126 TENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENK 185
Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+P DF+LWK + ++ W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL
Sbjct: 186 KHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQ 245
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNGFL + KMSKS N + + +LL++
Sbjct: 246 FPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDS------G 299
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
VIR A+L THYR+P+D+T +++A+ L+K+ + S I +
Sbjct: 300 IKGEVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFI 359
Query: 353 SALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE---VCKEHLNK 403
AL NDLN A+ LH++A + K L F SA +G+ +
Sbjct: 360 DALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTAG 419
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE+L+ R + K +++AD IR QL+ G + D ++ T W
Sbjct: 420 VSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTISDNEDGT-----TTW 468
>gi|194335476|ref|YP_002017270.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
gi|194307953|gb|ACF42653.1| cysteinyl-tRNA synthetase [Pelodictyon phaeoclathratiforme BU-1]
Length = 484
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 166/496 (33%), Positives = 234/496 (47%), Gaps = 61/496 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R +F+ + P + MYVCGPTVY AH+G+A+ + FDV+ R LR+
Sbjct: 1 MSLFIYNSLGRTKEKFEPLHPPIVTMYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRHSGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ +DKI ++A E I+ T+ F +D
Sbjct: 61 --RVKYVQNITDVGHLTDDADEGEDKISKQALLEKTD------PMEISQFYTRSFYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L L P P AT HIP+ I LI+ +I GHAYE + + F S P YG S R E
Sbjct: 113 KLEVLRPNIAPAATAHIPEQIELIERLIDAGHAYEVHGNVYFSVESFPGYGKLSGRTDQE 172
Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G RV + K++P+DF LWK++ W SPW G PGWH+ECSAMS YLG+
Sbjct: 173 AVQSGIRVGVRSEKQHPSDFALWKKAEEGHLMKWNSPWSIGYPGWHLECSAMSMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHH+ EIAQS + W+HN + + G KM KS NFI + +
Sbjct: 233 IDIHGGGMENKFPHHDCEIAQSESVTG-KPYVRFWMHNNMVTVNGIKMGKSLKNFINLKD 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------ 344
L S+ VIR +L +HYR P+DF+ + ++ L K +T
Sbjct: 292 LF-------LSFDPMVIRFFILQSHYRSPLDFSDAAIRASQTGLEKLRETQRRLREQTPG 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
A+ +D NT AI L L++ D F
Sbjct: 345 SGDFDTAPFIQRFTEAMDDDFNTPIAISVLFDLSKSINAALDRTESISELPQQEAAAFLD 404
Query: 388 SA--HILGIEV--------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A IL I +E K + ++ L+ R K K F+ +D IR QL
Sbjct: 405 LAGREILCILQHDNQSGSRNEELNGKRLDGVMDILLDLRAEARKSKDFALSDKIRDQLLV 464
Query: 438 KGFILEDYKNPDNGQR 453
G ++D K + +
Sbjct: 465 AGIEIKDTKEGASWSK 480
>gi|160883992|ref|ZP_02064995.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
gi|156110722|gb|EDO12467.1| hypothetical protein BACOVA_01966 [Bacteroides ovatus ATCC 8483]
Length = 493
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 169/498 (33%), Positives = 250/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 DKITPSSTTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIF-NASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F S I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|257784983|ref|YP_003180200.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
gi|257473490|gb|ACV51609.1| cysteinyl-tRNA synthetase [Atopobium parvulum DSM 20469]
Length = 493
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 176/506 (34%), Positives = 243/506 (48%), Gaps = 73/506 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT K EF+ ID IRMYVCGPTVYD HIGNAR + FDV+ R L Y E
Sbjct: 1 MLVYNTQTHKKEEFKPIDEGKIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMYKGFE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ +N+TD+DDKII+RA ++ + ++ + +Q F+K R L P +PR
Sbjct: 60 -VTFAQNLTDVDDKIIQRANEQGRTA------QEVSEEFSQAFIKQMHRFNILDPDIRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+ I M+ +IQ++I G+AY + ++ F S +YG S R +D+ + G RV
Sbjct: 113 ATHEIEAMLQMIQSLIEQGYAYAVPSGDVYFSVRSDHDYGVLSGRDLDQLRAGERVEVND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWH EC AM YLG DIHGGG DL+FP
Sbjct: 173 EKRDPFDFALWKAAKPGEPSWSSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGSDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ CA AN W+H G L ++G KMSKS GNF T+ E+L+ +P
Sbjct: 233 HHENETAQASCAWHA-PLANYWMHTGMLRVDGEKMSKSLGNFYTLKEVLD-------KYP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLT-------------EAEILLSKWPQTSTSKGIIDPA 350
A +RL ML THYR P+DF+ +RL K D
Sbjct: 285 ADAVRLLMLQTHYRAPLDFSFERLEGTVGTLERMKTCVANLRWAYKQSSAQHELSDADRT 344
Query: 351 VLS-----------ALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFN 386
+ + +D NT A+ A+ L + +
Sbjct: 345 LAEAINIAQSEFDAQMDDDFNTAGALAAIFALVTAANTYLAEVGQNVGASPVLRASDMLC 404
Query: 387 ASAHILGIEVCKEHLNKNISIA-------------------IEKLVQERLILLKMKKFSS 427
LGI++ + ++ E L+ R K ++
Sbjct: 405 ELTGALGIDLTQAASTSDLPEELVALAAQVAAYEGSSADEAAEVLLAARQEARSQKNWAV 464
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQR 453
AD IR + G ++ED +R
Sbjct: 465 ADQIRDGIAELGLLIEDTAAGARLKR 490
>gi|188995669|ref|YP_001929921.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
gi|188595349|dbj|BAG34324.1| cysteinyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 486
Score = 356 bits (913), Expect = 4e-96, Method: Composition-based stats.
Identities = 163/493 (33%), Positives = 235/493 (47%), Gaps = 54/493 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL RK F+ I ++ +YVCGPTVY AH+G+ARP I FD+LYR LR+ +
Sbjct: 1 MEIYNTLHRKKERFEPIHEPHVGLYVCGPTVYGDAHLGHARPAITFDLLYRYLRHLGYQ- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V YVRNITD+ +DKI ++AR E + ++ L
Sbjct: 60 -VRYVRNITDVGHLEHDADEGEDKIAKKARLEQLE------PMEVVQYYLTRYRHAMEVL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRRKID 171
L P+ +P A+ HI + I L++ I+ G+AYE+ + FD S R I+
Sbjct: 113 NVLPPSIEPMASGHIIEQIELVKQILKAGYAYESCGSVYFDVEKYNQDHRYGVLSGRNIE 172
Query: 172 EQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK 229
E TR + +K DF LWK + P W SPWG G PGWH EC+AM YLG+
Sbjct: 173 EMINNTRRLDGQDEKRNGVDFALWKAAQPEHIMRWPSPWGMGFPGWHCECTAMGRKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGG+DL+FPHHE EIAQ+ + W+HN + + G+KM KS GNFIT+
Sbjct: 233 EFDIHGGGMDLVFPHHECEIAQAVASQG-HPIVRYWMHNNMITINGQKMGKSLGNFITLE 291
Query: 290 ELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------- 337
E +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 EFFSGAHPSLNKAYSPMTIRFFILGAHYRGTVDFSNEALEAAEKGLERLLDAAALLDGLK 351
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLP 383
TS G + A+ +DLN+ I AL AR +L
Sbjct: 352 TADTTSVEVGDLRKRCYDAMNDDLNSPMVIAALFDAARAINAVHNGQGTITPSDLEELRT 411
Query: 384 IFN-ASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F +LG+ + A++ L+ R K ++++D IR +L + G
Sbjct: 412 TFRLFLFDLLGMCDERASSAGGSEAFGKAMDLLLSIRAEAKARKDWATSDKIRDELTALG 471
Query: 440 FILEDYKNPDNGQ 452
F ++D K+ +
Sbjct: 472 FTIKDTKDGAEWK 484
>gi|153807261|ref|ZP_01959929.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
gi|149130381|gb|EDM21591.1| hypothetical protein BACCAC_01539 [Bacteroides caccae ATCC 43185]
Length = 493
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADEGEDKIAKKARLEELE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + +
Sbjct: 292 ITLDEFFNGTHKLLTQAYTPMTIRFFILQAHYRSTVDFSNEALIASEKGLQRLIEAIDGL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLAREST---------KNHD 380
G + P A+ +DLNT I L + AR D
Sbjct: 352 GKVTPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNVIAGNATISAED 411
Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
L + I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKELKETFHLFCFDIMGLKEEKGSSDSRENAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|42520052|ref|NP_965967.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|99036051|ref|ZP_01315087.1| hypothetical protein Wendoof_01000057 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
gi|59798568|sp|Q73IL1|SYC_WOLPM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|42409789|gb|AAS13901.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 457
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 199/474 (41%), Positives = 274/474 (57%), Gaps = 41/474 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +K F ID +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG
Sbjct: 3 RLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYG--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I I++ T+ F +D + C PTH+P+A
Sbjct: 61 VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T ++ +I LI++++ GHAYE++ + F+ S YG+ S +K DE G+RV +K
Sbjct: 115 TKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENK 174
Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+P DF+LWK + ++ W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL
Sbjct: 175 KHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQ 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A WIHNGFL + KMSKS N + + +LL++
Sbjct: 235 FPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDS------G 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
VIR A+L THYR+P+D+T +++A+ L+K+ + S I +
Sbjct: 289 IKGEVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFI 348
Query: 353 SALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE---VCKEHLNK 403
AL NDLN A+ LH++A + K L F SA +G+ K
Sbjct: 349 DALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYEKWFAVD 408
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE+L+ R I K K + +AD IR QL+ G + D ++ T W
Sbjct: 409 VNHQEIERLIDLRKIAKKNKNYDTADKIRDQLKQMGITISDNEDGT-----TTW 457
>gi|256786300|ref|ZP_05524731.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
Length = 479
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 162/482 (33%), Positives = 246/482 (51%), Gaps = 48/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y +
Sbjct: 16 IRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGYD- 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKII +A ++ N I +N + F L CL PT++PR
Sbjct: 75 -VTFVRNVTDIDDKIIRKAAEQ------NRPWWSIGYENERAFNDAYAALGCLPPTYEPR 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +M+ +++ +I GHAYEA+ + FD S+P Y S S + +DE + +
Sbjct: 128 ATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSLPGYLSLSNQDLDELRQ-PSEDGETG 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGG+DLIFPH
Sbjct: 187 KRDLRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEEFDIHGGGIDLIFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A W+HN ++ + G KMSKS GN + ++E++ + WP
Sbjct: 247 HENEIAQAKGFGDA--FARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KKWPP 297
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------QTSTSKGIIDPAVLS 353
V+R + HYR I+++ + L EAE + + PA
Sbjct: 298 VVLRYYLGTPHYRSTIEYSEESLREAESAYGRIEGFVQRVTELAGHAVEPAAEVPPAFAE 357
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN 404
A+ +DL A+ +H R+ L A +LG++
Sbjct: 358 AMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAVARLAEVRAMLGVLGLDPLDAQWAGE 417
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ +R K +++AD IR +L G ++ED
Sbjct: 418 QAQGEDLRHVVDSLVRLVLDQREGARARKDWATADAIRDRLGQSGLVIEDSPQGPRWSLG 477
Query: 455 TR 456
+R
Sbjct: 478 SR 479
>gi|297158396|gb|ADI08108.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 466
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 160/484 (33%), Positives = 249/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFNPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ N I +N + F L CL T++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSAEQ------NRPWWAIGYENERAFNSAYDVLGCLPVTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAY A + FD S P Y S +++D + + +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYAAEGSVYFDVRSYPGYLQLSNQELDGLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
Y K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 YGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGVDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DDFATYWTHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----------IDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRVTEKAGKVVPPAPEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +D A+ +H R+ L A +LG++ EH
Sbjct: 343 AEAMDDDFGVPQALAVVHTTVRQGNSALTADDKESAVARLAEVRAMLGVLGLDPLDEHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K +++AD IR QL+ G ++ED + +
Sbjct: 403 GGPDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIEDTPSGPRWE 462
Query: 453 RMTR 456
+R
Sbjct: 463 LGSR 466
>gi|300770934|ref|ZP_07080811.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762207|gb|EFK59026.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
Length = 488
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 157/496 (31%), Positives = 223/496 (44%), Gaps = 52/496 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNT+ RK +F I PS + MYVCGPTVY H+GN R + FD+++R L +
Sbjct: 1 MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYLLHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK ++A+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE------PMEIVQKYTIGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L P+ +P AT HI + I +I+ II +G+AYE N + FD +Y +
Sbjct: 113 LRLFNTLPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
RK+++ TR +K DF LW K W +PW G PGWHIECSAMS+
Sbjct: 173 RKLEDLLNNTRELGGQDEKRGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSNK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL HH NEIAQS + A W+H L + G +MSKS+GN
Sbjct: 233 YLGAQFDIHGGGMDLAATHHTNEIAQSEACNHTSP-ARYWMHTNMLTVNGARMSKSSGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
EL R + +R ML HYR +DF+ + L A+ +
Sbjct: 292 FLPQELFTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIALL 351
Query: 342 -----------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
+ I +A+ +D N+ I L ++ R +D N
Sbjct: 352 NKITPSKATSGFNLEDIRKNCYAAMDDDFNSPILIAELFEVVRIINSIYDGKSTINQKGL 411
Query: 390 ------------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
ILG+ N+ + ++ R + K F+++D IR++L S
Sbjct: 412 DELKAFMKDFVEDILGLNDDSNAGTDNMDELMNVIINIRNSAKQNKDFATSDRIREELSS 471
Query: 438 KGFILEDYKNPDNGQR 453
G L+D K+ +
Sbjct: 472 IGIQLKDSKDGTLWNK 487
>gi|332884059|gb|EGK04339.1| cysteinyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
Length = 491
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 161/498 (32%), Positives = 238/498 (47%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ +YNTL RK F+ + ++ MYVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MEQKLLVYNTLTRKKEVFEPLHAPHVGMYVCGPTVYGDGHLGHARPAITFDILFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLENDADEGEDKIAKKARLEQLE------PMEVVQYYVNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L+P+ +P A+ HI + I I+ I+ G+AYE+N + FD
Sbjct: 113 MDALNVLSPSIEPHASGHIIEQIEAIKGILKAGYAYESNGSVYFDVEKYNKDYDYGILSH 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + + K++ DF LWK++ P W SPW G PGWHIECS MS
Sbjct: 173 RNIEEMLNTTRELDGQEEKRSRVDFALWKKAAPEHIMRWPSPWSDGFPGWHIECSTMSIK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGGLDL+FPHHE EIAQ+ A + W+HN + + G+KM KS GNF
Sbjct: 233 YLGREFDIHGGGLDLMFPHHECEIAQNT-AMEKHQVVRYWMHNNMITIGGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L AE L +
Sbjct: 292 ITLDEFFTGSHKMLVQAYSPMTIRFFILQAHYRSTVDFSNEALQAAEKSLERLYDAYARI 351
Query: 345 GIID-------------PAVLSALYNDLNTVSAIQALHKLARESTKN------------H 379
I AL +DLN+ I L + +
Sbjct: 352 EKIPVSATSSVDVKNIRNKCYEALNDDLNSAIVIAHLCEAGTTINSASTGNITLSQEDIN 411
Query: 380 DLLPIFN-ASAHILGIEV----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+L +F+ ILGI N+ A++ L++ R + K ++++D IR +
Sbjct: 412 ELKEVFDIFLFGILGIRNDAIGANSGNNEAFGKAVDLLLEIRQKAKENKDWATSDQIRNE 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L GF ++D K+ +
Sbjct: 472 LAKAGFEIKDGKDGAEWK 489
>gi|218290036|ref|ZP_03494203.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239870|gb|EED07058.1| cysteinyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 474
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 179/498 (35%), Positives = 246/498 (49%), Gaps = 65/498 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YN+L K Q ++P +R Y CGPTVY F H+GNAR +VFD + R L Y
Sbjct: 1 MGIVLYNSLTGKKEPLQTLEPGKVRFYACGPTVYHFFHLGNARMFVVFDTIRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V+N TDIDD+II+RA++ S + +N + + +D +L T
Sbjct: 61 E--VLFVQNFTDIDDRIIQRAQELGIS------PRELAEENIRYYFEDAGKLFIRPATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + +I IQ++I GHAYE N + FDTSS P YG S + ++ + G R+ +
Sbjct: 113 PRVTECVDDIIRFIQDLIDRGHAYERNGSVYFDTSSFPEYGKLSHQSPEDMRAGYRIEVQ 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P E W SPWG GRPGWHIECS M+ YLG+ DIH GG DLIF
Sbjct: 173 DEKDDPTDFALWKAAKPGEEWWPSPWGPGRPGWHIECSVMNYLYLGEQIDIHAGGRDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG LN+ G KMSKS GNFI +LLE +
Sbjct: 233 PHHENEIAQSEAHSG-KTFARYWLHNGTLNINGEKMSKSTGNFIMARDLLERR------- 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+R +L HYR P+++T + L +AE LS+ +
Sbjct: 285 DPRAVRFFLLSAHYRNPLNYTEEALDQAEQALSRIDRLIRDLDHRAEALKAMRGALDRAD 344
Query: 346 ------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------L 382
I A + A+ +D NT + A+ R +
Sbjct: 345 EVPSTQGRSDVEQIRSAFIQAMDDDFNTADGMAAIFDGVRLVNTRLEEGGVTLGDLHLYR 404
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+F +LGI +E ++ +L+ ER K + F+ AD IR QL +G +L
Sbjct: 405 DLFVELLGVLGIPKKEEERLEDEIE---RLIAERAEARKRRDFARADEIRDQLRHRGIVL 461
Query: 443 EDYKNPDNGQRMTRWKQK 460
ED TRW +
Sbjct: 462 EDT------PYGTRWSYE 473
>gi|114768989|ref|ZP_01446615.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
gi|114549906|gb|EAU52787.1| cysteinyl-tRNA synthetase [alpha proteobacterium HTCC2255]
Length = 455
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 200/460 (43%), Positives = 271/460 (58%), Gaps = 25/460 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YN R F+ ID N+RMYVCGPTVYD AHIGNARP++VFD+LYRLLR+ YG
Sbjct: 1 MSIKLYNVKNRTKEAFKPIDERNVRMYVCGPTVYDRAHIGNARPVVVFDILYRLLRHTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V+Y RN TD+DDKI +A I +I IT++ +++D T L L P +
Sbjct: 61 INSVSYARNFTDVDDKINIKA------ISTGKSIREITNETINWYIEDMTALGALEPDYA 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +I +MI + +I GHAY A ++FD SS YG S R ID+ G RV
Sbjct: 115 PRATEYISEMIEMSSELIKKGHAYVAEGHVLFDVSSYEAYGELSGRSIDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF+LWK S +PGWESPWG GRPGWHIECSAM+ G+ FDIHGGGLDL F
Sbjct: 175 PYKRNPMDFVLWKPSNNDQPGWESPWGFGRPGWHIECSAMARALFGEKFDIHGGGLDLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSC + AN+W+HN L +EG+KMSKS GNF ++ ELL+ + +
Sbjct: 235 PHHENEIAQSCACCGQDSFANVWLHNEMLQVEGKKMSKSLGNFFSVKELLD------KGF 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDL 359
V+R L THY +P+D+TV++ EAE+ L KW + + I V+ AL +DL
Sbjct: 289 SGEVVRFVYLSTHYSKPMDWTVKKAEEAELTLRKWRKLTNGVQVTKHISKGVIDALNDDL 348
Query: 360 NTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKLVQ 414
NT A+ LH LA+ + +SA ILG+ + + ++S E ++
Sbjct: 349 NTSKALTVLHGLAKSGN-----IEELKSSAQILGLLSDQMGAWVKENTFDLSKLEEIILA 403
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R +K K+F+ D ++ S G ++ K+ +
Sbjct: 404 SRDKAMKTKEFTELDNLKNLFISAGLDVQMSKDGIKLIKG 443
>gi|260428499|ref|ZP_05782478.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
gi|260422991|gb|EEX16242.1| cysteinyl-tRNA synthetase [Citreicella sp. SE45]
Length = 474
Score = 356 bits (913), Expect = 5e-96, Method: Composition-based stats.
Identities = 204/473 (43%), Positives = 264/473 (55%), Gaps = 31/473 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I + N+ RK F+ IDP ++R+YVCGPTVYD AH+GNARP IVFDVL+RL+R YG
Sbjct: 1 MDISLTNSRTRKKEPFRPIDPEHVRIYVCGPTVYDRAHLGNARPAIVFDVLFRLMREVYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRN TD+DDKI RA++ S I IT++ TQ ++ D + + PTH
Sbjct: 61 ADHVTYVRNFTDVDDKINARAKESGRS------IGEITAETTQWYLDDMAAVGVMEPTHM 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT +I QM+ +I +I GHAYEA ++F S YG+ S R +D+ G RV
Sbjct: 115 PRATQYIGQMVAMISELIEKGHAYEAEGHVLFAVESYTAYGALSGRSVDDMIAGARVEVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV------------ 230
+K+NP DF+LWK S P PGWESPWGRGRPGWHIECSAM+ L K
Sbjct: 175 PYKRNPMDFVLWKPSEPDLPGWESPWGRGRPGWHIECSAMAEELLWKTPLEEGRLSEAAL 234
Query: 231 -----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
FDIHGGG DL FPHHENEIAQSCCA+ +E A W+HN L +EG+KMSKS GNF
Sbjct: 235 AHPHLFDIHGGGNDLTFPHHENEIAQSCCANGVEHMAQTWLHNEMLQVEGKKMSKSLGNF 294
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--S 343
T+ +LL+ P VIR ML THYR+P+D+T ++ E E L KW
Sbjct: 295 FTVRDLLDGHDGLP-GVPGEVIRFVMLSTHYRKPMDWTAEKAREGEATLRKWRAMVDGLE 353
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHL 401
G + VL A+ +DLNT AI LHKLA LG +
Sbjct: 354 AGPVPEGVLKAVADDLNTAGAIAELHKLAGAGDAAALKAGAGLLGLLTPELG---DWAAV 410
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ +++ ++L R ++ K FS D ++ L + G + K
Sbjct: 411 SVDLTALADRLAGARSAAMESKDFSEVDRLKTALLAAGVEVRMSKAGVELLPG 463
>gi|299147030|ref|ZP_07040097.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
gi|298514915|gb|EFI38797.1| cysteine--tRNA ligase [Bacteroides sp. 3_1_23]
Length = 493
Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats.
Identities = 169/498 (33%), Positives = 250/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIF-NASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F S I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|255530399|ref|YP_003090771.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
gi|255343383|gb|ACU02709.1| cysteinyl-tRNA synthetase [Pedobacter heparinus DSM 2366]
Length = 486
Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats.
Identities = 161/496 (32%), Positives = 228/496 (45%), Gaps = 52/496 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K + +YNTL R F+ + N+ MYVCGPTVY H+GN R I FD+++R L+Y
Sbjct: 1 MDKGLHLYNTLTRTKELFEPLHAPNVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK +RA+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLE------PMEIVQKYTLGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L P+ +P AT HI + I +I+ I+ +G+AYEAN + FD NY +
Sbjct: 113 LRMFNTLPPSIEPTATGHIIEQIEMIKVIMDNGYAYEANGTVYFDVEKYSASYNYTILTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
R +++ TR +K DF LW K W SPWG G PGWHIECSAMS+
Sbjct: 173 RNLEDMLANTRELGGQDEKRGRLDFALWIKAKPETIMRWPSPWGIGFPGWHIECSAMSAK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL HH NEIAQS + + A W+H L + G +MSKS GN
Sbjct: 233 YLGEEFDIHGGGMDLAATHHTNEIAQSEACNHKQP-AKYWMHTNMLTVNGARMSKSAGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
EL R + ++ ML HYR +DF+ + L +E + T
Sbjct: 292 FLPGELFTGDHPLLDRGYSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVTLL 351
Query: 345 GIIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
+ P + A+ +D N+ I L + R +D
Sbjct: 352 DKLVPAAESDFEIDPIASNCIRAMNDDFNSPVVIAELFEATRIINIVYDGKGKISVAELG 411
Query: 381 -LLPIFNAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
L + I G++ +E N ++ +E ++ R + K ++++D IR L+S
Sbjct: 412 KLKKLVKDFVFDIFGLK-DEEASNTELNDVLEMMIDIRKAAKENKDYATSDKIRVGLQSM 470
Query: 439 GFILEDYKNPDNGQRM 454
G L+D K ++
Sbjct: 471 GIQLKDSKEGTTWNKV 486
>gi|25029072|ref|NP_739126.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
gi|259505936|ref|ZP_05748838.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
gi|23494359|dbj|BAC19326.1| conserved hypothetical protein [Corynebacterium efficiens YS-314]
gi|259166417|gb|EEW50971.1| cysteine--tRNA ligase [Corynebacterium efficiens YS-314]
Length = 479
Score = 356 bits (913), Expect = 6e-96, Method: Composition-based stats.
Identities = 146/472 (30%), Positives = 226/472 (47%), Gaps = 41/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++T R + EF + P + +Y+CG T HIG+ R + FD+L R L +
Sbjct: 23 LRIFDTATRTLREFIPLKPGHASVYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGLD- 81
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN+TDIDDKI+ +A + S ++F L L P+ +PR
Sbjct: 82 -VAFVRNVTDIDDKILTKAAEHG------RPWWEWVSTYEREFTWAYNTLGVLPPSVEPR 134
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+ QM+ +Q +I +G AYE N + FD ++ + ++ +
Sbjct: 135 ATGHVTQMVQYMQRLIDNGFAYEVNGSVYFDVTAWVAAEGSDYGSLSGNRVEDMEQGETD 194
Query: 185 K---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG FDIH GGLDL
Sbjct: 195 NFGKRGPQDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATYYLGAEFDIHCGGLDLQ 254
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+ A A W+HN ++ + G KMSKS GN +++ +LE +
Sbjct: 255 FPHHENEIAQAHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPNMLEKVR----- 307
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALY 356
+R + HYR ++++ LTEA + G ++ +A+
Sbjct: 308 --PVELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEAFVDRVGEVEVGTWTAGFEAAMD 365
Query: 357 NDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
DL A+ +H RE K +L A +LG + + + S
Sbjct: 366 EDLAVPKALAEIHNAVREGNSALAAGEMEKARELAGAVRAMTGVLGFDPVEWGTQTDDSA 425
Query: 408 AIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
A E L ++ R K ++ AD +R +L + G + D + + +
Sbjct: 426 AHEALEVLVHAELERRATARAEKDWAVADEVRDRLAAAGIEVVDTADGVSWK 477
>gi|225629958|ref|YP_002726749.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
gi|254781700|sp|C0R5B6|SYC_WOLWR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|225591939|gb|ACN94958.1| Cysteinyl-tRNA synthetase [Wolbachia sp. wRi]
Length = 457
Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats.
Identities = 194/474 (40%), Positives = 272/474 (57%), Gaps = 41/474 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +K F ID +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG
Sbjct: 3 RLYNTLTKKKELFIPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYG--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I IT+ + F D + C PT++P+A
Sbjct: 61 VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKKPTYEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T ++ +I LI++++ GHAYE++ + F+ S YG+ S +K DE G+RV +K
Sbjct: 115 TENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENK 174
Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+P DF+LWK + ++ W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL
Sbjct: 175 KHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQ 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNGFL + KMSKS N + + +LL++
Sbjct: 235 FPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEEKMSKSLFNIVKVRDLLDS------G 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVL 352
VIR A+L THYR+P+D+T +++A+ L+K+ + S I +
Sbjct: 289 IKGEVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFI 348
Query: 353 SALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE---VCKEHLNK 403
AL NDLN A+ LH++A + K L F SA +G+ +
Sbjct: 349 DALKNDLNIPEALAILHEMAAKINKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTAG 408
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE+L+ R + K +++AD IR QL+ G + D ++ T W
Sbjct: 409 VSHQEIERLIDLRRAAKQNKDYNTADKIRDQLKQIGVTISDNEDGT-----TTW 457
>gi|288928857|ref|ZP_06422703.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
gi|288329841|gb|EFC68426.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 317 str. F0108]
Length = 543
Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats.
Identities = 156/500 (31%), Positives = 236/500 (47%), Gaps = 59/500 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL RK F+ + N+ MYVCGPTVY H+G+ARP I FDV++R L++
Sbjct: 50 SPLLIYNTLTRKKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDVVFRYLQHQGY 109
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD+ DDKI ++AR E I T +
Sbjct: 110 --KVRYVRNITDVGHLEHDADDGDDKIAKKARLEQLE------PMEIAQHYTNTYHAAMQ 161
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRRK 169
L L P+ +P+A+ HI + L++ I+ +G AYE+N I FD + S R
Sbjct: 162 LLNVLPPSIEPQASGHIIEQEELVKKILANGFAYESNGSIYFDIAKYNETHRYGILSGRN 221
Query: 170 IDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
+++ ++ K+N ADF LWK + P W SPWG G PGWH EC+AM YL
Sbjct: 222 LEDVLDASRKLDGVGEKRNQADFALWKHAQPEHIMRWPSPWGDGFPGWHCECTAMGRKYL 281
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G+ FDIHGGG+DLIFPHHE EIAQ+ A+ E+ W+HN + + G+KM KS GNFIT
Sbjct: 282 GEHFDIHGGGMDLIFPHHECEIAQAVAAEG-EQMVRYWMHNNMITINGQKMGKSLGNFIT 340
Query: 288 INELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------- 337
+ + +++ IR +L HYR +DF+ + L +E L +
Sbjct: 341 LEQFFNGAHPALEKAYSPMTIRFFILSAHYRGTVDFSNEALQASEKGLERLLNGIADLQR 400
Query: 338 --------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDL 381
T+T + A+ +D T + L + R + +
Sbjct: 401 IQPAKTSDEATATIVNELPRKCYEAMNDDFQTPMVLSHLFEACRLINTLIDHKAQISAEH 460
Query: 382 LPIFNASAHILGIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIR 432
L + H+ ++ + + ++ ++ R K ++++D IR
Sbjct: 461 LEQLATTMHLFAFQLLGLNADNGNNNDAREEAFGHVVDMVLDLRAKAKADKDWATSDRIR 520
Query: 433 KQLESKGFILEDYKNPDNGQ 452
+L S GF ++D K+ +
Sbjct: 521 DELASAGFEVKDTKDGATWK 540
>gi|78189774|ref|YP_380112.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
gi|109894890|sp|Q3APK6|SYC_CHLCH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78171973|gb|ABB29069.1| cysteinyl-tRNA synthetase [Chlorobium chlorochromatii CaD3]
Length = 480
Score = 355 bits (912), Expect = 6e-96, Method: Composition-based stats.
Identities = 160/492 (32%), Positives = 239/492 (48%), Gaps = 59/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R F+ + + +YVCGPTVY AH+G+A+ I FDV+ R R
Sbjct: 1 MALAIYNSLSRTKEIFEPLHSGVVSIYVCGPTVYGHAHLGHAKSYISFDVVVRWFRQSGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y++NITD+ +DKI+++AR E I T+ F +D
Sbjct: 61 --KVKYIQNITDVGHLTDDADEGEDKIMKQARLEKTD------PMEIAQFYTRSFYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P P AT HIP+ I L++ ++ G+AYE N + F +S YG S R E
Sbjct: 113 RLGVERPNIAPTATAHIPEQIALVETLLRKGYAYEVNGNVYFSVNSFAGYGKLSGRTDQE 172
Query: 173 Q-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G+RV + K++ +DF LWK++ W+SPW G PGWH+ECSAM+ YLG+
Sbjct: 173 ALQSGSRVGIRSEKRDASDFALWKKAEEGHIMKWQSPWSVGYPGWHLECSAMAMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQS A + W+HN + + G KM KS NF+ + E
Sbjct: 233 IDIHGGGMENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLKNFVNLKE 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV-------QRLTEAEILLSKWPQTSTS 343
LL+T+ +R +L +HYR P+D++ Q L + L ++ +
Sbjct: 292 LLQTR-------NPLALRFFILQSHYRSPLDYSEAALDAAAQGLEKLHETLRRFRHQAAG 344
Query: 344 KGIID-----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------------ 386
G +D A+ +D NT AI L L++ D I
Sbjct: 345 SGSLDVTPYAERFSEAMNDDFNTPIAIAVLFDLSKAINSALDSKGIVEADRAAIEAFLTI 404
Query: 387 ASAHILGI---EVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
A+ + LGI + E N N + ++ +++ R K K F+++D IR L + G
Sbjct: 405 AATNTLGIASNNLADEQSNGNSMQRLDKVMQIMLELRHNARKQKDFATSDKIRDMLLAAG 464
Query: 440 FILEDYKNPDNG 451
++D K
Sbjct: 465 IEIKDTKEGAVW 476
>gi|149369775|ref|ZP_01889626.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
gi|149356266|gb|EDM44822.1| cysteinyl-tRNA synthetase [unidentified eubacterium SCB49]
Length = 493
Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats.
Identities = 156/494 (31%), Positives = 239/494 (48%), Gaps = 54/494 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++ IYN+L + F I+ + +YVCGPTVY H+GN R + FD+++R L++
Sbjct: 6 EQQVHIYNSLTKAKEVFTPINEGAVGLYVCGPTVYSNVHLGNCRTFLSFDLVFRYLKHL- 64
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YVRNITD DD I ++AR E N + K T F
Sbjct: 65 -DYKVRYVRNITDAGHLENDGESGDDPIAKKARLE------NIEPMEVVQKYTVDFHDTM 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
+ P+ +P AT HI + I ++Q+II G+ YE N + FD + +YG S R
Sbjct: 118 AKFNAFPPSIEPTATGHIIEQIEIVQDIIKKGYGYEKNGSVYFDVTKFNEDHDYGKLSGR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ + + KKNP DF LWK++ P W SPW G PGWH+EC+AMS+ Y
Sbjct: 178 NLEDMVSNSRELAGQSEKKNPQDFALWKKAEPKHIMRWPSPWSDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL FPHHE EIAQ+ + E N+W+H L L G+KMSKS GN I
Sbjct: 238 LGNKFDIHGGGMDLKFPHHECEIAQAEACNN-ESPVNVWMHANMLTLNGKKMSKSTGNNI 296
Query: 287 TINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+EL+ +++PA V + M HYR +DF+ + L +E ++ ++ +
Sbjct: 297 LPSELISGNNDILNKAFPATVAKFFMYQAHYRSILDFSNEALEASEKGYNRLMESYRNID 356
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPI 384
+ + A+ +D N+ I L + + D +
Sbjct: 357 ALPVSEMTSMNVSTWKQSCYDAMNDDFNSPILIAQLFEATKFINGVKDGNEKLSETDKAL 416
Query: 385 FNA-----SAHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +LG+E + + A+ L+Q R K ++ +D IR QL+
Sbjct: 417 LKSTMHAFIFDVLGLEDVSMEGSGDSSKLEGAMNLLIQLRNEARANKDWAKSDEIRDQLQ 476
Query: 437 SKGFILEDYKNPDN 450
G L+D K+
Sbjct: 477 EIGIQLKDGKDGTT 490
>gi|319786826|ref|YP_004146301.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
gi|317465338|gb|ADV27070.1| cysteinyl-tRNA synthetase [Pseudoxanthomonas suwonensis 11-1]
Length = 458
Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats.
Identities = 182/478 (38%), Positives = 263/478 (55%), Gaps = 42/478 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YN+L R++ F +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR +G
Sbjct: 1 MSLRLYNSLTRQVEAFAPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRHG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC---LAP 119
+ Y RNITD+DDKI A ++ IS+IT + + +D L AP
Sbjct: 61 --ALKYARNITDVDDKINAAAAEQGV------PISVITDRFAAAYREDMAALGVAGDFAP 112
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P AT HI QMI + + ++ GHAY A ++F +S +YG SRR +E G RV
Sbjct: 113 DIEPTATGHIAQMIAMCERLVAEGHAYAAEGHVLFSVASFADYGRLSRRDTEEMLAGARV 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+K++P DF+LWK S+ PGW+SPWGRGRPGWHIECSAM+ +LG+ DIH GG+D
Sbjct: 173 EVAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAEAHLGQTIDIHAGGID 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS CA A W+HNG LN G KMSKS GN +++L+
Sbjct: 233 LQFPHHENEIAQSQCAHGGAPFARYWLHNGMLNFGGAKMSKSLGNIEKVHDLV------- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------S 353
R+ P +R A++ HYR+P++++ + ++ L + T I+ + + +
Sbjct: 286 RAHPPEALRYALISAHYRQPLEWSDALVEQSVRTLDRLYGTLRDLADIEASPVIPAEIEA 345
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIE----------VCKEHL 401
AL +DLNT A+ L ++A E+ K D + G+ +
Sbjct: 346 ALDDDLNTPLALAELARIAGEARKATDASERARLKSGLLGAGLALGLLQQAPEAWFNRGI 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ + I+ LV ER K + F+ AD +R QL ++G +LED + RWK+
Sbjct: 406 SNDDDARIQALVDERGAAKKARDFARADALRDQLAAEGILLEDT------PQGVRWKR 457
>gi|67458460|ref|YP_246084.1| cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
gi|75537070|sp|Q4UND9|SYC_RICFE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|67003993|gb|AAY60919.1| Cysteinyl-tRNA synthetase [Rickettsia felis URRWXCal2]
Length = 459
Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 276/476 (57%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D + ++MYVCGPTVYD HIGN+R ++V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQTKVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GE+ V YVRNITD+DDKII+RA ++ I+ +T K TQ+F + L CL P+
Sbjct: 61 FGEQSVKYVRNITDVDDKIIDRAE------LLSITINELTDKVTQEFHTNMAYLGCLLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G R+
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KK+P DF+LWK + P E ++SPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFKSPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRNLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KEISGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDLLPI----FNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ +K + + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEEKQLNASAIITCANFIGLMNKTPHEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I +L+ +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYINELLNKRLEAKKQKNWLLADQIRNQLLEEKIILEDKPDGT-----TIWRKE 459
>gi|57239053|ref|YP_180189.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|58578996|ref|YP_197208.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|81819263|sp|Q5HBK5|SYC_EHRRW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|57161132|emb|CAH58045.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|58417622|emb|CAI26826.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
Length = 457
Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats.
Identities = 200/473 (42%), Positives = 273/473 (57%), Gaps = 39/473 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R F +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL Y V
Sbjct: 3 IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLY--PKV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TY+RNITDIDDKII A+ N I +T++ + F +D RL CL PT++PRAT
Sbjct: 61 TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+I M+ LI+ +I +GHAY +N + FD S P YG S R I E G+R+ + KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYICDNTVFFDIESYPAYGKLSGRNIMELIYGSRIDIEVGKK 174
Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+P DF+LWK +T ++ W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDNKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA A WIHNGFL + KMSKS GNF+T+ +LL++
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDS------GI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSA 354
VIR L THYR+P+D+ ++ A+ L++ + ++S
Sbjct: 289 RGEVIRYIFLSTHYRKPLDWNDNVVSNAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEV--CKEHLNKNIS 406
L +D+NT AI LH++ K D+ + + SA+ LGI +E +
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILYHSWQEWFKVDND 408
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I +L+ ER + F AD IR+ L KG +L D K+ T W +
Sbjct: 409 QDIIQLIHERKMAKTNGDFRKADRIRQILLDKGIVLSDNKDGT-----TLWYR 456
>gi|293368873|ref|ZP_06615476.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
gi|292636022|gb|EFF54511.1| cysteine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
Length = 493
Score = 355 bits (912), Expect = 7e-96, Method: Composition-based stats.
Identities = 168/498 (33%), Positives = 250/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 DKITPASATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIFNAS-AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F+ I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDKIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 ALTALGFEIKDTKDGFEW 489
>gi|251771305|gb|EES51886.1| cysteinyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
Length = 485
Score = 355 bits (911), Expect = 7e-96, Method: Composition-based stats.
Identities = 175/489 (35%), Positives = 236/489 (48%), Gaps = 50/489 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I +YN+L RK+ F P ++MYVCG TVYD H+G+AR +VFD L+RL
Sbjct: 1 MPPSISLYNSLSRKVEPFIPQTPGEVKMYVCGVTVYDDCHLGHARSQMVFDTLHRLFLET 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V YVRNITDIDDKII +A + I IT + F +D RL L+P
Sbjct: 61 G--HRVRYVRNITDIDDKIIRKAAEAGV------PIENITRTFIESFSRDMGRLGILSPE 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT + M+ LI ++ G AY + ++ F S YG S + +++ + G R+
Sbjct: 113 REPRATEFLDSMVALIDRLLSLGSAYRSGGDVYFRVRSFSGYGGLSHQILEDLRSGARIE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK + P EP + +P+G GRPGWHIECSAMS HYLG D+HGGG+DL
Sbjct: 173 PGEEKEDPLDFVLWKGAKPGEPSYPAPFGPGRPGWHIECSAMSLHYLGPTLDLHGGGMDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENE AQS A + A W+HNGF+ KMSKS GN I E F
Sbjct: 233 LFPHHENERAQSEAATG-QTFARTWMHNGFVTTSQEKMSKSLGNTRRIRAFFEDSPF-PE 290
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------TSKG 345
+ +R L THYR P+DFT L A+ L Q G
Sbjct: 291 AVTREWLRYFFLGTHYRSPVDFTEGGLASAKNALDGLHQCRALLLECLSAEAPEGDPIAG 350
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNASAHIL 392
+ + + AL +DL+T A+ LH ++ +F+ + L
Sbjct: 351 PLLSSFMEALSSDLDTPVALSVLHGAKSRINPWLASGGSGSPPVDPREVRALFSLAGRTL 410
Query: 393 GIEVCKEH------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
GI IE+LV R K + F AD +R QL + G
Sbjct: 411 GILTTDPSSWIGGEGRDGGGGEGLSPEEIERLVHLREEARKARDFKQADALRDQLRAAGV 470
Query: 441 ILEDYKNPD 449
+LED
Sbjct: 471 VLEDQPGGP 479
>gi|302535869|ref|ZP_07288211.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
gi|302444764|gb|EFL16580.1| cysteinyl-tRNA synthetase [Streptomyces sp. C]
Length = 466
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 161/484 (33%), Positives = 247/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F ++ + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFVPLEQGCVSIYLCGATVQAAPHIGHIRSGLNFDMMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN+TDIDDKII ++ ++ I +N + F T L CL PT++
Sbjct: 61 D--VTFVRNVTDIDDKIIAKSAEQ------RRPWWSIGYENERAFNDGYTALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +M+ +++ +I GHAYE+ + FD S P Y S SR+++ + +
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYESEGNVYFDVKSFPGYLSLSRQEL-DNIRQPESTGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSVKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ AN W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFGDA--FANYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KQW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFYQRVIEKAGGPVEAAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAIVHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K +++AD IR QL G ++ED +
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLEQRESARARKDWATADAIRDQLNQSGLVIEDSPSGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|213963733|ref|ZP_03391983.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
gi|213953613|gb|EEB64945.1| cysteinyl-tRNA synthetase [Capnocytophaga sputigena Capno]
Length = 490
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 161/489 (32%), Positives = 234/489 (47%), Gaps = 42/489 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++KI+N+L + F + +N+ MYVCGPTVY H+GN R + FD +YR L++
Sbjct: 1 MNHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLKFL 60
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 61 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 179 LFANTRDLDGQGEKHNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ E W+H L + G++MSKS GN+I +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHG-ESPVRYWMHANMLTMNGQRMSKSTGNYILPMQ 297
Query: 291 LLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
L+ F + + VIR + HYR +D + + + AE S+ + +
Sbjct: 298 LISGENSFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFSRLMEAVKTLNEMST 357
Query: 346 ----------IIDPAVLSALY---NDLNTVSAIQALHKLARESTKNH--------DLLPI 384
ID +D N+ I L ++ + + +L +
Sbjct: 358 DLEHPGPLSYEIDQWKQKCYDALLDDFNSPILIAHLFEMVKWINSDEKISVDELNELKTL 417
Query: 385 FNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
NA +LG++ ++ +N N + ++ L+ R+ K ++ +D IR +L + G
Sbjct: 418 MNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWALSDKIRDELLAMGIQ 477
Query: 442 LEDYKNPDN 450
L+D K +
Sbjct: 478 LKDGKEGTS 486
>gi|119719811|ref|YP_920306.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|187631645|sp|A1RYM3|SYC_THEPD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119524931|gb|ABL78303.1| cysteinyl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 474
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 168/487 (34%), Positives = 238/487 (48%), Gaps = 57/487 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL R + F+ ++ + +YVCGPTVYD++H+G+AR + FDV+ R LR +
Sbjct: 1 MLRVYNTLSRSLEVFEPVEEGRVSIYVCGPTVYDYSHVGHARTYVAFDVIKRYLRLRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+NITDIDDKII RAR E I + T+ +++ +L L P
Sbjct: 61 --VVHVQNITDIDDKIINRARDEGRD------WREIVDEYTKDYLEALQKLRVL-VDVHP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T HI ++I +Q +I GHAY + + FD + P+YG S R ++KM ++
Sbjct: 112 RVTEHISEIIDFVQKLIDSGHAYVAPSGSVYFDVDTYPDYGRLSGR--LDKKMWSQEEFA 169
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF LWK P EP W+SPWG GRPGWHIECS MSS YLG+ FDIHGGG DLIF
Sbjct: 170 SEKKNPYDFALWKARKPGEPYWDSPWGPGRPGWHIECSVMSSKYLGRRFDIHGGGTDLIF 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS + W+H G L + G KMSKS N + + +L RS+
Sbjct: 230 PHHENERAQSEALFGEKPWVKYWMHTGMLQVRGEKMSKSLKNIVPLRDLF-------RSY 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------------- 349
V+RL + HYR + F+ + L +A+ L + +
Sbjct: 283 DPLVVRLWLATAHYRTVLQFSDEVLEQAKSNLQRLRGAVQLLKNLAKEVEPEGRLSDWEL 342
Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNAS 388
+++ +D N A A+ KL P +F
Sbjct: 343 GVFREMLDARREFYASMDDDFNASGAFAAVMKLTGLVYSQVSAKPTYLLVLRALRLFEEF 402
Query: 389 AHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+ L + ++ +V+ R L + K + ADYIR +L S G L D
Sbjct: 403 NRVLGVLDEDLALGAAEVLPVDELLDLIVEVRAKLREQKNYELADYIRSKLSSLGVQLMD 462
Query: 445 YKNPDNG 451
Sbjct: 463 QGEKTRW 469
>gi|255692897|ref|ZP_05416572.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
gi|260621346|gb|EEX44217.1| cysteine--tRNA ligase [Bacteroides finegoldii DSM 17565]
Length = 493
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 163/498 (32%), Positives = 243/498 (48%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLNRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIEKKARLEELE------PMEVVQYYLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + + R
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIELVQKILDAGYAYESEGSVYFDVAKYNKDHHYGRLSG 172
Query: 171 DE----QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
+ + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRELDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL+FPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLVFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I P A+ +DLNT I L + AR
Sbjct: 352 EKITPAATTSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIFNAS-AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F+ I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|73666934|ref|YP_302950.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
gi|109894899|sp|Q3YSF3|SYC_EHRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|72394075|gb|AAZ68352.1| cysteinyl-tRNA synthetase [Ehrlichia canis str. Jake]
Length = 459
Score = 355 bits (911), Expect = 8e-96, Method: Composition-based stats.
Identities = 207/476 (43%), Positives = 268/476 (56%), Gaps = 41/476 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL F ++ NI++YVCGPTVY+F HIGNAR ++++DVL+RLL+ Y V
Sbjct: 3 IYNTLTGIKEPFIPLNVDNIKVYVCGPTVYNFVHIGNARSIVIYDVLFRLLKLLY--PSV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TYVRNITDIDDKII A+ I +TS + F +D L CL PT++P+AT
Sbjct: 61 TYVRNITDIDDKIINVAQSNG------QNICEVTSVYIKAFHEDMKMLNCLEPTYEPKAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
++I MI LIQ +I HGHAY N + F+ S P+YG S+R I E G+RV + KK
Sbjct: 115 DNINVMINLIQKLIDHGHAYVDNATVFFNVESYPSYGQLSKRNIKELIYGSRVDIELGKK 174
Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+P DF+LWK +T ++ W SPWG GRPGWHIECSAMS YL + FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATEVDNKLMSCWPSPWGLGRPGWHIECSAMSYCYLSENFDIHGGGADLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA A WIHNGFL + G KMSKS GN +T+ +LLE+
Sbjct: 235 PHHENEIAQSCCAFPGSYYAKYWIHNGFLTVNGEKMSKSLGNVLTVRQLLES------GV 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
+IR +L THYR+P+D+ L A+ L++ +S + V+
Sbjct: 289 KGELIRYVLLNTHYRKPLDWFNMTLVSAQESLNRMYTALSSVNVDLSLDDDVELSSDVVD 348
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEV---CKEHLNKN 404
L +D+NT AI LH++ E K D L +A+ LGI
Sbjct: 349 CLKDDINTPKAISVLHEMVTEINKTSDVMKKTSLAKTLIKTANFLGILQHSWQDWFRVNE 408
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I+KL+ ER I F AD IR+ L SKG +L D K+ T W +K
Sbjct: 409 NDQEIDKLIDERRIARANNDFKKADDIRQLLLSKGIVLSDNKDGT-----THWYKK 459
>gi|307326970|ref|ZP_07606160.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
gi|306887268|gb|EFN18264.1| cysteinyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
Length = 465
Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats.
Identities = 157/481 (32%), Positives = 247/481 (51%), Gaps = 47/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R +
Sbjct: 1 MTIRLYDTSARQIRDFTPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ I +N + F + L CL T++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSAEQK------RPWWAIGYENERAFNQAYDILGCLPVTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAY A + FD S P Y S + +D + + +
Sbjct: 113 PRATGHVPEMIEMMRELIDRGHAYAAEGNVYFDVRSFPEYLKLSNQDLDGLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGG+DLIF
Sbjct: 172 IGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGRAFDIHGGGVDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DDFAAYWAHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVL 352
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVMEKAGTVEPAAEVPPAFA 342
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
A+ +DL A+ +H R+ L A +LG++ EH
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALTADDKEAAVARLAEVRAMLGVLGLDPLDEHWAG 402
Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++++R K +++AD IR QL+ G ++ED + +
Sbjct: 403 GSDRGEDLHGVVDSLVRLVLEQRQAARTRKDYATADAIRDQLQQSGLVIEDTPSGPRWEM 462
Query: 454 M 454
Sbjct: 463 G 463
>gi|226304178|ref|YP_002764136.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|229494513|ref|ZP_04388276.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
gi|226183293|dbj|BAH31397.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|229318875|gb|EEN84733.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
Length = 464
Score = 355 bits (911), Expect = 9e-96, Method: Composition-based stats.
Identities = 154/477 (32%), Positives = 229/477 (48%), Gaps = 47/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MTLRLYDTGTRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAHGN 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILNKAA------GAGRPWWEWAATFERSFTWAYDQLGVLPPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ +++ +I +GHAY A ++ FD S P YG+ S K+D+ G
Sbjct: 113 PRATGHVTQMVEMMERLIENGHAYAAGGDVYFDVQSYPEYGALSGHKLDDVHQGESA--A 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP W +PWG GRPGWH+ECSAM+ YLG FDIH GG DL+F
Sbjct: 171 EGKRDPRDFTLWKAVKPGEPSWPTPWGPGRPGWHLECSAMAEFYLGAAFDIHCGGRDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ CA + A W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 231 PHHENEIAQAKCAG--DDFAQYWLHNGWVTMSGEKMSKSLGNVLSVPNVL-------KKV 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
+R + HYR ++++ + L E+ G +
Sbjct: 282 RPQELRYYLGSAHYRSNLEYSDEALDESAKSYQGLESFVLRTHKRAGGVELGTWTEGFAA 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
AL NDL+ A+ +H A E A ILG++ EH
Sbjct: 342 ALDNDLSVPIALAEIHGKASEGNSALAAGDLDAARVAAGQVRAMLAILGVDPLDEHWTQS 401
Query: 402 NKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ A+E L + R K ++ AD +R +L G + D +
Sbjct: 402 GGDTETAMEALDVLVRADLDRRQQARTEKNWAVADEVRDRLIKAGIEVTDTPDGPEW 458
>gi|312873891|ref|ZP_07733929.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
gi|311090567|gb|EFQ48973.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2052A-d]
Length = 470
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 176/490 (35%), Positives = 254/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L+ D + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N I+KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|71900828|ref|ZP_00682946.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
gi|71729398|gb|EAO31511.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
Length = 467
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 265/486 (54%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 1 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 61 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSYQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A +W+HNG LN EG KMSKS GN T++EL+
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVA-------KH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T + +AL
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 345
Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
+DLNT A+ L LA E+ T +H+ + A +
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHEAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED +
Sbjct: 406 AWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459
Query: 455 TRWKQK 460
RW ++
Sbjct: 460 VRWMKQ 465
>gi|15837597|ref|NP_298285.1| cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
gi|9105929|gb|AAF83805.1|AE003937_9 cysteinyl-tRNA synthetase [Xylella fastidiosa 9a5c]
Length = 474
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 260/486 (53%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 8 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 67
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 68 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 119
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 120 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 179
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 180 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 239
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A +W+HNG LN EG KMSKS GN T++ L+
Sbjct: 240 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVA-------KH 292
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T +AL
Sbjct: 293 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIEAALD 352
Query: 357 NDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIE---------------- 395
+DLNT A+ L LA E+ H A+ L E
Sbjct: 353 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQTPE 412
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED
Sbjct: 413 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PHG 466
Query: 455 TRWKQK 460
RW ++
Sbjct: 467 VRWMKQ 472
>gi|160897948|ref|YP_001563530.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
gi|229558629|sp|A9BZ45|SYC_DELAS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160363532|gb|ABX35145.1| cysteinyl-tRNA synthetase [Delftia acidovorans SPH-1]
Length = 461
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 175/495 (35%), Positives = 246/495 (49%), Gaps = 78/495 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F I+P ++RMYVCG TVYD H+G+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALEAFSPIEPGHVRMYVCGMTVYDLCHLGHARSMVAFDVVQRWLRASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + +D L PTH+
Sbjct: 60 -HRVTYVRNITDIDDKIIRRAVENG------ETIRSLTDRMIDALHQDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+ + ++ F P YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLSMIGRLQDKGLAYQGTDGDVNFAVRKFPGYGKLSGKSLDELQAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++P DF+LWK + P EP W SPWG GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 QDGKQDPLDFVLWKSAKPAEPEEVKWASPWGVGRPGWHIECSAMGCEMLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + + +W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFSQVWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIID 348
+ + A +R ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSDVHLNDARGALKRLYTALSLVAPAEVAVDWNHPAA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASAHILGIEVCKEH-LNKNI 405
+A+ D T A+ L +LA E K+ + + A A LG+ +
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFELAAEVNRSKSAETAGLLKALAGCLGLLQGDPQAFLQAG 404
Query: 406 SIAIEKLVQERLILLKMKKFSSA----------------------DYIRKQLESKGFILE 443
+ ++ A D IRK L +G +L+
Sbjct: 405 TSEMD-----------------AGAIEAQIAARAAAKAAKDWAEADRIRKALLEQGIVLK 447
Query: 444 DYKNPDNGQRMTRWK 458
D T W+
Sbjct: 448 DS------PAGTTWE 456
>gi|309808476|ref|ZP_07702375.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
gi|308168304|gb|EFO70423.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 01V1-a]
Length = 470
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 248/487 (50%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAH 390
++A+ +D N +A+ +H+L + +L
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
L I K I+KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEIENDDTIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT----- 459
Query: 451 GQRMTRW 457
+ TRW
Sbjct: 460 -PQGTRW 465
>gi|78186099|ref|YP_374142.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
gi|109894917|sp|Q3B6D2|SYC_PELLD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78166001|gb|ABB23099.1| cysteinyl-tRNA synthetase [Chlorobium luteolum DSM 273]
Length = 483
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 160/497 (32%), Positives = 235/497 (47%), Gaps = 61/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ I+N+L R+ F+ + P + +YVCGPTVY AH+G+A+ + FDV+ R LR
Sbjct: 1 MPLVIFNSLGREKQLFEPLHPGVVGIYVCGPTVYGHAHLGHAKSYVSFDVVVRWLRESGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ +DKI +AR E I T+ F+ D
Sbjct: 61 --RVKYVQNITDVGHLSDDADEGEDKIARQARLEKTD------PMEIAQFYTRSFLDDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-RRKID 171
RL L P P AT HIP+ I L+ ++ GHAYE N + F S P YG S R +D
Sbjct: 113 RLGVLRPNISPLATGHIPEQIALVDKLVKRGHAYEVNGNVYFSVESFPGYGKLSGRTDLD 172
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G RV + K NP+DF LWK++ W+SPWG G PGWH+ECSAMS YLG
Sbjct: 173 AVQSGARVGVRSEKHNPSDFALWKKAEEGHLMQWDSPWGMGYPGWHLECSAMSMKYLGDT 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQS A+ + W+HN + + G KM KS N + + E
Sbjct: 233 IDIHGGGMENRFPHHECEIAQSEAAN-EKPYVRYWMHNNMVTVNGTKMGKSLKNAVNLKE 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP- 349
+ ++ +R +L +HYR P+D++ + + L K +T P
Sbjct: 292 IF-------KTVDPLAVRFFILQSHYRSPLDYSDTAVAGSTAGLQKLRETRQRLIEATPG 344
Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
A+ +D NT AI AL ++ D +F+
Sbjct: 345 TGLLDAAPFSLRFREAMDDDFNTPVAIAALFDFSKALNTALDRPDGLNASSLEAARELFS 404
Query: 387 ASA-HILGIEVCKEH--------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+A +LGI + + + L++ R K K F+++D IR L +
Sbjct: 405 TAAVTVLGIMTEDAEGGMHDGGRSAETLDEVMGVLMELRSEARKNKDFATSDLIRDHLLA 464
Query: 438 KGFILEDYKNPDNGQRM 454
G ++D + + +
Sbjct: 465 AGIEIKDTREGASWSKT 481
>gi|309809236|ref|ZP_07703106.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
gi|312871506|ref|ZP_07731599.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
gi|312872554|ref|ZP_07732622.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
gi|329920498|ref|ZP_08277230.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
gi|308170470|gb|EFO72493.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 2503V10-D]
gi|311091916|gb|EFQ50292.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2062A-h1]
gi|311092901|gb|EFQ51252.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 3008A-a]
gi|328936174|gb|EGG32627.1| cysteine--tRNA ligase [Lactobacillus iners SPIN 1401G]
Length = 470
Score = 355 bits (910), Expect = 1e-95, Method: Composition-based stats.
Identities = 175/487 (35%), Positives = 248/487 (50%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAH 390
++A+ +D N +A+ +H+L + +L
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
L I K I+KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMENDDTIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT----- 459
Query: 451 GQRMTRW 457
+ TRW
Sbjct: 460 -PQGTRW 465
>gi|239930483|ref|ZP_04687436.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291438844|ref|ZP_06578234.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
gi|291341739|gb|EFE68695.1| cysteinyl-tRNA synthetase 1 [Streptomyces ghanaensis ATCC 14672]
Length = 466
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 246/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFIPLRPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT++RN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 E--VTFIRNVTDIDDKIIAKSAEQG------RPWWSIGYENERAFTDGYHALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA+ + F +S P+Y S +++ E + +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFAVTSFPDYLKLSNQEL-ENLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTVFDIHGGGLDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + + E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVGEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRTVELAGGPVEPSAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR +L G ++ED
Sbjct: 403 GEGDRGEDLHGVVDSLVRLVLDQREAARARKDWATADAIRDRLGQAGLVIEDSPQGPRWN 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|119358160|ref|YP_912804.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
gi|119355509|gb|ABL66380.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides DSM 266]
Length = 484
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 161/497 (32%), Positives = 232/497 (46%), Gaps = 61/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L +K +F+++ P + MYVCGPTVY AH+G+A+ + FDV+ R LR+
Sbjct: 1 MSLFIYNSLGKKKEQFESLYPGLVTMYVCGPTVYGHAHLGHAKSYVSFDVVARWLRHIGF 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ +DKI +AR E I T+ F +D
Sbjct: 61 --RVKYVQNITDVGHLTDDGDDGEDKIERQARTEKTD------PMEIAQFYTRSFYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P P AT HIP+ I LI+ +I HAY N + F S P YG S R +
Sbjct: 113 RLGVERPNIAPTATGHIPEQIALIEKLIASEHAYVVNGNVYFSVDSFPGYGKLSGRTDQD 172
Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
G RV + K+NP+DF LWK++ P W SPWG G PGWH+ECSAM++ YLG
Sbjct: 173 AVLSGNRVQLRSEKRNPSDFALWKKAEPGHMMQWHSPWGSGFPGWHVECSAMATKYLGPT 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHH+ EIAQS A + W+HN + + G KM KS N + + +
Sbjct: 233 IDIHGGGMENKFPHHDCEIAQSEAASG-KPFVRYWMHNNMVTVNGTKMGKSLKNSVNLKD 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------ 344
L + VIR +L +HYR P+D++ + ++ L K T
Sbjct: 292 LF-------KRVDPVVIRFFILQSHYRSPLDYSETAIRASQTGLEKLHDTMRRLLQALPG 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAH 390
SA+ +D NT AI L ++ D L
Sbjct: 345 SGELNISAFIDRFESAMNDDFNTPIAISVLFDFSKSLNSALDQECGLSETALDNAKRFLG 404
Query: 391 -----ILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LGI + E+ K + I L+ R + K + +D IR +L
Sbjct: 405 MYGTTLLGIIPPEAQPLTTGMENGEKTLDEVISILLDMRKEAREQKNYPLSDTIRDRLLE 464
Query: 438 KGFILEDYKNPDNGQRM 454
G ++D K+ + ++
Sbjct: 465 AGIEVKDTKDGASWSKV 481
>gi|295086168|emb|CBK67691.1| cysteinyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
Length = 493
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLAREST---------KNHD 380
I P A+ +DLNT I L + AR D
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
L + I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|256397251|ref|YP_003118815.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
gi|256363477|gb|ACU76974.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
Length = 470
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 157/483 (32%), Positives = 233/483 (48%), Gaps = 51/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R EF + P + +Y+CG TV HIG+ R + FD+ R L Y
Sbjct: 1 MTLRLYDTAARATREFVPVTPGKVSIYLCGATVQAPPHIGHIRSGVSFDIARRWLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+VRN+TDIDDKII +A ++ + N F + L C P+ +
Sbjct: 61 --AVTFVRNVTDIDDKIIRKAAEQKVET------WRVAQANEYAFQQAYRLLGCEDPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+M+ ++ +I GHAY A ++ F S+P YG+ + +D+ +
Sbjct: 113 PRATGHIPEMVAMMHKLIYDGHAYAAGGDVYFRVRSLPAYGALAHFSVDDLEEQPAEDVA 172
Query: 183 Y--HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
HK++P DF LWK S P EP W++PWG GRPGWH+ECSAM+ YLG FDIHGGG+DL
Sbjct: 173 PTTHKEDPHDFALWKASKPGEPFWDTPWGPGRPGWHLECSAMAHRYLGTNFDIHGGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENE AQS +K N W+HNG++ L+ KMSKS GN + + EL +
Sbjct: 233 IFPHHENEQAQSHAFG--DKFTNYWMHNGWVTLKNEKMSKSLGNSVLVTEL-------AK 283
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIIDPA 350
+ V+R + HYR I++T L EA+ S+ T + A
Sbjct: 284 QYRPVVMRYYLGTPHYRSMIEYTEDSLREADAAYSRIEGFVTRALETVGPTEAAARVPAA 343
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHL 401
++ +D A+ L+ RE L ILG+ E
Sbjct: 344 FAESMDDDFGVPGAVAVLYTTVREGNTALAGGDKEGVATHLASVLRMLDILGLNPLAEPW 403
Query: 402 NK-------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ ++ +++R + K ++++D IR +L G +ED +
Sbjct: 404 AGADGAAGSGTDLRPVVDALVKVALEQRQAARERKDYAASDAIRDRLSQAGVTVEDTPSG 463
Query: 449 DNG 451
Sbjct: 464 PRW 466
>gi|145296638|ref|YP_001139459.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
gi|166200145|sp|A4QH41|SYC_CORGB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|140846558|dbj|BAF55557.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 460
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 143/475 (30%), Positives = 228/475 (48%), Gaps = 42/475 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R + +F+ + P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLRIFDTGTRTLRDFKPVQPGHASVYLCGATPQSSPHIGHVRSAVAFDILRRWLMAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKASENG------RPWWEWVSTYEREFTWTYNTLGVLPPSTE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QMI +Q +I +G AY + + FD ++ + ++ +
Sbjct: 113 PRATGHVTQMIEYMQRLIDNGFAYAVDGSVYFDVAAWSKAEGSDYGSLSGNRVEDMEQGE 172
Query: 183 YHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ P DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG+ FDIH GGLD
Sbjct: 173 PDNFGKRGPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATYYLGEQFDIHCGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A +K AN W+HN ++ + G KMSKS GN + + E+L
Sbjct: 233 LQFPHHENEIAQAHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLAVPEML------- 283
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSA 354
+ +R + HYR ++++ L+EA + + G ++ P +A
Sbjct: 284 KQVRPVELRYYLGSAHYRSVLEYSESALSEAAVGYRRIESFLERVGDVEVGEWTPGFEAA 343
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKE------ 399
+ D+ A+ +H RE D L A +LG + +
Sbjct: 344 MDEDIAVPKALAEIHNAVREGNAALDKGDREAAKKLASSVRAMTGVLGFDPVEWGSDAGA 403
Query: 400 --HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+K + + I ++ R K ++ AD +R +L G + D + +
Sbjct: 404 DGKADKALDVLISSELERRATARAEKNWTVADEVRDRLADAGIEVVDTADGATWK 458
>gi|58617054|ref|YP_196253.1| cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
gi|81311364|sp|Q5FHI9|SYC_EHRRG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|58416666|emb|CAI27779.1| Cysteinyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
Length = 457
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 200/473 (42%), Positives = 273/473 (57%), Gaps = 39/473 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYNTL R F +D +N+++YVCGPTVYDFAHIGN+R ++++D+L+RLL Y V
Sbjct: 3 IYNTLTRSKELFVPLDVNNVKIYVCGPTVYDFAHIGNSRSIVIYDILFRLLNVLY--PKV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TY+RNITDIDDKII A+ N I +T++ + F +D RL CL PT++PRAT
Sbjct: 61 TYIRNITDIDDKIINVAQNN------NQNIYDVTARYIKAFNEDMGRLNCLKPTYEPRAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+I M+ LI+ +I +GHAY +N + FD S P YG S R I E G+R+ + KK
Sbjct: 115 ENIDVMLALIEKLINYGHAYIRDNTVFFDIQSYPAYGKLSGRNIMELIYGSRIDIEVGKK 174
Query: 187 NPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+P DF+LWK +T ++ W SPWG GRPGWHIECSAMS +YLG+ FDIHGGG DL F
Sbjct: 175 HPGDFVLWKPATDIDSKLMSCWPSPWGVGRPGWHIECSAMSYNYLGENFDIHGGGADLQF 234
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA A WIHNGFL + KMSKS GNF+T+ +LL++
Sbjct: 235 PHHENELAQSCCAFPNSYYAKYWIHNGFLTVNHEKMSKSLGNFLTVRQLLDS------GI 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSA 354
VIR L THYR+P+D+ ++ A+ L++ + ++S
Sbjct: 289 RGEVIRYIFLSTHYRKPLDWNDNVVSSAQESLNRIYMALNVTDERLLLDDVEVSDEIISC 348
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIE--VCKEHLNKNIS 406
L +D+NT AI LH++ K D+ + + SA+ LGI +E +
Sbjct: 349 LKDDMNTPKAIAVLHEMVTRINKASDIDKKVYFIKVLIKSANFLGILHHSWQEWFKVDND 408
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I +L+ ER + F AD IR+ L KG +L D K+ T W +
Sbjct: 409 QDIIQLIHERKMAKTNGDFIKADRIRQILLDKGIVLSDNKDGT-----TLWYR 456
>gi|332992532|gb|AEF02587.1| cysteinyl-tRNA synthetase [Alteromonas sp. SN2]
Length = 460
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 162/496 (32%), Positives = 245/496 (49%), Gaps = 77/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT R +F + + +YVCG TVY+ +H+G+AR + FD+L R LR+ +
Sbjct: 1 MLHLYNTRTRDKAKFVPLQEGKVGLYVCGITVYNLSHMGHARTYLSFDILVRYLRHLGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + + +T + +D + L P +P
Sbjct: 61 --VKYVRNITDIDDKIIARANENG------ETFEALTKRTIGMMHEDFAAINLLEPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ H+ +I +I+ ++ G AY+ +N +++FD S P YG S++ +D+ + G+RV
Sbjct: 113 TVSGHMDDIIDIIKILMDKGFAYQASNGDVLFDVSKFPEYGKLSKQDLDQLQSGSRVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF+LWK + EP W+SPWG GRPGWHIECSAM+ +LG FDIHGGG DL F
Sbjct: 173 LDKNDPLDFVLWKPAKAGEPAWQSPWGEGRPGWHIECSAMNKKHLGAHFDIHGGGSDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQSCCA + N+W+H G + ++ KMSKS GNF T+ ++L +
Sbjct: 233 PHHENEVAQSCCAFD-KPYVNVWMHAGMVQVDDEKMSKSLGNFFTLRDVL-------QEH 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------- 354
A +R ++ HYR + ++ +T+A+ L + + + LS
Sbjct: 285 DAETLRFFLMSAHYRSQLSYSQDNITQAKAALERLYTALRGVTVDESTDLSYGGYLARFE 344
Query: 355 --LYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEHL---- 401
+ +DLN A L +ARE +N D L + ILG+
Sbjct: 345 AAMNDDLNVPEAFSVLFDVAREINRNKDNAEEASKLAAVLKGLGAILGMLQSDPDAYLKG 404
Query: 402 ---NKNISIAIEKLVQERL---------------ILLKMKKFSSADYIRKQLESKGFILE 443
N + + IE L+++R L +K +LE
Sbjct: 405 GSENDDEAAEIEALIKQRNDARAAKDWAAADAARD---------------ALNAKNIVLE 449
Query: 444 DYKNPDNGQRMTRWKQ 459
D G T W++
Sbjct: 450 D------GPAGTTWRR 459
>gi|194366504|ref|YP_002029114.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
gi|194349308|gb|ACF52431.1| cysteinyl-tRNA synthetase [Stenotrophomonas maltophilia R551-3]
Length = 458
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 179/481 (37%), Positives = 253/481 (52%), Gaps = 48/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++N L R++ F +DP+ +YVCGPTVY++ HIGNAR +VF VL LLR +G
Sbjct: 1 MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
Y RNITD+DDKI AR++ IS IT + + +D L P +
Sbjct: 61 GL--RYARNITDVDDKINNAAREQGV------PISTITDRFAAAYREDMAALGVAPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T HIPQ+I +I +I GHAY A ++F SS YG SRR +E G RV
Sbjct: 113 PEVTAHIPQIITMIGQLIASGHAYPAEGHVLFAVSSFEGYGKLSRRDPEEMLAGARVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA A W+HNG LN G KMSKS GN +++L+ R
Sbjct: 233 PHHENELAQSECAHGGRIFARFWLHNGMLNFGGAKMSKSVGNIERVHDLV-------RQH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------IIDPAVLSALY 356
P +RLA+L HYR+P++++ + ++ L + T I V + L
Sbjct: 286 PPEALRLALLSAHYRQPLEWSDALIEQSVRTLDRLYGTLRELASVVAVVAIPATVEATLD 345
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------------AHILGIEVCKE 399
+DLNT A+ + ++A ++ + D A G
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPTEQARLKGELLGAGLALGLLQADPAQWFG----TA 401
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ I+ L+ R + + F+ +D IR QL ++G +LED + RW +
Sbjct: 402 AGDDGDDARIQGLIDARAAAKQARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSR 455
Query: 460 K 460
K
Sbjct: 456 K 456
>gi|297618406|ref|YP_003703565.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297146243|gb|ADI03000.1| cysteinyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 539
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 176/547 (32%), Positives = 253/547 (46%), Gaps = 115/547 (21%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNTL R+ ++P+ ++MYVCGPT Y++ H+GNARP++VFD++ R L+Y E
Sbjct: 1 MIQVYNTLSRRKERLNTLEPNKVKMYVCGPTTYNYIHLGNARPLVVFDIIRRYLQYKGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV+N TD+DDKII+R+++E S + + K ++ +D L + P
Sbjct: 61 --VTYVQNFTDVDDKIIQRSQEEGKSA------AEVAGKYIDEYFRDADALGVKRADYHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++HIP +I +I+ ++ G+AY ++ + + YG S R ++E G RV
Sbjct: 113 RVSDHIPDIIRVIETLVEKGYAYRIGGDVYYRVRAFERYGQLSGRSLEEMLAGARVEVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG GRPGWHIECS M+ YLG+ DIHGGG DL+FP
Sbjct: 173 RKEDPMDFALWKEAKPGEPAWESPWGPGRPGWHIECSVMAMKYLGETLDIHGGGADLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS W+HNGF+ + KMSKS GNF + E+L +P
Sbjct: 233 HHENEIAQSEAYSGR-PFVRYWLHNGFITVNKEKMSKSLGNFFILREILS-------QYP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A V+R + THYR P+DF +L EA L++ T +
Sbjct: 285 AEVVRFYLGSTHYRSPLDFDNTKLEEAGRALARLNNTLRRLNEVVKNEEVEANDETRDAD 344
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNAS 388
A+ +D NT AI L +ARE D +
Sbjct: 345 KGFVSRLHELKEKFEVAMDDDFNTAQAIGYLFDMAREINAYLDFWEGEGSSKAPAAIKEA 404
Query: 389 --------AHILG-----------------IEVCKEHLNKNIS----------------- 406
+ILG IE+ E + +
Sbjct: 405 YRVFTLLGGNILGFLSEDFEHKGHGISDKVIEILFEMKEEALESGSLERVERILSCLQSA 464
Query: 407 -IAIEK---------------------LVQERLILLKMKKFSSADYIRKQLESKGFILED 444
I IE L+ R + K F++AD IR L+ G ++ED
Sbjct: 465 GIEIEDTFSGSTWRANRPVNVSDLIEPLLSWRSEARRNKDFTTADVIRDNLKKIGVVVED 524
Query: 445 YKNPDNG 451
+
Sbjct: 525 TREGARW 531
>gi|213965076|ref|ZP_03393274.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
gi|213952190|gb|EEB63574.1| cysteinyl-tRNA synthetase [Corynebacterium amycolatum SK46]
Length = 471
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 142/477 (29%), Positives = 228/477 (47%), Gaps = 48/477 (10%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T R++ +F+ + + +Y+CG T HIG+ R + FD+L R L +
Sbjct: 8 QIFDTATRQLKDFEPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLIAKGYD-- 65
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +VRN+TDIDDKI+ +A + S+ ++F +L L P+ +PRA
Sbjct: 66 VVFVRNVTDIDDKILNKAAEHG------RPWWEWVSRFEREFTWAYNQLGVLPPSVEPRA 119
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH- 184
T H+ QM+ +Q ++ +G AY + + FD + + ++ + +
Sbjct: 120 TGHVTQMVEYMQRLMDNGFAYAVDGSVYFDVDAWSKAEGSDYGSLSGNRVDEMEQGETNT 179
Query: 185 --KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ DF LWK + P EP W +PWG GRPGWH+ECSAM+++YLG FDIH GGLDL F
Sbjct: 180 PGKRGAHDFALWKAAKPGEPSWPTPWGNGRPGWHLECSAMATYYLGSEFDIHCGGLDLQF 239
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A A W+HN ++ + G KMSKS GN +++ +L +
Sbjct: 240 PHHENEIAQSHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSVPHILTMVR------ 291
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
+R + HYR ++++ + L EA + + G PA +
Sbjct: 292 -PVELRYYLGSAHYRSVLEYSEEALQEAAVGYRRIEAFMHRAVDKLGDIEIGEWTPAFEA 350
Query: 354 ALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLNKN 404
AL +DL A+ +H R K ++ A A +LG + E +
Sbjct: 351 ALDDDLAVPRALAEIHNAVRGGNQALADGDETKAKEIAGAVRAMAAVLGFDPLNEQWATS 410
Query: 405 IS----------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
S + +E ++ER K +++AD +R +L+ G + D +
Sbjct: 411 DSGSDAAMHALGVLVEHQLEERTRARAEKDWATADAVRDRLKEAGIEVTDTADGPAW 467
>gi|300859175|ref|YP_003784158.1| cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
FRC41]
gi|300686629|gb|ADK29551.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis
FRC41]
gi|302206865|gb|ADL11207.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
gi|302331429|gb|ADL21623.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
gi|308277117|gb|ADO27016.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
Length = 465
Score = 354 bits (909), Expect = 1e-95, Method: Composition-based stats.
Identities = 143/477 (29%), Positives = 220/477 (46%), Gaps = 44/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R + +F + + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLRIFDTGTRSLRDFTPLREGHASIYLCGATPQAQPHIGHVRSGVAFDILRRWLLAKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILRKAEEHG------RPWWEWVSTYEREFTWAYDQLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ +Q +I +G+AY+A + FD S+ + K+ +
Sbjct: 113 PRATGHVTQMVDYMQRLIDNGYAYDAEGSVYFDVSAWTAATGSDYGSLSGNKVEEMEQGE 172
Query: 183 YHKKNP---ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FDIH GGLD
Sbjct: 173 TDNHGKRGSHDFALWKAAKPGEPSWPTPWGEGRPGWHLECSAMATWYLGGEFDIHCGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A A W+HN ++ + G KMSKS GN +++ +LE +
Sbjct: 233 LQFPHHENEIAQSHAAGDG--FAQYWMHNHWVTMSGEKMSKSLGNVLSVPNILEKVR--- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSA 354
+R + HYR ++++ L EA + G P A
Sbjct: 288 ----PVELRYYLGSAHYRSMLEYSDNALLEAAAGYRRIEAFLAKVGPVEIGEWTPEFAKA 343
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN- 404
L +DL A+ +H L R + A +LG++ EH
Sbjct: 344 LDDDLAVPKALAEIHGLVRAGNTALSSGDTTEAQRIASSIRAMTSVLGVDPQSEHWATES 403
Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ I + ++ R + K +++AD +R +L + G + D +
Sbjct: 404 DTSEDAMAALDILVRAELERRTAAREAKDWATADQVRDRLAAAGITVTDTADGPTWA 460
>gi|28198209|ref|NP_778523.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
gi|28056279|gb|AAO28172.1| cysteinyl-tRNA synthetase [Xylella fastidiosa Temecula1]
Length = 474
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 264/486 (54%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 8 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 67
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 68 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 119
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 120 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIA 179
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 180 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 239
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A +W+HNG LN EG KMSKS GN T++EL+
Sbjct: 240 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVA-------KH 292
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T + +AL
Sbjct: 293 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 352
Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
+DLNT A+ L LA E+ T +H + A +
Sbjct: 353 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 412
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED +
Sbjct: 413 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 466
Query: 455 TRWKQK 460
RW ++
Sbjct: 467 VRWMKQ 472
>gi|68736678|sp|Q9PEN3|SYC_XYLFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 467
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 260/486 (53%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 1 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 61 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A +W+HNG LN EG KMSKS GN T++ L+
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHGLVA-------KH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T +AL
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPAHPFIPGNIEAALD 345
Query: 357 NDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIE---------------- 395
+DLNT A+ L LA E+ H A+ L E
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTAALTRLKAELLGAGLALGLLQQTPE 405
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED
Sbjct: 406 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PHG 459
Query: 455 TRWKQK 460
RW ++
Sbjct: 460 VRWMKQ 465
>gi|325958959|ref|YP_004290425.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
gi|325330391|gb|ADZ09453.1| cysteinyl-tRNA synthetase [Methanobacterium sp. AL-21]
Length = 467
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 167/482 (34%), Positives = 249/482 (51%), Gaps = 55/482 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNT+ R+ F+ I+ + ++++VCGPTVYD++HIG+AR I FDV+ R ++Y
Sbjct: 1 MIKLYNTMTRRKEIFEPIEGNRVKLFVCGPTVYDYSHIGHARTYISFDVIVRYMKYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+NITD+DDKI++RA + + + + + +++++D L
Sbjct: 60 -SVFYVQNITDLDDKILKRADE------LETSPLELARRYEEKYLRDMELLGVEHVNLYA 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HIP+++ I ++ G+AYE + + FD S ++G S R +++ R+
Sbjct: 113 RATEHIPEIVRQIGVLVDKGYAYETDKGVYFDESKFEDFGKLSNRNLEDLN-VHRIGPDS 171
Query: 184 HKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK+ E W+SPWG GRPGWHIE +A++ Y G +DIHGGGLD
Sbjct: 172 SKRNPGDFALWKKRERISEEQEMIWDSPWGTGRPGWHIEDTAITETYFGPQYDIHGGGLD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHE EIAQ + I+ W+H GFLN++G KMSKS GNFITINELLE
Sbjct: 232 LIFPHHEAEIAQMEASSGIKPMVRYWMHTGFLNVKGEKMSKSLGNFITINELLE------ 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------------------- 338
+ V R +L THYR PIDF+ + L ++ L++
Sbjct: 286 -EYSPEVFRFFVLSTHYRSPIDFSSEILHQSSQGLNRIYKLIEKINSELDSDTNISLDND 344
Query: 339 -QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFN 386
+ A+ ND NT +AI + L R+ ++ L I
Sbjct: 345 SDYIQKLAAVREEFFEAMDNDFNTPAAISTIFDLIRDVNRDIHESNISKNSLTKLKAIII 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQE--RLILLKMKKFSSADYIRKQLESKGFILED 444
++LG++ E N+ + + R L + K + +D IR +L LED
Sbjct: 405 EFGYVLGLDFSMEPENEENLEVELLDLLKYVREKLRQNKNWELSDQIRDRLNELNITLED 464
Query: 445 YK 446
K
Sbjct: 465 KK 466
>gi|91206096|ref|YP_538451.1| cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
gi|157826471|ref|YP_001495535.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
gi|109894934|sp|Q1RH02|SYC_RICBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166225304|sp|A8GUK2|SYC_RICB8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91069640|gb|ABE05362.1| Cysteinyl-tRNA synthetase [Rickettsia bellii RML369-C]
gi|157801775|gb|ABV78498.1| cysteinyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
Length = 458
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 195/475 (41%), Positives = 277/475 (58%), Gaps = 34/475 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+I ++NTL + F+ D +N++MYVCGPTVYD HIGN+R ++V+D+LYR+L +
Sbjct: 1 MQIYLFNTLTQNKELFEPEDQTNVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRILVDIFE 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
K V YVRNITD+DDKIIERA + +I+ +T K T++F + L CL PT +
Sbjct: 61 AKSVKYVRNITDVDDKIIERAA------NLGISINELTDKVTKEFHTNMKYLFCLPPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI MI +I+ +I GHAY A++ + FD PNY S RK+++ RV
Sbjct: 115 PKATQHIDVMIEIIEKLIKSGHAYIADDHVYFDVLLAPNYTELSNRKLEDMFESVRVENS 174
Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KK+P DF+LWK + P E ++SPWG GRPGWHIECSAMS YLGK FDIHGGG D
Sbjct: 175 KTKKHPQDFVLWKPAKPDEDVHMNFKSPWGLGRPGWHIECSAMSYKYLGKNFDIHGGGAD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 LIFPHHTNEIAQSKCAFSNSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSA 354
+ ++RL +L HYR P+D+ + + +A+ L W + + I + + +
Sbjct: 289 KQIKGEIVRLFLLTAHYRRPLDYNDKAIEDAKKTLDYWYRAIQNINIQKIDTLPSDFMQS 348
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGI--EVCKEHLNKNIS 406
L++D+N+ AI+ ++ A+ + A A+ +G+ E E NK++
Sbjct: 349 LFDDMNSPLAIKIINDYAKAIFTATNEEEKQFNASNLIACANFIGLMNETPHEWFNKDVD 408
Query: 407 I-AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I L+ ERL K K + AD IR +L ++ ILED N T W+++
Sbjct: 409 ENYINNLINERLEAKKQKNWGLADQIRNKLLNEKIILEDKPNGT-----TIWRKE 458
>gi|302338662|ref|YP_003803868.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301635847|gb|ADK81274.1| cysteinyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 474
Score = 354 bits (909), Expect = 2e-95, Method: Composition-based stats.
Identities = 160/482 (33%), Positives = 239/482 (49%), Gaps = 39/482 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
KI +YNT+ R++ EF+ I+ ++MY CGPTVY+FAHIGN R + DVL R+ Y
Sbjct: 1 MKILLYNTMGREVQEFKPIEDGLVKMYTCGPTVYNFAHIGNLRTYVFEDVLRRVFEYAGF 60
Query: 63 EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
V +V NITD+ DD + E S ++ I T F +DT RL +
Sbjct: 61 --KVEHVMNITDVGHLTDDADEGEDKMEKSSRESGKSVWEIAKYYTDAFFRDTDRLNIIR 118
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
PT PRAT HI MI LI+ + GH Y+A + F + P+YG + + + G R
Sbjct: 119 PTVAPRATEHIDDMIALIKRLEEGGHTYQAGGNVYFSIDTFPDYGRLALLDRQDLQAGAR 178
Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ +K+NP DF+LW ++ E W+SPWG+G PGWHIECSAMS YLG+ FDIH
Sbjct: 179 IEVDSNKRNPHDFVLWFTNSKFENHAMLWDSPWGKGYPGWHIECSAMSIRYLGEQFDIHC 238
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+D I HH NEIAQ+ A ++ W+H FL + KM+KS GNF+T+ L++
Sbjct: 239 GGVDHIPVHHTNEIAQAEAATG-KQWVQYWVHGEFLLMNKGKMAKSAGNFLTLQSLVD-- 295
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGI 346
+ + R L HYR + F+ + L A+ + K
Sbjct: 296 ----KGYHPLDYRYFCLGGHYRSQLQFSFESLDAAKSARERLVSRIAVLREELGDCWKEA 351
Query: 347 ID-----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
I +A+ D+N A+ L +L + + + L + +A +LG+
Sbjct: 352 IALPPSAAGSKFLERFEAAVGQDMNMPKALAELWQLLKSELQPGEKLSVVSAMDRVLGLN 411
Query: 396 VC---KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + + IE+L+++R K F AD IR +L ++G ++D N
Sbjct: 412 LLALPQHATDSSEDREIEELIEQRNAARSRKDFHLADEIRDKLSARGISIKDTPNGTKWS 471
Query: 453 RM 454
R
Sbjct: 472 RT 473
>gi|325913157|ref|ZP_08175527.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
gi|325477578|gb|EGC80720.1| cysteine--tRNA ligase [Lactobacillus iners UPII 60-B]
Length = 470
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 175/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTQYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L D + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N ++KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|172041351|ref|YP_001801065.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
gi|171852655|emb|CAQ05631.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 487
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 161/502 (32%), Positives = 238/502 (47%), Gaps = 70/502 (13%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++IY+T RK+ EF + + +Y+CG TV HIG+ R + FDVL R L
Sbjct: 1 MPLQLRIYDTASRKVREFTPLREGKVSIYLCGATVQSIPHIGHVRSGVAFDVLRRWLLAQ 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V +VRN+TDIDDKI+ +A + N + + + F +L L P+
Sbjct: 61 GYD--VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFTWAYDQLGVLPPS 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT H+PQMI +Q II +GH Y A+ + +SI NYG S +K+DE G
Sbjct: 113 VEPRATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPASIENYGFLSGQKLDELDQGESAG 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KKNP DF +WK + P EP W++PWGRGRPGWHIECSAM+++YLG FDIH GGLDL
Sbjct: 173 TG--KKNPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATNYLGGEFDIHAGGLDL 230
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE AQ+ A A W+HNG++ + G KMSKS GN +++ +LE +
Sbjct: 231 QFPHHENEAAQATAAGDG--FAQYWMHNGWVTMSGEKMSKSLGNVLSVPNILEKVR---- 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------- 344
+R + HYR ++++ L EA + +
Sbjct: 285 ---PVELRYYLGSGHYRSMLEYSESALAEAAAGYRRIEKFLLRAAAYLAAIEDDAPASAG 341
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI------- 384
G A + +DL A+ +H RE K ++
Sbjct: 342 DQAARGPEQLVAVGQWPEAFAEKMNDDLAVPQALAVIHDAVREGNKALEVKDTETVMRVA 401
Query: 385 --FNASAHILGIEVCKEHLNK-------------NISIAIEKLVQERLILLKMKKFSSAD 429
A +LG++ EH + + ++ +Q R K ++ AD
Sbjct: 402 GQVRAMMSVLGVDPFDEHWLEQTMAGQGSSAAMTALDSLVQDDLQRRAEARAEKNWAVAD 461
Query: 430 YIRKQLESKGFILEDYKNPDNG 451
+R +L + G + D +
Sbjct: 462 EVRDRLTAAGIEVTDTADGAQW 483
>gi|91204303|emb|CAJ71956.1| strongly similar to cysteinyl-tRNA synthetase [Candidatus Kuenenia
stuttgartiensis]
Length = 492
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 175/514 (34%), Positives = 255/514 (49%), Gaps = 78/514 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K YN++ +K F+ + ++ MYVCGPTVYD HIG+A+ + +DV+ R LRY
Sbjct: 1 MTLKFYNSITKKKEVFKPLVEGHVNMYVCGPTVYDHPHIGHAKSYVSYDVIVRYLRYLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV+NITD+ DDKI+ RA++E +++ T+ + +D
Sbjct: 61 --KVCYVQNITDVGHLTDNADAGDDKILARAQRERIE------PAVLVEIYTRSYFEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P PRAT HIP+ I LI+ +I G+AY +N + F+ S YG S RK ++
Sbjct: 113 ALNNLRPDISPRATAHIPEQIELIEKLISKGYAYVSNGSVYFEVSKYREYGKLSGRKQED 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ G R+ K+NP DF LWK++ P W+SPWG G PGWH+ECSAMS YLG+
Sbjct: 173 LEAGARIEINLEKRNPNDFALWKKAEPAHIMRWKSPWGEGFPGWHLECSAMSMKYLGESL 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGG++ +FPHHE EIAQS A+ + WIHN + + G+KM KS GNF+T+ +
Sbjct: 233 DIHGGGIENMFPHHECEIAQSEAANDM-TFVRYWIHNNMVTVNGQKMGKSLGNFVTLKDA 291
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
+ + IR +L THYR P+DF+ + L A+ L + T
Sbjct: 292 F-------KKYHPLTIRFFILSTHYRSPLDFSNEALDAADKGLKRLFNTIKRVRRQIDEA 344
Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
A L+A+ D+NT AI AL L++E D +
Sbjct: 345 ANGETTVLVYEKLEEHKKAFLNAMDEDINTSGAIAALFDLSKEVNALLDSGEEVSKKCME 404
Query: 390 -----------HILGIEVCKEHLNKNISIA------------IEKLVQERLILLKMKKFS 426
ILGI ++ + +I + L+ R L K K F
Sbjct: 405 DINSLYQELGDGILGIVPVRKEVKADIEDDFSEGDKSVLKEVMGVLIDTRNQLRKEKLFQ 464
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+D+IR +L G LED ++ +T WK++
Sbjct: 465 LSDFIRNKLTEIGITLEDTQD------VTLWKKR 492
>gi|298480481|ref|ZP_06998678.1| cysteine--tRNA ligase [Bacteroides sp. D22]
gi|298273302|gb|EFI14866.1| cysteine--tRNA ligase [Bacteroides sp. D22]
Length = 493
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLAREST---------KNHD 380
I P A+ +DLNT I L + AR D
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
L + I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|254523152|ref|ZP_05135207.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
gi|219720743|gb|EED39268.1| cysteinyl-tRNA synthetase [Stenotrophomonas sp. SKA14]
Length = 458
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 182/481 (37%), Positives = 259/481 (53%), Gaps = 48/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++N L R++ F +DP+ +YVCGPTVY++ HIGNAR +VF VL LLR +G
Sbjct: 1 MTLRLHNNLTRQLEPFTPLDPACPTLYVCGPTVYNYVHIGNARGPVVFGVLADLLRRRFG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI AR++ IS IT K + +D L + P +
Sbjct: 61 --ALRYARNITDVDDKINTAAREQGV------PISTITDKFAAAYREDMAALGVVPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T H+PQ+I +I+ +I GHAY A ++F +S YG SRR DE G RV
Sbjct: 113 PEVTAHMPQIITMIEQLIASGHAYAAEGHVLFAVASFDGYGKLSRRDPDEMLAGARVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P DF+LWK S+ PGWESPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPGDFVLWKPSSDDLPGWESPWGRGRPGWHIECSAMAAAHLGETIDIHAGGVDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + A W+HNG LN G KMSKS GN +++L+ R
Sbjct: 233 PHHENEIAQSECAHGGKIFARFWLHNGMLNFGGAKMSKSLGNIERVHDLV-------RQH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------GIIDPAVLSALY 356
P +RLA+L HYR+P+D++ + ++ L + T +I V + L
Sbjct: 286 PPEALRLALLSAHYRQPLDWSDGLIEQSVRTLDRLYGTLRELASIEASAVIPATVEATLD 345
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNAS-----------------AHILGIEVCKE 399
+DLNT A+ + ++A ++ + D A G
Sbjct: 346 DDLNTPQALAEVARIAADARRATDPAEQARLKGELLGAGLALGLLQADPAQWFG----TA 401
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ I+ L+ ER + + F+ +D IR QL ++G +LED + RW +
Sbjct: 402 AGDDGDDARIQGLIDERAAAKQARDFARSDAIRDQLAAEGIVLEDT------PQGVRWSR 455
Query: 460 K 460
K
Sbjct: 456 K 456
>gi|309806486|ref|ZP_07700490.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
gi|308167085|gb|EFO69260.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 03V1-b]
Length = 470
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 176/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L D + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N I+KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|259500940|ref|ZP_05743842.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
gi|302190608|ref|ZP_07266862.1| cysteinyl-tRNA synthetase [Lactobacillus iners AB-1]
gi|259167634|gb|EEW52129.1| cysteine-tRNA ligase [Lactobacillus iners DSM 13335]
Length = 470
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 177/490 (36%), Positives = 254/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLKQAEAVLKRYKNILRNIKERLSEKNDVSDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L HD + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLHDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N I+KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTIQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|111021434|ref|YP_704406.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|123340129|sp|Q0S888|SYC_RHOSR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110820964|gb|ABG96248.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
Length = 464
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 156/477 (32%), Positives = 234/477 (49%), Gaps = 47/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T R + +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MTLRLFDTETRALRDFVPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAHDY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDI+DKI+ +A + + + F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIEDKILNKAAEAG------RPWWEWAATFERSFTWAYQQLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QM+ ++Q +I +GHAY A ++ FD S P YGS S K+D+ G
Sbjct: 113 PRATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESA--G 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GGLDL+F
Sbjct: 171 ECKRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ CA + A W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 231 PHHENEIAQAKCAG--DDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVL-------KKV 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGIIDPAVLS 353
+R + HYR ++++ L E + G+ A
Sbjct: 282 RPQELRYYLGSAHYRSMLEYSDTALDEGAAAFRRIESFVLRTQERAGEVPVGLWTEAFAR 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
AL +DL +A+ +H RE D + A ILG++ EH +
Sbjct: 342 ALDDDLAVPAALAEVHGKVREGNIALDGGDLEGARGIASQVRAMLGILGVDPLDEHWTQE 401
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + ++ R K ++ AD +R +L G + D N
Sbjct: 402 TADASAATDALDVLVRAELERRQSARAEKNWAVADEVRDRLIRAGIEVTDTPNGPEW 458
>gi|222148112|ref|YP_002549069.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
gi|221735100|gb|ACM36063.1| cysteinyl-tRNA synthetase [Agrobacterium vitis S4]
Length = 588
Score = 354 bits (908), Expect = 2e-95, Method: Composition-based stats.
Identities = 219/416 (52%), Positives = 279/416 (67%), Gaps = 15/416 (3%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +K+YNTL R +F IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVLYRLLR+
Sbjct: 43 MAEGLKLYNTLTRSKVDFTPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLYRLLRHI 102
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YGE VTY RNITD+DDKI RA ++ P +P+N+AI+ +T K QF D L L PT
Sbjct: 103 YGENHVTYARNITDVDDKINARALRDFPDLPLNEAIAKVTQKTADQFHADVAALGNLPPT 162
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT++I QMI +I+ +I GHAY A E++FDT S+ YG S+R +DEQ+ G R+
Sbjct: 163 IEPRATDNIQQMIDIIKTLIAKGHAYVAEGEVLFDTRSMAAYGQLSKRNLDEQQAGARIA 222
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ HKK+P DF+LWK S+ EPGWESPWGRGRPGWHIECSAMS YLG+VFDIHGGGLDL
Sbjct: 223 VEAHKKHPGDFVLWKLSSHNEPGWESPWGRGRPGWHIECSAMSKRYLGEVFDIHGGGLDL 282
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQSCCA+ AN+W+HNGF+ +EGRKMSKS+GNF+TI++LL + FGGR
Sbjct: 283 IFPHHENEIAQSCCANDTSVMANVWMHNGFVQVEGRKMSKSDGNFLTIDQLLRSDSFGGR 342
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------SKG 345
W V R AML THYR+PID+T+ +L ++ + + +
Sbjct: 343 PWHGGVFRFAMLKTHYRQPIDWTLDKLQQSRNEIFSFIASCNAGLIISQINAKRSLGKAT 402
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
D + AL +DLNT A+ L L + + + + LGI +
Sbjct: 403 EQDADFIKALCDDLNTPLALSILFGLRENAKSDSNAAEKMFLALEFLGILDLSKWA 458
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 28/66 (42%), Positives = 40/66 (60%)
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
K ++S AI+ LV+ RL +LK K F+ AD IR L +KG L+D K+ D G+R+
Sbjct: 522 LELKNGETNDLSAAIDALVEMRLEMLKTKNFAEADKIRDDLLAKGIQLKDGKDKDTGERV 581
Query: 455 TRWKQK 460
T W+ K
Sbjct: 582 TTWEVK 587
>gi|227502088|ref|ZP_03932137.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
gi|227077147|gb|EEI15110.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
Length = 468
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 148/480 (30%), Positives = 226/480 (47%), Gaps = 47/480 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I++T R +F+ I P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MSTLRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ +A + N S ++F K L L P+
Sbjct: 61 YD--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQKM 175
+PRAT + QM+ +Q +I G AY + FD + + ++
Sbjct: 113 EPRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRV 172
Query: 176 GTRVPEKYHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ ++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG FD
Sbjct: 173 EEMEQGESDNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GGLDL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I+ +L
Sbjct: 233 IHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSISNML 290
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGII 347
E + +R + HYR ++++ LTEA + +G
Sbjct: 291 ELVR-------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRFAGVERGDW 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
P A+ +D+ A+ A+H R K+ AH+LG + +
Sbjct: 344 TPDFEDAMNDDIAVPKALAAIHTTVRAGNKDLAAGDEDAARAKAAQVRGMAHVLGFDPLE 403
Query: 399 EH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ ++ R K F++AD +R +L + G + D +
Sbjct: 404 WEDGGEASGADAALDALVQAELERRTQARAEKDFATADAVRDRLTAAGITITDTPDGPTW 463
>gi|188991323|ref|YP_001903333.1| cysteinyl-tRNA synthetase [Xanthomonas campestris pv. campestris
str. B100]
gi|167733083|emb|CAP51281.1| unnamed protein product [Xanthomonas campestris pv. campestris]
Length = 479
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 188/498 (37%), Positives = 253/498 (50%), Gaps = 61/498 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++++N L R++ F +DPS+ +YVCGPTVY++AHIGNAR +VFDVL LLR
Sbjct: 1 MPMSLRLHNNLTRRVEPFAPLDPSSPTLYVCGPTVYNYAHIGNARGPVVFDVLAALLRRR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + Y RNITD+DDKI A+ + IS IT + + +D L + P
Sbjct: 61 YG--ALRYARNITDVDDKINAAAQAQGV------PISTITDRFAAIYRQDMAALGVVPPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P AT HIPQ++ +I+ +I HAY A ++F +S +YG SRR DE G RV
Sbjct: 113 IEPEATAHIPQIVAMIEQLIASEHAYAAEGHVLFAVASFADYGKLSRRDPDEMLAGARVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG DIH GG+DL
Sbjct: 173 VAPYKRNPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGPTIDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS CA A W+HNG LN G KMSKS GN T+++L+
Sbjct: 233 QFPHHENEIAQSECAHGGAVFARFWLHNGMLNFSGAKMSKSLGNIETVHDLIA------- 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---- 356
P +RLA+L HYR+P+D++ + L + D S
Sbjct: 286 KHPPEALRLALLSAHYRQPLDWSDGLIETETNRLDGLYKLLNRLKAFDEVQASIPDEIED 345
Query: 357 ---NDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEVCKEH-------- 400
DLNT A++ L K A + + + I ++ K
Sbjct: 346 ALNEDLNTPLALRVLAKFADRARRALKEFAPPGGPDSEQTGSIDAVKKAKAELLGAGLAL 405
Query: 401 --------------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ I LV ER K K F+ AD IR+QL +G
Sbjct: 406 GLLQQDPAAWLSRGNKAGTSTDAGDDARIAALVDERSAAKKAKDFARADAIRQQLADEGI 465
Query: 441 ILEDYKNPDNGQRMTRWK 458
+LED + RWK
Sbjct: 466 VLEDT------AQGVRWK 477
>gi|182680844|ref|YP_001829004.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
gi|61252101|sp|Q87EL7|SYC_XYLFT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|182630954|gb|ACB91730.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M23]
Length = 467
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 264/486 (54%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 1 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 61 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A +W+HNG LN EG KMSKS GN T++EL+
Sbjct: 233 PHHENEIAQSRCAHGSSTFARVWMHNGMLNFEGAKMSKSLGNIETVHELVA-------KH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T + +AL
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALD 345
Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
+DLNT A+ L LA E+ T +H + A +
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED +
Sbjct: 406 AWFSQGTNESDETHIQALIDARGAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459
Query: 455 TRWKQK 460
RW ++
Sbjct: 460 VRWMKQ 465
>gi|332665290|ref|YP_004448078.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
gi|332334104|gb|AEE51205.1| cysteinyl-tRNA synthetase [Haliscomenobacter hydrossis DSM 1100]
Length = 502
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 163/510 (31%), Positives = 239/510 (46%), Gaps = 66/510 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++KIYN+L ++ F+ I P + MYVCGPTVY H+GN R + FD++YR L++
Sbjct: 1 MNSELKIYNSLSKEKEVFRPIHPGRVGMYVCGPTVYSNVHLGNCRTFVSFDIVYRYLQFL 60
Query: 61 YGEKCVTYVRNITDI-----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
V YVRN+TD+ +DK+ +RAR E I K T F
Sbjct: 61 GY--KVRYVRNVTDVGHLEGDVDTGGEDKLGKRARLEEL------QPMEIAHKYTVGFHD 112
Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----SSIPNYGSF 165
L P+ +PRAT HIP+ I ++Q I+ +G+AYE N + FDT YG
Sbjct: 113 MMRVFNVLPPSIEPRATGHIPEQIEMVQQILDNGYAYEVNGSVYFDTLKFAEKDGIYGEL 172
Query: 166 SRRKIDEQKM--GTRVPEKYHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAM 222
S RKI++ + ++ K++P+DF +W K + W SPW G PGWH+ECSAM
Sbjct: 173 SGRKIEDLIAESRNNLKKQDEKRHPSDFAIWIKAAPEHLMHWNSPWSVGFPGWHLECSAM 232
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
S+ YLGK FDIHGGG DL FPHHENE+AQ+ A A W+H L L G+KMSKS+
Sbjct: 233 STKYLGKTFDIHGGGNDLKFPHHENEVAQNYGACGCTP-ARTWMHGNMLLLNGKKMSKSD 291
Query: 283 GNFITINELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GN I EL K + + V+R ML THYR +D + L AE + +
Sbjct: 292 GNSIMPEELFTGKSAHLSKGYTPMVVRFFMLQTHYRSTLDLSDDALQAAEKGYRRLMEAY 351
Query: 342 TSK------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTK------ 377
+ +V + +D NT A+ L ++
Sbjct: 352 ATLQALPFSGDAAAGAQDKEVSEWITSVHDEMNDDFNTPKALARLFEIVSRVNSWKGGQL 411
Query: 378 ---------NHDLLPIFNAS-AHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMK 423
+L F I G++ + + + + ++ R + K
Sbjct: 412 SMEGLTEATYKELKATFTTFIFDIFGLQDEAAASSDDGFKTLDGLMHLIIDMRQDVRTRK 471
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++++D IR L+ G +L+D K +
Sbjct: 472 DWAASDKIRDVLKEVGIVLKDGKEGTAWSK 501
>gi|255325868|ref|ZP_05366960.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
gi|255297080|gb|EET76405.1| cysteine--tRNA ligase [Corynebacterium tuberculostearicum SK141]
Length = 462
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 150/474 (31%), Positives = 222/474 (46%), Gaps = 41/474 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++IY+T R +F I P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MSTLRIYDTATRSQRDFDPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ +A + N S ++F K L + P+
Sbjct: 61 YD--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVIPPSV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ---KMGTR 178
+PRAT + QM+ +Q +I G AY A+ + FD ++ + +M
Sbjct: 113 EPRATGFVTQMVDYMQRLIDAGFAYPADGSVYFDVAAWTKAEGSDYGSLSGNKVEEMEQG 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E K+ DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG FDIH GGL
Sbjct: 173 EGEDSAKRGAQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSNFDIHCGGL 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I +LE +
Sbjct: 233 DLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMSGEKMSKSLGNVLSIPNMLELVR-- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVLS 353
+R + HYR ++++ LTEA + G
Sbjct: 289 -----PVELRYYLGSAHYRSVLEYSETALTEAAAGYRRIEDFLGHFDDLELGEWTQGFAD 343
Query: 354 ALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEH---- 400
A+ +D+ A+ +H R K L A AH+LG + +
Sbjct: 344 AMNDDIAVPKALAEIHTTVRAGNKALAAGDEAEARTLAGQVRAMAHVLGFDPLEWEDGAQ 403
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + ++ R K F++AD +R +L + G + D +
Sbjct: 404 ASGADAALDALVHAELERRTQARADKDFATADAVRDRLAAAGITITDTPDGPTW 457
>gi|227541001|ref|ZP_03971050.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227183261|gb|EEI64233.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 451
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 155/473 (32%), Positives = 241/473 (50%), Gaps = 41/473 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+IY++ R + +F + P + +Y+CG TV HIG+ R + FD+L L
Sbjct: 1 MTFRIYDSKTRTLQDFVPVRPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +VRN+T+IDDKI+ +A + + + + F + L P+ +
Sbjct: 61 DTA--FVRNVTNIDDKILTKAAENG------RPWWEWAATHERAFNEAYRILGVTPPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI ++I +Q II +GH Y A+ + ++I YG S ++IDE G
Sbjct: 113 PRATGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG FDIH GGLDL F
Sbjct: 173 --KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A +K A W+HNG++ + G KMSKS GN +++ ++E +
Sbjct: 231 PHHENEIAQATAAG--DKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----DPAVLSALYN 357
+R + HYR ++++ L EA + + S+G + ++AL +
Sbjct: 283 -PVELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDD 341
Query: 358 DLNTVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKEHL-------NKNIS 406
DL +A+ +H RE K +L A ILG++ E + ++
Sbjct: 342 DLGVPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALA 401
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E +Q+R + K +++AD +R L + G L+D + T WK
Sbjct: 402 KLVEVHIQQRQKAREEKDWATADAVRDTLAAAGIELKDGAD------GTTWKV 448
>gi|288800463|ref|ZP_06405921.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
gi|288332676|gb|EFC71156.1| cysteine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
Length = 497
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 162/501 (32%), Positives = 239/501 (47%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+++ IYNTL RK F+ ++ N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 3 KQQLVIYNTLSRKKETFEPLNAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLKHLG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 63 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
L L P+ +P+AT HI + L++ I+ +G AYE+N I FDT+ YG S R
Sbjct: 115 NALNVLPPSIEPQATGHIIEQEQLVKEIMDNGFAYESNGSIYFDTAKYNQKYRYGKLSGR 174
Query: 169 KIDEQK-MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+D+ + K+N DF LWK++TP W S W G PGWH EC+AM Y
Sbjct: 175 NLDDVINASRELGGVEDKRNQTDFALWKKATPEHIMKWPSSWSEGFPGWHCECTAMGRKY 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL+FPHHE EIAQ+ + W+HN + + G+KM KS GNFI
Sbjct: 235 LGSNFDIHGGGMDLMFPHHECEIAQAVASQG-HDMVRYWMHNNMITINGKKMGKSLGNFI 293
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ E + + +++ IR +L HYR +DF+ + L AE L++
Sbjct: 294 TLEEFFKGTHEALTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGLNRLLSGIKDLD 353
Query: 346 IIDP-----------------AVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
I P +A+ +DL T I L + +
Sbjct: 354 RIQPANESDKATATFVKECRSRCYNAMNDDLQTPVVISILFEACHIINTIVDHKGTISSE 413
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + ++G+ N+ A ++ ++ R K ++++D I
Sbjct: 414 DLAELKETMHLFAFDLMGLRAENSDNNQAREEAYGKVVDMVLDLRSKAKADKDWATSDKI 473
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ +
Sbjct: 474 RDMLADAGFEVKDTKDGAVWK 494
>gi|309804596|ref|ZP_07698661.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
gi|315653979|ref|ZP_07906895.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
gi|308165988|gb|EFO68206.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 09V1-c]
gi|315488675|gb|EFU78321.1| cysteine--tRNA ligase [Lactobacillus iners ATCC 55195]
Length = 470
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 175/490 (35%), Positives = 253/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAETVLKRYKNILRNIEERLSEKNDATDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L D + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N ++KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|156937781|ref|YP_001435577.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
gi|187629828|sp|A8AB68|SYC_IGNH4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|156566765|gb|ABU82170.1| cysteinyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Length = 464
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 263/488 (53%), Gaps = 59/488 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++NTL R++ +F+ ++P +RMYVCGPTVYD +HIG+AR + FD++ + LR
Sbjct: 1 MLKVFNTLTRRLEDFKPLEPPLVRMYVCGPTVYDHSHIGHARTWVAFDIIKKYLRLKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+NITDIDDKII RAR+ S + T ++ + +L T P
Sbjct: 60 -NVIHVQNITDIDDKIINRARELGVS------WKEVADTYTNEYFELMKKLKVFP-TVHP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T+HI +I +Q+++ G+AY + + FD P YG S I ++KM ++
Sbjct: 112 RVTDHIDDIIEFVQDLVDKGYAYVTQSGVYFDVDKYPYYGQLSG--IKDKKMWSQEEFVK 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK + P EP W+SPW +GRPGWHIECS MSS YLGK FD+HGG DLIFP
Sbjct: 170 DKKNPYDFALWKCAKPGEPWWDSPWCKGRPGWHIECSTMSSKYLGKQFDVHGGARDLIFP 229
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + W+H+G+L ++G KMSKS GN + + ++L +S+
Sbjct: 230 HHENEIAQSEARFGVRPWVKYWLHSGYLTVKGEKMSKSLGNIVPLKDVL-------KSFE 282
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLS 353
V+R + HYR +DF+ +RL EA+ L++ T KG +D +
Sbjct: 283 PEVVRYWLSSAHYRTELDFSWERLEEAKRSLTRMRMTVDELRKIVKKESPKGKLDEWEIK 342
Query: 354 --------------ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAH 390
A+ ND NT A A+ + R K + +L N +
Sbjct: 343 AIYEVSKIRNEFYDAMDNDFNTPEAWAAVREALRLGNKAIEEGSWEVSLAVLEFVNEADK 402
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ EV +E +++ + I+ LV+ R L +MK++ ADYIR +L+ G L D
Sbjct: 403 VF--EVFEERVHEGVEPFIDLLVEVRSKLREMKQWELADYIRSKLDELGVKLLDKG---- 456
Query: 451 GQRMTRWK 458
+ T W+
Sbjct: 457 --KETEWR 462
>gi|237716747|ref|ZP_04547228.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
gi|262405523|ref|ZP_06082073.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|294646338|ref|ZP_06723985.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294806673|ref|ZP_06765504.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|229442730|gb|EEO48521.1| cysteinyl-tRNA synthetase [Bacteroides sp. D1]
gi|262356398|gb|EEZ05488.1| cysteinyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|292638293|gb|EFF56664.1| cysteine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294446093|gb|EFG14729.1| cysteine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
Length = 493
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFVPLHAPHVGMYVCGPTVYGDAHLGHARPSITFDVLFRYLTHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDHHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFNGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLIEAIDAL 351
Query: 345 GIIDP---------------AVLSALYNDLNTVSAIQALHKLAREST---------KNHD 380
I P A+ +DLNT I L + AR D
Sbjct: 352 DKITPAPATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 381 LLPIFNAS----AHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
L + I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKELKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|119476779|ref|ZP_01617089.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
gi|119450035|gb|EAW31271.1| cysteinyl-tRNA synthetase [marine gamma proteobacterium HTCC2143]
Length = 455
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 184/479 (38%), Positives = 254/479 (53%), Gaps = 47/479 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+ F+ I P + MYVCGPTVY+ HIGNARP++VFD LYR+L+ Y
Sbjct: 1 MTLFVYNSYTGTKEAFEPIKPDTVTMYVCGPTVYNRVHIGNARPVVVFDTLYRVLKTLY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITDIDDKI+ A+ + I+ I+S+ + D L L P
Sbjct: 60 -SSVIYARNITDIDDKIMAAAKAGG------ETIAAISSRYATAYFDDMAELNNLPPDII 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT+H+ +M+ +IQ +I GHAYEA + I+FD S+ YG ++R +++ G RV
Sbjct: 113 PYATDHVGEMVAMIQTLIDKGHAYEAESHILFDVKSMSGYGKLAKRSLEDMLAGARVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK DF+LWK ST EPGW+SPWGRGRPGWH+ECSAM +LG DIHGGG+DL F
Sbjct: 173 DYKKYAGDFVLWKPSTDEEPGWDSPWGRGRPGWHLECSAMIEKHLGNTIDIHGGGIDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS CA E W+HN ++N++G KMSKS GNF + +LL+ +
Sbjct: 233 PHHENELAQSTCAHDGEPFVRYWMHNAYINIDGEKMSKSLGNFRMVKDLLD-------HY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDPAVLS 353
P V+R ++L HYR ++F+ L A+ L + D V
Sbjct: 286 PGEVLRFSILSAHYRSELNFSADALDSAQKTLDNLYGVLRSVETTDVDPVIELSDSKVYK 345
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEH-------- 400
AL +DLNT AI+ +H LA+ L SA ++GI
Sbjct: 346 ALLDDLNTPIAIREIHALAKAMKSASGETQQRLKSELLKSAALMGILQQDPDEWLMVKAG 405
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I +E V E + K + AD IR +L+ +G IL ++ WK+
Sbjct: 406 EGDLSDIEVENQVVEMQQARQQKDYKHADDIRDRLQQRGIIL--TRDG--------WKR 454
>gi|157825244|ref|YP_001492964.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
gi|187630857|sp|A8GM31|SYC_RICAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157799202|gb|ABV74456.1| cysteinyl-tRNA synthetase [Rickettsia akari str. Hartford]
Length = 459
Score = 354 bits (907), Expect = 2e-95, Method: Composition-based stats.
Identities = 191/476 (40%), Positives = 275/476 (57%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ +YNTL R F D +NI+MYVCGPTVYD HIGN+R ++V+D+LYR++
Sbjct: 1 MQIQLHLYNTLSRTKEVFNPQDQANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+G + V YVRNITD+DDKII+RA + I+ +T K TQ+F + L C+ P
Sbjct: 61 FGSRAVKYVRNITDVDDKIIDRAE------LLGITINELTDKVTQEFHTNMAYLGCMLPN 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY +N + FD S PNY S R ++E G R+
Sbjct: 115 IEPKATEHIDVMIEIIERLIAKDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K +P DF+LWK + P E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 KSKTKNHPQDFVLWKPAKPNESTNMNFESPWGFGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLVFPHHTNEIAQSRCAFPDSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KDISGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHNFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR-----ESTKNHDL-LPIFNASAHILGIE---VCKEHLNKN 404
+L +D+NT A++ ++ A+ ++ K L + A+ +G+ + +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFIAKTEKERQLNASVIITCANFIGLMNQTPHEWFNSGV 408
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
S+ I +LV +RL K K + AD IR QL ILED + T W+++
Sbjct: 409 DSLYINELVNKRLEAKKQKNWLLADQIRNQLLEGKIILEDKSDGT-----TIWRKE 459
>gi|325859814|ref|ZP_08172944.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
gi|325482740|gb|EGC85743.1| cysteine--tRNA ligase [Prevotella denticola CRIS 18C-A]
Length = 495
Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats.
Identities = 163/501 (32%), Positives = 231/501 (46%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I ++ MYVCGPTVY H+G+ARP I FD+L+R LR+
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD S R
Sbjct: 113 RALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ + +R K N ADF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NLTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DLIFPHHE EIAQ+ + ++ W+HN + + G+KM KS GNFI
Sbjct: 233 LGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T+ + + + + IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLA 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
T A+ +DL T + I L +
Sbjct: 352 CIQASAASDGNTGKFVSAFRQKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISAD 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L + GF ++D K+ +
Sbjct: 472 RDALSAAGFQVKDTKDGVTWK 492
>gi|296158961|ref|ZP_06841789.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
gi|295890836|gb|EFG70626.1| cysteinyl-tRNA synthetase [Burkholderia sp. Ch1-1]
Length = 465
Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats.
Identities = 171/498 (34%), Positives = 253/498 (50%), Gaps = 73/498 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII RA + + I +T + + +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIKALHEDADALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK++ P EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKQAKPDEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R + HYR P++++ + +A L++
Sbjct: 288 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAELDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKN 404
+A+ +D NT A+ L +LA E + D L + ++G+ +
Sbjct: 344 YAQRFQAAMNDDFNTPVAVSVLFELASEVNRTRDSALARQLRSLGAVIGLLGREPR---- 399
Query: 405 ISIAIEKLVQERLIL-----------------------LKMKKFSSADYIRKQLESKGFI 441
+Q+ + K F++AD IR +L G
Sbjct: 400 ------AYLQQ--AAGTAAVGALEAAAIEAKIAARAAAKQSKDFAAADRIRSELLEAGVA 451
Query: 442 LEDYKNPDNGQRMTRWKQ 459
LED T W++
Sbjct: 452 LEDKPGGL-----TEWRR 464
>gi|260172516|ref|ZP_05758928.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
gi|315920809|ref|ZP_07917049.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
gi|313694684|gb|EFS31519.1| cysteinyl-tRNA synthetase [Bacteroides sp. D2]
Length = 493
Score = 354 bits (907), Expect = 3e-95, Method: Composition-based stats.
Identities = 168/498 (33%), Positives = 249/498 (50%), Gaps = 56/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ IYNTL+RK F + ++ MYVCGPTVY AH+G+ARP I FDVL+R L +
Sbjct: 1 MEHQLTIYNTLDRKKELFIPLHAPHVGMYVCGPTVYGDAHLGHARPAITFDVLFRYLSHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLEHDADDGEDKIAKKARLEELE------PMEVVQYFLNRYHKA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L+P+ +P A+ HI + I L+Q I+ G+AYE+ + FD + +YG S
Sbjct: 113 MEALNVLSPSIEPHASGHIIEQIQLVQKILDAGYAYESEGSVYFDVAKYNKDYHYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K+NPADF LWK++ P W SPW G PGWH EC+AM
Sbjct: 173 RNLDDVLNTTRDLDGQSEKRNPADFALWKKAQPEHIMRWPSPWSDGFPGWHAECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DLIFPHHE EIAQS + + + W+HN + + G KM KS GNF
Sbjct: 233 YLGEHFDIHGGGMDLIFPHHECEIAQSVASQG-DDMVHYWMHNNMITINGTKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT++E K +++ IR +L HYR +DF+ + L +E L + + +
Sbjct: 292 ITLDEFFTGTHKLLAQAYTPMTIRFFILQAHYRSTVDFSNEALQASEKGLQRLMEAIDAL 351
Query: 345 GIID---------------PAVLSALYNDLNTVSAIQALHKLARESTK------------ 377
I A+ +DLNT I L + AR
Sbjct: 352 DKITSSSATSEGINVKELRAKCYEAMNDDLNTPIVIAQLFEGARIINNIIAGNATISAED 411
Query: 378 NHDLLPIF-NASAHILGIEVCKEHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRK 433
DL F S I+G++ K + + ++ L+++R+ K ++++D IR
Sbjct: 412 LKDLKETFHLFSFDIMGLKEEKGSSDGREAAYGKVVDMLLEQRMKAKANKDWATSDEIRN 471
Query: 434 QLESKGFILEDYKNPDNG 451
L + GF ++D K+
Sbjct: 472 TLTALGFEIKDTKDGFEW 489
>gi|71275651|ref|ZP_00651936.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
gi|71897805|ref|ZP_00680031.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
gi|170729530|ref|YP_001774963.1| cysteinyl-tRNA synthetase [Xylella fastidiosa M12]
gi|71163542|gb|EAO13259.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Dixon]
gi|71732360|gb|EAO34414.1| Cysteinyl-tRNA synthetase, class Ia [Xylella fastidiosa Ann-1]
gi|167964323|gb|ACA11333.1| Cysteine--tRNA ligase [Xylella fastidiosa M12]
Length = 467
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 185/486 (38%), Positives = 263/486 (54%), Gaps = 49/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R++ F+ +DP+ MYVCGPTVY++ HIGNAR +VF VL LLR YG
Sbjct: 1 MSLHLYNTLHRRVEPFEPLDPACPTMYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ Y RNITD+DDKI A+++ IS IT + + +D +L P +
Sbjct: 61 --ALRYARNITDVDDKINTAAQEQGV------PISAITERFCAAYREDMKKLGVEPPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+PQ+I +I+ +I HAY A ++F +S +YG SRR +E G RV
Sbjct: 113 PEATAHMPQIIAMIEQLIERQHAYVAMEHVLFAVNSFADYGQLSRRDPEEMLAGARVEIA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++P+DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+DL F
Sbjct: 173 PYKRDPSDFVLWKPSSDQLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA A IW+HNG LN EG KMSKS GN T++ L+
Sbjct: 233 PHHENEIAQSRCAHGSSTFARIWMHNGMLNFEGAKMSKSLGNIETVHGLVT-------KH 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------SALY 356
P +R A+L HYR+P+D++ + ++ L++ T + +AL
Sbjct: 286 PPEALRYALLSAHYRKPLDWSEALIAQSVRTLNRLYGTLRELAAYPARAIIPGNIEAALD 345
Query: 357 NDLNTVSAIQALHKLARES------TKNHDLLPIFNASAHILGIE--------------- 395
+DLNT A+ L LA E+ T +H + A +
Sbjct: 346 DDLNTPQALAELATLANEARIQLADTTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPE 405
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ N++ I+ L+ R + + F AD IR QL ++G +LED +
Sbjct: 406 AWFSQGTNESDETHIQALIDARSAAKQARDFVRADAIRAQLAAEGIVLEDT------PQG 459
Query: 455 TRWKQK 460
RW ++
Sbjct: 460 VRWMKQ 465
>gi|271962520|ref|YP_003336716.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|270505695|gb|ACZ83973.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 465
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 165/479 (34%), Positives = 235/479 (49%), Gaps = 46/479 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + EF ++P +Y+CG TV HIG+ R + FDVL R +
Sbjct: 1 MSLHLYDTSVRTVREFVPVEPGRASIYLCGATVQAPPHIGHIRSGVNFDVLRRWMVRSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+ RN+TDIDDKII A E +I +N + F L CL PT +
Sbjct: 61 E--VTFCRNVTDIDDKIIRVAADEGV------PWFVIAERNQRAFTWAYEVLGCLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P+MI L++ +I GHAY ++ ++ FD S YGS S ++++ +
Sbjct: 113 PRATGHVPEMIELMERLIAAGHAYASSGDVYFDVMSYADRYGSLSNQRLENMRAAGDTDT 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK P EP W +PWGRGRPGWH+ECSAM++ YLG FDIHGGG+DLI
Sbjct: 173 DSCKRDPRDFALWKGEKPGEPTWPTPWGRGRPGWHLECSAMATKYLGPTFDIHGGGVDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+ QS A A W+HNG L + KMSKS GN + I E+ +
Sbjct: 233 FPHHENELTQSQAAGDG--FARYWMHNGMLKIGAEKMSKSLGNSLLIPEVT-------KK 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------DPAV 351
+R + HYR ID++ + L EA + T + A
Sbjct: 284 VRPVELRYYLAAPHYRSSIDYSEEALAEAASAYQRIEGFVTRAAEVIHDVDAHAPLPQAF 343
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
AL +DL T A+ +H++ RE LL +LG++ E
Sbjct: 344 ADALDDDLGTPQALAVVHEVVREGNVALAQGNKEQVARLLAETQNMLDVLGLDPRSEQWR 403
Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + +++R K F++AD IR QL G ++ED +
Sbjct: 404 SSGGDTGLRSTVDALVSVALEQRQAARGRKDFAAADGIRDQLAGAGILVEDTPQGPRWE 462
>gi|296114670|ref|ZP_06833322.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295978766|gb|EFG85492.1| cysteinyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 471
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 187/479 (39%), Positives = 265/479 (55%), Gaps = 43/479 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R F DP+ + MYVCGPTVY++AH+GNAR +VFD+LYR+LR+ YG
Sbjct: 12 HPLRLTNTLSRSKQIFVPRDPNRVTMYVCGPTVYNYAHLGNARSAVVFDLLYRILRHSYG 71
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RN TD+DDKI A + I IT + + D L L P +
Sbjct: 72 --RVLYARNFTDVDDKINAEAVRTG------QPIGAITDRFISAYHADMAALGVLRPDFE 123
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+ +I LI ++ GHAY+A ++F S +YG S R ++ G RV
Sbjct: 124 PRVTEHLSDIIALIDRLLEAGHAYQAAGHVLFHVPSFADYGRLSGRSREDVIAGARVEVA 183
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF+LWK S+ PGWESPWGRGRPGWHIECSAM+ H LG D+HGGG DLIF
Sbjct: 184 PFKRDPADFVLWKPSSDDAPGWESPWGRGRPGWHIECSAMTEHCLGLPIDLHGGGQDLIF 243
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + W+HNGF+ ++GRKMSKS GN + ++LLE
Sbjct: 244 PHHENEIAQSVSARDGAAYCDFWVHNGFVTVDGRKMSKSLGNVVLAHDLLERH------- 296
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGIIDPAVL 352
IRLA+L HYR+P+D++ + LTE+ LS+ + + I+ V+
Sbjct: 297 DGQTIRLALLSAHYRQPLDWSDKLLTESGRALSRLKRLIADTASSDHDACAVPIVRNRVV 356
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGI------EVCKEH 400
AL +DLNT +A+ AL +ARE + + +LG+ + +
Sbjct: 357 QALADDLNTPAAMTALFSIARELRHADHVAERSRLRRELVEAVTLLGLKHDSPPDCLSQG 416
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ + A+ ++V +R + + K + AD +R L KG +L+D TRW++
Sbjct: 417 TDETSNAALAEMVAQRDVARRRKDYQEADILRDALLLKGVVLDDT------HEGTRWRR 469
>gi|317486410|ref|ZP_07945237.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316922320|gb|EFV43579.1| cysteinyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 485
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 177/499 (35%), Positives = 245/499 (49%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ YNT+ RK F + + +Y CG T Y +HIG+AR + FD+L RLLRY E
Sbjct: 1 MQFYNTMSRKKETFTPVRKGLVGVYACGITAYALSHIGHARSAVAFDILVRLLRYKGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII+RA E S I + + +D RL + +PR
Sbjct: 60 -VTFVRNFTDVDDKIIKRANDEGVSST------EIAETYIKAYHEDMDRLGVIRADIEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT HI +M+ L + +I G AY + ++ F S P YG S R D+ + G RV
Sbjct: 113 ATEHIQEMLNLTERLIADGKAYATPSGDVYFRVRSFPGYGKLSGRTPDDLRSGARVVPGD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS Y+ DIHGGGLDLIFP
Sbjct: 173 EKEDPLDFALWKSAKPGEPYWESPWGKGRPGWHIECSAMSEKYIPLPLDIHGGGLDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A + ANIW+HNGF+ ++ KMSKS GNF TI ++LE+ +
Sbjct: 233 HHENEIAQTEAALG-KPLANIWMHNGFVQVDSEKMSKSLGNFKTIRDILES-------YL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A +R + HYR PIDF++ + E+E + +
Sbjct: 285 AETLRYFLAGKHYRSPIDFSLDNMDESERSQKRVYECLREVDKALARENWKPGAAPAELV 344
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLA------------RESTKNHDLLPIFNAS- 388
D + + AL +D+NT +A+ L + R S D+L F +
Sbjct: 345 EELKQQDQSFMDALEDDVNTAAAMGHLFNMVRIAGRVLEDKKLRNSEGGRDILRAFRDAT 404
Query: 389 ---AHILGIEVCKEHLNKNISIAIEK------------LVQERLILLKMKKFSSADYIRK 433
+LG+ K I L++ER K F+ +D R
Sbjct: 405 AKWDTLLGLFAQKPEGFLASLREIRARRRGLDMNKVAGLLRERQEARAAKDFARSDAARD 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G + D
Sbjct: 465 ELAALGVEVRDTPEGPVWD 483
>gi|94310030|ref|YP_583240.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|93353882|gb|ABF07971.1| cysteinyl-tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 491
Score = 353 bits (906), Expect = 3e-95, Method: Composition-based stats.
Identities = 176/482 (36%), Positives = 253/482 (52%), Gaps = 45/482 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++ IYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD+++R LR
Sbjct: 30 MQQLNIYNTLAREKQPFVPIEPGKVRMYVCGMTVYDYCHVGHARVMVVFDMVHRWLRAAG 89
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV+NITDIDDKII RA + + I +T++ Q +D T L + P +
Sbjct: 90 YD--VTYVQNITDIDDKIIRRAAENG------ETIGQLTTRFIQYMHEDATALGVIRPDY 141
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT ++PQM+ +I+ + G AY+ + ++ + P YG S + +++ + G RV
Sbjct: 142 EPRATEYVPQMLNIIEKLEAKGLAYQATDGDVNYSVRKFPGYGKLSGKSLEDLRAGERVN 201
Query: 181 EKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
K++P DF+LWK + EP W+S WG GRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 202 ANDAKQDPLDFVLWKSAKATEPPESKWDSKWGSGRPGWHIECSAMSCTLLGEHFDIHGGG 261
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHENEIAQS A N+W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 262 ADLQFPHHENEIAQSEGASGR-PFVNMWMHNGFVRVNDEKMSKSLGNFFTIRDVL----- 315
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGII 347
+ + A V+R +L HYR P++++ L +A L++ +
Sbjct: 316 --KEYDAEVVRFFILRAHYRSPLNYSDAHLDDARHALTRLYTALKETQPGGCAVDWEESH 373
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH----- 400
A+ +D NT A+ L LA E + + A LG+ H
Sbjct: 374 AKRFAEAMNDDFNTPIAMSVLFDLASEVNRTGSVAAAHQLKALGGTLGLLERDPHTFLQG 433
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE + R + F+ AD IR +L G +LED T W
Sbjct: 434 GHVAGSLSGEQIEAQIAARRAAKAARNFAEADRIRAELLEAGVVLEDKPGGA-----TEW 488
Query: 458 KQ 459
++
Sbjct: 489 RR 490
>gi|222111282|ref|YP_002553546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
gi|254781677|sp|B9MAU5|SYC_DIAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|221730726|gb|ACM33546.1| cysteinyl-tRNA synthetase [Acidovorax ebreus TPSY]
Length = 458
Score = 353 bits (906), Expect = 4e-95, Method: Composition-based stats.
Identities = 176/500 (35%), Positives = 241/500 (48%), Gaps = 89/500 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + EF I+P ++RMYVCG TVYD H+G+AR MI FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALEEFSPIEPGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + + I +T + +D L PTH+
Sbjct: 60 -LAVTYVRNITDIDDKIIKRAVENG------ETIRSLTDRMIDALHQDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+A N ++ + P YG S + +DE G RV
Sbjct: 113 PRATAYVPQMLDMIGTLQGKGLAYQAGNGDVNYAVRKFPGYGKLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K +P DF+LWK + P EP W SP+G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 QDGKHDPLDFVLWKSAKPEEPADVKWRSPFGEGRPGWHIECSAMGCALLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A +W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPFARLWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A +R ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSNVHLDDARAALKRLYTALSLVAPAPVEVDWAEGYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHLNKNIS 406
+A+ D T A+ L LA E ++ + A LG+
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSPAAAGLLKALGRHLGLLQADPQ------ 398
Query: 407 IAIEKLVQERLILLKMKKFSSA----------------------------DYIRKQLESK 438
F A D IR L ++
Sbjct: 399 -----------------DFLKAGAGLDEAAIQAQIAARAAAKAAKNFAEADRIRNDLLAQ 441
Query: 439 GFILEDYKNPDNGQRMTRWK 458
G +L+D T W+
Sbjct: 442 GIVLKDSAT------GTTWE 455
>gi|29830510|ref|NP_825144.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|61216621|sp|Q82GD0|SYC_STRAW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|29607622|dbj|BAC71679.1| putative cysteinyl-tRNA synthetase [Streptomyces avermitilis
MA-4680]
Length = 466
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 242/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFTPLLPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSADHG------RPWWAIGYENERAFNDGYDVLGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA+ + FD S P Y S +++ + + +
Sbjct: 113 PRATGHITEMVEMMRTLIERGHAYEADGNVYFDVRSFPEYLQLSNQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DEFARYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KQW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPSPEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++
Sbjct: 343 AEAMDDDLGVPQALAIVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 403 GEGDRGEDLHGVVDTLVRMVLDQREAARARKDWATADAIRDQLNQSGLVIEDSPQGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|304319902|ref|YP_003853545.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
gi|303298805|gb|ADM08404.1| cysteinyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
Length = 457
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 177/477 (37%), Positives = 241/477 (50%), Gaps = 39/477 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ Y+T + F DP I +Y CGPTVY HIGNAR + D++ RLL+ YG
Sbjct: 1 MSLSFYDTFRGHVEPFTPADPERITVYCCGPTVYAPPHIGNARAALTADLVVRLLKDRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V + RN TDIDDKII A+ E I ++T++ T +++ L CL P
Sbjct: 61 AEKVIFARNFTDIDDKIIAAAKDEGV------PIDVVTARATAAYLEGLDGLFCLRPDVA 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI M LI +++ GHAY A I+FDT S P YG SR + G RV
Sbjct: 115 PRATAHIDSMQALIGSLLERGHAYGAEGHILFDTQSFPAYGQLSRLDREAILAGARVEIA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRG-----RPGWHIECSAMSSHYLGKVFDIHGGG 237
+K++ ADF+LWK S PGW P RPGWHIECSAM + LG DIH GG
Sbjct: 175 PYKRDAADFVLWKPSPAEVPGWPVPASWPIDGEGRPGWHIECSAMIASVLGPSIDIHLGG 234
Query: 238 LDLIFPHHENEIAQSCCA--DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQSCC A W+HNG L G KMSKS GN T +LL
Sbjct: 235 QDLRFPHHENEIAQSCCGTDTGETPLARYWLHNGMLRFGGEKMSKSRGNIETPQDLLAA- 293
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVL 352
WP IRLA++ YR+P+D++ + L ++ L ++ + K + V+
Sbjct: 294 ------WPGEAIRLALMSAQYRQPLDWSNELLAGSKAQLDRFYRVVPDGPAKAAMPDWVM 347
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIE-------VCKEHLNK 403
+AL +DLNT A+ +H+L RE+ D+ A+ LG +
Sbjct: 348 AALEDDLNTPKALAMMHEL-REAAGRGDIEAAHGLKAAGAFLGFFRQTADEWFRGATADG 406
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I+ + R K ++ AD IR +L ++G +LED G W+++
Sbjct: 407 PTESDIDAQIAARQAAKTAKNWAEADRIRDELGAQGIVLED------GPEGVTWRRR 457
>gi|290959417|ref|YP_003490599.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
gi|260648943|emb|CBG72057.1| cysteine--tRNA ligase [Streptomyces scabiei 87.22]
Length = 467
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 162/485 (33%), Positives = 246/485 (50%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFAPLTPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+VRN+TDIDDKII +A + I +N + F L CL PT++
Sbjct: 61 D--VTFVRNVTDIDDKIIVKAADQG------RPWWSIGYENERAFNDGYGVLGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +M+ +++ +I GHAYEA+ + FD S P Y S +++ + + +
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLQLSNQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSAKPGEPTWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DDFATYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEAALREAESAFARIEGFVQRVIEKAGGVVEPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHL- 401
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDAHWA 402
Query: 402 ------NKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+++ ++ L +Q+R K +++AD IR QL G +ED +
Sbjct: 403 GAEGDRGEDLHGVVDTLVGLVLQQREAARARKDWATADAIRDQLNQSGLAIEDGPDGPRW 462
Query: 452 QRMTR 456
R
Sbjct: 463 TLGPR 467
>gi|308234253|ref|ZP_07664990.1| cysteinyl-tRNA synthetase [Atopobium vaginae DSM 15829]
gi|328943535|ref|ZP_08241000.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
gi|327491504|gb|EGF23278.1| cysteine--tRNA ligase [Atopobium vaginae DSM 15829]
Length = 490
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 179/513 (34%), Positives = 248/513 (48%), Gaps = 81/513 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYN+ K EF ++P+ +RMYVCGPTVYD HIGNAR + FD++ R L+Y
Sbjct: 1 MLIYNSKTHKKEEFIPLEPNRVRMYVCGPTVYDQIHIGNARTFLSFDIIRRYLQYKGF-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + +N+TD+DDKII RA ++ S + + F++ R L P +PR
Sbjct: 59 AVVFAQNLTDVDDKIINRANEQGISA------DELAKTYSCAFIEQMHRFGILDPDIRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I M +IQ +I GHAY N ++ F S NYG S R++D+ + G R+
Sbjct: 113 ATAEIEHMQVMIQILIDKGHAYVADNGDVYFSVRSDHNYGVVSGRQLDDMRAGERIEVND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P EP W+SPWG+GRPGWH EC AM YLG DIHGGG DL+FP
Sbjct: 173 AKRDPFDFVLWKAAKPSEPSWDSPWGKGRPGWHTECCAMIHRYLGTPIDIHGGGQDLMFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ CA + AN W+H G L ++G KMSKS GNF T+ E+L+ +P
Sbjct: 233 HHENENAQASCAWD-KPLANYWMHAGMLRVDGEKMSKSLGNFYTLKEVLDA-------YP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
A +RL ML THYR P+DF+ +RL A L K +
Sbjct: 285 ADAVRLLMLQTHYRAPLDFSFERLNGARGTLQKLIGCVENLRWSAEQSGESGALGKAEQA 344
Query: 345 --GIIDPAVLSA---LYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FN 386
+D A + + +D N A+ A+ L + K +
Sbjct: 345 LGNAVDHAQIEFETQMDDDFNAAGALAAIFNLMAHANKYLEEAGAHPCVAPMLRCADMLC 404
Query: 387 ASAHILGIEVCKEHLNKNISIAI-------------------EKLVQERLILLKMKKFSS 427
+LGI + + + I L+ R K ++
Sbjct: 405 ELCSVLGITLAAK--TSELPAEIIDLAQKVTQQSASSCEEAARLLIMARAEARSNKDWTR 462
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD IR + G ++ED N TR K K
Sbjct: 463 ADAIRDGIAELGLMVEDTAN------GTRIKVK 489
>gi|148242769|ref|YP_001227926.1| cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|147851079|emb|CAK28573.1| Cysteinyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 511
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 168/499 (33%), Positives = 240/499 (48%), Gaps = 63/499 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ N+L + F+ ++ +Y CG TVYD H+G+AR I +DVL R L + +
Sbjct: 32 SLRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGYD 91
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV+N TDIDDKI++RA +E S + ++ +N + F D RL L P
Sbjct: 92 --VTYVQNYTDIDDKILKRAAEEGSS------MQAVSERNIEAFEIDMGRLNILPADRMP 143
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRV 179
RAT I + LI+ + G AY A+ ++ F + +YG S R +EQ+ T
Sbjct: 144 RATRCIDGIQQLIRELEAKGAAYSADGDVYFAVAKANDYGKLSGRDPNEQQQGASGRTAE 203
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++P DF LWK + EP W+SPWG GRPGWHIECSAM LG DIH GG D
Sbjct: 204 GEESRKRHPFDFALWKGAKEGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGGGD 263
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENEIAQS A+ A +W+HNG +N+ G KMSKS GNF TI LL++
Sbjct: 264 LVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS----- 317
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
+RL +L HYR+P+DFT + L A
Sbjct: 318 -GVSPMTLRLFVLQAHYRKPLDFTAEALDAAANGWKGLNSALLLGERHGEALGWSSGAGE 376
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
S+ + A+ +DLN+ + L +LAR + L
Sbjct: 377 LSSELEEQRQRFIEAMDDDLNSSGGLAVLFELARPLRALANRLERGDAITADDQGLAGQW 436
Query: 384 -IFNASAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ A LG+ E+ + + I L++ R K + AD IR +L+++G
Sbjct: 437 QLLQDLAGALGLATEITAPSSDGDDGARISDLIEARKSAKANKDYGEADRIRAELKAEGI 496
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
L D +T W +
Sbjct: 497 ELIDKPGG-----ITDWIR 510
>gi|319952072|ref|YP_004163339.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
gi|319420732|gb|ADV47841.1| cysteinyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
Length = 493
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 154/492 (31%), Positives = 229/492 (46%), Gaps = 53/492 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +K+YN+L + F +I I MYVCGPTVY H+GN R + FD+++R ++
Sbjct: 7 QHLKVYNSLTGQKEPFTSIHEGAIGMYVCGPTVYSNVHLGNCRTFMSFDMIFRYFKHLGY 66
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD +DKI ++AR E + + T F
Sbjct: 67 --KVRYVRNITDAGHLENDAEDGEDKIAKKARLERIE------PMEVVQRYTVDFHNILQ 118
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
+ L P+ +P AT HI + I +I+ I+ G AYE N + FD + NYG S RK
Sbjct: 119 KFNFLPPSIEPTATGHIIEQIEIIKEILEKGFAYEVNGSVYFDVPKFNETHNYGKLSGRK 178
Query: 170 IDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
+++ + + K +P DF LWK++ P W SPWG G PGWH+EC+AMS+ YL
Sbjct: 179 LEDMIANTRELAAQDDKHSPQDFALWKKAEPQHIMRWPSPWGDGFPGWHLECTAMSTKYL 238
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G+ FDIHGGG+DL FPHHE EIAQ+ ++ + N W+H L L G+KM+KS GN I
Sbjct: 239 GETFDIHGGGMDLKFPHHECEIAQAEASNGVSP-VNYWLHANMLTLNGKKMAKSTGNNIL 297
Query: 288 INELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
+E+ +++ V+R M+ HY +D + L +E K +
Sbjct: 298 PDEIFSGTNPLLSKAFTPTVVRFFMMQAHYTSILDLSNDALLASEKGFLKLMEALNTIHK 357
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---- 389
A+ +D NT + I L + + + +
Sbjct: 358 LETNSSSDFDFNAWQQKCYDAMNDDFNTPTLIAHLFEAVKHINAIKEGKESISEMDKALL 417
Query: 390 ---------HILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
ILG+E + + +S + L+Q R K F+++D IR QL
Sbjct: 418 NNTFNAFIFDILGLEDKNDANSDTDKLSGVVALLIQLRKEARDNKDFATSDIIRDQLAEL 477
Query: 439 GFILEDYKNPDN 450
G L+D K
Sbjct: 478 GIQLKDGKEGTT 489
>gi|312874864|ref|ZP_07734883.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
gi|325912411|ref|ZP_08174806.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
gi|311089609|gb|EFQ48034.1| cysteine--tRNA ligase [Lactobacillus iners LEAF 2053A-b]
gi|325475753|gb|EGC78924.1| cysteine--tRNA ligase [Lactobacillus iners UPII 143-D]
Length = 470
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 174/490 (35%), Positives = 254/490 (51%), Gaps = 62/490 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + I+E + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGRLSGQNIEELEEGASQHVSVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R M YR+PI++T L +AE +L ++ +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIQERLSEKNDVSDS 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNA 387
++A+ +D N +A+ +H+L+ D + + +
Sbjct: 345 DLAERLIDAKKKFIAAMDDDFNVQNALSVMHELSLHVNVHLNNDFIDHKNLQDFVQLMDE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+++ E N ++KLV +R + + K ++++D IR +L +KG ILED
Sbjct: 405 WLLIFGVKITTEMEN---DDTVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT-- 459
Query: 448 PDNGQRMTRW 457
+ TRW
Sbjct: 460 ----PQGTRW 465
>gi|83950345|ref|ZP_00959078.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
gi|83838244|gb|EAP77540.1| cysteinyl-tRNA synthetase [Roseovarius nubinhibens ISM]
Length = 465
Score = 353 bits (905), Expect = 4e-95, Method: Composition-based stats.
Identities = 202/463 (43%), Positives = 262/463 (56%), Gaps = 29/463 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY--- 60
+IK++N+ R F +DP N+RMYVCGPTVYD AH+GNARP++VFD+LYRLLR+
Sbjct: 8 EIKLHNSRSRTKEVFTPLDPQNVRMYVCGPTVYDRAHLGNARPVVVFDMLYRLLRHVAKT 67
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
G VTY RN TD+DDKI RA + + I IT++ TQ F+ D L L P
Sbjct: 68 NGWGKVTYARNFTDVDDKINARA------LASDRRIEEITAETTQWFLDDMAALGALEPD 121
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H PRAT +IPQMI +I+ +I HAY A ++F S YG S R +D+ G RV
Sbjct: 122 HMPRATAYIPQMIAMIEGLIEGDHAYAAEGHVLFRVRSYKAYGGLSGRSVDDMIAGARVE 181
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S +PGWESPWG GRPGWHIECSAMS LG FDIHGGG DL
Sbjct: 182 VAPFKEDPMDFVLWKPSDATQPGWESPWGYGRPGWHIECSAMSYEILGPSFDIHGGGNDL 241
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA + A +W+HN L +EG+KMSKS GNF T+ +LL+ +
Sbjct: 242 MFPHHENEIAQSCCAHPEGEFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 295
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGIIDPAVLSALYND 358
P VIR L THYR+P+D+T ++ A+ L + G D V+ AL +D
Sbjct: 296 GIPGEVIRFVFLSTHYRKPMDWTAEKARNAKNTLDHFLGLIVGVEPGEPDDEVVLALADD 355
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-------CKEHLNKNISIAIEK 411
LNT A+ LH LA+E + AS LG ++ E ++ E+
Sbjct: 356 LNTHKALTRLHTLAKE-----KKADVLKASLLFLGFDLSTLESGWFGEEHYDGLAPLAER 410
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
L Q R + K FS D ++ L G + K
Sbjct: 411 LGQVRAAAMVSKDFSEVDRLKSALLEAGVEVRMSKEGVELVPG 453
>gi|217076406|ref|YP_002334122.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
gi|226735065|sp|B7IFB7|SYC_THEAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|217036259|gb|ACJ74781.1| cysteinyl-tRNA synthetase [Thermosipho africanus TCF52B]
Length = 469
Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats.
Identities = 165/479 (34%), Positives = 230/479 (48%), Gaps = 45/479 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I NT K E + I+P ++MYVCGPTVY++ HIGNARP +VFD R L Y
Sbjct: 1 MAIYITNTETGKKEELKTIEPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V+N TDIDDKII A + + ++ KD L A
Sbjct: 61 --KVIMVQNFTDIDDKIINEANE------WGVDFKDVADTFIAEYWKDAQSLGIRAANFH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+++ +++ ++ +I G+AY N ++ F YG S +KI++ G RV
Sbjct: 113 PRTTDYVNEIVDAVEKLISKGYAYTVENGDVYFSVKKFERYGKLSGKKIEDLISGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P DF LWK P EP W+SPWG GRPGWHIECS MS LG FDIH GG DLI
Sbjct: 173 NTLKKDPLDFALWKAVKPGEPSWDSPWGCGRPGWHIECSVMSQKLLGDTFDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE+E +QS + A W+HNG + G KMSKS GN + E + +
Sbjct: 233 FPHHEDEKSQSEALTG-KPFARYWMHNGMIITRGDKMSKSIGNVFLVREAV-------KR 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----------------LSKWPQTSTSKG 345
+ ++L +L HYR PI+F+ + + E + K P+
Sbjct: 285 YGKDAVKLFLLSKHYRTPIEFSDEIMMENKKAALKVLKTLNRFEEKYPYPKVPKRDEYMN 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAHILGIE 395
I+ + AL +D NT AI + L++E K D I ILG+
Sbjct: 345 DIEQKFVEALEDDFNTPKAIALIFDLSKELNKAMDEGKDDEALKRYHLITRVFGSILGLF 404
Query: 396 V--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
K +N + IE++++ R K K F +AD IR L + + D + +
Sbjct: 405 EGGVKISEGENTNKVIEEILKVRQEFRKAKNFEAADKIRDALLNSNVKILDTPDGTKWE 463
>gi|220930684|ref|YP_002507593.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
gi|220001012|gb|ACL77613.1| cysteinyl-tRNA synthetase [Clostridium cellulolyticum H10]
Length = 461
Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats.
Identities = 155/472 (32%), Positives = 231/472 (48%), Gaps = 41/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL R+ EF+ I+ +R+Y CGPTVY++AHIGN R + D+L R+L+Y
Sbjct: 1 MKVFNTLSRQKEEFKPINDKEVRIYSCGPTVYNYAHIGNLRTYVFMDILRRVLQYNGY-- 58
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
+ +V NITD+ +DK+++ AR++ + I T F+KD L
Sbjct: 59 SLKHVMNITDVGHLVSDEDEGEDKMVKGAREQKKT------PWEIAEYYTSVFMKDIRAL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P P+AT HIP+M+ + ++ G+ YE ++ I FD YG SR +++Q
Sbjct: 113 NIQVPEIVPKATEHIPEMLEFVHGLVDSGYGYETSDGIYFDIQKFEGYGKLSRANLEDQI 172
Query: 175 MGTRVPEKYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
G RV K++PADF LWK+ W S WG G PGWHIECSAM YLG FDI
Sbjct: 173 AGARVEVNEEKRHPADFALWKKAPKEHIMQWPSEWGMGYPGWHIECSAMGRKYLGDTFDI 232
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
H GG+D I HHENEIAQS + + N W+H F+ + KMSKS GN TI+ L E
Sbjct: 233 HTGGVDHIPVHHENEIAQSEALLK-KSAVNYWMHGEFMMVNNGKMSKSLGNTYTIDNLKE 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------PQTS 341
+ + R L HYR ++FT + A++ ++ S
Sbjct: 292 ------KGYDPMAFRYMCLNAHYRNKLNFTWDVMQSAQVSYDRFVEGVLSHKDGKEQVDS 345
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
++ +DLN A+ R K+ + + I G + K+
Sbjct: 346 AVVKEFLSDFEDSINDDLNIPKALGVAWNAIRYGKKSQAIYELLTKMNSIFGFILDKKKE 405
Query: 402 NK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ IS I +L++ER K + +D IR +L++ G+ +ED N
Sbjct: 406 STSEPEISPEIHRLLEERQEARAGKNWKRSDEIRDELKTMGYAVEDTANGPK 457
>gi|254168458|ref|ZP_04875302.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
gi|197622513|gb|EDY35084.1| cysteinyl-tRNA synthetase [Aciduliprofundum boonei T469]
Length = 455
Score = 353 bits (905), Expect = 5e-95, Method: Composition-based stats.
Identities = 177/469 (37%), Positives = 241/469 (51%), Gaps = 39/469 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY+TL + EF + + +YVCGPT YD+AHIG+ARP I+FDV R L Y +
Sbjct: 1 MKIYDTLSGEKKEFVPVHEGRVGIYVCGPTTYDYAHIGHARPAILFDVFRRFLEYMGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + NITD+DDKII +A + + + ++++KD L P+
Sbjct: 60 -VILISNITDVDDKIINKANE------LGKDPIEMAHYYAREYLKDMDALRVRRANIIPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI ++I LI+ ++ G+AYE+ ++ F +YG S RKI++ G RV
Sbjct: 113 ATRHIEEIINLIKTLVDKGYAYESGGDVYFSVKKFKDYGKLSHRKIEDMVAGARVEVNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK S P EP W+SPWG GRPGWHIECSAMS +YLG DIHGGG DLIFPH
Sbjct: 173 KRDPLDFALWKASKPGEPSWQSPWGSGRPGWHIECSAMSMNYLGPTLDIHGGGADLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A + + W+H G + E KMSKS GN I + L + +PA
Sbjct: 233 HENEIAQSEAATG-KPFSKYWMHVGLVRFEKEKMSKSIGNVFLIKDFL-------KKYPA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
V+RL L +HYR+P DF+ + + EA LL K T
Sbjct: 285 EVLRLMYLNSHYRKPYDFSEKNIEEALPLLEKIWSTYQILKNSAMQEGPSEEVEKRIEDS 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPI---FNASAHILGIEVCKEHLN 402
++++L +D NT A++ + K D L I I ++
Sbjct: 345 RKKIIASLEDDFNTREAMKEYLSFINFARELKGGDALAALNFLKEMDEIFDILPRGDNEG 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K IE L+ R K K + ADYIR +LE G +ED K
Sbjct: 405 KE-RELIELLLNVRNEERKRKNYEIADYIRNELEKIGIKIEDTKEGTKW 452
>gi|294630050|ref|ZP_06708610.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
gi|292833383|gb|EFF91732.1| cysteinyl-tRNA synthetase [Streptomyces sp. e14]
Length = 466
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 246/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R +
Sbjct: 1 MTIRLYDTSARQIRDFTPLKPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFSHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT++RN+TDIDDKII +A ++H I +N + F T L CL P+++
Sbjct: 61 E--VTFIRNVTDIDDKIITKAHEQH------RPWWSIGYENERAFNDGYTALGCLPPSYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+M+ +++ +I GHAY A+ + FD S P Y SR+++ + + +
Sbjct: 113 PRATGHVPEMVEMMRRLIERGHAYAADGNVYFDVRSFPGYLELSRQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP W +PWG GRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPTWPTPWGEGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DEFARYWVHNAWVTMAGDKMSKSLGNSVLVSEMV-------KQW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVL 352
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFIQRVVEKAGPVEPSAEVPPAFA 342
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
A+ +DL A+ +H R+ L A +LG++ E
Sbjct: 343 EAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEQWAG 402
Query: 404 N-----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 403 EGGDRGEDLHGVVDTLVRMVLDQREAARARKDWTTADAIRDQLGQSGLVIEDSPQGPRWS 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|199598530|ref|ZP_03211947.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
gi|199590572|gb|EDY98661.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
Length = 468
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 171/493 (34%), Positives = 250/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ R+ F+ + P IRMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII A + +A + + F++DTT L T P
Sbjct: 60 -KVTYVSNFTDVDDKIITAAHKTG------EAPLDLAQRFIDAFMEDTTALGIEPATAHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ IP +I +Q++I G+AY + ++ + +YG S + +DE + G
Sbjct: 113 RASQMIPDIIDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQ 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E W+SPWG+GRPGWHIECS MS+ LG FDIHGGG D
Sbjct: 173 EELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ W+HNGF+ + + +KMSKS GNFIT++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
++ V+R M T YR PI ++ L A L++ +
Sbjct: 287 --KTVDPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAVAGVDA 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ ++A+ +D+N + + L LA+ + +DLL ++A
Sbjct: 345 QITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDA 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+ N+ I+ LV+ R K F+ +D IR QL ++G ILED
Sbjct: 405 WLQIFGVVFTDPT---NLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 460 ----PQGTRWRRK 468
>gi|227489407|ref|ZP_03919723.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227090585|gb|EEI25897.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51867]
Length = 451
Score = 352 bits (904), Expect = 5e-95, Method: Composition-based stats.
Identities = 155/473 (32%), Positives = 240/473 (50%), Gaps = 41/473 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+IY++ R + +F P + +Y+CG TV HIG+ R + FD+L L
Sbjct: 1 MTFRIYDSKTRTLQDFVPARPGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +VRN+T+IDDKI+ +A + + + + F + L P+ +
Sbjct: 61 DTA--FVRNVTNIDDKILTKAAENG------RPWWEWAATHERAFNEAYRILGVTPPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI ++I +Q II +GH Y A+ + ++I YG S ++IDE G
Sbjct: 113 PRATGHITEIIEYMQRIIDNGHGYAADGNVYATPATIEGYGELSGQRIDELDQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWHIEC+AMS+ YLG FDIH GGLDL F
Sbjct: 173 --KRDPRDFTLWKAAKPGEPSWPTPWGPGRPGWHIECTAMSTKYLGSEFDIHCGGLDLKF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A +K A W+HNG++ + G KMSKS GN +++ ++E +
Sbjct: 231 PHHENEIAQATAAG--DKFARYWMHNGWVTMSGEKMSKSLGNVLSVPNVVELVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----DPAVLSALYN 357
+R + HYR ++++ L EA + + S+G + ++AL +
Sbjct: 283 -PVELRYYLGSAHYRSMLEYSEGALHEAAVGYRRIEDFVNSQGPVTPGTLPEQFVNALDD 341
Query: 358 DLNTVSAIQALHKLAREST----KNHDLLPIFNASAHILGIEVCKEHL-------NKNIS 406
DL +A+ +H RE K +L A ILG++ E + ++
Sbjct: 342 DLGVPAALAVVHTTVREGNAHPEKAAELAGQVRAMTAILGVDPQSETWASANSDSSDALA 401
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E +Q+R + K +++AD +R L + G L+D + T WK
Sbjct: 402 KLVEVHIQQRQKAREEKDWATADAVRDTLAAAGIELKDGAD------GTTWKV 448
>gi|148909295|gb|ABR17747.1| unknown [Picea sitchensis]
Length = 602
Score = 352 bits (904), Expect = 6e-95, Method: Composition-based stats.
Identities = 186/510 (36%), Positives = 264/510 (51%), Gaps = 75/510 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + I+NT+ +K F+A +P + MYVCG T YD++HIG+AR + FD+LYR L+
Sbjct: 102 ETDLYIFNTMSKKKELFKAREPGKVGMYVCGVTAYDYSHIGHARVYVTFDILYRYLQRLG 161
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YVRN TDIDDKII RA + + ++++ ++F D L CL P+
Sbjct: 162 YE--VKYVRNFTDIDDKIISRAN------DLGENPLSLSNRFCKEFQVDMAELNCLPPSV 213
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T+HI Q+I +IQ I+ +G+AY N ++ F P YG S RK+D+ + G R+
Sbjct: 214 EPRVTDHINQIIEMIQQILRNGYAYVVENGDVYFSVDKYPKYGCLSGRKLDDNRAGERIA 273
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+ +LG FDIHGGG+DL
Sbjct: 274 VDSRKQNPADFALWKSAKPSEPFWDSPWGPGRPGWHIECSAMSAAHLGYCFDIHGGGVDL 333
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA + WIHNGF+ ++ KMSKS GNF TI E+LE+
Sbjct: 334 IFPHHENEIAQS-CASCNDSNVPYWIHNGFVTVDAEKMSKSLGNFFTIREVLES------ 386
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-------------- 346
+ +RL + THYR ++++ +L A L QT
Sbjct: 387 -YHPLALRLFLSGTHYRSQLNYSKSQLENASERLFYIYQTLKDCEECLSGHVRQSIGQPI 445
Query: 347 ----------IDPAVLSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNAS 388
I A S++ NDL+ A+ AL + + + L F S
Sbjct: 446 PEDIQKRINNIHNAFSSSMSNDLHIAMALDALSEPLKIMNDLMFTRQGRKQKLRMEFLDS 505
Query: 389 AHI--------LGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSA 428
+ LG+ EV + +K + + + +++R K +S +
Sbjct: 506 LEVKTRDLLSDLGLMSPSYSEVLLQLKSKALRRAGITEDEVLQAIEKRADARAAKNYSES 565
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D IR++L G L D T W+
Sbjct: 566 DRIRRKLAVLGIALMD------EPSGTTWR 589
>gi|327312789|ref|YP_004328226.1| cysteine--tRNA ligase [Prevotella denticola F0289]
gi|326946352|gb|AEA22237.1| cysteine--tRNA ligase [Prevotella denticola F0289]
Length = 495
Score = 352 bits (904), Expect = 6e-95, Method: Composition-based stats.
Identities = 163/501 (32%), Positives = 231/501 (46%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I ++ MYVCGPTVY H+G+ARP I FD+L+R LR+
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD S R
Sbjct: 113 RALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ + +R K N ADF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NLTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DLIFPHHE EIAQ+ + ++ W+HN + + G+KM KS GNFI
Sbjct: 233 LGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T+ + + + + IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGRHETLMQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLA 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
T A+ +DL T + I L +
Sbjct: 352 RIQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISAD 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L + GF ++D K+ +
Sbjct: 472 RDALSAAGFQVKDTKDGVTWK 492
>gi|288925853|ref|ZP_06419783.1| cysteine--tRNA ligase [Prevotella buccae D17]
gi|288337277|gb|EFC75633.1| cysteine--tRNA ligase [Prevotella buccae D17]
Length = 496
Score = 352 bits (904), Expect = 6e-95, Method: Composition-based stats.
Identities = 152/501 (30%), Positives = 226/501 (45%), Gaps = 59/501 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++ + IYNTL R F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E + T ++
Sbjct: 61 GY--KVRYVRNITDVGHMEHDADDGDDKIEKKARLEQLE------PMEVAQYYTNRYHTA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P+AT HI + L++ I+ +G+AYE+N I FD
Sbjct: 113 MNALNVLPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R + + K++ ADF LWKR+ P W SPW G PGWH EC+AM
Sbjct: 173 RSLENIVNESRSLTGVGEKRHQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE EIAQ+ + ++ W+HN + + G+KM KS GNF
Sbjct: 233 YLGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DQMVRYWMHNNMITINGQKMGKSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----- 339
IT+ + +++ IR +L HYR +DF+ L +E L +
Sbjct: 292 ITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDFSNDALKASEKGLERLMNGLSDL 351
Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-- 385
T + A+ +D T I L + D
Sbjct: 352 DRVPVSDTCDEATDQFVKQLRQRCYDAMNDDFQTQLVISYLFEACHVVNTLLDHKAHICT 411
Query: 386 -----------NASAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADY 430
+ +LG++ N+ A ++ ++ R K ++++D
Sbjct: 412 DCLKELSETMRLFAFDLLGLKPENGDNNEAREEAYGKVVDMVLSLRSKAKADKDWTTSDK 471
Query: 431 IRKQLESKGFILEDYKNPDNG 451
IR L GF ++D K+
Sbjct: 472 IRDALADAGFEVKDTKDGVTW 492
>gi|126726937|ref|ZP_01742776.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
gi|126703895|gb|EBA02989.1| cysteinyl-tRNA synthetase [Rhodobacterales bacterium HTCC2150]
Length = 464
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 198/462 (42%), Positives = 257/462 (55%), Gaps = 22/462 (4%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+IK+YNT RK F +D +++RMYVCGPTVYD AHIGNARP+IVFDVLYRLLR YG
Sbjct: 3 EIKLYNTATRKKGVFTPLDTNDVRMYVCGPTVYDRAHIGNARPVIVFDVLYRLLREVYGI 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V Y RN TD+DDKI A + + + I T + ++ D L + P
Sbjct: 63 EHVKYARNFTDVDDKINATAASRKAAGAKGTLEELIQERTDETIAWYLDDMRSLGNIDPD 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT I QMI + +I GHAY A ++F S NYG+ S R +D+ G RV
Sbjct: 123 FAPRATEFIDQMIEMNSELIGKGHAYAAEGHVLFAVDSYKNYGALSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K+NP DF+LWK S PGWESPWGRGRPGWHIECSAM+ G+ FDIHGGGLDL
Sbjct: 183 VAPYKRNPMDFVLWKPSDAETPGWESPWGRGRPGWHIECSAMARELFGERFDIHGGGLDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE+AQS E A +W+HN L +EG+KMSKS GNF ++ ELL+ +
Sbjct: 243 AFPHHENELAQSKACCGDESFAQVWMHNEMLQVEGKKMSKSLGNFFSVRELLD------Q 296
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLSALYN 357
+ V R L THYR+P+D+T ++ EAE L KW S +V++AL +
Sbjct: 297 GYSGEVARFVYLSTHYRKPMDWTDKKAREAEATLRKWRALSAGIEPASRAGASVVAALAD 356
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT AI LHKLA ASA +LG+ + + ++S KL
Sbjct: 357 DLNTPGAIAELHKLASSG-----KAAELKASALLLGLLQDDMGDWADVVAVDLSAFEAKL 411
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R + K F+ D ++K G + K +
Sbjct: 412 SDVRDAAMVSKDFAEVDRLKKAFTDAGLEVRMSKQGVDLIAG 453
>gi|113954599|ref|YP_730137.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|113881950|gb|ABI46908.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 498
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 173/516 (33%), Positives = 241/516 (46%), Gaps = 79/516 (15%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ N+L + F+ ++P +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSSLRFTNSLTSRTEAFEPLEPGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTY++N TDIDDKI+ RA +E + + ++ +N + F D RL L
Sbjct: 61 YD--VTYIQNYTDIDDKILNRASEEGST------MQAVSERNIEAFEIDMGRLNILPADR 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GT 177
PRAT I + LI + G AY ++ ++ FD S +YG S R +EQ+ T
Sbjct: 113 MPRATCCIEGIQTLIAELETKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRT 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
E+ KK+P DF LWK S EP W+SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 ADGEESRKKHPFDFALWKGSKVGEPSWDSPWGPGRPGWHIECSAMVRQELGLTIDIHLGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENEIAQS A+ A +W+HNG +N+ G KMSKS GNF TI LLE+
Sbjct: 233 GDLVFPHHENEIAQSETANGA-PLARLWMHNGMVNVGGTKMSKSLGNFTTIRALLES--- 288
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------- 337
A +RL +L HYR+P+DFT + L +
Sbjct: 289 ---GLSAMALRLFVLQAHYRKPLDFTAEALEASTTGWKGLNAALKLGETHAAALEWSDHT 345
Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
++ +A+ +DLN+ A+ L +LAR + L
Sbjct: 346 ALSNAAVQAGRNAQGPFEDLEQRFTAAMDDDLNSSGALAVLFELARPLRGLANRLDRGDQ 405
Query: 384 ----------------IFNASAHILGI-----EVCKEHLNKNISIAIEKLVQERLILLKM 422
+ A +LG+ E + + AIE+ + R +
Sbjct: 406 PEQPGEELTQLHSRWLLLRELAAVLGLRSETDESQPSENSGVDAQAIEQAIANRKAAKQE 465
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K + AD IRK L +G L D T W+
Sbjct: 466 KNYQEADRIRKSLSDQGIELIDKPGGL-----TDWR 496
>gi|269217196|ref|ZP_06161050.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
gi|269129333|gb|EEZ60418.1| cysteine--tRNA ligase [Slackia exigua ATCC 700122]
Length = 503
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 172/512 (33%), Positives = 245/512 (47%), Gaps = 79/512 (15%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++Y+T +F ++ IRMYVCGPTVY++ HIGNAR I FDV+ R L +
Sbjct: 1 MPMIRLYDTQSHAKRDFHPVEEGKIRMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VT+V+N+TD+DDKII++A +E S + + ++ T+ F+ D L P
Sbjct: 61 FD--VTFVQNVTDVDDKIIKKANEEGRSA------AEVAAEYTEAFIADMHAAGVLDPDI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT I MI L+ ++ GHAYE ++ F S P YG+ S R +D+ + G R
Sbjct: 113 RPRATEEIDAMIDLVGRLVDAGHAYEVEGDVYFGVRSFPAYGALSNRNVDDLEGGHRELR 172
Query: 182 KYHKKNPA------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ DF +WK + P EP W+SPWG+GRPGWHIECSAMS YLG DIHG
Sbjct: 173 ADGQGLEGRKRDELDFAVWKAAKPGEPSWDSPWGKGRPGWHIECSAMSRMYLGLPLDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL+FPHHENEIAQS A E N W+H G L + KMSKS GNF+ + ++L
Sbjct: 233 GGSDLVFPHHENEIAQSEAAYG-ETFCNYWMHGGMLQINQEKMSKSLGNFLLLRDVL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS-- 353
++ A V+R+ ML THYR P+DF +RL EA L + + +
Sbjct: 289 ----KTTDARVLRMLMLQTHYRSPLDFNDERLDEAASSLERVENFIDRMDWLVKHPVEGE 344
Query: 354 --------------------ALYNDLNTVSAIQALHKLAREST--------------KNH 379
A+ +D NT A+ AL +
Sbjct: 345 GIGTQAFSVPLQALREGFVAAMDDDFNTAGALGALFSCINDVNAALGTASLGRGDIEAAS 404
Query: 380 DLLPIFNASAHILGIEVCKEHLN---------------------KNISIAIEKLVQERLI 418
D + GI+V + + A+E L++ R
Sbjct: 405 DARDAVVELFGVFGIDVPGRATDAQDAYPAEVVALAREIASFEGDDAQAAVEALLETRAQ 464
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
K ++ AD +R + + GF++ED
Sbjct: 465 ARASKMWAVADAVRDGMGALGFVIEDTPQGAK 496
>gi|229552880|ref|ZP_04441605.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
gi|258540510|ref|YP_003175009.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
gi|229313749|gb|EEN79722.1| cysteine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
gi|257152186|emb|CAR91158.1| Cysteinyl-tRNA synthetase [Lactobacillus rhamnosus Lc 705]
Length = 468
Score = 352 bits (903), Expect = 6e-95, Method: Composition-based stats.
Identities = 170/493 (34%), Positives = 250/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ R+ F+ + P IRMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII A + +A + + F++DTT L T P
Sbjct: 60 -KVTYVSNFTDVDDKIITAAHKTG------EAPLDLAQRFIDAFMEDTTALGIEPATAHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ IP ++ +Q++I G+AY + ++ + +YG S + +DE + G
Sbjct: 113 RASQMIPDIVDFVQDLIAKGYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQ 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK + P E W+SPWG+GRPGWHIECS MS+ LG FDIHGGG D
Sbjct: 173 EELDKKEDPIDFALWKAAKPGEISWDSPWGKGRPGWHIECSVMSTQLLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ W+HNGF+ + + +KMSKS GNFIT++++L
Sbjct: 233 LEFPHHENEIAQSEAKTG-KQFVRYWMHNGFVTIGEDDQKMSKSLGNFITVHDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------- 343
++ V+R M T YR PI ++ L A L++ +
Sbjct: 287 --KTVDPQVLRFFMAGTQYRMPIRYSEANLKNAANSLNRLKIARENLVYRRANAADGVDA 344
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
+ ++A+ +D+N + + L LA+ + +DLL ++A
Sbjct: 345 QITAELKTLKDRFIAAMDDDVNVQNGLTVLFDLAKLLNEYANEDTVKQESVNDLLNQYDA 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+ N+ I+ LV+ R K F+ +D IR QL ++G ILED
Sbjct: 405 WLQIFGVVFTDPT---NLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TRW++K
Sbjct: 460 ----PQGTRWRRK 468
>gi|197103884|ref|YP_002129261.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
gi|229470556|sp|B4RE90|SYC_PHEZH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|196477304|gb|ACG76832.1| cysteinyl-tRNA synthetase [Phenylobacterium zucineum HLK1]
Length = 470
Score = 352 bits (903), Expect = 7e-95, Method: Composition-based stats.
Identities = 178/486 (36%), Positives = 263/486 (54%), Gaps = 47/486 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+Y+T+ R +F DP + MYVCGPTVY++AHIGN RP++VFD+L+R+LR YG
Sbjct: 1 MTLKLYDTMTRAKRDFVPSDPERVTMYVCGPTVYNYAHIGNFRPVVVFDLLFRVLRALYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V Y N+TD+DDKI +A +E I ++ + + D L LAPT Q
Sbjct: 61 EDHVLYAANVTDVDDKINRKAAEEGV------PIGVVAERYLAAYNADARALGALAPTFQ 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ T + ++ +I ++ +G AY A ++F T + P+YG S R +++ G RV
Sbjct: 115 PKVTETMDAIVGMIGRLVDNGAAYAAEGHVLFSTEAFPDYGKLSGRPLEDLIAGARVDVA 174
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+KK+P DF+LWK S P EP WESPWG GRPGWHIECSAM LG DIHGGG+DL+F
Sbjct: 175 PYKKDPRDFVLWKPSKPGEPEWESPWGPGRPGWHIECSAMIEEALGLPIDIHGGGIDLVF 234
Query: 243 PHHENEIAQSCCADRIE----KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
PHHENE+AQ CA A W+HNGFLN+ KMSKS GN ++LL
Sbjct: 235 PHHENELAQGVCAAHPHGHGQTYARYWLHNGFLNMAEEKMSKSVGNVALAHDLL------ 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDP 349
++WP +R A+L YR+P+++T + +A+ L + + +DP
Sbjct: 289 -KTWPGEALRWALLSGQYRQPLEWTDTLIEQAKSALDRLYRVLDDAARPGDAAAEPFVDP 347
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKN---HDLLPI------FNASAHILGIE----- 395
V +AL++DLNT +A+ AL +++ E D + SA+++G
Sbjct: 348 RVEAALHDDLNTPAAMAALFQISDELRSAIMRKDAAAVAEGRGRLVGSANLMGFLAQAPQ 407
Query: 396 -VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ ++++ +E L+ +R K + AD IR +L + + D G
Sbjct: 408 AWFQSGADEDLKARVEDLLAQRQAARAAKDWPRADQIRAELAALNVEVMD------GPSG 461
Query: 455 TRWKQK 460
W+ K
Sbjct: 462 ATWRIK 467
>gi|149280305|ref|ZP_01886427.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
gi|149228994|gb|EDM34391.1| cysteinyl-tRNA synthetase [Pedobacter sp. BAL39]
Length = 486
Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 232/501 (46%), Gaps = 58/501 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL RK F+ ++ N+ +YVCGPTVY H+GN R I FD+++R L+Y
Sbjct: 1 MNTGLQLYNTLTRKKEVFEPLNAPNVGLYVCGPTVYSDVHLGNCRTFISFDLIFRYLKYS 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK +RA+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKRAKLEQLE------PMEIVQKYTLGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
L P+ +P AT HI + I +I+ II +G+AYEA+ + FD S NY +
Sbjct: 113 LRMFNTLPPSIEPTATGHIIEQIEMIKEIISNGYAYEADGTVYFDVEKYSKSYNYTILTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
R +++ TR +K DF LW K W SPWG G PGWHIECSAMS+
Sbjct: 173 RNLEDMLANTRELGGQDQKRGRLDFALWIKAKPETLMRWASPWGEGFPGWHIECSAMSAK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL HH NEIAQS + A W+H L + G +MSKS GN
Sbjct: 233 YLGEEFDIHGGGMDLAATHHTNEIAQSEACSHKQP-AKYWMHTNMLTVNGARMSKSAGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+L + + + ++ ML HYR +DF+ + L +E + +
Sbjct: 292 FLPEQLFKGDHVLLEKGFSPMTVKFFMLQAHYRSTLDFSNEALDASEKGFRRLMNAVSLL 351
Query: 345 GI-------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS--- 388
I + A+ +D N+ I L + R +D +A+
Sbjct: 352 DKLVPSEASDFDIRPIAENCVKAMNDDFNSPVVIAELFEAVRIINTVYDGKGRISAASLE 411
Query: 389 ----------AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
I G++ ++ N ++ ++ ++ R + K ++++D IR L+S
Sbjct: 412 ELKKLMNDFVFEIFGLK-DEDSSNVELNSVLDMVIDLRKTAKENKDYATSDKIRLGLQSM 470
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G L+D K T W +
Sbjct: 471 GIQLKDSK------EGTTWSK 485
>gi|229083409|ref|ZP_04215757.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699842|gb|EEL52479.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 440
Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats.
Identities = 169/464 (36%), Positives = 240/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y E V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I I+ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ + T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLTFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTS------------------TSKGIIDPAVL---SALYNDLNTVSAIQ 366
L + I+ L A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLVEIEKFQLAFEEAMNDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ LA + + + F ILG+E+ KE L + IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKVVIEAYVKQFETLFGILGLELTKEEL---LDEEIEALIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439
>gi|299067219|emb|CBJ38416.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum CMR15]
Length = 465
Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats.
Identities = 174/499 (34%), Positives = 251/499 (50%), Gaps = 75/499 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + I +T++ +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETIGTLTNRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT ++PQM+ +I + +G AY+ A+ ++ + P YG S + +++ + G RV
Sbjct: 112 REPRATEYVPQMLSMIGKLQHNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGAHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A+ N W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 232 GADLQFPHHENEIAQSEGANG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEAQARPDWNE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEH--- 400
A+++D NT A+ L +LA E K L A ++G+ V H
Sbjct: 344 PHGKRFREAMHDDFNTPVAMAVLFELATEINKTRSPALASQLAALGGVMGLLVRDPHAFL 403
Query: 401 -------LNKNISIAIEKLVQ-------------ERLILLKMKKFSSADYIRKQLESKGF 440
+ + +E ++ D IR L + G
Sbjct: 404 QGGVGAAADGLDTAEVETRIEARRAAKAARDFARA-------------DGIRADLLAAGI 450
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED +T W++
Sbjct: 451 VLEDKPGG-----VTEWRR 464
>gi|326778447|ref|ZP_08237712.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326658780|gb|EGE43626.1| cysteinyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 466
Score = 352 bits (903), Expect = 8e-95, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 248/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++T R+I +F + + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSAEQG------RPWWSIGYENERAFNDGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI +++ +I GHAYEA+ + FD S+P Y + S +++D+ + + +
Sbjct: 113 PRATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DL+F
Sbjct: 172 TGKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HNG++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQATAYG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPAGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|303232418|ref|ZP_07319110.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
gi|302481502|gb|EFL44570.1| cysteine--tRNA ligase [Atopobium vaginae PB189-T1-4]
Length = 508
Score = 352 bits (902), Expect = 8e-95, Method: Composition-based stats.
Identities = 176/529 (33%), Positives = 246/529 (46%), Gaps = 94/529 (17%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYN+ K EF + +RMYVCGPTVYD HIGNAR + FD + R L+Y E
Sbjct: 1 MMLIYNSQTHKKEEFIPAEKGRVRMYVCGPTVYDQIHIGNARTFLSFDTIRRYLQYKGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + +N+TD+DDKII RA + S I ++ F++ R L P +P
Sbjct: 61 --VVFAQNLTDVDDKIINRANENGVEA------SEIARTYSRAFIEQMHRFNILDPDIRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I M +IQ +I + AY N ++ F S +YG+ S R +D+ + G RV
Sbjct: 113 RATQEIHAMQTMIQTLIANKCAYVADNGDVYFSVRSDASYGTVSGRNLDDLRAGERVEVN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWH EC AM HYL DIHGGG DL+F
Sbjct: 173 DAKRDPFDFALWKAAKPGEPAWDSPWGAGRPGWHTECCAMIHHYLDAPIDIHGGGQDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS CA + A+ W+H G L ++G KMSKS GNF T+ ++L+T +
Sbjct: 233 PHHENENAQSVCAW-SQPLAHYWMHTGMLRVDGEKMSKSLGNFYTLKDVLDT-------Y 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------ 344
A +RL ML THYR P+DF+ +RL A+ L++ +
Sbjct: 285 SADEVRLLMLQTHYRAPLDFSFERLKGAQGTLARIKSCVKNLRWAAEHDSEDAGVGVGVG 344
Query: 345 ----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+ + +D N A+ A+ L + K D
Sbjct: 345 ADGDADAADAALEFDSAFGRTIDKAQIEFVQQMDDDFNAAGALAAIFNLVAAANKYLDAA 404
Query: 383 PI-------------FNASAHILGIEVCKE------------------HLNKNISIAIEK 411
+LGI + + + +I A E
Sbjct: 405 GAHPSVALALRAADMLCELCGVLGIALTRPVQQDLPSELLDVARELAGYEGNDIDAAQEA 464
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
L+ R K ++ AD IR ++ + G ++ED TR K+K
Sbjct: 465 LLSARATARSNKDWARADAIRDKISALGLVVEDT------AAGTRIKRK 507
>gi|220921630|ref|YP_002496931.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
gi|219946236|gb|ACL56628.1| cysteinyl-tRNA synthetase [Methylobacterium nodulans ORS 2060]
Length = 460
Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats.
Identities = 208/482 (43%), Positives = 277/482 (57%), Gaps = 51/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R F ID N+RMY CGPTVYD AHIGN RP+IVFD+L+RLLR+
Sbjct: 1 MAPLLRLYNTLTRAKEPFAPIDAGNVRMYACGPTVYDAAHIGNGRPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL--- 117
YGE VTYVRN+TD+DDKI RA + S I +T + F D RL L
Sbjct: 61 YGEGAVTYVRNVTDVDDKINARAAERGIS------IRALTDETLAAFHADLRRLGVLMPE 114
Query: 118 --------APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT HI +M +I+ ++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGQRPVFIEPRATEHIREMAMMIERLVAAGHAYVAEEHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S P EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMEAGARVDVAPYKRSPLDFVLWKPSKPNEPAWPSPCGIAAPGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GG+DL+FPHHENE+AQS C AN+W+HNGFL +EG KMSKS GNF+
Sbjct: 235 LGETFDIHAGGIDLVFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGDKMSKSLGNFV 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG- 345
T+ E+L WP V+RLAML THYR+PID+T++ L EA + +W +T G
Sbjct: 295 TLREVLAD-------WPGEVVRLAMLRTHYRQPIDWTLRALEEASRTIDRWYETVGDTGP 347
Query: 346 --IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-------- 395
+ A+ AL +DLNT SA+ LH+L D A A ++G
Sbjct: 348 AAEVPAALRDALLDDLNTPSALGELHRL--------DDPAALKAGAMLMGFLGSTRSARA 399
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ +E+L+ ER + ++ +D +R L + G L+D K+ T
Sbjct: 400 QAAVAASGVDVATVERLIAERKAARAARNWAESDRLRDALAAMGVTLKDNKDGT-----T 454
Query: 456 RW 457
W
Sbjct: 455 TW 456
>gi|6899996|emb|CAB71305.1| cysteinyl tRNA synthetase [Clostridium sticklandii]
Length = 443
Score = 352 bits (902), Expect = 9e-95, Method: Composition-based stats.
Identities = 174/464 (37%), Positives = 250/464 (53%), Gaps = 55/464 (11%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY+F HIGNARP ++FD + Y E VTYV+N TD+DDKII+RA +E
Sbjct: 1 MYVCGPTVYNFFHIGNARPFMIFDAFRNYMEYRGYE--VTYVQNFTDVDDKIIKRANEEG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
S + K ++ KD L T PR T +I +I I+++I G AYE
Sbjct: 59 IS------PIEVAEKYIAEYFKDADALGIKRATVHPRVTENIENIITFIEDLISKGFAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
N ++ F++ + YG S++ ++E +G R+ KK+P DF LWK E GW+SP
Sbjct: 113 LNGDVYFNSQAYKEYGKLSKQNLEELNLGARIDVNDEKKHPIDFALWKAKKEGEIGWQSP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG GRPGWHIECS MS+ YLG DIH GG DLIFPHHENEIAQS ++ A W+H
Sbjct: 173 WGEGRPGWHIECSVMSARYLGDTIDIHAGGQDLIFPHHENEIAQSEARSG-KQFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N++ +KMSKS GNF T+ ++L + VIR +L HYR P++F+ + +
Sbjct: 232 NGYINVDNQKMSKSLGNFFTVRDILS-------EFSGQVIRFFLLSAHYRNPVNFSKELI 284
Query: 328 TEAEILLSKWPQTSTSK----------------------GIIDPAVLSALYNDLNTVSAI 365
+A+ + + + + A+ +D+NT AI
Sbjct: 285 LQAKAGMERLANSKERLVFTISHAKGQMNESELELVSALENHRDRFIEAMDDDINTADAI 344
Query: 366 QALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
+ +LAR S N L +FN +L I + E + N + IEKL+++
Sbjct: 345 SIIFELARFSNTNVTENSSLEWAEKNLSLFNELTGVLNI-IKAEDTDSNDNEQIEKLIKD 403
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K K F+ AD IR +L+S G +ED + + T+WK+
Sbjct: 404 RVEAKKNKDFALADAIRDELKSMGIEIEDTR------QGTKWKK 441
>gi|307704342|ref|ZP_07641259.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
gi|307622102|gb|EFO01122.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK597]
Length = 423
Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats.
Identities = 150/442 (33%), Positives = 220/442 (49%), Gaps = 36/442 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ H+GNAR + FD + R Y E V Y+ N TD+DDKII RA++E
Sbjct: 1 MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEEG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + +K F +D T L T PR + +I ++ +I G AYE
Sbjct: 59 IT------PQEVANKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEELIEKGFAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGW 204
+ ++ F NY + + +++ ++G + + LWK + P E W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKPGEISW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+SPWG GRPGWHIECS MS+ LG DIHGGG DL FPHH NEIAQS + AN
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+HNGF+N++ KMSKS GNFIT+++ L ++ V+R HYR+PI+FT
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDAL-------KTIDGQVLRFFFATQHYRKPINFTE 284
Query: 325 QRLTEAEILLSKWPQTSTS----------KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ + +AE L T ++A+ D N + I + ++A+
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGNVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKW 344
Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ + A + GI +E + IE L+Q+R + F++AD I
Sbjct: 345 INSGNYDASVKEALAAMLEVFGIVFIEE----VLDAEIETLIQKRQEARANRDFATADQI 400
Query: 432 RKQLESKGFILEDYKNPDNGQR 453
R QL ++G L D K+ R
Sbjct: 401 RDQLAAQGIKLLDTKDGVRWTR 422
>gi|302559960|ref|ZP_07312302.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
gi|302477578|gb|EFL40671.1| cysteinyl-tRNA synthetase [Streptomyces griseoflavus Tu4000]
Length = 466
Score = 352 bits (902), Expect = 1e-94, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 244/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT++RN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 60 -LAVTFIRNVTDIDDKIIAKSAEQG------RPWWSIGFENERAFTNGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA+ + F +S P Y S +++ + + +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFAVASFPEYLELSNQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAYG--DEFARYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPVVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGVVEPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +D+ A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDMGVPQALAVVHTTVRQGNSALAADDKEEAVARLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KNIS------IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
A++ L + +R K + +AD IR QL G ++ED
Sbjct: 403 GESDRGQDLHGAVDTLVRMVLDQREAARARKDWPTADAIRDQLNQSGLVIEDGPQGPRWS 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|228912829|ref|ZP_04076476.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228943896|ref|ZP_04106281.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228815729|gb|EEM61965.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228846765|gb|EEM91770.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 440
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 166/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I IQ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ F T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTSTS---------------------KGIIDPAVLSALYNDLNTVSAIQ 366
L + + A A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ +A + + + ILG+E+ +E L + IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILEDT------AQGTRWKR 439
>gi|332826849|gb|EGJ99649.1| cysteinyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
Length = 489
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 159/496 (32%), Positives = 244/496 (49%), Gaps = 53/496 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ +YNTL R F+ + ++ MYVCGPTVY AH+G+AR + FD+L+R L++
Sbjct: 1 MEQKLSVYNTLTRTKEVFEPLHAPHVGMYVCGPTVYSDAHLGHARHGVTFDLLFRYLQHI 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++AR E + + ++ K
Sbjct: 61 GY--KVRYVRNITDVGHLENEEGSGEDKISKKARLEQLE------PMEVVQYYSNRYHKV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L L P+ +P A+ HI + I I+ I+ +G+AYE+N + FD S
Sbjct: 113 MDDLNTLPPSIEPHASGHIIEQIESIKEILKNGYAYESNGSVYFDVEKYNKDYDYGILSH 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I+E TR + +K+ DF LWK++ P W SPW G PGWH+ECS MS
Sbjct: 173 RNIEEMLNTTRELDGQDEKHSKVDFALWKKAAPEHIMRWPSPWSDGFPGWHLECSTMSIK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLGK FDIHGGGLDL+FPHHE EIAQ+ A + W+HN + + G+KM++S GNF
Sbjct: 233 YLGKEFDIHGGGLDLMFPHHECEIAQNT-AMEKHQVVKYWMHNNMITIAGQKMARSLGNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
IT+ +L +++ +R +L HYR +DF+ + L AE L + +
Sbjct: 292 ITLEQLFAGNHDLLEKAYSPMTVRFFILQAHYRSTVDFSNEALQAAEKSLERLLDSYGRL 351
Query: 345 GI-------------IDPAVLSALYNDLNTVSAIQALHKLARESTKN------------H 379
I A+ +D+N+ I L + +
Sbjct: 352 DKVAISDTSSVDVKSIRQKCYDAMNDDMNSAVVIAHLCEASTTINSAIAGNIKLTKEDIT 411
Query: 380 DLLPIFN-ASAHILGIEVCKEHLNKNIS--IAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+L +F+ +LGI N N + A++ L+ R + K ++++D IR +L
Sbjct: 412 ELKDVFDIFLFSVLGIRNEASLTNNNEAFGKAVDLLLDIRQKAKENKDWATSDQIRNELA 471
Query: 437 SKGFILEDYKNPDNGQ 452
GF ++D K+ +
Sbjct: 472 KAGFEIKDGKDGAEWK 487
>gi|297193591|ref|ZP_06910989.1| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
25486]
gi|297151836|gb|EDY62039.2| cysteinyl-tRNA synthetase 1 [Streptomyces pristinaespiralis ATCC
25486]
Length = 464
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 160/483 (33%), Positives = 245/483 (50%), Gaps = 48/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFAPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ + I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSADQG------RPWWSIGYENERAFNDGYEALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +M+ +++ +I GHAYEA+ + FD S P Y + S + ID+ +
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGSVYFDVRSFPEYLALSNQDIDDLRQPDEGV-- 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG+ FDIHGGGLDLIF
Sbjct: 171 SGKRDPRDFAMWKSTKPGEPSWETPWGRGRPGWHLECSAMAHKYLGEAFDIHGGGLDLIF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A+ W+HN ++ + G KMSKS GN + + E++ ++W
Sbjct: 231 PHHENEIAQAKAYGDA--FASYWVHNAWVTMSGEKMSKSLGNSVLVAEMV-------KNW 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVL 352
V+R + HYR I+++ + L EAE ++ + A
Sbjct: 282 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGPVAPAAEVPLAFA 341
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK 403
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 342 EAMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWVG 401
Query: 404 N----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++Q+R K +++AD IR QL G ++ED +
Sbjct: 402 EADRGEDLHGVVDTLVRLVLQQRESARSRKDWATADAIRDQLNQSGLVIEDGPDGPRWTL 461
Query: 454 MTR 456
R
Sbjct: 462 GPR 464
>gi|302380049|ref|ZP_07268526.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
gi|302312122|gb|EFK94126.1| cysteine--tRNA ligase [Finegoldia magna ACS-171-V-Col3]
Length = 448
Score = 351 bits (901), Expect = 1e-94, Method: Composition-based stats.
Identities = 165/464 (35%), Positives = 234/464 (50%), Gaps = 47/464 (10%)
Query: 19 QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
+ I N+ +YVCGPTVY++ H+GNARP++VFD L R Y V +V N TDIDDK
Sbjct: 1 KPIKEKNVGIYVCGPTVYNYIHVGNARPIVVFDTLRRYFIYKGY--NVKFVSNFTDIDDK 58
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQ 137
II +A+ E N IT K Q ++ + + L T P+AT +I +MI ++
Sbjct: 59 IINKAKDE------NIDFREITKKYIQAYLNNVSGLNFDEDDTIHPKATEYIDEMIKFVK 112
Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ G AY + + FD + +YG S++ ID+ + G R+ KKNP DF LWK+
Sbjct: 113 TLEDKGAAYNVDGNVYFDITKAKDYGKLSKKNIDDLRAGARIDVNSEKKNPMDFALWKKR 172
Query: 198 TPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
EP WESPWG GRPGWH+ECS MS LG DIH GG DL FPHHENEIAQS
Sbjct: 173 KEESEPAWESPWGMGRPGWHLECSVMSKSILGDTIDIHAGGEDLQFPHHENEIAQSETCT 232
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
AN W+HN + ++ KMSKS NF + ++ + + VIRL +L HY
Sbjct: 233 GAH-FANYWLHNSMITVDKEKMSKSKNNFFLLKDI-------EKEFDLEVIRLWLLSVHY 284
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------------DPAVLSALYNDL 359
R PIDF+ L + L + I A+ +D+
Sbjct: 285 RNPIDFSHDTLVATKNSLDRLYTAKKFLNRILENSSEKEEKDDNIKTFREKFEQAMDDDI 344
Query: 360 NTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIEVCKEHLNKNISIAI 409
NT AI L + KN+D + + +++LGI ++ + ++ I
Sbjct: 345 NTADAISVLFDFIKYINKNYDENTSKNILLDAKKLMDDISYVLGILFKED--DDDLDSEI 402
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
E L+++R K K F AD IR +L S G +L+D ++ +R
Sbjct: 403 EDLIEQRNAARKEKDFKKADEIRDKLLSMGIVLKDTRDGVIWER 446
>gi|229159263|ref|ZP_04287287.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624155|gb|EEK80957.1| Cysteinyl-tRNA synthetase [Bacillus cereus R309803]
Length = 440
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 166/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I IQ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ F T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTSTSK---------------------GIIDPAVLSALYNDLNTVSAIQ 366
L + + A A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ +A + + + ILG+E+ +E L + IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKIVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439
>gi|170017958|ref|YP_001728877.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
gi|226735061|sp|B1MW68|SYC_LEUCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169804815|gb|ACA83433.1| cysteinyl-tRNA synthetase [Leuconostoc citreum KM20]
Length = 469
Score = 351 bits (900), Expect = 1e-94, Method: Composition-based stats.
Identities = 163/483 (33%), Positives = 228/483 (47%), Gaps = 52/483 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F AI P + MYVCGPTVY++ HIGNAR I FDV+ R L Y
Sbjct: 1 MIHVYNTLSREKEAFHAITPGKVNMYVCGPTVYNYIHIGNARSAIAFDVIRRYLEYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+RAR+E I K Q F +DT L T +
Sbjct: 60 -VVNYVSNFTDVDDKIIQRAREEGVDE------MTIADKYAQAFDEDTIPLNIKPATTRS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP +I ++++I G+AYE+ ++ F YG + + + E +
Sbjct: 113 RATAVIPDIIAFVEDLIHKGYAYESAGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLDD 172
Query: 184 HKKNPA----DFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF +WK + E W SPWG+GRPGWHIECS M+ YL DIHGGG+
Sbjct: 173 QELTRKEDPIDFAVWKASHSSDEISWVSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS + N W+HNGF+N+ KMSKS GNF T++++L
Sbjct: 233 DLAFPHHTNEIAQSEARTG-QTFVNYWLHNGFVNVNDEKMSKSLGNFTTVHDMLAHYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
VIR + T YR PI++ L +A L + +
Sbjct: 290 ----DPMVIRYLLATTQYRRPINYAPDTLEQARAELERIRTAYRNVFFRISTAKTGHDDS 345
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
A+ +D NT +AI ++ +L + L
Sbjct: 346 VDYAIAEHISHFREAMDDDFNTQNAIASIFELVTIANNYASRDEIKLDTATRLTHAIADL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
++ G+ EHL +S + L+ +R+ ++ F+ +D +R QL G I+ED
Sbjct: 406 MNVFGVNGLSEHLT--LSAEAQALLDKRVQARAVRDFNLSDQLRDQLSDMGIIVEDTTQG 463
Query: 449 DNG 451
Sbjct: 464 QRW 466
>gi|225620434|ref|YP_002721691.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
gi|254765180|sp|C0R1J9|SYC_BRAHW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|225215253|gb|ACN83987.1| cysteinyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
Length = 474
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 168/495 (33%), Positives = 252/495 (50%), Gaps = 57/495 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K I YN+L R+ F+ I+ + + MY CGPTVY++AHIGN R I D+L R+L Y
Sbjct: 1 MKDIVFYNSLTREKEVFKPINANEVGMYSCGPTVYNYAHIGNFRAYIFSDLLRRVLEDYG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V V N+TD+DDK I+ +++ H S+ + T K + F +D L T
Sbjct: 61 Y--NVKLVMNLTDVDDKTIKNSKENHISL------NDYTKKYKEAFFEDIKTLGIKKATV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK---IDEQKMGTR 178
P AT+HI +MI +I+ + +GH YE++ + F S+ P YG + + + G
Sbjct: 113 NPAATDHIKEMINIIELLKKNGHTYESDGSVYFKISTFPQYGELANLDKQELLDGASGRV 172
Query: 179 VPEKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ ++Y K+N +DF+LWK T + W+SP+G+GRPGWHIECSAMS YLGK FDIH G
Sbjct: 173 LNDEYDKENASDFVLWKAYTEDDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D FPHHENEIAQ+ A EK N W+H L ++G KMSKS GNF T+ +LL+
Sbjct: 233 GVDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------- 347
+ IR +++ +HYR+ ++FT++ + +++ + + I
Sbjct: 289 ---KGLSPEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDLIFRLKDINNTESNEIN 345
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------PIFNASAHI 391
+ ++YNDLN A+ L L + + D + I +
Sbjct: 346 ENLLKELEVSNEKFSDSIYNDLNISEALGILFTLVKTVNTSFDSINVNTRDAILKFIERV 405
Query: 392 ------LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + N I KL++ER I K K + AD IR QL S G + D
Sbjct: 406 NNIINCFNMGDTDKKSNNEDEDKINKLIEERTIAKKEKNYQKADEIRNQLLSMGIEIMDT 465
Query: 446 KNPDNGQRMTRWKQK 460
+ +WK+K
Sbjct: 466 ------PQGVKWKRK 474
>gi|325268337|ref|ZP_08134970.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
gi|324989479|gb|EGC21429.1| cysteine--tRNA ligase [Prevotella multiformis DSM 16608]
Length = 495
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 162/501 (32%), Positives = 230/501 (45%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ ++ MYVCGPTVY H+G+ARP I FD+L+R LR+
Sbjct: 1 MQDLVIYNTLHRKKELFQPTAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLRHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD S R
Sbjct: 113 RALNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGILSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ + +R K N ADF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NLTDMINNSRELAGVGEKHNQADFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DLIFPHHE EIAQ+ + ++ W+HN + + G+KM KS GNFI
Sbjct: 233 LGEHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T+ + + + + IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGRHETLTQPYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLA 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
T A+ +DL T + I L +
Sbjct: 352 RIQASAASDGNTGKFVSAFRKKCYEAMNDDLMTPAVISELFEACHLVNILIDHKAQISAG 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMHLFAFDILGLKNERSADNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L + GF ++D K+ +
Sbjct: 472 RDALSAAGFQVKDTKDGVTWK 492
>gi|313206920|ref|YP_004046097.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
gi|312446236|gb|ADQ82591.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer DSM 15868]
gi|315023996|gb|EFT36998.1| cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-YM]
gi|325335643|gb|ADZ11917.1| Cysteinyl-tRNA synthetase [Riemerella anatipestifer RA-GD]
Length = 486
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 166/485 (34%), Positives = 229/485 (47%), Gaps = 41/485 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L + F+ I N+ MYVCGPTVY H+GN R + FD +YR L Y
Sbjct: 1 MLKIYNSLTGEKEVFKPILDRNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRTLTYLGY- 59
Query: 64 KCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
V YVRNITD DD + R S I K T F K L P
Sbjct: 60 -KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLELFNLLPP 118
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKIDEQKM 175
T +P A HI + I L Q +I G AYE+N + FD + NYG S+R I+E
Sbjct: 119 TIEPTAIGHIMEQIELTQKLIDKGFAYESNGSVYFDVKAYNEKGLNYGELSKRNIEELFA 178
Query: 176 GTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
TR + KKNP DF LWK+++P W SPWG G PGWH+EC+AMS+ YLG+ FDI
Sbjct: 179 NTRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKYLGEKFDI 238
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG+DL FPHHE EIAQ + N W+H L + G++MSKS GN+I +L+
Sbjct: 239 HGGGMDLKFPHHECEIAQGKACNGTSP-VNYWMHANMLTMNGQRMSKSTGNYILPMQLIS 297
Query: 294 T-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------- 341
F + + V+R + HYR +D + + + +E + +
Sbjct: 298 GENDFFEKPFHPSVVRFCFMQAHYRSVLDISNEAMIASEKGFQRLMEAMNVLELLSANGN 357
Query: 342 ---TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------LLPIFN 386
+ +AL +D N I L + + D L N
Sbjct: 358 NTTFNIEDWKSKCHTALLDDFNAPILIAHLFEAVKFIFALKDGKESISETDLILLKETLN 417
Query: 387 AS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+LG++ +E+ N+ + A++ L+ R K K + +D IR QL KG L+D
Sbjct: 418 RLVFDVLGLQKIEENNNEKLDQALQILINLRNEARKAKNWELSDQIRDQLLEKGIELKDG 477
Query: 446 KNPDN 450
K
Sbjct: 478 KEGTT 482
>gi|229586323|ref|YP_002844824.1| cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
gi|259511841|sp|C3PMC1|SYC_RICAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|228021373|gb|ACP53081.1| Cysteinyl-tRNA synthetase [Rickettsia africae ESF-5]
Length = 459
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 273/476 (57%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVY HIGN+R +V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNITD+DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKAVKYVRNITDVDDKIIDRAA------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L+ W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLNYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDL----LPIFNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ +K + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAIITCANFIGLMNKTPNEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +LV +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRPDGT-----TIWRKE 459
>gi|88803012|ref|ZP_01118539.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
gi|88781870|gb|EAR13048.1| cysteinyl-tRNA synthetase [Polaribacter irgensii 23-P]
Length = 492
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 155/492 (31%), Positives = 230/492 (46%), Gaps = 52/492 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++K+YN+L +K +F+ I + MYVCGPTVY AH+GN R + FD+++R L +
Sbjct: 6 ENQLKVYNSLSKKKEDFKPITAGYVGMYVCGPTVYSNAHLGNVRTFMFFDIVFRYLLHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +D+I ++AR E + + T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDADEGEDRIAKKARIEKIE------PMEVVQRYTVDFHNVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSR 167
L P+ +P AT HI + I +I++I+ G AYE N + FD R
Sbjct: 118 KNYNFLPPSIEPTATGHIVEQIEMIKDIVNKGFAYEVNGSVYFDVLAYNKKEHYGILSGR 177
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ D + + KKNP DF LWK++ W SPW G PGWH+ECS MS+ Y
Sbjct: 178 KVEDLVHNTRSLDGQSDKKNPQDFALWKKAEEKHIMRWPSPWSEGFPGWHLECSVMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQS N W+H L L G+KM+KS GNFI
Sbjct: 238 LGEQFDIHGGGMDLKFPHHECEIAQSKTCSGKTP-VNYWMHTNMLLLNGQKMAKSTGNFI 296
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK- 344
NE+L +++ A V+R L +YR +DF+ L +E SK +
Sbjct: 297 LPNEILTGENDILPKAFSASVVRFFNLQANYRSILDFSGAALEASEKGHSKLMEAVNVLE 356
Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
+ +A+ +D NT I L + + + + A
Sbjct: 357 NLATSSVSSFDVEKWKKSCYAAMNDDFNTPVLISYLFEAVKIINQIKEQKESITATDLGV 416
Query: 388 --------SAHILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LG+ H ++ + +E L++ R + K+++ +D IR +L
Sbjct: 417 LQETLNTFVFDVLGLTNEVLSHHSEKTNGVVELLIKLRKEARENKEWALSDQIRDELIEL 476
Query: 439 GFILEDYKNPDN 450
G L+D K+
Sbjct: 477 GIQLKDGKDGTT 488
>gi|302346055|ref|YP_003814408.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
gi|302150108|gb|ADK96370.1| cysteine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
Length = 495
Score = 351 bits (900), Expect = 2e-94, Method: Composition-based stats.
Identities = 165/501 (32%), Positives = 227/501 (45%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L+ I+ +G+AYE+N I FD S R
Sbjct: 113 RSLNVLPPSIEPHATGHIIEQEELVNQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I + +R K N DF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NITDMINNSRELAGVDEKHNQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DLIFPHHE EIAQ+ + E W+HN + + G+KM KS GNFI
Sbjct: 233 LGDHFDIHGGGMDLIFPHHECEIAQAVASQGDE-MVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ + +++ IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLA 351
Query: 346 IIDP-----------------AVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
I P A+ +DL T + I L +
Sbjct: 352 RIQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQISAD 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ +
Sbjct: 472 RDALAEAGFQVKDTKDGVTWK 492
>gi|320009404|gb|ADW04254.1| cysteinyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 466
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 244/484 (50%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++T R+I +F + + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII++A ++ N I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIKKAAEQ------NRPWWSIGYENERAFNDGYDVLGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +++ +I GHAYEA+ + FD S Y S + +D+ + + +
Sbjct: 113 PRATGHITEMIEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSG-DNE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 TGKRDKRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A W+HNG++ L G KMSKS N + +++++ + W
Sbjct: 232 PHHENEIAQAKAFG--DDFAKYWVHNGWVTLSGEKMSKSLDNSVLVSDMV-------KQW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGGPVEAAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAIIHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R + K + +AD IR QL G ++ED
Sbjct: 403 GESDRGEDLHGVVDTLVRLVLDQRQSARERKDWPAADAIRDQLNQSGLVIEDSPAGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|307710644|ref|ZP_07647077.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
gi|307618587|gb|EFN97730.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK564]
Length = 423
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 149/442 (33%), Positives = 218/442 (49%), Gaps = 36/442 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ H+GNAR + FD + R Y E V Y+ N TD+DDKII RA++E
Sbjct: 1 MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGYE--VAYISNFTDVDDKIINRAKEEG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + K F +D T L T PR + +I ++++I G AYE
Sbjct: 59 IT------PQEVADKYIAAFREDVTALGVKRATCHPRVVEFMTDIIRFVEDLIEKGFAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGW 204
+ ++ F NY + + +++ + G + + LWK + P E W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLEQGASGRTDEETARKENPVDFALWKAAKPGEISW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
SPWG GRPGWHIECS MS+ LG DIHGGG DL FPHH NEIAQS + AN
Sbjct: 173 NSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+HNGF+N++ KMSKS GNFIT+++ L ++ V+R HYR+PI+FT
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDAL-------KTLDGQVLRFFFATQHYRKPINFTE 284
Query: 325 QRLTEAEILLSKWPQTSTS----------KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ + +AE L T ++A+ D N+ + I + ++A+
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNSANGITVVFEMAKW 344
Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ + + GI +E + IE L+Q+R + F++AD I
Sbjct: 345 INSGNYDTSVKQALADMLEVFGIVFVEE----VLDAEIESLIQKRQEARANRDFATADQI 400
Query: 432 RKQLESKGFILEDYKNPDNGQR 453
R QL ++G L D K+ R
Sbjct: 401 RDQLAAQGIKLLDTKDGVRWTR 422
>gi|226363790|ref|YP_002781572.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
gi|254781690|sp|C1BAC4|SYC_RHOOB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226242279|dbj|BAH52627.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
Length = 464
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 156/477 (32%), Positives = 233/477 (48%), Gaps = 47/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T R + +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MTLRLFDTETRALRDFAPLAPGHASVYLCGATVQGDPHIGHVRSGVAFDVLRRWLLAHDY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDI+DKI+ +A + + + F +L L P+ +
Sbjct: 61 D--VAFVRNVTDIEDKILNKAAEAG------RPWWEWAATFERSFTWAYQQLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QM+ ++Q +I +GHAY A ++ FD S P YGS S K+D+ G
Sbjct: 113 PRATGHITQMVEMMQRLIDNGHAYAAGGDVYFDVRSYPRYGSLSGHKLDDVHQGESA--G 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GGLDL+F
Sbjct: 171 ECKRDPRDFTLWKAEKPGEPSWPTPWGRGRPGWHLECSAMAEFYLGAAFDIHCGGLDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ CA + A W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 231 PHHENEIAQAKCAG--DDFAQYWLHNGWVTMGGEKMSKSLGNVLSVPNVL-------KKV 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
+R + HYR ++++ L E + G A
Sbjct: 282 RPQELRYYLGSAHYRSMLEYSDTALDEGAAAYRRIESFVMRTQERAGEVTIGRWTDAFAR 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKN 404
AL +DL +A+ +H RE D + A ILG++ EH +
Sbjct: 342 ALDDDLAVPAALAEVHGKVREGNIALDGGDLEGARAIASQVRAMLGILGVDPLDEHWTQE 401
Query: 405 ----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + ++ R K ++ AD +R +L G + D N
Sbjct: 402 TADASAATDALDVLVRAELERRQTARAEKNWAVADEVRDRLIRAGIEVTDTPNGPEW 458
>gi|255534556|ref|YP_003094927.1| cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
gi|255340752|gb|ACU06865.1| Cysteinyl-tRNA synthetase [Flavobacteriaceae bacterium 3519-10]
Length = 488
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 162/493 (32%), Positives = 236/493 (47%), Gaps = 54/493 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYN+L F I +N+ MYVCGPTVY H+GN R + FD +YR L +
Sbjct: 1 MSLKIYNSLSGDKEIFTPIHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALTHLGY 60
Query: 63 EKCVTYVRNIT---------DID-DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNIT D+D D+ ++++R E I K T F K
Sbjct: 61 --KVRYVRNITDAGHLTDDGDVDNDRFVKQSRLEKLE------PMEIVQKYTVDFHKVLD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRR 168
L PT +P AT HI + I L Q ++ G AYE+N + FD NYG SRR
Sbjct: 113 VFNLLPPTIEPTATGHIVEQIELTQKLVDKGFAYESNGSVYFDVQEYNSRGLNYGELSRR 172
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I+E TR + ++ KNP DF LWK ++P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 173 NIEELFANTRDLDGQNEKKNPQDFALWKAASPAHIMRWNSPWGEGFPGWHLECTAMSTKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE E+AQ + E N W+H L + G++MSKS GN+I
Sbjct: 233 LGEKFDIHGGGMDLKFPHHECEVAQGKACNGTEP-VNYWLHANMLTMNGQRMSKSTGNYI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
EL+ F +++ V+R L HYR +D + + + +E +
Sbjct: 292 LPMELVSGSNSFFEKAFHPAVVRFNFLQAHYRSVLDISNEAMLASEKGFQRLMDAMKILS 351
Query: 346 II---------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF----- 385
+ AL +D N+ I L + + D
Sbjct: 352 DVQLKTASNSTFDVEAWKKKCYDALTDDFNSPILISHLFEAVNFIFRLKDGKETVTSTDL 411
Query: 386 --------NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ +LG++ +E+ ++ + A++ L++ R K K F +D IR +L +
Sbjct: 412 ENLKQLLNDFVFDVLGLQNVEENNHQKLDQALQVLIELRNQARKAKNFDLSDQIRDRLLA 471
Query: 438 KGFILEDYKNPDN 450
+G L+D ++
Sbjct: 472 EGIELKDGRDGTT 484
>gi|296138339|ref|YP_003645582.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296026473|gb|ADG77243.1| cysteinyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 465
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 155/478 (32%), Positives = 237/478 (49%), Gaps = 47/478 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y++L R++ +F + +Y+CG TV HIG+ R + FDVL R L
Sbjct: 1 MTLRLYDSLTREVRDFVPLVEGKAGIYLCGATVQGVPHIGHIRSGVAFDVLRRWLLATGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + + ++F + L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILRKAAEAG------RPWWEWAATHEREFTRAYDALGVLPPSAE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT I QM+ ++ +I GHAY + ++ F S+P+YG+ SR+K+D+ + G +
Sbjct: 113 PRATGFITQMVTYMERMIERGHAYASAGDVYFSVRSLPDYGALSRQKVDDVQQGETLAAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W SPWG GRPGWH+ECSAM++ YLG FDIH GG+DL+F
Sbjct: 173 --KRDPLDFTLWKAAKPGEPSWPSPWGDGRPGWHLECSAMATSYLGGQFDIHCGGMDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A + AN W+HNG++ + G KMSKS GN ++I LL +
Sbjct: 231 PHHENEIAQAHGAG--DPFANYWLHNGWVTMSGEKMSKSLGNVVSIPNLLTQVRAVE--- 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
+R + HYR +++ L EA + G +
Sbjct: 286 ----LRYYLGSAHYRSMQEYSAGALAEAATAYGRIESFVQRTVERTGEVPVGQWSAGFAA 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
AL +DL SA+ +H R + L A ILG++ H
Sbjct: 342 ALDDDLGVPSALAEVHAAVRAGNAALEAGDLDEARRLAGAVRAMTSILGVDPLDPHWVTE 401
Query: 402 NKNISIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
N A++ L ++ R K ++ AD R +L + G + D + +
Sbjct: 402 NAGDGAAMDALGVLVQAELERRAAARAEKNWAEADAARDRLHAAGIDVTDGADGSSWT 459
>gi|260592037|ref|ZP_05857495.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
gi|260536321|gb|EEX18938.1| cysteine--tRNA ligase [Prevotella veroralis F0319]
Length = 495
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 161/501 (32%), Positives = 230/501 (45%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDLLFRYLKHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQYYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD + S R
Sbjct: 113 RALNVLPPSIEPHATGHIIEQEELVKQIMDNGYAYESNGSIYFDVAKYDKDHHYGVLSGR 172
Query: 169 KIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ + +R +K+ DF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NLTDMINNSRELAGVGEKHNQVDFALWKRAMPEHIMRWPSPWSNGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DLIFPHHE EIAQ+ + ++ W+HN + + G+KM KS GNFI
Sbjct: 233 LGDHFDIHGGGMDLIFPHHECEIAQAVASQG-DQMVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T+ + +++ IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGKHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDSA 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
T A+ +DL T + I L +
Sbjct: 352 RIQPSDASDDNTKKFVANFRQKCYDAMNDDLMTPAVISNLFEACHLVNVLIDHKAQISAD 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMQLFAFDILGLKNERSANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ +
Sbjct: 472 RDALADAGFQVKDTKDGVTWK 492
>gi|302336403|ref|YP_003801610.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
gi|301320243|gb|ADK68730.1| cysteinyl-tRNA synthetase [Olsenella uli DSM 7084]
Length = 493
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 170/506 (33%), Positives = 239/506 (47%), Gaps = 73/506 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YN+ + E + ++ +IRMYVCGPTVYD HIGNAR + FDV+ R L Y +
Sbjct: 1 MLVYNSQTHRKEELRPLEEGHIRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLTYKGYQ- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ +N+TD+DDKII RA E S + + + F+ R L P +PR
Sbjct: 60 -VTFAQNLTDVDDKIINRANDEGRSAT------EVAEEFSCAFIDQMRRFNILDPDIRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + M +I+ +I GHAY A N ++ F S +YGS S R +D+ + G RV
Sbjct: 113 ATREVEAMRQMIETLIEKGHAYVAGNGDVYFSVRSDHDYGSLSGRDLDQLRAGERVEVNE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWH EC AM HYLG DIHGGG DL+FP
Sbjct: 173 DKRDPFDFALWKAAKPGEPSWPSPWGEGRPGWHTECCAMIHHYLGTPIDIHGGGQDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ CA ANIW+H G L + G KMSKS GNF+T+ ++L+ +P
Sbjct: 233 HHENECAQALCAWGA-PLANIWMHAGMLRVNGDKMSKSLGNFLTLEDVLDD-------YP 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
A +RL ML THYR +DF +L A L + +
Sbjct: 285 AGAVRLLMLQTHYRSALDFQTDQLEGAVGTLERLRTCVKNLRWAAENAPQDGELCDADRS 344
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFN 386
+ + +D NT + A+ L + +
Sbjct: 345 LGAAVDATHAEFVRQMDDDFNTSGGLAAIFSLVTSANTYLAERAGVVATAPVLRAADMLV 404
Query: 387 ASAHILGIEVCKEHLNKNISIAI-------------------EKLVQERLILLKMKKFSS 427
+ ++GI++ + + + I + L+ R K +
Sbjct: 405 ELSAVMGIDLVRGSGGEELPIELVDLARRHAGFEGHLADEAARALIDAREAARAAKDWGV 464
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQR 453
AD IR + G +LED +R
Sbjct: 465 ADAIRDGIAGLGLVLEDTPAGTRLRR 490
>gi|182437812|ref|YP_001825531.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|229558792|sp|B1VS94|SYC_STRGG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|178466328|dbj|BAG20848.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 466
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 248/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++T R+I +F + + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLHDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKSAEQG------RPWWSIGYENERAFNDGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI +++ +I GHAYEA+ + FD S+P Y + S +++D+ + + +
Sbjct: 113 PRATGHIPEMIEMMRGLIERGHAYEADGNVYFDVRSLPGYLTLSNQELDDLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 TGKRDQRDFAMWKATKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HNG++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQATAYG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KHW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEKTGEVVPPADEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDEDLGVPQALAIIHTTVRQGNSALAADDKEAAADRLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++ +R K +++AD IR QL G ++ED
Sbjct: 403 GEGDRGEDLHGVVDTLVRLVLDQRQSARARKDWAAADAIRDQLNQSGLVIEDSPAGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|333026131|ref|ZP_08454195.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
gi|332745983|gb|EGJ76424.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
Length = 466
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 239/484 (49%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 E--VVFVRNVTDIDDKIINKSAEQG------RPWWAIGYENERAFNAAYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +++ +I GHAYE+ + FD S P Y S +++ + + +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + + EAE + + PA
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ LH R+ L A +LG++
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402
Query: 403 ----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K + +AD IR QL G +ED
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|227834035|ref|YP_002835742.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
gi|227455051|gb|ACP33804.1| Cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 473
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 150/486 (30%), Positives = 228/486 (46%), Gaps = 53/486 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I++T R EF+ + P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MSTLRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ +A + N S ++F K L L P+
Sbjct: 61 YD--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVLPPSV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY----------EANNEIIFDTSSIPNYGSFSRRKID 171
+PRAT + QM+ +Q +I G AY + + + FD ++ +
Sbjct: 113 EPRATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLS 172
Query: 172 EQKMGTRVPEKYHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
++ + ++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG
Sbjct: 173 GNRVEEMEQGETDNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLG 232
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDIH GGLDL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I
Sbjct: 233 GEFDIHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSI 290
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STS 343
+LE + +R + HYR ++++ LTEA + +
Sbjct: 291 ANMLEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKFENVE 343
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
KG PA A+ +D+ A+ +H R K L A A +LG
Sbjct: 344 KGEWTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVLGF 403
Query: 395 EVCKEHLNK---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ E + + + ++ R K +++AD +R +L + G + D
Sbjct: 404 DPLDEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITITDT 463
Query: 446 KNPDNG 451
+
Sbjct: 464 ADGPTW 469
>gi|302552341|ref|ZP_07304683.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
40736]
gi|302469959|gb|EFL33052.1| cysteinyl-tRNA synthetase [Streptomyces viridochromogenes DSM
40736]
Length = 477
Score = 350 bits (899), Expect = 2e-94, Method: Composition-based stats.
Identities = 163/481 (33%), Positives = 242/481 (50%), Gaps = 48/481 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD+L R Y +
Sbjct: 16 IRLYDTSARQIRDFTPLQPGCVSIYLCGATVQAAPHIGHIRSGLNFDILRRWFAYRGYD- 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKII ++ + N I +N + F L CL PT++PR
Sbjct: 75 -VTFVRNVTDIDDKIIAKSADQ------NRPWWAIGYENERAFNDGYDALGCLPPTYEPR 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +MI +++ +I GHAY A+ + FD S P Y + S + ID+ +
Sbjct: 128 ATGHITEMIEMMRGLIERGHAYVADGSVYFDVRSFPEYLALSNQDIDDLRQPDEGV--SG 185
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDL+FPH
Sbjct: 186 KRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGTAFDIHGGGLDLVFPH 245
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ + A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 246 HENEIAQAKAYG--DDFAQYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRWRP 296
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSA 354
V+R + HYR I+++ + L EAE ++ + A A
Sbjct: 297 IVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVVEKAGVVEPAPEVPLAFAEA 356
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKN- 404
+ +DL A+ +H R+ L A +LG++ EH
Sbjct: 357 MDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDEHWAGES 416
Query: 405 ---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ + ++ +R K + +AD IR QL G ++ED
Sbjct: 417 DRGDDLHGVVDTLVRMVLDQREAARARKDWPTADAIRDQLSQSGLVIEDSPQGPRWSLGP 476
Query: 456 R 456
R
Sbjct: 477 R 477
>gi|309389952|gb|ADO77832.1| cysteinyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 483
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 174/493 (35%), Positives = 249/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL + EF+ ++ ++MYVCG TV +++HIG+ R +I +DV+ R L Y +
Sbjct: 1 MIKVYNTLTGEKEEFKPVEKDKVKMYVCGLTVQNYSHIGHIRSVINYDVIRRFLEYLGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TDI++KI++RA +E + + +K F++D
Sbjct: 61 --VDYISNFTDINEKIVQRAAEEDLK------PAALANKYANAFLEDLREFNVKPADKYL 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + ++ ++I ++ +I G+AYE N + F S +YG S R +DE + G R+
Sbjct: 113 RVSENVAEIIEMVTTLIEKGYAYEVNGNVYFSVESFADYGKLSGRNLDEMQAGARIAVNK 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK+ E GW+SPWG G PGWHIECSAMS LG FDIHGGG+DLIFP
Sbjct: 173 EKRNPLDFGLWKKV-ESETGWDSPWGEGWPGWHIECSAMSMKRLGSTFDIHGGGVDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS +K N W+HNG +NL G KMSKS GNF T E+L + +
Sbjct: 232 HHENEIAQSEAYSD-QKFVNYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFS 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A V+R +L HYR PIDF+ ++L EA L++ T +
Sbjct: 284 AEVVRYFLLTRHYRSPIDFSYEKLEEAATSLTRIKNTRKQLAKVLSLDINSAAENKIEQE 343
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
++AL +D NT AI +H LA E +
Sbjct: 344 FFENIISKKKEFIAALKDDFNTAEAIGVIHDLAGEINSYINRKEFDLNEKNFALLTKTEK 403
Query: 384 IFNASAHILGIEVC----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
IF ILG+E E ++ +S + L++ R + K + AD IR QLE G
Sbjct: 404 IFLELIEILGLEFKLESASESESELVSPLVNLLIKLRNKARENKNWQEADLIRDQLEEIG 463
Query: 440 FILEDYKNPDNGQ 452
+ D + +
Sbjct: 464 IEVIDSPHGTEWE 476
>gi|163786101|ref|ZP_02180549.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
gi|159877961|gb|EDP72017.1| cysteinyl-tRNA synthetase [Flavobacteriales bacterium ALC-1]
Length = 493
Score = 350 bits (898), Expect = 2e-94, Method: Composition-based stats.
Identities = 161/493 (32%), Positives = 222/493 (45%), Gaps = 53/493 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IKIYNTL + F I ++ MYVCGPTVY H+GN R + FD+++R +
Sbjct: 6 SQHIKIYNTLSGEKELFVPITEGHVGMYVCGPTVYSNVHLGNVRTFMSFDMIFRYFNHLG 65
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI ++AR E I + T F
Sbjct: 66 Y--KVRYVRNITDAGHLENDDDVGEDKITKKARLEAIE------PMEIVQRYTVDFHNVL 117
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN---YGSFSRR 168
L P+ +P AT HI + I LI++II G AY N + FD YG S+R
Sbjct: 118 NTFNFLPPSIEPTATGHIIEQIELIESIIDKGFAYVVNGSVYFDVHKYNESNAYGILSKR 177
Query: 169 KIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
K+++ + + KKNP DF LWK++ P W SPW G PGWH+EC+AMS+ Y
Sbjct: 178 KLEDLIHNTRTLDGQSDKKNPQDFALWKKAEPAHIMRWPSPWSDGFPGWHLECTAMSTKY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ+ A + W+H L L G +MSKS+GN+I
Sbjct: 238 LGEYFDIHGGGMDLKFPHHECEIAQNQAAKGQDP-VKYWMHANMLELNGARMSKSSGNYI 296
Query: 287 TINELLETKKFG-GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
ELL + + VIR M+ Y+ +D T L AE ++
Sbjct: 297 NPAELLSGNNDKMSKGYNPMVIRFFMMQASYKSVLDLTDAGLKAAEKGFNRLMDAINLID 356
Query: 346 I-------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------ 380
A+ +D NT I L A+ + D
Sbjct: 357 NLKTSDSSSFDISVWKQKCYDAMNDDFNTPILIAHLFDAAKFINQIKDGSATVTSEDLDF 416
Query: 381 LLPIFNAS-AHILGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
L ILG+ + ++ A+E L+ R K F+ +D IR +L
Sbjct: 417 LKQTIETFTFDILGLTNVSKDDSNTDKLTGAVEILINLRKEARLNKDFALSDKIRDELAE 476
Query: 438 KGFILEDYKNPDN 450
G L D ++
Sbjct: 477 AGIQLNDSRDGTT 489
>gi|282860520|ref|ZP_06269586.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
gi|282564256|gb|EFB69792.1| cysteinyl-tRNA synthetase [Streptomyces sp. ACTE]
Length = 465
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 158/483 (32%), Positives = 246/483 (50%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTNARQIRDFVPLTAGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII+++ ++ N I +N + F L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIIKKSAEQ------NRPWWSIGYENERAFNDGYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +M+ +++ +I GHAYEA+ + FD S Y S + +D+ + + +
Sbjct: 113 PRATGHITEMVEMMRGLIERGHAYEADGNVYFDVRSYEGYLELSNQDLDDLRQPSG-EGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DLIF
Sbjct: 172 TGKRDPRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGIDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HNG++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQAKAFG--DEFAKYWVHNGWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFVQRVTEMAGGEVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPQALAVVHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDAHWV 402
Query: 403 KN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + ++ +R K + +AD IR +L G ++ED
Sbjct: 403 SETEGEDLHGVVDTLVRLVLDQRQAARDRKDWPAADAIRDRLSQAGLVIEDSSGGPRWTL 462
Query: 454 MTR 456
R
Sbjct: 463 GPR 465
>gi|319948867|ref|ZP_08022980.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
gi|319437469|gb|EFV92476.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
Length = 478
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 141/488 (28%), Positives = 221/488 (45%), Gaps = 56/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + EF + + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MTLHLYDTATRSLREFTPVREGHASVYLCGATPQAVPHIGHVRSGVAFDILRRWLLSTGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + + ++F + L L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKAAENG------RPWWEWAATHEREFTRAYDALGVLPPSTE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QMI ++ +I G+AY A + FD ++ + ++ +
Sbjct: 113 PRATGHMTQMIEYMERLIERGYAYPAEGSVYFDVAAWSAAPEGDYGHLSGHRLDEVDQGE 172
Query: 183 ----YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FDIHGGGL
Sbjct: 173 AADLRGKRDPRDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMATWYLGGTFDIHGGGL 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 233 DLQFPHHENEAAQSHAAGDG--FARYWLHNGWVTMAGEKMSKSLGNVLSVPNILTAVR-- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTST 342
+R + HYR ++++ + L EA + P
Sbjct: 289 -----PVELRYYLGSAHYRSMLEYSPEALQEAAAAYRRIEAFVQRVDEAVRSGATPDAEV 343
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
G A +A+ +DL +A+ +H R A +LG
Sbjct: 344 PVGEWTEAFAAAMDDDLGVPAALAEIHGRVRAGNTALSAGDTEAALTAASSVRAMTAVLG 403
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + + + ++ R K F++AD IR +L + G +
Sbjct: 404 VDPLDPQWASAAGGDDAALTALDLLVRAELEARAQARADKDFATADAIRDRLVAAGIEVA 463
Query: 444 DYKNPDNG 451
D +
Sbjct: 464 DTADGQKW 471
>gi|238650546|ref|YP_002916398.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
gi|259511842|sp|C4K199|SYC_RICPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|238624644|gb|ACR47350.1| cysteinyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
Length = 459
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 194/476 (40%), Positives = 272/476 (57%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVY HIGN+R +V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNITD+DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKAVKYVRNITDVDDKIIDRAA------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDL----LPIFNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ +K + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAIITCANFIGLMNKTPHEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I +LV +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYINELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459
>gi|296111414|ref|YP_003621796.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
gi|295832946|gb|ADG40827.1| cysteine--tRNA ligase [Leuconostoc kimchii IMSNU 11154]
Length = 483
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 156/485 (32%), Positives = 236/485 (48%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I P I MYVCGPT+Y++ HIGNAR I FDV+ R Y +
Sbjct: 15 MIHVYNTLTREKEIFKPITPGKINMYVCGPTIYNYIHIGNARSAIAFDVVRRYFEYRGYD 74
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+RAR++ I ++ F +DT L T +
Sbjct: 75 --VNYVSNFTDVDDKIIKRAREQGVDE------MTIANRYADAFHQDTLPLNIKPATVRS 126
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+ IP +I + ++I G+AYE+ ++ F YG + + + E +
Sbjct: 127 RATDVIPDIILFVGDLIKKGYAYESEGDVYFRAKRFKGYGILAHQDLAEMEANAAGRLDD 186
Query: 184 ----HKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF +WK + E W+SPWG+GRPGWHIECS M+ YL DIHGGG+
Sbjct: 187 IELTRKEDPIDFAVWKASHSKDEISWQSPWGKGRPGWHIECSVMAQKYLADTIDIHGGGI 246
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS + N W+HNGF+N+ KMSKS GNF T++++L
Sbjct: 247 DLAFPHHTNEIAQSEARTG-KTFVNYWMHNGFVNVNDEKMSKSLGNFTTVHDMLANYD-- 303
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
IR + T YR I+++ L +A + L + +
Sbjct: 304 ----DPMAIRYLLSTTQYRRSINYSDDTLEQARVALDRIRTAYRNLSFRMETAVNGRDQA 359
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
+A+ +D NT +A+ ++ +L + + LL
Sbjct: 360 VDRVIEERISDFEAAMDDDFNTPNALASIFELVTIANTLAESQQIYLETTQHLLHTIAKL 419
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ GIE + N++ ++L++ R + + + F ++D +R+ L G ++ED
Sbjct: 420 MSVFGIENL--SVASNLTKEQDELLKLRHLARETRDFEASDRLRQNLHQLGIVVEDTPQG 477
Query: 449 DNGQR 453
R
Sbjct: 478 QRWHR 482
>gi|6599476|gb|AAF18750.1|AF163997_1 cysteinyl-tRNA synthetase [Methanococcus maripaludis]
Length = 476
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 167/494 (33%), Positives = 243/494 (49%), Gaps = 59/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL RK EF+ ++ + ++MYVCGP VYD H+G+ R + D++ R L +
Sbjct: 1 MLKVYNTLTRKEEEFKTLNKNEVKMYVCGPPVYDTTHLGHGRTYVSLDIIRRYLEHIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII+RA ++ I+ + + F+ D L P
Sbjct: 60 -TVNLVINFTDIDDKIIKRAYEKGKD------PKEISEQFIKVFLDDMATLKVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HI ++I I+ +I G AY+ + + F+ NYG S +++ G RV
Sbjct: 113 KVTEHISEIIAFIERLIEKGFAYKTEDGVYFEVKKFKNYGKLSNINLEDLVSGARVETSE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKN DF LWK + P EP WESP+G+GRPGWHIECSAMSS YLG+ FDIHGGG DL FP
Sbjct: 173 KKKNQKDFALWKTAKPGEPKWESPFGKGRPGWHIECSAMSSKYLGEQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N WIH GF+ + G KMSKS GNFITI ++ + +
Sbjct: 233 HHENEIAQSSAYSG-KDWVNYWIHTGFVMVNGEKMSKSLGNFITIGDI-------SKEYS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------------- 340
++R + HYR PID+T + + + L K
Sbjct: 285 PEILRFFFIQRHYRSPIDYTAESMNHVKNNLEKIYNVIENIRISLEKSEKSRIWGENEFL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNA 387
+A+ +D NTV A++++ +++ K L L +
Sbjct: 345 LYDILKNSKNNFYNAMNSDFNTVEALKSVFEVSNGVNKYLSLTETPSEGLLLKALDFYKI 404
Query: 388 SAHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ KE N ++ L++ R L K + +D IR L++ G+ +ED
Sbjct: 405 IGEIFGLFENYFKESSESNEEEFVKFLIELRSDLRLQKNYEMSDKIRDGLKNLGYQIEDN 464
Query: 446 KNPDNGQRMTRWKQ 459
+ T +K+
Sbjct: 465 P-----KEGTVFKK 473
>gi|218184692|gb|EEC67119.1| hypothetical protein OsI_33924 [Oryza sativa Indica Group]
Length = 523
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 181/508 (35%), Positives = 263/508 (51%), Gaps = 76/508 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + F+ + MYVCG T YD++H+G+AR + FDVL+R L+Y E
Sbjct: 21 ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN TDIDDKII+RA + + ++S+ +F +D L CL PTH+P
Sbjct: 81 --VNYVRNFTDIDDKIIKRANEAG------EDALSLSSRFIDEFHRDMYELQCLPPTHEP 132
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T HI Q+I LI I+ +G AY ++ F + P+Y S S RK+D+ + GTRV
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS A E W+HNGF+N +G+KM+K++ NF TI +++ +
Sbjct: 253 HHENELAQSQAAY-PESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
+RL ++ THYR ++ + L A L QT
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLP 383
L + +DL+T +A+ L KL ++ K D +
Sbjct: 365 DQKLIEENHSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQ 424
Query: 384 IFNAS-------AHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMK 423
A ILG+ E K+ +K + + +++++++R + K K
Sbjct: 425 ALVALQNEVTDKLSILGLMPMSSLAEALKQLKDKALKRAGMTAEQLQQMIEQRTLARKNK 484
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNG 451
F+ +D IR +L + G L D
Sbjct: 485 DFAESDRIRTELSALGIALMDEPTGTLW 512
>gi|157827987|ref|YP_001494229.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165932680|ref|YP_001649469.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
gi|187631627|sp|B0BW37|SYC_RICRO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187631628|sp|A8GQP6|SYC_RICRS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157800468|gb|ABV75721.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165907767|gb|ABY72063.1| cysteinyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
Length = 459
Score = 350 bits (898), Expect = 3e-94, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 271/476 (56%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + ++YNTL R F D N++MYVCGPTVY HIGN+R +V+D+LYR++
Sbjct: 1 MQIQFRLYNTLSRTKEVFNPQDQDNVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNITD+DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKAVKYVRNITDVDDKIIDRAA------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDL----LPIFNASAHILGI---EVCKEHLNKN 404
+L +D+NT A++ ++ A+ +K + A+ +G+ + +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAIITCANFIGLMNKSPHEWFNSGV 408
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I +LV +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYINELVNKRLEAKKHKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459
>gi|167563301|ref|ZP_02356217.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis EO147]
gi|167570473|ref|ZP_02363347.1| cysteinyl-tRNA synthetase [Burkholderia oklahomensis C6786]
Length = 465
Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 177/486 (36%), Positives = 247/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ HIG+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHIGHARMVVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +TS+ T D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIRSLTSRFTDAMNADFDALGVERPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + YG S + +++ + G RV
Sbjct: 112 IEPRATEFIPQMLGMIEKLEANGYAYQAKDGDVNYSVRKFAGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P EP W+S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPEEPVGASWDSKYGLGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWMHNGFVQVDSEKMSKSLGNFFTIREVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
++ A V+R ++ THYR P++++ L +A L++
Sbjct: 288 ----NFDAEVVRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDATPDSAPLDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------------HILG 393
+A+ +D NT A+ L +LA E + D L
Sbjct: 344 HARRFAAAMNDDFNTPVAVAVLFELATEVNRTRDPALARQLGRLAGLLGLLGREPREFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R+ + K ++ AD IR +L G LED
Sbjct: 404 QAAGTPRAGALEPEEIEAKIAARVAAKRAKNYAEADRIRAELLEAGIALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|241895151|ref|ZP_04782447.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
gi|241871647|gb|EER75398.1| cysteinyl-tRNA synthetase [Weissella paramesenteroides ATCC 33313]
Length = 471
Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 168/494 (34%), Positives = 240/494 (48%), Gaps = 60/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NT+ F I I MYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MIKMFNTMTLAKEPFHPIHDDTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+ A ++ ++P + K F +DT L T +P
Sbjct: 60 -TVNYVSNFTDVDDKMIKAAAEQGITVP------ELADKYIAAFNEDTAALNIKPATVRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
RAT HI Q+I + ++I G+AYE+ ++ + NYG+ + + + E
Sbjct: 113 RATEHIAQIIDFVADLIDKGYAYESAGDVYYRAKKFHNYGALAHQDLAEMTSNAAGRLND 172
Query: 183 ---YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF +WK WESPWG+GRPGWHIECS MS+ YLG FDIHGGG+
Sbjct: 173 EELERKEDPMDFAVWKGENGDGAIAWESPWGKGRPGWHIECSVMSTKYLGNHFDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHH NEIAQS EK N W+HNGF+ + E KMSKS GNF+T+++LL+
Sbjct: 233 DLAFPHHTNEIAQSEVHTG-EKFVNEWLHNGFVTVGDENEKMSKSLGNFVTVHDLLQQID 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------- 343
V+R M T YR I ++ +T+A L + +
Sbjct: 292 ------DPMVLRFFMATTQYRRSIAYSESNMTQAAHNLDRIRTGYRNLAFRLTDAVAGDE 345
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFN 386
+ +A+ +D N +A+ A+++L + + +L
Sbjct: 346 SLIDDKASELVVQFNTAMDDDFNAPNALTAIYELVDLANQYAATEVVYQDTVNFILDKIT 405
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
I G++ + + IE L+QER K F+ +D IR L +G ILED
Sbjct: 406 VLMSIFGVDGLSDDELLD--DDIEALIQERNDARTNKNFARSDEIRDSLAEQGIILEDT- 462
Query: 447 NPDNGQRMTRWKQK 460
+ TRW +K
Sbjct: 463 -----PQGTRWHRK 471
>gi|228950638|ref|ZP_04112772.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228808989|gb|EEM55474.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 440
Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 167/464 (35%), Positives = 239/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I IQ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ F T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTS------------------TSKGIIDPA---VLSALYNDLNTVSAIQ 366
L + I+ A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ +A + + + ILG+E+ KE L + IE+L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSKEEL---LDKEIEELIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439
>gi|254387148|ref|ZP_05002419.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
gi|194345964|gb|EDX26930.1| cysteinyl-tRNA synthetase 1 [Streptomyces sp. Mg1]
Length = 466
Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 249/484 (51%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFTPLVPGCVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII ++ ++ I +N + F T L CL PT++
Sbjct: 61 D--VTFIRNVTDIDDKIITKSAEQG------RPWWSIGYENERAFNDGYTALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ +M+ +++ +I GHAYEA+ + FD S P Y + S +++ + M +
Sbjct: 113 PRATGHVTEMVEMMRGLIERGHAYEADGNVYFDVRSFPGYLALSNQEL-DNLMQPSGTGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKSAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ ++ A W+HN ++ + G KMSKS GN + ++E++ ++W
Sbjct: 232 PHHENEIAQAKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KAW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + A
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEEALREAESAFARIEGFCQRVVEKAGGPVEPAAEVPLAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEVMDDDLGVPQALAIVHTTVRQGNSALAADDKDAAIARLSEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K +++AD IR QL+ G ++ED +
Sbjct: 403 GEADRGEDLHGAVDTLVRLVLEQRESARGRKDWATADAIRDQLQQSGLVIEDSPSGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|157803268|ref|YP_001491817.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
gi|187630858|sp|A8EXE9|SYC_RICCK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157784531|gb|ABV73032.1| cysteinyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
Length = 459
Score = 350 bits (897), Expect = 3e-94, Method: Composition-based stats.
Identities = 197/476 (41%), Positives = 274/476 (57%), Gaps = 35/476 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F+ D +N++MYVCGPTVYD HIGN+R V+D+LYR+L
Sbjct: 1 MQIQFHLYNTLTRTKELFRPQDQANVKMYVCGPTVYDNPHIGNSRSAAVYDLLYRILIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+G V Y+RNITD+DDKII+RA + I+ +T K TQ+F + L C P+
Sbjct: 61 FGSTAVKYIRNITDVDDKIIDRAE------LLGSTINELTDKVTQEFHINMEYLGCKLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+ + F+ S PNY S R ++E G RV
Sbjct: 115 IEPKATEHIDIMIEIIERLIAKKHAYIADKHVYFNVLSAPNYTELSNRNLEEMFEGVRVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KK+P DF+LWK + P E ++SPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKHPQDFVLWKPAKPNESANMNFDSPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+H+GFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHHGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVL 352
+ VIRL +L +HYR P+D+ + + +A+ L W + II +
Sbjct: 291 --KEISGEVIRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIVNINLQKIDIIPNDFM 348
Query: 353 SALYNDLNTVSAIQALHKLARES-TKNHDLLPIFNAS-----AHILGI--EVCKEHLNKN 404
+L +D+NT A++ ++ AR T + FNAS A+ +G+ + E N
Sbjct: 349 QSLLDDMNTPLAVKIINDYARGVFTSTTEEEKKFNASNLITCANFIGLMNKTPHEWFNSG 408
Query: 405 ISIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ I +LV +RL K K + AD IR QL + +LED + T W++
Sbjct: 409 VNELYINELVNKRLEAKKQKNWLLADQIRNQLLEQQIVLEDKPD------GTIWRK 458
>gi|229819277|ref|YP_002880803.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
gi|259511825|sp|C5BYT3|SYC_BEUC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229565190|gb|ACQ79041.1| cysteinyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
Length = 474
Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats.
Identities = 159/493 (32%), Positives = 245/493 (49%), Gaps = 59/493 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y++ R + +F+ ++P + +Y+CG TV H+G+ R +I FDVL R LR
Sbjct: 1 MTLRLYDSATRAVRDFEPLEPGKVGIYLCGATVQGEPHVGHLRSVIAFDVLVRWLRRSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT +RN+TDIDDKI+ ++ + ++ + F + L PT++
Sbjct: 61 D--VTMIRNVTDIDDKILAKSAEAGV------PWWAWAYRHERAFSDAYDAVGNLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ +MI L+Q ++ G+AY + + FD S+ +YGS +R+K++ T E
Sbjct: 113 PRATGHVVEMIELMQRLVDRGNAYRGKDGNVWFDVRSLADYGSLTRQKLENM--STLEEE 170
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF LWK P +P WE+P+GRGRPGWH+ECSAM+ YLG+ FDIHGGG+
Sbjct: 171 SSDKADPHDFALWKGLKPGDPETASWETPFGRGRPGWHLECSAMAYRYLGETFDIHGGGI 230
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+HN ++ G KMSKS GN++T E L
Sbjct: 231 DLRFPHHENEQAQSHAAGYG--FARYWLHNAWVTAGGEKMSKSLGNYLTAAEALGRV--- 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
PA V+R A+ HYR ++FT L EA + + T
Sbjct: 286 ----PAVVLRYALASVHYRSSVEFTEATLAEARVTWERIAGFVTRAAELTGPVGDDGAAR 341
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
+ A + A+ +DLN +A+ LH+ R L +L
Sbjct: 342 LADVVLPIAFVEAMDDDLNVSAALAVLHEHIRLGNTALSSGEAGDAAAELSAVRGMLDVL 401
Query: 393 GIEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G++ E + + +E ++ +R K ++ AD +R QL + G ++E
Sbjct: 402 GLDPLAEPWVGEASATPLRGAVDVLVEGVLADRSAARAAKDWARADALRDQLAAAGVVVE 461
Query: 444 DYKNPDNGQ-RMT 455
D + + T
Sbjct: 462 DSPSGARWTIKGT 474
>gi|302520121|ref|ZP_07272463.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
gi|302429016|gb|EFL00832.1| cysteinyl-tRNA synthetase [Streptomyces sp. SPB78]
Length = 466
Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 239/484 (49%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 E--VVFVRNVTDIDDKIINKSAEQG------RPWWAIGYENERAFNAAYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +++ +I GHAYE+ + FD S P Y S +++ + + +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPGYLELSHQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + + EAE + + PA
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRVEGFVQRVTELNGGEVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ LH R+ L A +LG++
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402
Query: 403 ----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K + +AD IR QL G +ED
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|256833282|ref|YP_003162009.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
gi|256686813|gb|ACV09706.1| cysteinyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
Length = 469
Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats.
Identities = 157/483 (32%), Positives = 238/483 (49%), Gaps = 51/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NT R + F+ + + +YVCG TV HIG+ R + FDVL R L+
Sbjct: 1 MTLRLFNTATRTVDPFEPREAGKVGVYVCGATVQAAPHIGHMRSAVAFDVLVRWLQRAGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY+RN+TDIDDKI+ ++ A S N Q F + L L PT++
Sbjct: 61 D--VTYIRNVTDIDDKILAKSADAKM------AWWAWASLNEQAFTEAYDALGNLRPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ MI L+ +I GHAY + + FDT S P YG+ + + IDE+ + T
Sbjct: 113 PRATGHMLDMIDLMGTLIERGHAYVSSPGNVYFDTQSWPQYGALTNQHIDERVLSTADVS 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+K++P DF LWK EP W +P+G GRPGWH+ECSAM+ YLG FDIHGGGL
Sbjct: 173 DPNKRDPRDFALWKAPKEGEPSTASWPTPYGTGRPGWHLECSAMARRYLGSEFDIHGGGL 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A +W+H+ ++ G KMSKS GN + + E+L
Sbjct: 233 DLRFPHHENEQAQSHAAGDG--FARVWMHSAWVTQGGAKMSKSLGNGLLVTEVL------ 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
+ PAPV+R A+ HYR +++T Q L +A + ++
Sbjct: 285 -KQAPAPVLRFALASVHYRSMVEWTQQSLIDAGVAWDRFTGVYRRAVETVGDKVTVPVTT 343
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIE 395
+ A AL +DLN + L+ + + + A +LG++
Sbjct: 344 VELPQAFTDALNDDLNVAQGLAVLYDSVKTANTALANNNLPEATHAVLQVRAMLDVLGLD 403
Query: 396 VCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + ++ ++ + R K ++++D IR L + G ++ED +
Sbjct: 404 PAQWAAPDTDSRADSALASLVQGQLDRRAQARADKDWATSDAIRDALAAAGIVVEDSPHG 463
Query: 449 DNG 451
Sbjct: 464 ARW 466
>gi|318058498|ref|ZP_07977221.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318079336|ref|ZP_07986668.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
Length = 466
Score = 350 bits (897), Expect = 4e-94, Method: Composition-based stats.
Identities = 157/484 (32%), Positives = 238/484 (49%), Gaps = 48/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGAPHIGHIRSGLDFDIMRRWFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN+TDIDDKII ++ ++ I +N + F L CL PT++
Sbjct: 61 E--VVFVRNVTDIDDKIINKSAEQG------RPWWAIGYENERAFNAAYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +++ +I GHAYE+ + FD S Y S +++ + + +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFLEYLELSHQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FD+HGGGLDLIF
Sbjct: 172 TGKRDSRDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGAAFDVHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS ++ A W+HN ++ + G KMSKS GN + ++E++ + W
Sbjct: 232 PHHENEIAQSKAYG--DEFAKYWVHNAWVTMSGEKMSKSLGNSVLVSEMV-------KRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + + EAE + + PA
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ LH R+ L A +LG++
Sbjct: 343 AEAMDDDLGVPQAVAVLHTTVRQGNSALAADDKEAAVARLAEVRAMLGVLGLDPLDPQWA 402
Query: 403 ----------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + ++++R K + +AD IR QL G +ED
Sbjct: 403 TGGEQAEDLHGVVDTLVRLVLKQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRWT 462
Query: 453 RMTR 456
R
Sbjct: 463 LGPR 466
>gi|152964879|ref|YP_001360663.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
gi|189082067|sp|A6W6G0|SYC_KINRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151359396|gb|ABS02399.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
Length = 471
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 162/484 (33%), Positives = 241/484 (49%), Gaps = 52/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++++ + EF + P + +YVCG T H+G+ R +VFDVL R L
Sbjct: 1 MTLHLHDSAAGAVREFAPLVPGQVGIYVCGATPQGSPHLGHVRAQVVFDVLRRWLVRSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT VRN+TDIDDKI+ +A + + ++F L L PT +
Sbjct: 61 E--VTLVRNVTDIDDKILAKAAEAGTE------WWAHAYRFEREFSAAYAALGVLPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P+M+ LIQ ++ GHAY + + ++ FD S P YG + +++D+ +
Sbjct: 113 PRATGHVPEMVELIQRLVERGHAYAAADGSGDVYFDVRSWPAYGELTHQRLDDMEPAADA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK + P EP W +PWGRGRPGWH+ECSAM+ YLG FD+HGG
Sbjct: 173 DPR-GKRDPRDFALWKGAKPGEPATASWATPWGRGRPGWHLECSAMAGRYLGPRFDVHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE AQS A AN W+HN F+ + G KMSKS GN + + LLET +
Sbjct: 232 GLDLRFPHHENEQAQSRAAGDG--FANFWLHNHFVTMSGEKMSKSLGNVLGVPHLLETHR 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTSTSKGII 347
A V+R ++ HYR ++ + L EAE S+ + G +
Sbjct: 290 -------AVVLRYYLVSGHYRTHLEHSENSLVEAEAAYSRLEGLLRRAAERLGGLAAGEV 342
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
A +A+ +DL T +A+ LH+ AR A +LG++
Sbjct: 343 PAAFAAAMDDDLATPTALAVLHETARAGNSALAAGDEAALRTAAGQLRAGLDVLGLDPFA 402
Query: 399 EHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
E + + + +++R K F++AD +R L+S G ++ED
Sbjct: 403 EPWASQTTGSDAARTALDVLVRARLEDRATARATKDFATADAVRDSLKSAGIVIEDTPTG 462
Query: 449 DNGQ 452
Sbjct: 463 ARWA 466
>gi|315224033|ref|ZP_07865874.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
gi|314946004|gb|EFS98012.1| cysteine--tRNA ligase [Capnocytophaga ochracea F0287]
Length = 492
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 161/491 (32%), Positives = 235/491 (47%), Gaps = 44/491 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++++KI+N+L + F + +N+ MYVCGPTVY H+GN R + FD +YR L++
Sbjct: 1 MEQRLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 61 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K+NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ E W+H L + G++MSKS GN+I +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHG-ESPVRYWMHANMLTMNGQRMSKSTGNYILPMQ 297
Query: 291 LLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
L+ F + + VIR + HYR +D + + + AE ++ +
Sbjct: 298 LISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAMKILNELTT 357
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLARES------------TKNHDLL 382
AL +D N+ I L + + T+ ++L
Sbjct: 358 DAELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNGEEKISVTELNELK 417
Query: 383 PIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+ NA +LG++ ++ N N + ++ L+ R+ K + +D IR +L + G
Sbjct: 418 ELMNAFVFDVLGLQNEQQTANNNDKLDGVLQLLINMRMEARANKDWVLSDKIRDELLALG 477
Query: 440 FILEDYKNPDN 450
L+D K +
Sbjct: 478 IQLKDGKEGTS 488
>gi|262183479|ref|ZP_06042900.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
Length = 470
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 150/483 (31%), Positives = 228/483 (47%), Gaps = 53/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++T R EF+ + P + +Y+CG T HIG+ R + FD+L R L +
Sbjct: 1 MRIFDTATRSQREFEPVRPGHASIYLCGATPQSQPHIGHLRSGVAFDILRRWLSAQGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN+TDIDDKI+ +A + N S ++F K L L P+ +PR
Sbjct: 60 -VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNTLGVLPPSVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY----------EANNEIIFDTSSIPNYGSFSRRKIDEQK 174
AT + QM+ +Q +I G AY + + + FD ++ + +
Sbjct: 113 ATGFVTQMVEYMQRLIDAGFAYAVPNGTAGGEDDSGSVYFDVAAWNATEGSDYGSLSGNR 172
Query: 175 MGTRVPEKYHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ + ++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG F
Sbjct: 173 VEEMEQGETDNAGKRSPQDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGGEF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GGLDL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I +
Sbjct: 233 DIHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSIANM 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGI 346
LE + +R + HYR ++++ LTEA + + KG
Sbjct: 291 LEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVGKFENVEKGE 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVC 397
PA A+ +D+ A+ +H R K L A A +LG +
Sbjct: 344 WTPAFEEAMNDDIAVPKALAEIHTTVRAGNKALSEGNREEAKRLAGAVRAMAAVLGFDPL 403
Query: 398 KEHLNK---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
E + + + ++ R K +++AD +R +L + G + D +
Sbjct: 404 DEQWKDSGEESGAEAALDVLVRAELERRTTARAEKDWATADAVRDRLAAAGITITDTADG 463
Query: 449 DNG 451
Sbjct: 464 PTW 466
>gi|282858921|ref|ZP_06268061.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
gi|282588303|gb|EFB93468.1| cysteine--tRNA ligase [Prevotella bivia JCVIHMP010]
Length = 495
Score = 349 bits (896), Expect = 4e-94, Method: Composition-based stats.
Identities = 160/501 (31%), Positives = 230/501 (45%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDSDEGDDKIEKKARLEQLE------PMEIAQYYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L+ I+ +G+AYE+N I FD + S R
Sbjct: 113 RALNVLPPSIEPHATGHIIEQEQLVDEIMKNGYAYESNGSIYFDVAKFNEDYKYGVLSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ +R K+N DF LWKR+ P W S W G PGWH EC+AM Y
Sbjct: 173 NLNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSKWSEGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL+FPHHE EIAQ+ + E W+HN + + G+KM KS GNFI
Sbjct: 233 LGNHFDIHGGGIDLVFPHHECEIAQAVASQGDE-MVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T++E + +++ IR +L HYR +DF+ + L ++ K
Sbjct: 292 TLSEFFTGSHEKLEQAYSPMTIRFFILSAHYRGTVDFSNEALQASQKGYEKLMNGIEDLS 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA- 387
T A+ +DL T + I +L + D +A
Sbjct: 352 RVQTSGESDTNTKQFVSTFRQKCYDAMNDDLMTPAVISSLFEACHVVNLLVDHKAQISAD 411
Query: 388 ------------SAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
+ ILG+ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELSEVMNIFAFDILGLRNERSANNDAREEAFGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ +
Sbjct: 472 RDALAEAGFNVKDTKDGVTWK 492
>gi|262200969|ref|YP_003272177.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
gi|262084316|gb|ACY20284.1| cysteinyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
Length = 463
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 154/477 (32%), Positives = 234/477 (49%), Gaps = 46/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R++ +F + P +Y+CG TV HIG+ R I FD+L R L + G
Sbjct: 1 MTLRLYDTATREVRDFVPLHPGRASVYLCGATVQGVPHIGHVRSGIAFDILRRWLAH--G 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN+TDI+DKI+ +A + + + ++F L L P+ +
Sbjct: 59 GLDVLFVRNVTDIEDKILRKAAEAG------RPWWEWAATHEREFTDAYDALGVLPPSGE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT I QM+ + +I GHAY A+ + FD S+P+YG+ S K+D+ G
Sbjct: 113 PRATGFITQMVEYMDRLIERGHAYAADGNVYFDVRSLPDYGALSGHKLDDVHQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ LG FDIH GG+DLIF
Sbjct: 173 --KRDPRDFTLWKAAKPDEPSWPTPWGPGRPGWHLECSAMATALLGPEFDIHCGGMDLIF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A + A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 231 PHHENEIAQAHGAG--DPFARYWLHNGWVTMGGEKMSKSLGNVVAIPAMLQRVRAVE--- 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLS 353
+R + HYR ++++ LTEA + G IDP
Sbjct: 286 ----LRYYLGSAHYRSMLEYSDGALTEAAAGYRRVESFLQRVVARVGEVAIGEIDPEFGV 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL--- 401
AL +DL +A+ +H + R + A +LG++ EH
Sbjct: 342 ALDDDLGVPAALAVVHNVVRHGNTALESGDGAAALAAASSVRAMMGVLGVDPLDEHWATA 401
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + +Q R K +++AD +R +L G + D +
Sbjct: 402 GDDSAATSALDVLVRAELQRRADARAAKDWATADGVRDRLAQAGVEVTDTPDGAQWA 458
>gi|296118937|ref|ZP_06837510.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
gi|295968035|gb|EFG81287.1| cysteine--tRNA ligase [Corynebacterium ammoniagenes DSM 20306]
Length = 473
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 148/475 (31%), Positives = 228/475 (48%), Gaps = 44/475 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I++T R + +F+ I P + +Y+CG T HIG+ R + FD++ R L +
Sbjct: 13 NLRIFDTATRSLRDFEPITPGHASIYLCGATPQAKPHIGHLRSGVAFDIVRRWLMAQGLD 72
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +VRN+TDIDDKI+ +A + N S ++F K L L P+ +P
Sbjct: 73 --VAFVRNVTDIDDKILNKAAE------HNRPWWEWVSTYEREFTKAYNTLGVLPPSVEP 124
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +PQM+ +Q +I G AY + + FD ++ N + ++ +
Sbjct: 125 RATGFVPQMVEYMQRLIDRGFAYASEGSVYFDVAAWVNAEGSDYGSLSGNRVEDMEQGET 184
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG FDIHGGGLDL
Sbjct: 185 DVIGKRSPQDFALWKAAKPGEPSWPTPWGAGRPGWHLECSAMSTYYLGSSFDIHGGGLDL 244
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A ANIW+HN ++ + G KMSKS GN + ++ LL+ +
Sbjct: 245 QFPHHENEIAQSHAAGDG--FANIWMHNHWVTMAGEKMSKSLGNVLAVDNLLDIVR---- 298
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDPAVLSAL 355
+R + HYR ++++ LTEA + + G A+
Sbjct: 299 ---PQELRYYLGSAHYRSVLEYSEGALTEAAAGYRRIEEFLARFDDVALGEWTDGFEKAM 355
Query: 356 YNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCKEHLNK--- 403
+D + A+ +H RE K L A ILG + ++
Sbjct: 356 NDDFSVPKALAEIHVAVREGNKALSASDEDTARTLAESVRRMAEILGFDPLSHQWSEGAS 415
Query: 404 -------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ ++ R K ++ AD +R +L G + D +
Sbjct: 416 DDSAALDALDVLVQAELERRAQARAEKNWAVADEVRDRLAQAGITVTDSADGATW 470
>gi|328884016|emb|CCA57255.1| Cysteinyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 466
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 160/482 (33%), Positives = 247/482 (51%), Gaps = 48/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P ++ +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTSARQIRDFTPLTPGHVSIYLCGATVQAAPHIGHIRSGLNFDIMRRWFDYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKII + + I +N + F L CL P+++
Sbjct: 61 D--VTFIRNVTDIDDKIIAKGADQG------RPWWSIGYENERAFNSGYDALGCLPPSYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P+MI +++ +I GHAYEA+ + FD S P Y S + ID+ +
Sbjct: 113 PRATGHVPEMIEMMRGLIERGHAYEADGSVYFDVRSFPGYLELSNQDIDDLRQPAEDGI- 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FDIHGGGLDLIF
Sbjct: 172 TGKRDPRDFAMWKATKPGEPDWETPWGRGRPGWHLECSAMAHKYLGSAFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ + A+ W+HN ++ + G KMSKS GN + ++E++ ++W
Sbjct: 232 PHHENEIAQAKAFG--DDFASYWVHNAWVTMAGEKMSKSLGNSVLVSEMV-------KAW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + L EAE ++ + PA
Sbjct: 283 RPIVLRYYLGTPHYRSMIEYSEESLREAESAFARIEGFVQRATEKAGKDVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++ H
Sbjct: 343 AEAMDDDLGVPHALAIIHTTVRQGNSALAADDKDEAIARLAEVRAMLGVLGLDPLDPHWA 402
Query: 403 KN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + ++++R + K +++AD IR QL G +ED +
Sbjct: 403 EETGGGEELHGAVDTLVRLVLEQRESARERKDWATADAIRDQLNQSGLAIEDSPDGPRWT 462
Query: 453 RM 454
Sbjct: 463 LG 464
>gi|9758060|dbj|BAB08639.1| cysteine-tRNA ligase [Arabidopsis thaliana]
Length = 500
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 174/507 (34%), Positives = 248/507 (48%), Gaps = 72/507 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++K+YNT+ ++ I P I +YVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 5 KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLD 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VT+VRN TD+DDKII+RA + + ++++ +++ D L CL PTH
Sbjct: 65 YD--VTFVRNFTDVDDKIIDRANKNG------EDPLDLSNRFCDEYLVDMGALQCLPPTH 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR + H+ +I +I+ II Y ++ F PNYG S + ++ + G RV
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL FDIHGGG DL
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+C A + N W+HNG + + KM+KS NF TI E+ +
Sbjct: 237 FPHHENEIAQTCAAC-EDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITAS------- 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ +R ++ YR P+ FT +L + L +
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYCLSPYQDALSEDGGKSEQTAEGKDII 348
Query: 347 --IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLPIF------------------ 385
+ S + +DLNT + A + + L
Sbjct: 349 KKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMSMLVSLVEIEKA 408
Query: 386 -NASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYI 431
+LG+ E+ KE K + I +L++ER+ K K F+ +D I
Sbjct: 409 AREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITARKNKDFAKSDEI 468
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
R++L KG L D + T W+
Sbjct: 469 REKLTRKGIALMD------IGKETVWR 489
>gi|284989249|ref|YP_003407803.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
gi|284062494|gb|ADB73432.1| cysteinyl-tRNA synthetase [Geodermatophilus obscurus DSM 43160]
Length = 467
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 160/481 (33%), Positives = 231/481 (48%), Gaps = 48/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + EF + +YVCG TV H+G+ R + FDVL R L
Sbjct: 1 MSLRLYDTAARAVREFTPLRAGQASVYVCGLTVQGPPHVGHVRAALSFDVLRRWLTASGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN+TDIDDKI+ +A + N + L L PT++
Sbjct: 61 E--VTYVRNVTDIDDKILVKAAERGV------PWWAWAYTNELACTRAYDVLGVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+P M+ L++ +I GHAY + ++ FD S P YG+ + +K++ +
Sbjct: 113 PRATGHVPDMVELMERLIDRGHAYAVDGDVYFDVRSFPEYGALTGQKLENLEPAADTGTD 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W +PWGRGRPGWH+ECSAM+ YLG FDIHGGGLD
Sbjct: 173 ERKRDPRDFALWKAHKDGEPQTAAWATPWGRGRPGWHLECSAMAERYLGPEFDIHGGGLD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE AQS A A W+HNG++ L G KMSKS GN ++E+++ +
Sbjct: 233 LRFPHHENEQAQSRAAGDG--FAQYWLHNGWVTLGGEKMSKSLGNTALVDEVVQRVR--- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDP 349
+R ++ HYR I+FT L EA + +
Sbjct: 288 ----PVELRYYLVAPHYRSTIEFTDAALEEAGAAYRRIESFVKRAAERVGADAGSPVLCA 343
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH 400
+AL +DL T +A+ A+H+ RE L A +LG++ H
Sbjct: 344 DFTAALDDDLGTPAAVAAVHEAVREGNTALAEGNEKAVAGALGSVRAMLGVLGLDPLDPH 403
Query: 401 L---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + +++R K +++AD IR QL + G +ED
Sbjct: 404 WAAAGGGDRLGEVADGLVALALEQRQAARARKDYAAADAIRDQLAALGVQVEDTPQGPRW 463
Query: 452 Q 452
+
Sbjct: 464 E 464
>gi|255262212|ref|ZP_05341554.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
gi|255104547|gb|EET47221.1| cysteinyl-tRNA synthetase [Thalassiobium sp. R2A62]
Length = 460
Score = 349 bits (896), Expect = 5e-94, Method: Composition-based stats.
Identities = 189/452 (41%), Positives = 257/452 (56%), Gaps = 16/452 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++NT R +F +DP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 1 MTIRLHNTKTRTKEDFTPLDPDNVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
VTYVRN TD+DDKI A ++ + D I+ + + ++ D L L P
Sbjct: 61 ADHVTYVRNFTDVDDKINATALARQEAGAKGSLEDLIAERSDETISWYLADMGALGALEP 120
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PRAT +I M+ +I+ +I GHAY +F S YG+ S R +D+ G RV
Sbjct: 121 NHAPRATAYIAPMVAMIEGLIEGGHAYAKEGHALFRVRSYKEYGALSGRSVDDMIAGARV 180
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK ST +PGW+SPWGRGRPGWHIECSAM+ LG FDIHGGG D
Sbjct: 181 EVAPFKEDPMDFVLWKPSTEDQPGWDSPWGRGRPGWHIECSAMAYDLLGPAFDIHGGGND 240
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS C A +W+HN L +EG+KMSKS GNF T+ +LL+
Sbjct: 241 LQFPHHENEIAQSKCCG--HDFAQVWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIIDPAVLSALYN 357
+ P VIR ML THYR+P+D+T ++ EAE L KW + + + AL +
Sbjct: 293 QGVPGEVIRFVMLSTHYRKPMDWTDKKRAEAETTLRKWRKLTDGVALDMGQERASDALAD 352
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNISIAIEKLVQER 416
D+N I +H LA + + L A +LG + + ++ +E R
Sbjct: 353 DVNVSEVIMRMHSLASQG--DAAALKATGAMIGLLGDNIGDWVVGGADLQAYVELFNATR 410
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ K F++ D ++ +L G + K
Sbjct: 411 SAATENKDFAAVDALKARLTEAGVEVRMSKEG 442
>gi|194334830|ref|YP_002016690.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
gi|194312648|gb|ACF47043.1| cysteinyl-tRNA synthetase [Prosthecochloris aestuarii DSM 271]
Length = 481
Score = 349 bits (895), Expect = 5e-94, Method: Composition-based stats.
Identities = 161/496 (32%), Positives = 230/496 (46%), Gaps = 61/496 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R EF + + MYVCGPTVY AH+G+A+ + FDV+ + LR+
Sbjct: 1 MSLWIYNSLNRVKEEFIPLQDGVVTMYVCGPTVYGHAHLGHAKSYVSFDVVAKWLRHSGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y++NITD+ +DKI +AR+E I T+ + +D
Sbjct: 61 --RVKYIQNITDVGHLTDDSDEGEDKIARQARKERID------PMEIAQYYTRSYYEDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P P AT HIP + LI +I GHAYE N + F S YG S R +E
Sbjct: 113 RLGIDRPNIAPTATGHIPDQVNLISTLIEKGHAYEVNGNVYFSVESFKEYGKLSGRTTEE 172
Query: 173 -QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
++ G RV + K++PADF LWK++ P W+SPWG G PGWH ECSAM+ YLG+
Sbjct: 173 ARQSGGRVETRSEKRHPADFALWKKAEPGHLMKWDSPWGSGYPGWHAECSAMAMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQS A + W+HN + + G KM KS GNFI + +
Sbjct: 233 IDIHGGGMENKFPHHECEIAQSEAATG-KPYVRYWMHNNMVTVNGTKMGKSLGNFINLKD 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---- 346
+ + + VIR +L +HYR P+DF+ + + L K T T
Sbjct: 292 IF-------KRFAPVVIRFFILQSHYRSPLDFSETAIDASRTGLEKLQDTWTRLQQAAPG 344
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFN 386
+ A+ +D NT AI L LA+ + +F
Sbjct: 345 SGEIETRPFQERLTEAMNDDFNTPIAIAVLFDLAKAVNTAIAAPSGLNQDSLDRCISLFR 404
Query: 387 ASA-HILGIEVC--------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ +LGI + + + L+ R K + +D IR +L
Sbjct: 405 SFGEEVLGILQNPATEKGKTNNEDEETLDTVMNLLIDIRSRARSGKDYELSDLIRDKLAE 464
Query: 438 KGFILEDYKNPDNGQR 453
G ++D + R
Sbjct: 465 AGITMKDTREGTEWSR 480
>gi|15892034|ref|NP_359748.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
gi|21264013|sp|Q92JF6|SYC_RICCN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15619152|gb|AAL02649.1| cysteinyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
Length = 459
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 193/476 (40%), Positives = 272/476 (57%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVY HIGN+R +V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNITD+DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKAVKYVRNITDVDDKIIDRAA------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDL----LPIFNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ +K + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAIITCANFIGLMNKTPHEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +LV +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRPDGT-----TIWRKE 459
>gi|225468582|ref|XP_002263803.1| PREDICTED: hypothetical protein isoform 1 [Vitis vinifera]
gi|296087508|emb|CBI34097.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 179/514 (34%), Positives = 260/514 (50%), Gaps = 81/514 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNT+ ++ F+ + + MYVCG T YD +H+G+AR + FDVLYR L++ E
Sbjct: 6 ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYE 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN TD+DDKII RA + + + ++S+ Q+++ D T L CL PT QP
Sbjct: 66 --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQQP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++H+ Q+ +I II + AY + ++ F PNYG S RK+++ + G RV
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDS 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSC A E + W+HNG + KMSKS GNF TI ++ + +
Sbjct: 238 HHENEIAQSCAAC-QESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------------------ 339
+R +L THYR P+++++ +L A + Q
Sbjct: 290 PLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSPFQEVNGQNVCITP 349
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLL--------------- 382
+ + + +DL+T + +L + R ++L
Sbjct: 350 AAKDCISKLQTDFQTKMSDDLSTPHILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQS 409
Query: 383 -----PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKK 424
+LG+ EV ++ K + + L++ER + K K
Sbjct: 410 LTELEKEVKGVLSVLGLLSTLAYSEVLQQLKGKALRRAGMIEDDVLHLIEERALARKNKN 469
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
FS D IR L SKG L D + T W+
Sbjct: 470 FSRGDQIRADLASKGIALMD------VGKETIWR 497
>gi|167045369|gb|ABZ10025.1| putative tRNA synthetases class I (C) catalytic domain protein
[uncultured marine microorganism HF4000_APKG10F13]
Length = 447
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 162/468 (34%), Positives = 234/468 (50%), Gaps = 58/468 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVY+ H+G+AR + FD + R L + V +++N TDIDDKII RA +E
Sbjct: 1 MYVCGLTVYNDMHLGHARSYVSFDAIRRWLEHSGY--SVEHIQNHTDIDDKIIARAAEEG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
A + + + + D T L L P PRAT ++ QM+ +I +++ GHAY
Sbjct: 59 V------APADLAERYIARTTADLTALGVLPPHQMPRATAYVEQMVAVIADLLAKGHAYV 112
Query: 148 ANN-------EIIFD-TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
A ++ FD S+ +G+ + + ++E + G RV K NPADF LWK +
Sbjct: 113 AEPAEGALAPDVYFDVPSAREQFGTLTGQSLEELEAGARVAVDPRKHNPADFALWKGARE 172
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
EP W+SPWG GRPGWHIECSAMS LG FDIHGGG DL FPHHE+EI Q+ C
Sbjct: 173 GEPSWDSPWGTGRPGWHIECSAMSLTLLGPQFDIHGGGSDLKFPHHESEILQTECHTGKH 232
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
W+H GFL ++ KMSKS NF + ++L+ A V+R +L HYR P
Sbjct: 233 PMVKYWLHTGFLTVDEEKMSKSLDNFFLVRDVLQYA-------SAEVVRFYLLNAHYRSP 285
Query: 320 IDFTVQRLTEAEILLSKWPQT-----------------STSKGIIDPAVLSALYNDLNTV 362
IDF+ L EA + T + +A+ +D NT
Sbjct: 286 IDFSDAALDEAASAHDRLAATLHRYRTASGGDRQPEALHDAVTTARADFTTAMDDDFNTR 345
Query: 363 SAIQALHKLARESTK------NHDLLPIFNAS-----AHILGIEVCKEHLNKNISIAIEK 411
A+ AL LARE+ + + +L A+ +LG+ +E IE
Sbjct: 346 EALAALFGLAREANRYEPGTLDSELRDAVVAAFEELGGEVLGLFAPREATGPG-DAEIEA 404
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
L+ +R K+++ AD IR +L ++G ++D + RW++
Sbjct: 405 LLAQREAARAAKEWAEADRIRDELTAQGIEVQDTPD------GVRWRR 446
>gi|288801920|ref|ZP_06407362.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
gi|288335962|gb|EFC74395.1| cysteine--tRNA ligase [Prevotella melaninogenica D18]
Length = 495
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 164/501 (32%), Positives = 228/501 (45%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQHYTNRYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ I+ +G+AYE+N I FD S R
Sbjct: 113 RSLNVLPPSIEPHATGHIIEQEELVKQILANGYAYESNGSIYFDVEKYDKDHHYGVLSGR 172
Query: 169 KIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I + +R +K DF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NITDMINNSRELAGVGEKRNQIDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DLIFPHHE EIAQ+ + E W+HN + + G+KM KS GNFI
Sbjct: 233 LGDHFDIHGGGMDLIFPHHECEIAQAVASQGDE-MVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ + +++ IR +L HYR +DF+ + L AE +
Sbjct: 292 TLEQFFTGEHDTLTQAYSPMTIRFFILSAHYRGTVDFSNEALQAAEKGYERLMNGIEDLA 351
Query: 346 IIDP-----------------AVLSALYNDLNTVSAIQALHKLAREST---------KNH 379
I P A+ +DL T + I L +
Sbjct: 352 RIQPAAASDENTKKFVAGFRQKCYDAMNDDLMTPAVISTLFEACHLVNILIDHKAQISVD 411
Query: 380 DLLPIFNAS----AHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
DL + A ILG++ + N A ++ ++ R K ++ +D I
Sbjct: 412 DLKELTEAMQLFAFDILGLQNERGANNDAREEAYGKVVDMVLDLRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ +
Sbjct: 472 RDALAEAGFQVKDTKDGVTWK 492
>gi|33519768|ref|NP_878600.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
gi|61216292|sp|Q7VRB4|SYC_BLOFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33504113|emb|CAD83375.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia floridanus]
Length = 474
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 173/493 (35%), Positives = 243/493 (49%), Gaps = 57/493 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL +K F++I I++YVCG TVYD H+G+AR ++FD + R L++Y +
Sbjct: 1 MLKIFNTLTKKKEIFKSIKCGEIKIYVCGITVYDLCHLGHARTFVIFDTILRYLKHYGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII+RA + N+ + S+ Q+ D L L P ++P
Sbjct: 61 --VKYVRNITDIDDKIIQRAIKN------NETTDHLASRMIQEMYLDLDILNILRPNYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ T+HI +I I+ +I HAY ++ ++F ++ NYG S K ++ + K
Sbjct: 113 KVTDHIELIINFIRLLIERNHAYVTSDGNVMFSIQTVYNYGVLSCHKKNQTFTQRNIRNK 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF+LWK + EP W SPWG+GRPGWHIECSA+S +LGK DIHGGG DL+F
Sbjct: 173 MIKKDPVDFVLWKTAKSGEPYWISPWGKGRPGWHIECSAISHAFLGKHIDIHGGGSDLVF 232
Query: 243 PHHENEIAQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
PHHENEIAQS CA I + N WIH G L KMSKS NF TI E++ +
Sbjct: 233 PHHENEIAQSTCAHHITVDSYVNTWIHTGMLTFNDEKMSKSLNNFFTIREII-------Q 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-------- 352
+ IR +L HYR+P+ ++ + A + L L
Sbjct: 286 KYDPETIRYFLLSAHYRKPLRYSDNNIKNARLSLKHLYSALHGINFNPIVQLYDNNSEKY 345
Query: 353 ------SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCK 398
+ + ND N A L ++A + L A+ILGI
Sbjct: 346 FISKFNNKMNNDFNFPEAYSILFEMAHALNIAKIKDHVRAKSLAAHLKYLANILGILYQD 405
Query: 399 EHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ I +L+ R K K++ +D IRK+L G ILED
Sbjct: 406 PEIYLGYNTCIKNNKQSLTVEKIRELIYMRENARKNKEWQLSDKIRKRLTEIGIILEDKP 465
Query: 447 NPDNGQRMTRWKQ 459
T W+
Sbjct: 466 TGK-----TIWRY 473
>gi|228970278|ref|ZP_04130937.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228789387|gb|EEM37307.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
Length = 440
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 166/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I IQ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ F T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYFRTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTSTS---------------------KGIIDPAVLSALYNDLNTVSAIQ 366
L + + A A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ +A + + + ILG+E+ +E L + IE L+Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSTVVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKDRNIILEDT------AQGTRWKR 439
>gi|254474999|ref|ZP_05088385.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
gi|214029242|gb|EEB70077.1| cysteinyl-tRNA synthetase [Ruegeria sp. R11]
Length = 525
Score = 349 bits (895), Expect = 6e-94, Method: Composition-based stats.
Identities = 193/462 (41%), Positives = 263/462 (56%), Gaps = 23/462 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR YG
Sbjct: 61 IKLHNTRTRGKEVLDPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLREVYGPD 120
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V+Y RN TD+DDKI A ++ + + + T + ++ D L L P H
Sbjct: 121 HVSYARNFTDVDDKINATAVARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 180
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT +IPQMI +I+ +I GHAY ++F S +YG+ S R +D G RV
Sbjct: 181 MPRATAYIPQMIAMIEELIAKGHAYPDGAGHVLFSVKSYKDYGALSGRSVDAMIAGARVE 240
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGW+SPWGRGRPGWHIECSAMS G+ FDIHGGG DL
Sbjct: 241 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGESFDIHGGGNDL 300
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA A IW+HN L +EG+KMSKS GNF T+ +LLE +
Sbjct: 301 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------Q 354
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---YN 357
+P VIR L THYR+P+D+T ++ EAE L KW + A + + +
Sbjct: 355 GYPGEVIRFVFLQTHYRKPMDWTDKKAKEAEATLRKWRALTAGIEPAPSAAAAVIAALSD 414
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-----EHLNKNISIAIEKL 412
DLNT A+ LHKLA D + ASA ++G+ + + ++S+ + L
Sbjct: 415 DLNTAGAVAELHKLA----SGGDAASLL-ASAQLMGLLTEELGAWAKGEEVDLSVYEKAL 469
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R + ++ K F+ D ++ G + K
Sbjct: 470 FDARTVAMESKDFAEVDRLKSAYLEAGVEVRMSKAGVELVPG 511
>gi|149926799|ref|ZP_01915058.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
gi|149824351|gb|EDM83569.1| cysteinyl-tRNA synthetase [Limnobacter sp. MED105]
Length = 441
Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats.
Identities = 169/461 (36%), Positives = 233/461 (50%), Gaps = 50/461 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYDF H+G+AR M+VFD+L R LR VTYVRNITDIDDKII RA +
Sbjct: 1 MYVCGMTVYDFCHLGHARVMVVFDLLKRWLRASGY--PVTYVRNITDIDDKIIRRAVENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++I +T + +D L P H+PRAT ++ +M +IQ ++ AY
Sbjct: 59 ------ESIRSLTDRFIAAMHEDADALGIERPDHEPRATEYVAEMQDMIQTLMNKRLAYR 112
Query: 148 AN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---G 203
+ ++ F + P YG S + +DE + G RV K +P DF+LWK + EP
Sbjct: 113 DDSGDVNFAVRAFPEYGRLSGKSLDELRAGERVGVSGSKNDPLDFVLWKSAKADEPADAK 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W+S +G GRPGWHIECSAMS LG FDIHGGG DL FPHHENEIAQS A E A
Sbjct: 173 WDSDFGVGRPGWHIECSAMSCKLLGNTFDIHGGGADLQFPHHENEIAQSVGATG-EGFAQ 231
Query: 264 IWIHNGFLNLEGR----KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
W+HNGF+ +E KMSKS NF TI ++L + + A V+R +L YR
Sbjct: 232 YWMHNGFVRVETNGQSEKMSKSLNNFFTIRDIL-------KVYDAEVVRFFILRAQYRSQ 284
Query: 320 IDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLSALYNDLNTVSAIQALHK 370
+ ++ + +A+ L + + A+ +D+NT A+ L +
Sbjct: 285 LTYSEAHVQDAKAALGRLYTAVGDVQVAQSIDWTQEFEARFAEAMNDDMNTPIAVSVLFE 344
Query: 371 LARESTKNHD--LLPIFNASAHILGIE----------VCKEHLNKNISIAIEKLVQERLI 418
+A E + D L A A +LG+ + I+ L+ R
Sbjct: 345 MANEVNRTADQTLAARLKALAQVLGLLGRTAEAFQKAEVGDQAGALDEAEIQALIDARAQ 404
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ FS AD IR+QL G +LED + T W++
Sbjct: 405 AKADRDFSKADAIRQQLLDMGVVLEDKRGGA-----TEWRR 440
>gi|153005356|ref|YP_001379681.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|171769386|sp|A7HDA1|SYC_ANADF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|152028929|gb|ABS26697.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 482
Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats.
Identities = 168/503 (33%), Positives = 243/503 (48%), Gaps = 66/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I +TL E Q I+P IR Y CGPTVYD AH+G+ R +V+D++ R LR
Sbjct: 1 MPIVISDTLTGTKRELQPIEPGKIRFYACGPTVYDSAHVGHGRSYVVWDLVVRHLRARGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TD+DDKII RA + + + ++ ++F +D L L P
Sbjct: 61 E--VRYVRNFTDVDDKIIRRATER------REDPVALAARYAREFDEDMDALGNLRPDVA 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+ + H+PQ++ +I +++ G AY AN ++ F + P+YG S+R +D+ G RV
Sbjct: 113 PKVSEHVPQIVAMISSLVEKGFAYAAANGDVYFSVRAFPDYGRLSKRNLDDLLSGARVEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+ +LG D+HGGG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPTWDSPWGGGRPGWHIECSAMTLAHLGVPIDLHGGGKDLV 232
Query: 242 FPHHENEIAQSCCADRI----EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
FPHH NEIAQS A E W+H+GF+ ++ KMSKS GNF T+ ++L
Sbjct: 233 FPHHTNEIAQSAAAVGDGRTAESFCRHWMHHGFVEIDSEKMSKSLGNFFTLRDVLA---- 288
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ A +RL L THYR PI+++ L EAE L+ + +T +
Sbjct: 289 ---KFDAEGVRLFYLGTHYRNPINYSDAILAEAERRLNYFYETLEKVDALAEGTSPAGEG 345
Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------------FNASA 389
AL +D N + L + + D
Sbjct: 346 GGVVEDARRALDDDFNAPQVLAVLAEAFTAANALADKRGKKTPEDRARLAAFARDVREIG 405
Query: 390 HILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
LG+ + ++E + ER + + F+ +D IR L +
Sbjct: 406 TTLGLVQRRPAEALRAIRARAAARRGIDPASVEAKIVERAEARRARDFARSDAIRDALLA 465
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
+G L D G + T WK +
Sbjct: 466 QGVALMD------GPQGTTWKVE 482
>gi|307564821|ref|ZP_07627349.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
gi|307346543|gb|EFN91852.1| cysteine--tRNA ligase [Prevotella amnii CRIS 21A-A]
Length = 495
Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 231/501 (46%), Gaps = 59/501 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL RK FQ I ++ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQDLVIYNTLHRKKELFQPIAAPHVGMYVCGPTVYGDPHLGHARPAITFDILFRYLQHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T +
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIAKKARLEQLE------PMEIAQHYTNSYHDAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L P+ +P AT HI + L++ II +G+AY++N + FD + S R
Sbjct: 113 HALNVLPPSIEPHATGHIIEQEQLVEEIINNGYAYQSNGSVYFDVAKFNEKHKYGVLSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ +R K+N DF LWKR+ P W S W G PGWH EC+AM Y
Sbjct: 173 NLNDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSQWSEGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGG+DL+FPHHE EIAQ+ + + W+HN + + G+KM KS GNFI
Sbjct: 233 LGNHFDIHGGGIDLVFPHHECEIAQAVASQG-DDMVKYWMHNNMITINGQKMGKSLGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------- 338
T+NE K +++ IR ++ HYR +DF+ L A+ K
Sbjct: 292 TLNEFFSGKHKSLDQAYSPMTIRFFIISAHYRSTVDFSNDALKAAQKGYEKLMNGIEDLK 351
Query: 339 ----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-- 386
T + A+ +DL T + I L + D +
Sbjct: 352 KIQTSTESDANTKMFVNSLRKKCYDAMNDDLMTPAVISLLFEACHVINLLIDHKAQISLS 411
Query: 387 -----------ASAHILGIEVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYI 431
+ ILG+ + N+ A ++ +++ R K ++ +D I
Sbjct: 412 DSKELTEVMNIFAFDILGLRNERSINNEAREEAFGKVVDMVLELRAKAKAEKNWAVSDQI 471
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R L GF ++D K+ + +
Sbjct: 472 RNALSEAGFQVKDTKDGVSWK 492
>gi|325106147|ref|YP_004275801.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
gi|324974995|gb|ADY53979.1| cysteinyl-tRNA synthetase [Pedobacter saltans DSM 12145]
Length = 486
Score = 349 bits (895), Expect = 7e-94, Method: Composition-based stats.
Identities = 160/501 (31%), Positives = 231/501 (46%), Gaps = 58/501 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IYNT+ RK EF+AI+P + MYVCGPTVY H+GN R I FD++YR L +
Sbjct: 1 MYDSLFIYNTISRKKEEFKAINPPYVGMYVCGPTVYSDVHLGNCRTFISFDLIYRYLMHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD +DKI ++A+ I T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDGDSGEDKISKKAKLASLE------PMEIVQTYTNGFHDM 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L P+ +P AT HI + I +++ I+ G AYE + + FD + + +
Sbjct: 113 MKVFNVLPPSIEPTATGHIIEQIEMVKTILAKGLAYEVDGSVYFDVEKYNQHHNYGVLNG 172
Query: 168 RKIDEQKMGTRVPEKYHKKNPA-DFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
RK+++ TR +K+ DF LW K W SPWG G PGWH+ECSAMSS
Sbjct: 173 RKLEDLLNNTRELGGQDQKHGKLDFALWIKAKPEHLMQWPSPWGMGFPGWHLECSAMSSK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL HH NEIAQ+ A AN WIH L + G+KMSKS GN
Sbjct: 233 YLGEQFDIHGGGMDLAPTHHTNEIAQNVAACGKHP-ANYWIHTNMLTVNGQKMSKSLGNS 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
+EL + + + V++ ML HYR +DF+ + L +E +
Sbjct: 292 FLPHELFTGQHELLNKGYSPMVVKFFMLQAHYRSTLDFSNEALDASEKGFKRLMNALGLL 351
Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
I+ SA+ +D N+ I L + + +D + +
Sbjct: 352 DKLKVSETSEVDLKAIEQRFESAMNDDFNSPILIAELFDVVKTINSIYDGKTSISEADLI 411
Query: 390 -----------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+ILG++ N+ I + L+ R + K ++++D IR L+
Sbjct: 412 GLTSLLNEYVHNILGLKDELSEGNE-IEPLMNFLINIRKEAKEKKDYATSDKIRIGLQEI 470
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G+ L+D K T W +
Sbjct: 471 GYQLKDSK------EGTTWSK 485
>gi|293378885|ref|ZP_06625040.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
gi|292642426|gb|EFF60581.1| cysteine--tRNA ligase [Enterococcus faecium PC4.1]
Length = 446
Score = 348 bits (894), Expect = 7e-94, Method: Composition-based stats.
Identities = 160/470 (34%), Positives = 239/470 (50%), Gaps = 62/470 (13%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNAR I FD + R Y V +V N TD+DDKII A +
Sbjct: 1 MYVCGPTVYNYIHIGNARSTIAFDTIRRYFEYRGY--KVDFVSNFTDVDDKIIRTANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ P + + + F +DT L T PR +H+P ++ IQ ++ G+AYE
Sbjct: 59 IAAP------EVADRFIRAFEEDTKALNVEPATLHPRVMDHMPDILAFIQVLVEKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD---FILWKRSTPMEPGW 204
++ ++ + T NYG S + IDE ++G ++ D F LWK++ P E W
Sbjct: 113 SSGDVYYRTRKFENYGKLSDQSIDELEVGASQRTGEEQQQKEDPLDFALWKQAKPGEISW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+SPWG+GRPGWHIECS M++ +LG+ DIHGGG DL FPHHENEIAQS +K AN
Sbjct: 173 DSPWGKGRPGWHIECSVMATKHLGETIDIHGGGQDLEFPHHENEIAQSEAKTG-KKFANY 231
Query: 265 WIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+HNG++ + + KMSKS GNFIT++E++ ++ V+R M T YR PI +
Sbjct: 232 WMHNGYVTIGEDDEKMSKSLGNFITVHEMI-------QNVDPQVLRFFMATTQYRRPIRY 284
Query: 323 TVQRLTEAEILLSKWPQTSTSK---------------------GIIDPAVLSALYNDLNT 361
+ + EA L + T + ++ + + +D N
Sbjct: 285 SETTMKEAATNLQRLKNTFDNLKFRQETASENLADDADKITLLENLEQRFIEEMDDDFNA 344
Query: 362 VSAIQALHKLARESTKNHDLL-----------PIFNASAHILGIEVCKEHLNKNISIAIE 410
+ I +++LA+ D +F+ I GI E L + IE
Sbjct: 345 ANGITVVYELAKWLNTYLDQAEVSAAVLAQGEALFSQWLSIFGILFTAEEL---LDEEIE 401
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+L++ER + F+ +D IR L+ KG +LED + TRW+++
Sbjct: 402 QLIEERNQARSNRDFARSDEIRDLLKEKGILLEDT------PQGTRWRRE 445
>gi|157964147|ref|YP_001498971.1| cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
gi|187630859|sp|A8F0I8|SYC_RICM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157843923|gb|ABV84424.1| Cysteinyl-tRNA synthetase [Rickettsia massiliae MTU5]
Length = 459
Score = 348 bits (894), Expect = 8e-94, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 269/476 (56%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVYD HIGN R +V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNGRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNIT++DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKTVKYVRNITNVDDKIIDRAE------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT H MI +I+ +I HAY +N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHTDVMIAIIERLIAKEHAYVVDNHVYFDVLSAPNYTELSNRSLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFITI +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITIRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLAR--ESTKNHDL----LPIFNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ +K + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFISKTEEERQLNASAIITCANFIGLMNKTPHEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I + V +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYINEFVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDQPDGT-----TIWRKE 459
>gi|228470387|ref|ZP_04055290.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
gi|228307969|gb|EEK16852.1| cysteinyl-tRNA synthetase [Porphyromonas uenonis 60-3]
Length = 492
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 160/499 (32%), Positives = 236/499 (47%), Gaps = 57/499 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IYNTLER F+ I P ++ +YVCGPTVY H+G+AR I FD+L+R L++
Sbjct: 1 MSQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRN+TD+ +DKI ++A+ E + ++
Sbjct: 61 Y--KVRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE------PMEVAYYYLNRYHDSL 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L L P+ +P A+ HI + I L+Q I+ G+AY + + FD + YG S R
Sbjct: 113 RLLNVLPPSIEPLASGHIIEQIQLVQQILDAGYAYVSEGSVYFDVLKYHADHPYGILSGR 172
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ TR + + NP DF LWK++ P W SPW G PGWH EC+AM Y
Sbjct: 173 NVEDMISNTRELDGQDEKHNPLDFALWKKAQPSHIMRWPSPWSEGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGGLDL FPHHE EIAQ+ + E W+HN + ++G+KM+KS GNFI
Sbjct: 233 LGAHFDIHGGGLDLTFPHHECEIAQAVASQG-EPMVKYWMHNNMITVDGKKMAKSAGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ E +++ IR +L HYR +DF+ L AE +
Sbjct: 292 TLEEFFTGNHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQ 351
Query: 346 IIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPI 384
+ P A+ +D+NT I AL AR HD L
Sbjct: 352 SLKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEE 411
Query: 385 FNA-----SAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + + + A++ L+ R K + ++D IR
Sbjct: 412 LRKTYDLYLHDILGMQSATEASDLSGSQQEAFAGAVDLLLDIRSKAKASKDWETSDLIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 KLTALGFEIQDTKSGAEWK 490
>gi|34580931|ref|ZP_00142411.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
gi|28262316|gb|EAA25820.1| cysteinyl-tRNA synthetase [Rickettsia sibirica 246]
Length = 459
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 192/476 (40%), Positives = 269/476 (56%), Gaps = 33/476 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVY HIGN+R +V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYYNPHIGNSRSGVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+GEK V YVRNITD+DDKII+RA + I +T K T++F K+ L C+ P+
Sbjct: 61 FGEKAVKYVRNITDVDDKIIDRAA------LLGVTIDELTDKVTKEFHKNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G V
Sbjct: 115 IEPKATKHIDVMIAIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVHVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A W+HNGFL + G KMSKS GNFIT+ +L+
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPSSTYAKYWVHNGFLTVNGEKMSKSLGNFITVRDLMN---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLS 353
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENINVQKIDLPHDFMQ 348
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGI--EVCKEHLNKNI 405
+L +D+NT A++ ++ A+ + A+ +G+ + E N +
Sbjct: 349 SLLDDMNTPLAVKIINDYAKGVFSSKTEEERQLNASAIITCANFIGLMNKTPHEWFNSGV 408
Query: 406 SIA-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +LV +RL K K + AD IR QL + ILED + T W+++
Sbjct: 409 DELYVNELVNKRLEAKKQKNWLLADQIRNQLLEEKIILEDRSDGT-----TIWRKE 459
>gi|332637987|ref|ZP_08416850.1| cysteinyl-tRNA synthetase [Weissella cibaria KACC 11862]
Length = 471
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 158/493 (32%), Positives = 239/493 (48%), Gaps = 60/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K +NT+ + F I+ I MYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MMKTFNTMSLEKETFTPINEKTINMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I A ++ ++P + K F +DT L T +P
Sbjct: 61 --VNYVSNFTDVDDKMIAAASEQGITVP------ELADKYIDAFNEDTAPLNIKPATVRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HIP++I ++++I G+AYE+ ++ F YG + + + E +
Sbjct: 113 RATEHIPEIIEFVEDLIKKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMESNAAGRLDD 172
Query: 184 ----HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF +WK W SPWG+GRPGWHIECS MS+ YLG DIHGGG+
Sbjct: 173 GELARKEDPMDFAVWKGENGDGAIAWNSPWGKGRPGWHIECSVMSTKYLGNHLDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKK 296
DL FPHH NEIAQ+ + W+HNGF+ + E KMSKS GNF T++ELL+
Sbjct: 233 DLAFPHHTNEIAQTEAHTGEKFVEK-WLHNGFVTVGDENEKMSKSLGNFTTVHELLQQID 291
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------- 343
V+R + T YR PI ++ + + A L + +
Sbjct: 292 ------DPMVLRFFIATTQYRRPIAYSQKNMDLAARNLERIRTGYRNLQFRLGSAVAGSD 345
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFN 386
A + A+ +D N +A+ A+++L + L
Sbjct: 346 ADIEAKAQEKVDAFVEAMDDDFNAQNAMTAVYELIELANLYSQAEEVKTDTVNFVLKQIK 405
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
++ G++ ++ + ++ L++ER + F+ +D IR +L S+G ILED
Sbjct: 406 DLMNVFGVDGLEQA--PLLDADVDALIKERDAARETSNFARSDEIRDELASRGIILEDT- 462
Query: 447 NPDNGQRMTRWKQ 459
+ TRW++
Sbjct: 463 -----PQGTRWRR 470
>gi|191639246|ref|YP_001988412.1| cysteinyl-tRNA synthetase [Lactobacillus casei BL23]
gi|239630171|ref|ZP_04673202.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|187631657|sp|Q035S0|SYC_LACC3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558712|sp|B3WA35|SYC_LACCB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|190713548|emb|CAQ67554.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Lactobacillus casei BL23]
gi|239527783|gb|EEQ66784.1| cysteinyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|327383326|gb|AEA54802.1| Cysteinyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|327386509|gb|AEA57983.1| Cysteinyl-tRNA synthetase [Lactobacillus casei BD-II]
Length = 468
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 172/493 (34%), Positives = 249/493 (50%), Gaps = 61/493 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ RK F + P IRMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLTLYNTMSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII A + +A + + F++DTT L T P
Sbjct: 60 -KVTYVSNFTDVDDKIINAAHKTG------EAPLDLAQRFIDAFMEDTTALGIEPATAHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA+ IP +I +Q++I +AY + ++ + +YG S + +DE + G
Sbjct: 113 RASQMIPDIIEFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQ 172
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ DF LWK + P E WESPWG+GRPGWHIECS MS+ LG FDIHGGG D
Sbjct: 173 DELAKKEDPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENEIAQS ++ W+HNGF+ + + KMSKS GNFIT++++
Sbjct: 233 LEFPHHENEIAQSEAKTD-KQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDI------ 285
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------P 338
++ V+R M T YR PI ++ L A L++ P
Sbjct: 286 -RKTVDPQVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDP 344
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNA 387
Q + + ++A+ +D+N + + L LA+ + +DLL ++A
Sbjct: 345 QITKQLQTLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDA 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I G+ + K++ I+ LV+ R K F+ +D IR QL ++G ILED
Sbjct: 405 WLQIFGVVFADQ---KSLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT-- 459
Query: 448 PDNGQRMTRWKQK 460
+ TRW+++
Sbjct: 460 ----PQGTRWRRQ 468
>gi|256820848|ref|YP_003142127.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
gi|256582431|gb|ACU93566.1| cysteinyl-tRNA synthetase [Capnocytophaga ochracea DSM 7271]
Length = 492
Score = 348 bits (893), Expect = 1e-93, Method: Composition-based stats.
Identities = 162/491 (32%), Positives = 234/491 (47%), Gaps = 44/491 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++KI+N+L + F + +N+ MYVCGPTVY H+GN R + FD +YR L++
Sbjct: 1 MEHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRTLKFL 60
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 61 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 178
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K+NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ E W+H L + G++MSKS GN+I E
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHG-ESPVRYWMHANMLTMNGQRMSKSTGNYILPME 297
Query: 291 LLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
L+ F + + VIR + HYR +D + + + AE ++ +
Sbjct: 298 LISGENTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAIKILNELTT 357
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLARES------------TKNHDLL 382
AL +D N+ I L + + T+ +L
Sbjct: 358 DTELPTSLPIAEWKQKCYDALLDDFNSPILIAHLFEAVKWIFQVKNDEERISVTELKELK 417
Query: 383 PIFNAS-AHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+ NA +LG++ ++ +N N + ++ L+ R+ K + +D IR +L + G
Sbjct: 418 ELMNAFVFDVLGLQSEQQTVNNNDKLDGVLQLLINMRMEARANKDWVLSDKIRDELLALG 477
Query: 440 FILEDYKNPDN 450
L+D K +
Sbjct: 478 IQLKDGKEGTS 488
>gi|291296187|ref|YP_003507585.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
gi|290471146|gb|ADD28565.1| cysteinyl-tRNA synthetase [Meiothermus ruber DSM 1279]
Length = 481
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 169/498 (33%), Positives = 235/498 (47%), Gaps = 62/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL+R+ F P + +YVCGPTVY H+G+AR IV+DVL R LRY
Sbjct: 1 MPLQIYNTLKRQKEPFVPATPGYVGIYVCGPTVYSDPHLGHARGPIVYDVLRRWLRYQGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI+ RA+ E + K + +
Sbjct: 61 --KVRFVSNITDVGHLTDDADQGEDKILRRAKLERLE------PMEVAEKYMWSYFDEMQ 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P PRA HIP+ I L + ++ GHAY N + F S P +G S R I+E
Sbjct: 113 ALNVLRPDITPRAAGHIPEQIELTEALLERGHAYVVNGSVYFRVKSWPAFGKLSNRDIEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
Q+ G RV + K++P DF LWKR+ P W SPWG G PGWHIECSAMS YLG F
Sbjct: 173 QEAGARVEVREEKEDPRDFALWKRAEPEHIMRWNSPWGEGFPGWHIECSAMSLKYLGDGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+DL FPHHE EIAQ+ A A W+H+ + L G+KM+KS GN IT+ EL
Sbjct: 233 DIHAGGVDLQFPHHEAEIAQAEAAG--HPFARYWMHHYHVLLNGQKMAKSTGNLITLAEL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
+ IR +L +HYR +DFT + L A+ +
Sbjct: 291 RAR-------YEPMYIRFYLLNSHYRSVLDFTDEGLEAAKNGYLRLLNAYREVRRLLHNA 343
Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--------- 383
+ +AL +DLNT AI A E K P
Sbjct: 344 PAGRHAGLDRAIENLRKDFANALNDDLNTAQAIAAFFNFVTELNKALTERPGRESLQAAE 403
Query: 384 -IFNASAH-ILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+F +LG+ + + + + L++ R + + F+ +D IR++L
Sbjct: 404 QVFAELGEGVLGLFPARVLEHQLGGALLDGLVNLLLEIREEARRNRNFALSDRIRERLIE 463
Query: 438 KGFILEDYKNPDNGQRMT 455
G ++ED + + T
Sbjct: 464 LGVVVEDTREGPKWKVGT 481
>gi|163736517|ref|ZP_02143936.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
BS107]
gi|161390387|gb|EDQ14737.1| hypothetical protein RGBS107_15336 [Phaeobacter gallaeciensis
BS107]
Length = 465
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 194/459 (42%), Positives = 264/459 (57%), Gaps = 17/459 (3%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT R I+P ++R+Y+CGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 4 IKLHNTRTRGKEVLNPINPDDVRLYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHVYGTD 63
Query: 65 CVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTY RN TD+DDKI A ++ + + + T + ++ D L L P H
Sbjct: 64 HVTYARNFTDVDDKINATALARKEAGAPGTLEELVQERTEETISWYLADMAELGALEPDH 123
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT +IPQMI +I+ +I GHAY ++F S +YG+ S R +D+ G RV
Sbjct: 124 MPRATAYIPQMIAMIEELIAKGHAYADGAGHVLFSVKSYKDYGALSGRSVDDMIAGARVE 183
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGW+SPWGRGRPGWHIECSAMS G FDIHGGG DL
Sbjct: 184 VADNKRDPMDFVLWKPSTDELPGWDSPWGRGRPGWHIECSAMSHELFGDSFDIHGGGNDL 243
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA A IW+HN L +EG+KMSKS GNF T+ +LL+ +
Sbjct: 244 MFPHHENEIAQSCCAHPEGDFAKIWLHNEMLQVEGKKMSKSLGNFFTVRDLLD------Q 297
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---LSALYN 357
+P VIRL L THYR+P+D+T ++ EAE L KW Q + + + ++AL +
Sbjct: 298 GYPGEVIRLVFLQTHYRKPMDWTDKKAKEAEATLRKWYQLAATALDNEEPYVGVINALSD 357
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAI--EKLVQE 415
DLNT AI LH+L + ++G + +NI + + KL
Sbjct: 358 DLNTAQAIAELHQLFHAGDAASMRASL--KFMGLMGADTPTWATGENIDLTLYERKLSDA 415
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R + ++ K FS D ++ + G + K
Sbjct: 416 REVAMQSKDFSEVDRLKAAFVAAGVEVRMSKTGVELVPG 454
>gi|313885925|ref|ZP_07819664.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
gi|312924614|gb|EFR35384.1| cysteine--tRNA ligase [Porphyromonas asaccharolytica PR426713P-I]
Length = 492
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 159/499 (31%), Positives = 237/499 (47%), Gaps = 57/499 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IYNTLER F+ I P ++ +YVCGPTVY H+G+AR I FD+L+R L++
Sbjct: 1 MSQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRN+TD+ +DKI ++A+ E + ++
Sbjct: 61 Y--KVRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE------PMEVAYYYLTRYHDSL 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L L P+ +P A+ HI + I L+Q I+ G+AY + + FD + YG S R
Sbjct: 113 RLLNVLPPSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGR 172
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ TR + + NP DF LWK++ P W SPW G PGWH EC+AM Y
Sbjct: 173 NVEDMISNTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGGLDL FPHHE EIAQ+ + E W+HN + ++G+KM+KS GNFI
Sbjct: 233 LGTHFDIHGGGLDLTFPHHECEIAQAVASQG-EPMVKYWMHNNMITVDGKKMAKSAGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ E +++ IR +L HYR +DF+ L AE +
Sbjct: 292 TLEEFFTGDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQ 351
Query: 346 IIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
+ P A+ +D+NT I AL AR HD +
Sbjct: 352 SLKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGYEQITSEQLEE 411
Query: 388 --------SAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + + + A++ L++ R K + ++D IR
Sbjct: 412 LRRAYDLYLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 KLTALGFEIQDTKSGAEWK 490
>gi|150399135|ref|YP_001322902.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
gi|166200152|sp|A6UP68|SYC_METVS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150011838|gb|ABR54290.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 475
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 159/479 (33%), Positives = 235/479 (49%), Gaps = 53/479 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNT+ + F+ ++ +++YVCGPTVYD HIG+ R + FD++ R L +
Sbjct: 1 MLRIYNTITKSEEVFKTLNNEEVKIYVCGPTVYDETHIGHGRTYVSFDIIRRYLEHIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TDIDDKII RA + +N I+ K + F+ D L P
Sbjct: 60 -SVKLVINFTDIDDKIINRA------LNLNVTPKKISEKYIEIFLNDMKTLNVKPADIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T +IP++I I +I G AY+ ++ + F+ +YG S ++ ++ K
Sbjct: 113 KVTENIPEIISFIDKLIEKGFAYKTDSGVYFEIEKFKDYGKLSNINLENLISEDKLESKS 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKN DF LWK EP W+SP+G GRPGWHIECS MS YLG+ FDIHGGG DL FP
Sbjct: 173 EKKNRFDFALWKNKKSGEPYWKSPFGDGRPGWHIECSVMSMKYLGEQFDIHGGGRDLSFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + N W+H GF+ + G KMSKS GNF+TI+E+ + +
Sbjct: 233 HHENEIAQSSAYSG-KNWVNYWVHTGFVMVNGEKMSKSLGNFVTISEI-------SKKYS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------------QT 340
V+RL + HY+ PID+T + + A+ L K
Sbjct: 285 PEVLRLFFIQRHYKSPIDYTEESMEHAKASLQKLYNVIESVRIALENPVNSVWDENEAFF 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
A+ +D N+V+A++ + +++ TK + L F
Sbjct: 345 YNVLKNSKINFYRAMDSDFNSVNALKTVFEVSNSVTKYLSVSKSPNVALLIKTLDFFKNV 404
Query: 389 AHILGIEVCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I G+ + + N+ I+ LV R L K + ++D IR L+ G+ +ED
Sbjct: 405 GEIFGLFEGYFYKSSNVKEESLIKFLVDLRDDLRSKKNYETSDKIRDGLKELGYQIEDS 463
>gi|163735857|ref|ZP_02143286.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
gi|161390943|gb|EDQ15283.1| cysteinyl-tRNA synthetase [Roseobacter litoralis Och 149]
Length = 490
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 208/494 (42%), Positives = 272/494 (55%), Gaps = 57/494 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNT R+ +F+ I+ ++RMYVCGPTVYD AH+GNARP+IVFDVLYRLLR+ YG
Sbjct: 1 MTIKLYNTKTRRKEDFEPINKDDVRMYVCGPTVYDRAHLGNARPVIVFDVLYRLLRHTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH- 121
VTYVRN TD+DDKI RA + AI IT++ TQ F+ D + L P+
Sbjct: 61 PDHVTYVRNFTDVDDKINARAAESG------RAIGEITAETTQWFLDDMAAVGALEPSIK 114
Query: 122 -------QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
PRAT +I QM+ +I+++I GHAY A ++F S YG+ S R ID+
Sbjct: 115 DRDHQRAMPRATQYIAQMVTMIEDLIAKGHAYAAEGHVLFAVESYSKYGALSGRSIDDMI 174
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESP------WGRGRPGWHIECSAMSSHYLG 228
G RV +K+NP DF+LWK S PGW P GRGRPGWHIECSAM+ LG
Sbjct: 175 AGARVEVAPYKRNPMDFVLWKPSDDATPGWAGPVVGGKSIGRGRPGWHIECSAMAHDLLG 234
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDIHGGG DL+FPHHENEIAQS CA AN+W+HN L +EG+KMSKS GNF T+
Sbjct: 235 ATFDIHGGGNDLMFPHHENEIAQSTCAG--HDFANVWMHNEMLQVEGKKMSKSLGNFFTV 292
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
+LL+ + P VIR ML THYR+P+D+T ++ EAE +S G
Sbjct: 293 RDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRKEAEKAVSDIHLVLLRAGYSP 346
Query: 349 PA---------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
V++ L +DLNT A+QAL KL + + F ASA LG
Sbjct: 347 SMVALLKKNNRWQPASEVVNFLRDDLNTHGALQALRKL--NTNGTALQIAEFAASAEFLG 404
Query: 394 IEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ ++L + + I ++ R + K+F AD IR LE G
Sbjct: 405 LVFDWDNLGLRAGLGVTFVGDHPDTDMIANILLVRQEHKQRKQFEEADRIRALLEKAGVQ 464
Query: 442 LEDYKNPDNGQRMT 455
+ D + +T
Sbjct: 465 VNDNAGGLSSFEIT 478
>gi|229003104|ref|ZP_04160954.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758150|gb|EEM07345.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock1-4]
Length = 440
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 164/464 (35%), Positives = 238/464 (51%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I I+ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ + T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYYKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGKGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTSTSKG-------IIDPAVLSA--------------LYNDLNTVSAIQ 366
L + + + + +D NT +A+
Sbjct: 285 QNTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ LA + + + F ILG+E+ KE L + IE L+Q+
Sbjct: 345 ELYNLANHANQYLLEEHTSKAVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439
>gi|217968073|ref|YP_002353579.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|226735054|sp|B8E391|SYC_DICTD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|217337172|gb|ACK42965.1| cysteinyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 465
Score = 348 bits (892), Expect = 1e-93, Method: Composition-based stats.
Identities = 162/476 (34%), Positives = 240/476 (50%), Gaps = 38/476 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YNTL R+ +F+ ++P + MY CGPTVY++AHIGN R I D+L R+L Y
Sbjct: 1 MELYLYNTLTRRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVLLYNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI A++E I T+ F +D
Sbjct: 61 --IVKHVMNITDVGHLTSDADEGEDKIEREAKKE------RRTAWEIAEFYTEAFKRDIK 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L L P +AT+HI I LI + G+ Y+ ++ I FDTS +P+YG + + ++
Sbjct: 113 KLNILEPDIWCKATDHIKDFIDLILILEKKGYTYKTSDGIYFDTSKVPDYGKLAGQDLEN 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
G RV KKNP DF LWK + + W+SPWG G PGWHIECSAMS+ YLG+
Sbjct: 173 LLPGARVEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGIGFPGWHIECSAMSTKYLGQ 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG+D I HH NEIAQS A + A W+H FL + ++M KS GNFIT++
Sbjct: 233 PFDIHCGGIDHIPIHHTNEIAQSEAAYD-KPMAKYWLHGEFLVMGEKRMGKSEGNFITLS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------- 342
+L E + + R L HYR P+ FT L A+ L + +
Sbjct: 292 DLEE------KGYHPLSYRYFCLTAHYRSPLRFTWTALESAQRALFRLYENMKRYPQENA 345
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKEH 400
+ A+ +DL+ A+ +L ++ ++ +LG+ +
Sbjct: 346 SYDKKYEEEFHKAINDDLDMPKALAITWELVKDDQVPPEVKRATLLQFDKVLGLSLNNPP 405
Query: 401 LNKNISIAIE-KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
K KLV+ER + K K + AD IR+++ +KG+I+ED ++ T
Sbjct: 406 EIKIEIPEEIWKLVEERELARKNKDWEKADKIREEIRNKGYIIEDTPQGPRVKKAT 461
>gi|330814242|ref|YP_004358481.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487337|gb|AEA81742.1| cysteinyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
Length = 430
Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats.
Identities = 201/445 (45%), Positives = 268/445 (60%), Gaps = 28/445 (6%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+N+R+YVCGPTVYD+ H+GNARP+IVFD+L+RLL +G++ V YVRNITD+DDKI+E A
Sbjct: 4 NNVRVYVCGPTVYDYPHVGNARPLIVFDLLFRLLNKIFGKEKVQYVRNITDVDDKILESA 63
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ N +I +T + + F D + L CL PT +P+AT+HI +MI L +I
Sbjct: 64 K------SKNISIQDLTKEVIKDFQDDCSYLNCLTPTKEPKATDHIQEMIELTTKLIEKK 117
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
AY + F+ S +YGS S +KIDE G+RV KK+P DF+LWK S EPG
Sbjct: 118 FAYIEKGHVYFEVSKYKDYGSLSNKKIDELISGSRVEISKSKKSPVDFVLWKPSLEDEPG 177
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W+SPWG+GRPGWH+ECSAMS YLGK FDIHGGGLDLIFPHHENEIAQS CA+ A
Sbjct: 178 WDSPWGKGRPGWHLECSAMSEKYLGKEFDIHGGGLDLIFPHHENEIAQSTCANETNLLAK 237
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNG++ + KMSKS+GNFITINEL + VIRLAML THY +P D+
Sbjct: 238 FWMHNGYVTVNKEKMSKSDGNFITINEL-------KGKFDGQVIRLAMLSTHYTQPFDWN 290
Query: 324 VQRLTEAEILLSKWPQTSTSKGI-IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
Q L + L+KW + + IDP++L +L +DLNT I LHKL +E+ +
Sbjct: 291 NQILENSYKSLNKWYDFYSDENETIDPSLLDSLKDDLNTPLFISQLHKLHQEAMDGNTKS 350
Query: 383 -PIFNASAHILGIEV-------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
+ + +G+ ++ + L+QER + K F +D IR
Sbjct: 351 GKKLSTACKFIGLFNVNAEGWKDQKSKKSLSEDEVNILIQERNLARDNKDFKRSDEIRDL 410
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
L KG ++ED +N T WK
Sbjct: 411 LNDKGILIEDKENS------TTWKY 429
>gi|332300111|ref|YP_004442032.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
gi|332177174|gb|AEE12864.1| cysteinyl-tRNA synthetase [Porphyromonas asaccharolytica DSM 20707]
Length = 492
Score = 347 bits (891), Expect = 2e-93, Method: Composition-based stats.
Identities = 160/499 (32%), Positives = 237/499 (47%), Gaps = 57/499 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ IYNTLER F+ I P ++ +YVCGPTVY H+G+AR I FD+L+R L++
Sbjct: 1 MSQLYIYNTLERAKVPFEPIAPPHVGLYVCGPTVYGDPHLGHARSAITFDILFRYLKHLG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRN+TD+ +DKI ++A+ E + ++
Sbjct: 61 Y--KVRYVRNVTDVGHLEHDADDGEDKIAKKAKLEQLE------PMEVAYYYLTRYHDSL 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRR 168
L L P+ +P A+ HI + I L+Q I+ G+AY + + FD + YG S R
Sbjct: 113 RLLNVLPPSIEPLASGHIIEQIALVQQILDAGYAYVSQGSVYFDVLKYHADHPYGILSGR 172
Query: 169 KIDEQKMGTRVPEKYHK-KNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+++ TR + + NP DF LWK++ P W SPW G PGWH EC+AM Y
Sbjct: 173 NVEDMISNTRELDGQDEKHNPLDFALWKKAQPNHIMRWPSPWSEGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGGLDL FPHHE EIAQ+ + E W+HN + ++G+KM+KS GNFI
Sbjct: 233 LGAHFDIHGGGLDLTFPHHECEIAQAVASQG-EPMVKYWMHNNMITVDGKKMAKSAGNFI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
T+ E +++ IR +L HYR +DF+ L AE +
Sbjct: 292 TLEEFFTGDHPALEQAYAPMTIRFFVLSAHYRGTVDFSNSALQAAEKGYQRLMDADAKLQ 351
Query: 346 IIDP-------------AVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPI 384
+ P A+ +D+NT I AL AR HD L
Sbjct: 352 SLKPSATSTIEKIDLAERCKEAMDDDINTPMVIAALFDAARLINSIHDGHEQITSEQLEE 411
Query: 385 FN-----ASAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRK 433
ILG++ E + + + A++ L++ R K + ++D IR
Sbjct: 412 LRRAYDLYLHDILGMQSATETADLSGSQQEAFAGAMDLLLEIRAKAKASKDWETSDLIRD 471
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + GF ++D K+ +
Sbjct: 472 KLTALGFEIQDTKSGAEWK 490
>gi|225430454|ref|XP_002285478.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 491
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 176/499 (35%), Positives = 252/499 (50%), Gaps = 73/499 (14%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R+ F+ + MYVCG T YD +HIG+AR + FDVLYR LR+ E V YVR
Sbjct: 1 MSRQKEVFKPKVDGRVGMYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHL--EYEVNYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII RA + + + ++ + Q+F D T L CL P+ +P ++H+P
Sbjct: 59 NFTDVDDKIIARANE------MGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMP 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
Q+I +I+ II + AY ++ F P YG S RK+++ + G RV KKNPAD
Sbjct: 113 QIIDMIKQIIDNDCAYRVEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPAD 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK + EP W+SPWG GRPGWHIECSAMS+ YLG FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKKGEPFWDSPWGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QSC A + + + WIHNGF+ ++ KMSKS GNF TI ++++ + +RL
Sbjct: 233 QSCAACK-QSNISYWIHNGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLF 284
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------------------SKGII 347
++ THYR PI+++ +L A + QT
Sbjct: 285 LIGTHYRSPINYSDVQLESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKF 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLPIFNASAHI 391
L+++ +DL+T + AL + L + I
Sbjct: 345 YNDFLTSMSDDLHTPVVLAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTI 404
Query: 392 LG---------IEVCKEHL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
LG + +E +K I + ++ER + K K++ +D IRK L + G
Sbjct: 405 LGLMPASYSEALLQLREKALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVG 464
Query: 440 FILEDYKNPDNGQRMTRWK 458
L D + T W+
Sbjct: 465 IALMDSPD------GTTWR 477
>gi|119897351|ref|YP_932564.1| cysteinyl-tRNA synthetase [Azoarcus sp. BH72]
gi|119669764|emb|CAL93677.1| CysS protein [Azoarcus sp. BH72]
Length = 460
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 181/495 (36%), Positives = 248/495 (50%), Gaps = 75/495 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I+NTL R F+ I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR +
Sbjct: 1 MLSIHNTLSRSKEVFRPIEPGKVRMYVCGMTVYDYCHLGHARVMVVFDMVARWLRASGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA++ ++I +T + +D L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIRRAQENG------ESIRALTDRFIAAMHEDADALGVLRPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+++ M LI+ + G AY A N + + YG S + +DE + G RV
Sbjct: 113 RATDYVASMQSLIERLHAKGLAYVAANHDVCYAVRKFEGYGKLSGKSLDELRAGERVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMSS LG+ FDIHGGG D
Sbjct: 173 GEKKDPLDFVLWKHAKAEEPDEAKWASPWGSGRPGWHIECSAMSSDLLGEHFDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI ++LET
Sbjct: 233 LQFPHHENEIAQSEGAHG-HAFVNYWMHNGFVRVDDEKMSKSLGNFFTIRDVLET----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------- 349
+ A V+R +L HYR P++++ L +A L++ S
Sbjct: 287 --YDAEVVRFFILRAHYRSPLNYSDAHLDDARQALTRLYTALRSVEAAPAAVDWTESHAL 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKE--HLNKNI 405
+A+ +D NT A+ L +LA E + D L A +LG+ L +
Sbjct: 345 RFRAAMDDDFNTAEALAVLFELANEVNRGRDPLLAAQLKALGAVLGLLERDPVAFLQGST 404
Query: 406 SIA---------------------IEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
A + +R+ +L + G +LED
Sbjct: 405 PAASGLGPEDIEARIAARAAAKKAKDFAEADRIRA--------------ELLAAGIVLED 450
Query: 445 YKNPDNGQRMTRWKQ 459
G T W++
Sbjct: 451 ------GAGGTTWRR 459
>gi|317507827|ref|ZP_07965528.1| tRNA synthetase class I catalytic domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
gi|316253869|gb|EFV13238.1| tRNA synthetase class I catalytic domain-containing protein
[Segniliparus rugosus ATCC BAA-974]
Length = 477
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 150/475 (31%), Positives = 231/475 (48%), Gaps = 45/475 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + EF + + +Y+CG TV H+G+ R +VFDVL R L+
Sbjct: 1 MTLRLYDTRTRVVREFHPLREGQVSIYLCGATVQGRPHVGHLRSAVVFDVLRRWLQAKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V + RN+TDIDDKI+ +A + + + + F RL L P+ +
Sbjct: 61 D--VLFARNVTDIDDKILVKAAEAG------RPWWEWAATHERAFASAYDRLGVLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QM+ I+ +I GHAY ++ FD S+P YG S ++D+ G
Sbjct: 113 PRATGHITQMVDCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQLDDVHQGESA--A 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+EC+AM++ YLG FDIH GG+DL+F
Sbjct: 171 EGKRDPRDFTLWKGAKPGEPWWPTPWGPGRPGWHLECTAMATTYLGSEFDIHCGGMDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+ A + A W+HNG+L+L G KMSKS GN +++ ELL +
Sbjct: 231 PHHENELAQARGAG--DSFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
+R + HYR +F+ + + EA + + + G + S
Sbjct: 283 -PQELRYYLGCAHYRSTQEFSFEAVIEAAVAYKRLESFVLRAADEYGEIALGEVTGDFAS 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLP--------IFNASAHILGIEVCKEHLNK-- 403
AL +DL A+ L + A++ A +LG +
Sbjct: 342 ALDDDLAVPKALAELQRHAKQGNTELAERKPGAAATAASVRAMLAVLGCDPFDPIWASGR 401
Query: 404 -------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + +E + R K +++AD +R +L G + D +
Sbjct: 402 EEKAALVALDVLVEAELSRREAARADKDWATADEVRDRLRKAGIDVTDGPDGPKW 456
>gi|15603963|ref|NP_220478.1| cysteinyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
gi|6226168|sp|Q9ZE62|SYC_RICPR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|3860654|emb|CAA14555.1| CYSTEINYL-TRNA SYNTHETASE (cysS) [Rickettsia prowazekii]
gi|292571677|gb|ADE29592.1| Cysteinyl-tRNA synthetase [Rickettsia prowazekii Rp22]
Length = 457
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 197/474 (41%), Positives = 275/474 (58%), Gaps = 33/474 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+ +YNTL R F DP+NI+MYVCGPTVYD HIGN+R ++V+D+LYR++ +G
Sbjct: 1 MKLHLYNTLTRTKEVFNPQDPANIKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+K V YVRNITD+DDKII+RA + I+ +T K T++F + L C+ PT +
Sbjct: 61 KKAVKYVRNITDVDDKIIDRAE------LLGITINDLTDKVTREFHINMEYLGCMLPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++ G R+
Sbjct: 115 PKATEHIDVMIEIIERLIAKDHAYIADNHVYFDVLSAPNYTELSNRNLEAMFEGVRIENS 174
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KKNP DF+LWK + EP + SPWG GRPGWHIECSAMS YLG+ FDIHGGG D
Sbjct: 175 KTKKNPQDFVLWKPAKKNEPENINFTSPWGLGRPGWHIECSAMSYKYLGQNFDIHGGGAD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHH NEIAQS CA A WIHNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 LIFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGSKMSKSLGNFITVRDLMD------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLSAL 355
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +L
Sbjct: 289 KQIQGEVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIEHINVQKVDLPSNFMRSL 348
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGI--EVCKEHLNKNISI 407
++D+NT AI+ ++ A+ + A+ +G+ + E N+++
Sbjct: 349 FDDMNTPLAIKIINDYAKCVFISKTEAERKFNASAIITCANFIGLMRKTQYEWFNRDVDE 408
Query: 408 A-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I +L+ +RL K K + AD IR QL K ILED N +T W+++
Sbjct: 409 FYINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSN-----YITIWRKE 457
>gi|311107717|ref|YP_003980570.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
gi|310762406|gb|ADP17855.1| cysteinyl-tRNA synthetase 2 [Achromobacter xylosoxidans A8]
Length = 484
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 172/497 (34%), Positives = 239/497 (48%), Gaps = 55/497 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R F+ +RMYVCG TVYDF H+G+AR ++ FDV+ R LR
Sbjct: 1 MLQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L P +P
Sbjct: 59 LAVDYVRNITDIDDKIIRRAVETG------RRIGEVTEFYIDAMHADERALGVETPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ M+ +I + +G AY+ + ++ F YG S + +D+ + G RV
Sbjct: 113 RATEYVGDMLDIIGKLEQNGLAYQADDGDVNFAVRGFAGYGKLSGKTLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SAKRDPLDFVLWKSAKAEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A ANIW+H G L ++ KMSKS GNF TI + + ++
Sbjct: 233 LKFPHHENEIAQTEGAFG-GTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQEEPAA 291
Query: 300 RSW-------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
A ++R ++ HYR P ++T L +A+ L + Q
Sbjct: 292 DQAVYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLIDAQNALDRLYQALQNVPADAQGID 351
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEH 400
A +A+ +D N+ AI AL +LA E+ + A A +LG+
Sbjct: 352 WNEPQAQAFKAAMDDDFNSSGAIAALFELASEANRGKSARSAGQLKALASLLGLLQQDPA 411
Query: 401 L------------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ AI+ L+ R + F+ AD IR +L G L
Sbjct: 412 AYFQSPTRYSAAAIEQGERRALDAEAIQSLIDARAAAKAARNFAEADRIRAELREAGIEL 471
Query: 443 EDYKNPDNGQRMTRWKQ 459
+D T+W++
Sbjct: 472 DDKPGGL-----TQWRR 483
>gi|206900189|ref|YP_002251400.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
gi|226735053|sp|B5YAD0|SYC_DICT6 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|206739292|gb|ACI18350.1| cysteinyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
Length = 465
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 160/476 (33%), Positives = 240/476 (50%), Gaps = 38/476 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL ++ +F+ ++P + MY CGPTVY++AHIGN R I D+L R+L Y
Sbjct: 1 MDLYLYNTLTKRKEKFEPLNPPYVGMYTCGPTVYNYAHIGNLRTYIFEDILKRVLIYNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI A++E + I T+ F +D
Sbjct: 61 --IVKHVMNITDVGHLTSDADEGEDKIEREAKKE------RRSAWEIAEFYTEAFKRDLK 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L L P +AT+HI I LI + G+ Y ++ I FDTS +P+YG + + ++
Sbjct: 113 KLNILEPDIWCKATDHIQDFIDLILILERKGYTYRTSDGIYFDTSKVPDYGKLAGQDLEN 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
G RV KKNP DF LWK + + W+SPWG G PGWHIECSAMS+ YLG+
Sbjct: 173 LLPGARVEYNPEKKNPTDFALWKFSPKDVKRQMEWDSPWGVGFPGWHIECSAMSTKYLGQ 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG+D I HH NEIAQS A + A W+H FL + ++M KS GNFIT++
Sbjct: 233 PFDIHCGGIDHIPIHHTNEIAQSEAAYD-KPMAKYWLHGEFLIMGEKRMGKSEGNFITLS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------- 341
+L E + + R L HYR P+ FT L A+ L + +
Sbjct: 292 DLEE------KGYHPLSYRYFCLTAHYRSPLKFTWSALEAAQRALFRLYENMKKYPKEEA 345
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAHILGIEVCKEH 400
+ A+ +DL+ A+ +L ++ ++ +LG+ +
Sbjct: 346 KYDEKYEEEFHKAINDDLDMPKALAITWELVKDDKLAPEVKRATLLQFDKVLGLSLDNPP 405
Query: 401 LNKNISIAIE-KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
K KLV+ER + K K + AD IR++++++G+I+ED ++ T
Sbjct: 406 EIKIEIPEEIWKLVEERELARKNKDWEKADRIREEIKNRGYIIEDTPQGPRIKKAT 461
>gi|228473829|ref|ZP_04058571.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
gi|228274670|gb|EEK13504.1| cysteine--tRNA ligase [Capnocytophaga gingivalis ATCC 33624]
Length = 494
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 161/493 (32%), Positives = 227/493 (46%), Gaps = 46/493 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++KI+N+L + F + +N+ MYVCGPTVY H+GN R + FD +YR LR+
Sbjct: 1 MNHQLKIFNSLTGEKEIFVPLHANNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALRFL 60
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 61 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELSRRNIEE 178
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K+NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGDQ 238
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ W+H L + G++MSKS GN+I +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHGQSP-VRYWMHANMLTMNGQRMSKSTGNYILPMQ 297
Query: 291 LLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
L+ F + + VIR + HYR +D + + + AE ++ +
Sbjct: 298 LISGDNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFNRLMEAVKILNELTS 357
Query: 347 --------------IDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHD 380
AL +D N I L + + + +
Sbjct: 358 EIEHPGPLSSEIEQWKQKCYDALLDDFNAPILIAHLFEAVKWIFQVKSGEEKISIQELEE 417
Query: 381 LLPIFNAS-AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
L + NA +LG+ E N + ++ L+ R+ K F+ +D IR +L +
Sbjct: 418 LRSLVNAFVFDVLGLKNEELNAANNDRLDGVLQLLINMRMEARANKDFALSDKIRDELLA 477
Query: 438 KGFILEDYKNPDN 450
G L+D K +
Sbjct: 478 LGIQLKDGKEGTS 490
>gi|308808270|ref|XP_003081445.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
gi|116059908|emb|CAL55967.1| D84717 probable cysteinyl-tRNA synthetase (ISS) [Ostreococcus
tauri]
Length = 661
Score = 347 bits (890), Expect = 2e-93, Method: Composition-based stats.
Identities = 181/505 (35%), Positives = 245/505 (48%), Gaps = 78/505 (15%)
Query: 4 KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+ + NT+ RK F DP ++MYVCG TVYD++HIG+AR + FDVLYR L
Sbjct: 159 KLWLTNTMTRKKELFIPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRRLMGLG 218
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTY RN TDIDDKII+R+ + + +T+K F +D T L CL PT
Sbjct: 219 YD--VTYCRNFTDIDDKIIKRSNESG------ETCEALTNKFIDAFHEDMTALGCLRPTL 270
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT + +I I+ +I G+AYEA+ ++ F ++P YG+ S RK D+ + G RV
Sbjct: 271 EPRATECVDDIIAFIERLIAKGNAYEASGDVYFSVDTLPAYGALSGRKQDDNRAGERVAV 330
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNPADF LWK + P EP W SPWG GRPGWHIECSAM LG DIHGGG DL+
Sbjct: 331 DERKKNPADFALWKTAKPGEPTWTSPWGDGRPGWHIECSAMIEKMLGPTIDIHGGGQDLV 390
Query: 242 FPHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
FPHHENE+AQS A W+HNGF+ ++ KMSKS GNF TI E+L+
Sbjct: 391 FPHHENELAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD-- 448
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
+ V+R +L HYR PI++T + L EA + QT
Sbjct: 449 -----KYHPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTLQDVRSVIRDAAVEE 503
Query: 344 ---------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
+ VL +L +DLNT + + L + A
Sbjct: 504 DATKPVPMVADALKLANETEKQVLESLNDDLNTPAVMATLSAPLKSMNDFMTTKAGKKAV 563
Query: 389 AHI---------------------------LG-IEVCKEHLNKNISIAIEKLVQERLILL 420
+ LG + H A+ ++ER
Sbjct: 564 GRVRALQALLTSIEGVLEAVGMPRGEEDVFLGELRAKALHRAGLTEDALLAKIEERKKAR 623
Query: 421 KMKKFSSADYIRKQLESKGFILEDY 445
K F+ +D +R +L ++G L D
Sbjct: 624 DAKDFAESDRLRDELSARGIGLMDG 648
>gi|330718101|ref|ZP_08312701.1| cysteinyl-tRNA synthetase [Leuconostoc fallax KCTC 3537]
Length = 469
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 164/485 (33%), Positives = 240/485 (49%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL + F++I P+ I MYVCGPT+Y++ HIGNAR I FD + R + E
Sbjct: 1 MIHVYNTLTHQKEIFKSIQPNLITMYVCGPTIYNYIHIGNARSAIAFDTIRRYFEFRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII RA +E S + IT K Q F DT L T +
Sbjct: 61 --VNYVSNFTDVDDKIINRAHEEGVSE------ATITEKYAQAFENDTLPLNIKPATVRS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT IP +I + +I G+AYEA+ ++ F YG + + ++E + G
Sbjct: 113 KATEVIPDIISFVSELIAKGYAYEADGDVYFRARQFKGYGILAHQDLNELEAGASGRLDP 172
Query: 184 HKKNPA----DFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ DF +WK P W+SPWG GRPGWHIECS M+ YLG D+HGGG+
Sbjct: 173 EELAKKEDALDFAVWKSENRPGVISWDSPWGNGRPGWHIECSVMAQKYLGNTIDVHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS + + W+HNGF+N+ KMSKS GNFIT++++LE
Sbjct: 233 DLAFPHHTNEIAQSEARTG-QTFVHYWLHNGFVNINDEKMSKSLGNFITLHDMLERYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
IR + T YR PI+++ LT+A + L + +
Sbjct: 290 ----DPMTIRYLLSTTQYRRPINYSEDTLTQARVELDRIRTAYRNLHFRMKDSKDGRNEA 345
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
++A+ +D NT +A+ A+ +L + + LL A
Sbjct: 346 VESDINEYKKQFIAAMDDDFNTQNALAAIFELIALANTYSEAAIIQRDTAMLLLETMTAL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ GIE + +++ + L+++R+I + K FS +D IR L+ + I+ED
Sbjct: 406 MQVFGIETLMPV--EQLTVEQQSLLEQRVIARQNKDFSESDRIRDILKLQDIIVEDTAQG 463
Query: 449 DNGQR 453
+
Sbjct: 464 QRWHK 468
>gi|54022402|ref|YP_116644.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|61216444|sp|Q5Z2R1|SYC_NOCFA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|54013910|dbj|BAD55280.1| putative cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
Length = 467
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 150/480 (31%), Positives = 229/480 (47%), Gaps = 46/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T R + EF + P +Y+CG TV HIG+ R + FDVL R L+ +
Sbjct: 1 MTLRLFDTESRTMREFAPLVPGRASVYLCGATVQGEPHIGHVRSGVAFDVLRRWLQAHDY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V ++RN+TDIDDKI+ +A + + + F + L P+ +
Sbjct: 61 D--VWFIRNVTDIDDKILNKAAEAG------RPWWEWAATYERAFDRAYRLLGVQPPSAE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QM+ L++ +I GHAY + + FD S P YG+ S K+D+ G
Sbjct: 113 PRATGHITQMVELMRRLIERGHAYASAGNVYFDVQSYPEYGALSGHKLDDVHQGESA--G 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W SPWG GRPGWH+ECSAM+ YLG FDIH GG+DL+F
Sbjct: 171 EGKRDPRDFTLWKAAKPGEPSWPSPWGPGRPGWHLECSAMAEFYLGAEFDIHCGGMDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A A W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 231 PHHENEIAQSKAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSVPNMLTKVRAVE--- 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLS 353
+R + HYR ++++ + L +A + G A
Sbjct: 286 ----LRFYLGSAHYRSMLEYSDKALDDAVAGYQRIEAFLHRTAERVGEIPVGKWTDAFAE 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEHLN-- 402
A+ +DL A+ + +L E K + + A ILG+ +
Sbjct: 342 AMDDDLAVPRALAEVFRLVTEGNKALEAGAVDTARELGGQVRAMLGILGVCPFDPQWDHK 401
Query: 403 -------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ + + + R K +++AD +R +L + G + D N T
Sbjct: 402 QDDSVAQTALDVLVRAELDRRQQARADKDWATADAVRDRLHAAGIDVTDTPNGPEWSLRT 461
>gi|116328522|ref|YP_798242.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116331250|ref|YP_800968.1| cysteinyl-tRNA synthetase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
gi|122281004|sp|Q04SB0|SYC_LEPBJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|122283690|sp|Q050D6|SYC_LEPBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116121266|gb|ABJ79309.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
Hardjo-bovis L550]
gi|116124939|gb|ABJ76210.1| Cysteine--tRNA ligase [Leptospira borgpetersenii serovar
Hardjo-bovis JB197]
Length = 474
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 162/492 (32%), Positives = 230/492 (46%), Gaps = 55/492 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I+ YN+L K +F +P + +Y CGPTVY+FAHIGN R + DVL R L+
Sbjct: 3 EIQFYNSLSGKKEKFSPANPHRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V NITDIDDKII SI +I T+ T+ F +D ++ H P
Sbjct: 63 --VDMTMNITDIDDKIIR------DSIASQKSIQEFTTPWTEAFFEDLKTVSAEFLEHYP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT IP+MI +IQ + G YE + + F YG S+ K GTR
Sbjct: 115 KATESIPEMIQIIQRLQNQGLVYEKDENLYFSIQKFEGYGKLSKIDTSGMKTGTRYDTDE 174
Query: 184 HKKNP-ADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K DF+LWK E W++ G GRPGWH+ECSAM G DIH GG+DL+
Sbjct: 175 YDKEDVRDFVLWKSPKRKGEASWKTSVGTGRPGWHLECSAMIRKIYGSGVDIHTGGVDLL 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A E W+H+ L +EG+KMSKS GNF T+ +L+ G+
Sbjct: 235 FPHHENEIAQSEGAFPEESFVRTWLHSEHLLVEGQKMSKSKGNFYTLRDLV------GQG 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
IR ++ HYR ++F+ R+ EA + K I
Sbjct: 289 LDPKAIRFLLISAHYRSKLNFSTDRIAEASANIRKIQNCLDRLLDIAQNVKIDPSYSFND 348
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFNAS 388
+L +DLN A+ + + + ++ + I
Sbjct: 349 ELTLRWKKEFEESLADDLNVSKALAVVFESLKTINAFLDSKKNRVAEISANEFIQILAYY 408
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
I G+ + + I I+ L+QER K K F+ +D IR QL ++G ++ED K+
Sbjct: 409 DRIFGVLNFESQKDPLIDSEIDSLIQERQTARKNKDFARSDAIRDQLLAQGILIEDTKDG 468
Query: 449 DNGQRMTRWKQK 460
RW++K
Sbjct: 469 I------RWRRK 474
>gi|154498448|ref|ZP_02036826.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
29799]
gi|150272516|gb|EDM99701.1| hypothetical protein BACCAP_02437 [Bacteroides capillosus ATCC
29799]
Length = 469
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 162/483 (33%), Positives = 232/483 (48%), Gaps = 49/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L EF P + MY CGPTVY FAHIGN R I+ DVL + LRY +
Sbjct: 1 MKLYNSLSHTKEEFVPHVPGKVSMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRYDGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
VT V NITD+ +DK+++ A++EH ++ I T F D +L
Sbjct: 60 -VTRVMNITDVGHLASDADTGEDKMVKGAQREHKTV------MEIAKFYTDAFFSDCKKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT I I +I +++ G+AY A I FDTS + Y F+ ++
Sbjct: 113 NIKYPDVVQPATGMIDDYIKVITSLLEKGYAYHAGGNIYFDTSKLKQYYVFNDHDEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E W+SPWG G PGWHIECS +S YLG+
Sbjct: 173 VGVRDSVEEDQNKRNKADFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D FPHH NEIAQS W+H LN KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HPWCKYWMHVHHLNTSNGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
L E + + V RL L +HYR+ + F+ + L A+ K + G
Sbjct: 292 LLEE------KGYDPLVYRLFCLQSHYRKGLVFSWENLDNAKAAYDKLVARVAALGEDGD 345
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC- 397
A + A+ NDLNT + A++ + T + + +LG+++
Sbjct: 346 VDQAAVDAARAAFIEAVGNDLNTSLGVTAVYDALKADTNDATKRAVIADFDKVLGLDLLG 405
Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
KE + IE L+ +R K K ++ AD IR QL++ G ++D N
Sbjct: 406 RAAALKEKESAPVEGAEEIEALIAQRAQAKKEKNWAQADAIRDQLKAMGVEIKDTPNGVE 465
Query: 451 GQR 453
+R
Sbjct: 466 WKR 468
>gi|116622355|ref|YP_824511.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
Ellin6076]
gi|122254163|sp|Q021Y7|SYC_SOLUE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116225517|gb|ABJ84226.1| cysteinyl-tRNA synthetase [Candidatus Solibacter usitatus
Ellin6076]
Length = 466
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 160/487 (32%), Positives = 228/487 (46%), Gaps = 50/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ YNTL +++ EF + +RMY CGPTVYDFAHIGN R D+L ++LR
Sbjct: 1 MALRFYNTLSQQVEEFTPASDNTVRMYTCGPTVYDFAHIGNFRTFTFVDLLRKVLRANGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +V NITD+DDKII A +H S+ T T+ F++D L P
Sbjct: 61 QL--NHVMNITDVDDKIIRNAVAQHQSLE------QYTKIYTEAFLEDCKMLRLERPERI 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT HI M+ I+ + H Y ++ + F +S P YG S G RV
Sbjct: 113 APATEHIHDMVSAIERLGDSQHTYASDGSVYFKIASFPGYGKLSHNDFSGNLAGARVDVD 172
Query: 183 YHKK-NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++K + DF LWK EP W++ G GRPGWHIECS M+ YLG+ DIH GG+DL+
Sbjct: 173 EYEKADARDFALWKTPKEGEPFWDTTIGPGRPGWHIECSVMAIKYLGETLDIHAGGIDLV 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS + + W+H FL +EG+KMSKS GN+ T+ +L+ +
Sbjct: 233 FPHHENEIAQSESLTG-KLFSRFWLHAEFLMVEGQKMSKSLGNYYTLRDLVA------KG 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ IR + YR+ ++FT+ L A I + +
Sbjct: 286 YEPESIRYLLASVPYRKSLNFTLDGLKAARIAIERLRNFKRRLETEPFAEGLSAILAERT 345
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILG 393
A + L DLNT A+ ++ + R+ D L I
Sbjct: 346 AQASQAFIGGLNEDLNTAEALASVFEYVRDLNSAMDSGEFRAGNTTAALEFLARFDSIFD 405
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + I+ + R K + F+ AD IR QL ++G ILED K+
Sbjct: 406 VLKPTAKAGELSDAEIDAQIAARAAAKKSRDFALADQIRDQLLAQGIILEDTKS------ 459
Query: 454 MTRWKQK 460
RWK+K
Sbjct: 460 GVRWKRK 466
>gi|45657880|ref|YP_001966.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
gi|59798557|sp|Q72QT1|SYC_LEPIC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|45601121|gb|AAS70603.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar
Copenhageni str. Fiocruz L1-130]
Length = 471
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 163/490 (33%), Positives = 236/490 (48%), Gaps = 54/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I+ YN+L + +F DP+ + +Y CGPTVY+FAHIGN R + DVL R L+
Sbjct: 3 EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V NITDIDDKII SI +I T+ T+ F +D ++ H P
Sbjct: 63 --VDMTMNITDIDDKIIR------DSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT+ IP+M+ +IQ + G YE + + F NYG S+ K GTR
Sbjct: 115 KATDSIPEMVDIIQKLQKKGLVYEKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTDE 174
Query: 184 HKKNP-ADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++K DF+LWK E W + G GRPGWH+ECSAM G DIH GG+DL+
Sbjct: 175 YEKEDVRDFVLWKSPKLEGETSWYTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDLL 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A E W+H+ L ++G+KMSKS GNF T+ +L++ +
Sbjct: 235 FPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------QG 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
IR ++ THYR ++F+ R+ EA + K ++P
Sbjct: 289 LDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFSI 348
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
+L +DLN A+ + + ++ D + I
Sbjct: 349 PFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ E + I+ L++ER I K K F+ +D IR QL ++G ++ED K
Sbjct: 409 ILGVLNF-ESKKDLLDSEIDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTKEGI- 466
Query: 451 GQRMTRWKQK 460
RW++K
Sbjct: 467 -----RWRKK 471
>gi|297610616|ref|NP_001064785.2| Os10g0463100 [Oryza sativa Japonica Group]
gi|22758318|gb|AAN05522.1| putative cysteinyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|255679472|dbj|BAF26699.2| Os10g0463100 [Oryza sativa Japonica Group]
Length = 520
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 180/512 (35%), Positives = 265/512 (51%), Gaps = 79/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + F+ + MYVCG T YD++H+G+AR + FDVL+R L+Y E
Sbjct: 21 ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN TDIDDKII+RA + + ++S+ +F +D L CL PTH+P
Sbjct: 81 --VNYVRNFTDIDDKIIKRANEAG------EDALSLSSRFIDEFHRDMYELQCLPPTHEP 132
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T HI Q+I LI I+ +G AY ++ F + P+Y S S RK+D+ + GTRV
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS A E W+HNGF+N +G+KM+K++ NF TI +++ +
Sbjct: 253 HHENELAQSQAAY-PESEVKCWMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YH 304
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------- 343
+RL ++ THYR ++ + L A L QT
Sbjct: 305 PMALRLFLMRTHYRSDVNHSDTALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPAD 364
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLP 383
L + +DL+T +A+ L KL ++ K D +
Sbjct: 365 DQKLIEENRSNFLEKMSDDLHTTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQ 424
Query: 384 IFNAS-------AHILGI----EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFS 426
A ILG+ + ++ +K + + +++++++R + K K F+
Sbjct: 425 ALVALQNEVTDKLSILGLMPMSSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFA 484
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+D IR +L + G L T W+
Sbjct: 485 ESDRIRTELSALGIALM------GEPTGTLWR 510
>gi|259419145|ref|ZP_05743062.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
gi|259345367|gb|EEW57221.1| cysteinyl-tRNA synthetase [Silicibacter sp. TrichCH4B]
Length = 457
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 202/457 (44%), Positives = 266/457 (58%), Gaps = 20/457 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++N+ RK F I+P N++MYVCGPTVYD AH+GNARP++VFDVL+RLLR+ YG +
Sbjct: 4 IKLHNSKTRKKEVFIPINPDNVQMYVCGPTVYDRAHLGNARPVVVFDVLFRLLRHVYGAE 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RN TD+DDKI RA + IS ITS+ TQ F+ D L L PTH PR
Sbjct: 64 HVTYARNFTDVDDKINARAAESGRE------ISEITSETTQWFLDDMGALGALEPTHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQM+ +I+++I GHAY A ++F S YG S R +D+ G RV
Sbjct: 118 ATQYIPQMVAMIEDLIARGHAYAAEGHVLFAVDSWREGYGQLSGRSVDDMIAGARVEVAP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKNP DF+LWK S +PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+FP
Sbjct: 178 YKKNPMDFVLWKPSDAAQPGWDSPWGRGRPGWHIECSAMSLDLLGESFDIHGGGNDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA+ + A W+HN L +EG+KMSKS GNF T+ +LLE + P
Sbjct: 238 HHENEIAQSCCANPEGEFARYWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGIP 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---LSALYNDLN 360
V+R L T YR+P+D+T ++ EAE L KW + A L L +DLN
Sbjct: 292 GEVVRFVFLQTLYRKPMDWTEKKAAEAEATLRKWRALTAGIEPAATAAAAVLDTLADDLN 351
Query: 361 TVSAIQALHK--LARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLI 418
T AI +HK A ++ + + +G + ++S +L R
Sbjct: 352 TAGAIAEMHKLAAAGDAAGLLAAGQLVGLLSDEMG--DWAAAPSVDLSAHEARLFAARQT 409
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
++ K F+ D ++ G + K T
Sbjct: 410 AMETKDFAEVDRLKSAYTEAGLEVRMSKTGVELVPGT 446
>gi|227432961|ref|ZP_03914903.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
gi|227351307|gb|EEJ41591.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
cremoris ATCC 19254]
Length = 468
Score = 347 bits (889), Expect = 3e-93, Method: Composition-based stats.
Identities = 158/485 (32%), Positives = 229/485 (47%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I I+MYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIYVYNTLSREKEVFKPITAGKIKMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII RA++E S + +K F +DT L T +
Sbjct: 61 --VNYVSNFTDVDDKIINRAQEEGISEL------EVANKYADAFDEDTLPLNIKPATVRS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP++I ++++I G+AYE+ ++ F YG + + + E +
Sbjct: 113 RATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLND 172
Query: 184 HKKNPADFILWKRSTPMEP-----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ + + EP W SPWG GRPGWHIECS M+ YL DIHGGG+
Sbjct: 173 EETIRKEDPIDFAVWKNEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS +K N W+HNGF+N+ KMSKS GNF T++++L T
Sbjct: 233 DLAFPHHTNEIAQSEARTG-QKFVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLATYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
VIR + T YR PI++ L +A + L + +
Sbjct: 290 ----DPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGNED 345
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
+ A A+ +D NT +A+ A+ +L + LL
Sbjct: 346 VETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTMADL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ GIE N+ ++ +L+ +R++ + F +D +R QL+ G +ED
Sbjct: 406 LSVFGIEGLD--GNEELTTKQRELLDKRVLARESHDFEESDLLRNQLKEVGIFVEDTPQG 463
Query: 449 DNGQR 453
+
Sbjct: 464 QRWHK 468
>gi|330819286|ref|YP_004348148.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327371281|gb|AEA62636.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 476
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 193/490 (39%), Positives = 255/490 (52%), Gaps = 54/490 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I++Y+TL R+ + P MYVCGPTVY+FAHIGNARP +VFDVL RLLR+
Sbjct: 1 MSDAIRLYDTLTRRKEVLRTSRPDRATMYVCGPTVYNFAHIGNARPAVVFDVLARLLRHD 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y E Y RN TD+DDKI + I IT + + +D L LAP
Sbjct: 61 YRELV--YARNFTDVDDKI------NAAAAAAALPIGAITERYIAAYHEDMQALGVLAPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T HIP+++ LI+ +I GHAY A ++F S +YG S R+ ++ G RV
Sbjct: 113 LEPRVTEHIPEIVALIETLIARGHAYVAQGHVLFHVPSYADYGQLSGRRTEDMIAGARVE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK STP PGW+SPWGRGRPGWH+EC+AM +LG DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTPELPGWDSPWGRGRPGWHVECTAMIGRHLGHTIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ CA W+HN F+ ++G+KMSKS GN + + ELL
Sbjct: 233 IFPHHENEIAQGSCAHDA-LYCRTWVHNSFVTVDGQKMSKSLGNVLLVRELLAEA----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------IID 348
P IR A+L THYR P+ + +RL +A L++W D
Sbjct: 287 --PGEAIRFALLATHYRNPLHWNARRLAQARQTLTRWYGALACVEAHDGGPAPAQAVEPD 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVC----- 397
VL+AL +DLN AI LH+L + D + SA +LG+
Sbjct: 345 ALVLAALRDDLNVPLAISRLHELVSQLAHATDPDEQREAAARLHTSAALLGLLRQHAPSA 404
Query: 398 ---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
E LV ER + + F+ AD +R+QL+ G +LED
Sbjct: 405 LAALRHQSRDPRHASLTPERAEALVAERDAARQRRDFARADALRQQLDHGGVLLEDT--- 461
Query: 449 DNGQRMTRWK 458
TRW+
Sbjct: 462 ---PHGTRWR 468
>gi|124028047|ref|YP_001013367.1| cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
gi|123978741|gb|ABM81022.1| Cysteinyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
Length = 490
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 178/500 (35%), Positives = 241/500 (48%), Gaps = 66/500 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++ NT K+ EF+ + P +RMYVCGPTVYD+ H+G+AR + FD + R LR
Sbjct: 13 PPIRVRNTFGGKLEEFKPLRPGLVRMYVCGPTVYDYTHLGHARTYVAFDAIKRYLRLRGY 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+NITDIDDKII RAR+E I + + + L
Sbjct: 73 --NVYHVQNITDIDDKIINRAREEGKD------WREIVETYAKDYFEGLRALRIK-IDMH 123
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+HI ++I I+ +I G+AY + + F+ P+YG S R E+
Sbjct: 124 PRVTSHIREIIEFIEGLIDKGYAYVAPSGSVYFEVDKYPDYGRLSGRFHPEEWRQEEDVL 183
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K KKNP DF LWK P EP WE+PWGRGRPGWHIECS M+S YLG FDIHGGG DLI
Sbjct: 184 KE-KKNPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMASRYLGDQFDIHGGGQDLI 242
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS + W+H G+L + G KMSKS GN I + E L +
Sbjct: 243 FPHHENERAQSEAYFGKKPWVRYWLHTGYLTIRGEKMSKSLGNIIPLREAL-------KK 295
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPA------- 350
W +RL +L HYR +DF+ + L +A+ L + +DP
Sbjct: 296 WSPETLRLWILSAHYRTQLDFSEESLEQAKANLRRLRGALQGLQRIIEEVDPQSRLGDSE 355
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG---- 393
A+ ND NT A+ A KL + ++LP N +A IL
Sbjct: 356 AKLVNTVLTLYKEFHEAMSNDFNTSRALAAALKLVKTVN--AEILPAENYTAAILAYRTL 413
Query: 394 IEVCK-------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+E + + K + ++ +V+ R L K + AD IR +L G
Sbjct: 414 LEFNEVFAVLDDIVYGVAQQAQKLVGKLVDLIVKVRAELRARKMYELADNIRAELGELGI 473
Query: 441 ILEDYKNPDNGQRMTRWKQK 460
L DY T W+ +
Sbjct: 474 KLYDYPGGK-----TTWRFE 488
>gi|15241557|ref|NP_198699.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
gi|192807340|gb|ACF06122.1| At5g38830 [Arabidopsis thaliana]
gi|332006981|gb|AED94364.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 511
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 176/518 (33%), Positives = 249/518 (48%), Gaps = 83/518 (16%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++K+YNT+ ++ I P I +YVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 5 KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLD 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VT+VRN TD+DDKII+RA + + ++++ +++ D L CL PTH
Sbjct: 65 YD--VTFVRNFTDVDDKIIDRANKNG------EDPLDLSNRFCDEYLVDMGALQCLPPTH 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR + H+ +I +I+ II Y ++ F PNYG S + ++ + G RV
Sbjct: 117 QPRVSEHMDNIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS HYL FDIHGGG DL
Sbjct: 177 DSRKRNPADFALWKAAKPDEPSWESPWGPGRPGWHIECSAMSVHYLSPKFDIHGGGADLK 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+C A + N W+HNG + + KM+KS NF TI E+ +
Sbjct: 237 FPHHENEIAQTCAAC-EDSGVNYWLHNGHVTINNEKMAKSKHNFKTIREITAS------- 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ +R ++ YR P+ FT +L + L QT
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFTASQLESSSEALYYVYQTLQDLDEGLSPYQDALSEDGGK 348
Query: 347 -------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLPIF------- 385
+ S + +DLNT + A + + L
Sbjct: 349 SEQTAEGKDIIKKLKTEFESKMLDDLNTAHILTGAYQDALKFINASLSKLKKMQKKQRMS 408
Query: 386 ------------NASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILL 420
+LG+ E+ KE K + I +L++ER+
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEILKEMKLKTLIRAEIGEEGISQLIEERITAR 468
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K K F+ +D IR++L KG L D + T W+
Sbjct: 469 KNKDFAKSDEIREKLTRKGIALMD------IGKETVWR 500
>gi|254564109|ref|YP_003071204.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
gi|254271387|emb|CAX27400.1| cysteine tRNA synthetase [Methylobacterium extorquens DM4]
Length = 462
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 202/496 (40%), Positives = 274/496 (55%), Gaps = 77/496 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG VTY RN+TD+DDKI RA + + I +T QF +D L L
Sbjct: 61 YGPAHVTYARNVTDVDDKINARALERGIT------IRELTDGTLAQFHRDIRDLGVLMAD 114
Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M LI+ ++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAKGHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GGLDLIFPHHENE+AQS C + A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STS 343
TI ++L+ WP V+RL ML THYR+PID+T++ L E+ +L +W + +
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAVP 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
+ V+ AL +DLNT +A+ LH+LA S A A ++G +
Sbjct: 348 DAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSA------LKAGAGLMGFLAVTQ---- 397
Query: 404 NISIAIEKLVQERLILL--KMK-KFSS-------------------ADYIRKQLESKGFI 441
+R + +D +R L + G
Sbjct: 398 ----------AQREAARVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVS 447
Query: 442 LEDYKNPDNGQRMTRW 457
++D K+ T W
Sbjct: 448 VKDNKDGT-----TTW 458
>gi|224372980|ref|YP_002607352.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
gi|223589717|gb|ACM93453.1| cysteinyl-tRNA synthetase [Nautilia profundicola AmH]
Length = 464
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 161/482 (33%), Positives = 243/482 (50%), Gaps = 50/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY++ ++ +F+ I R+YVCGPTVYD AH+G+AR I FD+L R L
Sbjct: 1 MTIYDSHLKQKVDFKPIKEGEARIYVCGPTVYDDAHLGHARSSISFDLLRRTLEKLGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDKII + Q S+ IT +++D L +P+
Sbjct: 59 KVTFVKNFTDIDDKIINKMNQTGKSL------KEITEYYIDSYLRDMGALNVKRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + M LIQN++ G+AY+ N +I FD S Y S + D++ +
Sbjct: 113 ATESLEAMFDLIQNLLDKGYAYQLPNGDIYFDVSKDEEYCKLSNKCQDDEVVHRVDT--E 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL----GKVFDIHGGGL 238
K+NPADF LWK + ++SP+G+GRPGWHIECSAM ++ DIHGGG
Sbjct: 171 GKRNPADFALWKACKGEDDVCFDSPFGKGRPGWHIECSAMIKKHIAYNGEYEIDIHGGGA 230
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQ+ CA A W+HNGF+ + G KMSKS GN I + L
Sbjct: 231 DLFFPHHENEEAQTHCAYGEH-LAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
+ +P V+R ++ THYR P++F+ + L ++ L K + +
Sbjct: 284 -KHYPGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGLAKKQKDSEFEA 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L A+ +DLN A+ + + +E+ + D +L +LGI
Sbjct: 343 KLLEAMSDDLNISKALAVVDEFVKEANEALDKNPKDKVLKQKILSNIEFINELLGIGGSD 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + +++ I +L+++R K K F +AD IR +L S G ++D N +
Sbjct: 403 AYEYFQAGIDEETKAKINELIEKRTQAKKEKDFETADKIRDELTSMGIQIQDTPNGTVWE 462
Query: 453 RM 454
++
Sbjct: 463 KV 464
>gi|24214563|ref|NP_712044.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
56601]
gi|30316164|sp|Q8F525|SYC_LEPIN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|24195528|gb|AAN49062.1| cysteinyl-tRNA synthetase [Leptospira interrogans serovar Lai str.
56601]
Length = 471
Score = 346 bits (888), Expect = 4e-93, Method: Composition-based stats.
Identities = 162/490 (33%), Positives = 237/490 (48%), Gaps = 54/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I+ YN+L + +F DP+ + +Y CGPTVY+FAHIGN R + DVL R L+
Sbjct: 3 EIQFYNSLSGRKEKFSPSDPNRVTVYSCGPTVYNFAHIGNLRAFLFVDVLRRSLKLLGYG 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V NITDIDDKII SI +I T+ T+ F +D ++ H P
Sbjct: 63 --VDMTMNITDIDDKIIR------DSIASKKSIIEFTAPWTKAFFEDLKTVSAEILEHYP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT+ IP+M+ +IQ + G Y+ + + F NYG S+ K GTR
Sbjct: 115 KATDSIPEMVDIIQKLQKKGLVYKKDESLYFSIQKFQNYGKLSKIDTSGMKTGTRYDTDE 174
Query: 184 HKKNP-ADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++K DF+LWK E W++ G GRPGWH+ECSAM G DIH GG+DL+
Sbjct: 175 YEKEDVRDFVLWKSPKLEGETSWDTLVGTGRPGWHLECSAMIRKVYGSGVDIHTGGVDLL 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A E W+H+ L ++G+KMSKS GNF T+ +L++ +
Sbjct: 235 FPHHENEIAQSEGAFPEESFVKTWLHSEHLLVDGQKMSKSKGNFYTLRDLIQ------QG 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
IR ++ THYR ++F+ R+ EA + K ++P
Sbjct: 289 LDPKAIRFLLISTHYRSKLNFSTDRIAEASANIRKIQNCLDRILELEPDIKADFYFLFSI 348
Query: 351 ---------VLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAH 390
+L +DLN A+ + + ++ D + I
Sbjct: 349 PFVQTWKKEFEESLADDLNISKALAVVFESVKQINSLLDTNQSDSKQRIEYIQILAYFDR 408
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ E + I+ L++ER I K K F+ +D IR QL ++G ++ED K
Sbjct: 409 ILGVLNF-ESKKDLLDSEIDSLIEERQIARKNKDFARSDAIRDQLLAQGILIEDTKEGI- 466
Query: 451 GQRMTRWKQK 460
RW++K
Sbjct: 467 -----RWRKK 471
>gi|116617314|ref|YP_817685.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
gi|122272485|sp|Q03ZR0|SYC_LEUMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116096161|gb|ABJ61312.1| cysteinyl-tRNA synthetase [Leuconostoc mesenteroides subsp.
mesenteroides ATCC 8293]
Length = 468
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 158/485 (32%), Positives = 228/485 (47%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I I MYVCGPTVY++ HIGNAR I FD + R Y E
Sbjct: 1 MIYVYNTLSREKEVFKPITAGKINMYVCGPTVYNYIHIGNARSAIAFDTVRRYFEYRGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII RA++E S + +K F +DT L T +
Sbjct: 61 --VNYVSNFTDVDDKIINRAQEEGISEL------EVANKYADAFDEDTLPLNIKPATVRS 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP++I ++++I G+AYE+ ++ F YG + + + E +
Sbjct: 113 RATEVIPEIIEFVKDLIDKGYAYESEGDVYFRAKKFKGYGILAHQDLAEMEANAAGRLND 172
Query: 184 HKKNPADFILWKRSTPMEP-----GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ + + EP W SPWG GRPGWHIECS M+ YL DIHGGG+
Sbjct: 173 EETIRKEDPIDFAVWKNEPREGVISWSSPWGNGRPGWHIECSVMAQKYLSNTIDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NEIAQS +K N W+HNGF+N+ KMSKS GNF T++++L T
Sbjct: 233 DLAFPHHTNEIAQSEARTG-QKFVNYWMHNGFVNVNNEKMSKSLGNFTTLHDMLATYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
VIR + T YR PI++ L +A + L + +
Sbjct: 290 ----DPMVIRYLLTTTQYRRPINYEASTLEQARLELERIRTAYRNLMFRAETSEPGGDED 345
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNAS 388
+ A A+ +D NT +A+ A+ +L + LL
Sbjct: 346 VETLIEVQKKAFDQAMDDDFNTPNALAAIFELVSIGNTYTERNTVKVDTVQHLLGTIADL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ GIE N+ ++ +L+ +R++ + F +D +R QL+ G +ED
Sbjct: 406 LSVFGIEGLD--GNEELTTKQRELLDKRVLARESHDFERSDLLRNQLKEVGIFVEDTPQG 463
Query: 449 DNGQR 453
+
Sbjct: 464 QRWHK 468
>gi|119718240|ref|YP_925205.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
gi|166225302|sp|A1SNY3|SYC_NOCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119538901|gb|ABL83518.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
Length = 471
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 158/486 (32%), Positives = 238/486 (48%), Gaps = 55/486 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++Y+T R++ +F ++ +YVCG TV H+G+ R + FDVL R LR+
Sbjct: 1 MTFRLYDTATREVRDFVPLEEGKAGLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT++RN+TDIDDKI+ ++ ++ A + + +Q + L PT++
Sbjct: 61 D--VTFIRNVTDIDDKILVKSAEQGL------AWYQLAYRMKRQLDRAYDDLNVAPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
P AT H+P+MI LIQ +I GHAY + + ++ FD S P YG +R+ ID+ +
Sbjct: 113 PAATGHVPEMIVLIQELIAKGHAYAAEDGSGDVYFDVRSWPQYGELTRQGIDDMEAAEDA 172
Query: 180 PEKYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK P W SPWG GRPGWHIECSAM+ YLG FDIHG
Sbjct: 173 DPR-GKRDPRDFALWKGWKKDSEPETAAWPSPWGPGRPGWHIECSAMAGKYLGPAFDIHG 231
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL FPHHENE AQS A A W+HN ++ G KMSKS GN +TI +L
Sbjct: 232 GGVDLRFPHHENEQAQSRAAG--RPFATYWMHNAWITTAGEKMSKSLGNSLTIPAVL--- 286
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+ + +R ++ HYR ++F+ + L EA + +
Sbjct: 287 ----QKYRGIELRYYLVAAHYRSHVEFSFEALDEAATGFRRIENFLDRAADVLGGIGGGI 342
Query: 348 -DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
L+A+ +DL T +A+ A+H++ RE K A +LG++
Sbjct: 343 ACADFLNAMNDDLGTPAAVAAIHEVVREGNKLLAAGDSPALRGNAASVVAMLDVLGLDPA 402
Query: 398 KEHLNK------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ + + L+ +R + F SAD IR +L + G LED
Sbjct: 403 DPAWSSPGGGRTAERLETVVEGLVSDLLTQREKARADRDFVSADAIRDRLHAVGVQLEDT 462
Query: 446 KNPDNG 451
+
Sbjct: 463 PDGPKW 468
>gi|296392881|ref|YP_003657765.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
gi|296180028|gb|ADG96934.1| cysteinyl-tRNA synthetase [Segniliparus rotundus DSM 44985]
Length = 467
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 154/481 (32%), Positives = 234/481 (48%), Gaps = 47/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + EF + P + +Y+CG TV H+G+ R +VFDVL R L
Sbjct: 1 MTLRLYDTRTRVVREFAPLRPGQVSVYLCGATVQGKPHVGHLRSAVVFDVLRRWLLAKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V ++RN+TDIDDKI+ +A + + + ++F RL L P+ +
Sbjct: 61 D--VLFIRNVTDIDDKILAKAAEAG------RPWWEWAATHEREFSNAYNRLGVLPPSAE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QM I+ +I GHAY ++ FD S+P YG S + D+ G
Sbjct: 113 PRATGHITQMTTCIERLIERGHAYTGAGDVYFDVRSLPEYGKLSGHQPDDVHQGESAGAG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP W +PWG GRPGWH+EC+AM++ YLG FDIH GG+DL+F
Sbjct: 173 --KRDPRDFTLWKGSKPGEPWWPTPWGPGRPGWHLECTAMATAYLGSEFDIHCGGMDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+ A ++ A W+HNG+L+L G KMSKS GN +++ ELL +
Sbjct: 231 PHHENELAQAHGAG--DQFARFWLHNGWLSLGGEKMSKSLGNVLSLEELLTAVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
+R + HYR +F+++ + EA + + G + S
Sbjct: 283 -PQELRYYLGCAHYRSTQEFSIEAVVEAAVAYQRLESFVLRAAEQFGEIPVGQVADEFAS 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPI--------FNASAHILGIEVCKEHLNK-- 403
AL +DL A+ L + A++ A +LG +
Sbjct: 342 ALDDDLAVPKALAELQRQAKQGNTELADADPAAAATAASVRAMLAVLGCDPFDPMWASGR 401
Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + +E + R K +++AD +R +L G I+ D +
Sbjct: 402 EREEKAAFRAVDVLVEAELSRREAARAGKDWATADDVRDRLRKAGIIVTDGPDGPKWSLE 461
Query: 455 T 455
T
Sbjct: 462 T 462
>gi|256419903|ref|YP_003120556.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
gi|256034811|gb|ACU58355.1| cysteinyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
Length = 499
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 168/502 (33%), Positives = 238/502 (47%), Gaps = 63/502 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++KIYN+L R+ F ++ P ++ MYVCGPTV +H+G+ARP I FDV+YR L++
Sbjct: 1 MSELKIYNSLHRQKEVFTSLYPGHVGMYVCGPTVSGESHLGHARPYITFDVVYRYLQFLG 60
Query: 62 GEKCVTYVRNITD----------IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD +DKI +RA+ E + K T F
Sbjct: 61 Y--KVRYVRNITDAGHFEEEGREAEDKIAKRAQLEKLE------PMELVQKYTNLFHWAF 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRR 168
R CL P+ +P AT HI + I +I+ I+ G+AYE+N + FD +YG S R
Sbjct: 113 LRFNCLEPSIEPTATGHIVEQIEMIKTIMEKGYAYESNGSVYFDVKKYAESHDYGILSGR 172
Query: 169 KIDEQ--KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
+++ + + K N DF LWK + P W SPWG G PGWHIECSAMSS
Sbjct: 173 VLEDMLESSNRELDGQEEKINNVDFALWKNAPPEHIMRWPSPWGEGFPGWHIECSAMSSK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLGK FDIHGGG+DL FPHHE EIAQS A E A W+HN + + GRKM K+ N
Sbjct: 233 YLGKQFDIHGGGMDLQFPHHECEIAQSEIAHG-ELMARYWMHNNMITINGRKMGKAYNNT 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------ 338
I + EL +++ IR +L THYR +DF+ + L AE L +
Sbjct: 292 IKLTELFTGNHHLLEKAYSPMTIRFFILQTHYRSTLDFSNEALQAAEKGLQRLWAAFEVL 351
Query: 339 -------QTSTSKGIIDPA-------VLSALYNDLNTVSAIQALHKLARESTK------- 377
+D + +D NT + L +L+
Sbjct: 352 QKLSYTADAQPINEELDKQVRQWCLECEEFISDDFNTAKVLANLFELSPVINSIKGGQVK 411
Query: 378 ----NHDLLPIFNA-----SAHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ + + ILG++ N + I+ L++ R K +++
Sbjct: 412 MHELSEETFQLLKKTWQNFLIDILGLQPETLATDNSKLDGVIQLLMEMRKEAKGRKDYAA 471
Query: 428 ADYIRKQLESKGFILEDYKNPD 449
+D IR QL + G L+D K+
Sbjct: 472 SDKIRNQLLAVGIQLKDEKDGS 493
>gi|224141927|ref|XP_002324312.1| predicted protein [Populus trichocarpa]
gi|222865746|gb|EEF02877.1| predicted protein [Populus trichocarpa]
Length = 493
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 171/500 (34%), Positives = 257/500 (51%), Gaps = 74/500 (14%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ RK F+ + MYVCG T YD +HIG+AR + FDVL R L++ + V YVR
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGFD--VHYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII RA + + + ++ + ++F+ D L CL P+ +PR ++H+P
Sbjct: 59 NFTDVDDKIIARANE------LGEDPISLSKRYCEEFLHDMVYLHCLPPSVEPRVSDHMP 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
Q+I +I+ I+ +G+AY + ++ F +P YG S RK+++ + G RV KKNPAD
Sbjct: 113 QIIDMIERILENGYAYRIDGDVYFSVDKLPEYGRLSGRKLEDNRAGERVAVDSRKKNPAD 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK + EP W+SPWG GRPGWHIECSAMS+ YLG FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKSAKEGEPFWDSPWGPGRPGWHIECSAMSAAYLGHSFDIHGGGMDLVFPHHENEIA 232
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QSC A + + W+HNGF+ ++ KMSKS GNF TI +++ + +RL
Sbjct: 233 QSCAAC-RDSNISYWVHNGFVTIDSEKMSKSLGNFFTIRQVINL-------YHPLALRLF 284
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------------- 347
+L THYR P++++ +L A + QT I
Sbjct: 285 LLGTHYRSPVNYSDVQLESASERIFYIYQTLHDCENILSQHRVAFEKDAIPPDTINDINK 344
Query: 348 -DPAVLSALYNDLNTVSAIQALHKLAREST------------KNHDLLPIFNAS----AH 390
+++++ +DL+T + AL + K + +
Sbjct: 345 FHDTLVTSMSDDLHTPVLLSALSDPLKIINDMLHTRKGKKQIKRIESIAALEKMVRNALM 404
Query: 391 ILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LG+ E ++ K + I + ++ER + K K + +D IRK L +
Sbjct: 405 VLGLMPPTYNEALQQLREKALRRAKLTEDQILQKIEERTVARKDKDYEKSDAIRKDLAAL 464
Query: 439 GFILEDYKNPDNGQRMTRWK 458
G L D + T W+
Sbjct: 465 GIALMDSPD------GTSWR 478
>gi|237784960|ref|YP_002905665.1| cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
44385]
gi|259511827|sp|C4LH17|SYC_CORK4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|237757872|gb|ACR17122.1| Cysteinyl-tRNA synthetase [Corynebacterium kroppenstedtii DSM
44385]
Length = 473
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 146/488 (29%), Positives = 234/488 (47%), Gaps = 57/488 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+++ R++ +F + +Y+CG TV HIG+ R + FD+L L Y
Sbjct: 1 MTLRIFDSASRQLRDFVPLREGRASVYLCGATVQSAPHIGHLRSGVAFDILRNWLTYMGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V ++RN+TDIDDKI+ +A + N + ++F +L P+ +
Sbjct: 61 D--VAFIRNVTDIDDKILNKAAE------HNRPWWEWAATYEREFQWAYDQLGVTPPSLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT H+P+MI +Q II GH Y + + S+P+YGS S +K+DE G
Sbjct: 113 PHATGHVPEMIEYMQRIIDAGHGYAVDGNVYLSPMSLPDYGSLSGQKLDEMDQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W++PWGRGRPGWH+EC+ M++ YLG FDIH GGLDL F
Sbjct: 173 --KRDPRDFTLWKAAKPGEPSWDTPWGRGRPGWHLECTTMATKYLGAEFDIHAGGLDLKF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ+ A A W+HNG++ + G KMSKS GN +++ LL+ +
Sbjct: 231 PHHENEIAQAHAAGDG--FARYWMHNGWVTMAGEKMSKSLGNVLSVPNLLQIVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GIIDP 349
+R + HYR ++F+ L EA + + + +
Sbjct: 283 -PVELRYYLGSAHYRSMLEFSEDALREAAAGYRRLEKFVHAASSVAGKNDRTLGRSEVTD 341
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------------PIFNASAHILGI 394
A A+ +D+ +A+ +HK+ R S D A +LG+
Sbjct: 342 AFTDAMNDDIGVPAALAEVHKVVRSSNSRLDAARRGDSDAVESVVSAGEQVRAMLGVLGV 401
Query: 395 EVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ E + + + + R K +++AD +R +L + G ++ D
Sbjct: 402 DPLDEKWQEIAAESGAEHDALDTLVRAELDIRAKARAEKDWATADAVRDRLAAAGIVVTD 461
Query: 445 YKNPDNGQ 452
+ +
Sbjct: 462 TPSGAEWE 469
>gi|297184120|gb|ADI20239.1| hypothetical protein [uncultured Sphingobacterium sp. EB080_L08E11]
Length = 495
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 162/492 (32%), Positives = 233/492 (47%), Gaps = 55/492 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ I N+L + F + N+ MYVCGPTVY H+GNAR FD+++R L++
Sbjct: 10 LNIENSLTGEKEAFVPVHEGNVGMYVCGPTVYSDVHLGNARTFTSFDMIFRYLKHIGY-- 67
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V YVRNITD +DKI ++AR E I + T F K L
Sbjct: 68 KVRYVRNITDAGHLENDADAGEDKISKKARLEQVE------PMEIVQRYTVDFHKVMDAL 121
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSRRKI 170
P+ +P AT HI + I ++Q I+ G AYE+N + FD ++ +YG S RK+
Sbjct: 122 NAFPPSIEPTATGHISEQIEMVQTILDKGWAYESNGSVYFDVTAYNANGGDYGILSGRKM 181
Query: 171 DEQKM-GTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLG 228
DE + + + K+NPADF LWK+++P W SPW G PGWH+ECSAMS+ YLG
Sbjct: 182 DELQAGTRALDGQEEKRNPADFALWKKASPTHIMRWPSPWSIGFPGWHLECSAMSTKYLG 241
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ FDIHGGG+DL FPHHE EIAQ+ K A W+H L L G++MSKS GN I
Sbjct: 242 ETFDIHGGGMDLKFPHHECEIAQNSACSG-HKGARYWMHANMLTLNGKRMSKSTGNTILP 300
Query: 289 NELLETK-KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
EL + + V+R M+ HY +DF+ L AE + +
Sbjct: 301 RELFAGDSPLLDKGFSPSVVRFFMMQAHYSSVLDFSNDALLAAEKGHDRLLGALEKLDTL 360
Query: 348 DP-------------AVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNA 387
P A+ ++ NT I L + + + N L F A
Sbjct: 361 VPSKESTIALQPWIDKCYQAMSDNFNTPILIAHLFEAIKWISTAEGNIGLNAGELETFKA 420
Query: 388 SAH-----ILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
S + +LG+ + + + A+ +++ R K + +AD IR QL
Sbjct: 421 SLNAFTFELLGLRTKSADSSNAYKEALDKAMSLVIELRAQARLNKDWGTADIIRDQLHDA 480
Query: 439 GFILEDYKNPDN 450
G L+D + +
Sbjct: 481 GIQLKDGADGTS 492
>gi|157363627|ref|YP_001470394.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
gi|229558795|sp|A8F596|SYC_THELT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157314231|gb|ABV33330.1| cysteinyl-tRNA synthetase [Thermotoga lettingae TMO]
Length = 463
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 168/472 (35%), Positives = 238/472 (50%), Gaps = 42/472 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ YNTL + I EF+ +P +RMYVCGPTVY HIGNARPM+VFD L R L Y
Sbjct: 1 MRFYNTLSKHIEEFKENEPGIVRMYVCGPTVYGLIHIGNARPMVVFDALRRYLEYRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+N TDIDDKII ++ + + I+ ++ +D+ L AP P+
Sbjct: 59 RVIMVQNFTDIDDKIINKSIE------FSVDFKDISETFIAEYWRDSMALGVRAPNFSPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
++ +P++I IQN+I HAY + ++ F S P YG S R IDE K G R+
Sbjct: 113 TSDFVPEIINAIQNLIAKNHAYVVDGDVYFSVRSFPRYGELSHRSIDELKAGARIDLNEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + P EP W+SPWG GRPGWHIECS MS+ LG DIH GG DLIFPH
Sbjct: 173 KRDPLDFALWKSAKPGEPYWKSPWGNGRPGWHIECSVMSTKLLGTTLDIHAGGEDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQS + W+HNG + G KMSKS GN + E L + + A
Sbjct: 233 HENEKAQSEALTG-KTFVKYWLHNGMIKYTGDKMSKSTGNIFLLREAL-------KKYGA 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---------------WPQTSTSKGIIDP 349
+++ L HYR PI+F+ + L+ A ++ P+ +
Sbjct: 285 DALKIFFLSKHYRSPIEFSEKALSSAAKAATRINETFLRFESEFSFAIPKQDSWINEKRS 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIF----NASAHILGIEVCKE 399
+ +L +D NT A+ + +L + D L I+ +LG+ E
Sbjct: 345 IFIDSLDDDFNTPRALALIFELVNSLNRAMDDGNERDALKIYHLLRREFCPVLGLFDLPE 404
Query: 400 HLNK-NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ +I ++ L+ R L K++ +D IR +L G L+D
Sbjct: 405 RADNRSIEELVKILIDVRAELRAKKQYELSDMIRSKLRKVGIELKDMPQGTT 456
>gi|189501179|ref|YP_001960649.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
gi|189496620|gb|ACE05168.1| cysteinyl-tRNA synthetase [Chlorobium phaeobacteroides BS1]
Length = 484
Score = 346 bits (887), Expect = 5e-93, Method: Composition-based stats.
Identities = 164/494 (33%), Positives = 229/494 (46%), Gaps = 61/494 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYN+L R+ EF + +YVCGPTVY AH+G+A+ + FDV + LR+
Sbjct: 1 MALHIYNSLSRQKEEFIPLHEKIASVYVCGPTVYGHAHLGHAKSYVSFDVAVKWLRHIGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
VTY++NITD+ +DKI +AR E I T+ + D
Sbjct: 61 --SVTYIQNITDVGHLTDDADEGEDKIARQARLEKTD------PMEIAQYYTRSYYDDMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P P AT HIP+ I LI+ +I GHAYE N + F SS P+YG S R E
Sbjct: 113 RLGVDRPNIAPTATGHIPEQIALIEKLIAKGHAYEVNGNVYFSVSSFPDYGKLSGRTDQE 172
Query: 173 QK-MGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G RV + K++PADF LWK++ W SPW G PGWH ECSAM+ YLG+
Sbjct: 173 AQHSGVRVESRSEKRHPADFALWKKADSGHIMKWNSPWSTGYPGWHTECSAMAMKYLGET 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIHGGG++ FPHHE EIAQS A + W+HN + + G KM KS N + + +
Sbjct: 233 IDIHGGGMENKFPHHECEIAQSEAATD-KPYVRYWMHNNMVTVNGTKMGKSLKNSVNLKD 291
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------ 344
L T P VIR +L +HYR +DF+ + + L K +T +
Sbjct: 292 LFTTV-------PPIVIRFFILQSHYRSSLDFSETAIRASRTGLEKLQETWHALLAATPG 344
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFN 386
+ A+ +D NT AI L LA+ + IF
Sbjct: 345 SEKLDTAPFEKRFADAMNDDFNTPVAISVLFDLAKAVNTALNSGQGLSEDSLNSCRNIFA 404
Query: 387 ASA-HILGIEV--------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A ILGI K + + + L+ R + + F+ +D IR +L
Sbjct: 405 ACGRDILGIIDAADTGKGGDKTAGKEVLDNVVSILLDLRKQARENRDFALSDLIRDRLAD 464
Query: 438 KGFILEDYKNPDNG 451
G L+D ++
Sbjct: 465 SGVTLKDTRDGTEW 478
>gi|116669295|ref|YP_830228.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
gi|166200129|sp|A0JSV8|SYC_ARTS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116609404|gb|ABK02128.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 487
Score = 346 bits (887), Expect = 6e-93, Method: Composition-based stats.
Identities = 165/494 (33%), Positives = 234/494 (47%), Gaps = 59/494 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ Y+T ++ +F + P + +Y CG TV H+G+ R I FD L R L Y
Sbjct: 1 MRFYDTASAEVRDFVPLIPGKVSLYYCGATVQGLPHVGHIRSAIAFDQLTRWLEYRGF-- 58
Query: 65 CVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
VT VRN+TDIDDKI+ ++ +E P + + + Q F+K L
Sbjct: 59 RVTVVRNVTDIDDKILAKSALSFEPDFEEGPDDVREEEWWALAYRYEQAFLKAYDTLGVS 118
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQK 174
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YGS +R+KID+ +
Sbjct: 119 RPTYEPRATGHIPEMHALIQGLIDRGHAYPALDDSGDVYFDVRSWNRYGSLTRQKIDDMQ 178
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ KK+P DF LWK EP W SPWG GRPGWH+ECSAM + YLG F
Sbjct: 179 GAPDADPR-GKKDPRDFALWKGHKEGEPTTASWVSPWGTGRPGWHLECSAMVTKYLGTEF 237
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGGLDL FPHHENE+AQS A AN W+HNG + +G KMSKS GN ++ E+
Sbjct: 238 DIHGGGLDLRFPHHENEMAQSQAAGHA--FANFWMHNGMVTYQGEKMSKSIGNTVSPAEM 295
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
LE V+R + YR +D+ L EA + +
Sbjct: 296 LELA-------SPRVVRYYLGQAQYRSVLDYQPTSLQEAAAAVERIDGFIARAVRTLSGS 348
Query: 345 -------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLL 382
G + A +A+ +DLN A+ ALH R L
Sbjct: 349 VVSGAAELLFSSHGTVPDAFAAAMDDDLNVPQALAALHDTVRAGNTALTAGDNSAARTAL 408
Query: 383 PIFNASAHILGIE-----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ E + + + +E + R K ++++D IR L +
Sbjct: 409 HSVTDMLRVLGLNDVAAPARDEQADTALGVLVEAQLGARAQARATKDWAASDAIRDTLAA 468
Query: 438 KGFILEDYKNPDNG 451
G ++ED + +
Sbjct: 469 AGVVVEDGPDGASW 482
>gi|297566117|ref|YP_003685089.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
gi|296850566|gb|ADH63581.1| cysteinyl-tRNA synthetase [Meiothermus silvanus DSM 9946]
Length = 481
Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats.
Identities = 171/503 (33%), Positives = 229/503 (45%), Gaps = 80/503 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL R+ F P + MYVCGPTVY H+G+AR +VFDVL R L +
Sbjct: 1 MLLQLYNTLTRQKEPFVPATPGYVGMYVCGPTVYGDPHLGHARGPVVFDVLRRWLLHQG- 59
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD+ +DKI +RA+ E + K T +
Sbjct: 60 -LQVRYVRNITDVGHLTDDADEGEDKIQKRAKLERLE------PMEVAEKYTWAYFDAMD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P+ PRA HIP+ I L Q +I GHAYE N + F SS P YG S R +E
Sbjct: 113 DLNVLRPSISPRAAGHIPEQIELTQALIEKGHAYEKNGSVYFRVSSWPEYGKLSGRNFEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
Q+ G RV + K++P DF LWK + P W SPWG+G PGWHIECSAMS YLG+ F
Sbjct: 173 QEAGARVAVREEKEDPRDFALWKAADPEHIMRWNSPWGQGFPGWHIECSAMSLKYLGEGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGG+DL FPHHE EIAQ+ A A W+H+ + L G KM+KS GN + + +L
Sbjct: 233 DIHGGGIDLQFPHHECEIAQAEAAGHA--FARYWVHHNHVLLNGEKMAKSTGNLVILRDL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------- 343
L + V+R +L +HYR +DFT L A +
Sbjct: 291 LNQNE-------PMVVRFYLLQSHYRSVLDFTSAGLEAARNGYLRLLGAYREVRRQLHAA 343
Query: 344 -----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP--------- 383
++ AL +DLNT AI A K
Sbjct: 344 KPGKHAALEKALDTLEADFSQALNDDLNTPQAIAAFFVFLPALNKALADKAGKDSLERAE 403
Query: 384 -IFNASAH-ILGIEVCKEHLNKNISIAIEKLV-------------QERLILLKMKKFSSA 428
+F +LG+ + +E + R + K F+ +
Sbjct: 404 KVFAELGEGVLGLFPAR---------VLEARLGGALLDGLIQLLLDLRERARQEKNFALS 454
Query: 429 DYIRKQLESKGFILEDYKNPDNG 451
D+IR +L G ++ED K
Sbjct: 455 DWIRHRLSELGVVVEDTKEGPKW 477
>gi|71892086|ref|YP_277816.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
gi|109894884|sp|Q493A1|SYC_BLOPB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|71796192|gb|AAZ40943.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus
str. BPEN]
Length = 473
Score = 345 bits (886), Expect = 6e-93, Method: Composition-based stats.
Identities = 176/494 (35%), Positives = 243/494 (49%), Gaps = 58/494 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL +K +F I+ I++YVCG TVYD H+G+AR IVFD + R LR+ +
Sbjct: 1 MLKIFNTLTKKKEKFIPINAGKIKIYVCGVTVYDLCHLGHARTFIVFDSVIRYLRHCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V+YVRNITDIDDKII+RA + N+ +T++ Q+ D L L P ++P
Sbjct: 61 --VSYVRNITDIDDKIIKRAYEN------NETTQQLTNRMIQEMHLDLDALNILRPNYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ T HI +I I +I HAY N +I+F ++ NYG S ++ + +
Sbjct: 113 KVTEHIDIIIKFICLLISKKHAYTAPNGDIMFSVETMHNYGVLSNKENPPKIHDNILKIP 172
Query: 183 YHKKNPADFILWKR----STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
KKNP DF+LWK+ + EP W SPWG GRPGWHIECSAM+ G DIHGGG
Sbjct: 173 NIKKNPMDFVLWKKTTYNNKLGEPCWSSPWGLGRPGWHIECSAMNYSIFGNQIDIHGGGS 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHH+NEIAQS CA ANIW+H+G L L KMSKS NF TI ++L
Sbjct: 233 DLIFPHHDNEIAQSVCAHET-SYANIWMHSGLLLLNYEKMSKSLNNFFTIRDIL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
+ + IR ++ HYR + + L A+ L +
Sbjct: 286 -KHYDPETIRFFLMSAHYRSQLKYNDNNLKNAQTSLKRLYIALRDTNPTIQPNGGDNEGE 344
Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIE- 395
+S + +D NT A L +A + A+I+G+
Sbjct: 345 YFISKFISKMNDDFNTPEAYSVLFDIAHRLNNLKIKGHSLLAQGMAATLKYLANIIGLLH 404
Query: 396 VCKEHLNKNIS---------IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
E K I+ I+KL+Q R + K ++ AD IRK+L G LED
Sbjct: 405 QNPEIFLKKITLKHNKNRHFEKIQKLIQCREVARKNNQWELADSIRKKLTVMGITLEDGP 464
Query: 447 NPDNGQRMTRWKQK 460
+T+W K
Sbjct: 465 TG-----ITKWHFK 473
>gi|149194602|ref|ZP_01871698.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
gi|149135346|gb|EDM23826.1| cysteinyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
Length = 464
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 160/482 (33%), Positives = 246/482 (51%), Gaps = 50/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY++ ++ EF I +R+YVCGPTVYD AH+G+AR I FD+L R L
Sbjct: 1 MKIYDSHLKEKVEFIPIKEKEVRIYVCGPTVYDDAHLGHARSSISFDLLRRTLECLGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDKII++ + S+ IT +++++D L +P+
Sbjct: 59 KVTFVKNFTDIDDKIIKKMNETKKSL------KEITEYYIKRYLEDMDALNVKRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + M +IQ ++ G+AY+ N +I FD S Y S + D++ +
Sbjct: 113 ATQSLEAMFEIIQILLDKGYAYKLPNGDIYFDVSKDEEYCKLSNKCQDDEVVHRVEI--E 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYL----GKVFDIHGGGL 238
KKNPADF LWK + ++SP+G+GRPGWHIECSAM ++ DIHGGG
Sbjct: 171 GKKNPADFALWKACKGESDVCFDSPFGKGRPGWHIECSAMIKKHIAYDGEYEIDIHGGGA 230
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS CA A W+HNGF+ + G KMSKS GN I + L
Sbjct: 231 DLFFPHHENEEAQSHCAYGGH-LAKYWMHNGFVQINGEKMSKSLGNSFFIKDAL------ 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
+ + V+R ++ THYR P++F+ + L ++ L K + +
Sbjct: 284 -KHYSGEVLRFYLMSTHYRAPLNFSEEDLIASKKRLDKLYRLKKRIYGVSKKQQDKSFEE 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L+A+ +DLN A+ + + +++ +N D ++ +LG+
Sbjct: 343 NLLNAMSDDLNISKALAVVDEFIKDANENLDKNPKDKILKQKIVSNIEFINKLLGVGGSD 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + +++ IE+L+ +R K K F AD IR +L+ G ++D N +
Sbjct: 403 AYEYFQAGIDEETKKKIEELIAKRSEAKKEKNFELADKIRDELKEMGISIQDTPNGTKWE 462
Query: 453 RM 454
R+
Sbjct: 463 RV 464
>gi|313889588|ref|ZP_07823232.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
gi|313122015|gb|EFR45110.1| cysteine--tRNA ligase [Streptococcus pseudoporcinus SPIN 20026]
Length = 447
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 157/466 (33%), Positives = 235/466 (50%), Gaps = 36/466 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F + + I MYVCGPTVY++ HIGNAR + FD + R Y
Sbjct: 1 MIKIYDTMTRSLRDFVPLKENQISMYVCGPTVYNYIHIGNARSAVAFDTIRRYFEYSGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + S + K + F+ DT L + P
Sbjct: 60 -HVNYISNFTDVDDKIIKAAAEAGIS------PKALADKFIEAFMADTKELGIKPASQHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R +++ ++I +Q +I G AYE+ ++ F + NY + + + + ++G
Sbjct: 113 RVMDYMGEIIAFVQALIQKGFAYESAGDVYFRVTKSENYARLANKTLADLEVGASGRTDA 172
Query: 184 H---KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + P E W+SPW +GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 ETALKENPLDFALWKSAKPGEISWDSPWSKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+ ++ KMSKS GNF+T++E+LE+
Sbjct: 233 EFPHHTNEIAQSEAKTG-QTFANYWMHNGFVKVDNEKMSKSLGNFVTVHEMLESV----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPA 350
++R + YR+PI+FT + + +AE+ L T + +
Sbjct: 287 --DGQILRFFLATQQYRKPINFTEKAIRDAEVNLKYLKNTYLLPLQTGSDTSRLFDFKKS 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK---NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
A+ +D N + I + A+ + + F + GI +E +
Sbjct: 345 FKEAMDDDFNAANGITVIFDFAKWINSGHYDQTVKTAFGEMLEVFGIVFQEE----VLDS 400
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+E L+ ER + F+ AD IR L S+G L D K+ R
Sbjct: 401 DVEALIAERQAARAARDFTKADSIRDHLASQGIKLLDTKDGVRWTR 446
>gi|13877761|gb|AAK43958.1|AF370143_1 putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|15293251|gb|AAK93736.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197327|gb|AAM15026.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
gi|20197896|gb|AAD20662.2| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 493
Score = 345 bits (885), Expect = 8e-93, Method: Composition-based stats.
Identities = 179/500 (35%), Positives = 255/500 (51%), Gaps = 74/500 (14%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ RK F+ + MYVCG T YD +HIG+AR + FDVL R L++ E V+YVR
Sbjct: 1 MSRKKELFKPKVEGKVGMYVCGVTAYDLSHIGHARVYVTFDVLLRYLKHLGYE--VSYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII RA++ + + ++ + ++F +D +L CL P+ QPR ++HIP
Sbjct: 59 NFTDVDDKIIARAKE------LEEDPISLSRRFCEEFNRDMEQLQCLDPSVQPRVSDHIP 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
Q+I LI+ I+ +G+AY+ + +I F P YG S RK+++ + G RV KK+PAD
Sbjct: 113 QIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKLEDNRAGERVAVDTRKKHPAD 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK + EP WESPWGRGRPGWHIECSAMS+ YLG FDIHGGG+DL+FPHHENEIA
Sbjct: 173 FALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIA 232
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QSC A + WIHNGF+ ++ KMSKS GNF TI ++++ + +RL
Sbjct: 233 QSCAACD-SSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQVIDL-------YHPLALRLF 284
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------------KGI 346
++ THYR PI+++ L A + QT
Sbjct: 285 LMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGEKDSTFENGSVPSDTLTSINT 344
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLPIFNASAH 390
++++ +DL T + A+ + + L
Sbjct: 345 FRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLT 404
Query: 391 ILGI------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
ILG+ EV ++ K + + + VQER K K++ +D IRK L
Sbjct: 405 ILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKV 464
Query: 439 GFILEDYKNPDNGQRMTRWK 458
G L D T W+
Sbjct: 465 GIALMDS------PEGTTWR 478
>gi|227503949|ref|ZP_03933998.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
gi|227199471|gb|EEI79519.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
Length = 477
Score = 345 bits (885), Expect = 9e-93, Method: Composition-based stats.
Identities = 142/487 (29%), Positives = 221/487 (45%), Gaps = 55/487 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R +F + + +Y+CG T HIG+ R + FD+L R L
Sbjct: 5 SNLRIFDTATRTQRDFVPVKEGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLMAQGL 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + S ++F K L L P+ +
Sbjct: 65 D--VAFVRNVTDIDDKILNKAAENG------RPWWEWVSTYEREFTKAYNTLGVLPPSVE 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---------NEIIFDTSSIPNYGSFSRRKIDEQ 173
PRAT + QM+ +Q +I G AY + FD ++ +
Sbjct: 117 PRATGFVTQMVDYMQRLIDAGFAYAVPDDTAGVDGAGSVYFDVTAWNAAEGSDYGSLSGN 176
Query: 174 KMGTRVPEK------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
++ + K+ P DF LWK + P EP W +PWG+GRPGWH+ECSAMS++YL
Sbjct: 177 RVEDMDQGEGQEALARGKRGPQDFALWKGAKPGEPSWPTPWGKGRPGWHLECSAMSTYYL 236
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G FDIH GGLDL FPHHENE+AQS A +K AN W+HN ++ + G KMSKS GN +
Sbjct: 237 GSEFDIHCGGLDLQFPHHENEVAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLA 294
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
I+ +LE + +R + HYR ++++ LTEA +
Sbjct: 295 IDNMLEIVR-------PVELRYYLGSAHYRSVLEYSEAALTEAAAGYRRIEDFVNKFDDL 347
Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILG 393
G A+ +D+ A+ +H R K A A +LG
Sbjct: 348 VVGDWTQGFEDAMNDDIAVPKALAEIHTTVRAGNKALAEGSADEARKAAESVRAMAAVLG 407
Query: 394 IEVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ E + + + ++ ++ R K +++AD +R +L + G + D
Sbjct: 408 FDPLDEQWKDGTLTSNADAALDVLVQAELERRTQARAEKDWATADAVRDRLAAAGITITD 467
Query: 445 YKNPDNG 451
+
Sbjct: 468 TADGPTW 474
>gi|255021318|ref|ZP_05293366.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
gi|254969181|gb|EET26695.1| Cysteinyl-tRNA synthetase [Acidithiobacillus caldus ATCC 51756]
Length = 471
Score = 345 bits (885), Expect = 1e-92, Method: Composition-based stats.
Identities = 184/480 (38%), Positives = 251/480 (52%), Gaps = 47/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I++++E + + P + +YVCG TVYDF H+G+AR M+ FD + R LR
Sbjct: 6 PPIHIHDSMEGRKLPLSLVQPGKVGIYVCGMTVYDFCHLGHARVMVTFDTVVRYLRARGL 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRNITDIDDKII RA + + + +T + +D L C+APT +
Sbjct: 66 E--VTYVRNITDIDDKIIRRAAERG------EGLDSLTQRFIDAMHEDEVALGCIAPTVE 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ QM+ LI+ ++ GHAY N ++ + S P YG S R ++E G RV
Sbjct: 118 PRATQHVGQMLELIETLVRRGHAYAPGNGDVYYAVRSFPAYGRLSGRSLEELHSGARVEP 177
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP W+SPWG GRPGWHIECSAMS LG FDIHGGG DL+
Sbjct: 178 GEDKRDPLDFALWKAAKPGEPAWDSPWGPGRPGWHIECSAMSQETLGCRFDIHGGGADLL 237
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNGF+ ++ KMSKS GNF + +LL
Sbjct: 238 FPHHENEIAQSQGAG--CAFAQHWMHNGFVRIDEEKMSKSLGNFRLVRDLLPI------- 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------PAV 351
+ V+R +L +HYR P++F+ + L +A L++ D P
Sbjct: 289 YGGEVLRFFILNSHYRSPLNFSEKLLEQARSGLTRLYTALRELPDDDGSILPEDSWGPRF 348
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGIEVCKEH---- 400
SA+ +D +T A+ L LARE + D L +LGI +
Sbjct: 349 HSAMADDFHTPEALAVLFDLAREINRRRDAGEPFAALARRLRELGAVLGILQRRPEDFLR 408
Query: 401 --LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
IE + R + + F+ AD +RK+LE G +LED G T W+
Sbjct: 409 GDAAGIDVDWIEGRIAARAAARRERNFAEADRLRKELEECGILLED------GPGGTTWR 462
>gi|108706130|gb|ABF93925.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706131|gb|ABF93926.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|218192068|gb|EEC74495.1| hypothetical protein OsI_09969 [Oryza sativa Indica Group]
gi|222624173|gb|EEE58305.1| hypothetical protein OsJ_09367 [Oryza sativa Japonica Group]
Length = 528
Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats.
Identities = 183/535 (34%), Positives = 263/535 (49%), Gaps = 101/535 (18%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++N++ +K F+ + +RMYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 9 PQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 68
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII+RA + + ++ ++S+ +F+ D +L CL PT +
Sbjct: 69 E--VEYVRNFTDIDDKIIKRANEAG------ETVTSLSSRFINEFLLDMAQLQCLPPTCE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HI +I LI I+ +G AY ++ F + P Y S S RK+D G+RV
Sbjct: 121 PRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVD 180
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIF
Sbjct: 181 TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIF 240
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A E W+HNGF+N + +KMSKS+ NF TI ++++ +
Sbjct: 241 PHHENELAQSRAAY-PESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL-------Y 292
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
+R ++ THYR ++ + + L A + QT +
Sbjct: 293 HPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQYRGENISVPVPV 352
Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------ 380
L ++ +DL T + L + N +
Sbjct: 353 EEQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQQKLEQQKKKQQQ 412
Query: 381 ------------------------LLPIFNASAHILGI-------EVCKEHLNKNI---- 405
L ILG+ E K+ +K +
Sbjct: 413 QKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEALKQLKDKALKRAG 472
Query: 406 --SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+++ +++R K K+F +D IRKQL SKG L D T W+
Sbjct: 473 LTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPT------GTVWR 521
>gi|260578396|ref|ZP_05846310.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
[Corynebacterium jeikeium ATCC 43734]
gi|258603418|gb|EEW16681.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase)(CysRS)
[Corynebacterium jeikeium ATCC 43734]
Length = 486
Score = 345 bits (884), Expect = 1e-92, Method: Composition-based stats.
Identities = 151/491 (30%), Positives = 236/491 (48%), Gaps = 63/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+T R++ +F+ I + +Y+CG TV HIG+ R + FD+L L +
Sbjct: 11 LRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGLD- 69
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN+TDIDDKI+ +A + N + + + F +L P+ +PR
Sbjct: 70 -VAFVRNVTDIDDKILTKAAEN------NRPWWEWAATHERAFNWAYDQLGVTPPSIEPR 122
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+PQMI +Q II +GH Y A+ + ++I NYG S +K+DE G
Sbjct: 123 ATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESAGTG-- 180
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG FDIH GGLDL FPH
Sbjct: 181 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQFPH 240
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 241 HENEAAQATAAGDG--FARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------P 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
+R + HYR ++++ L EA + + G +
Sbjct: 292 VELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLMRAIEYVTGETAVDPQALPVGEV 351
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHILGI 394
+ +DL ++ +H + RE K + P A A +LG+
Sbjct: 352 PAQFAEKMDDDLAVPQSLAVIHDIVREGNKLLEAKPTDEVKQQVKQIAGQVRAMAAVLGV 411
Query: 395 EVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ E + + + ++ ++ R K +++AD +R +L G
Sbjct: 412 DPLSETWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEAGI 471
Query: 441 ILEDYKNPDNG 451
+ D +
Sbjct: 472 EVTDTADGAKW 482
>gi|303327042|ref|ZP_07357484.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|302863030|gb|EFL85962.1| cysteine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
Length = 483
Score = 344 bits (883), Expect = 1e-92, Method: Composition-based stats.
Identities = 181/499 (36%), Positives = 241/499 (48%), Gaps = 69/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL R+ EF + P + MYVCG T YD+ HIG+AR +VFD L R LR+ E
Sbjct: 1 MQIYNTLGRQKEEFIPVRPGKVHMYVCGITAYDYCHIGHARSALVFDALVRHLRHLGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII RA +E + F +D RL L +PR
Sbjct: 60 -VTFVRNFTDVDDKIINRANKEGRD------WQEVAQTYIDAFHEDMDRLGVLRADLEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +IPQ+ L +I G AY + ++ F S P YG S R +DE G RV
Sbjct: 113 ATEYIPQIQELCAKLIAEGTAYATPSGDVYFRVRSYPPYGKLSGRSLDELLSGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAMSS YL DIHGGG DL+FP
Sbjct: 173 EKEDPLDFALWKAAKPGEPSWDSPWGKGRPGWHIECSAMSSPYL--PLDIHGGGQDLVFP 230
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS R E A W+HNGF+ + KMSKS GNF TI ++L + +
Sbjct: 231 HHENEIAQSEAVCRCE-LARYWVHNGFVQVNAEKMSKSLGNFKTIRDILGS-------YL 282
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
+R +L HYR PIDFT + + EAE + +
Sbjct: 283 PETLRFFLLGKHYRSPIDFTAEGMDEAEKAQHRVYSSLMEARKALERASWKKTPLPAELS 342
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------------NHDLLPIF 385
+ A +AL +DLNT A+ + R + D L
Sbjct: 343 AEWAALPQAFEAALDDDLNTAQALGQIFSQVRIVNRLLEEKNLRAAESTRDLLEDFLARA 402
Query: 386 NASAHILGIEVCKE-----------HLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRK 433
LG+ KN+ +E L+++R + K F+ +D +R+
Sbjct: 403 RDWDAQLGLFGRDPVEFLTELRAMRAARKNLDMDRVEDLLRQRREVRMQKDFTRSDALRR 462
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L G + D
Sbjct: 463 ELLDLGVNVRDTPEGQAWD 481
>gi|323359183|ref|YP_004225579.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
gi|323275554|dbj|BAJ75699.1| cysteinyl-tRNA synthetase [Microbacterium testaceum StLB037]
Length = 464
Score = 344 bits (883), Expect = 2e-92, Method: Composition-based stats.
Identities = 162/479 (33%), Positives = 238/479 (49%), Gaps = 49/479 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T + + +F +DPSN+ +YVCGPTV HIG+ R + FD+L R L + YG
Sbjct: 1 MTVRLYDTRAQALRDFAPLDPSNVTVYVCGPTVQSGPHIGHVRAALAFDLLRRWLAHRYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+VRN+TDIDDK++ A + + + +F + + L PT++
Sbjct: 61 --RVTFVRNVTDIDDKVLANA-------TATEPWWALAYRMELEFSRAYAAIGILPPTYE 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT + QM LI +I GHAY A ++ FD S P YG +R+ +D + +
Sbjct: 112 PRATASVTQMQELIAELIERGHAYAAAGDVYFDVRSWPAYGELTRQSLDAMEPAADADPR 171
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK + EP W SPWG GRPGWHIECSAMS YLG FDIHGGGLD
Sbjct: 172 -GKRDPRDFALWKGAKDDEPASATWASPWGAGRPGWHIECSAMSRRYLGPEFDIHGGGLD 230
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A A W+HNG + ++G+KMSKS GNF +++L
Sbjct: 231 LRFPHHENEIAQSTAAGDA--FARYWVHNGLVTVDGQKMSKSLGNFTLASDVLAEN---- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GI 346
V+R A+ HYR +D + + EA L + G
Sbjct: 285 ---DPRVVRYALAAAHYRSNLDVSDRAFAEAASALGRIATFRQRVLRAAGADPTVILPGD 341
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVC 397
+ +A+ +DL+ A+ +H+ R D + A ILG++
Sbjct: 342 VPETFAAAMDDDLSVPQALAVVHETVRAGNVALDAGDLDAGVAAHRSVAAMLGILGLDAD 401
Query: 398 KE-----HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ ++ +R K +++AD IR + + G LED +
Sbjct: 402 EPAVATGSSETALDALVQTMITQRAQARADKDWAAADRIRDAIAAAGITLEDTPAGTHW 460
>gi|239816065|ref|YP_002944975.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
gi|259511846|sp|C5CPX0|SYC_VARPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|239802642|gb|ACS19709.1| cysteinyl-tRNA synthetase [Variovorax paradoxus S110]
Length = 459
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 168/485 (34%), Positives = 227/485 (46%), Gaps = 64/485 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R++ EF + P +RMYVCG TVYD H+G+AR MI FD++ R L+
Sbjct: 1 MSLRIYNTLSRELEEFSPLQPGRVRMYVCGMTVYDLCHLGHARSMIAFDLVQRWLKASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + +D L PTH+
Sbjct: 60 -LAVTYVRNITDIDDKIIRRAVENG------ETIRSLTDRMIDALHEDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT++IPQM+ +I + G AY N ++ + P YG S + IDE G RV
Sbjct: 113 PRATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAVRKFPGYGKLSGKSIDELHAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P D +LWK + P EP W S +G GRPGWHIECSAM+ LG+ DIHGGG
Sbjct: 173 LDGKDDPLDPVLWKSAKPSEPEEVKWASEFGPGRPGWHIECSAMACELLGETLDIHGGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+HNGF+ + KMSKS GNF I ++L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLANYWMHNGFIVTDNEKMSKSLGNFFLIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGII 347
+ + A IR ++ HYR P++++ L +A L +
Sbjct: 286 -KKYDAETIRFFVVRAHYRRPLNYSDVHLDDARASLKRLYTSLDLVAPQALAAIDWNDPY 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL---- 401
+A+ D T A+ L LA E + + A L I
Sbjct: 345 AARFKAAMDEDFATPEAVAVLFDLAGEVNRTQSPAQAGLLKALGGCLNILQDDPKRFLRA 404
Query: 402 -NKNISIAIEKLVQ-------------ERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I+ + D IR L ++G +L+D
Sbjct: 405 GTTLDEATIQAQIDARAAAKAAKNFAEA-------------DRIRNDLLAQGIVLKDSPT 451
Query: 448 PDNGQ 452
Sbjct: 452 GTTWA 456
>gi|332879668|ref|ZP_08447361.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332682385|gb|EGJ55289.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 502
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 161/491 (32%), Positives = 230/491 (46%), Gaps = 44/491 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK ++KI+N+L + F + +N+ MYVCGPTVY H+GN R + FD +YR L++
Sbjct: 11 MKHQLKIFNSLTGEKEVFVPLHENNVGMYVCGPTVYSNVHLGNVRTFMSFDFIYRALKFL 70
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 71 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 128
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 129 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNKRGLNYGELSRRNIEE 188
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K+NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 189 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 248
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ E W+H L + G++MSKS GN+I +
Sbjct: 249 FDIHGGGMDLKFPHHECEIAQGKAGHG-ESPVRYWMHANMLTMNGQRMSKSTGNYILPMQ 307
Query: 291 LLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
L+ F + + VIR + HYR +D + + + AE ++ +
Sbjct: 308 LITGNNTFFEKPFAPAVIRFCFMQAHYRSVLDISNEAMLAAEKGFTRLMEAMKILNELTT 367
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLAR------------ESTKNHDLL 382
AL +D N+ I L + + + ++L
Sbjct: 368 EVTHPTALPIAEWKQKCYEALLDDFNSPILIAHLFEAVKWVFQLKNGEEKISVEELNELK 427
Query: 383 PIFNAS-AHILGI--EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+ NA +LG+ E N + ++ L+ R+ K ++ +D IR L G
Sbjct: 428 TLMNAFVFDVLGLQAEQLAADNNDKLDGVLQLLIDMRMEARANKDWALSDKIRDALLPLG 487
Query: 440 FILEDYKNPDN 450
L+D K+ +
Sbjct: 488 IQLKDGKDGTS 498
>gi|218533086|ref|YP_002423902.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
gi|218525389|gb|ACK85974.1| cysteinyl-tRNA synthetase [Methylobacterium chloromethanicum CM4]
Length = 462
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 206/482 (42%), Positives = 281/482 (58%), Gaps = 49/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG VTY RN+TD+DDKI RA + + I +T QF +D L L
Sbjct: 61 YGPAHVTYARNVTDVDDKINARALERGIT------IRELTDGTLAQFHRDIRDLGVLMAD 114
Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M LI+ ++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLSGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GGLDLIFPHHENE+AQS C + A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STS 343
TI ++L+ WP V+RL ML THYR+PID+T++ L E+ +L +W + +
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEARP 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
V+ AL +DLNT +A+ LH+LA S A A ++G + +
Sbjct: 348 DAGAPEGVVEALCDDLNTPAALGELHRLAGTSPSA------LKAGAGLMGFLAVTQAQRE 401
Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+E L+ ER K ++++D +R L + G ++D K+ T
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKDGT-----T 456
Query: 456 RW 457
W
Sbjct: 457 TW 458
>gi|295838034|ref|ZP_06824967.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
gi|197699162|gb|EDY46095.1| cysteine-tRNA ligase [Streptomyces sp. SPB74]
Length = 467
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 159/485 (32%), Positives = 243/485 (50%), Gaps = 49/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T R+I +F + P + +Y+CG TV HIG+ R + FD++ R Y
Sbjct: 1 MTIRLYDTRARQIRDFFPLVPGCVSIYLCGATVQGVPHIGHIRSGLDFDIMQRWFAYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+VRN+TDIDDKII+++ ++ + I +N + F L CL PT++
Sbjct: 61 E--VTFVRNVTDIDDKIIKKSAEQ------DRPWWAIGYENERAFNAAYDALGCLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +++ +I GHAYE+ + FD S P+Y S +++ + + +
Sbjct: 113 PRATGHITEMIEMMRTLIARGHAYESGGNVYFDVRSFPDYLELSHQEL-DNLLQPSGEGE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF +WK + P EP WE+PWGRGRPGWH+ECSAM+ YLG FD+HGGGLDLIF
Sbjct: 172 SGKRDARDFAMWKAAKPGEPSWETPWGRGRPGWHLECSAMAHKYLGTAFDVHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS ++ A W+HN ++ + G KM+KS GN + ++E++ + W
Sbjct: 232 PHHENEIAQSRAYG--DEFAKYWVHNAWVTMSGEKMAKSLGNSVLVSEMV-------QRW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGIIDPAV 351
V+R + HYR I+++ + + EAE + + PA
Sbjct: 283 RPIVLRYYLATPHYRSMIEYSEEAVAEAESAFGRIEGFVQRVTELNGGEVAPAAEVPPAF 342
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
A+ +DL A+ +H R+ L A +LG++
Sbjct: 343 AEAMDDDLGVPQAVAVVHTTVRQGNSALGADDKEAAVARLAEVRAMLGVLGLDPQSPQWA 402
Query: 403 KNISIAIEKL-----------VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E L +++R K + +AD IR QL G +ED
Sbjct: 403 AVGGEQAEDLHGVVDTLVRLVLRQREDARARKDWPAADAIRDQLAQSGLAIEDSPQGPRW 462
Query: 452 QRMTR 456
+R
Sbjct: 463 TLGSR 467
>gi|189183685|ref|YP_001937470.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
gi|229470555|sp|B3CRX9|SYC_ORITI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|189180456|dbj|BAG40236.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
Length = 478
Score = 344 bits (882), Expect = 2e-92, Method: Composition-based stats.
Identities = 185/493 (37%), Positives = 272/493 (55%), Gaps = 53/493 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL RK F ++ +++MYVCGPTVYD HIGNAR ++V+D+LYR+L YG
Sbjct: 1 MNLYIYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSLLYG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +TYVRNITDIDDKII RA++ S I +T + T +F +D + L C PT +
Sbjct: 61 RQNITYVRNITDIDDKIINRAKELKIS------IFKLTHETTIKFHEDMSYLGCCNPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT++I MI +I ++I G+AY + + F + +Y SRR D + +R
Sbjct: 115 PKATDNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMILNSRESS 174
Query: 182 KYHKKNPADFILWKR----STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K ADF+LWK + ++ ++SPWG+GRPGWHIECSAMS +LG+ FDIHGGG
Sbjct: 175 EPQKSYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA + A W+HNGFL ++G KMSKS NF+T+ +L
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPESRHALYWVHNGFLTVKGEKMSKSLNNFVTVRDL------ 288
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TS 341
++ +RL L THYR+P+DF + L +A+ +++
Sbjct: 289 QKQNINGAAVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNGTAQQQDNIKAE 348
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARES---TKNHDLLPI---FNASAHILGIE 395
+SAL +DLN+ AI L +A++ ++ D L + ++++LGI
Sbjct: 349 FKGNAFTVEFISALLDDLNSPKAIACLLNIAKQIRRQNQSEDKLALTQALLYASNLLGIL 408
Query: 396 VCKEHLNKNISI---------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ + + + I+ L+ +R+ + K ++ AD IR QL S G L D
Sbjct: 409 HNYQFIKDSNDVKDNSNVTPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISLTDKA 468
Query: 447 NPDNGQRMTRWKQ 459
+ T WK
Sbjct: 469 DGT-----TSWKV 476
>gi|319760441|ref|YP_004124379.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
gi|318039155|gb|ADV33705.1| cysteinyl-tRNA synthetase [Candidatus Blochmannia vafer str. BVAF]
Length = 468
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 179/488 (36%), Positives = 240/488 (49%), Gaps = 53/488 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL +K + I+ + I++YVCG TVYD H+G+AR +FD + R L Y +
Sbjct: 1 MLKIFNTLTQKKEILKPINFNTIKLYVCGVTVYDLCHLGHARTFSIFDTIIRYLNYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITDIDDKII+RA ++ I T++ Q+ D L L P H+P
Sbjct: 61 --VEYTRNITDIDDKIIQRA------FSHHETIVQFTNRMIQEMYIDLDNLNILRPKHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ TN+I +I I ++ HAY N +++F ++ YG SR K Q +
Sbjct: 113 KVTNYIDTIINCIHLLLKKKHAYITRNGDVMFSINTANKYGILSRNKKLIQSISKYTNHN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKN ADF+LWK + EP W SPW +GRPGWHIECSA+S + LGK DIHGGG DL+F
Sbjct: 173 TIKKNSADFVLWKSAKFNEPYWMSPWSKGRPGWHIECSAISHNILGKNIDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
PHHENEIAQS CA I+ NIW+H G L L KMSKS NF TI E+L +
Sbjct: 233 PHHENEIAQSACAYSIDPNVYVNIWMHVGMLLLNNEKMSKSLNNFFTIREIL-------K 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP----------- 349
+ IR +L HYR + + + A++ L + I
Sbjct: 286 KYDPETIRYFLLSAHYRNQLKYNDNNMKSAQLALKRLYIALYGINPIVHSANDEERYFTL 345
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH 400
+ + +D NT A L ++A E + L A+ILGI
Sbjct: 346 KFIEKMNDDFNTPEAYSVLFEMAHELNRLKSKHYYIRAQRLATQLKLLANILGILYQNPE 405
Query: 401 ----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
N I+KL+Q R K K + AD IR QL + G ILED
Sbjct: 406 NYLQCQVSKNKNPFEIEKIQKLIQIREDARKNKNWELADKIRTQLTTLGVILEDEPEGK- 464
Query: 451 GQRMTRWK 458
TRW+
Sbjct: 465 ----TRWR 468
>gi|118472553|ref|YP_890296.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|187629830|sp|A0R558|SYC_MYCS2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118173840|gb|ABK74736.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 477
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 153/475 (32%), Positives = 229/475 (48%), Gaps = 46/475 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T+ + +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 16 LRLYDTMAGAVRDFVPLRPGHASIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTANGYD- 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 75 -VAFIRNVTDIDDKILNKAADAG------RPWWEWAATFERAFSAAYDALGVLPPSAEPR 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QM+ LI+ +I GHAY A ++ FD S+P+YG S +ID+ G V
Sbjct: 128 ATGHITQMVELIERLIDKGHAYAAGGDVYFDVLSLPDYGQLSGHRIDDVHQGEGVATG-- 185
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL+FPH
Sbjct: 186 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGPEFDIHAGGMDLVFPH 245
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 246 HENEIAQAHGAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVRAAE----- 298
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSAL 355
+R + HYR ++F+ L +A + G P +AL
Sbjct: 299 --LRYYLGSAHYRSMLEFSETALQDAVKAYTGIEDFLHRVCSRVGSVPIGEWTPKFAAAL 356
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN---- 402
+DL+ A+ +H E + D A ILG + E
Sbjct: 357 NDDLSVPIALAEIHAARAEGNRALDSGDHQTAMQQASSIRAMMDILGCDPLNERWESRDA 416
Query: 403 -----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
K + + ++ + R + + +++AD IR +L+ G + D +
Sbjct: 417 TSAALKAVDVLVQWALASRAEARERRDWAAADAIRDRLKEAGIEVTDTADGPQWA 471
>gi|313680064|ref|YP_004057803.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
gi|313152779|gb|ADR36630.1| cysteinyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
Length = 482
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 166/504 (32%), Positives = 243/504 (48%), Gaps = 68/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+Y+T++RK EF P ++ +YVCGPTVY AH+G+ R +V+DVL R L +
Sbjct: 1 MPFYLYDTMQRKKVEFVPATPGHVGIYVCGPTVYSDAHLGHGRAAVVYDVLRRWLMHEGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V N+TD+ +DKI +RA+ E + K ++ +DT
Sbjct: 61 --RVRFVSNVTDVGHLTDDADEGEDKIAKRAKLEKLE------PMEVADKYFWRYFEDTD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L P+ PRA+ HI + I L + ++ G+AYE N + F + P+YG S R++++
Sbjct: 113 ALNVAKPSITPRASGHIIEQIELTKELLERGYAYEVNGSVYFRAAKWPDYGKLSGRRLED 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
Q+ G RV + K++P D+ LWKR+ P W SPWG G PGWHIECSAMS YLG+ F
Sbjct: 173 QQAGARVEVRGEKEDPRDWALWKRAEPGHLMRWPSPWGEGYPGWHIECSAMSLKYLGEGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+DL FPHHE EIAQ+ A A W+H+ + L G KM+KS GNFIT+ EL
Sbjct: 233 DIHAGGIDLQFPHHECEIAQAEAAGHA--FARYWMHHNHVLLNGEKMAKSTGNFITLREL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
LE + V+RL +L +HYR +D T L A + + S
Sbjct: 291 LEKHE-------PMVVRLYLLQSHYRSVLDLTDAGLEAAGRAYYRLLEAYRSLRSGLGRA 343
Query: 345 ------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
++ + A+ +DL T A+ AL E K + L
Sbjct: 344 REGTLTALEEAIDRLEGSFAEAMNDDLGTPEALAALFSFLPELNKALAAAQGRASLERAL 403
Query: 393 G-IEVCKEHLNKNISIAI-EKLVQ-------------ERLILLKMKKFSSADYIRKQLES 437
G +E E + + E ++ +R + F +AD IR +L
Sbjct: 404 GTLERLGEGVLGLFPPRVLEARLEGPLLEGLIELLLEQREAARSRRDFPAADAIRARLGE 463
Query: 438 KGFILEDYKNPDNGQRMTRWKQKP 461
G ++ED T+W+ P
Sbjct: 464 LGVVVEDT------PHGTKWRLAP 481
>gi|86138285|ref|ZP_01056859.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
gi|85824810|gb|EAQ45011.1| cysteinyl-tRNA synthetase [Roseobacter sp. MED193]
Length = 469
Score = 343 bits (881), Expect = 2e-92, Method: Composition-based stats.
Identities = 204/467 (43%), Positives = 270/467 (57%), Gaps = 23/467 (4%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
IK++NT RK +EF ID +N+RMY+CGPTVYD AH+GNARP++VFDVLYRLLR+ Y
Sbjct: 5 NPVIKLHNTKTRKKSEFTPIDANNVRMYLCGPTVYDRAHLGNARPVVVFDVLYRLLRHCY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSI---PINDAISIITSKNTQQFVKDTTRLACLA 118
G VTYVRN TD+DDKI A + + + ++ T + ++ D +L L
Sbjct: 65 GADHVTYVRNFTDVDDKINATALARKAAGAAGTLEELVAERTEETIGWYLSDMGKLGALE 124
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
P H PRAT +I QM+ +IQN+I GHAY ++F S NYG S R +D+ G
Sbjct: 125 PGHMPRATQYIRQMVTMIQNLIAKGHAYADGAGHVLFSVKSYENYGQLSGRSVDDMIAGA 184
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
RV +K++P DF+LWK ST PGW+SPWGRGRPGWHIECSAMS LG FDIH GG
Sbjct: 185 RVEVADNKRDPMDFVLWKPSTEELPGWDSPWGRGRPGWHIECSAMSQELLGATFDIHAGG 244
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENEIAQSCCA+ + A W+HN L +EG+KMSKS GNF T+++LL+
Sbjct: 245 NDLMFPHHENEIAQSCCANGDDSFARYWLHNEMLQVEGKKMSKSLGNFFTVHDLLD---- 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---IIDPAVLSA 354
+ P VIR L THYR+P+D+T ++ EAE L KW + AVL A
Sbjct: 301 --QGIPGEVIRFVFLQTHYRKPMDWTEKKAKEAEATLRKWRALTAGIEPAANAAAAVLDA 358
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE-----VCKEHLNKNISIAI 409
L +DLNT AI +HKLA ASA ++G+ + ++S
Sbjct: 359 LADDLNTAGAIAEMHKLAAAGDGPG-----LLASAQLMGLLSEALGDWAATPDLDLSAYA 413
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+L+ R ++ K FS D ++ + G + K R
Sbjct: 414 TQLLDARETAMQSKDFSQVDRLKAAFVAAGLEVRMSKAGVELVPGPR 460
>gi|326383076|ref|ZP_08204765.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326198212|gb|EGD55397.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 464
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 153/477 (32%), Positives = 233/477 (48%), Gaps = 46/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y++ R++ +F + P +Y+CG TV HIG+ R I FDVL R L Y
Sbjct: 1 MTLRLYDSATREVRDFVPLRPGTASVYLCGATVQGVPHIGHVRSGIAFDVLRRWLDYRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + + ++F + L L P+ +
Sbjct: 61 D--VLFVRNVTDIDDKILTKAAEAG------RPWWEWAATHEREFTRAYDALGVLPPSAE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT I QM+ +Q +I GHAY ++ + FD S+P YGS S ++++ G
Sbjct: 113 PRATGFITQMVEYMQRLIERGHAYSSDGNVYFDVRSLPEYGSLSGHRLEDVHQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ LG FDIH GG+DLIF
Sbjct: 173 --KRDPRDFTLWKAAKPGEPAWPTPWGDGRPGWHLECSAMATSLLGAEFDIHCGGMDLIF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A A W+HNG++ + G KMSKS GN + I +LE +
Sbjct: 231 PHHENEIAQSHGAGDG--FAQYWLHNGWVTMSGEKMSKSLGNVVAIPAMLERVRAVE--- 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
+R + HYR ++++ L EA + G ++ +
Sbjct: 286 ----LRYYLGSAHYRSMLEYSEGALAEAAAGYRRIESFVHRVADRVGRVDVGEVNDDFAA 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN-- 402
AL +DL +A+ A+H RE + + A +LG + H
Sbjct: 342 ALDDDLGVPAALAAVHNAVREGNTALEAGDGARALAIAAQVRAMTAVLGTDPLDPHWTAA 401
Query: 403 -------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + I+ + R K +++AD +R +L G + D +
Sbjct: 402 GADDEAHDALDVLIKAELDRRAQARAAKDWATADEVRDRLAEAGVEVTDTPDGAQWA 458
>gi|88855742|ref|ZP_01130405.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
gi|88815066|gb|EAR24925.1| cysteinyl-tRNA synthetase [marine actinobacterium PHSC20C1]
Length = 476
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 168/486 (34%), Positives = 235/486 (48%), Gaps = 50/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++Y+T + + + + + +YVCGPTV HIG+ R +V+D+ R L Y
Sbjct: 1 MTIRLYDTRSASLVDLKPREAGKVGIYVCGPTVQAAPHIGHLRSALVYDIWRRWLTYRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT VRN+TDIDDKI+ +A + + + +F L L PT++
Sbjct: 61 D--VTLVRNVTDIDDKILNQAVDAAAEGSA-EQWWALAYRIELEFTAGYNELGILPPTYE 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT +I +M LI ++I GHAY + + ++ FDT S P YG +R+K+D+
Sbjct: 118 PRATANISEMRELIASLIERGHAYAAADDSGDVYFDTQSWPTYGELTRQKLDDMVAAADA 177
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++ DF LWK S P EP W SPWG GRPGWHIECSAMS YLG FDIHGG
Sbjct: 178 DPR-AKRDSRDFALWKGSKPTEPTSASWSSPWGDGRPGWHIECSAMSRRYLGSGFDIHGG 236
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS + A W+HNG +N+ G+KMSKS GN + ELL+ +
Sbjct: 237 GLDLRFPHHENELAQSSALG--DDFAQHWVHNGMVNVNGQKMSKSLGNSVFARELLDAAR 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
V+R + HYR ID+T L EAE +
Sbjct: 295 -------PIVVRYLLGAAHYRSTIDYTDNSLAEAEAAFERLEVFIERATRRLRDTRFDVA 347
Query: 345 --GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILG 393
+ A A+ +DL A+ +H R D A A +LG
Sbjct: 348 NINEVPEAFGEAMDDDLAVPQALAVVHDTIRAGNAALDDGDLAAVATARSQVVAMAQVLG 407
Query: 394 IEVCKEHLNKN--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I +S +EKL+++R K F+ AD IR +L + G +ED
Sbjct: 408 INPLDPRWGSERSEPAVAALSALVEKLIEDRNTARSAKDFAVADRIRDELSAAGITVEDD 467
Query: 446 KNPDNG 451
+
Sbjct: 468 STGSHW 473
>gi|300775102|ref|ZP_07084965.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
gi|300506917|gb|EFK38052.1| cysteine--tRNA ligase [Chryseobacterium gleum ATCC 35910]
Length = 488
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 162/493 (32%), Positives = 235/493 (47%), Gaps = 54/493 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++KIYN+L + F+ I N+ MYVCGPTVY H+GN R + FD +YR L +
Sbjct: 1 MQLKIYNSLTAEKEIFKPILEGNVGMYVCGPTVYSNVHLGNVRTFLSFDFIYRTLMHLGY 60
Query: 63 EKCVTYVRNITD---------ID-DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD +D D+ +++ R E I K T F K
Sbjct: 61 --KVRYVRNITDAGHLTDDGNVDNDRFVKQTRLEKLE------PMEIVQKYTVDFHKVLD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRR 168
L P +P AT HI + I L Q +I G AYE+N + FD NYG S+R
Sbjct: 113 MFNLLPPNIEPTATGHIVEQIELTQKLIERGFAYESNGSVYFDVLEYNKRGLNYGELSKR 172
Query: 169 KIDEQKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
I+E TR + KKNP DF LWK+++P W SPWG G PGWH+EC+AMS+ Y
Sbjct: 173 NIEELFANTRDLDGQGEKKNPQDFALWKKASPAHIMRWNSPWGEGFPGWHLECTAMSTKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL FPHHE EIAQ + N W+H L + ++MSKS GN+I
Sbjct: 233 LGETFDIHGGGMDLKFPHHECEIAQGKACNDAAP-VNYWMHANMLTMNSQRMSKSTGNYI 291
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+L+ F + + ++R L HYR +D + + +E + +
Sbjct: 292 LPMQLVTGDNDFFEKPFHPSIVRFCFLQAHYRSVLDISNDAMIASEKGFIRLMEAVKVLN 351
Query: 346 IIDPAVLSAL---------------YNDLNTVSAIQALHKLAR------------ESTKN 378
I P +D N+ I L + + +
Sbjct: 352 SITPDDTKQSGFNLQEWKNKAYDALTDDFNSPILIAHLFEAVKYIFALNDGKETISTADL 411
Query: 379 HDLLPIFNAS-AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
DL NA +LG++ +E+ N+ + ++ L++ R K K F +D IR +L +
Sbjct: 412 EDLKTTLNAFIFDVLGLQTVEENNNEKLDQTLKVLIELRNQARKSKNFELSDQIRDKLLA 471
Query: 438 KGFILEDYKNPDN 450
+G L+D ++ +
Sbjct: 472 EGIELKDGRDGTS 484
>gi|163854141|ref|YP_001642184.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
gi|163665746|gb|ABY33113.1| cysteinyl-tRNA synthetase [Methylobacterium extorquens PA1]
Length = 462
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 206/482 (42%), Positives = 281/482 (58%), Gaps = 49/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFVPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG VTY RN+TD+DDKI RA + + I +T QF +D L L
Sbjct: 61 YGPAHVTYARNVTDVDDKINARALERGIT------IRELTDGTLAQFHRDIRDLGVLMAD 114
Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M LI+ ++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGEPARFIEPRATDHIAEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMESGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDLPGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GGLDLIFPHHENE+AQS C + A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGETFDIHAGGLDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTS 343
TI ++L+ WP V+RL ML THYR+PID+T++ L E+ +L +W +
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
+ V+ AL +DLNT +A+ LH+LA S A A ++G + +
Sbjct: 348 GAEVPEGVVEALCDDLNTPAALGELHRLAGTSPSA------LKAGAGLMGFLAVTQAQRE 401
Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+E L+ ER K ++++D +R L + G ++D K+ T
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTAMGVSVKDNKDGT-----T 456
Query: 456 RW 457
W
Sbjct: 457 TW 458
>gi|296126677|ref|YP_003633929.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
gi|296018493|gb|ADG71730.1| cysteinyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
Length = 472
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 257/493 (52%), Gaps = 55/493 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+I +YN+L R+ F+ I + MY CGPTVY++AHIGN R + D+L R+L Y
Sbjct: 1 MKEIVLYNSLTREKEVFKPIKEGEVGMYSCGPTVYNYAHIGNFRAYVFSDLLRRVLEDYG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V V N+TD+DDK I+ +++ H S+ + T K + F +D L +
Sbjct: 61 Y--NVKLVMNLTDVDDKTIKNSKENHISL------NEYTKKYKEAFFEDIKTLGIKKASV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK---IDEQKMGTR 178
P AT+HI +MI +I+ + +GH YEA+ + F S+ P YG + + E G
Sbjct: 113 NPAATDHIKEMIDIIELLKKNGHTYEADGSVYFKISTFPQYGELANLDKQELLEGASGRV 172
Query: 179 VPEKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ ++Y K+N +DF+LWK T + W+SP+G+GRPGWHIECSAMS YLGK FDIH G
Sbjct: 173 LNDEYDKENASDFVLWKAYTEEDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D FPHHENEIAQ+ A EK N W+H L ++G KMSKS GNF T+ +LL+
Sbjct: 233 GVDNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLD--- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
+ IR +++ +HYR+ ++FT++ + +++ + + I+ + +
Sbjct: 289 ---KGLSKEAIRYSLINSHYRKQLNFTIEGIKQSQSAIDRVNDFVFRLKDINKTDTNEIN 345
Query: 357 -------------------NDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
NDLN A+ L L + + + D ++
Sbjct: 346 DKLSKEIDEANDKFSDSVYNDLNISEALGVLFTLIKNANTSFDSINNETRDKMIKFIERV 405
Query: 389 AHILG-IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+I+ ++ E NK+ I KL++ER + K K + AD IR +L S G + D
Sbjct: 406 NNIINCFKINDEEENKDDEEEINKLIEERSLAKKEKNYQKADEIRNKLLSMGIEIMDT-- 463
Query: 448 PDNGQRMTRWKQK 460
+ +WK+K
Sbjct: 464 ----PQGVKWKRK 472
>gi|297816954|ref|XP_002876360.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297322198|gb|EFH52619.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 485
Score = 343 bits (881), Expect = 3e-92, Method: Composition-based stats.
Identities = 165/496 (33%), Positives = 240/496 (48%), Gaps = 64/496 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++ +YNT+ + F+ I+P I MYVCG T YD++HIG+AR + FD+LYR LR+
Sbjct: 5 KPELTLYNTMTQLKEVFKPINPGKIGMYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YVRN TD+DDK + + ++++ ++++ D T L CL PT
Sbjct: 65 YE--VHYVRNFTDVDDK----------AKKCGEKPLDLSNRFCEEYLLDMTALQCLIPTR 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR ++H+ +I +I+ II +G Y ++ F P+YG S +++D + G RV
Sbjct: 113 QPRVSDHMEHIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LW + EP WESPWG GRPGWHIECSAMS+HYL FDIHGGG DL
Sbjct: 173 DSRKRNPADFALWNAAKSGEPSWESPWGPGRPGWHIECSAMSAHYLSPRFDIHGGGADLK 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+C A + N W+HNG + KM KS NF TI E+
Sbjct: 233 FPHHENEIAQTCAAC-EDSGVNYWLHNGHVTNNNVKMGKSLDNFFTIREITA-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
+ +R ++ YR P++++V +L + L QT + D+
Sbjct: 285 YHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYCAYQTLEDLVKYLSPYREEMSGDVGK 344
Query: 362 VSAIQALHKLARESTKNH--------------------------DLLPIFNASAHILGI- 394
++ ++ ++ +LG+
Sbjct: 345 TQQTAEAKEMIKKVKNALKFINVSISKLKKIQKKQRMSLIVSLVEVEKAVREVLDVLGLL 404
Query: 395 ------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
E KE K + + + + ER + K K F +D IR+ L +KG L
Sbjct: 405 TTLSYDEFLKEMKQKALTRAGIGEEEVLRRIDERKLARKNKDFKRSDQIRELLAAKGIAL 464
Query: 443 EDYKNPDNGQRMTRWK 458
ED D T W+
Sbjct: 465 EDIPGKD-----TVWR 475
>gi|119960845|ref|YP_946695.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|166200128|sp|A1R383|SYC_ARTAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119947704|gb|ABM06615.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
Length = 484
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 163/491 (33%), Positives = 236/491 (48%), Gaps = 54/491 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T ++ +F ++ +Y CG TV H+G+ R I FD L R L +
Sbjct: 1 MTLRFYDTASAEVRDFVPLEDGKASVYYCGATVQGMPHVGHVRSAIAFDQLTRWLEFRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQ-------EHPSIPINDAISIITSKNTQQFVKDTTRLA 115
VT VRN+TDIDDKI+ ++ Q PS + + + Q+F L
Sbjct: 60 -LRVTVVRNVTDIDDKILAKSAQSFGPDWDAEPSARQTEEWWALAYRYEQEFENAYESLG 118
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDE 172
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YGS +R+ ID+
Sbjct: 119 VQRPTYEPRATGHIPEMHTLIQRLIDRGHAYPALDDSGDVYFDVRSWSKYGSLTRQNIDD 178
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + K++P DF LWK EP WESPWG GRPGWH+ECSAM + YLG
Sbjct: 179 MQGAPDADPR-GKRDPRDFALWKGFKDGEPVTAKWESPWGAGRPGWHLECSAMVTKYLGP 237
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGGLDL FPHHENE+AQS A ++ AN W+HNG + EG KMSKS GN ++
Sbjct: 238 RFDIHGGGLDLRFPHHENEMAQSQAAG--DEFANFWMHNGMVTYEGEKMSKSIGNTVSPA 295
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
E+LE V+R + HYR +D+ L EA + +
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFIHKASSKVG 348
Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFN 386
+ A ++A+ +DLN A+ LH+ R L
Sbjct: 349 TGAPDVSPQANMPAAFIAAMDDDLNVPQALGVLHETVRAGNTALASGDLEGAKAALYSVL 408
Query: 387 ASAHILGIEVCKEHLN------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ +LG++ K + + IE ++ R K ++++D IR L + G
Sbjct: 409 SMTEVLGLDSVKRPEAVQGREHAALEVLIEAQLEARAAARANKDWAASDAIRDTLAAAGV 468
Query: 441 ILEDYKNPDNG 451
++ED +
Sbjct: 469 VVEDGADGATW 479
>gi|68535378|ref|YP_250083.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
gi|109894894|sp|Q4JXJ2|SYC_CORJK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|68262977|emb|CAI36465.1| cysS3 [Corynebacterium jeikeium K411]
Length = 478
Score = 343 bits (880), Expect = 3e-92, Method: Composition-based stats.
Identities = 151/493 (30%), Positives = 236/493 (47%), Gaps = 63/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IY+T R++ +F+ I + +Y+CG TV HIG+ R + FD+L L
Sbjct: 1 MTLRIYDTAARQLRDFEPIREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLEAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ +A + + + + + F +L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILTKAAEN------DRPWWEWAATHERAFNWAYDQLGVTPPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+PQMI +Q II +GH Y A+ + ++I NYG S +K+DE G
Sbjct: 113 PRATGHVPQMIEYMQRIIDNGHGYAADGNVYAQPATIDNYGFLSGQKLDEMDQGESAGTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG FDIH GGLDL F
Sbjct: 173 --KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGSEFDIHCGGLDLQF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQ+ A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 231 PHHENEAAQATAAGDG--FARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------G 345
+R + HYR ++++ L EA + + G
Sbjct: 283 -PVELRYYLGSAHYRSMLEYSEAALGEAAAGYRRIEKFLVRAIEYVTGETAVDPQALPVG 341
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHIL 392
+ + +DL ++ +H + RE K D P A A +L
Sbjct: 342 EMPAQFAEKMDDDLAVPQSLAVIHDVVREGNKLLDAKPTDEAKQQVKEIAGQVRAMAAVL 401
Query: 393 GIEVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
G++ E + + + ++ ++ R K +++AD +R +L
Sbjct: 402 GVDPLSEAWLESTKAAAGGSDVAMGALDVLVKAELERRAEARAAKDWATADEVRDRLAEA 461
Query: 439 GFILEDYKNPDNG 451
G + D +
Sbjct: 462 GIEVTDTADGAKW 474
>gi|258655032|ref|YP_003204188.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
gi|258558257|gb|ACV81199.1| cysteinyl-tRNA synthetase [Nakamurella multipartita DSM 44233]
Length = 473
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 164/483 (33%), Positives = 239/483 (49%), Gaps = 51/483 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPM-IVFDVLYRLLRY 59
M + + +Y+T R + F+ + P + +Y CG TV HIG+ R IV+DVL R L +
Sbjct: 1 MSQSLHLYDTATRSVRPFEPLQPGVVSLYNCGATVQWHPHIGHLRGAGIVYDVLRRWLEF 60
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
E V +VRN+TDIDDKI+ +A + + + + F L CL P
Sbjct: 61 TGYE--VRHVRNVTDIDDKILTKAAEAG------RPWWEWATTHERSFDDAYDTLGCLRP 112
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+ +PRAT HIPQ++ +I +I GHAY A ++ F + P+YG S ++IDE G
Sbjct: 113 SVEPRATGHIPQILEMIAALIEAGHAYAAAGDVYFAVRTQPDYGFLSGQRIDEMVQGETE 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++PADF LWK + P EP W+SPWGRGRPGWHIECSAM+ YLG FDIHGGGLD
Sbjct: 173 AGG--KRDPADFTLWKAAKPGEPSWDSPWGRGRPGWHIECSAMARAYLGTEFDIHGGGLD 230
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS + A W+H+ ++ + G KMSKS GN +++ + E +
Sbjct: 231 LIFPHHENEAAQSHGLG--DVFARYWMHSHWVTMAGEKMSKSLGNILSVPTITEKVR--- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GI 346
+R ++ HYR I+++ + L +A + G
Sbjct: 286 ----PVALRYYLISVHYRSSIEYSQEALDDAAKAYERIEAFLHRAADRAGAGADGVPIGE 341
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVC 397
+ A A+ +DL A+ +H+ R +L A +LG++
Sbjct: 342 VPDAFRQAMNDDLGVPRALAVVHEKVRAGNAALARSDDDAAQELASSVRAMVAVLGLDPW 401
Query: 398 KEHL--NKNISIAIEK-------LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
K +E L+ ER + F+ AD IR Q+ + GF +ED K+
Sbjct: 402 AAPWVERKVDRRLVEATGRLLDGLLAERAQARADRDFARADEIRTQVAAAGFAIEDTKDG 461
Query: 449 DNG 451
Sbjct: 462 PVW 464
>gi|297735988|emb|CBI23962.3| unnamed protein product [Vitis vinifera]
Length = 513
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 179/514 (34%), Positives = 259/514 (50%), Gaps = 81/514 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNT+ ++ + + + MYVCG T YD +H+G+ R + FDVLYR L++ E
Sbjct: 6 ELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYE 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN TD+DDKII RA + + + ++S Q+++ D T L CL+PTHQP
Sbjct: 66 --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSHFCQEYLDDMTDLHCLSPTHQP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++H+ Q+ +I II + AY + ++ F PNYG S RK++ + G RV
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDS 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSC A E + W+HNG + KMSKS GNF TI ++ + +
Sbjct: 238 HHENEIAQSCAAC-QESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
+R +L THYR P+++++ +L A + QT
Sbjct: 290 PLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCIAP 349
Query: 347 --------IDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLL--------------- 382
+ + + +DL+T + +L + R ++L
Sbjct: 350 AAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVES 409
Query: 383 -----PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKK 424
+LG+ EV ++ K + + L++ER + K K
Sbjct: 410 LTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKD 469
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
FS D IR L SKG L D + T W+
Sbjct: 470 FSKGDQIRADLASKGIALMD------VGKETIWR 497
>gi|283458741|ref|YP_003363379.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
gi|283134794|dbj|BAI65559.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
Length = 472
Score = 343 bits (879), Expect = 4e-92, Method: Composition-based stats.
Identities = 161/484 (33%), Positives = 238/484 (49%), Gaps = 44/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y++ I EF+ + P R+Y CG TV H+G+ R +VFD L R +RY
Sbjct: 1 MTMRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQE----HPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
VT VRN+TDIDDKI+ ++ + N+ + + + F + L
Sbjct: 60 -LKVTTVRNVTDIDDKILAKSAESMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDP 118
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YG+ + + +++ +
Sbjct: 119 PTYEPRATGHIPEMFALIQRLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQD 178
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK EP WESPWGRGRPGWH+ECSAM+ YLG FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFD 237
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A + AN W+HNG + EG KMSKS GN I+ ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPAQML 295
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------- 345
+ + V+R + HYR +D+ L EA + + +
Sbjct: 296 QMAR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAAAQDVLKPGR 348
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHILGI---- 394
+ A A+ +D+N A+ LH+ R + A A +LG+
Sbjct: 349 EVPEAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLM 408
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E ++ + I+ ++ ER K ++ AD +R L S G ++D N +
Sbjct: 409 SFNAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGANGSS 468
Query: 451 GQRM 454
Sbjct: 469 WSVG 472
>gi|221639139|ref|YP_002525401.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
gi|254781691|sp|B9KRV8|SYC_RHOSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|221159920|gb|ACM00900.1| Cysteinyl-tRNA synthetase [Rhodobacter sphaeroides KD131]
Length = 519
Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats.
Identities = 189/512 (36%), Positives = 264/512 (51%), Gaps = 60/512 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R+ F+ ID N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3 EIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A + + I T + + + +D L L PT
Sbjct: 63 GHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT I MI +I+++I GHAYE ++F S +YG+ S R +D+ G RV
Sbjct: 123 QEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFDI 233
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAM+ L K FDI
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENERSFDI 242
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
H GG+DL FPHHENEIAQS CA + A +W+HN L ++G+KMSKS GNF T+ EL+E
Sbjct: 243 HAGGIDLQFPHHENEIAQSRCAHPEGEFAKVWMHNEMLLVDGKKMSKSLGNFFTVRELIE 302
Query: 294 TKKFGGRSWP-APVIRLAMLMTHYREPIDFTVQRLTEAEI---LLSKWPQTSTSKGIIDP 349
+ P IRL L HYR PID + +A + L + I D
Sbjct: 303 EYRKQFAVNNIGPAIRLRFLQGHYRAPIDAARHYIEQASVKLGLWWHFISEHLDAPITDK 362
Query: 350 AV---------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA------------- 387
+ AL +DLNT A+ + L +A
Sbjct: 363 DRRDILATSPVIEALADDLNTPLAVTYIDGLVSRLRGGIQKQGYVDAEMDDLEMVAKRAR 422
Query: 388 -SAHILGIEVCKEH-----------------LNKNISIAIEKLVQERLILLKMKKFSSAD 429
+ LG + ++ + I +L++ER K + F+ +D
Sbjct: 423 VAIEFLGFTFDDLEEHHGPVQLKRLKERQLSASADVGVRIGRLLEERAEARKARDFARSD 482
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
IR +L++ G +++D ++ W+ +P
Sbjct: 483 AIRDRLQAAGVLIKDSRDGA------TWELEP 508
>gi|269123413|ref|YP_003305990.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
gi|268314739|gb|ACZ01113.1| cysteinyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
Length = 457
Score = 343 bits (879), Expect = 5e-92, Method: Composition-based stats.
Identities = 172/470 (36%), Positives = 257/470 (54%), Gaps = 43/470 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYN+L K+ EF I+ + +YVCGPTVY++ H GN+RP+IVFD L R E
Sbjct: 1 MKIYNSLNNKLEEFIPINDKKVGIYVCGPTVYNYIHFGNSRPVIVFDTLARHFINQGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V++V+N TDIDDKII ++ +E N I+ K F++D ++L L +P+
Sbjct: 60 -VSFVQNFTDIDDKIINKSIEE------NIPFEEISKKYINAFMEDISKLNILDIVKRPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ +IP +I +I+ +I +G+AYE + +++F + YG S +K+ + +G R+ +
Sbjct: 113 VSEYIPDIIEMIEVLIYNGYAYERDGDVLFRVNKYLEYGKLSNQKLSDLSVGVRINKDEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ EP W +P+ GRPGWHIECSAMS LG FDIH GG+DL+FPH
Sbjct: 173 KENPLDFVLWKKKKENEPYWNAPFSEGRPGWHIECSAMSRKLLGDNFDIHAGGIDLLFPH 232
Query: 245 HENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HENE AQS C + AN W+HNGFL + G KMSKS GNFIT+ E+L +
Sbjct: 233 HENERAQSVCFCNEKSSFANYWMHNGFLEVNGEKMSKSLGNFITLREIL-------NDYS 285
Query: 304 APVIRLAMLMTHYREPIDFTVQRLT----------EAEILLSKWPQTSTSKGIIDPAVLS 353
V+R ML THYR+PI+++++ L + + T+ S I ++
Sbjct: 286 GDVVRFFMLSTHYRKPINYSIENLEISKKTLNSIIDTIDRYKQIDVTNNSNNEIKKDIIE 345
Query: 354 AL-------YNDLNTVSAIQALHKLARESTKNHD---------LLPIF-NASAHILGIEV 396
+DLNT AI +H L +++ K + ++ I ++LGI++
Sbjct: 346 FELAINSALNDDLNTPLAISCIHDLIKKTNKYLNSSIFREITLVVEILEKYIINVLGIKM 405
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
K + IE L + R K ++ +D IR +L G D K
Sbjct: 406 EKNKNDMLSESLIELLNKIREDARMNKNYALSDMIRDELLKLGIKTVDGK 455
>gi|183985048|ref|YP_001853339.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
gi|229558716|sp|B2HJ21|SYC_MYCMM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|183178374|gb|ACC43484.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium marinum M]
Length = 468
Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats.
Identities = 150/477 (31%), Positives = 228/477 (47%), Gaps = 46/477 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 7 LRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARGFD- 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 66 -VAFIRNVTDIDDKILNKAAA------AERPWWEWAATYERAFTAAYDALDVLPPSAEPR 118
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+ QM+ LI+ +I GHAY ++ FD S P+YG S K+D+ G V
Sbjct: 119 ATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVATG-- 176
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DLIFPH
Sbjct: 177 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDLIFPH 236
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 237 HENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQRVR-------P 287
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVLSAL 355
+R + HYR ++F+ L E + + G P +AL
Sbjct: 288 AELRYYLGSAHYRSMLEFSDIALQDAVNAYVGVEEFLHRVRSRAGVVVVGDWTPRFAAAL 347
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK--- 403
+DL+ A+ +H E + D A ILG + E
Sbjct: 348 DDDLSVPIALAEIHHTRAEGNRALDAGDHDAALQSASSIRAMMGILGCDPLDERWESRDE 407
Query: 404 ------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ ++ R + + ++ AD IR +L++ G + D +
Sbjct: 408 TSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTADGPQWLLG 464
>gi|221194861|ref|ZP_03567918.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
gi|221185765|gb|EEE18155.1| cysteinyl-tRNA synthetase [Atopobium rimae ATCC 49626]
Length = 513
Score = 342 bits (878), Expect = 5e-92, Method: Composition-based stats.
Identities = 170/521 (32%), Positives = 237/521 (45%), Gaps = 91/521 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT + F ID +RMYVCGPTVYD HIGNAR + FDV+ R L + E
Sbjct: 1 MLVYNTQTHRKETFTPIDEGKVRMYVCGPTVYDQIHIGNARTFLSFDVIRRYLMHAGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ +N+TD+DDKII RA ++ + + + + F++ R L P +PR
Sbjct: 60 -VTFAQNLTDVDDKIINRALEQGRTA------QEVAEEYSSAFIEQMHRFNILDPDIRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+ I M+ +IQ++I G AY + ++ F + NYG S R +D+ + G RV
Sbjct: 113 ATHEINAMVEMIQSLIDQGFAYAVPSGDVYFSVRADHNYGVLSGRDLDQLRAGERVEVNT 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W SPWG GRPGWH EC AM YLG DIHGGG DL+FP
Sbjct: 173 EKRDPFDFALWKTAKPGEPSWPSPWGEGRPGWHSECCAMIHRYLGTPIDIHGGGADLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ C E AN W+H G L +EG KMSKS GNF T+ E+L++ +
Sbjct: 233 HHENETAQASCCWH-EPLANYWMHAGMLRVEGEKMSKSLGNFYTLKEVLDS-------YS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------------- 344
A +RL ML THYR +DF+ +RL A L + +
Sbjct: 285 ADAVRLLMLQTHYRASLDFSFERLDGAIGTLERMKTCVANLRWAAKNAQSTERSADAGRS 344
Query: 345 -----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD- 380
G ++ +D NT A+ A+ L +
Sbjct: 345 ANTGDATQDHKQSDRENELTSAIGTACENFERSMADDFNTAEALAAMFTLVTAANTYLAD 404
Query: 381 ------------LLPIFNASAHILGIEVCKEHLNKNISIAI------------------- 409
+LGI V + + + +
Sbjct: 405 AADAINAKLTLHAADTLTELFGVLGISVNTDKASDELPHELIDLAKSQAGYEGESVTQAA 464
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E L+ R K + AD IR + G ++ED +
Sbjct: 465 EALLSARQNARAEKNWVVADAIRDGIAGLGLLIEDTASGAR 505
>gi|118466391|ref|YP_879853.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
gi|254773531|ref|ZP_05215047.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
25291]
gi|166200182|sp|A0QAB5|SYC_MYCA1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118167678|gb|ABK68575.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
Length = 468
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 150/480 (31%), Positives = 227/480 (47%), Gaps = 46/480 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L
Sbjct: 4 RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V ++RN+TDIDDKI+ +A + + F L L P+
Sbjct: 64 YD--VAFIRNVTDIDDKILNKAAAAG------RPWWEWAATYERAFSAAYDALDVLPPSA 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT HI QM+ LI+ +I GHAY + ++ FD S P YG S +ID+ G V
Sbjct: 116 EPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGV-- 173
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK + P EP W +PWGRGRPGWH EC AM+ YLG FDIH GG+DL+
Sbjct: 174 ASGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDLV 233
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR----- 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVL 352
+R + HYR ++F+ L E + + + G P
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHRVRVRVGAVEPGEPTPRFA 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
AL +DL +A+ +H+ E + D A ILG + E
Sbjct: 345 DALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHERWET 404
Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + + +Q R + + ++ AD IR +L+ G + D +
Sbjct: 405 RDESSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTADGPQWTLG 464
>gi|41406576|ref|NP_959412.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|61216572|sp|Q743W3|SYC_MYCPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|41394925|gb|AAS02795.1| CysS [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 468
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 150/480 (31%), Positives = 228/480 (47%), Gaps = 46/480 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L
Sbjct: 4 RPRLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIALG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V ++RN+TDIDDKI+ +A + + F L L P+
Sbjct: 64 YD--VAFIRNVTDIDDKILNKAAAAG------RPWWEWAATYERAFSAAYDALDVLPPSA 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT HI QM+ LI+ +I GHAY + ++ FD S P YG S +ID+ G V
Sbjct: 116 EPRATGHITQMVELIERLIEKGHAYTGDGDVYFDVLSYPEYGQLSGHRIDDVHQGEGV-- 173
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ DF LWK + P EP W +PWGRGRPGWH EC AM+ YLG FDIH GG+DL+
Sbjct: 174 ASGKRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMAHEYLGPEFDIHCGGMDLV 233
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 234 FPHHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR----- 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVL 352
+R + HYR ++F+ L E + + + G +P
Sbjct: 287 --PAELRYYLGSAHYRSMLEFSDTALQDAVKAYVGVEEFLHRVRVRVGAVEPGEPNPRFA 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN- 402
AL +DL +A+ +H+ E + D A ILG + E
Sbjct: 345 DALNDDLAVPAALAEVHQARAEGNRALDSGDHEGALRQARSIRAMMGILGCDPLHERWET 404
Query: 403 --------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + + +Q R + + ++ AD IR +L+ G + D +
Sbjct: 405 RDETSAALAAVDVLVRAELQNREKAREQRNWALADEIRNRLKQAGIEVTDTADGPQWTLG 464
>gi|256827720|ref|YP_003151679.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
gi|256583863|gb|ACU94997.1| cysteinyl-tRNA synthetase [Cryptobacterium curtum DSM 15641]
Length = 499
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 181/510 (35%), Positives = 250/510 (49%), Gaps = 79/510 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYNT RK +F+ I+ +RMYVCGPTVY++ HIGNAR + FD++ R L + +
Sbjct: 1 MIRIYNTQTRKKEDFKTIEVGRVRMYVCGPTVYNYIHIGNARTFVSFDIVRRYLMWRGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N+TD+DDKII+RA +E + I K T F++D + L P +P
Sbjct: 61 --VTFVQNVTDVDDKIIKRAGEEECDA------AEIARKYTDAFIEDMHAMGVLDPDKRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-------DEQKMG 176
RAT IP+MI L+Q +I GHAYEA ++ F S P YG S R I + +
Sbjct: 113 RATEEIPEMIELVQRLIDTGHAYEAAGDVYFSVRSFPAYGHLSHRDIDELESGHRDLRAS 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF +WK + P EP W+SPWG+GRPGWHIECSAMS YLG FD+HGG
Sbjct: 173 HVEGIGDRKRDPLDFAIWKAAKPGEPSWKSPWGQGRPGWHIECSAMSRKYLGLPFDVHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHENE AQS A E N W+H+G L + KMSKS GNF+ + ++L
Sbjct: 233 GADLIFPHHENETAQSEAAWG-ETFTNYWMHSGMLQINAEKMSKSLGNFLLLRDVL---- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------KWPQTSTSKGIID- 348
+S +R+ ML THYR P+DF+ +RLTEA L+ + T+ I
Sbjct: 288 ---KSVNPRSLRMLMLQTHYRSPLDFSEERLTEAAAALARIEALVARLDWAITNAADIPS 344
Query: 349 ---------------PAVLSALYNDLNTVSAIQALHKLARESTKN--------------H 379
+ A+ +D NT A+ A+ L +
Sbjct: 345 PLKAKELLAQVQQTRNEFIYAMDDDFNTAGALGAIFTLVGDLNTQLGDATVSRSDIPVLR 404
Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL--------IL-----------L 420
+ GIEV ++ + L E
Sbjct: 405 QARESIVELMGVFGIEVVQQPSESGYPAQVVDLAAELAGFAGTSPSDAVDALLGARAAAR 464
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ K F+ AD +R ++ GF +ED
Sbjct: 465 QAKNFALADAVRDRMSDLGFTIEDTPQGAR 494
>gi|269796450|ref|YP_003315905.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
gi|269098635|gb|ACZ23071.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
Length = 477
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 150/484 (30%), Positives = 238/484 (49%), Gaps = 51/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + + +YVCG TV HIG+ R + FDVL R L
Sbjct: 1 MSLRLYDTATRDVRDFVPLVEGEVGVYVCGATVQGLPHIGHMRSAVAFDVLARWLARTG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ ++ + + + + F L L PT++
Sbjct: 60 -HRVTLVRNVTDIDDKILAKSAAAG------EPWWAWAATHERAFTHAYDALGNLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+ M+ L++ ++ GHAY+A ++ FD S YGS + +++++ T +
Sbjct: 113 PRATGHVTDMVALMERLVAAGHAYQAGEGDVYFDVRSWEPYGSLTNQRLEDLTPATEEVD 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
KK+P DF LWK + P EP W +P+GRGRPGWH+ECSAM+ YLG FDIHGGGL
Sbjct: 173 AGVKKDPRDFALWKAAKPGEPETASWPTPFGRGRPGWHLECSAMAQRYLGDTFDIHGGGL 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A +W+H+ ++ G KMSKS GN + + E+L+ +
Sbjct: 233 DLRFPHHENEQAQSRAAGY--DFARLWMHSAWVTQGGAKMSKSLGNGLLVTEVLDRTR-- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSK 344
A V+R A+ HYR +++T + + EA+ ++ P
Sbjct: 289 -----AAVLRFALAGVHYRSMLEWTAETVAEADTTWDRFVGFVDRATERVGTVPAEEVVA 343
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIE 395
+ ++A+ +DLN +A+ A+H+ + L + + +LG++
Sbjct: 344 AALPAGFVAAMDDDLNVSAALAAVHEHLKAGNTALAGGDDAAARTELVLVRSMLDVLGLD 403
Query: 396 VCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + ++ R K F+++D IR +L G ++ED
Sbjct: 404 PAAWSTSSTSTSSTTALDALVTCELEARAQARAAKDFATSDAIRDRLARAGIVVEDSTLG 463
Query: 449 DNGQ 452
Sbjct: 464 ARWT 467
>gi|118619335|ref|YP_907667.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|166225300|sp|A0PV27|SYC_MYCUA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118571445|gb|ABL06196.1| cysteinyl-tRNA synthetase 1 CysS1 [Mycobacterium ulcerans Agy99]
Length = 468
Score = 342 bits (878), Expect = 6e-92, Method: Composition-based stats.
Identities = 150/477 (31%), Positives = 230/477 (48%), Gaps = 46/477 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 7 LRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARGFD- 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 66 -VAFIRNVTDIDDKILNKAAA------AERPWWEWAATYERAFTAAYDALDVLPPSAEPR 118
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+ QM+ LI+ +I GHAY ++ FD S P+YG S K+D+ G V
Sbjct: 119 ATGHVTQMVELIERLIERGHAYAGGGDVYFDVLSYPDYGQLSGHKVDDVHQGEGVATG-- 176
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DLIFPH
Sbjct: 177 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAQFDIHCGGMDLIFPH 236
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 237 HENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPTMLQRVR-------P 287
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVLSAL 355
+R + HYR ++F+ L E + + + G P +AL
Sbjct: 288 AELRYYLGSAHYRSILEFSDIALQDAVNAYVGVEEFLHRVRSRVGAVVVGDWTPRFAAAL 347
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK--- 403
+DL+ A+ +H + E + D A ILG + E
Sbjct: 348 DDDLSVPIALAEIHHIRAEGNRALDAGDHDAALQSASSIRALMGILGCDPLDERWESRDE 407
Query: 404 ------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ + ++ ++ R + + ++ AD IR +L++ G + D +
Sbjct: 408 TSAALAAVDVLVQAELENRQKAREERNWALADEIRNRLKNAGIEVTDTADGPQWLLG 464
>gi|11498023|ref|NP_069247.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
gi|3122884|sp|O29836|SYC_ARCFU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|2650218|gb|AAB90823.1| cysteinyl-tRNA synthetase (cysS) [Archaeoglobus fulgidus DSM 4304]
Length = 467
Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats.
Identities = 173/491 (35%), Positives = 246/491 (50%), Gaps = 59/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL RKI + + I ++MYVCG T YD++HIG+AR + FDV R L Y E
Sbjct: 1 MEVYNTLSRKIEKLEDIVDGKRVKMYVCGITAYDYSHIGHARSAVFFDVFRRYLEYLGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TD+DDKII RA +E + + K ++++KD L PT+QP
Sbjct: 61 --VVYVQNFTDVDDKIINRAVKEGKTQ------KEVAEKFIEEYLKDMEALNVKKPTYQP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T HIP +I IQN+I G+AY + ++ F + +YG S++ ++E R+
Sbjct: 113 KVTEHIPDIIEFIQNLIEKGYAYVIDGDVYFHVPAFEHYGELSKQSLEELN-RHRIEPDE 171
Query: 184 HKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++ DF LWK + + ++SPWGRGRPGWHIECS MS+ YLG FDIHGGG D
Sbjct: 172 RKRDVKDFALWKSAKEADLKAQAVFDSPWGRGRPGWHIECSVMSAKYLGVPFDIHGGGKD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS +E IW+HN F+ ++G KMSKS GN + I ++L
Sbjct: 232 LIFPHHENERAQSFARFGVEP-VKIWVHNDFIRIKGEKMSKSLGNIVRIRDVL------- 283
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
+ + V+R +L HYR P+D+T + L A+ +
Sbjct: 284 QRYEGEVLRYFLLTAHYRSPLDYTEEALERAKRAYEYLRSALINLDMEIAYLKTFGDRKE 343
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASA 389
A+ DL+T AI LH+ A K +L F
Sbjct: 344 GNQVDVEDYIRRFEEAMNRDLHTPDAIAVLHEFAGLINKSLYELSLNQAEELYEAFKRLC 403
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ E + EK+V ER K + F AD IR + +G L D
Sbjct: 404 GVLGLFEKMERVPALSREDAEKVV-ERERARKERNFELADAIRDEFAKRGIRLIDT---- 458
Query: 450 NGQRMTRWKQK 460
+ TRW+ +
Sbjct: 459 --PKGTRWRVE 467
>gi|307706127|ref|ZP_07642946.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
gi|307618527|gb|EFN97675.1| cysteinyl-tRNA synthetase [Streptococcus mitis SK321]
Length = 423
Score = 342 bits (877), Expect = 7e-92, Method: Composition-based stats.
Identities = 148/442 (33%), Positives = 220/442 (49%), Gaps = 36/442 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ H+GNAR + FD + R Y E V Y+ N TD+DDKII RA++E
Sbjct: 1 MYVCGPTVYNYIHVGNARSTVAFDTIRRYFEYRGFE--VAYISNFTDVDDKIINRAKEEG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + K F +D T L T PR + +I ++++I G AYE
Sbjct: 59 IT------PQEVADKYIAAFREDVTALGVKPATRHPRVVEFMADIIRFVEDLIGKGFAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGW 204
+ ++ F NY + + +++ ++G + + LWK + E W
Sbjct: 113 SQGDVYFRVEKSHNYAKLANKTLEDLELGASGRTDEETARKENPVDFALWKAAKSGEISW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+SPWG GRPGWHIECS MS+ LG DIHGGG DL FPHH NEIAQS + AN
Sbjct: 173 DSPWGPGRPGWHIECSVMSTEILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANY 231
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+HNGF+N++ KMSKS GNFIT+++ L ++ V+R HYR+PI+FT
Sbjct: 232 WMHNGFVNIDNVKMSKSLGNFITVHDAL-------KTLDGQVLRFFFATQHYRKPINFTE 284
Query: 325 QRLTEAEILLSKWPQTSTS----------KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ + +AE L T ++A+ D N + I + ++A+
Sbjct: 285 KAVRDAETNLKYLKNTYEQPFTGTVDAQELQAFKDKFVAAMDEDFNAANGITVVFEMAKW 344
Query: 375 STK---NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ + + GI +E + + IE L+Q+R + F++AD+I
Sbjct: 345 INSGNYDASVKEALADMLEVFGIVFVEE----VLDVEIEDLIQKRQEARANRDFTTADHI 400
Query: 432 RKQLESKGFILEDYKNPDNGQR 453
R QL ++G L D K+ R
Sbjct: 401 RDQLAAQGIKLLDTKDGVRWTR 422
>gi|148273671|ref|YP_001223232.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|166200144|sp|A5CTY3|SYC_CLAM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|147831601|emb|CAN02569.1| cysS1 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 484
Score = 342 bits (877), Expect = 8e-92, Method: Composition-based stats.
Identities = 155/492 (31%), Positives = 238/492 (48%), Gaps = 56/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++ + + +F + + +YVCGPTV HIG+ R + +D L R L +
Sbjct: 1 MTLRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLTHRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT VRN+TDIDDK+I+ AR+ + + + +F + + L L P+++
Sbjct: 61 D--VTLVRNVTDIDDKVIDNARR-GQEAGGTEEWWALAYRVELEFSRAYSALGILPPSYE 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT I +M +I+ ++ GHAY + + ++ FDT+S P YG +R++ + +
Sbjct: 118 PRATASIGEMQEIIRRLVERGHAYAADDRSGDVYFDTASWPEYGELTRQRAADMEAAADA 177
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++ DF LWK + P EP W SPWG GRPGWHIECSAMS+ YLG FDIHGG
Sbjct: 178 DPRA-KRDVRDFALWKGAKPGEPASASWPSPWGSGRPGWHIECSAMSTRYLGAEFDIHGG 236
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A + A W+HNG + + G+KMSKS GN + +LL + +
Sbjct: 237 GLDLRFPHHENELAQSRAAG--DPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
V+R + HYR ++F L EAE L +
Sbjct: 295 -------PVVVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTRFQAA 347
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
+ A+ +DL+ A+ LH R D L +A
Sbjct: 348 PAAPDGSPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSA 407
Query: 388 SAHILGIEVCKEHLNKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+LGI+ + +E + ER + + F+ AD IR++L G
Sbjct: 408 MVAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAG 467
Query: 440 FILEDYKNPDNG 451
+ED +
Sbjct: 468 ITIEDSPGGSHW 479
>gi|198283982|ref|YP_002220303.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218665072|ref|YP_002426619.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
gi|198248503|gb|ACH84096.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
53993]
gi|218517285|gb|ACK77871.1| cysteinyl-tRNA synthetase [Acidithiobacillus ferrooxidans ATCC
23270]
Length = 462
Score = 342 bits (876), Expect = 9e-92, Method: Composition-based stats.
Identities = 179/491 (36%), Positives = 244/491 (49%), Gaps = 74/491 (15%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++TL R T + + P+++ +YVCG TVYDF H+G+AR M+ FD + R LR E
Sbjct: 8 TLFDTLRRSKTPLEVLRPNHVGLYVCGMTVYDFCHLGHARVMVTFDTVVRYLRERGYE-- 65
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII RA + ++I +T++ +D L C P +PRA
Sbjct: 66 VTYVRNITDIDDKIIRRALE------CGESIQSLTARFIDAMHEDEAALLCRRPDLEPRA 119
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+ M LI +I GHAY AN ++ + S P YG S + IDE G RV
Sbjct: 120 TEHVGAMQTLIGELIHRGHAYVAANGDVYYAVRSFPEYGRLSGKSIDELTSGARVEVGEE 179
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + P EP W S WG GRPGWHIECSAMS+ LG FDIHGGG DL FPH
Sbjct: 180 KRDPLDFALWKAAKPGEPSWPSAWGEGRPGWHIECSAMSADALGCAFDIHGGGADLQFPH 239
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A A+ W+HNGF+ + KMSKS NF T+ ELL +
Sbjct: 240 HENEIAQSQGAG--CAFAHYWMHNGFVRINDEKMSKSLNNFFTVRELLPR-------YSG 290
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVLSA 354
V+R +L +HYR P+++ L +A L++ +A
Sbjct: 291 EVLRFFILSSHYRSPLNYAEDALEQARAGLTRLYTALRGMPRPKIVAEMGSEWRERFHAA 350
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-EHLNKNI 405
+ +D +T +A+ L LARE + D L + A +LG+ E +
Sbjct: 351 MSDDFHTPAALAVLFDLARELNRLRDEGSEVAAPLATLLRELAGVLGLLQQDAEGFLRGH 410
Query: 406 SIAIEKLVQERLILLKMKKF-----------------SSADYIRKQLESKGFILEDYKNP 448
+ + + AD IR++L + G ILED
Sbjct: 411 DADVS--------------WIDGRIAARAAARQARDFAGADAIRQELTAAGVILED---- 452
Query: 449 DNGQRMTRWKQ 459
G T W++
Sbjct: 453 --GPGGTTWRR 461
>gi|311741770|ref|ZP_07715581.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
gi|311314776|gb|EFQ84682.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
Length = 468
Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats.
Identities = 164/490 (33%), Positives = 245/490 (50%), Gaps = 56/490 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R+ F + P + +Y CG TV HIG+ R +VFDVL R L
Sbjct: 1 MSLHLYDTATRRTAAFVPVTPGQVSIYHCGLTVQGPPHIGHIRKEVVFDVLRRWLERSGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT V N+TDIDDKII + R++ + N + L C PT++
Sbjct: 61 E--VTIVANVTDIDDKIIAKGREQG------RPWFAVAYANERALHAAYEVLGCQPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P+M+ +I +I GHAY + ++ FD S P YG+ SR+ +D+ +
Sbjct: 113 PRATGHVPEMVEMIATLIERGHAYPATDDSGDVYFDVRSWPEYGALSRQSVDDMQPAEDA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P K++ DF LWK +P W +PWGRGRPGWH+ECSAM+ YLG FDIHGG
Sbjct: 173 PPA-GKRDARDFALWKGHKAGDPDSASWTTPWGRGRPGWHLECSAMAGKYLGHEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A ++ A IW+HN LNL G KM+KS GN + ++E++
Sbjct: 232 GLDLRFPHHENELAQSRAAG--QRFARIWMHNAMLNLGGSKMAKSVGNTLMVSEVV---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------- 347
R P +R +L HYR I+F+ + L EA + T +
Sbjct: 286 ---RRVPPIALRYYLLAAHYRSVIEFSEESLAEAATAFERIAGFVTRAAELVGPGEPGDP 342
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVC- 397
++A+ +DL+ +A+ ALH + + ++L A +LG++
Sbjct: 343 TAEFVAAMDDDLSVPAALAALHATIGDGQRLLAAGSSPELREVLASVRAMLDVLGVDPLS 402
Query: 398 -------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++ + + L+++R + F +AD +R QL + G +ED +
Sbjct: 403 PVWSGATDDSTDQALDTLVGALLEQRTEARAAQDFQTADRVRDQLTAAGVEIEDTPHGP- 461
Query: 451 GQRMTRWKQK 460
RW K
Sbjct: 462 -----RWSVK 466
>gi|42523767|ref|NP_969147.1| hypothetical protein Bd2317 [Bdellovibrio bacteriovorus HD100]
gi|61216207|sp|Q6MKR7|SYC_BDEBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|39575974|emb|CAE80140.1| cysS [Bdellovibrio bacteriovorus HD100]
Length = 482
Score = 342 bits (876), Expect = 1e-91, Method: Composition-based stats.
Identities = 157/495 (31%), Positives = 235/495 (47%), Gaps = 62/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+N+ +++ +F + P ++MYVCGPTVY+F H+GN R +VF+++ L +
Sbjct: 1 MLKIHNSQSKQLEDFTPLTPGQVKMYVCGPTVYNFLHVGNFRGPVVFNMVRNWLEHLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY N TD+DDKII RA + S + ++ K ++ KD L P
Sbjct: 60 -KVTYALNFTDVDDKIINRANELGMS------PTELSEKYIAEYKKDFASLGLRPHDMNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T H+ + ++++++ AYEA ++++ S +YG S R D+ G RV
Sbjct: 113 KVTEHMDDIRSMVESLVSQKKAYEAQGDVLYSIESFKDYGKLSGRNTDDLLAGARVEVDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK + P E W SPWG GRPGWHIECSAM + G DIHGGG+DLIFP
Sbjct: 173 KKRNPMDFALWKAAKPGEVSWPSPWGPGRPGWHIECSAMIKNLFGDQIDIHGGGMDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + W+HN LN G+KMSKS GN +T+ E LE +
Sbjct: 233 HHENEIAQSEGCTG-KAFVKYWMHNNMLNFGGQKMSKSLGNIVTMREFLEM-------YN 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
A + + +L HYR DF + + A LS+ +
Sbjct: 285 AEIYKWMILSAHYRTLSDFGDEAVERAVGGLSRVYSALSMAESYLTPEVTQEDAAFAKIT 344
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLAREST-------------------------KNH 379
V A+ +D T A A+ ++ R+ K
Sbjct: 345 QDAWKKVEEAMNHDFGTPDAFAAMFEVVRQFNAQVRRGMKANPAIQGKALAFHNFVRKMG 404
Query: 380 DLLPIFNASAHILGIEVCKEHLNK-NIS-IAIEKLVQERLILLKMKKFSSADYIRKQLES 437
++ +F AH I++ L K N+ A++ LV ER K F+ +D +R ++ +
Sbjct: 405 SMMSLFQEPAHAFLIKLDDMLLKKMNLERSAVDALVAERGEARAAKDFAKSDELRAKITA 464
Query: 438 KGFILEDYKNPDNGQ 452
G + D +
Sbjct: 465 LGISVSDTPEGSFWE 479
>gi|224111652|ref|XP_002315932.1| predicted protein [Populus trichocarpa]
gi|222864972|gb|EEF02103.1| predicted protein [Populus trichocarpa]
Length = 532
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 174/524 (33%), Positives = 260/524 (49%), Gaps = 89/524 (16%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++K+YN++ ++ F++ P + MYVCG T YDF+H+G+AR + FD+L+R L++
Sbjct: 4 NEELKLYNSMTQQKEVFKSRIPGKVSMYVCGVTSYDFSHLGHARAAVAFDILFRYLQHLG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VTYVRN TDIDDKII RA + + ++S+ ++++ D T L CL PTH
Sbjct: 64 YE--VTYVRNFTDIDDKIIRRANEIG------EDPLSLSSRFCEEYLVDMTDLQCLIPTH 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR T+H+ Q+ +I II AY ++ F + PNYG S ++++ + G RV
Sbjct: 116 QPRVTDHVEQIKDMITQIIEKDCAYAVEGDVFFAVNKSPNYGQLSGQRLENNRAGERVAV 175
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL FDIHGGG+DLI
Sbjct: 176 DSRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGIDLI 235
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQSC A E + + W+HNG + KMSKS GNF TI ++ E
Sbjct: 236 FPHHENEIAQSCAAC-EESSVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITER------- 287
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ +R ++ HYR P++++V +L + + QT
Sbjct: 288 YHPLALRHFLISAHYRSPLNYSVSQLESSSDAVFYIYQTLQDCEDALLPFQEGSLKEGAG 347
Query: 347 ------------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNH-------- 379
+ + + +DLNT + A + + +
Sbjct: 348 QNANLVAITADAQKCISRLHEDFETKMSDDLNTSPLLTGAFQEALKVVNGSLGMLKKKQQ 407
Query: 380 ------------DLLPIFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQ 414
++ ILG+ EV ++ K + + L++
Sbjct: 408 KKQQLSLIRSVTEVKKEVTEVLRILGLFPPCTCAEVLQQLKGKALKRAGLTEDDVMSLIE 467
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+R + K + F +D IR L ++G L D + T W+
Sbjct: 468 DRAVARKSQDFKKSDQIRTDLSARGIALMD------VGKETVWR 505
>gi|237653707|ref|YP_002890021.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
gi|237624954|gb|ACR01644.1| cysteinyl-tRNA synthetase [Thauera sp. MZ1T]
Length = 461
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 182/496 (36%), Positives = 246/496 (49%), Gaps = 76/496 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F I+P +RMYVCG TVYDF H+G+AR M+VFD++ R LR +
Sbjct: 1 MLSIYNTLSRSKEAFTPIEPGKVRMYVCGMTVYDFCHLGHARVMVVFDMVARWLRASGLD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA++ ++I +T + +D L L P H+P
Sbjct: 61 --VTYVRNITDIDDKIIRRAQENG------ESIRQLTDRFIAAMHEDADALGVLRPDHEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+++ QM LI + G AY A N ++ + YG S + +DE + G RV
Sbjct: 113 RATDYVAQMQSLISRLEQKGLAYVAGNRDVCYAVRKFDGYGKLSGKSLDELRAGERVDVA 172
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K +P DF+LWK + EPG W SPWG GRPGWHIECSAMSS LG FDIHGGG+D
Sbjct: 173 QDKNDPLDFVLWKHAKVEEPGEVKWASPWGEGRPGWHIECSAMSSDLLGDHFDIHGGGMD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A N W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 LQFPHHENEIAQSEGAHG-HAFVNYWMHNGFVRVDDEKMSKSLGNFFTIREVL------- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIID 348
+ + V+R +L HYR ++++ L +A L++
Sbjct: 285 QKYDPEVVRFFILRAHYRSALNYSDAHLEDARNALTRLYTALKNVPVAGEPVVDWSEPFA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILG---------IEVC 397
+ +A+ +D NT A+ L +LA E ++ L A +LG ++
Sbjct: 345 QRLRAAMDDDFNTAEAVAVLFELANEVNRSAAPALAAQLKALGGVLGLLGREPQAFLQAG 404
Query: 398 KEHLNKNISIAI--------------EKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + AI +R IR +L G ILE
Sbjct: 405 APDADGLDADAIEAKIAERAAAKKAKNFAEADR--------------IRAELTEAGVILE 450
Query: 444 DYKNPDNGQRMTRWKQ 459
D G T W++
Sbjct: 451 D------GPGGTTWRR 460
>gi|305680320|ref|ZP_07403128.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
gi|305659851|gb|EFM49350.1| cysteine--tRNA ligase [Corynebacterium matruchotii ATCC 14266]
Length = 507
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 141/481 (29%), Positives = 216/481 (44%), Gaps = 51/481 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++T R + +F + P MY+CG T HIG+ R + FD++ R L +
Sbjct: 40 LRIFDTRTRSLRDFVPLTPGRATMYLCGATPQTNPHIGHVRSGVAFDIVRRWLMASGYD- 98
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN+TDIDDKI+ +A + N S + F L L P+ +PR
Sbjct: 99 -VAFVRNVTDIDDKILTKAAE------ANRPWWEWVSTYERAFSHAYDMLGVLPPSVEPR 151
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+ QMI +Q +I G AY A + FD ++ + + +
Sbjct: 152 ATGHMTQMITYMQRLIDAGFAYPAQGSVYFDVAAWSAADGSDYGSLSGNNLIDMEQGETD 211
Query: 185 K---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++P DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG FDIHGGGLDL
Sbjct: 212 NVGKRSPQDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGPEFDIHGGGLDLQ 271
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+ A A W+HN ++ + G KMSKS GN +++ E+++ +
Sbjct: 272 FPHHENEIAQAHAAGDG--FARYWMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR----- 324
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKGIIDPA 350
+R + HYR ++++ L EA + G A
Sbjct: 325 --PVELRYYLGSAHYRSVLEYSPDALQEAAQGYRRIESFVEKVDDLPGQPPVPVGEWTDA 382
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEHL 401
A+ +D+ A+ +H R + A +LG + +
Sbjct: 383 FAEAMNDDIGVPRALAEIHNTVRAGNSALAMRDYGEARRMAARVRAMTEVLGFDPLSDQW 442
Query: 402 NK-----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ +++ + R I +K + +AD +R +L G I+ D
Sbjct: 443 QDGESVRFDAPMVALDALVQEELDRREIARSVKDWETADAVRDRLLEVGIIVTDTPEGPT 502
Query: 451 G 451
Sbjct: 503 W 503
>gi|260221171|emb|CBA29469.1| Cysteinyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 483
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 170/491 (34%), Positives = 238/491 (48%), Gaps = 69/491 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+NTL R + F I+P ++RMYVCG T+YD HIG+AR M+ FDV+ R L+
Sbjct: 26 MSLRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASG- 84
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + D L P+ +
Sbjct: 85 -MQVTYVRNITDIDDKIIRRAVERGIT------IRQLTDEMIAAMHADIGALHIEPPSVE 137
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ LI + G AY +N ++ + YG S + +DE + G RV
Sbjct: 138 PRATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVAV 197
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF+LWK + P EP WES +G GRPGWHIECSAMS LG FDIHGGG
Sbjct: 198 LDGKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGA 257
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 258 DLQFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL------ 310
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
R + A +R ++ HYR ++++ L +A L +
Sbjct: 311 -RQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPFA 369
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK-----EHL 401
+A+ D T A+ L LA E ++ + + A LG+ +
Sbjct: 370 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQADANAYLQSG 429
Query: 402 NKNISIAIEKLV-------------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
I++ + D IRK L ++G +L+D
Sbjct: 430 AGLDEATIQQRIADRAAAKAAKDFALA-------------DAIRKDLLAQGIVLKDS--- 473
Query: 449 DNGQRMTRWKQ 459
T W+
Sbjct: 474 ---AAGTTWEV 481
>gi|326332066|ref|ZP_08198351.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
gi|325950204|gb|EGD42259.1| cysteine--tRNA ligase [Nocardioidaceae bacterium Broad-1]
Length = 469
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 237/484 (48%), Gaps = 53/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y++ R++ +F + P +YVCG TV H+G+ R + FDVL R LR
Sbjct: 1 MALRLYDSATREVRDFTPLQPGKASLYVCGLTVQSEPHVGHVRSGVNFDVLQRWLRASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E T++RN+TDIDDKI+ ++ + + ++ L PT++
Sbjct: 61 ET--TFIRNVTDIDDKILAKSADQG------RPWYNLAYDMHRELDAAYASLNVARPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
P AT HIP++I LI+ +I GHAY A + ++ FD S P YG S +K+D+ +
Sbjct: 113 PLATGHIPEIIALIEELIAKGHAYAAEDGSADVYFDVRSWPAYGELSGQKVDDMEAAADA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W SPWG GRPGWHIECSAM+ YLG FD HGG
Sbjct: 173 DPR-GKRDPRDFALWKGRKVSEPETASWPSPWGLGRPGWHIECSAMAGKYLGPAFDFHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE AQS A A+ W+HN ++ G KMSKS GN + I E+L
Sbjct: 232 GLDLRFPHHENEQAQSRAAG--RPFASYWLHNAWITTSGEKMSKSLGNSLVIPEVL---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ +R ++ HYR ++F+ + L EA + + G+
Sbjct: 286 ---KKVRGIELRYYLVAAHYRSHVEFSFEALDEAAAGFQRIEGFLDRAASVIGEIPADGV 342
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEV- 396
++A+ +DL T +A+ ALH++ RE K + A ILG++
Sbjct: 343 PSTDFVAAMDDDLGTPAAVAALHEVVREGNKLLADGDSPALRGVATSVRAMLDILGLDPA 402
Query: 397 ---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
E L + + + ++ ER K ++ AD +R +L+ G +ED
Sbjct: 403 DPSWGPESGADEKLTGALDVLVRGVLDERAEARAAKDWARADAMRDRLKDAGIEIEDTPE 462
Query: 448 PDNG 451
Sbjct: 463 GPKW 466
>gi|170783050|ref|YP_001711384.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|189082062|sp|B0RAX1|SYC_CLAMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169157620|emb|CAQ02818.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
Length = 484
Score = 341 bits (875), Expect = 1e-91, Method: Composition-based stats.
Identities = 157/492 (31%), Positives = 236/492 (47%), Gaps = 56/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++ + + +F + + +YVCGPTV HIG+ R + +D L R L Y
Sbjct: 1 MTLRLHDSRTQSLRDFVPLVDGRVGIYVCGPTVQSAPHIGHLRSALAYDQLRRWLAYRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT VRN+TDIDDK+I+ AR+ + + + +F + L L P+++
Sbjct: 61 D--VTLVRNVTDIDDKVIDNARR-GQEAGGTEEWWALAYRVELEFSRAYAALGILPPSYE 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT I +M +I ++ GHAY A+ ++ FDT+S P YG +R++ + +
Sbjct: 118 PRATASIGEMQAIIGRLVERGHAYPADDGSGDVYFDTASWPEYGELTRQRAADMEAAADA 177
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++ DF LWK + P EP W SPWG GRPGWHIECSAMS+ YLG FDIHGG
Sbjct: 178 DPRA-KRDVRDFALWKGAKPGEPASASWPSPWGAGRPGWHIECSAMSTRYLGAEFDIHGG 236
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A + A W+HNG + + G+KMSKS GN + +LL + +
Sbjct: 237 GLDLRFPHHENELAQSRAAG--DPFARYWLHNGLVAVAGQKMSKSLGNSLFAADLLASAR 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
V+R + HYR ++F L EAE L +
Sbjct: 295 -------PVVVRYFLGSAHYRSTLEFHDGALAEAEAALDRIETFLDRSARRLAGTRFQAE 347
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
+ A+ +DL+ A+ LH R D L +A
Sbjct: 348 PAATDGAPAAVPDEFAEAMDDDLSVPQALAVLHDAVRAGNAALDAGDLQEAASLRADVSA 407
Query: 388 SAHILGIEVCKEHLNKNIS--------IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+LGI+ + +E + ER + + F+ AD IR++L G
Sbjct: 408 MVAVLGIDPLADEWRTASDQPARRALQALVEHRIAERQTAREARDFALADRIRQELAEAG 467
Query: 440 FILEDYKNPDNG 451
+ED +
Sbjct: 468 ITIEDSPGGSHW 479
>gi|123968849|ref|YP_001009707.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|187629849|sp|A2BS39|SYC_PROMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123198959|gb|ABM70600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 489
Score = 341 bits (874), Expect = 1e-91, Method: Composition-based stats.
Identities = 179/509 (35%), Positives = 250/509 (49%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +K+ F+ ID +++Y CG TVYD H+G+AR I +DVL R L Y +
Sbjct: 1 MIKLFNTLSKKVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
RATNHI + I + G+AY + ++ + NYG S + + EQ + +
Sbjct: 112 RATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVN 171
Query: 182 --KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K NP DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 EENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------- 352
+R ++ +YR+P+DFT + L A + + A +
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGAFISIDKNES 344
Query: 353 ---------------------SALYNDLNTVSAIQALHKLAR-----------------E 374
AL NDLNT AI ++ LA+ E
Sbjct: 345 IEEKYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFTVE 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ LL F +LG++ I I L+ ERL K ++ AD
Sbjct: 405 LNEKFFLLENFKTLEKLTEVLGLKKEVLVKESKIKEEEISSLINERLKAKMEKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L+ KG L D + +T W +
Sbjct: 465 IRNLLKEKGIELID-----QSKEITTWIR 488
>gi|159903756|ref|YP_001551100.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|159888932|gb|ABX09146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 516
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 174/515 (33%), Positives = 251/515 (48%), Gaps = 81/515 (15%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+ NTL ++ F + P+++ +Y CG TVYD H+G+AR I +DVL R +
Sbjct: 21 KLTNTLTQQTEVFNPLKPNHVTIYCCGVTVYDLCHLGHARSYISWDVLRRYFIWQGY--K 78
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT+V+N TDIDDKII RA +E N ++ ++ +N ++F KD L L P PRA
Sbjct: 79 VTFVQNFTDIDDKIISRAAKE------NSTMNEVSERNIKEFHKDMDSLGILRPDRMPRA 132
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-- 183
T I + +IQ++ G AY ++ F PNYG S R + Q++
Sbjct: 133 TKCIDGIRSMIQDLEAKGAAYSTEGDVYFAVMRHPNYGKLSGRDLSAQQLNAEGRVTEKE 192
Query: 184 --HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + EP + SPWG GRPGWHIECSAM LG+ DIH GG DL+
Sbjct: 193 KARKQHPFDFALWKSAKDGEPSFSSPWGSGRPGWHIECSAMVLQELGETIDIHLGGADLV 252
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A +K AN W+HNG +N+ G+KMSKS GNF TI LLE
Sbjct: 253 FPHHENEIAQSEAATG-KKLANYWLHNGMVNVGGQKMSKSLGNFTTIRSLLE------EG 305
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------------- 342
A +R +L HYR+P+DFT++ L A
Sbjct: 306 VSAMTLRFFILQAHYRKPLDFTLEGLEAASSGWKGLNTAICLGEVNKNILQWPKHPVNKT 365
Query: 343 ------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------- 383
+ + + +DLNT +A+ L +LAR + +
Sbjct: 366 TETNSTPTEAREELDHLRQRFIDVMNDDLNTSAAMAVLFELARPLKSIANEIERNPYKQI 425
Query: 384 -------------IFNASAHILGI--EVCKEHLNKNISI----AIEKLVQERLILLKMKK 424
A++LG+ E+ +E+L++N SI IE+ +++R +++
Sbjct: 426 PDIKAKKLYARWLTLVELANVLGLQGEMKQENLSRNSSIPNKSVIEEAIKQRSAAKRVRN 485
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ AD IR L+ +G L D +T W +
Sbjct: 486 YEKADQIRDDLKKQGIELIDKSEG-----VTDWIR 515
>gi|319794160|ref|YP_004155800.1| cysteinyL-tRNA synthetase [Variovorax paradoxus EPS]
gi|315596623|gb|ADU37689.1| cysteinyl-tRNA synthetase [Variovorax paradoxus EPS]
Length = 458
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 168/484 (34%), Positives = 232/484 (47%), Gaps = 63/484 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R++ EF + P +RMYVCG TVYD+ H+G+AR MI FDV+ R L+
Sbjct: 1 MSLRIYNTLSRELEEFSPLQPGKVRMYVCGMTVYDYCHLGHARSMIAFDVVQRWLKASGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRNITDIDDKII RA + ++I +T + +D L PTH+
Sbjct: 61 D--VTYVRNITDIDDKIIRRAVENG------ESIRALTDRMIDALHEDADALGIARPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT++IPQM+ +I + G AY N ++ + P YG S + IDE G RV
Sbjct: 113 PRATDYIPQMLSMIGTLEKKGLAYRAENGDVNYAIRKFPGYGKLSGKSIDELHAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P D +LWK + EP W S +G GRPGWHIECSAM+ LG+ DIHGGG
Sbjct: 173 LDGKDDPLDPVLWKSAKASEPEEVKWASEFGAGRPGWHIECSAMACALLGETLDIHGGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A+ + +N W+HNGF+ + KMSKS GNF I ++L
Sbjct: 233 DLQFPHHENEIAQSEGAND-KPLSNYWMHNGFIVTDNEKMSKSLGNFFLIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
+ + A IR +L HYR P++++ L +A L +
Sbjct: 286 -KKYDAETIRFFVLRAHYRRPLNYSDVHLDDARNSLKRLYTALDLVAPAEVTIDWTDPYA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCKEHL----- 401
+A+ D T A+ L LA E + + A + I
Sbjct: 345 ARFKAAMDEDFATPEAVAVLFDLAGEVNRTRSATQAGLLKALGGCVQILQSDPKSFLRAG 404
Query: 402 NKNISIAIEKLVQ-------------ERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
AI+ + D IR+ L +G +L+D
Sbjct: 405 ATLDDAAIQAQIDARAAAKAAKNFAEA-------------DRIRQGLLEQGIVLKDSPTG 451
Query: 449 DNGQ 452
+
Sbjct: 452 TSWT 455
>gi|240172166|ref|ZP_04750825.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
Length = 468
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 154/478 (32%), Positives = 229/478 (47%), Gaps = 46/478 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 6 RLRLHDTAAGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIARGFD 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDIDDKI+ +A + + F L + P+ +P
Sbjct: 66 --VAFIRNVTDIDDKILNKAAAAG------RPWWEWAATYERAFTAAYDALDVMPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI L++ +I GHAY + ++ FD S PNYG S KID+ G V
Sbjct: 118 RATGHITQMIELMERLIETGHAYTGDGDVYFDVLSYPNYGQLSGHKIDDVHQGEGVAAG- 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DLIFP
Sbjct: 177 -KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARTYLGSEFDIHCGGMDLIFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPAMLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVLSA 354
P +R + HYR ++F+ L +A + + G P A
Sbjct: 287 PPELRYYLGSAHYRSMLEFSDTALQDAVNAYVGVEDFLHRVRSRVGAVLPGEWTPRFAEA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNI 405
L +DL+ A+ +H E + D ILG + E
Sbjct: 347 LDDDLSVPIALAEIHHARAEGNRALDAGDHEGALRSAGSIRTMMGILGCDPLDERWESRD 406
Query: 406 S-----IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
A++ L ++ R + + ++ AD IR +L++ G + D +
Sbjct: 407 ETTAALAAVDVLVHAELENREKAREQRNWALADQIRDRLKNAGIEVTDTADGPQWTLG 464
>gi|158312230|ref|YP_001504738.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
gi|158107635|gb|ABW09832.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
Length = 506
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 152/520 (29%), Positives = 226/520 (43%), Gaps = 88/520 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R++ F + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MGLHLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTALAFDLLRRWLTQSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N+TDIDDKII A + S+ + ++ T+ F + L PT
Sbjct: 60 -LSVTFVQNVTDIDDKIIVNADRAGTSV------WELATRQTRAFEDAYRAVGILPPTIS 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+M+ +I ++ G AY + F + +YG+ S ++ +
Sbjct: 113 PRATGHIPEMLEMIAVLVERGFAYPGAGSVWFRVGAFADYGALSHQRPAAM--HPSPESE 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK P EP W SPWG GRPGWH+ECSAM YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMVGKYLGDVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCC----------------------------ADRIEKTANIWIHNGFLNLE 274
PHHENE AQS C A + A W+H G L
Sbjct: 231 PHHENERAQSVCAAELAAAGAAPAAASSRGAVAAGADVPGAGGAGEMARYWMHVGLLTTG 290
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G KMSKS GN + + L + V+R +L HYR ++++ Q L E+
Sbjct: 291 GTKMSKSLGNSFFVTDALAAVR-------PQVLRYHLLSAHYRSSLEYSAQTLEESAAAH 343
Query: 335 SKWPQTSTSKGII----------------------------DPAVLSALYNDLNTVSAIQ 366
+ + I +AL +DL A+
Sbjct: 344 DRIETFVRNALDILGGPAEAAALAAEADRVAGTEAADADGAWSEFAAALDDDLGVGRALA 403
Query: 367 ALHKLARESTKNHDL---------LPIFNASAHILGIEVCKE------HLNKNISIAIEK 411
AL + + + + +LG++ ++ L + ++
Sbjct: 404 ALFGVVGRGNQVLSKTHSRELAGWVDVARRMLTVLGLDPVEQWPTAGAELRPALDGVMDV 463
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L+ R + +S AD IR +L + G ++ED
Sbjct: 464 LLDLRSAARARRDYSEADSIRSRLAAAGVVIEDTPEGQRW 503
>gi|300780461|ref|ZP_07090317.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
gi|300534571|gb|EFK55630.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
Length = 473
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 140/479 (29%), Positives = 224/479 (46%), Gaps = 50/479 (10%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T R + F+ ++ +Y+CG T HIG+ R + FD++ R +
Sbjct: 4 QIFDTATRTLRAFEPFRDGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRWFAANGND-- 61
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +VRN+TDIDDKI+ +A + + S ++F + L L P+ +PRA
Sbjct: 62 VAFVRNVTDIDDKILTKAAE------HDRPWWEWVSTYEREFSRAYETLGVLPPSVEPRA 115
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T H+ QM+ +Q ++ +G+AY A+ + FD ++ G + E ++
Sbjct: 116 TGHVTQMVDYMQRLMDNGYAYAADGSVYFDVAAWVAAGGDYGSLSGNRVEDMEQGETDNR 175
Query: 186 KNPA--DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
DF LWK + P EP W +PWG GRPGWH+ECSAMS+ YLG+ FDIHGGGLDL FP
Sbjct: 176 GKRGAHDFALWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTWYLGESFDIHGGGLDLKFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS A A W+HN ++ + G KMSKS GN ++I+ +LE +
Sbjct: 236 HHENEQAQSHAAGDG--FARYWMHNHWVTMAGEKMSKSLGNVLSIDRMLEAVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GIIDPAVLSAL 355
+R + HYR ++++ + L EA + + T G A A+
Sbjct: 287 PVELRYYLGSAHYRSVLEYSPEALQEAAVAYRRIEDLITRASALAPVEPGQWTDAFADAM 346
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEH------ 400
D + A+ +H R + K L A A +LG++ +
Sbjct: 347 NEDFSVPRALAEIHNTVRAANKALAAGDTDEATRLAGAVRAMAGVLGVDPVEWAGRAGAG 406
Query: 401 --------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + + + + R K +++AD +R +L G + D +
Sbjct: 407 SDSADTARVTEALDVLVRAELDRRAEARAAKDWATADAVRDRLTEAGIEVTDTADGAQW 465
>gi|91216061|ref|ZP_01253030.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
gi|91186038|gb|EAS72412.1| cysteinyl-tRNA synthetase [Psychroflexus torquis ATCC 700755]
Length = 497
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 160/495 (32%), Positives = 236/495 (47%), Gaps = 56/495 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +KIYN++ + +FQ I + MYVCGPTVY H+GN R I FD+++R L++
Sbjct: 7 QSLKIYNSITGEKEDFQPITKGYVGMYVCGPTVYSNVHLGNCRTFISFDLVFRYLKHLGY 66
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ YVRNITD +D+I ++A+ + + K + F +
Sbjct: 67 --KIRYVRNITDAGHLENDGEEGEDRIAKKAK------VMELEPMEVVQKYSIDFHQILE 118
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRK 169
+ L P+ +P AT HI + I I+ II G AY+ N + FD + +YG S RK
Sbjct: 119 KFNNLPPSIEPTATGHIIEQIETIKTIIDKGLAYQVNGNVYFDVLKYNEKHHYGKLSGRK 178
Query: 170 IDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
I++ + + KKNP DF LWK++ P W SPWG G PGWH+EC+ MSS YL
Sbjct: 179 IEDLISNTRELAGQSDKKNPQDFALWKKAEPQHIMRWPSPWGIGFPGWHLECTVMSSKYL 238
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G FDIHGGG+DL FPHHE EIAQ A + N W+H L L G+KMSKS GN I
Sbjct: 239 GDEFDIHGGGMDLKFPHHECEIAQGQAATGKDP-VNYWMHANMLTLNGKKMSKSTGNNIL 297
Query: 288 INELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------- 337
EL + +S+ APVIR ML +YR +DF+ + L+ +E K
Sbjct: 298 PRELFTGDNETLSKSYTAPVIRFFMLQANYRSILDFSDEALSASEKGFQKLMESLSTLKV 357
Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--------DLLPIF 385
+ + A+ +D N+ I L + ++ + L +
Sbjct: 358 LKASKTSDFNVNTWKDKCYEAMNDDFNSPILIAHLFEAVKQINLAKSGDKRLSRESLDLL 417
Query: 386 NA-----SAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ++G+E + E + IE ++Q R K F ++D IR +L
Sbjct: 418 SKTMNDFIFEVMGLEDLEDTSKSEANTDDFKELIEFMIQMRNHARLNKDFETSDKIRDKL 477
Query: 436 ESKGFILEDYKNPDN 450
L+D K +
Sbjct: 478 LKMDVELKDQKEGTS 492
>gi|126437687|ref|YP_001073378.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
gi|187629831|sp|A3Q6W0|SYC_MYCSJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126237487|gb|ABO00888.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
Length = 481
Score = 341 bits (874), Expect = 2e-91, Method: Composition-based stats.
Identities = 151/474 (31%), Positives = 228/474 (48%), Gaps = 46/474 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T+ + +F + ++ +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 17 LRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGLD- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 76 -VAFIRNVTDIDDKILNKAADAG------RPWWEWAATYERAFSAAYDALGVLPPSAEPR 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QM+ LI+ +I GHAY + ++ F+ +++P+YG S +ID+ G V
Sbjct: 129 ATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVATG-- 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL+FPH
Sbjct: 187 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLVFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 247 HENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVRAAE----- 299
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVLSAL 355
+R + HYR ++F+ L +A + + G P +AL
Sbjct: 300 --LRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHRVRTRVGTVVPGDWTPKFAAAL 357
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKNIS 406
+DL+ A+ +H + D A ILG + E
Sbjct: 358 DDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWESRDE 417
Query: 407 -----IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
AI+ L + R K +++AD IR +L+ G + D +
Sbjct: 418 TSAALAAIDVLVRWALDSRAEARNRKDWATADQIRDRLKEAGIEVTDTADGPQW 471
>gi|329906071|ref|ZP_08274354.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
gi|327547346|gb|EGF32177.1| Cysteinyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
Length = 464
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 251/482 (52%), Gaps = 47/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL R+ F + RMYVCG T+YD+ HIG+ R M+ FDV+YR L+
Sbjct: 3 SLKIYNTLAREKQLFTPMVAGEARMYVCGMTIYDYCHIGHGRMMMAFDVVYRWLQVSGY- 61
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRNITDIDDKII RA + ++IS +T + DT L L PTH P
Sbjct: 62 -SVTYVRNITDIDDKIIRRAVENK------ESISSLTERFIDAMAYDTAALGILPPTHAP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++PQM+ +I + G AY+ + ++ + P YG S + +D+ + G RV
Sbjct: 115 RATRYVPQMLNMITRLQEKGLAYQGDDGDVNYSVRDFPGYGKLSGKSLDDLRAGERVDVN 174
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG D
Sbjct: 175 TGKRDPLDFVLWKAAKDSEPEDAKWASPWGHGRPGWHIECSAMACALLGEQFDIHGGGTD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS A+ + AN W+HNG + ++ KMSKS NF I ++L
Sbjct: 235 LQFPHHENEIAQSEGAND-KPFANYWLHNGHVRIDNEKMSKSLDNFFLIRDVLA------ 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDP 349
+ A V+R +L HYR P++++ L +A + L++
Sbjct: 288 -KYDAEVLRFFILRAHYRSPLNYSDTHLDDARVALTRLYTALKDVAPSEEELDWASPYPQ 346
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILG---IEVCKEHL 401
A+ +D NT A+ L LA E ++ D L A +L +E +
Sbjct: 347 RFAEAMDDDFNTPLALAVLFDLATEINRSGDPALAAQLRALAAVLGLLERSPLEFLQGAH 406
Query: 402 NKNISIAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
S L+ E R+ + +++AD +R +L + G +LED +T W
Sbjct: 407 GTVASDEDNALIAEKIAARIAAKIARDYATADRLRDELLAAGILLEDKPG-----NITEW 461
Query: 458 KQ 459
++
Sbjct: 462 RR 463
>gi|314965270|gb|EFT09369.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA2]
Length = 476
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 157/491 (31%), Positives = 226/491 (46%), Gaps = 60/491 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT I F+ + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 1 MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT V N+TDIDDKI+ ++ + L C PT++
Sbjct: 61 Q--VTVVANVTDIDDKILAKSAATGT------PWWAHAYHYENELHAAYKALGCRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+MI L++ +I GHAY A ++ FD + P YG S ++DE
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQS A A W+HN ++ + G KMSKS GN + E+
Sbjct: 232 GIDLRFPHHENELAQSAAAG--RPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEVT---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTV------QRLTEAEILLSKWPQTSTSKG----- 345
+++ +R +L HYR I+F+ L EA + + G
Sbjct: 286 ---KAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAH 390
+ A ++A+ +DL T A+ AL E K+ L A
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402
Query: 391 ILGIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ G++ + + ++++R K +++AD IR L + G
Sbjct: 403 VFGLDPQAPEWADVTGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462
Query: 441 ILEDYKNPDNG 451
+ED +
Sbjct: 463 TIEDTPAGAHW 473
>gi|282853446|ref|ZP_06262783.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
gi|282582899|gb|EFB88279.1| cysteine--tRNA ligase [Propionibacterium acnes J139]
gi|314922189|gb|EFS86020.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL001PA1]
gi|314928560|gb|EFS92391.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL044PA1]
gi|314970346|gb|EFT14444.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA3]
gi|314982476|gb|EFT26569.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA3]
gi|315092230|gb|EFT64206.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA4]
gi|315094030|gb|EFT66006.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL060PA1]
gi|328908175|gb|EGG27934.1| cysteine--tRNA ligase [Propionibacterium sp. P08]
Length = 476
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 157/491 (31%), Positives = 226/491 (46%), Gaps = 60/491 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT I F+ + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 1 MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT V N+TDIDDKI+ ++ + L C PT++
Sbjct: 61 Q--VTVVANVTDIDDKILAKSAATGT------PWWAHAYHYENELHAAYKALGCRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+MI L++ +I GHAY A ++ FD + P YG S ++DE
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQS A A W+HN ++ + G KMSKS GN + E+
Sbjct: 232 GIDLRFPHHENELAQSAAAG--RPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEVT---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTV------QRLTEAEILLSKWPQTSTSKG----- 345
+++ +R +L HYR I+F+ L EA + + G
Sbjct: 286 ---KAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAH 390
+ A ++A+ +DL T A+ AL E K+ L A
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402
Query: 391 ILGIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ G++ + + ++++R K +++AD IR L + G
Sbjct: 403 VFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462
Query: 441 ILEDYKNPDNG 451
+ED +
Sbjct: 463 TIEDTPAGAHW 473
>gi|188584469|ref|YP_001927914.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
gi|179347967|gb|ACB83379.1| cysteinyl-tRNA synthetase [Methylobacterium populi BJ001]
Length = 462
Score = 340 bits (873), Expect = 2e-91, Method: Composition-based stats.
Identities = 207/482 (42%), Positives = 282/482 (58%), Gaps = 49/482 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFAPIDPTNVRMYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG + VTY RN+TD+DDKI RA + + I +T QF KD L L
Sbjct: 61 YGPEHVTYARNVTDVDDKINARALERGIT------IRALTDGTLAQFHKDIRDLGVLMAE 114
Query: 121 -----------HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M LI+ ++ GHAY A ++FD S+P+YG+ S+R
Sbjct: 115 DVNRAGEPARFIEPRATDHIGEMHRLIEGLVAAGHAYVAEGHVLFDVPSMPDYGALSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK S EP W SP G GRPGWHIECSAMS +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPSKAGEPSWPSPCGIDAPGRPGWHIECSAMSWKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LGK FDIH GG+DLIFPHHENE+AQS C + A++W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGKTFDIHAGGIDLIFPHHENEVAQSRCCFGTDVMAHVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---TSTS 343
TI ++L+ WP V+RL ML THYR+PID+T++ L E+ +L +W + +
Sbjct: 295 TIRQVLDD-------WPGEVVRLNMLKTHYRQPIDWTLRGLEESSRMLDRWYEAAGEAAP 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK 403
+ V+ AL +DLNT +AI LH+LA A A ++G + +
Sbjct: 348 DAAVPGGVVEALGDDLNTPAAIGELHRLA------GSDAGALKAGAGLMGFLPTTKAKRE 401
Query: 404 N--------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+E L+ ER K ++++D +R L + G ++D K+ T
Sbjct: 402 AERVGAAGIDVARVEALIAERKAARAAKDWAASDRVRDALTALGVSVKDNKDGT-----T 456
Query: 456 RW 457
W
Sbjct: 457 TW 458
>gi|150401798|ref|YP_001325564.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
gi|187631641|sp|A6UWT0|SYC_META3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|150014501|gb|ABR56952.1| cysteinyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
Length = 479
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 175/501 (34%), Positives = 242/501 (48%), Gaps = 69/501 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNT + F+ I+ I+MYVCGPTVYD AH+G+ R + FD++ R L +
Sbjct: 1 MKIYNTASKNKETFKTINNKKLIKMYVCGPTVYDHAHLGHGRTYVAFDIIRRYLEHK--N 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + N TDIDDKII RA ++ + I ++ K F++D +L P
Sbjct: 59 YIVQLIINFTDIDDKIINRANEQGTT------IKELSDKFINSFLEDMEKLNVKPALIYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + HI ++I I+ + G+AY + + FDTS YG + I E+ +
Sbjct: 113 RVSEHINEIIEFIKVLEKKGYAYATADGVYFDTSKYEKYGELRKINIKEETSEQK-NINI 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KKN DF LWK + P EP W+SPWG GRP WHIECSAMS YLG FDIHGGG DLIFP
Sbjct: 172 NKKNQRDFALWKFAKPDEPKWDSPWGEGRPAWHIECSAMSLKYLGDNFDIHGGGCDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS C +K N WIH GF+ + KMSKS GNF T+ +L E +
Sbjct: 232 HHENEKAQSECYTD-KKWVNYWIHTGFVMVNNEKMSKSLGNFSTLKDLFE-------KYS 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------TSKGIIDPA 350
A +IR +L HY P+D+T + ++ L K T ID
Sbjct: 284 AELIRFFLLERHYSSPLDYTEDAINHSKNNLDKLYNTIQNITVAFRNSEIKYKLNEIDKN 343
Query: 351 VLSA-----------LYNDLNTVSAIQALHKLARESTK------NHDLL----------P 383
+ + ++ NT A++ + +++ K N D L
Sbjct: 344 TIETIHNCTEKFYTAMDDNFNTAQALKYVFEVSTAINKYINNYANSDELPNYSIILKSYE 403
Query: 384 IFNASAHILGIE---VCKEHLNKNISIA--IEKLVQERLILLKMKKFSSADYIRKQLESK 438
F I GI N NI+ I L++ R L K K ++ +D IR +L+
Sbjct: 404 FFKMVGEIFGIFGSSTINTATNTNIAEENLINILMELRADLKKEKNYNLSDKIRDKLKEM 463
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
ILED + T WK+
Sbjct: 464 DIILEDS------PKGTIWKK 478
>gi|221124448|ref|XP_002165201.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
Length = 458
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 170/491 (34%), Positives = 238/491 (48%), Gaps = 69/491 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+NTL R + F I+P ++RMYVCG T+YD HIG+AR M+ FDV+ R L+
Sbjct: 1 MSLRIFNTLTRSLQPFTPIEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + D L P+ +
Sbjct: 60 -MQVTYVRNITDIDDKIIRRAVERGIT------IRQLTDEMIAAMHADIGALHIEPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ LI + G AY +N ++ + YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLSLIGELEAKGLAYRASNGDVNYSVRKFEGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF+LWK + P EP WES +G GRPGWHIECSAMS LG FDIHGGG
Sbjct: 173 LDGKEDPLDFVLWKSAKPEEPPEAKWESVFGTGRPGWHIECSAMSCATLGTTFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGAHG-QALANFWMHNGFVRVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIID 348
R + A +R ++ HYR ++++ L +A L +
Sbjct: 286 -RQYDAETVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSQVQATDISIDWSNPFA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH--DLLPIFNASAHILGIEVCK-----EHL 401
+A+ D T A+ L LA E ++ + + A LG+ +
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKSVEAASLLKALGACLGLLQADANAYLQSG 404
Query: 402 NKNISIAIEKLV-------------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
I++ + D IRK L ++G +L+D
Sbjct: 405 AGLDEATIQQRIADRAAAKAAKDFALA-------------DAIRKDLLAQGIVLKDS--- 448
Query: 449 DNGQRMTRWKQ 459
T W+
Sbjct: 449 ---AAGTTWEV 456
>gi|109894892|sp|Q3KKR0|SYC_CHLTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 477
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 159/495 (32%), Positives = 239/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 1 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 60 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 112 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 171
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 231
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 232 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 344
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 345 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 404
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 405 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 461
Query: 439 GFILEDYKNPDNGQR 453
GF +ED K ++
Sbjct: 462 GFAIEDGKTGMKVKK 476
>gi|212703175|ref|ZP_03311303.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
gi|212673441|gb|EEB33924.1| hypothetical protein DESPIG_01217 [Desulfovibrio piger ATCC 29098]
Length = 483
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 173/499 (34%), Positives = 238/499 (47%), Gaps = 69/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL RK EF + P + MYVCG T YD+ HIG+AR +VFDVL R LR +
Sbjct: 1 MQLYNTLTRKKEEFVPVRPGKVNMYVCGITAYDYCHIGHARSALVFDVLVRHLRALGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN TD+DDKII RA +E + F +D RL + H+PR
Sbjct: 60 -VTFVRNFTDVDDKIIRRANEEKRD------WREVGQTYIDAFHEDMDRLNVVRADHEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +I QM L +I G AY + ++ F + P YG S R +DE + G RV
Sbjct: 113 ATEYIQQMQDLCSELIAQGKAYAVPSGDVYFRVRAYPPYGKLSGRSLDELQAGARVAPGE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP WESPWG+GRPGWHIECSAMS YL DIHGGG DLIFP
Sbjct: 173 EKQDPLDFALWKAAKPGEPFWESPWGKGRPGWHIECSAMSKEYL--PLDIHGGGQDLIFP 230
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A + A W+HNGF+ + KMSKS GNF TI ++L + +
Sbjct: 231 HHENEIAQTEAACSCQ-LARFWVHNGFVQVNAEKMSKSLGNFKTIRDILAS-------YL 282
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------TSKGIIDPAVL 352
+R +L HYR PIDFT + E+E L + + K + +L
Sbjct: 283 PETLRFFLLGKHYRSPIDFTADIMDESEKALQRIYECQLEAGKALERAKWKKVDLPADIL 342
Query: 353 SAL-----------YNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAH-- 390
+D+NT A+ + R + + +
Sbjct: 343 KEWDEHGQGFNAALDDDVNTAQALGHIFSQVRLVNRVLEDKALRAGEGARRLLEEFFERH 402
Query: 391 --------ILG------IEVCKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYIRK 433
+ G + ++ ++I ++ L+ ER K F+ +D +R
Sbjct: 403 NDWSAQLGLFGQDPATFLLALRDQRAARLNIDVPRVQTLLDERAAARAAKDFARSDELRA 462
Query: 434 QLESKGFILEDYKNPDNGQ 452
L G + D
Sbjct: 463 ALAELGVAVRDTVEGQVWD 481
>gi|297801734|ref|XP_002868751.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
gi|297314587|gb|EFH45010.1| tRNA synthetase class I (C) family protein [Arabidopsis lyrata
subsp. lyrata]
Length = 511
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 174/518 (33%), Positives = 247/518 (47%), Gaps = 83/518 (16%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++K+YNT+ ++ I P I +YVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 5 KMELKLYNTMTQQKEVLIPITPGKIGLYVCGITAYDFSHIGHARAAVSFDVLYRYLKHLG 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V +VRN TD+DDKII RA + + ++++ ++++ D L CL PTH
Sbjct: 65 YE--VNFVRNFTDVDDKIIIRANENG------EDPLDLSNRFCEEYLVDMGALQCLLPTH 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR + H+ +I +I+ II Y ++ F PNYG S + ++ + G RV
Sbjct: 117 QPRVSEHMDHIIKMIEKIIEKDCGYVVEGDVFFSVDKSPNYGKLSGQLLEHTRAGERVAV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+HYL FDIHGGG DL
Sbjct: 177 DSRKRNPADFALWKAAKPEEPSWESPWGPGRPGWHIECSAMSAHYLSPKFDIHGGGADLK 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+C A + N W+HNG + + KM+KS NF TI E+ +
Sbjct: 237 FPHHENEIAQTCAAC-EDSGVNYWLHNGHVTINNEKMAKSKKNFKTIREITAS------- 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ +R ++ YR P+ F+ +L + L QT
Sbjct: 289 YHPLALRHFLMSAQYRSPLSFSASQLESSSDALYYVYQTLQDLDEDLSPYREALSEDGGK 348
Query: 347 -------------IDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLPIF------- 385
+ S + +DLNT + A + N L
Sbjct: 349 AEQTPEGKDIIKKLKSEFESKMLDDLNTAHILTGAYQDALKFINANRSKLKKMQKKQRMS 408
Query: 386 ------------NASAHILGI-------EVCKEHLNKNI------SIAIEKLVQERLILL 420
+LG+ EV KE K + I + +++R+
Sbjct: 409 MLVSLVEIEKAAREVLDVLGLLTTLSYAEVLKEMKLKTLIRAEMGEEDILREIEDRITAR 468
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K F+ +D IR++L KG L D + T W+
Sbjct: 469 NNKDFAKSDEIREKLTRKGIALMD------FGKETVWR 500
>gi|260437953|ref|ZP_05791769.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
gi|292809704|gb|EFF68909.1| cysteine--tRNA ligase [Butyrivibrio crossotus DSM 2876]
Length = 472
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 162/485 (33%), Positives = 241/485 (49%), Gaps = 48/485 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K+ +NTL RK+ +F + MY CGPTVY FAHIGN R I+ D+L + LRY
Sbjct: 1 MENKVYFFNTLTRKVEQFIPNVDGKVAMYTCGPTVYHFAHIGNLRSYIMEDILEKTLRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH ++ I T F D
Sbjct: 61 GYD--VKRVMNITDVGHLTSDADTGEDKMLKGAKREHKTV------MEIAKYYTDAFFDD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L P ATN IP+ I +++ ++ +AY A + FDTS + +Y FS +
Sbjct: 113 CRKLNIKRPDVVEPATNCIPEFINMVKVLLEKDYAYIAGGNVYFDTSKLDDYYVFSSQSE 172
Query: 171 DEQK--MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
E + V E +KKN ADF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KELMVGVRDDVSEDINKKNKADFVLWFTKSKFDNQELKWDSPWGVGYPGWHIECSCISMK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+LG+ DIH GG+D IFPHH NEIAQS K N W H LN + KMSKS G F
Sbjct: 233 HLGEYMDIHCGGVDNIFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNDKSGKMSKSKGEF 291
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+T++ L E + + V RL L +HYR+P++F+ + L +K +
Sbjct: 292 LTVSLLEE------KGYNPLVYRLFCLQSHYRKPLEFSYEVLDNMTTAYNKLIKKIGELK 345
Query: 346 I-----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
A+ +DLNT SAI ++ + R + L + + +L +
Sbjct: 346 ADGSVDEEAFAGFRNKFEDAICSDLNTSSAITVIYDVLRSDINDVTKLELIKSFDEVLSL 405
Query: 395 EVCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ K+H ++ + I ++ER K K F+ AD IR +L +KG ++D +
Sbjct: 406 DLLKDHGNDKESSVDSELKEYILAKIEERKAAKKEKDFAKADAIRDELAAKGIQIKDTRE 465
Query: 448 PDNGQ 452
+
Sbjct: 466 GTVWE 470
>gi|291519016|emb|CBK74237.1| cysteinyl-tRNA synthetase [Butyrivibrio fibrisolvens 16/4]
Length = 475
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 157/487 (32%), Positives = 228/487 (46%), Gaps = 51/487 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK K YNT R++ F+ + + MY CGPTVY FAHIGN R I+ D L + L Y
Sbjct: 1 MKMDFKFYNTATRQVEVFKPNEEGKVSMYTCGPTVYHFAHIGNIRTYIMQDALIKSLEYA 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK++ A++EH ++ I T F KD
Sbjct: 61 GYQ--VKRVMNITDVGHLSSDADTGEDKMVAGAKREHKTV------MEIAKFYTDAFFKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ P ATN IP+ I++++ ++ G+AY A + FDTS + +Y FS
Sbjct: 113 FDAVGNKRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLSDYYVFSSSVE 172
Query: 171 DEQKM---GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
E V E +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KEALEVGVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG+ DIH GG+D IFPHH NE+AQS K N W H+ LN + KMSKS G
Sbjct: 233 KHLGEYMDIHCGGVDNIFPHHTNEVAQSEAYLG-HKWCNYWFHSNHLNDQSGKMSKSKGA 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
+T++ L E + + V R L +HYR+P+ F+ L +K
Sbjct: 292 ILTVSVLQE------KGYDPLVYRFFCLQSHYRKPLVFSWDNLDNTVTAYNKLVKRVSEL 345
Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
K + A+ NDLNT AI L+ + T + L + + +L
Sbjct: 346 KAEGAVDEAVKSEFEEKFCEAVSNDLNTSMAITILYDALKADTSDATKLALVESFDKVLS 405
Query: 394 IEV---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+++ ++ + I + R K K F++AD IR +L +KG ++D
Sbjct: 406 LDLIGHAKALGEAGSSVDAELEAYINDAIARRAEAKKAKDFATADAIRDELLAKGVEIKD 465
Query: 445 YKNPDNG 451
+
Sbjct: 466 TREGVVW 472
>gi|302870248|ref|YP_003838885.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
gi|315503473|ref|YP_004082360.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
gi|302573107|gb|ADL49309.1| cysteinyl-tRNA synthetase [Micromonospora aurantiaca ATCC 27029]
gi|315410092|gb|ADU08209.1| cysteinyl-tRNA synthetase [Micromonospora sp. L5]
Length = 471
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 162/485 (33%), Positives = 236/485 (48%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + + +Y+CG T+ HIG+ R + +DVL R L
Sbjct: 1 MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLSKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT++RN+TDIDDK++ +A ++ + I N Q L L PT++
Sbjct: 61 E--VTFIRNLTDIDDKVLAKAMEQ------DRPFWSIAYANEQILTTSYRALNVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P+M LI +I GHAY A + ++ FD +S P YGS S + + +
Sbjct: 113 PRATGHVPEMHELIARLIETGHAYPATDGSGDVYFDVASWPAYGSLSGQSPADMQ-PAGD 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF LWK + P EP W SPWGRGRPGWHIECSAM YLG FDIHGG
Sbjct: 172 APDRGKRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGPEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENEIAQS AD A W+H+G L + G KM KS GN L+
Sbjct: 232 GLDLTFPHHENEIAQSQAAD--LPFARYWVHHGLLGIGGTKMGKSLGNT------LDLDY 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GII 347
+R + HYR ID++ L EA + + G +
Sbjct: 284 VAALGVRPVELRYYYVAAHYRSRIDYSEDALREAAVAYRRIEGFVQRAAERVGPGRPGDL 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCK 398
++A+ +DLNT +A+ ALH++ R+ L A ILG++
Sbjct: 344 PAGFVAAMDDDLNTSAALAALHEVVRDGNTALTAGDDVTVRTTLAATRAMLDILGVDPLD 403
Query: 399 EHL-----NKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
++ ++ L+ ++R K +++AD +R QL+ G ++ED
Sbjct: 404 PAWTGGGRTDDLRGVVDSLIALALEQRAQARSRKDWAAADAVRDQLKQAGVVVEDTPQGP 463
Query: 450 NGQRM 454
Sbjct: 464 RWTIG 468
>gi|255327696|ref|ZP_05368762.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
gi|255295370|gb|EET74721.1| cysteine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
Length = 472
Score = 340 bits (872), Expect = 3e-91, Method: Composition-based stats.
Identities = 161/484 (33%), Positives = 238/484 (49%), Gaps = 44/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y++ I EF+ + P R+Y CG TV H+G+ R +VFD L R +RY
Sbjct: 1 MTMRFYDSASATIREFEPVVPGEARIYYCGATVQGEPHLGHIRSALVFDQLSRWMRYRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQE----HPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
VT VRN+TDIDDKI+ ++ N+ + + + F + L
Sbjct: 60 -LKVTTVRNVTDIDDKILAKSADSMEPGFEGEFPNEQWWALAYRFEKVFAQAYAALGIDP 118
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT HIP+M LIQ++I GHAY + ++ FD S YG+ + + +++ +
Sbjct: 119 PTYEPRATGHIPEMFALIQHLIDRGHAYPALDDSGDVYFDVRSWDKYGALTNQSVEDMQD 178
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK EP WESPWGRGRPGWH+ECSAM+ YLG FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTASWESPWGRGRPGWHLECSAMAGKYLGSRFD 237
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A + AN W+HNG + EG KMSKS GN I+ ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPAQML 295
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------- 345
+ + V+R + HYR +D+ L EA + + +
Sbjct: 296 QMAR-------PLVVRYYLGSAHYRSILDYRPSSLQEAATAIERVEAFLAATQDVLKPGR 348
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTK-------NHDLLPIFNASAHILGI---- 394
+ A A+ +D+N A+ LH+ R + A A +LG+
Sbjct: 349 EVPQAFAEAMDDDVNIPRALAVLHEQTRAGNAALAAGEDASEAANAVMAMAEVLGLAQLM 408
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E ++ + I+ ++ ER K ++ AD +R L S G ++D N +
Sbjct: 409 SFNAEGTSGAEHEALDALIQAVLAERADARAQKDWAKADAMRDLLASAGVQVKDGANGSS 468
Query: 451 GQRM 454
Sbjct: 469 WSVG 472
>gi|126728611|ref|ZP_01744426.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
gi|126710541|gb|EBA09592.1| Cysteinyl-tRNA synthetase, class Ia [Sagittula stellata E-37]
Length = 511
Score = 340 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 201/497 (40%), Positives = 264/497 (53%), Gaps = 52/497 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R F IDP N+RMYVCGPTVYD AH+GNARP++VFDVLYRLLR+ YG
Sbjct: 10 EIRLTNTRNRAKEVFVPIDPENVRMYVCGPTVYDRAHLGNARPVLVFDVLYRLLRHVYGA 69
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A ++ + D I T + ++KD L L P
Sbjct: 70 DHVTYVRNFTDVDDKINATALARKEAGADGTLEDLIRERTEETISWYLKDMGELGALEPD 129
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT +I M+ +I+ +I GHAY A ++F S YG S R +D+ G RV
Sbjct: 130 RMPRATEYIAPMVAMIEGLIESGHAYAAEGHVLFRVRSYEAYGKLSGRSVDDMMAGARVE 189
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK S+ PGW+SPWGRGRPGWHIECSAMS G FDIHGGG DL
Sbjct: 190 VAPYKEDPMDFVLWKPSSDELPGWDSPWGRGRPGWHIECSAMSYELFGSSFDIHGGGNDL 249
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSCCA A +W+HN L +EGRKMSKS GNF T+ +LL+ +
Sbjct: 250 MFPHHENEIAQSCCAHPEGDFAKVWMHNEMLQVEGRKMSKSLGNFFTVRDLLD------Q 303
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------IIDPAVLS 353
P VIR ML THYR+P+D+T ++ EA+ L+ W G D V+S
Sbjct: 304 GVPGEVIRFVMLSTHYRKPMDWTAEKAREAKRKLAYWRALLKEAGVEGVDSTAADLGVVS 363
Query: 354 ALYNDLNTVSAIQALHKLARESTKN---------------------HDLLPIFNASAHIL 392
L DLNT A+ L +A +L +SA++L
Sbjct: 364 DLAEDLNTKPALDKLGSIADYLKSALVSEKQRSSGDLNVPESSENSAELAKRLKSSANLL 423
Query: 393 GI------EVCKEHLNKNISIAIEKLVQERLILLK--------MKK-FSSADYIRKQLES 437
G+ + ++ + ++S KLV R L K+ F D + L +
Sbjct: 424 GLLQDELADWFEDQVFFDLSDFSSKLVNLRAEALAKVQEPGADKKECFRELDRFKSALLN 483
Query: 438 KGFILEDYKNPDNGQRM 454
G + K
Sbjct: 484 AGVEVRMSKAGVELVPG 500
>gi|313835565|gb|EFS73279.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA2]
Length = 476
Score = 340 bits (871), Expect = 3e-91, Method: Composition-based stats.
Identities = 156/491 (31%), Positives = 225/491 (45%), Gaps = 60/491 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT I F+ + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 1 MTLKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT V N+TDIDDKI+ ++ + L C PT++
Sbjct: 61 Q--VTVVANVTDIDDKILAKSAATGT------PWWAHAYHYENELHAAYKALGCRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+MI L++ +I GHAY A ++ FD + P YG S ++DE
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P F LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRGFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQS A A W+HN ++ + G KMSKS GN + E+
Sbjct: 232 GIDLRFPHHENELAQSAAAG--RPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEVT---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTV------QRLTEAEILLSKWPQTSTSKG----- 345
+++ +R +L HYR I+F+ L EA + + G
Sbjct: 286 ---KAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAH 390
+ A ++A+ +DL T A+ AL E K+ L A
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402
Query: 391 ILGIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ G++ + + ++++R K +++AD IR L + G
Sbjct: 403 VFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462
Query: 441 ILEDYKNPDNG 451
+ED +
Sbjct: 463 TIEDTPAGAHW 473
>gi|76789524|ref|YP_328610.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
gi|237803212|ref|YP_002888406.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
gi|237805133|ref|YP_002889287.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
gi|76168054|gb|AAX51062.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis A/HAR-13]
gi|231273433|emb|CAX10348.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/TZ1A828/OT]
gi|231274446|emb|CAX11241.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis B/Jali20/OT]
gi|296436332|gb|ADH18506.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9768]
gi|296438191|gb|ADH20352.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11074]
gi|297140692|gb|ADH97450.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/9301]
Length = 497
Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats.
Identities = 159/495 (32%), Positives = 239/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 21 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 80 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 131
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 424
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481
Query: 439 GFILEDYKNPDNGQR 453
GF +ED K ++
Sbjct: 482 GFAIEDGKTGMKVKK 496
>gi|255507398|ref|ZP_05383037.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D(s)2923]
gi|289525826|emb|CBJ15307.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis Sweden2]
gi|296435406|gb|ADH17584.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/150]
gi|296439123|gb|ADH21276.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis E/11023]
Length = 497
Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats.
Identities = 159/495 (32%), Positives = 239/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 21 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 80 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 131
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDA 424
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481
Query: 439 GFILEDYKNPDNGQR 453
GF +ED K ++
Sbjct: 482 GFAIEDGKTGMKVKK 496
>gi|255349180|ref|ZP_05381187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70]
gi|255503717|ref|ZP_05382107.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 70s]
Length = 500
Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats.
Identities = 159/495 (32%), Positives = 239/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 24 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 82
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 83 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 134
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 135 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 194
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 195 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 254
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 255 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 309
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 310 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 367
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 368 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQIETDSSVFSKQDA 427
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 428 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 484
Query: 439 GFILEDYKNPDNGQR 453
GF +ED K ++
Sbjct: 485 GFAIEDGKTGMKVKK 499
>gi|332295578|ref|YP_004437501.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
gi|332178681|gb|AEE14370.1| cysteinyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
Length = 489
Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats.
Identities = 180/502 (35%), Positives = 254/502 (50%), Gaps = 66/502 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+I +YNTL ++ F I+ IRMYVCG TVYD+ H+G+ R +V+DV RL
Sbjct: 3 NNQIYLYNTLTKRKELFVPIENKKIRMYVCGVTVYDYCHLGHGRSYVVWDVWKRLFLSQG 62
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V +++N TDIDDKII+R+R+E +T+K + +D +L L T
Sbjct: 63 FE--VFHIQNFTDIDDKIIKRSREEKVD------WKELTNKFIDAYFEDMDKLNVLRATL 114
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT++I +MI +I +I G+AY+A +I+F +YG S + ID+ RV
Sbjct: 115 YPKATDYIDEMIKIITGLIEKGYAYKAGGDIVFSIKKFKDYGKLSGKSIDDLIENYRVDS 174
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K++P DF+LWK S P EP W+SP+G+GRPGWHIECSAMS + G FDIH GG DLI
Sbjct: 175 SSYKESPLDFVLWKTSKPDEPFWDSPFGKGRPGWHIECSAMSLKHFGSPFDIHAGGQDLI 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS +K N W+HNGF+ + G KMSKS GNF T+ ++ +
Sbjct: 235 FPHHENEIAQSEGFTG-KKFVNYWLHNGFVTISGEKMSKSLGNFKTLRDI-------YQQ 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDPAV 351
+ V+RL +L +HYR P+ F ++ L A+ K K
Sbjct: 287 YDPMVLRLFILSSHYRSPVVFNLENLMAAKEAWDKIKNAIDVCSSFGLIGELKAAPPSNF 346
Query: 352 LSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIF-------NASAHILGIE 395
++AL +DLNT AI + + R DL + ILG++
Sbjct: 347 IAALCDDLNTPLAISYIFEKVRFINSIVDSYSKSQAADLKNAISFNINEVLSMIEILGLK 406
Query: 396 VC-------KEHLNKNISI----AIE-------------KLVQERLILLKMKKFSSADYI 431
KE L+K + KL+ R L K K + +AD I
Sbjct: 407 YKPDVLFYSKEQLSKEFDSYELTEVNLELFDELTTENMFKLLSFREFLKKKKLYDNADKI 466
Query: 432 RKQLESKGFILEDYKNPDNGQR 453
R L KG +LED ++
Sbjct: 467 RNFLNKKGIVLEDLPGGIRAKK 488
>gi|315104398|gb|EFT76374.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA2]
Length = 490
Score = 340 bits (871), Expect = 4e-91, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 227/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 18 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 76 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRV-DEMSPAEDSDP 188
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 189 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 249 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 299
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 300 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLVGEQVT 359
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A ++A+ +DL T A+ AL E K+ + L A + G
Sbjct: 360 ASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + + ++++R K +++AD IR L + G +E
Sbjct: 420 LDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGLTIE 479
Query: 444 DYKNPDNG 451
D +
Sbjct: 480 DTPAGAHW 487
>gi|300870684|ref|YP_003785555.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
gi|300688383|gb|ADK31054.1| cysteinyl tRNA-synthetase [Brachyspira pilosicoli 95/1000]
Length = 469
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 167/490 (34%), Positives = 248/490 (50%), Gaps = 54/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK YN+L R+ EF+ ++ + MY CGPTVY++AHIGN R I D++ R+L Y
Sbjct: 1 MIKFYNSLTRQKEEFKPMNEKEVGMYSCGPTVYNYAHIGNFRAYIFSDLVRRVLEDYGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N+TD+DDK I +++ H S+ S T K F +D L T P
Sbjct: 60 -NVKLVMNLTDVDDKTIRNSKENHISL------SEYTKKYKDAFFEDIKTLRIKPATVNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK---IDEQKMGTRVP 180
AT HI +MI +I+ + +GH YEA+ I F S+ P YG + + E G
Sbjct: 113 SATEHINEMIDIIKLLEKNGHTYEADGSIYFKISTFPEYGELANLDKQELKEGASGRVSS 172
Query: 181 EKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
++Y K+N +DF+LWK T + W+SP+G+GRPGWHIECSAMS YLGK FDIH GG+
Sbjct: 173 DEYDKENASDFVLWKAYTEEDGDVYWDSPFGKGRPGWHIECSAMSCKYLGKHFDIHTGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
D FPHHENEIAQ+ A EK N W+H L ++G KMSKS GNF T+ +LL
Sbjct: 233 DNKFPHHENEIAQNEAAFN-EKFVNYWLHCEHLIVDGEKMSKSKGNFYTLRDLLN----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------------TS 341
+ A IR +++ +HYR+ ++FT++ + +++ + +
Sbjct: 287 -KGLSAEAIRYSLMNSHYRKQLNFTIEGINQSQSAIDRVNDLIFRLKDVNKTDADDSAVM 345
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
+ ++Y+DLN A+ + + D ++ +I+
Sbjct: 346 KELEEANKNFFESIYDDLNVSEALGVFFSFIKSINISFDSINVSSRDAIIKFIERVNNII 405
Query: 393 GIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++ + + I KL++ER + K K + AD IR +L S G + D N
Sbjct: 406 NCFNMNGEKEIESSEEEKINKLIEERTLAKKEKNYKRADEIRDELNSMGIEIMDTPN--- 462
Query: 451 GQRMTRWKQK 460
RWK+K
Sbjct: 463 ---GVRWKRK 469
>gi|330470432|ref|YP_004408175.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
gi|328813403|gb|AEB47575.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
Length = 471
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 162/485 (33%), Positives = 233/485 (48%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + + +Y+CG T+ HIG+ R + +DVL R L
Sbjct: 1 MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAAGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT++RN+TDIDDKI+ +A+++ I N + + L L PT++
Sbjct: 61 E--VTFIRNVTDIDDKILIKAQEQ------ERPFWSIAYANELKLAEAYRALNVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+M LI +I GHAY + ++ FD S P YG+ S + DE +
Sbjct: 113 PRATGHIPEMHQLIAQLIERGHAYPATDDSGDVYFDVRSWPAYGALSNQSPDEMQSAADA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK P EP W SPWG GRPGWHIECSAM YLG FDIHGG
Sbjct: 173 -PERGKRDPRDFALWKGVKPGEPADAYWPSPWGLGRPGWHIECSAMCWRYLGAEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDLIFPHHENE+AQS AD A W+H+G L + G KM KS GN L+
Sbjct: 232 GLDLIFPHHENELAQSQAAD--LPFARYWVHHGLLGIGGTKMGKSLGN------ALDLAY 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGII 347
G +R + HYR ID++ + L EA + + G +
Sbjct: 284 VAGLGVRPVELRYYYVAAHYRSRIDYSEEALREAAVAYRRIEGFVQRSVERVGVGQLGEV 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
A +A+ +DLNT +A+ LH + R+ L A ILG++
Sbjct: 344 PAAFAAAMDDDLNTSAALAVLHDVLRDGNNALAGGDDVTVRTALASVRAMLDILGVDPLD 403
Query: 399 EHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + +++R K +++AD +R QL+ G ++ED
Sbjct: 404 PAWTGGARASDLRGVVDSLVALALEQRAQARVRKDWAAADALRDQLKRAGVVVEDTPQGP 463
Query: 450 NGQRM 454
Sbjct: 464 RWTIG 468
>gi|161524376|ref|YP_001579388.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189350869|ref|YP_001946497.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|229558623|sp|A9AHN6|SYC_BURM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160341805|gb|ABX14891.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189334891|dbj|BAG43961.1| cysteinyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
Length = 465
Score = 339 bits (870), Expect = 4e-91, Method: Composition-based stats.
Identities = 178/486 (36%), Positives = 246/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIDAMHEDEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT AI L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|289426643|ref|ZP_06428372.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
gi|295129940|ref|YP_003580603.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
gi|289160138|gb|EFD08313.1| cysteine--tRNA ligase [Propionibacterium acnes J165]
gi|291375451|gb|ADD99305.1| cysteine--tRNA ligase [Propionibacterium acnes SK137]
gi|332674781|gb|AEE71597.1| cysteine--tRNA ligase [Propionibacterium acnes 266]
Length = 499
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 226/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 27 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 84
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 85 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 138
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 139 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRV-DEMSPAEDSDP 197
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 198 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 257
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 258 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 308
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 309 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 368
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A + A+ +DL T A+ AL E K+ + L A + G
Sbjct: 369 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 428
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + ++ ++ +R K +++AD IR L + G +E
Sbjct: 429 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 488
Query: 444 DYKNPDNG 451
D +
Sbjct: 489 DTPTGAHW 496
>gi|150019973|ref|YP_001305327.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
gi|187631644|sp|A6LJ41|SYC_THEM4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|149792494|gb|ABR29942.1| cysteinyl-tRNA synthetase [Thermosipho melanesiensis BI429]
Length = 469
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 161/481 (33%), Positives = 226/481 (46%), Gaps = 44/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I I NT K + P ++MYVCGPTVY++ HIGNARP +VFD R L Y
Sbjct: 1 MAIYITNTESGKKEKLVPNTPGVVKMYVCGPTVYNYIHIGNARPAVVFDAFRRFLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V+N TDIDDKII A + ++ KD L A
Sbjct: 61 --KVVMVQNFTDIDDKIINEANA------WGVNFKDVADTFIAEYWKDAENLGIRAANFH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+++ +++ ++ +I +AY N ++ F +YG S +K+++ G RV
Sbjct: 113 PRTTDYVKEIVEAVEKLIAKNYAYVADNGDVYFSVKEFKDYGKLSGKKLEDLVAGARVEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKNP DF LWK P EP W+SPWG GRPGWHIECS MS LG FDIH GG DLI
Sbjct: 173 SELKKNPLDFALWKAVKPGEPSWDSPWGNGRPGWHIECSVMSQRLLGDSFDIHAGGEDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE+E AQS + A W+HNG + G KMSKS GN + E + +
Sbjct: 233 FPHHEDEKAQSEALTG-KPFAKYWMHNGMIITRGDKMSKSIGNVFLVREAV-------KR 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQTSTSKG 345
+ ++L +L HYR PI+F+ + + + + P+ T
Sbjct: 285 YGKDAVKLFLLSKHYRTPIEFSHEIMFNTKKAALRILNTLNRFEEKYPYPLVPKRDTFMN 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------SAHILGI- 394
++ + AL +D NT I + +L+++ K D A +LGI
Sbjct: 345 DMEARFVEALEDDFNTPRVIALIFELSKDLNKAMDEGKEEEALKRYHLITRVFGSVLGIF 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
E + + N IE+++ R L K K ++ AD IR L G + D +
Sbjct: 405 ERGLKVVETNNQKIIEEILSVRQELRKEKDYNVADKIRDALLRAGVKILDTSEGTKWEMN 464
Query: 455 T 455
T
Sbjct: 465 T 465
>gi|108801700|ref|YP_641897.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119870851|ref|YP_940803.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
gi|123368663|sp|Q1B2P3|SYC_MYCSS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|187629832|sp|A1UMF5|SYC_MYCSK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|108772119|gb|ABG10841.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119696940|gb|ABL94013.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
Length = 481
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 151/474 (31%), Positives = 228/474 (48%), Gaps = 46/474 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T+ + +F + ++ +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 17 LRLYDTMTGAVRDFVPLRDGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGLD- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 76 -VAFIRNVTDIDDKILNKAADAG------RPWWEWAATYERAFSAAYDALGVLPPSAEPR 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QM+ LI+ +I GHAY + ++ F+ +++P+YG S +ID+ G V
Sbjct: 129 ATGHITQMVELIERLIDRGHAYTGDGDVYFNVATLPDYGKLSGHRIDDVHQGEGVATG-- 186
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL+FPH
Sbjct: 187 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDLVFPH 246
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 247 HENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVRAAE----- 299
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILL---------SKWPQTSTSKGIIDPAVLSAL 355
+R + HYR ++F+ L +A + + G P +AL
Sbjct: 300 --LRYYLGSAHYRSMLEFSETALQDAVKAYAGVEDFLHRVRTRVGTVVPGDWTPKFAAAL 357
Query: 356 YNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNKNIS 406
+DL+ A+ +H + D A ILG + E
Sbjct: 358 DDDLSVPIALAEVHAARAVGNRALDSGDHETAMTQARSIRAMMGILGCDPLDERWESRDE 417
Query: 407 -----IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
AI+ L + R K +++AD IR +L+ G + D +
Sbjct: 418 TSAALAAIDVLVRWALDSRADARNRKDWATADQIRDRLKEAGIEVTDTADGPQW 471
>gi|309812587|ref|ZP_07706332.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
gi|308433438|gb|EFP57325.1| cysteine--tRNA ligase [Dermacoccus sp. Ellin185]
Length = 483
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 154/489 (31%), Positives = 238/489 (48%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R++ +F+ ++P + +Y+CG T HIG+ R + FDVL L
Sbjct: 1 MSLQIFDTATRELRDFEPVEPGKVGIYICGLTTQGSPHIGHLRFAVAFDVLRNWLT-RGH 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ ++ + + + + ++ L PT++
Sbjct: 60 GYDVTLVRNVTDIDDKILRKSAEAG------EPWFAWSYLHERETSDALDILGVQRPTYE 113
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+ M+ L++ +I GHAY A + ++ FD S YG+ +R+K+D+ +
Sbjct: 114 PRATGHVTDMVELMELLIERGHAYPAADGSGDVYFDVKSFDEYGALTRQKLDDMEDAADA 173
Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W +PWG GRPGWH+ECSAM+ +LG FDIHGG
Sbjct: 174 DPR-AKRDPRDFALWKGRKADEPASANWPTPWGEGRPGWHLECSAMARRWLGDTFDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE AQS A A W+HNG++ L G KMSKS GN +++ EL +T +
Sbjct: 233 GIDLRFPHHENEQAQSRAAGLG--FARYWMHNGWVTLSGEKMSKSLGNTLSVTELTKTVR 290
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTST 342
V+R + HYR I++T L EA + +
Sbjct: 291 -------PLVLRYYLGSVHYRSTIEYTSDSLAEANAAVERIEGFLRRALGEDAVLTSADL 343
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILG 393
+ + A ++ + +DLN A+ A RE D + A +LG
Sbjct: 344 ADVELPEAFVATMDDDLNVSGALAACFDAIREGNTAIDEADVRRVEELALQVAAMTDVLG 403
Query: 394 IEVCKEHLNKN-----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ + N + ++ LV++R K F++AD IR QL G ++
Sbjct: 404 VNPLDPKWSGNGSADGDETKRALGALVDALVEQRKTARAAKDFATADIIRDQLADAGVVV 463
Query: 443 EDYKNPDNG 451
ED +
Sbjct: 464 EDTPDGARW 472
>gi|221198382|ref|ZP_03571428.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221208941|ref|ZP_03581938.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221171224|gb|EEE03674.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221182314|gb|EEE14715.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD2M]
Length = 465
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 178/486 (36%), Positives = 246/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIDAMHEDEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWSEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASA-----------HILG 393
+A+ +D NT AI L +LA E + D L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRDASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|313765525|gb|EFS36889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA1]
gi|313772927|gb|EFS38893.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL074PA1]
gi|313793050|gb|EFS41117.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA1]
gi|313802500|gb|EFS43722.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL110PA2]
gi|313806517|gb|EFS45024.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA2]
gi|313811065|gb|EFS48779.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA1]
gi|313814433|gb|EFS52147.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA1]
gi|313815074|gb|EFS52788.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA1]
gi|313817384|gb|EFS55098.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA2]
gi|313821872|gb|EFS59586.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA1]
gi|313824232|gb|EFS61946.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA2]
gi|313826599|gb|EFS64313.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA1]
gi|313828596|gb|EFS66310.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL063PA2]
gi|313831829|gb|EFS69543.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL007PA1]
gi|313834628|gb|EFS72342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL056PA1]
gi|313840141|gb|EFS77855.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL086PA1]
gi|314915835|gb|EFS79666.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA4]
gi|314917110|gb|EFS80941.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA1]
gi|314921385|gb|EFS85216.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL050PA3]
gi|314926686|gb|EFS90517.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL036PA3]
gi|314931295|gb|EFS95126.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL067PA1]
gi|314954883|gb|EFS99289.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA1]
gi|314958817|gb|EFT02919.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA1]
gi|314961109|gb|EFT05210.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA2]
gi|314964465|gb|EFT08565.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL082PA1]
gi|314969564|gb|EFT13662.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL037PA1]
gi|314974629|gb|EFT18724.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA1]
gi|314977177|gb|EFT21272.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL045PA1]
gi|314980410|gb|EFT24504.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA2]
gi|314985726|gb|EFT29818.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA1]
gi|314987251|gb|EFT31342.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA2]
gi|314988860|gb|EFT32951.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL005PA3]
gi|315078520|gb|EFT50551.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL053PA2]
gi|315082016|gb|EFT53992.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL078PA1]
gi|315082488|gb|EFT54464.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL027PA2]
gi|315086199|gb|EFT58175.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL002PA3]
gi|315087784|gb|EFT59760.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL072PA1]
gi|315097463|gb|EFT69439.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL038PA1]
gi|315099913|gb|EFT71889.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL059PA2]
gi|315101774|gb|EFT73750.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL046PA1]
gi|315110268|gb|EFT82244.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA2]
gi|327331451|gb|EGE73190.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA2]
gi|327333438|gb|EGE75158.1| cysteine--tRNA ligase [Propionibacterium acnes HL096PA3]
gi|327445542|gb|EGE92196.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL013PA2]
gi|327447161|gb|EGE93815.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA1]
gi|327449804|gb|EGE96458.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL043PA2]
gi|327454653|gb|EGF01308.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA3]
gi|327456727|gb|EGF03382.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL083PA2]
gi|327457001|gb|EGF03656.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL092PA1]
gi|328755708|gb|EGF69324.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL087PA1]
gi|328756487|gb|EGF70103.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL025PA2]
gi|328758784|gb|EGF72400.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL020PA1]
gi|328761794|gb|EGF75307.1| cysteine--tRNA ligase [Propionibacterium acnes HL099PA1]
Length = 490
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 226/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 18 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 76 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRV-DEMSPAEDSDP 188
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 189 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 249 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 299
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 300 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 359
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A + A+ +DL T A+ AL E K+ + L A + G
Sbjct: 360 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + ++ ++ +R K +++AD IR L + G +E
Sbjct: 420 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 479
Query: 444 DYKNPDNG 451
D +
Sbjct: 480 DTPTGAHW 487
>gi|297526293|ref|YP_003668317.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255209|gb|ADI31418.1| cysteinyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 480
Score = 339 bits (870), Expect = 5e-91, Method: Composition-based stats.
Identities = 173/498 (34%), Positives = 231/498 (46%), Gaps = 64/498 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+IK+YNTL RKI EF+ + P ++MYVCGPTVYD+ HIG+ R +V+D L R
Sbjct: 6 EIKLYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYFALRGY- 64
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V NITDIDDKII RA +E + T+ +++ +L P
Sbjct: 65 -HVIHVMNITDIDDKIINRANREKRD------WREVAETYTRDYLESLRKLNVK-VDLHP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T HI ++I IQ +I G+AY + + F+ P YG S R E +
Sbjct: 117 RVTEHIKEIIEFIQTLIDKGYAYIAPSGSVYFEVDKYPEYGELSGRTNKELWSQEKEFIS 176
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK P DF LWK P EP WE+PWGRGRPGWHIECS MSS YLGK FDIHGGG DLIF
Sbjct: 177 E-KKKPYDFALWKAWKPGEPYWEAPWGRGRPGWHIECSVMSSRYLGKQFDIHGGGTDLIF 235
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A ++ W+H G + + KMSKS GN I + E + W
Sbjct: 236 PHHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF-------KEW 288
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+RL L +HYR P+ FT + + + + + + +
Sbjct: 289 GPETLRLWYLTSHYRRPLVFTEESIKQTQKYYERLVSVTNTIKKLSREAVGLHRMNDEDL 348
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
I AL ND NT A+ + + K +
Sbjct: 349 KILDKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLLREF 408
Query: 389 AHILGIEVC-----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+LG+ E L + I +V R L + K + AD IR +L G IL
Sbjct: 409 NIVLGVLDKYLAETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRAELGKHGIILM 468
Query: 444 DYKNPDNGQRMTRW-KQK 460
D + T W ++K
Sbjct: 469 DRG------KETTWMRRK 480
>gi|126696668|ref|YP_001091554.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|187629842|sp|A3PDX8|SYC_PROM0 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126543711|gb|ABO17953.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 489
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 177/509 (34%), Positives = 249/509 (48%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL ++I F+ ID +++Y CG TVYD H+G+AR I +DVL R L Y +
Sbjct: 1 MIKLFNTLSKRIEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESIS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RATNHI + LI + G+AY + ++ + NYG S + I+EQ + +
Sbjct: 112 RATNHICNICDLITILEDKGYAYSRDGDVYYSVFKNQNYGKLSNQNIEEQNINQQGRMAN 171
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 EENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+ +
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELINS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGI 346
+R ++ +YR+P+DFT + L A
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGSLNSIDKNEP 344
Query: 347 IDPAVLSALY---------------NDLNTVSAIQALHKLAR-----------------E 374
I+ + NDLNT SAI ++ LA+ +
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTASAIAIIYDLAKPLKNFLNQFQRVEGFKID 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ LL F +LG++ I I L+ ERL K K ++ AD
Sbjct: 405 QNEKFFLLENFKTLEKLTEVLGLKKEVLVKESKITEEEISTLINERLKAKKEKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L+ KG L D + +T W +
Sbjct: 465 IRSLLKEKGIELID-----QSKEITTWIR 488
>gi|50841867|ref|YP_055094.1| cysteinyl-tRNA synthetase [Propionibacterium acnes KPA171202]
gi|61216186|sp|Q6AAT0|SYC_PROAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|50839469|gb|AAT82136.1| tRNA synthetase [Propionibacterium acnes KPA171202]
gi|315106472|gb|EFT78448.1| cysteinyl-tRNA synthetase [Propionibacterium acnes HL030PA1]
Length = 490
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 227/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 18 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 76 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 130 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGIRV-DEMSPAEDSDP 188
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 189 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 248
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 249 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 299
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 300 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTMGSLDEATKAIERIDSFLDRASNLVGEQVT 359
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A ++A+ +DL T A+ AL E K+ + L A + G
Sbjct: 360 ASHELSEAFVTAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 419
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + + ++++R K +++AD IR L + G +E
Sbjct: 420 LDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGLTIE 479
Query: 444 DYKNPDNG 451
D +
Sbjct: 480 DTPAGAHW 487
>gi|221214717|ref|ZP_03587686.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221165256|gb|EED97733.1| cysteinyl-tRNA synthetase [Burkholderia multivorans CGD1]
Length = 465
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 178/486 (36%), Positives = 246/486 (50%), Gaps = 49/486 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAI 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIDAMHEDEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATQFIPQMLGMIERLEANGYAYQATDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ +P WES +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKADDPEGASWESKYGMGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNGF+ ++ KMSKS GNF TI E+LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWLHNGFVQVDNEKMSKSLGNFFTIREVLER-- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 289 -----YDAEVMRFFIVRTHYRSPLNYSDVHLDDARASLTRLYTALKDVEPDALALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPIFNASA-----------HILG 393
+A+ +D NT AI L +LA E +N L A L
Sbjct: 344 HAQRFAAAMNDDFNTPVAIATLFELAGEVNRTRNASLARQLKQLAGLLGLLGREPRAFLQ 403
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
IE + R + K ++ AD IR +L G LED
Sbjct: 404 QASGAAQAGALSVDEIEAKIAARAAAKRAKDYAEADRIRAELLDAGVALEDKPGGS---- 459
Query: 454 MTRWKQ 459
T W++
Sbjct: 460 -TEWRR 464
>gi|288923576|ref|ZP_06417688.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
gi|288345075|gb|EFC79492.1| cysteinyl-tRNA synthetase [Frankia sp. EUN1f]
Length = 493
Score = 339 bits (869), Expect = 6e-91, Method: Composition-based stats.
Identities = 148/507 (29%), Positives = 227/507 (44%), Gaps = 75/507 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R++ F + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MGLRLYDTRTRRVRPFVPLRPGHVGVYVCGPTVQSPPHVGHIRTGLAFDLLRRWLTQSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N+TDIDDKII A Q ++ + ++ T+ F + + L PT
Sbjct: 60 -LSVTFVQNVTDIDDKIIINADQAGTTV------WELATRQTRAFDEAYRAVGVLPPTIS 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT HIP+M+ +I ++ G AY + F + +YG+ S ++ +
Sbjct: 113 PLATGHIPEMLEMISVLVERGFAYPGAGSVWFRVGAFADYGALSHQRPASM--HPSPEAE 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK P EP W SPWG GRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAVKPGEPSWSSPWGPGRPGWHLECSAMAGKYLGGVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
PHHENE AQ+ CA + AN W+H G L G KMSKS GN + + L +
Sbjct: 231 PHHENERAQTVCAAGGPAGGEMANYWMHIGLLTTGGTKMSKSLGNSFFVTDALAAVR--- 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------- 344
V+R +L HYR ++++ Q L E+ + +
Sbjct: 288 ----PQVLRYHLLSAHYRSSLEYSPQTLDESGAAHDRVETFVRNALDILGGPAEAAALAG 343
Query: 345 -------------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
++ +A+ +DL A+ AL +
Sbjct: 344 TEAGLAGSVGPGTVAGAAAEGDLTPELVWSEFAAAMDDDLAIGRALAALFGAVSRGNQVL 403
Query: 380 DLL---------PIFNASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKK 424
+ +LG++ ++ L + + L+ R +
Sbjct: 404 SKAHSRELAGWVEVTRRMLTVLGLDPVEQWPTAGAELRPALDSVMGILLDLRSSARARRD 463
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
++ AD IR +L + G ++ED
Sbjct: 464 YTEADSIRSRLAASGVVIEDTPEGQRW 490
>gi|289424245|ref|ZP_06426028.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
gi|289154942|gb|EFD03624.1| cysteine--tRNA ligase [Propionibacterium acnes SK187]
Length = 486
Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 226/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 14 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 71
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 72 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 125
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 126 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRV-DEMSPAEDSDP 184
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 185 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 244
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 245 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 295
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 296 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 355
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A + A+ +DL T A+ AL E K+ + L A + G
Sbjct: 356 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 415
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + ++ ++ +R K +++AD IR L + G +E
Sbjct: 416 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 475
Query: 444 DYKNPDNG 451
D +
Sbjct: 476 DTPTGAHW 483
>gi|223939279|ref|ZP_03631160.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
gi|223892111|gb|EEF58591.1| cysteinyl-tRNA synthetase [bacterium Ellin514]
Length = 471
Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats.
Identities = 164/487 (33%), Positives = 238/487 (48%), Gaps = 53/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++NTL R + EF +DP + +Y CGPTV+D AHIGN R + D+L R L +
Sbjct: 1 MALKLFNTLSRSVEEFVPLDPAGKRVGLYCCGPTVHDSAHIGNFRTFVFADLLRRYLEFR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +V NITD++DKII R R N + TSK F D L CL P+
Sbjct: 61 GY--AVQHVMNITDVEDKIIARVR------TANTTLKEYTSKYEAAFFADLKSLGCLPPS 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTS----SIPNYGSFSRRKIDEQKM 175
+ PRAT I ++I LI+ +I G AY+ + + F YG + +E ++
Sbjct: 113 NTPRATEFIGEIISLIEKLIERGIAYKAPDGSVYFSIDKYRGCGCTYGQLLKLNFEEMRV 172
Query: 176 GTRVPEKYH-KKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
G RV + K++ ADF LWK P + W SPWG GRPGWHIECSAMS LG FD
Sbjct: 173 GERVKSDEYAKESVADFALWKARVPEDGTVFWPSPWGEGRPGWHIECSAMSMKLLGPSFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
+H GG DLIFPHHE+EIAQS A ++ W+H L +EG+KMSK GNF +
Sbjct: 233 LHLGGEDLIFPHHEDEIAQSEGAGLQPSGQRFVKHWMHGAHLLVEGKKMSKRLGNFFVLG 292
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------ 343
+L + + IR +L +HYRE +FT+ L A L++ +
Sbjct: 293 DLTA------KGFTGREIRYLLLTSHYRETFNFTLDGLQGARTALARIDECLIKLKETAG 346
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FN 386
+ A AL DLN A A+ + ++ ++ + +
Sbjct: 347 STQASADEKMVNAFTQALDKDLNIAGAWGAIFEWVSDTNRHLAENSLTPQQAAAALAAWQ 406
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+LG+ ++ + I L++ R K K F +D IR +L++KG+++ED
Sbjct: 407 KIDAVLGVGA---NVEAEVPAEIAALLEARQAARKAKDFKRSDAIRDELKAKGWVIEDTP 463
Query: 447 NPDNGQR 453
+R
Sbjct: 464 KGPRLKR 470
>gi|163857764|ref|YP_001632062.1| cysteinyl-tRNA synthetase [Bordetella petrii DSM 12804]
gi|163261492|emb|CAP43794.1| cysS [Bordetella petrii]
Length = 516
Score = 339 bits (869), Expect = 7e-91, Method: Composition-based stats.
Identities = 168/501 (33%), Positives = 237/501 (47%), Gaps = 61/501 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F+ P +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR
Sbjct: 31 MLHIYNTLSRTKEPFKPAQPGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASG-- 88
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L P +P
Sbjct: 89 LKVDYVRNITDIDDKIIRRAVETG------RRIGEVTEYYIAAMHADERALGVQPPDREP 142
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + +G AY + ++ + YG S + +D+ + G RV
Sbjct: 143 RATQYVGEMLDIIGRLEQNGLAYRADDGDVNYAVRGFDGYGKLSGKALDDLRAGERVAVG 202
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP W+SP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 203 SAKRDPLDFVLWKAAKADEPDDTKWQSPYGLGRPGWHIECSAMSRALLGLPLDIHGGGPD 262
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL------- 292
L FPHHENEIAQ+ A AN W+H G L ++ KMSKS GNF TI + +
Sbjct: 263 LKFPHHENEIAQTEGAFG-GVLANTWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGEAPA 321
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
+ ++ A ++R ++ HYR P ++T L +A+ L + Q
Sbjct: 322 DQAEYAVNPREAEMLRFFIVRNHYRSPQNYTPHNLADAQSALDRLYQALLNVAPDDAGLD 381
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP------------------- 383
A +A+ +D NT A+ AL +LA E+ +
Sbjct: 382 WNEPQAQAFKAAMDDDFNTSGAVAALFELASEANRTRSARSAGQLKSLAALLGLLQQDPA 441
Query: 384 -----IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
SA G+ + IE L+ R + + ++ AD IR QL
Sbjct: 442 RYFQCATRYSAA--GLAQAATPSASLDAGQIETLIAARAAAKQARDYAEADRIRAQLREA 499
Query: 439 GFILEDYKNPDNGQRMTRWKQ 459
G L+D T+W++
Sbjct: 500 GIELDDKPGGQ-----TQWRR 515
>gi|326335690|ref|ZP_08201876.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
F0234]
gi|325692119|gb|EGD34072.1| cysteine--tRNA ligase [Capnocytophaga sp. oral taxon 338 str.
F0234]
Length = 494
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 156/493 (31%), Positives = 232/493 (47%), Gaps = 46/493 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++KI+N+L + F + +++ MYVCGPTVY H+GN R + FD +YR L++
Sbjct: 1 MNHQLKIFNSLTGEKEVFVPLHANHVGMYVCGPTVYSNVHLGNVRTFMSFDFVYRALKFL 60
Query: 61 YGEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V YVRNITD DD + R S I K T F K
Sbjct: 61 GY--KVRYVRNITDAGHLTDDGDVNNDRFVKQSRLEKLEPMEIVQKYTVDFHKVLEIFNL 118
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD----TSSIPNYGSFSRRKIDE 172
L PT +P AT HI + I L + ++ G AYE+N + FD NYG SRR I+E
Sbjct: 119 LPPTIEPTATGHILEQIQLTEKLLKDGFAYESNGSVYFDVLEYNRRGLNYGELSRRNIEE 178
Query: 173 QKMGTRVPEKY-HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
TR + K+NP DF LWK+++P W SPWG G PGWH+EC+ MS+ YLG
Sbjct: 179 LFANTRDLDGQGEKRNPQDFALWKKASPAHIMRWASPWGDGFPGWHLECTVMSTKYLGNQ 238
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL FPHHE EIAQ E W+H L + G++MSKS GN+I +
Sbjct: 239 FDIHGGGMDLKFPHHECEIAQGKAGHG-ESPVRYWMHANMLTMNGQRMSKSTGNYILPMQ 297
Query: 291 LLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
L+ F + + V+R + HYR +D + + + AE ++ + + + P
Sbjct: 298 LVSGNNTFFEKPFAPAVVRFCFMQAHYRSVLDISNEAMLAAERGFARLMEAMKTINELTP 357
Query: 350 -----------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS---- 388
AL +D N+ I L + + + + +A+
Sbjct: 358 TSNTPTALTTMIENWKDKCYDALLDDFNSPMLIAHLFEAVKWIFQVKNDEEKISAAELKE 417
Query: 389 ---------AHILGIEVCKEHL--NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG++ ++ N + ++ L+ R K ++ +D IR +L +
Sbjct: 418 LQTLMNAFVFDVLGLQSEEQTNNYNDKLDGVLQLLINMREEARANKDWTLSDKIRNELLT 477
Query: 438 KGFILEDYKNPDN 450
G L+D K +
Sbjct: 478 IGIQLKDGKEGTS 490
>gi|320450390|ref|YP_004202486.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
gi|320150559|gb|ADW21937.1| cysteinyl-tRNA synthetase [Thermus scotoductus SA-01]
Length = 481
Score = 338 bits (868), Expect = 7e-91, Method: Composition-based stats.
Identities = 162/496 (32%), Positives = 242/496 (48%), Gaps = 61/496 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IY+TL+R +F P ++ +YVCGPTVY H+G+AR IV+DVL R L +
Sbjct: 1 MGLRIYDTLQRSKVDFTPATPGHVGIYVCGPTVYSDPHLGHARGPIVYDVLRRYLLHLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI RA+ E + K T + T
Sbjct: 61 --RVRFVSNITDVGHLTDDADQGEDKIERRAKLERLE------PMEVAEKYTWSYFDAIT 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P+ PRA+ HIP+ I L + ++ G AYE + F + P YG S ++++E
Sbjct: 113 ALNVLRPSIAPRASGHIPEQIELTERLLKLGFAYERKGSVYFRVRAFPEYGKLSGKRLEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ G RV + K++P DF LWK + P W+SPWG G PGWHIEC+AMS YLG+ F
Sbjct: 173 LRAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+DL FPHHE EIAQ+ A A W+H+ + LEG KM+KS GN + +++L
Sbjct: 233 DIHAGGIDLQFPHHECEIAQAEAAGYR--FARHWMHHNHVLLEGEKMAKSTGNLVLLHDL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------- 343
L ++ +R +L THYR P+DFT + L A+ ++ Q
Sbjct: 291 L-------KAHEPMALRFYLLQTHYRSPMDFTWEGLEAAKRGYARLLQAYREVRTRLNAA 343
Query: 344 -----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLPIFNASAH 390
++ L A+ +DL+T A+ A E K +A
Sbjct: 344 HPGITPELERALDALEKDFLEAIEDDLSTPEALAAFFTFLPELNKLLPEAKRDTLRRTAQ 403
Query: 391 I---LGIEVCKEHLNKNISIAIE---------KLVQERLILLKMKKFSSADYIRKQLESK 438
+ LG + + + + L++ R + K ++ +D IR++L+S
Sbjct: 404 VFHTLGEGILGLFPERVLEEKVSGPLLEGLVALLLELREEARRAKDYAKSDLIRERLKSL 463
Query: 439 GFILEDYKNPDNGQRM 454
G I+ED K +
Sbjct: 464 GIIVEDTKEGPKWRIG 479
>gi|89069973|ref|ZP_01157305.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
gi|89044421|gb|EAR50552.1| cysteinyl-tRNA synthetase [Oceanicola granulosus HTCC2516]
Length = 469
Score = 338 bits (868), Expect = 8e-91, Method: Composition-based stats.
Identities = 201/454 (44%), Positives = 253/454 (55%), Gaps = 28/454 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++ NT RK+ F IDP+N+RMYVCGPTVYD AH+GNAR +VFD+L+RLLR YG
Sbjct: 4 IQLRNTKSRKVEPFAPIDPTNVRMYVCGPTVYDRAHLGNARSAVVFDMLFRLLRQVYGAD 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRNITD+DDKI RA + I IT + T + D L L PTH+PR
Sbjct: 64 AVTYVRNITDVDDKINARAAETG------RTIRDITEETTGWYRDDMAALGVLRPTHEPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I M +I +I G+AY A ++F S YG S R +D+ G RV +
Sbjct: 118 ATEWIGAMKEMISTLIERGNAYAAEGHVLFAVESDGAYGGLSGRSVDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK S +PGW+SPWGRGRPGWHIECSAMS LG+ FDIHGGG DL+FPH
Sbjct: 178 KRDPMDFVLWKPSADDQPGWDSPWGRGRPGWHIECSAMSYELLGETFDIHGGGNDLMFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS CA A W+HN L +EG+KMSKS GNF T+ +LLE + P
Sbjct: 238 HENELAQSRCAHPEGGFARFWLHNEMLQVEGKKMSKSLGNFFTVRDLLE------QGVPG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYNDLNTV 362
V+RL ML T Y +P+D+T ++ AE L KW + G + VL+AL +DLNT
Sbjct: 292 EVMRLVMLGTQYSKPMDWTEEKRASAEATLRKWRAMTEGVAPGEVAAPVLAALADDLNTA 351
Query: 363 SAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE----------KL 412
AI LHKLA + K + A++ L
Sbjct: 352 GAIAELHKLAAAGDAAGLRASAGLLGLLGDELGDWKWRVVAQDFGAVQYVGDGDEAQGAL 411
Query: 413 ---VQERLIL-LKMKKFSSADYIRKQLESKGFIL 442
V ER K F++AD IR G L
Sbjct: 412 ARGVAERWAACRAEKDFANADRIRSAALEAGIEL 445
>gi|162316926|ref|YP_001102717.2| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|187631653|sp|A4F6W7|SYC_SACEN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 464
Score = 338 bits (868), Expect = 8e-91, Method: Composition-based stats.
Identities = 158/478 (33%), Positives = 230/478 (48%), Gaps = 46/478 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++T R + EF +YVCG TV HIG+ R + +DVL R L +
Sbjct: 1 MSLHLHDTATRTMREFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V VRN+TDIDDKI+ +A + + + F RL CL P+
Sbjct: 61 D--VRLVRNVTDIDDKILTKAADAG------RPWWEWATAHERAFESAFDRLGCLPPSAL 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI QMI L+Q +I GHAY A ++ F +S + + + ++
Sbjct: 113 PRATGHITQMIELMQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLD-EVQQGESTA 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+ECSAMS++YLG FDIHGGGLDL+F
Sbjct: 172 SGKRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A A W+HN ++ + G KMSKS GN + I +L+
Sbjct: 232 PHHENELAQSTAAGDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRAA------ 283
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLS 353
AP IR ++ HYR I+++ L EA + G + +
Sbjct: 284 -APEIRYYLVAPHYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAA 342
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK- 403
A+ +DL+T AI +H RES D ILG++ E
Sbjct: 343 AMDDDLSTPQAIAVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADT 402
Query: 404 ---------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+S + ++Q+R + F++AD +R +L++ G +ED +
Sbjct: 403 RGADDAAHHALSELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 460
>gi|327400878|ref|YP_004341717.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327316386|gb|AEA47002.1| cysteinyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 471
Score = 338 bits (868), Expect = 8e-91, Method: Composition-based stats.
Identities = 170/495 (34%), Positives = 248/495 (50%), Gaps = 67/495 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL ++ E + +R+YVCG T YD++HIG+AR ++FD R L + E
Sbjct: 1 MRLYNTLTKREEELKL--DKTVRIYVCGITAYDYSHIGHARSAVIFDTFRRYLEWKGHE- 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TD+DDKI+ RA E N + K ++ KD L T+ P+
Sbjct: 58 -VIYVQNFTDVDDKIVRRAVAE------NRTQKEVAEKFIAEYFKDMEALNVRKATYHPK 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
T HI +I + +I G+AYE ++ F S +YG S ++E R+
Sbjct: 111 VTEHISDIIQAVSELIKKGYAYEVGGENKDVYFHVPSFSHYGELSGMSLEELN-RHRIEP 169
Query: 182 KYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KK+ DF LWK + + ++SPWG GRPGWHIECS M++ YLG FDIHGGG
Sbjct: 170 DERKKDVKDFALWKAAKEEDIKAKAVFDSPWGLGRPGWHIECSVMAAKYLGIPFDIHGGG 229
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENE AQS IE WIHN F+ ++G KMSKS GN + I ++L
Sbjct: 230 KDLIFPHHENERAQSYALHGIEP-VRYWIHNDFVTIKGEKMSKSLGNIVKIRDVL----- 283
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
+ + V+R +L HYR PID++ + + AE S T
Sbjct: 284 --QKYNGEVLRYFLLSAHYRSPIDYSEESIERAEKAYSALRNTLELIDMEIAAFKTFGGG 341
Query: 341 ------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLP 383
+ + + +SA+ ND NT AI +LH+ + + K +
Sbjct: 342 EGAGELNDATSNLSANFISAMENDFNTPKAIASLHEFSTRTNKAVNKGLAGLEELENAFE 401
Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
F + ++LGI V + + +S + +LV+ER + K F AD IR++L +G++L
Sbjct: 402 TFLSLCNVLGIFVDYQRV-PVLSSELAELVKEREEARREKNFEKADRIREKLRERGYVLI 460
Query: 444 DYKNPDNGQRMTRWK 458
D R TRWK
Sbjct: 461 DT------PRGTRWK 469
>gi|307594505|ref|YP_003900822.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307549706|gb|ADN49771.1| cysteinyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 491
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 175/490 (35%), Positives = 238/490 (48%), Gaps = 50/490 (10%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YNT + + + + P R+YVCG T YD H+G+AR + +D+ R L Y E V
Sbjct: 12 VYNTASKNLEKITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDIFRRYLEYLGVE--V 69
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+V N TDIDDKII RARQE IN + S+ ++F RL P+ T
Sbjct: 70 RFVTNFTDIDDKIINRARQEFGGELINR-WYEVPSRYIKEFFDAMDRLYVKRAYAYPKVT 128
Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+I M+ IQ ++ AY + + FD + +P YG FS +KI++ G RV + K
Sbjct: 129 ENINDMLKWIQELVSKNLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEPGK 188
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
+NP DF LWK + EP W SPW GRPGWH+EC MSS YLG FDIHGGG DLIFPHH
Sbjct: 189 RNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFPHH 248
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIA + I+ A WIH G + + G+KMSKS GN I I E+L R +
Sbjct: 249 ENEIAIARVYFGIDYFARYWIHVGLVTIRGQKMSKSLGNIIPIMEVL-------RKYDGE 301
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------------- 344
V+RL MT YR+P+DF L + L
Sbjct: 302 VLRLYYAMTQYRKPMDFDPDALDQVRNSLMSVYAAYDMLTEAINEAPDTGDRDNELLSKV 361
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARES-------------TKNHDLLPIFNASAHI 391
+ +L ND+NT A+ AL AR + L F+ A+I
Sbjct: 362 NEFVNSFEESLNNDINTSGAVAALMDFARYIASTVIYNTQHYSRNALTNALTAFSDLANI 421
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + + L ++ I+ L++ R L K F AD IR +L G ++ D N
Sbjct: 422 LGI-LNRTRLPPSLVSLIDTLIRIRAQLRARKMFDVADEIRNELSKLGVVVSDVGNKTYW 480
Query: 452 ----QRMTRW 457
++T+W
Sbjct: 481 YIDRDKITQW 490
>gi|145570618|gb|ABP79724.1| cysteinyl-tRNA synthetase [Pseudomonas stutzeri A1501]
Length = 436
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 178/455 (39%), Positives = 243/455 (53%), Gaps = 46/455 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYDF HIG+AR M+ FDV+ R LR+ + VTYVRNITDIDDKII RA +
Sbjct: 1 MYVCGMTVYDFCHIGHARVMVAFDVVTRWLRHRGYD--VTYVRNITDIDDKIIRRASENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + +D TRL L P +PRAT+HI M +IQ +I G AY
Sbjct: 59 ------EPFQALVERMIAAMHEDETRLNVLRPDVEPRATDHIAGMHTMIQTLIDKGFAYA 112
Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N ++ + YG SRRKI++ K+G R+ K++P DF+LWK + P EP W+S
Sbjct: 113 PGNGDVYYRVGKFVGYGKLSRRKIEDLKIGARIEVDEAKEDPLDFVLWKGAKPGEPSWDS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECS MS+ LG+ FDIHGGG DL+FPHHENEIAQS A + AN W+
Sbjct: 173 PWGPGRPGWHIECSVMSTCCLGETFDIHGGGPDLVFPHHENEIAQSEAATG-KLYANAWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G + ++G KMSKS GNF TI E+LE + V+R ++ +HYR PI+++
Sbjct: 232 HAGAVRVDGEKMSKSLGNFFTIREVLE-------KYHPEVVRYLLVSSHYRSPINYSEDS 284
Query: 327 LTEAEILLSKWPQTSTSK--------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
L EA+ L ++ +A+ +D N+ A L ++ RE +
Sbjct: 285 LREAKSALERFYNGLKGLPEAQPAGGDEFVARFAAAMDDDFNSPEACAVLFEMIREVNRL 344
Query: 379 HD--------LLPIFNASAHILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMK 423
+ L A +LG+ + K + +E L+ RL K
Sbjct: 345 READLAAAAALAARLKVLAGVLGVLQLEPDAFLQAGAAGKVDAAEVEALIAARLAARAEK 404
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +D IR QL + G +LED K T W+
Sbjct: 405 NWGESDRIRDQLTAMGVVLEDGK------GGTTWR 433
>gi|262369707|ref|ZP_06063035.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262315775|gb|EEY96814.1| cysteinyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 473
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 187/488 (38%), Positives = 265/488 (54%), Gaps = 57/488 (11%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRVEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--SV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITDIDDKII+RA + ++I+ +T + Q +D L CL P PRAT
Sbjct: 64 KYVRNITDIDDKIIKRANENG------ESITQLTDRFIQAMNEDAENLGCLHPDEAPRAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
++I QM +I N++ G AY + N ++ F YG S RK+++ + RV +
Sbjct: 118 DYIDQMQSMIGNLVEKGTAYPSANGDVYFQVEKFAKYGRLSGRKLEDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG+GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKDNEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI ++++ +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVMD-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ LS++ + +D +L
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQAYGDTQVDTLDETLLER 349
Query: 355 LY----NDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEV--CKE 399
+D NT AI L ++ +E + +ILG+ +E
Sbjct: 350 FNSAMRDDFNTAEAIAVLFEVNKELNRAVKEQQAEQAAIYYATLRHLTNILGLVQHNVEE 409
Query: 400 HLNKNI--------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L +I IE L+Q+R K K+F+ AD IR+ L +G +LED +
Sbjct: 410 FLKSDIGQEALALSEEQIEDLIQQRQDAKKAKEFAKADEIRQSLLDQGVVLEDTR----- 464
Query: 452 QRMTRWKQ 459
+ T W++
Sbjct: 465 -QGTIWRR 471
>gi|300174046|ref|YP_003773212.1| cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
gi|299888425|emb|CBL92393.1| Cysteinyl-tRNA synthetase [Leuconostoc gasicomitatum LMG 18811]
Length = 469
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 169/485 (34%), Positives = 236/485 (48%), Gaps = 52/485 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+YNTL R+ F++I P I MYVCGPTVY++ HIGNAR I FDV+ R Y +
Sbjct: 1 MIKVYNTLTREKEIFKSIIPGKINMYVCGPTVYNYIHIGNARSSIAFDVVRRYFEYRGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDKII+RAR+E I +K F++DT L T +
Sbjct: 61 --VNYVSNFTDVDDKIIQRAREEGVDE------MTIANKYANAFIEDTLPLNIQPATVRA 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT IP +I +Q++I G+AYEA ++ F YG + + ++E
Sbjct: 113 RATEVIPDIIVFVQDLINKGYAYEAKGDVYFRAKKFKGYGILAHQDLNEMAENAAGRLND 172
Query: 184 ----HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF +WK + E WESPWG GRPGWHIECS M+ YL DIHGGG+
Sbjct: 173 EEMTRKEDPIDFAVWKATQAEDEISWESPWGSGRPGWHIECSVMAQKYLSNTIDIHGGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH NE+AQS +K N W+HNGF+N+ KMSKS GNF TI+++L+
Sbjct: 233 DLAFPHHTNEMAQSEAHTG-QKFVNYWMHNGFVNVNNEKMSKSLGNFTTIHDMLKHYD-- 289
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
IRL + T YR PI+++ LT+A + L + +
Sbjct: 290 ----DPMTIRLLLATTQYRRPINYSSDTLTQARVALDRIRTGYRNLSFRLTNADVGKDAD 345
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNAS 388
A+ +D NT +A+ A+ +L + D
Sbjct: 346 LESAIKKQINIFEMAMDDDFNTPNALAAVFELVTLANTYADNKIVKIETVQYLLDTILLL 405
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ GI + I+ A ++L+ R+ F +D IR+QL G I+ED
Sbjct: 406 LGVFGITELNDKPQ--ITDAQKQLLAARVSARAAHDFELSDQIRQQLSESGIIVEDTTQG 463
Query: 449 DNGQR 453
+
Sbjct: 464 QRWHQ 468
>gi|33240685|ref|NP_875627.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|61216289|sp|Q7VB63|SYC_PROMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33238213|gb|AAQ00280.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 499
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 177/516 (34%), Positives = 251/516 (48%), Gaps = 81/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+ NTL R+ F ++ P + +Y CG TVYD H+G+AR IV+DVL R
Sbjct: 1 MPLKLTNTLTRRTETFSSLKPGEVSIYCCGVTVYDLCHLGHARSYIVWDVLRRYFIAQGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+N TDIDDKI+ RA +E N ++ ++ +N ++F +D L L P
Sbjct: 61 --KVKFVQNFTDIDDKILARASKE------NCTMNEVSERNIEEFHRDMDALGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
PRAT + ++ +I+ + G AY A ++ F NYG S+R + EQ++
Sbjct: 113 PRATRCLEEIKSMIEELEKKGAAYSAEGDVYFAVMKHANYGKLSKRDLSEQQLNADGRVT 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K+NP DF LWK + E + SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 DKEEARKQNPFDFALWKAAKEGEQSFPSPWGAGRPGWHIECSAMVLQELGETIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A+ +K A W+HNG +N+ G+KMSKS GNF TI LL+
Sbjct: 233 DLIFPHHENEIAQSEVANG-KKLAKYWLHNGMVNVGGQKMSKSLGNFTTIRALLK----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTST 342
A +RL +L HYR+P+DFT + L A + WP+ +
Sbjct: 287 -EGISAMTLRLFILQAHYRKPLDFTKESLDAASTGWKRLNVILCLGLMKHQTLNWPKPNI 345
Query: 343 SKGIID---------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
+ I + AL ND+NT AI L +LAR + +
Sbjct: 346 QESKITSLSKHSLNETLNLSRQQFIDALNNDINTSVAISILFELARPLRSLSNQIENGSS 405
Query: 384 ----------------IFNASAHILGIEVC------KEHLNKNISIAIEKLVQERLILLK 421
+ A++LG++ + + I + +QER
Sbjct: 406 ELISESDKHTSYSRWLLLTELANVLGLQAELPKTRTSKQSQNLDEVLIREAIQERKDAKL 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
F+ AD IR++L KG L D K+ +T W
Sbjct: 466 SGDFAKADKIREELNLKGVQLIDKKDG-----VTEW 496
>gi|91070003|gb|ABE10929.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
ASNC3046]
Length = 489
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 177/507 (34%), Positives = 249/507 (49%), Gaps = 74/507 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +K+ F+ ID +++Y CG TVYD H+G+AR I +D+L R L Y +
Sbjct: 1 MIKLFNTLSKKVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
RATNHI + I + G+AY + ++ + NYG S + + EQ + +
Sbjct: 112 RATNHICNICSFITVLEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNLQEQNINQQGRMVN 171
Query: 182 --KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K NP DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 EENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------- 352
+R ++ +YR+P+DFT + L A + + A
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKDAFKSIDKNES 344
Query: 353 ---------------------SALYNDLNTVSAIQALHKLAR-----------------E 374
AL NDLNT AI ++ LA+ +
Sbjct: 345 IEVEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVECFKID 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ L+ F +LG++ I I L+ ERL K K ++ AD
Sbjct: 405 LNEKFFLIENFKTLEKLTEVLGLKKEVLVKESKIKDDEISSLIDERLKAKKEKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRW 457
IR L+ KG L D + +T W
Sbjct: 465 IRNFLKEKGIELID-----QSKEITTW 486
>gi|327329368|gb|EGE71128.1| cysteine--tRNA ligase [Propionibacterium acnes HL103PA1]
Length = 476
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 157/491 (31%), Positives = 225/491 (45%), Gaps = 60/491 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+YNT I F+ + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 1 MTFKLYNTATHGIETFEPFREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT V N+TDIDDKI+ ++ + L C PT++
Sbjct: 61 Q--VTVVANVTDIDDKILAKSAATGT------PWWAHAYHYENELHAAYKALGCRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+MI L++ +I GHAY A ++ FD + P YG S ++DE
Sbjct: 113 PRATGHIPEMIELVKTLIDKGHAYPAPDGSGDVYFDVRAWPRYGELSGMRVDEMNPAEDS 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHKEDEPETASWMSPWGRGRPGWHLECSAMSGKYLGETFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQS A A W+HN ++ + G KMSKS GN + E+
Sbjct: 232 GIDLRFPHHENELAQSAAAG--RPFARYWMHNAWVTMSGEKMSKSLGNTAQVTEVT---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTV------QRLTEAEILLSKWPQTSTSKG----- 345
+++ +R +L HYR I+F+ L EA + + G
Sbjct: 286 ---KAYSPRAVRYFLLAPHYRSMIEFSPADEGTKGSLDEATKAIERIDSFLDRAGDLVGE 342
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAH 390
+ A ++A+ +DL T A+ AL E K+ L A
Sbjct: 343 QVTASQELPAAFVTAMDDDLGTPQAVAALFSQITEGNKSVSTCDVEATRHHLARVKAMLA 402
Query: 391 ILGIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ G++ + + ++++R K +++AD IR L + G
Sbjct: 403 VFGLDPQAPEWADVAGSDDRLEPVVDGLVHAMLEQRAEARARKDWATADAIRDTLTNLGL 462
Query: 441 ILEDYKNPDNG 451
+ED +
Sbjct: 463 TIEDTPAGAHW 473
>gi|320535476|ref|ZP_08035582.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
gi|320147668|gb|EFW39178.1| cysteinyl-tRNA synthetase [Treponema phagedenis F0421]
Length = 486
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 169/506 (33%), Positives = 251/506 (49%), Gaps = 70/506 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL +KI EF+ + + Y CGPTVY++AHIGN R + D+L R L +
Sbjct: 1 MSLRVYNTLGKKIEEFKPLSGMKVGFYGCGPTVYNYAHIGNLRAYVFQDILTRTLSFLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ VT+V NITD+ +DK+++ A++ S+ I T+ F DT
Sbjct: 61 D--VTHVMNITDVGHLSGDNDEGEDKMVKSAKERGKSV------MQIADYYTKAFFTDTE 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL L PT +AT+HIP+MI LI+ + GH Y + + +D S+ P+YG + +DE
Sbjct: 113 RLNILKPTIVCKATDHIPEMIALIKRLEERGHTYFSEGNLYYDISTFPDYGKMAGFTLDE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
K G RV +KKNP DF+LW + E W+SPWG+G PGWHIECSAMS YLG+
Sbjct: 173 LKAGARVAIDKNKKNPHDFVLWFTQSKFENQALVWDSPWGKGYPGWHIECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
F+IH GG+D I HH NEIAQS A + W+HN FL + KMSKS+G FIT+
Sbjct: 233 QFEIHSGGIDHIRIHHTNEIAQSEGATG-KPWVKYWMHNEFLVMNKGKMSKSSGEFITLQ 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
+++ + + R +L HYR + F+ + + A+ Q +
Sbjct: 292 AVID------KGFDPIDYRFLLLGGHYRSQLTFSWEAMETAKNARKSLQQRIENLKSGIE 345
Query: 346 ------------------------IIDPAVLSALYNDLNTVSAIQALHKLARESTK-NHD 380
+ + AL +DL+T AI + +L ++ T D
Sbjct: 346 NLSLIEEKISASDAEKLLRNSPALPYFESFVQALEDDLSTPRAISEMQQLIKDKTIYAED 405
Query: 381 LLPIFNASAHILGIEVCKEHLNKN-------ISIAIEKLVQERLILLKMKKFSSADYIRK 433
L + I G+ + ++ + + +I L+QER K + AD IR
Sbjct: 406 RLKTLSIFDQIFGLNLFEKSKSNSNKQESAMDEQSILTLIQERTDAKNAKNYQRADEIRD 465
Query: 434 QLESKGFILEDYKNPDNGQRMTRWKQ 459
+L +KG ILED + T WK+
Sbjct: 466 ELRTKGIILEDT------PKGTVWKR 485
>gi|254526663|ref|ZP_05138715.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221538087|gb|EEE40540.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 489
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 173/509 (33%), Positives = 246/509 (48%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +++ F+ ID +++Y CG TVYD H+G+AR IV+DVL R L Y +
Sbjct: 1 MIKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIVWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ATNHI + I + G+AY + ++ + NYG S + I EQ + +
Sbjct: 112 KATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAN 171
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 DENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGI 346
+R ++ +YR+P+DFT + L A
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNES 344
Query: 347 IDPAVLSALY---------------NDLNTVSAIQALHKLAR-----------------E 374
I+ + NDLNT AI ++ LA+ +
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKID 404
Query: 375 STKNHDLLP---IFNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ L+ +LG+E I I L+ ERL K K ++ AD
Sbjct: 405 LNEKFFLIENFKTLKKLTKVLGLEKEVLVKESKITEEEILSLINERLKAKKGKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L KG L D + +T W +
Sbjct: 465 IRNLLNEKGIELID-----QSKEITTWIR 488
>gi|327334964|gb|EGE76675.1| cysteine--tRNA ligase [Propionibacterium acnes HL097PA1]
Length = 487
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 155/488 (31%), Positives = 226/488 (46%), Gaps = 60/488 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YNT I F+ + + +Y CG TV H+G+ R +VFDVL R L
Sbjct: 15 KLYNTATHGIETFKPLREGQVSIYHCGMTVQSSPHLGHIRKEVVFDVLRRWLECSGY--R 72
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT V N+TDIDDKI+ ++ + L C PT++PRA
Sbjct: 73 VTVVANVTDIDDKILAKSAAAGT------PWWAHAYHYENELHAAYKALGCRPPTYEPRA 126
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T HIP+MI L++ +I GHAY A ++ FD S P YG S ++ ++ +
Sbjct: 127 TGHIPEMIELVKTLIEKGHAYPAPDGSGDVYFDVRSWPRYGELSGMRV-DEMSPAEDSDP 185
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF LWK EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGGG+D
Sbjct: 186 RGKRDPRDFALWKGHKEDEPETASWVSPWGRGRPGWHLECSAMSGKYLGEAFDIHGGGID 245
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE+AQS A A+ W+HN ++ + G KMSKS GN ++E+
Sbjct: 246 LRFPHHENELAQSAAAG--RPFAHYWMHNAWVTMSGEKMSKSLGNTAQVSEVT------- 296
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSKG-------- 345
+++ +R +L HYR I+F+ L EA + +
Sbjct: 297 KTYSPRAVRYFLLAPHYRSMIEFSPSDEGTKGSLDEATKAIERIDSFLDRASNLVGEQVT 356
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+ A + A+ +DL T A+ AL E K+ + L A + G
Sbjct: 357 ASHELSEAFVIAMDDDLGTPQAVAALFSQITEGNKSVSIGDAEATRHHLSQVKAMLAVFG 416
Query: 394 IEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ + ++ ++ +R K +++AD IR L + G +E
Sbjct: 417 LDPQAPEWADTATGDARLEPVVDGLVQAMLDQRAEARARKDWTTADAIRDTLTNLGLTIE 476
Query: 444 DYKNPDNG 451
D +
Sbjct: 477 DTPTGAHW 484
>gi|83942575|ref|ZP_00955036.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
gi|83846668|gb|EAP84544.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. EE-36]
Length = 487
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 209/493 (42%), Positives = 272/493 (55%), Gaps = 60/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT RK +F ID N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+
Sbjct: 4 IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA Q S I IT++ TQ F+ D + L P H PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAQSGRS------IGEITAETTQWFLDDMAAVGALEPDHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +IPQM+ +I+++I GHAY A ++F S YG+ S R ID+ G RV +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-------------- 230
K+NP DF+LWK S PGW+SPWGRGRPGWHIECSAM+ L K
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237
Query: 231 ---FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
FDIHGGGLDL FPHHE+EIAQSCCA+ ++ A W+HN L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+ +LL+ + P VIR ML THYR+P+D+T ++ EA L+KW +
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTEKKRDEATKTLTKWMDLTRDLEPC 351
Query: 348 DP-------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
DP ++ AL +DLNT A+ L+ L + K D A LG K
Sbjct: 352 DPAAFKPDQKLIDALADDLNTHLALTYLNALTAQPQKLLDH-------ARWLGFLSDKSR 404
Query: 401 LNKN-----------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + +L + R + +K K FS+ D ++ L + G +
Sbjct: 405 EDDAKARAAYTTSFGSGGSEVETELANRLDELRQMAMKTKDFSNVDALKSALLAAGCEVR 464
Query: 444 DYKNPDNGQRMTR 456
K
Sbjct: 465 ISKLGTEVIAGPT 477
>gi|312892185|ref|ZP_07751682.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
gi|311295315|gb|EFQ72487.1| cysteinyl-tRNA synthetase [Mucilaginibacter paludis DSM 18603]
Length = 486
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 150/497 (30%), Positives = 228/497 (45%), Gaps = 50/497 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++K+ +YNTL RK EF+ ++ ++ MYVCGPTVY H+GN R I FD+++R L +
Sbjct: 1 MEQKLFVYNTLTRKKEEFKPLNAPHVGMYVCGPTVYSDVHLGNCRTFISFDLIFRYLTHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPIND------AISIITSKNTQQFVKDTTRL 114
+ V YVRNITD +E E I + T F +
Sbjct: 61 GYQ--VRYVRNITDAGH--LEGDADEGEDKISKKAKIAKLEPMEIVQRYTVGFHEIMQVF 116
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRKID 171
L P+ +P AT HI + I L++ I+ G AYE + + FD +YG + R +D
Sbjct: 117 NALPPSIEPTATGHIIEQIELVKLILEKGFAYEVDGSVYFDVEKYNATQDYGILNGRNLD 176
Query: 172 E-QKMGTRVPEKYHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + + K DF LW K W SPWG G PGWH+ECSAMS YLG+
Sbjct: 177 DLLNNTRTLGGQDDKHGKLDFALWIKAKPEHLMKWPSPWGLGFPGWHLECSAMSHKYLGE 236
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGG+DL+ HH NEIAQ+ + WIH L + G+KMSKS GN +
Sbjct: 237 QFDIHGGGIDLMPTHHTNEIAQNVASCGKNPAL-YWIHTNMLTVNGQKMSKSLGNSFLPH 295
Query: 290 ELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------- 341
EL + + +R M+ HYR +DF+ + + +E +
Sbjct: 296 ELFAGTHSLLTKGYSPMTVRFFMMQAHYRSTLDFSNEAMEASEKGFKRLMNAFALVNGLK 355
Query: 342 ------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNA 387
+ + +A+ +D N+ I L ++++ HD L +
Sbjct: 356 ASAESDVNVAELQSKCYAAINDDFNSPVLIAELFEISKIVNSVHDGKLKIDQNNLQLLQN 415
Query: 388 SA-----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
ILG++ ++ N+ + I+ ++ R K ++++D IR L+ GF L
Sbjct: 416 IMQHFVVDILGLK-DEQAANEELPKVIDFIINLRSEAKKNMDYATSDKIRIGLQQIGFQL 474
Query: 443 EDYKNPDNGQRMTRWKQ 459
+D K T W +
Sbjct: 475 KDSK------EGTTWSK 485
>gi|166154124|ref|YP_001654242.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
gi|166154999|ref|YP_001653254.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
gi|301335362|ref|ZP_07223606.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis L2tet1]
gi|165930112|emb|CAP03595.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 434/Bu]
gi|165930987|emb|CAP06549.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis
L2b/UCH-1/proctitis]
Length = 497
Score = 338 bits (867), Expect = 1e-90, Method: Composition-based stats.
Identities = 159/494 (32%), Positives = 239/494 (48%), Gaps = 63/494 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 22 DLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY- 79
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V NITD+DDK + AR++ S+ F D L L P
Sbjct: 80 -SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAYP 132
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 133 HATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDAD 192
Query: 183 YHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG+
Sbjct: 193 EYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSMSLLGQSLDIHAGGV 252
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 253 DNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD----- 306
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 307 -QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPEV 365
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 366 ATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDAQ 425
Query: 381 -LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+G
Sbjct: 426 HILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSRG 482
Query: 440 FILEDYKNPDNGQR 453
F +ED K ++
Sbjct: 483 FAIEDGKTGMKVKK 496
>gi|170751939|ref|YP_001758199.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170658461|gb|ACB27516.1| cysteinyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 465
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 202/497 (40%), Positives = 275/497 (55%), Gaps = 76/497 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL F IDP ++R+Y CGPTVYD AHIGNARP+IVFD+L+RLLR+
Sbjct: 1 MAPMLRLYNTLTGAKEAFAPIDPQHVRVYACGPTVYDAAHIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL--- 117
YG + VTY RN+TD+DDKI RA + S I +T QF +D L L
Sbjct: 61 YGPEHVTYARNVTDVDDKINARAAERGVS------IRELTDGTLAQFHRDVRDLGVLMPE 114
Query: 118 --------APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
+PRAT+HI +M+ +I+ ++ GHAY A + ++FD S+P+YG S+R
Sbjct: 115 DVNLTGARPRFVEPRATDHIVEMVTMIEALVRAGHAYVAADHVLFDVPSMPDYGGLSKRP 174
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMSSHY 226
+DE + G RV +K++P DF+LWK + P EP W SP G GRPGWHIECSAMS+ +
Sbjct: 175 LDEMEAGARVEVAPYKRSPLDFVLWKPAKPGEPSWPSPAGIAVAGRPGWHIECSAMSAKH 234
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIH GG+DLIFPHHENE+AQS C AN+W+HNGFL +EG KMSKS GNFI
Sbjct: 235 LGRTFDIHAGGIDLIFPHHENEVAQSRCCFGTPVMANVWLHNGFLQVEGEKMSKSLGNFI 294
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---STS 343
TI ++L WP V+RL ML T YR+PID+T++ L E+ +L +W + +
Sbjct: 295 TIRDVL-------NDWPGEVVRLTMLKTQYRQPIDWTLRGLEESARVLDRWYNAAGDAPA 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------E 395
I V+ AL +DLNT +AI LH+LA + A A++LG E
Sbjct: 348 ASDIPVGVVEALCDDLNTPAAINELHRLAGGAEAQP---GALRAGANLLGFLARTRSDRE 404
Query: 396 VCKEHLNKNISIAIE---------------KLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ + A+E ++D R L + G
Sbjct: 405 QDQVAASGVDVAAVEALIAARRAARAAKDWA---------------ASDRARDALAAMGV 449
Query: 441 ILEDYKNPDNGQRMTRW 457
++D K+ T W
Sbjct: 450 AVKDNKDGT-----TTW 461
>gi|300691854|ref|YP_003752849.1| cysteine tRNA synthetase (cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
gi|299078914|emb|CBJ51575.1| cysteine tRNA synthetase (Cysteine--tRNA ligase) [Ralstonia
solanacearum PSI07]
Length = 465
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 175/504 (34%), Positives = 250/504 (49%), Gaps = 85/504 (16%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + I +T++ +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETIGALTNRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H+PRAT ++PQM+ +I + +G AY+ A+ ++ + P YG S + +++ + G RV
Sbjct: 112 HEPRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGRLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCELLGTHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQ+ A+ N W+HNGF+ + KMSKS GNF TI E+L
Sbjct: 232 GADLQFPHHENEIAQAEGANGN-TFVNTWMHNGFVRVNDEKMSKSLGNFFTIREVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDAHLDDARHALTRLYTALKDVPAEADARPDWNE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-- 401
A+ +D NT A+ AL +LA E K L A A ++G+ H
Sbjct: 344 PHGKRFREAMNDDFNTPVAMAALFELASEVNKTRSPALASQLVALAGVMGLLGRDPHAFL 403
Query: 402 --------NKNISIAIEKL------------------VQERLILLKMKKFSSADYIRKQL 435
+ + +E + AD L
Sbjct: 404 QGGVGAAADGLDAAEVEARIEARRAAKAARDFARADSI-------------RAD-----L 445
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ G +LED +T W++
Sbjct: 446 LAAGIVLEDKPGG-----VTEWRR 464
>gi|269217459|ref|ZP_06161313.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269213080|gb|EEZ79420.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 501
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 154/486 (31%), Positives = 231/486 (47%), Gaps = 56/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY++ + +F+ ++P +Y+CG TV HIG+ R + FDVL R LR +
Sbjct: 29 SLKIYDSAAHSLRDFEPLEPGRAGIYLCGATVQGAPHIGHMRSALAFDVLARWLRRSGYD 88
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +RN+TDIDDKI+ ++ + + ++F + L L PT++P
Sbjct: 89 --VRMIRNVTDIDDKILRKSAEAG------RPWWEWAYRFEREFSQAYRTLGVLPPTYEP 140
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HI I LIQ I+ GHAY + FD +S+P+YGS +R+ + +
Sbjct: 141 RATGHIADQIELIQAILDAGHAYVGDPGNVYFDVASLPDYGSLTRQSL-ANMTVDESDVE 199
Query: 183 YHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK P E W +PWGRGRPGWHIECSAM+ YLG+ FDIHGGG+D
Sbjct: 200 PDKRNPHDFALWKAPKPGEPATAAWAAPWGRGRPGWHIECSAMAGRYLGETFDIHGGGID 259
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENE AQS A R A W+HN ++ +EG KMSKS GN +T+ +
Sbjct: 260 LRFPHHENEQAQSHAAGRG--FARYWMHNAWVTIEGEKMSKSLGNSLTVEAV-------A 310
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA----- 354
R P ++R A+ HYR + ++ L EA+ + + + L
Sbjct: 311 REVPPVILRFALGTVHYRSTVAYSPATLAEAQAVWDRLAGFVARAAESEEIGLDEVASLG 370
Query: 355 -----------LYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGI 394
+ +DLN A+ A+H+ + + ILG+
Sbjct: 371 PDRLPAEFTAAMDDDLNVSGALAAVHEAVTKGNTALSERDSAGVRRAQLEVRSMLDILGL 430
Query: 395 EVCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ K + + +++ R K +++AD +R L + G ++ED
Sbjct: 431 DPLSPQWRSGAGSDAVGKALDALVADMLERRAQARAAKDWATADAVRDSLSAAGVVVEDS 490
Query: 446 KNPDNG 451
Sbjct: 491 PEGARW 496
>gi|91070080|gb|ABE11005.1| cysteinyl-tRNA synthetase [uncultured Prochlorococcus marinus clone
ASNC612]
Length = 489
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 175/509 (34%), Positives = 249/509 (48%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +++ F+ ID +++Y CG TVYD H+G+AR I +DVL R L Y +
Sbjct: 1 MIKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RATNHI + I + G+AY + ++ + NYG S + I EQ + +
Sbjct: 112 RATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAN 171
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ + DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 NENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGI 346
+R ++ +YR+P+DFT + L A +
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSASEAWKNINVALSFMDLTKGAFRFINKNES 344
Query: 347 IDPAVLSALY---------------NDLNTVSAIQALHKLAR-----------------E 374
I+ + NDLNT AI ++ LA+ +
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKID 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ LL F +LG++ I I L+ ERL K K ++ AD
Sbjct: 405 LNEKFFLLENFKTLEKLTEVLGLKKEVLVKESKITEEEISMLINERLKAKKEKNYTKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR LE KG L D + +T W +
Sbjct: 465 IRNLLEEKGIELID-----QSKAITTWIR 488
>gi|226531133|ref|NP_001146887.1| LOC100280495 [Zea mays]
gi|195604736|gb|ACG24198.1| cysteinyl-tRNA synthetase [Zea mays]
Length = 556
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 184/536 (34%), Positives = 258/536 (48%), Gaps = 102/536 (19%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ ++N+L ++ FQ + MYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 31 PQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 90
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII+RA + + ++ ++S+ +F+ D T L CL PT +
Sbjct: 91 E--VEYVRNFTDIDDKIIKRANERG------ETVTSLSSRFINEFLLDMTELQCLPPTCE 142
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I LI I+ + AY ++ F S P Y S S RK D+ + G RV
Sbjct: 143 PRVTEHIEHIIELITKIMENDKAYAMEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFD 202
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + EP W+SPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIF
Sbjct: 203 TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHLFDIHGGGKDLIF 262
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A E W+HNGF+N + +KM+KS+ NF TI ++ +
Sbjct: 263 PHHENELAQSRAAY-PESEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDITAL-------Y 314
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
+R ++ THYR ++ + Q L A + QT
Sbjct: 315 HPLALRFFLMRTHYRSDVNHSDQALEIASDRVYYIFQTLYDCEEVLATYREEGISLSVPF 374
Query: 347 -----IDPAV---LSALYNDLNTVSAIQALH-KLARESTKNHDLLP-------------- 383
ID L + NDL T + +L + + + L
Sbjct: 375 EEQNLIDKHHSEFLKYMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQ 434
Query: 384 ----------------------------IFNASAHILGI-------EVCKEHLNKNI--- 405
ILG+ EV K+ +K +
Sbjct: 435 QQKKQQQKQQQLQKQPEHYIQALIALEIELKNKLSILGLMPSSSLAEVLKQLKDKALKRA 494
Query: 406 ---SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+++ +++R + K K+F +D IRK L +KG L D T W+
Sbjct: 495 GLTEEKLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMD------EPSGTVWR 544
>gi|257095793|ref|YP_003169434.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
gi|257048317|gb|ACV37505.1| cysteinyl-tRNA synthetase [Candidatus Accumulibacter phosphatis
clade IIA str. UW-1]
Length = 465
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 189/490 (38%), Positives = 255/490 (52%), Gaps = 71/490 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++NTL R+ F DP + MYVCGPTVY++ HIGNARP++VFDVLYRLL +Y
Sbjct: 1 MSIRLHNTLTRQKDVFMPADPQRVTMYVCGPTVYNYVHIGNARPVVVFDVLYRLLSRHY- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y RNITD+DDKI A + I I+ + + +D T+L L PT +
Sbjct: 60 -PQVIYARNITDVDDKINAAAAANG------EPIRILAERYATAYREDMTQLNALPPTIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT HIPQMI LI+ +I HAY A ++F S+P+YG S R+ D+ G RV
Sbjct: 113 PWATGHIPQMIALIERLIERSHAYVAEGHVLFHVPSLPDYGKLSGRQRDDMIAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++PADF+LWK ST +PGW SPWG GRPGWH+EC+AM +LG DIHGGG DLIF
Sbjct: 173 PYKRDPADFVLWKPSTAAQPGWHSPWGFGRPGWHMECTAMIHTHLGPSIDIHGGGQDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ A+ + W+HNG++ ++G KMSKS GNF T+ +LL + +
Sbjct: 233 PHHENEIAQGEGANGGQ-YCRYWLHNGYVTVDGEKMSKSLGNFRTVRDLL-------QYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------LSA 354
P VIR A+L HYR+P+DF++ L +A L + + DPA +A
Sbjct: 285 PGEVIRYALLAGHYRKPLDFSLSALDQARAALDRLYGSLQPFAAPDPAPEGVRAEAVEAA 344
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNISIA 408
L +DLNT A+ LH+ A K D LL +A +LG+
Sbjct: 345 LADDLNTPLALGCLHEAATALRKCTDPAEQSRLLATLRDAADLLGLLQQNPATW------ 398
Query: 409 IEKLVQERLILLKMKKFSSA-------------------------DYIRKQLESKGFILE 443
R D +R++L + G +E
Sbjct: 399 -------RQQARAQDN---CPATETIEQLIAARRVARARRDFARADELRQELLTLGIGIE 448
Query: 444 DYKNPDNGQR 453
D + R
Sbjct: 449 DSATGTSWHR 458
>gi|145596731|ref|YP_001161028.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
gi|145306068|gb|ABP56650.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
Length = 471
Score = 338 bits (866), Expect = 1e-90, Method: Composition-based stats.
Identities = 161/485 (33%), Positives = 233/485 (48%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T + +F + + +Y+CG T+ HIG+ R + +DVL R L +
Sbjct: 1 MTLRLYDTATHSVRDFVPREAGKVGIYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++RN+TDIDDKI+ +A + ++ I N + L L PT++
Sbjct: 61 E--VRFIRNLTDIDDKILVKAVE------LDLPYWSIAYANELKLTAAYRALNVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+M LI +I GHAY A + ++ FD S P YG+ S + + +
Sbjct: 113 PRATGHIPEMQQLIAELIDAGHAYPATDGSGDVYFDVHSWPAYGALSNQSPGDMQ-PAGD 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF LWK + P EP W SPWGRGRPGWHIECSAM YLG FDIHGG
Sbjct: 172 APDRCKRDPRDFALWKGAKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGSEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A A W+H+G LN+ G KM KS GN L+
Sbjct: 232 GLDLTFPHHENELAQSQAAG--LPFARYWVHHGLLNIGGAKMGKSCGNT------LDLTY 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGII 347
+R HYR ID++ L EA + + G++
Sbjct: 284 VDSLGVRPVELRYYYTAAHYRSVIDYSEDALREAAVAYRRIEGFVQRSTERVGAGQPGVV 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
A +A+ +DLNT +A+ LH+ R+ L A ILG++
Sbjct: 344 PAAFAAAMDDDLNTSAALAVLHETVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLD 403
Query: 399 EHLN-----KNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ ++ ++ L +++R K +S+AD IR QL+ G ++ED
Sbjct: 404 PAWSAGGGTDDLGAVVDSLVQLALEQRAQARSRKDWSAADAIRDQLKQAGVVVEDTPQGP 463
Query: 450 NGQRM 454
Sbjct: 464 RWTIG 468
>gi|15834784|ref|NP_296543.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
gi|11387147|sp|Q9PLE0|SYC_CHLMU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|7190201|gb|AAF39040.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
Length = 475
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 162/493 (32%), Positives = 241/493 (48%), Gaps = 61/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F + +++Y CGPTVYD+AHIGN R + D+L R+L +
Sbjct: 1 MDLFLYNTLSREKERFLPSNDP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGY 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 60 --SVHHVMNITDVDDKTLAGARKKGCSLEK------YCQPYINAFFADLETLHILKADAY 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYGS S ++E + +R+
Sbjct: 112 PHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDA 171
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGG 231
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++G+KMSKS GNF T+ +LL+
Sbjct: 232 VDNIFPHHENEIAQSESLS-RKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ---- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ + +R +L HYR ++FT + L A L + +
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPE 344
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
A ++++ NDLN SA+ +L R+ D
Sbjct: 345 VGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQH 404
Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+L + +LG+ + +I + LV+ER K+K + AD +R ++ S+GF
Sbjct: 405 ILSLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGF 461
Query: 441 ILEDYKNPDNGQR 453
+ED K ++
Sbjct: 462 AIEDGKTGMKVKK 474
>gi|296166635|ref|ZP_06849062.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295898007|gb|EFG77586.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 469
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 155/475 (32%), Positives = 227/475 (47%), Gaps = 46/475 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L
Sbjct: 6 RLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLMARG-- 63
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDIDDKI+ +A + + + F L L P+ +P
Sbjct: 64 CDVAFIRNVTDIDDKILNKAAA------ADRPWWEWAATYERAFSAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QM+ L++ +I GHAY A ++ FD S P YG S KID+ G V
Sbjct: 118 RATGHITQMVELMERLIETGHAYPAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAT-- 175
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK + P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 176 CKRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGPEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN + I LL+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVLSA 354
+R + HYR ++F+ L E + + G P A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSDNALQDAVKAYVGVEEFLHRVRVRVGGVEPGEWTPRFAEA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNI 405
L +DL +A+ +H E + D A ILG + E
Sbjct: 347 LDDDLAVPAALAEVHHARAEGNRALDSGDHDGALQHARAIRAMMGILGCDPLDERWETRD 406
Query: 406 S-----IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
A+E L ++ R + + ++ AD IR +L+ G + D +
Sbjct: 407 ETSAALAAVEVLVRAELENREKAREQRNWALADEIRDRLKIAGIEVTDTADGPQW 461
>gi|157413680|ref|YP_001484546.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|187629843|sp|A8G5S9|SYC_PROM2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157388255|gb|ABV50960.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 489
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 173/509 (33%), Positives = 247/509 (48%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +++ F+ ID +++Y CG TVYD H+G+AR IV+D+L R L Y +
Sbjct: 1 MIKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIVWDILRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ATNHI + I + G+AY + ++ + NYG S + I EQ + +
Sbjct: 112 KATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINQQGRMAN 171
Query: 184 HKKNPA----DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ + DF LWK++ EP ++SPWG+GRPGWHIECSAM LG DIH GG D
Sbjct: 172 DENSKKLNPQDFALWKKAKDDEPFFDSPWGKGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGI 346
+R ++ +YR+P+DFT + L A
Sbjct: 286 -GISPMSLRYFVMTVNYRKPLDFTEEALRSASEAWKNINIALSFMDLTKGAFRYIDKNES 344
Query: 347 IDPAVLSALY---------------NDLNTVSAIQALHKLAR-----------------E 374
I+ + NDLNT AI ++ LA+ +
Sbjct: 345 IEEEYKEKISFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRVEGFKID 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ L+ F +LG+E I I L+ ERL K K ++ AD
Sbjct: 405 LNEKFFLIENFKTLEKLTKVLGLEKEVLVKESKITEEEISSLINERLKAKKGKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L KG L D + +T W +
Sbjct: 465 IRNLLNEKGIELID-----QSKEITTWIR 488
>gi|126465424|ref|YP_001040533.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
gi|166225308|sp|A3DLW5|SYC_STAMF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126014247|gb|ABN69625.1| cysteinyl-tRNA synthetase [Staphylothermus marinus F1]
Length = 477
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 175/497 (35%), Positives = 232/497 (46%), Gaps = 64/497 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IKIYNTL RKI EF+ + P ++MYVCGPTVYD+ HIG+ R +V+D L R L
Sbjct: 4 IKIYNTLTRKIEEFKPVSPGFVKMYVCGPTVYDYNHIGHGRVYVVYDALKRYLALRGY-- 61
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V NITDIDDKII RA QE I T+ +++ +L PR
Sbjct: 62 HVLHVMNITDIDDKIINRAHQEKRD------WREIAETYTRDYLESLGKLNVK-VDLHPR 114
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HI ++I IQ +I G+AY + + F+ P YG S R E +
Sbjct: 115 VTEHIKEIIEFIQILIDKGYAYVAPSGSVYFEVDKYPEYGELSGRTNKELWSQEKEFISE 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK P DF LWK P EP W++PWG+GRPGWHIECS MSS YLG+ FDIHGGG DLIFP
Sbjct: 175 -KKKPYDFALWKAWKPGEPHWDAPWGKGRPGWHIECSVMSSRYLGRQFDIHGGGTDLIFP 233
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS A ++ W+H G + + KMSKS GN I + E + W
Sbjct: 234 HHENERAQSEAAFGVKPWVKYWVHTGMVMMGSEKMSKSLGNIIPLREAF-------KEWG 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
+RL L +HYR P+ FT + + +A+ + + +
Sbjct: 287 PETLRLWYLTSHYRRPLVFTEESIRQAQKYYERLVSVTNTIKKLSREAVSLHRMNDEDLK 346
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASA 389
I AL ND NT A+ + + K +
Sbjct: 347 ILEKLLEIRSRFHEALSNDFNTPQALAVISEFMTLVFKEIQYNPKYMLVLTAYKLLREFN 406
Query: 390 HILGIEVC-----KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LG+ E L + I +V R L + K + AD IR +L G IL D
Sbjct: 407 TVLGVLDKYLVETPEELETLLDNVINIVVDIRRELRERKLYDLADRIRSELGKHGIILMD 466
Query: 445 YKNPDNGQRMTRW-KQK 460
+ T W ++K
Sbjct: 467 RG------KETTWMRRK 477
>gi|332530126|ref|ZP_08406075.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
gi|332040396|gb|EGI76773.1| cysteinyl-tRNA synthetase [Hylemonella gracilis ATCC 19624]
Length = 475
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 176/507 (34%), Positives = 246/507 (48%), Gaps = 84/507 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + F +++P ++RMYVCG TVYD H+G+AR M+ FDV+ R L+
Sbjct: 1 MTLRIYNTLSRALEPFVSLEPGHVRMYVCGMTVYDLCHLGHARAMVAFDVVQRWLKASGW 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + + I +T + +D L PTH+
Sbjct: 61 --RVTYVRNITDIDDKIIQRALKNG------ETIRGLTDRMIAALHQDADALGIQRPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-------IIFDTSSIPNYGSFSRRKIDEQKM 175
PRA +++PQM+ LI + G AY + + + P YG S + +DE +
Sbjct: 113 PRAMDYVPQMLDLIGQLERQGLAYRVPGQAGGASGDVNYSVRKFPGYGKLSGKSLDELRA 172
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFD 232
G RV K++P DF+LWK + EP W+SP+G GRPGWHIECSAMS LG+ FD
Sbjct: 173 GERVAVLDGKQDPLDFVLWKSAKADEPAEAQWQSPYGAGRPGWHIECSAMSCALLGESFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSC-----CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
IHGGG DL FPHHENEIAQS A+ + A W+HNGF+ ++ KMSKS GNF T
Sbjct: 233 IHGGGADLQFPHHENEIAQSEGAKIGAANEGQPMARYWMHNGFVRVDNEKMSKSLGNFFT 292
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP--------- 338
I E+L + + A +R +L HYR P+++ L +A L +
Sbjct: 293 IREVL-------QKYDAQTVRFFILRAHYRSPLNYGDAHLDDARSALKRLYTALQATPPA 345
Query: 339 ----QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHIL 392
QT +A+ D T A+ L LA E K L + A L
Sbjct: 346 PMAPQTVDWTEGHAARFKAAMDEDFGTPEAVAVLFDLATEVNKTGSARLAALLKALGGCL 405
Query: 393 GIEVCKE-------HLNKNISIAIEKLV-------------QERLILLKMKKFSSADYIR 432
G+ + AI+ L+ + D IR
Sbjct: 406 GLLQEDPVAFLQSGASAALDASAIDSLIAQRAAAKAAKNFAEA-------------DRIR 452
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
++L ++G +L+D T W+
Sbjct: 453 QELLAQGIVLKD------APTGTTWEV 473
>gi|114704768|ref|ZP_01437676.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
gi|114539553|gb|EAU42673.1| cysteinyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
Length = 559
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 220/422 (52%), Positives = 284/422 (67%), Gaps = 30/422 (7%)
Query: 3 KKIKIYNTLERKITEFQAID---------PSNIRMYVCGPTVYDFAHIGNARPMIVFDVL 53
+ +++ NT+ R+ +F +D +RMYVCGPTVYD+AHIGNARPMIVFDVL
Sbjct: 6 RGLRLSNTMTRQKEDFVPLDWRDAEIPEAEKRVRMYVCGPTVYDYAHIGNARPMIVFDVL 65
Query: 54 YRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
+RLLR+ YGE V Y RNITD+DDKI RA ++ P +P+NDAI +T++ T+QF D
Sbjct: 66 FRLLRHLYGEDHVVYARNITDVDDKINARAARDFPDMPLNDAIRRVTTRTTEQFHTDIAA 125
Query: 114 LACLAPTHQPRATNHI------PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
L CL PT +PRAT+++ M+ +I+ +I GHAYEA E++FD +S+P+YGS S+
Sbjct: 126 LCCLPPTVEPRATDYVSGHANGHDMVAMIETLIEKGHAYEAGGEVLFDVTSMPDYGSLSK 185
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
R++DEQ+ G RV HK+NP DF+LWK S EPGW SPWGRGRPGWHIECS MS +L
Sbjct: 186 RRLDEQQAGARVAVDSHKRNPGDFVLWKLSDENEPGWGSPWGRGRPGWHIECSVMSEAHL 245
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
GK FDIHGGGLDLIFPHHENEIAQS CA A +W+HNG++ +EGRKMSKS GNFIT
Sbjct: 246 GKTFDIHGGGLDLIFPHHENEIAQSRCAHGTASMAEVWMHNGYVQVEGRKMSKSEGNFIT 305
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
I++LL T+KFGGR WP V+RLAMLMTHYREPIDF+V+RL EA LS+ Q + I+
Sbjct: 306 IHDLLHTEKFGGRKWPGEVLRLAMLMTHYREPIDFSVKRLEEAAEELSRLAQKFDYEEIL 365
Query: 348 DPA--------------VLSALYNDLNTVSAIQALHKLARESTKNH-DLLPIFNASAHIL 392
+ + AL +DLN A++ + + K+ + AS L
Sbjct: 366 NNWSLRKELELRDFVPGFVEALEDDLNISLALRYVREAVSNVRKSEFGKVTQIIASLEFL 425
Query: 393 GI 394
GI
Sbjct: 426 GI 427
>gi|94987050|ref|YP_594983.1| cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
gi|123082155|sp|Q1MQR5|SYC_LAWIP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|94731299|emb|CAJ54662.1| Cysteinyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
Length = 485
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 174/499 (34%), Positives = 244/499 (48%), Gaps = 67/499 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT+E+K I + +YVCG T YDF+HIG+AR IVFD+L RLLRY +
Sbjct: 1 MHLYNTMEKKKEPLIPIISGKLGIYVCGITAYDFSHIGHARSAIVFDILVRLLRYQGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT++RN TDIDDKII RA +E S + + F +D RL L +P+
Sbjct: 60 -VTFIRNFTDIDDKIINRANKEGRSS------KEVAEEFINAFHEDMDRLGVLNADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT++IP+MI Q ++ AY + ++ F S P+YG S R DE ++G R+
Sbjct: 113 ATDYIPEMIECCQKLLEADKAYITASGDVYFRVRSFPDYGKLSGRTPDELRIGVRIVPSE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK + P EP WESPWGRGRPGWHIECSAMS DIHGGG+DLIFP
Sbjct: 173 EKEDPLDFVLWKAAKPGEPSWESPWGRGRPGWHIECSAMSEKCWPLPLDIHGGGIDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ + A IW+HNG + + KMSKS GNF + ++LE +
Sbjct: 233 HHENEIAQTESIVN-KPLAKIWMHNGLVQVNSEKMSKSLGNFKIVRDILEA-------YL 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STSK 344
+R +L HYR PIDF+ + + E E + + S+
Sbjct: 285 PETLRFFLLKKHYRSPIDFSFEGMNETERSQKRVYECIAEVDKALERKSWDSGGSSSSIL 344
Query: 345 GIIDPA---VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------F 385
+D +SAL +D NT + + L + + D +
Sbjct: 345 AELDEQFSLFMSALEDDCNTAAGLGHLFNIIHIVRRALDDKALYSTTDGKVVFEQFREII 404
Query: 386 NASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ K + NK +E+L+ +R + K F AD +R
Sbjct: 405 RKVDILLGVFGQKPNSFLQDLKTIRIIRNKIDVNQVEELLSKRRQAREEKNFVQADEVRN 464
Query: 434 QLESKGFILEDYKNPDNGQ 452
L S G + D
Sbjct: 465 TLASLGIEIRDTSEGQVWD 483
>gi|119872615|ref|YP_930622.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
gi|189082073|sp|A1RTJ7|SYC_PYRIL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119674023|gb|ABL88279.1| cysteinyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
Length = 473
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 167/473 (35%), Positives = 240/473 (50%), Gaps = 44/473 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT R++ EF P R YVCG T YD H+G+ R + FD+ R L E
Sbjct: 1 MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII RA++E I + ++ + T +L PR
Sbjct: 60 -VRLVINFTDIDDKIINRAKEEF-GHEAYKRWREIPERYIAEYFEMTKKLYIKPAYAYPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I ++ G+AY + + F+ + +PNYG SR+KI+E G RV +
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELVAGARVEPEP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK TP EP W+SPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWDSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVLS-------KHS 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSAL- 355
+RLA M+HYR+P++FT + L +AE + G D L+
Sbjct: 291 GEALRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPLAQEA 350
Query: 356 -----------YNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHI 391
+D++T A+Q L+ +AR +L + A +
Sbjct: 351 LKYAEAFYGALDDDMSTPEAVQQLYGMARYIISTVLHKIEKISRETALTILNKYVEMADV 410
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ + + + K + ++ LV+ R L + +++ ADYIR++L G L D
Sbjct: 411 LGV-LERRQIPKELEEVVKTLVEVRAKLRQERQYQLADYIRQRLAELGVELHD 462
>gi|326562651|gb|EGE12953.1| cysteinyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
Length = 483
Score = 337 bits (865), Expect = 2e-90, Method: Composition-based stats.
Identities = 166/458 (36%), Positives = 234/458 (51%), Gaps = 52/458 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++Y+TL F+ I I +YVCG TVYD+ H+G+AR M+ FDV+ R LR
Sbjct: 8 QSQLQLYDTLSASKRPFKPIHAGQIGIYVCGMTVYDYCHMGHARVMVGFDVIVRWLRAIG 67
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YVRNITDIDDKII+RA + I+ +T + +D L C +P
Sbjct: 68 YQ--VNYVRNITDIDDKIIQRAYDNG------ETITELTDRFITAMHQDEQFLGCQSPNI 119
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTR 178
+PRAT HI M +LI ++ AY+ + ++ + PNYG S+R +D+ + R
Sbjct: 120 EPRATEHIENMQHLIDVLLTKNLAYQGSGGDVYYAIEKFPNYGKLSKRHVDDMQAGASER 179
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K++P DF+LWK + P EP W+SPWG GRPGWHIECSAMS+ LG+ FDIHGGG
Sbjct: 180 VSTAEDKRHPFDFVLWKTAKPSEPHWQSPWGLGRPGWHIECSAMSTCCLGETFDIHGGGH 239
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + AN W+H GF+N++G KMSKS GNF TI E+++
Sbjct: 240 DLQFPHHENEIAQSEGATG-KTYANHWMHMGFINIDGEKMSKSLGNFFTIREVVD----- 293
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------STSK 344
+ IR +L +HYR P++F+ L E+ LS+ Q+ + +
Sbjct: 294 --KFHPETIRFFLLSSHYRSPVNFSDTALKESHTALSRIYQSLKSAENFGVISIMPNAWE 351
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIE 395
A A+ +D NT A+ L + E K A +L I
Sbjct: 352 SEAGQAFAKAMNDDFNTPKAVSVLFSVVTEINRAMKAGEYQKATQEASTLKTLASVLNIA 411
Query: 396 VCKEHL----------NKNISIAIEKLVQERLILLKMK 423
H + I + +R K
Sbjct: 412 QSSPHEFLQANIGNKPDGLSDAEIANKIAQRQQAKSSK 449
>gi|284029008|ref|YP_003378939.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
gi|283808301|gb|ADB30140.1| cysteinyl-tRNA synthetase [Kribbella flavida DSM 17836]
Length = 480
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 151/489 (30%), Positives = 236/489 (48%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T + +F + P + +Y CG TV H+G+ +VFDVL R L
Sbjct: 1 MTLRLYDTATAAVRDFVPVHPGKVGIYHCGLTVQGAPHVGHIYKEVVFDVLRRWLERSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT + N+TDI+DKI+ ++ + + ++ L C PT++
Sbjct: 61 Q--VTVIANVTDIEDKILAKSAER------EIPWWAHAYEFERELHWAYDVLGCRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+M+ +IQ +I GHAY A ++ FD S P YG S +KID+ +
Sbjct: 113 PRATGHIPEMLEMIQQLIDGGHAYVAQDGSGDVYFDVKSWPAYGELSNQKIDDMEAAEDA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK T P W +PWGRGRPGWH+ECSAM+ YLG FDIHGG
Sbjct: 173 DPR-GKRDPRDFALWKGHTEGVPLTASWPTPWGRGRPGWHLECSAMAGKYLGGEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS +K A W+HN + G KMSKS GN + ++E +
Sbjct: 232 GLDLRFPHHENELAQSTAVG--QKFARFWMHNALVTAAGEKMSKSLGNGAIVRNVVERVR 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------- 345
+R ++ +HYR ++F+ L EA + T
Sbjct: 290 -------PIELRFYLVQSHYRSVVEFSFGALDEAATSFQRIEGFVTRATELTGAADRVDP 342
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILG 393
+ ++A+ +DL T +A+ LH R+ K + L + + G
Sbjct: 343 AAVELPADFVAAMDDDLGTPAAMAVLHTTVRDGNKLLADGDSPALRETLATVRSMLDVFG 402
Query: 394 IEVCKE----------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ E L + + ++ L+ +R + K ++++D IR +L++ G ++E
Sbjct: 403 LDPLAEPWVSRTGTTDELTEVVDGLVQALLDQRQAARERKDYAASDQIRDRLKALGVVVE 462
Query: 444 DYKNPDNGQ 452
D
Sbjct: 463 DTPQGPRWT 471
>gi|145629045|ref|ZP_01784844.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|144978548|gb|EDJ88271.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
Length = 414
Score = 337 bits (864), Expect = 2e-90, Method: Composition-based stats.
Identities = 165/429 (38%), Positives = 230/429 (53%), Gaps = 37/429 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ +++ + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLEQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTALRGTDQSAVVFGGENFVETFRE 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHL---N 402
A+ +D NT +A+ L ++ARE K + L ILG+
Sbjct: 345 AMDDDFNTPNALSVLFEMAREINKLKTEDAEKANGLAARLRELGAILGLLQQDPEKFLQA 404
Query: 403 KNISIAIEK 411
+ + K
Sbjct: 405 GSDDDEVAK 413
>gi|270284951|ref|ZP_06194345.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Nigg]
gi|270288977|ref|ZP_06195279.1| cysteinyl-tRNA synthetase [Chlamydia muridarum Weiss]
gi|301336349|ref|ZP_07224551.1| cysteinyl-tRNA synthetase [Chlamydia muridarum MopnTet14]
Length = 479
Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 162/493 (32%), Positives = 241/493 (48%), Gaps = 61/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F + +++Y CGPTVYD+AHIGN R + D+L R+L +
Sbjct: 5 MDLFLYNTLSREKERFLPSNDP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRVLLFLGY 63
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 64 --SVHHVMNITDVDDKTLAGARKKGCSLEK------YCQPYINAFFADLETLHILKADAY 115
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYGS S ++E + +R+
Sbjct: 116 PHATHYIPQMIEAIQQLIDQGIAYVGQDQSVYFSISRFPNYGSLSHLNLEELRQSSRIDA 175
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 176 DEYDKDNLCDFVLWKAYDPNRDGEIFWESPFGKGRPGWHLECSIMSMALLGQSLDIHAGG 235
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++G+KMSKS GNF T+ +LL+
Sbjct: 236 VDNIFPHHENEIAQSESLS-RKPFVRYWLHSHHLLVDGKKMSKSLGNFFTLRDLLQ---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ + +R +L HYR ++FT + L A L + +
Sbjct: 291 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLQAARQSLKRLRDFISRLEDPFYPDDIIHPE 348
Query: 347 -------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
A ++++ NDLN SA+ +L R+ D
Sbjct: 349 VGSACQNFLEAFVTSITNDLNISSALASLFDFIRKINGMIDRQSIQEETSSEFSKQDAQH 408
Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+L + +LG+ + +I + LV+ER K+K + AD +R ++ S+GF
Sbjct: 409 ILSLLRQIDQVLGVLPFSQ---ADIPEDVLLLVKEREAARKVKNWKEADRLRDEIISRGF 465
Query: 441 ILEDYKNPDNGQR 453
+ED K ++
Sbjct: 466 AIEDGKTGMKVKK 478
>gi|327403405|ref|YP_004344243.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
gi|327318913|gb|AEA43405.1| cysteinyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
Length = 517
Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 156/495 (31%), Positives = 233/495 (47%), Gaps = 53/495 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + IYN+L + F+ I + MYVCGPT+Y H+GN R I FD++YR L +
Sbjct: 30 KHPLLIYNSLSGEKEVFKPIIAGKVGMYVCGPTLYSEPHMGNMRTFINFDLIYRYLLHLG 89
Query: 62 GEKCVTYVRNITDID----------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD D I + AR E I K +F
Sbjct: 90 --LQVKYVRNITDAGHITNSAGEAVDSIGKAARVEQVQSL------EIVYKYNVKFQDLQ 141
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FSR 167
L P+ +P AT HI + I +I+ II +G AY N + FD + R
Sbjct: 142 RIYNLLPPSIEPTATGHIQEQIEVIEKIIENGFAYVVNGSVYFDVRAYGEKFEYGILSGR 201
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHY 226
+ + + + + K+ ADF LWK+S P + W SPWG G PGWHIEC+AMS+ Y
Sbjct: 202 KVDELAEETRELNAQEEKRFFADFALWKKSNPDDMQIWRSPWGDGNPGWHIECTAMSTKY 261
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FDIHGGGLDL FPHHE+EIAQSC + + AN W+H LN+ G+KMSKS GN+
Sbjct: 262 LGDQFDIHGGGLDLKFPHHEDEIAQSCGSAGVSP-ANYWMHANMLNVNGQKMSKSLGNYF 320
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
E+++ + + VIR M+ HYR +DFT L AE ++ + G
Sbjct: 321 LPKEIVDGTTDVFDKPYSPQVIRFCMMQAHYRSTLDFTPDSLNAAEKGFTRLSEAYEKLG 380
Query: 346 IID-------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----- 387
++ + A+ +D N + +L + + + +A
Sbjct: 381 SLEVKETSSQDVPALVDSFYKAMNDDFNAPMLVASLFEAVKFINTVSEGKATISADDLEI 440
Query: 388 --------SAHILGIEVCKE--HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+LG+ + K N+ ++ ++ ++ R + K +S++D IR +L
Sbjct: 441 LTKEFTGFVFDVLGLSIEKSTAGANEALTATMDLVLDMRKSARENKDWSTSDKIRDRLAE 500
Query: 438 KGFILEDYKNPDNGQ 452
G +++D K+
Sbjct: 501 AGIVVKDGKDGVTWT 515
>gi|285018667|ref|YP_003376378.1| cysteinyl-tRNA synthetase [Xanthomonas albilineans GPE PC73]
gi|283473885|emb|CBA16387.1| probable cysteinyl-trna synthetase protein [Xanthomonas
albilineans]
Length = 466
Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 182/482 (37%), Positives = 255/482 (52%), Gaps = 44/482 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIR--MYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
M ++++YN L R++ F+ +DP + YVCGPTVY++AHIGNAR +VFDVL +
Sbjct: 1 MPMRLRLYNNLTRQLDAFEPLDP-HAGPTFYVCGPTVYNYAHIGNARGPVVFDVLAK--L 57
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+ Y RNITD+DDKI A+ + IS IT + + +D L
Sbjct: 58 LRRRYGRLRYARNITDVDDKINAAAQAQGV------PISAITDRFAAIYRQDMAALGVAP 111
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
P +P+AT HIPQ++ +IQ +I +GHAY A ++F +S +YG SRR +E G R
Sbjct: 112 PDIEPQATTHIPQIVAMIQRLIDNGHAYPAEGHVLFAVASFADYGKLSRRDPEELLAGAR 171
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V +K++P DF+LWK S+ PGW+SPWGRGRPGWHIECSAM++ +LG+ DIH GG+
Sbjct: 172 VDVAPYKRDPGDFVLWKPSSDDLPGWDSPWGRGRPGWHIECSAMAAAHLGETIDIHAGGV 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS CA A W+HNG L G KMSKS GN T++EL+
Sbjct: 232 DLQFPHHENEIAQSQCAHGGATFARFWLHNGMLTFSGAKMSKSLGNIETVHELIA----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------IIDPAVL 352
P +R A+L HYR+P+D++ +T+++ L + T I V
Sbjct: 287 --KHPPEALRYALLSAHYRQPLDWSEALITQSKNTLDRLYGTLRDLSGYSAEPDIPAEVD 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIF-----NASAHILGI------------- 394
AL +DLNT A+ L LA + AH+
Sbjct: 345 IALDDDLNTPKALAELSALASRARTLLSKPEHIGPAEHAELAHVKANLLGAGLALGLLQQ 404
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
V + + +I+ L+ ER + + F+ AD IR+QL G +LED +
Sbjct: 405 DPNVWFQGADNADDASIQALIDERSAAKQRRDFARADAIRQQLADTGIVLEDTPQGIRWK 464
Query: 453 RM 454
R
Sbjct: 465 RG 466
>gi|281355430|ref|ZP_06241924.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
gi|281318310|gb|EFB02330.1| cysteinyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
Length = 471
Score = 337 bits (863), Expect = 3e-90, Method: Composition-based stats.
Identities = 169/477 (35%), Positives = 238/477 (49%), Gaps = 46/477 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +NT++RK+ FQ ID +RMY CGPTVY+FAHIGN R + D+L R L Y+
Sbjct: 1 MDLQFFNTMDRKVVPFQPIDAKLVRMYTCGPTVYNFAHIGNFRAYMFEDLLRRTLEYFGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N+TD+DDK I +R + T+K Q F +D L
Sbjct: 61 --PVRQVMNLTDVDDKTIRDSRAARL------PLREFTAKYKQAFFEDLKTLNIEPAEVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT+HIPQMI LI ++ G AY+A + I F P+YG ++ + Q+ G R+
Sbjct: 113 PAATDHIPQMIRLISVLMEKGFAYQAEDKSIYFSIDKFPDYGKLAKIDRENQRSGVRIKN 172
Query: 182 KYH-KKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K + ADF LWK + W+SPWG+GRPGWHIECSAMSS YLG FDIH GG+
Sbjct: 173 DEYAKDSVADFALWKAWDENDGDVAWDSPWGKGRPGWHIECSAMSSEYLGDQFDIHTGGI 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
D +FPHHE+EIAQS A +K N W+H L + G KMSKS GNF T+ +L
Sbjct: 233 DNMFPHHEDEIAQSEAASG-KKWVNYWLHCAHLMVNGEKMSKSLGNFFTLRDL------Q 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------- 349
+ W IR ++ HYR+ ++FT + L +A L ++ + I
Sbjct: 286 QKGWKGREIRWVLIGAHYRKKLNFTFEALEQARETLGRFDEFFQRMREIAQTGDGTEISQ 345
Query: 350 -------AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHI 391
A +A+ +DLN A+ A+ L R + + D L F I
Sbjct: 346 TVAGAEQAFAAAMGDDLNISEALAAMFDLQRAANRLADAGELTAAGGAEVLAAFRKFDRI 405
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+G + + L + R+ K K F +D +R ++ GFI+ED
Sbjct: 406 IGCFEVDAVKTEEFPAEVTALAEARIEARKAKNFVESDRLRDEIAGLGFIVEDIPGG 462
>gi|83953795|ref|ZP_00962516.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
gi|83841740|gb|EAP80909.1| cysteinyl-tRNA synthetase [Sulfitobacter sp. NAS-14.1]
Length = 486
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 210/477 (44%), Positives = 276/477 (57%), Gaps = 47/477 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++NT RK +F ID N+RMYVCGPTVYD AH+GNARP+IVFDVL RLLR+ YG+
Sbjct: 4 IKLHNTKTRKREDFTPIDDKNVRMYVCGPTVYDRAHLGNARPVIVFDVLNRLLRHVYGDA 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA + S I IT++ TQ F+ D + L P H PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAESGRS------IGEITAETTQWFLDDMAEVGALEPDHMPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +IPQM+ +I+++I GHAY A ++F S YG+ S R ID+ G RV +
Sbjct: 118 ATAYIPQMVAMIEDLIAKGHAYAAEGHVLFSVESYKAYGALSGRSIDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-------------- 230
K+NP DF+LWK S PGW+SPWGRGRPGWHIECSAM+ L K
Sbjct: 178 KRNPMDFVLWKPSDDATPGWDSPWGRGRPGWHIECSAMADELLWKEPLRQDRLSDEAKSA 237
Query: 231 ---FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
FDIHGGGLDL FPHHE+EIAQSCCA+ ++ A W+HN L +EG+KMSKS GNF T
Sbjct: 238 PHVFDIHGGGLDLQFPHHEDEIAQSCCANGTDEMARYWLHNEMLQVEGKKMSKSLGNFFT 297
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+ +LL+ + P VIR ML THYR+P+D+TV++ EAE L + T S
Sbjct: 298 VRDLLD------QGVPGEVIRFVMLSTHYRKPMDWTVEKQVEAEATLFGYISTLESYEEF 351
Query: 348 D------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA--HILG 393
P ++SAL DL+T A+ L K R+ K L G
Sbjct: 352 PVSLEKARELDPSPEIISALARDLDTYGALGVL-KTLRDRNKASQLARDLVFLGFYSWSG 410
Query: 394 IE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+E + + +++S KL + R + + K F+ D+++ QL+ GF + N
Sbjct: 411 LETKVAERSDIKRDLSKLASKLEEVRTVAKETKDFTELDHLKTQLDLAGFSVRMSAN 467
>gi|169627674|ref|YP_001701323.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
gi|169239641|emb|CAM60669.1| Cysteinyl-tRNA synthetase [Mycobacterium abscessus]
Length = 479
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 158/479 (32%), Positives = 226/479 (47%), Gaps = 50/479 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T + +F + P + +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 7 LRLYDTRVGAVRDFVPLQPGTVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLSARAYD- 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN+TDIDDKI+ +A + + F + L L P+ PR
Sbjct: 66 -VLFVRNVTDIDDKILNKAADAG------RPWWEWAATYERAFDEAYESLGVLPPSVSPR 118
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
AT HI QMI LI +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 119 ATGHITQMIELIDRLIERGHAYRDLREGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVA 178
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM+ YLG FDIH GG+DL
Sbjct: 179 TG--KRDPRDFTLWKGAKPGEPSWPTPWGPGRPGWHLECSAMARTYLGPSFDIHCGGMDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQSC A A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 237 VFPHHENEIAQSCAAGDG--FARYWMHNGWVTMGGEKMSKSLGNVLSIPAVLQRVRAVE- 293
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS---------KWPQTSTSKGIIDPAV 351
+R + HYR ++++ L +A + G PA
Sbjct: 294 ------LRYYLGSAHYRSMLEYSETALADAVKAYCGIEDFLHRVRIRVGDVPVGTWTPAF 347
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
+AL +DL+ A+ +H + + D A ILG + E
Sbjct: 348 AAALDDDLSVPIALAEVHSTRADGNRALDAGDHEGALSAAASIRAMMSILGCDPLDERWE 407
Query: 403 ---------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + +Q R K ++ AD IR +L+ G + D +
Sbjct: 408 TRDETSAALNAVDVLVTAELQRRETARTEKNWALADEIRDRLKRAGLEITDTADGPQWT 466
>gi|187631649|sp|A2SIM2|SYC_METPP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 461
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 241/494 (48%), Gaps = 75/494 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+NTL R F I+P ++RMYVCG T+YD H+G+AR M+ FDV+ R LR
Sbjct: 1 MSLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + I +T + T +D L PTH+
Sbjct: 60 -LRVTYVRNITDIDDKIIKRALERGI------PIRQLTDEMTAAMHQDIGALGIEPPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++ M+ LI+ + +G AY ++ + P YG S + ID + G RV
Sbjct: 113 PRATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + P EP +++P+G GRPGWHIECSAMS LG+ FDIHGGG+
Sbjct: 173 LEGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGM 232
Query: 239 DLIFPHHENEIAQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS A N+W+HNGFLN++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL--- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKG 345
+ + IR ML HYR P +F+ L +A L +
Sbjct: 290 ----KRYDGETIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAEIDWTD 345
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK----- 398
+A+ +D NT A+ L LA E ++ + + A LG+ +
Sbjct: 346 PHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQYL 405
Query: 399 EHLNKNISIAIE---------------KLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + + IE +D IR L ++G +L+
Sbjct: 406 QGGSGVDTGHIEAQIAARAAAKAARDFA---------------ESDRIRDALAAQGIVLK 450
Query: 444 DYKNPDNGQRMTRW 457
D T W
Sbjct: 451 DT------PAGTTW 458
>gi|325968781|ref|YP_004244973.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323707984|gb|ADY01471.1| cysteinyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 503
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 172/480 (35%), Positives = 234/480 (48%), Gaps = 46/480 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YNT+ + + + P R+YVCG T YD H+G+AR + +D+L R L Y E V
Sbjct: 26 VYNTVSKNLERITLLRPGLARIYVCGLTPYDSMHVGHARTFVFYDILRRYLEYLGVE--V 83
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+V N TDIDDKII +A+QE S IN + S+ ++F +L P+ T
Sbjct: 84 RFVTNFTDIDDKIINKAKQEFGSDLINR-WYEVPSRYIKEFFDAIDKLYVKRAYAYPKVT 142
Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+I M+ IQ ++ AY + + FD + +P YG FS +KI++ G RV + K
Sbjct: 143 ENISDMLKWIQELVGKDLAYVSPDGSVYFDITKVPRYGEFSGQKIEDLIAGARVEPEPGK 202
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
KNP DF LWK + EP W SPW GRPGWH+EC MSS YLG FDIHGGG DLIFPHH
Sbjct: 203 KNPLDFALWKSWSEGEPWWNSPWSPGRPGWHLECVVMSSKYLGVPFDIHGGGQDLIFPHH 262
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENEIA + I+ A WIH G + ++G+KMSKS GN I I ++L + +
Sbjct: 263 ENEIAIARVYFGIDYFAKYWIHVGLVTIKGQKMSKSLGNIIPIMDVL-------KKYDGE 315
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------------- 344
V+RL M YR+P+DF L + L
Sbjct: 316 VLRLYYSMAQYRKPMDFDPDALDQVRNSLMSIYAAYDMLTEVINEAPDTGDEDNKLLSRV 375
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHI 391
+ +L ND+NT A+ AL AR T + L F A+I
Sbjct: 376 NDFVNSFEESLNNDINTSGAVAALMDFARYITSTVIYNTQHFSRTALMNALTAFTDLANI 435
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LGI + + L +I IE L++ R L K F AD IR +L G ++ D
Sbjct: 436 LGI-LNRTRLPPSIISLIEALIRVRAQLRARKMFDLADEIRNELGRLGVVISDVGGKTYW 494
>gi|72382588|ref|YP_291943.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|109894920|sp|Q46JT8|SYC_PROMT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|72002438|gb|AAZ58240.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 500
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 176/516 (34%), Positives = 246/516 (47%), Gaps = 80/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K NTL +K +F +I+P+ +++Y CG TVYD H+G+AR + +DVL R L +
Sbjct: 1 MSLKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V+N TDIDDKII RA +E S ++ +N +F KD L+ L PT
Sbjct: 61 E--VKFVQNFTDIDDKIINRANKEGCST------DELSERNIDEFHKDMDTLSILRPTSM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
PRAT + Q+I I+ + AY +N ++ F NYG S R+I++Q +
Sbjct: 113 PRATKCLHQIINFIEELEQKKVAYSSNGDVYFSVDKHKNYGKLSGREIEDQIDNAAGRLK 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+K KKN DF LWK+S E + SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 TNQKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGS 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS + E A W+HNG +N+ G KMSKS GNF TI LLE
Sbjct: 233 DLIFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLEED--- 288
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+R +L T+YR+P+DFT + L A +
Sbjct: 289 ---ISPMTLRFFVLQTNYRKPLDFTEEALKAASKGWERLNNCLSFGYIYKIKDQSKNEIF 345
Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-------------- 373
+ + + +DLNT A+ L +L++
Sbjct: 346 LDKPIKKSANTKLDKNSFKLLSDFEKYMDDDLNTSGALSILFELSQPIRKIINFLKEKDI 405
Query: 374 ------ESTKNHDLLPIFNASAHILG----IEVCKEHLNKNIS-IAIEKLVQERLILLKM 422
E + + + + A +LG + K N + IE+L++ R +
Sbjct: 406 NEVDQDELNQVFNKWELLSELAGVLGLKVNLNQEKPKNNPELDTNKIEELIKNRSLAKAN 465
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K F AD IR L++ G L D +T WK
Sbjct: 466 KDFLLADKIRADLKNIGIDLIDKPKG-----VTEWK 496
>gi|326503818|dbj|BAK02695.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 563
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 184/533 (34%), Positives = 259/533 (48%), Gaps = 101/533 (18%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N++ +K F + MYVCG T YDF+H+G+AR + FDVLYR L++ E
Sbjct: 48 LQLFNSMTKKKELFVPRVEGKVGMYVCGVTPYDFSHVGHARAYVAFDVLYRYLKFLGYE- 106
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YVRN TDIDDKII+RA Q + ++ ++S+ +F+ D L CL PTH+PR
Sbjct: 107 -VDYVRNFTDIDDKIIKRANQNG------ETVTSLSSRFITEFLADVAELQCLPPTHEPR 159
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T HI +I LI II +G AY + ++ F + P Y S S R +D + G+RV
Sbjct: 160 VTEHIENIIKLITEIIKNGKAYVVDGDVYFSVDNFPEYLSLSGRILDHNRAGSRVAVDTR 219
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NPADF LWK + EP WESPWG GRPGWHIECSAMS+HYLG VFDIHGGG DLIFPH
Sbjct: 220 KRNPADFALWKAAKEGEPSWESPWGNGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIFPH 279
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS A E W+HNGF+N++ +KMSKS NF TI +++ +
Sbjct: 280 HENELAQSRAAY-PESEVKCWMHNGFINIDDQKMSKSVNNFFTIRDIITL-------YHP 331
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------- 347
+R ++ THY+ + + + L A + QT +
Sbjct: 332 LALRFFLMRTHYKSDANHSDKALEIASDRVYYIFQTLYDCDEVVSLHREENTSAPVPAEE 391
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLARESTKN---------------------- 378
A L ++ +DL T + +L + N
Sbjct: 392 QKLVDDHHKAFLESMSDDLRTTDVLDGFMELLKAINGNLNDLKKLQQKLEQQKKKQQQQK 451
Query: 379 -------------HDLLPIFNAS-------AHILGI-------EVCKEHLNKNI------ 405
D + NA ILG+ EV K+ K +
Sbjct: 452 KQQQKQQRPQKQPEDHIQALNALGAEIKHKLSILGLMPPSPLAEVLKQLKEKALKRAGLT 511
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ + ++ R+ K+F +D IRK+L SKG L D T W+
Sbjct: 512 EESLSEQIEHRIAARNNKQFEVSDQIRKELASKGIALMDEPT------GTVWR 558
>gi|308232507|ref|ZP_07416271.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu001]
gi|308369166|ref|ZP_07416800.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu002]
gi|308378377|ref|ZP_07482373.2| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu009]
gi|308213806|gb|EFO73205.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu001]
gi|308328560|gb|EFP17411.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu002]
gi|308352804|gb|EFP41655.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu009]
Length = 463
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 152/474 (32%), Positives = 227/474 (47%), Gaps = 46/474 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T + +F + P ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 1 MRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDI+DKI+ +A + + + F L L P+ +PR
Sbjct: 60 -VAFIRNVTDIEDKILAKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QMI +I+ +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 113 ATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG-- 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FPH
Sbjct: 171 KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFPH 230
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A A W+HNG++ + G KMSKS GN +++ +L+ +
Sbjct: 231 HENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR-------P 281
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSAL 355
+R + HYR ++F+ + +A G P AL
Sbjct: 282 AELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAEAL 341
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNIS 406
+DL+ A+ +H + E + D A ILG + +
Sbjct: 342 DDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESRDE 401
Query: 407 -----IAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
A++ LVQ R + + ++ AD IR +L+ G + D +
Sbjct: 402 TSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTADGPQW 455
>gi|78779620|ref|YP_397732.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|109894919|sp|Q319Z9|SYC_PROM9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78713119|gb|ABB50296.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 489
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 180/509 (35%), Positives = 252/509 (49%), Gaps = 74/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL +++ F+ ID +++Y CG TVYD H+G+AR I +DVL R L Y +
Sbjct: 1 MIKLFNTLSKRVEVFKPIDD-VVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E S + ++ KN +F KD L + P P
Sbjct: 58 FKVKYVQNFTDIDDKILKRAKEESSS------MKEVSEKNIIEFHKDMDSLGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ----KMGTRV 179
RATNHI + I + G+AY + ++ + NYG S + I EQ +
Sbjct: 112 RATNHICNICSFITILEDKGYAYSRDGDVYYSVFKNKNYGKLSNQNIQEQNINKQGRMAN 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K+NP DF LWK++ EP ++SPWGRGRPGWHIECSAM LG DIH GG D
Sbjct: 172 EENNKKQNPQDFALWKKAKNDEPFFDSPWGRGRPGWHIECSAMVKDELGDTIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI EL+++
Sbjct: 232 LIFPHHENEIAQSEAANG-KKLANYWLHNGMVNVNGQKMSKSLKNFKTIRELIKS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGI 346
+R ++ +YR+P+DFT + L A ++
Sbjct: 286 -GISPMTLRYFVMTVNYRKPLDFTEEALRSAAEAWKNINLALSFMDLTKGAFRSIDKNES 344
Query: 347 IDPAVLSALY---------------NDLNTVSAIQALHKLAR-----------------E 374
I+ L NDLNT AI ++ LA+ +
Sbjct: 345 IEEEYKEKLSFELSQKKLKFSEALGNDLNTAGAIAIIYDLAKPLKNFLNQFQRIEGLKID 404
Query: 375 STKNHDLLPIFN---ASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSSADY 430
+ LL F +LG++ + I I L+ ERL K K ++ AD
Sbjct: 405 LNEKFFLLENFKTLEKLTEVLGLKKEVLVKERKITEEEISSLINERLKAKKGKNYAKADE 464
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L+ KG L D + +T W +
Sbjct: 465 IRNLLKEKGIELID-----QSKEITTWIR 488
>gi|84488953|ref|YP_447185.1| hypothetical protein Msp_0124 [Methanosphaera stadtmanae DSM 3091]
gi|84372272|gb|ABC56542.1| CysS [Methanosphaera stadtmanae DSM 3091]
Length = 456
Score = 336 bits (862), Expect = 4e-90, Method: Composition-based stats.
Identities = 170/474 (35%), Positives = 248/474 (52%), Gaps = 50/474 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+Y+T+ R+ E + + + I+++VCGPTVYD++HIG+AR I FDV+ R L++
Sbjct: 1 MIKVYSTMTRQKEELK-VTNNKIKLFVCGPTVYDYSHIGHARTYISFDVIVRYLKHEGY- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++NITDIDDKII+RA++ N+ ++ + ++++KD L
Sbjct: 59 -SVFYLQNITDIDDKIIKRAKEN------NEDPLELSHRFEKEYLKDMETLNVSNVNFYA 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT H+ ++I IQ++I G+AY+ + FD S ++G S R +D+ + TR+
Sbjct: 112 RATEHMNEIINQIQDLIDKGYAYDTETGVYFDVSKFEDFGKLSNRNLDDLQ-NTRIQIDS 170
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF LWK+ +P WESPWG GRPGWHIE +A++ Y G +DIHGGGLDLIFP
Sbjct: 171 TKKDPKDFALWKKQ-DEQPYWESPWGNGRPGWHIEDTAITEAYFGPQYDIHGGGLDLIFP 229
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HH+ EIAQ + E W+H GFLN+ G KMSKS GNFITI ELLE
Sbjct: 230 HHDAEIAQMEASSGKEPLVEYWMHTGFLNVSGEKMSKSLGNFITIKELLEIVT------- 282
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------STSK 344
V R +L THYR PIDF+ L +AE L + T
Sbjct: 283 PEVYRFFVLSTHYRSPIDFSEDTLKQAENSLKRIQNTGKIIIDKLTEDNLPEGKVLDEDL 342
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
+ +A+ ND NT A+ L + K ++++ F ILG
Sbjct: 343 ELFKEEFFNAMNNDFNTPIALSNLFDFTHKINKAISSNEVSRNTLNNIVETFKDIESILG 402
Query: 394 IEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++ + ++ + + + R L K + AD IR +L + LED
Sbjct: 403 FDIIVEDDMVSDVSGDLLNIITEIREDLRSKKDWDLADKIRDELANLDITLEDK 456
>gi|31794757|ref|NP_857250.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
gi|57117128|ref|YP_177992.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|121639500|ref|YP_979724.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148663444|ref|YP_001284967.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148824786|ref|YP_001289540.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
gi|167967115|ref|ZP_02549392.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|215405629|ref|ZP_03417810.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
gi|215429081|ref|ZP_03427000.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
gi|215432553|ref|ZP_03430472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
gi|218755364|ref|ZP_03534160.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
gi|219559657|ref|ZP_03538733.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
gi|224991997|ref|YP_002646686.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253800621|ref|YP_003033622.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
1435]
gi|254234153|ref|ZP_04927477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
gi|254366143|ref|ZP_04982187.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
Haarlem]
gi|254552689|ref|ZP_05143136.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260184497|ref|ZP_05761971.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
gi|260198622|ref|ZP_05766113.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|260202768|ref|ZP_05770259.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
gi|289441010|ref|ZP_06430754.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289445174|ref|ZP_06434918.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
CPHL_A]
gi|289555844|ref|ZP_06445054.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
605]
gi|289571822|ref|ZP_06452049.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
gi|289572233|ref|ZP_06452460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
gi|289747417|ref|ZP_06506795.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
02_1987]
gi|289752295|ref|ZP_06511673.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
gi|289755709|ref|ZP_06515087.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
EAS054]
gi|289763759|ref|ZP_06523137.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
1503]
gi|294993700|ref|ZP_06799391.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
gi|297636255|ref|ZP_06954035.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
gi|297733248|ref|ZP_06962366.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
gi|306786487|ref|ZP_07424809.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu003]
gi|306790852|ref|ZP_07429174.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu004]
gi|306791175|ref|ZP_07429477.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu005]
gi|306795960|ref|ZP_07434262.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu006]
gi|306801208|ref|ZP_07437876.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu008]
gi|306805420|ref|ZP_07442088.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu007]
gi|306974052|ref|ZP_07486713.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu010]
gi|307081761|ref|ZP_07490931.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu011]
gi|307086377|ref|ZP_07495490.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu012]
gi|313660578|ref|ZP_07817458.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
gi|61248033|sp|P0A634|SYC_MYCTU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61248034|sp|P0A635|SYC_MYCBO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166225298|sp|A1KPR6|SYC_MYCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166225299|sp|A5U8Q5|SYC_MYCTA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781686|sp|C1AI39|SYC_MYCBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|31620354|emb|CAD95797.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
1) (CYSTEINE TRANSLASE) [Mycobacterium bovis AF2122/97]
gi|41352809|emb|CAE55617.1| CYSTEINYL-TRNA SYNTHETASE 1 CYSS1 (CYSTEINE--TRNA LIGASE 1) (CYSRS
1) (CYSTEINE TRANSLASE) [Mycobacterium tuberculosis
H37Rv]
gi|121495148|emb|CAL73634.1| Cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124603821|gb|EAY61784.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis C]
gi|134151655|gb|EBA43700.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis str.
Haarlem]
gi|148507596|gb|ABQ75405.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148723313|gb|ABR07938.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis F11]
gi|224775112|dbj|BAH27918.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253322124|gb|ACT26727.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
1435]
gi|289413929|gb|EFD11169.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|289418132|gb|EFD15333.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
CPHL_A]
gi|289440476|gb|EFD22969.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
605]
gi|289536664|gb|EFD41242.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis K85]
gi|289545576|gb|EFD49224.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T17]
gi|289687945|gb|EFD55433.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
02_1987]
gi|289692882|gb|EFD60311.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis T92]
gi|289696296|gb|EFD63725.1| cysteinyl-tRNA synthetase 1 cyss1 [Mycobacterium tuberculosis
EAS054]
gi|289711265|gb|EFD75281.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis GM
1503]
gi|308328975|gb|EFP17826.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu003]
gi|308332797|gb|EFP21648.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu004]
gi|308340288|gb|EFP29139.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu005]
gi|308343627|gb|EFP32478.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu006]
gi|308348094|gb|EFP36945.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu007]
gi|308352017|gb|EFP40868.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu008]
gi|308356654|gb|EFP45505.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu010]
gi|308360609|gb|EFP49460.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu011]
gi|308364197|gb|EFP53048.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
SUMu012]
gi|328460352|gb|AEB05775.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis KZN
4207]
Length = 469
Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats.
Identities = 149/475 (31%), Positives = 228/475 (48%), Gaps = 46/475 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + P ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 6 RLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDI+DKI+ +A + + + F L L P+ +P
Sbjct: 66 --VAFIRNVTDIEDKILAKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI +I+ +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 118 RATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG- 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 177 -KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN +++ +L+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
+R + HYR ++F+ + +A G P A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAEA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNK-- 403
L +DL+ A+ +H + E + D A ILG + +
Sbjct: 347 LDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESRD 406
Query: 404 -------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ +Q R + + ++ AD IR +L+ G + D +
Sbjct: 407 ETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTADGPQW 461
>gi|124267642|ref|YP_001021646.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
gi|124260417|gb|ABM95411.1| cysteinyl-tRNA synthetase [Methylibium petroleiphilum PM1]
Length = 474
Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats.
Identities = 174/494 (35%), Positives = 241/494 (48%), Gaps = 75/494 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I+NTL R F I+P ++RMYVCG T+YD H+G+AR M+ FDV+ R LR
Sbjct: 14 MSLRIHNTLTRSTEAFSPIEPGHVRMYVCGMTIYDLCHVGHARMMMAFDVVQRWLRVSG- 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII+RA + I +T + T +D L PTH+
Sbjct: 73 -LRVTYVRNITDIDDKIIKRALERGI------PIRQLTDEMTAAMHQDIGALGIEPPTHE 125
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++ M+ LI+ + +G AY ++ + P YG S + ID + G RV
Sbjct: 126 PRATEYVGAMVGLIEVLERNGLAYRVPGGDVNYSVRKFPGYGRLSGKSIDALRAGERVAV 185
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + P EP +++P+G GRPGWHIECSAMS LG+ FDIHGGG+
Sbjct: 186 LEGKDDPLDFVLWKAAKPEEPADAKYDAPFGPGRPGWHIECSAMSHALLGERFDIHGGGM 245
Query: 239 DLIFPHHENEIAQSCCADR---IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
DL FPHHENEIAQS A N+W+HNGFLN++ KMSKS GNF TI ++L
Sbjct: 246 DLQFPHHENEIAQSDGAFHLGSGHSFVNVWMHNGFLNVDNEKMSKSLGNFFTIRDIL--- 302
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKG 345
+ + IR ML HYR P +F+ L +A L +
Sbjct: 303 ----KRYDGETIRFFMLRVHYRSPFNFSDAGLDDARSGLRRLYTALEGTAVAPAEIDWTD 358
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--LPIFNASAHILGIEVCK----- 398
+A+ +D NT A+ L LA E ++ + + A LG+ +
Sbjct: 359 PHAARFKAAMDDDFNTPIAVSVLFDLAGEVNRSRSAQSAGLLRSLAGTLGLLQQEAAQYL 418
Query: 399 EHLNKNISIAIE---------------KLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + + IE +D IR L ++G +L+
Sbjct: 419 QGGSGVDTGHIEAQIAARAAAKAARDFA---------------ESDRIRDALAAQGIVLK 463
Query: 444 DYKNPDNGQRMTRW 457
D T W
Sbjct: 464 DT------PAGTTW 471
>gi|315607013|ref|ZP_07882019.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
gi|315251394|gb|EFU31377.1| cysteine--tRNA ligase [Prevotella buccae ATCC 33574]
Length = 515
Score = 336 bits (862), Expect = 5e-90, Method: Composition-based stats.
Identities = 151/520 (29%), Positives = 226/520 (43%), Gaps = 78/520 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M++ + IYNTL R F+ + N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MEQTLLIYNTLSRSKERFEPLHAPNVGMYVCGPTVYGDPHLGHARPAITFDILFRYLKHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ DDKI ++AR E + T ++
Sbjct: 61 GY--KVRYVRNITDVGHMEHDADDGDDKIEKKARLEQLE------PMEVAQYYTNRYHTA 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS----FS 166
L L P+ +P+AT HI + L++ I+ +G+AYE+N I FD
Sbjct: 113 MNALNVLPPSIEPQATGHIIEQEELVKQILDNGYAYESNGSIYFDIEKYNKDHKYGILSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR--------------- 210
R + + K++ ADF LWKR+ P W S +
Sbjct: 173 RSLENIVNESRSLAGVGEKRHQADFALWKRAMPEHIMRWHSVFKYKTGSYYENKKAKYRQ 232
Query: 211 ----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
G PGWH EC+AM YLG FDIHGGG+DL+FPHHE EIAQ+ + ++ W+
Sbjct: 233 ITIEGFPGWHCECTAMGRKYLGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DQMVRYWM 291
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
HN + + G+KM KS GNFIT+ + +++ IR +L HYR +DF+
Sbjct: 292 HNNMITINGQKMGKSLGNFITLEQFFTGSHDSLEQAYSPMTIRFFILSAHYRSTVDFSND 351
Query: 326 RLTEAEILLSKWPQ-----------------TSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
L +E L + T + A+ +D T I L
Sbjct: 352 ALKASEKGLERLMNGLSDLDRVPVSDTCDEVTDRFVKQLRQRCYDAMNDDFQTQLVISYL 411
Query: 369 HKLARESTKNHDLLPIFNA-------------SAHILGIEVCKEHLNKNISIA----IEK 411
+ D A + +LG++ N+ A ++
Sbjct: 412 FEACHVVNTLLDHKAHICADCLKELAETMRLFAFDLLGLKPENGDNNEAREEAYGKVVDM 471
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
++ R K ++++D IR L GF ++D K+
Sbjct: 472 VLSLRAKAKADKDWTTSDKIRDALADAGFEVKDTKDGVTW 511
>gi|291616610|ref|YP_003519352.1| CysS [Pantoea ananatis LMG 20103]
gi|291151640|gb|ADD76224.1| CysS [Pantoea ananatis LMG 20103]
Length = 437
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 171/459 (37%), Positives = 243/459 (52%), Gaps = 48/459 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD HIG+ R + FDV+ R LRY + V YVRNITDIDDKII+RA +
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVSRYLRYVGFD--VNYVRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++I +T++ + D L L P +PRAT HIP+++ L++ +I GHAY
Sbjct: 59 ------ESIETLTNRMIAEMHSDFDALGILPPDREPRATRHIPEIVELVEKLIARGHAYV 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++FD S +YG+ SR+ +D+ + G RV K+NP DF+LWK S EP W S
Sbjct: 113 AENGDVMFDVLSDVDYGALSRQDLDQLQAGARVEVADVKRNPMDFVLWKMSKADEPSWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG+GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQS CA N W+
Sbjct: 173 PWGQGRPGWHIECSAMNCKQLGAHFDIHGGGSDLMFPHHENEIAQSTCAHD-GPYVNYWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G + ++ KMSKS NF T+ ++L + + A +R ++ HYR +++
Sbjct: 232 HSGMVMIDREKMSKSLNNFFTVRDVL-------QHYDAETVRYFLMSGHYRSQLNYGEDN 284
Query: 327 LTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L +A L + + A+ +D NT A L +ARE +
Sbjct: 285 LNQARAALERLYTALRHTDRNAVADGGEAFEARFREAMDDDFNTPEAYSVLFDMAREVNR 344
Query: 378 --------NHDLLPIFNASAHILGIEVCKEHL--------NKNISIAIEKLVQERLILLK 421
+ L A++LGI + + N IE+ V+ R
Sbjct: 345 LKGEDMTAANALAAKLREIANVLGILQQEPEVFLQSSAQGNDEEVAEIERWVKARADARA 404
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
K ++ AD R +L + G I+ED G + + W++K
Sbjct: 405 AKDWAQADVARDKLNALGVIVED------GPQGSSWRRK 437
>gi|15617084|ref|NP_240297.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219682391|ref|YP_002468775.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|11134971|sp|P57558|SYC_BUCAI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254765184|sp|B8D815|SYC_BUCAT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|25293242|pir||G84986 cysteine-tRNA ligase (EC 6.1.1.16) [imported] - Buchnera sp.
(strain APS)
gi|10039149|dbj|BAB13183.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. APS
(Acyrthosiphon pisum)]
gi|219622124|gb|ACL30280.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Tuc7
(Acyrthosiphon pisum)]
gi|311086211|gb|ADP66293.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LL01
(Acyrthosiphon pisum)]
gi|311086789|gb|ADP66870.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. TLW03
(Acyrthosiphon pisum)]
gi|311087376|gb|ADP67456.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF99
(Acyrthosiphon pisum)]
gi|311087872|gb|ADP67951.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. JF98
(Acyrthosiphon pisum)]
Length = 464
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 176/482 (36%), Positives = 246/482 (51%), Gaps = 48/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL F I + + +YVCG TVYDF HIG+ R +VFD++ R LR+ +
Sbjct: 1 MLKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII ++ +E I+ T+ ++ KD L P +P
Sbjct: 61 --VKYVRNITDIDDKIISKSTKEKKK------INTFTASMIKEMHKDFDLLGISVPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T++I +I +I +I HAY N ++IF S PNYG+ SR+ + + G+R+P
Sbjct: 113 RVTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DFILWK S E W+SPWG+GRPGWHIECSA+++ + DIHGGG DL+F
Sbjct: 173 NMKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECSAITNVFFNNSIDIHGGGSDLLF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE +QS C + + N W+H G + L +KMSKS GN + +L +
Sbjct: 233 PHHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDC 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLS 353
A V+R L THYR PI + + L +A L +
Sbjct: 285 DAEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYN 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT + K+AR+ KN D+L A+ LG
Sbjct: 345 AMNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQK 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
LN I+ L+++R I + K + AD IRK+L S ILED + T W
Sbjct: 405 KTTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILEDLPDK------TIW 458
Query: 458 KQ 459
++
Sbjct: 459 RK 460
>gi|42525611|ref|NP_970709.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|61216253|sp|Q73RJ6|SYC_TREDE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|41815622|gb|AAS10590.1| cysteinyl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|325475275|gb|EGC78460.1| cysteinyl-tRNA synthetase [Treponema denticola F0402]
Length = 492
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 171/512 (33%), Positives = 245/512 (47%), Gaps = 76/512 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL K EF I +Y CGPTVYD+AHIGN R + D+L + LR+
Sbjct: 1 MSLKLHNTLGNKKEEFIPIHEGKAGVYGCGPTVYDYAHIGNLRTYVFQDILVKTLRFLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ VT+V NITD+ +DK+++ A + S+ I T+ F DT
Sbjct: 61 D--VTHVMNITDVGHLTDDEDSGEDKMVKSAEERGKSVL------EIAEFYTKAFFNDTE 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P +AT HI +MI LI+ I +GH Y A + +D S+ P YG + +++
Sbjct: 113 RLNIERPGIVCKATEHINEMIELIKRIEANGHTYMAGGNLYYDISTFPKYGELANINLED 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
K G R+ +K+NP DF+LW + E W+SPWGRG PGWHIECSAMS YLG+
Sbjct: 173 LKAGARIEIDKNKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D I HH NEIAQS A +K N W+HN FL + KMSKS G+FI +
Sbjct: 233 QIDIHKGGIDHIRVHHTNEIAQSEGATG-KKWVNYWLHNEFLVMNKGKMSKSAGSFIILE 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--PQTSTSKGII 347
+++ + + A R +L HYR + F+ + + A+ G+
Sbjct: 292 DVIN------KGFSALDYRFLLLGGHYRSQLTFSWEAMETAKNGRKNLNNRVAKWLDGLS 345
Query: 348 DPAVLSA-------------------------------LYNDLNTVSAIQALHKLAREST 376
D ++ + +DL+T A+ L L +E
Sbjct: 346 DSEIMEYAALTENLNLKSAKDMIKNEKARSCFDNFIAAMEDDLSTPKALSELQLLIKEKD 405
Query: 377 K-NHDLLPIFNASAHILGIEVCKEHLN--------KNISIAIEKLVQERLILLKMKKFSS 427
D+L + A ILGI++ +E N + I KL++ER K +
Sbjct: 406 IPQKDVLTVLAAMDSILGIKLIEESFNTLKDKGSIEIDESEILKLIEERASAKLDKNYKL 465
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AD IR +L+ G ILED T WK+
Sbjct: 466 ADEIRDKLKGMGIILEDQ------AGKTTWKK 491
>gi|219681836|ref|YP_002468222.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
gi|257471540|ref|ZP_05635539.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. LSR1
(Acyrthosiphon pisum)]
gi|254765183|sp|B8D9R3|SYC_BUCA5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219624679|gb|ACL30834.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. 5A
(Acyrthosiphon pisum)]
Length = 464
Score = 336 bits (861), Expect = 5e-90, Method: Composition-based stats.
Identities = 175/482 (36%), Positives = 246/482 (51%), Gaps = 48/482 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL F I + + +YVCG TVYDF HIG+ R +VFD++ R LR+ +
Sbjct: 1 MLKIFNTLTSTKEIFTPIKKNRVNLYVCGVTVYDFCHIGHGRTFVVFDMIVRYLRFSGFQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII ++ +E I+ T+ ++ KD L P +P
Sbjct: 61 --VKYVRNITDIDDKIISKSTKEKKK------INTFTASMIKEMHKDFDLLGISVPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T++I +I +I +I HAY N ++IF S PNYG+ SR+ + + G+R+P
Sbjct: 113 RVTDYIDNIIRIITTLIKKKHAYIHKNGDVIFSIDSDPNYGTLSRQSLTSLESGSRIPLN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DFILWK S E W+SPWG+GRPGWHIEC+A+++ + DIHGGG DL+F
Sbjct: 173 NMKKNPLDFILWKSSNKEEYSWDSPWGKGRPGWHIECTAITNVFFNNSIDIHGGGSDLLF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE +QS C + + N W+H G + L +KMSKS GN + +L +
Sbjct: 233 PHHENERSQSICFNN-KSMINFWMHTGMVILNNKKMSKSLGNVYFLRNIL-------KDC 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------VLS 353
A V+R L THYR PI + + L +A L +
Sbjct: 285 DAEVLRYFFLSTHYRHPIYYCEKNLDQAYTSLKYLYTALYDTNPFFNNEEGLNFELEFYN 344
Query: 354 ALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEVCKEH----- 400
A+ +D NT + K+AR+ KN D+L A+ LG
Sbjct: 345 AMNDDFNTPAVFSIFFKIARKINFLKNKDILKTNKFAFRLKYLANNLGFLFQDPKEFLQK 404
Query: 401 ---LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
LN I+ L+++R I + K + AD IRK+L S ILED + T W
Sbjct: 405 KTTLNLLTLKEIQLLIEKRNIARQSKLWQEADNIRKKLMSLDIILEDLPDK------TIW 458
Query: 458 KQ 459
++
Sbjct: 459 RK 460
>gi|145590332|ref|YP_001152334.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|189082071|sp|A4WH15|SYC_PYRAR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145282100|gb|ABP49682.1| cysteinyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 476
Score = 336 bits (861), Expect = 6e-90, Method: Composition-based stats.
Identities = 168/471 (35%), Positives = 238/471 (50%), Gaps = 42/471 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT R++ EF P R YVCG T YD H+G+ R + FD+ R L E
Sbjct: 1 MRIYNTATRQLEEFVTYTPRLARGYVCGITPYDSVHVGHGRVYVFFDMFRRYLEAQGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII RAR+E + + + +F + + RL P+
Sbjct: 60 -VRLVINFTDIDDKIINRAREEFGAEAYKR-WREVPERYIAEFFEMSKRLFIKPAYAYPK 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I+ ++ G+AY + + F+ +PNYG SR++I+E G RV +
Sbjct: 118 VTENVEDMVSWIKALVEKGYAYTAPDGSVYFEVGKVPNYGVLSRQRIEELMAGARVEPEP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK TP EP WESPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWESPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN +T+ E L +
Sbjct: 238 HHENEIAIAKAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNVVTLREALS-------KYS 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
+RLA M+HYR+P++F+ + L +AE + G
Sbjct: 291 GEALRLAYAMSHYRKPMEFSYEVLDQAEEMAKTIYTAYDELGQAVGDAGEEDKEALDYGR 350
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARES-------------TKNHDLLPIFNASAHILG 393
+AL +D +T A Q + LAR +L + A ILG
Sbjct: 351 YVEEFYAALEDDFSTPQAAQQFYGLARYIISTVLHKIDKISRNTALSILSQYVKMADILG 410
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ +E + K + A++ V+ R L K +++ ADYIR++L G L D
Sbjct: 411 VLERRE-VPKEVEEAVKAAVEVRAKLRKERQYQLADYIRERLAGIGVELHD 460
>gi|210632458|ref|ZP_03297386.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
gi|210159553|gb|EEA90524.1| hypothetical protein COLSTE_01283 [Collinsella stercoris DSM 13279]
Length = 493
Score = 335 bits (860), Expect = 6e-90, Method: Composition-based stats.
Identities = 183/500 (36%), Positives = 250/500 (50%), Gaps = 70/500 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYN+ + +F I+ +RMYVCGPTVYD HIGNAR I FDV+ R L E
Sbjct: 1 MKIYNSATHQKEDFHPIEEGRVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ +N+TD+DDKII RA ++ + + ++ + +F+ L P +PR
Sbjct: 60 -VTFAQNLTDVDDKIINRANEQGRTAE------EVATEFSNKFIGVMRAANVLDPDARPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I MI +I+ +I HAY N ++ F S P+YG S R ID+ +G R+ E
Sbjct: 113 ATKEIGAMIGMIKTLIEGDHAYAADNGDVYFSVRSDPSYGEVSGRNIDDLMVGARIEENE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W+SPWG GRPGWH EC+AM YLG DIHGGG DL FP
Sbjct: 173 DKRDPLDFALWKAAKPGEPSWKSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ CA E AN W+H G L ++G KMSKS GNF T+ E+LE
Sbjct: 233 HHENECAQATCAWH-EGFANTWMHTGMLLVDGEKMSKSLGNFFTLAEVLE-------KHS 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
A +RL ML THYR P+DF+ +RL AE L++ T +
Sbjct: 285 AAALRLLMLQTHYRSPLDFSWERLEGAENSLARIAGTCRNLKWAADHVEGEPNAELAEAL 344
Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHI--- 391
+ + +D NT AI A +L E+ K + A A +
Sbjct: 345 TAAMEKAAADYEACMDDDFNTAGAIAAYFQLVTEANKYLEQAAGAVDEVTARACAAVIAG 404
Query: 392 ----LGIEV-----------------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
LG+E+ + ++ A EK+++ R K +++AD
Sbjct: 405 ALAQLGVELPVIEEPLPVGLLGVAAGLTGYTGDSVDEAAEKILEARAAARAAKDWTTADA 464
Query: 431 IRKQLESKGFILEDYKNPDN 450
IR QL G +ED
Sbjct: 465 IRDQLRDMGLAIEDTAAGSR 484
>gi|313676536|ref|YP_004054532.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
gi|312943234|gb|ADR22424.1| cysteinyl-tRNA synthetase [Marivirga tractuosa DSM 4126]
Length = 495
Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats.
Identities = 158/503 (31%), Positives = 229/503 (45%), Gaps = 64/503 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K++KI N+L R+ F+ I+P + MYVCGPTVY AH+GN R + FDV+ R LR+
Sbjct: 1 MDKELKIQNSLTRQKEIFKPINPPFVGMYVCGPTVYSDAHMGNVRTFMSFDVINRYLRHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI ++A+ E N I + F +
Sbjct: 61 GY--KVRYVRNITDVGHLVDDADDGEDKIGKKAKLE------NVEPMEIVQRYANGFHRV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSR 167
L P +P AT HI + I + + ++ +G AYE N I FD S S
Sbjct: 113 MDLFNILEPDIEPTATGHIVEQIEINKKLLENGWAYEKNGSIYFDVSKYNEAHEYGILSG 172
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
RKI++ + + + KKNP DF LWK+++ W SPW G PGWH+EC+ MS+
Sbjct: 173 RKIEDLQSNTRTLDGQDDKKNPLDFALWKKASDEHIMRWPSPWSDGFPGWHLECTVMSTK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG+ FDIHGGG+DL FPHHE EIAQ+ A+ N WIH L + G+KMSKS GN
Sbjct: 233 YLGETFDIHGGGMDLKFPHHECEIAQAVGANGKTP-VNYWIHTNMLTVNGQKMSKSLGNS 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
+L+ + + +R M+ THY +DF+ + L A+ +
Sbjct: 292 FLPTQLVSGNHDMLEQGYTPMTVRFFMMQTHYSSTLDFSNEALKAAQKGYRRLANGLKII 351
Query: 338 -------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ + ++ +D NT I L +L ++ H
Sbjct: 352 KSLVFKNDDGRKNEKAISQIEQACEGCYKSMNDDFNTAKTIAQLFELLKKINSLHTGQLK 411
Query: 385 FNASA----------------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
F ILG+ KE + I+ L++ K +
Sbjct: 412 FGEIGQDAFENLSNTYQTFMVEILGL---KEETPTEVDPIIDALLEFYKKAKAEKNYDQV 468
Query: 429 DYIRKQLESKGFILEDYKNPDNG 451
D IR L+S I++D K +
Sbjct: 469 DEIRTILKSNKLIIKDLKTGVDW 491
>gi|312194278|ref|YP_004014339.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
gi|311225614|gb|ADP78469.1| cysteinyl-tRNA synthetase [Frankia sp. EuI1c]
Length = 506
Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats.
Identities = 159/520 (30%), Positives = 233/520 (44%), Gaps = 88/520 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R++ F+ + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MSLHLYDTRTRRVRPFEPLRPGHVGVYVCGPTVQSAPHVGHLRSAVAFDLLRRWLLESGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+N+TDIDDKII A +E S+ + ++ T+ F + L PT Q
Sbjct: 61 --AVTYVQNVTDIDDKIIVNADREGVSV------WELATRETRSFDDAYRAVGILPPTIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+M LI ++ G+AYE + + F +YG+ S ++ D + V +
Sbjct: 113 PRATGHIPEMFALIGELMAAGYAYEGDGSVWFRVGRFGDYGALSNQRPDAMQASAEV--E 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 171 AGKEDPRDFALWKAARPGEPAWDSPWGSGRPGWHLECSAMAGKYLGDVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCCA--------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
PHHENE AQ+ CA + A W+H G L G KMSKS GN + + L
Sbjct: 231 PHHENERAQTVCASAARAHDGSGEPEMARYWMHVGLLTTGGTKMSKSLGNSFFVTDALAQ 290
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------- 347
+ V+R +L HYR ++++ L E+ + + I
Sbjct: 291 VR-------PQVLRYHLLSAHYRSSLEYSPDALAESAAGYGRVETFVRNALDILGSPEEA 343
Query: 348 -----------------------------------------DPAVLSALYNDLNTVSAIQ 366
A +AL +DL A+
Sbjct: 344 ASLAAEASPAAAPRPAKSRGKGRPQGRAAAGPAGTASPAAAWAAFSAALDDDLGVSRALA 403
Query: 367 ALHKLARESTKNHDL---------LPIFNASAHILGIEVCKE------HLNKNISIAIEK 411
AL E L + +LG++ K+ + + +E
Sbjct: 404 ALFGAVAEGNLVLSKTHRGELAGWLVVVRRMLTVLGLDPVKQWPAAGGQVRAALDGVMEI 463
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ R ++ AD IR +L G I++D
Sbjct: 464 VRDLRSSARARLDYAEADSIRDRLRDAGIIVDDTGEGQRW 503
>gi|84515618|ref|ZP_01002980.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
gi|84510901|gb|EAQ07356.1| cysteinyl-tRNA synthetase [Loktanella vestfoldensis SKA53]
Length = 477
Score = 335 bits (860), Expect = 7e-90, Method: Composition-based stats.
Identities = 204/485 (42%), Positives = 257/485 (52%), Gaps = 57/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I+++NT RK +F ID N+RMY+CGPTVYD AH+GNARP +VFDVL+RLLR YG K
Sbjct: 4 IRLHNTKSRKREDFVPIDARNVRMYLCGPTVYDRAHLGNARPSLVFDVLFRLLRQIYGAK 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI + AI IT++ + D L L PTH+PR
Sbjct: 64 HVTYVRNFTDVDDKI------NARAAAAGRAIGDITAETIGWYHADLDALGALRPTHEPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I QMI +I ++I HAYEA ++F S YG+ S R ID+ G RV +
Sbjct: 118 ATQYIAQMIAMITDLIAKNHAYEAEGHVLFAVESYAEYGALSGRSIDDMIAGARVEIAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK S PGW+SPWG GRPGWHIECSAM+ LG FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWDSPWGYGRPGWHIECSAMAHDLLGDSFDIHGGGNDLQFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA + A WIHN L +EG+KMSKS GNF TI +LL+ + P
Sbjct: 238 HENEIAQSACAHPHGEFARYWIHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGIPG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
VIRL ML THY + +D+T R +EA++ L +W G D
Sbjct: 292 EVIRLVMLGTHYGKTMDWTEARRSEADLTLRRWYGILHGHGFGPDLIRALKADGKWQADA 351
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
L L NDLNT AI LH LA+ K L F +LG+ +
Sbjct: 352 EFLGVLANDLNTPGAIARLHVLAK--GKTPTALAGFAHGLDMLGLVRDWAAIPLLDGAEA 409
Query: 402 NKNISIAIEKLVQERLILLKM------------KKFSSADYIRKQLESKGFILEDYKNPD 449
+++ A+ K ++ AD +R L S G + D
Sbjct: 410 GPDVTPAV--------AARVDALLAARAAARAAKDWAQADDVRDILTSAGVQVTDVGGQA 461
Query: 450 NGQRM 454
Sbjct: 462 TWSPG 466
>gi|18312206|ref|NP_558873.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|21264010|sp|Q8ZYD8|SYC_PYRAE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|18159644|gb|AAL63055.1| cysteinyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
Length = 474
Score = 335 bits (860), Expect = 8e-90, Method: Composition-based stats.
Identities = 171/473 (36%), Positives = 240/473 (50%), Gaps = 42/473 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT R++ EF P R YVCG T YD H+G+ R + FD+ R L
Sbjct: 1 MGVRIYNTATRQVEEFVTYVPKLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLEARGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V V N TDIDDKII +AR+E + + +F + + +L
Sbjct: 61 E--VRLVINFTDIDDKIINKAREEFGHDAYKR-WKEVPERYIAEFFEMSNKLFIKPAHAY 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T ++ +M+ I ++ G+AY + + F+ +PNYG SR+KI+E G RV
Sbjct: 118 PRVTENVNEMVAWISTLVEKGYAYVAPDGSVYFEVGKVPNYGVLSRQKIEELIAGARVEP 177
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ KKNP DF LWK TP EP W SPW GRPGWH+EC MS+ YLG FD HGGG DLI
Sbjct: 178 EPGKKNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKYLGAPFDFHGGGADLI 237
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L
Sbjct: 238 FPHHENEIAIAKAYYGLDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVLS-------K 290
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------- 344
+ +RLA M+HYR+P++F+ + L +AE ++
Sbjct: 291 YSGEALRLAYAMSHYRKPMEFSFELLDQAEEMVKTLYTAYDELSQAVADASDEDKEKLEY 350
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASAHI 391
G + +AL +D +T A Q L+ LAR D+L + A I
Sbjct: 351 GKYIESFYAALEDDFSTPQAAQQLYGLARYIISTVLHRIDKASRQTAIDVLTQYVKMADI 410
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ +E + K + I+ +V+ R L + K + ADY+R++L G L D
Sbjct: 411 LGVLERRE-IPKEVEEVIKAVVEARARLRREKMYQLADYLRERLAGIGVELHD 462
>gi|330836349|ref|YP_004410990.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
gi|329748252|gb|AEC01608.1| cysteinyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
Length = 478
Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats.
Identities = 160/489 (32%), Positives = 234/489 (47%), Gaps = 52/489 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+YNT+ R I EFQ I+ + MY CGPTVY++AHIGN R + DVL R+L Y
Sbjct: 1 MPFSVYNTMSRTIEEFQPIEEGKVGMYCCGPTVYNYAHIGNLRTYVFEDVLRRVLSYAGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+++ AR++ S+ I S T F +D
Sbjct: 61 --NVKHVMNITDVGHLTDDGDAGEDKMLKSAREKGMSV------WDIASFYTDAFFRDFD 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS--RRKI 170
L + P +AT+H+ QMI LIQ + GH Y A + F + P+YG + +
Sbjct: 113 ALGNMRPQIICKATDHVQQMITLIQKLEEGGHTYAAGGNVYFSIDTFPDYGKLAGLHLHM 172
Query: 171 DEQKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
DE K G R+ K+NP DF+LW + W+SPWGRG PGWHIECSAMS YL
Sbjct: 173 DELKAGARIEVDTFKRNPKDFVLWFTNSKFGEQAMMWDSPWGRGYPGWHIECSAMSMTYL 232
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G FD+H GG+D I HH NEIAQS A W+H FL + KMSKS+G+F+T
Sbjct: 233 GDKFDLHCGGIDAIPVHHTNEIAQSEAATGDHPWVKYWMHGEFLLNDTGKMSKSSGSFLT 292
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----RLTEAEILLSKWPQTSTS 343
+ L++ + + R L HYR + F+ + + L+ + +
Sbjct: 293 LQVLID------KGYEPLDYRFFCLGAHYRTQLRFSWEALDGARSSRRNLVGRIGRLKAE 346
Query: 344 KGIIDPA-----------VLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHI 391
GI P ++NDLN A+ + L ++ + D L + I
Sbjct: 347 AGIPSPQPGETASGYLANFTEQIFNDLNMPRALAVMWGLLKDDSVSAADKLAVLLEMDKI 406
Query: 392 LGIEVCKEHLNKN-------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
G+ K ++ +LV+ R K + F++AD +R +LE G+I+ D
Sbjct: 407 FGLSFDKVQPQEDSTPVEGADDPEALELVRLRAEAKKSRDFATADRLRAKLEGIGYIVTD 466
Query: 445 YKNPDNGQR 453
+ +
Sbjct: 467 TPSGTTLTK 475
>gi|268610792|ref|ZP_06144519.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
gi|268611696|ref|ZP_06145423.1| cysteinyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
Length = 473
Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats.
Identities = 154/486 (31%), Positives = 233/486 (47%), Gaps = 52/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YN+L K EF + + MY CGPTVY +AHIGN R I+ D+L + LRY +
Sbjct: 1 MYLYNSLSHKKEEFIPHEEGKVSMYTCGPTVYHYAHIGNLRSYIMEDILEKYLRYTGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F D +L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKFYTDAFFDDCKKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT +I + I +I +++ G+AYEA I FDTS + Y F+ ++
Sbjct: 113 NIKTPDVVVPATTYIDEFIRVISSLMEKGYAYEAGGNIYFDTSKLDKYYVFNDFNEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V +K+N ADF+LW + E W+SPWG G PGWHIECS +S LG+
Sbjct: 173 VGVRDGVEADENKRNKADFVLWFTKSKFDDQELKWDSPWGIGYPGWHIECSCISMKNLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D FPHH NEIAQS K N W H LN KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHILHLNTNDGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L E + + + R L +HYR+ + F+ L A+ K +
Sbjct: 292 LLEE------KGYKPVIYRFFCLQSHYRKSLVFSWDNLDNAKAAYGKLIEKIAPLTQESG 345
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
+D A AL +D+NT AI L+ + + L + N +LG+++
Sbjct: 346 GDIDKAEYERLDKAFREALDSDVNTAMAITVLYDVLKSKANAATKLALINDFDKVLGLDL 405
Query: 397 ---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ + +I + +LV++R K K F+ AD +R ++ S G+ +++ +
Sbjct: 406 VANAKLFLEESANASADIPAEVMELVEQRKEARKAKDFALADELRDKIASLGYEVKETRQ 465
Query: 448 PDNGQR 453
+
Sbjct: 466 GTEISK 471
>gi|17545886|ref|NP_519288.1| cysteinyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
gi|21264003|sp|Q8Y077|SYC_RALSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|17428181|emb|CAD14869.1| probable cysteinyl-trna synthetase (cysteine--trna ligase)(cysrs)
protein [Ralstonia solanacearum GMI1000]
Length = 465
Score = 335 bits (859), Expect = 8e-90, Method: Composition-based stats.
Identities = 173/504 (34%), Positives = 248/504 (49%), Gaps = 85/504 (16%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KIYNTL R+ F I+P +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LKIYNTLAREKQTFVPIEPGRVRMYVCGMTVYDYCHVGHARVMVVFDMVQRWLRAS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII+RA + + I +T++ +D L P
Sbjct: 60 GYD--VTYVRNITDIDDKIIKRAVENG------ETIGALTNRFIAAMHEDADALGVQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT ++PQM+ +I + +G AY+ A+ ++ + P YG S + +++ + G RV
Sbjct: 112 REPRATEYVPQMLSMIGRLQDNGLAYQAADGDVNYAVRKFPGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK + EP W SPWG GRPGWHIECSAMS LG FD+HGG
Sbjct: 172 AANDAKQDPLDFVLWKSAKADEPAESRWASPWGEGRPGWHIECSAMSCDLLGTHFDLHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A N W+HNGF+ + KMSKS GNF TI ++L
Sbjct: 232 GADLQFPHHENEIAQSEGASG-STFVNTWMHNGFVRVNDEKMSKSLGNFFTIRDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------STSKG 345
+ + V+R +L +HYR ++++ L +A L++
Sbjct: 287 ---KVYDPEVVRFFILRSHYRSDLNYSDVHLDDARHALTRLYTALKDVPAEAQARPDWNE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKEHL-- 401
A+++D NT A+ L +LA E K L A ++G+ V H
Sbjct: 344 PHGKRFREAMHDDFNTPVAMAVLFELATEVNKTRSPALASQLAALGGVMGLLVRDPHAFL 403
Query: 402 --------NKNISIAIEKL------------------VQERLILLKMKKFSSADYIRKQL 435
+ + +E + AD L
Sbjct: 404 QGGVGAAADGLDAAEVEARIEARRAAKAARDFARADGI-------------RAD-----L 445
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ G +LED +T W++
Sbjct: 446 LAAGIVLEDKPGG-----VTEWRR 464
>gi|289705924|ref|ZP_06502301.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
gi|289557352|gb|EFD50666.1| cysteine--tRNA ligase [Micrococcus luteus SK58]
Length = 485
Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats.
Identities = 162/490 (33%), Positives = 236/490 (48%), Gaps = 56/490 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+ Y+T +I +F+ + P +Y CG TV H+G+ R IVFD+L R L
Sbjct: 4 RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEATG--LR 61
Query: 66 VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
VT VRN+TDIDDKI++R+ H + P + + + + F L
Sbjct: 62 VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT H+P+M LI+ ++ GHAY A ++ FD S YG +R+++++ +
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK + P EP WESPWG GRPGWH+ECSAMS+ YLG FD
Sbjct: 182 APDADPR-GKRDPRDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A A W+HNG + G KMSKS GN I+ E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSTAAGDG--FARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
+ +R + HYR +D+ L EAE + + +
Sbjct: 299 GMAR-------PTAVRYFLGQAHYRSQLDYRPGALDEAEAAVERIEGFTARARAAGAVPP 351
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
+ A +A+ +DLN A+ ALH+ R L A
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411
Query: 389 AHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LG++ E + + + ++ R K +++AD IR L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471
Query: 442 LEDYKNPDNG 451
LED +
Sbjct: 472 LEDGADGATW 481
>gi|225011916|ref|ZP_03702354.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
gi|225004419|gb|EEG42391.1| cysteinyl-tRNA synthetase [Flavobacteria bacterium MS024-2A]
Length = 492
Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats.
Identities = 151/497 (30%), Positives = 226/497 (45%), Gaps = 56/497 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +YN+L K F++I P+++ MYVCGPTVY H+GN R I FD+++R L++
Sbjct: 1 MDSTLVLYNSLNGKKETFKSILPNHVGMYVCGPTVYSNVHLGNCRTFISFDLIFRYLQHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD +D+I ++AR E + + T F
Sbjct: 61 GY--KVRYVRNITDAGHLENDADEGEDRIAKKARLESIE------PMEVVQRYTVDFRDT 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
+ L P+ +P AT HI + I LI+ II G+AYE N + FD + YG S
Sbjct: 113 MAQFNALVPSIEPTATGHIVEQIELIKEIIEQGYAYEVNGSVYFDVIKFNKDIPYGKLSG 172
Query: 168 RKIDEQKMG-TRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R I++ + + KKNP DF LWK++ P+ W SPW G PGWH+EC+AMS+
Sbjct: 173 RNIEDLIHNTRTLDGQSDKKNPQDFALWKKAEPVHIMRWPSPWSEGFPGWHLECTAMSTK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL FPHHE EIAQ+ + + N W+H L L G+KM+KS GN
Sbjct: 233 YLGSQFDIHGGGMDLKFPHHECEIAQAESIHK-KSPVNYWLHANMLTLNGKKMAKSTGNN 291
Query: 286 ITINELLETKKFGGRS-WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
I E+ + + + +R +L HYR +D + L +E +
Sbjct: 292 ILPGEMFSGENSIFKKAFSPMTVRFFILQAHYRSIVDLSESALEASEKGFQRLIDGISKL 351
Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA--- 387
+ +A+ +D N+ I L + + L N
Sbjct: 352 ERLPIGDKTSDFDLVKWKNKCYAAMNDDFNSPLLIAHLFDAVKYINAVDNGLQQINKDDL 411
Query: 388 ----------SAHILGIEVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRK 433
+LG+ ++ +N + A+ +++ R K F ++D IR
Sbjct: 412 KDLSKLINDFFFDVLGLLNEDDNNKENGGVQLDGALNLILELRNKARASKDFETSDLIRD 471
Query: 434 QLESKGFILEDYKNPDN 450
L + D
Sbjct: 472 SLSELNIQINDTSEGTT 488
>gi|15843193|ref|NP_338230.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|13883546|gb|AAK48044.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|323717774|gb|EGB26972.1| cysteinyl-tRNA synthetase 1 cysS1 [Mycobacterium tuberculosis
CDC1551A]
Length = 469
Score = 335 bits (859), Expect = 9e-90, Method: Composition-based stats.
Identities = 152/475 (32%), Positives = 227/475 (47%), Gaps = 46/475 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + P ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 6 RLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDI+DKI+ +A + + + F L L P+ +P
Sbjct: 66 --VAFIRNVTDIEDKILAKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI +I+ +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 118 RATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG- 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 177 -KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN +++ +L+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
+R + HYR ++F+ + +A G P A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAEA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNI 405
L +DL+ A+ +H + E + D A ILG + +
Sbjct: 347 LDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESRD 406
Query: 406 S-----IAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
A++ LVQ R + + ++ AD IR +L+ G + D
Sbjct: 407 ETSAALAAVDVLVQAELQNREKAREQRNWALADEIRGRLKRAGIEVTDTAEGPQW 461
>gi|227533678|ref|ZP_03963727.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
gi|227188662|gb|EEI68729.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Lactobacillus
paracasei subsp. paracasei ATCC 25302]
Length = 461
Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats.
Identities = 170/486 (34%), Positives = 244/486 (50%), Gaps = 61/486 (12%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ RK F + P IRMYVCGPTVY++ HIGNAR I FD + R Y VTYV
Sbjct: 1 MSRKKETFTPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGY--KVTYVS 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII A + +A + + F++DTT L T PRA+ IP
Sbjct: 59 NFTDVDDKIINAAHKTG------EAPLDLAQRFIDAFMEDTTALGIEPATAHPRASQMIP 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA- 189
+I +Q++I +AY + ++ + +YG S + +DE + G +
Sbjct: 113 DIIDFVQDLIDKEYAYAVDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKE 172
Query: 190 ---DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
DF LWK + P E WESPWG+GRPGWHIECS MS+ LG FDIHGGG DL FPHHE
Sbjct: 173 DPIDFALWKAAKPGEISWESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHE 232
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQS ++ W+HNGF+ + + KMSKS GNFIT++++ ++
Sbjct: 233 NEIAQSEAKTD-KQFVRYWMHNGFVTIGEDDEKMSKSLGNFITVHDI-------RKTVDP 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------PQTSTSKG 345
V+R M T YR PI ++ L A L++ PQ +
Sbjct: 285 QVLRFFMAGTQYRMPIRYSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQ 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGI 394
+ ++A+ +D+N + + L LA+ + +DLL ++A I G+
Sbjct: 345 TLKDRFVTAMDDDINVQNGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGV 404
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ KN+ I+ LV+ R K F+ +D IR QL ++G ILED +
Sbjct: 405 VFADQ---KNLDADIDALVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT------PQG 455
Query: 455 TRWKQK 460
TRW+++
Sbjct: 456 TRWRRQ 461
>gi|154249366|ref|YP_001410191.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
gi|171769335|sp|A7HKV1|SYC_FERNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|154153302|gb|ABS60534.1| cysteinyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 470
Score = 335 bits (859), Expect = 1e-89, Method: Composition-based stats.
Identities = 157/478 (32%), Positives = 231/478 (48%), Gaps = 48/478 (10%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
I +TL + + ++P ++MYVCGPTVY++ HIGNARPM+VFD L R L + V
Sbjct: 6 ITDTLSKSKVPLETLEPGVVKMYVCGPTVYNYIHIGNARPMVVFDALRRFLEFVGY--RV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V+N TDIDDKII A++ N + ++ D L A + PR T
Sbjct: 64 IMVQNFTDIDDKIINEAKE------WNVDWKTVADTFIAEYFHDAQLLGVRAANYHPRTT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+ + ++ I+ +I AY N ++ F + +YG S + +D+ + G RV K
Sbjct: 118 DFVKDIVEAIETMIKKDFAYPAENGDVYFSVRKLRDYGKLSGKNLDDLRAGARVDVNELK 177
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K+P DF+LWK + P EP W+SPW GRPGWHIECS MS LG +FDIHGGG DLIFPHH
Sbjct: 178 KDPLDFVLWKSAKPGEPTWDSPWCNGRPGWHIECSVMSQKLLGDMFDIHGGGEDLIFPHH 237
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
E+EIAQS + A W+HNG + + G KMSKS GN + E + R +
Sbjct: 238 EDEIAQSEALTG-KPPAKYWMHNGMIIVRGDKMSKSLGNTFMVREAV-------RRYTKD 289
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGIIDP 349
++L +L HYR P++F+ + L + + P+
Sbjct: 290 GVKLFLLSKHYRSPMEFSDEILQDNMRAAQRVHNALNRFTEKYPYPLVPKIDEEMENFID 349
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS----------AHILG-----I 394
+ AL +D NT A+ L +E K+ D A +LG I
Sbjct: 350 RFVEALSDDFNTPVALSILFDTVKELNKSMDEGNDERALKMYHLVKRIYGPVLGVFDSEI 409
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ ++ + I+ ++ R K K+F AD +R L + L D +
Sbjct: 410 QKQQQVNSEQLDQLIQGIINLRNEYRKNKQFEIADKLRDALLNAKIKLLDTPEGTKYE 467
>gi|119386770|ref|YP_917825.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
gi|187629836|sp|A1B9D5|SYC_PARDP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119377365|gb|ABL72129.1| cysteinyl-tRNA synthetase [Paracoccus denitrificans PD1222]
Length = 462
Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 193/461 (41%), Positives = 264/461 (57%), Gaps = 21/461 (4%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R+ F+ IDP N+R+Y+CGPTVYD AH+GNARP++V DVL RLLR+ G
Sbjct: 3 EIRLTNTRTRRKEVFRPIDPQNVRLYLCGPTVYDRAHLGNARPVVVIDVLVRLLRHLLGA 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A ++ + + I T + + D L P
Sbjct: 63 DHVTYVRNFTDVDDKINATALARKEAGTPGTLEELIRERTHETIGWYHADMDALGAERPD 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+PRAT++I +MI +I+ +I GHAY + ++F S +YG S R +D+ G RV
Sbjct: 123 HEPRATDYIGEMIAMIETLIAGGHAYARDGHVLFRVRSYADYGKLSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG+ FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGESFDIHAGGIDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA A +W+HN L +EGRKMSKS GNF T+ +LL+ +
Sbjct: 243 QFPHHENEIAQSCCAHPHGDFARVWLHNEMLQVEGRKMSKSLGNFFTVRDLLD------Q 296
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PAVLSALYN 357
P VIR +L THYR+P+D+T ++ EAE +L +W PAV++AL +
Sbjct: 297 GIPGEVIRFVLLSTHYRKPMDWTAEKAREAEAVLRRWRGLVAGVEPAPGPAPAVVAALAD 356
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE----HLNKNISIAIEKLV 413
DLNT AI ALH++A + A A +LG+ ++S E++
Sbjct: 357 DLNTAGAIAALHEMAGQGDGPG-----LLAGARMLGLLTEDLGGWIAEGPDLSALTERMA 411
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
R K FS+ D ++++L G +
Sbjct: 412 ALRADAKASKDFSAVDALKQRLLDAGVEVRMSAAGVELLPG 452
>gi|55980862|ref|YP_144159.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
gi|61216139|sp|Q5SJV9|SYC_THET8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|55772275|dbj|BAD70716.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB8]
Length = 480
Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 162/493 (32%), Positives = 241/493 (48%), Gaps = 61/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+TL R+ F+ P ++ +YVCGPTVY H+G+AR +V+DVL R L +
Sbjct: 1 MGLVIYDTLARRKVPFEPAVPGHVGIYVCGPTVYADPHLGHARGPVVYDVLRRYLLHKGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI+ RA+ E + K T +
Sbjct: 61 --KVRFVSNITDVGHLTDDADEGEDKIVRRAKLERLE------PMEVAEKYTWSYFDAMQ 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P+ PRA+ HIP+M+ L + ++ G AYE + F S P YG S ++++E
Sbjct: 113 ALNVLRPSIAPRASGHIPEMLELTERLLARGVAYERKGSVYFRVRSFPEYGKLSGKRLEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ G RV + K++P DF LWK + P W+SPWG G PGWHIEC+AMS YLG+ F
Sbjct: 173 LRAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
D+H GG+DL FPHHE EIAQ+ A + A W+H+ + LEG KM+KS GN + +++L
Sbjct: 233 DLHAGGIDLQFPHHECEIAQAEAAG--FRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------- 343
LE + +R +L THYR P+DFT + L A+ +
Sbjct: 291 LEAHE-------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTA 343
Query: 344 -----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNA 387
++ A + A+ +DL+T A+ AL E K + L A
Sbjct: 344 PPGTTPELERALDALEKAFMEAIEDDLSTPEALAALFAFLPELHKLLPEAKAESLARAEA 403
Query: 388 SAHILGIEVCKEHLNKNISIAIE---------KLVQERLILLKMKKFSSADYIRKQLESK 438
H LG + + + + L++ R + K + +D IR++L +
Sbjct: 404 VFHTLGEGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERLRAL 463
Query: 439 GFILEDYKNPDNG 451
G I+ED K
Sbjct: 464 GVIVEDTKEGPRW 476
>gi|187631656|sp|A2C808|SYC_PROM3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 499
Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 171/516 (33%), Positives = 237/516 (45%), Gaps = 81/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + ++ +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TDIDDKI++RA ++ S+ I+ +N + F +D L L P
Sbjct: 61 --SVTFVQNFTDIDDKILKRAAEKKCSMEH------ISEQNIEAFHQDMDALGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
PRAT + + LI + G AY + ++ F YG S R ++EQ+
Sbjct: 113 PRATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++ DF LWK + EP + SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 DAEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A ++ A W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 233 DLIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
+RL +L HYR+P+DFT + A
Sbjct: 288 --GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEALNWPECKP 345
Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
T I + AL +DLN+ AI L LAR + L
Sbjct: 346 LPQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLERGDT 405
Query: 384 ----------------IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLK 421
+ A++LG+E K E N+ I+ + R
Sbjct: 406 KAIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKEAKA 465
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ F+ AD IR +L ++G L D T W
Sbjct: 466 ARDFAKADRIRDELRAQGIELIDKPGGL-----TDW 496
>gi|225873812|ref|YP_002755271.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
gi|225791240|gb|ACO31330.1| cysteine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
Length = 491
Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 169/512 (33%), Positives = 230/512 (44%), Gaps = 76/512 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+++NTL +I D RMY CGPTVYD+ HIGN R DVL R L+
Sbjct: 1 MIRLFNTLSGQIEALTPADGQTFRMYACGPTVYDYGHIGNFRTFCHVDVLRRALQLEG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N+TD+DDKII A + I+ T K Q F +D L P
Sbjct: 59 ITVRHVMNVTDVDDKIIRNATRAGV------PIAEYTKKYEQAFFEDLHALGVAEPEVIA 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT HIP M+ LI+ + AY+ + F + +YG S++ + G RV
Sbjct: 113 RATEHIPAMVKLIEQLAAQDIAYKTEDGSWYFRIARFKDYGKLSKKDLTGISDGARVDVD 172
Query: 183 YHKKNP-ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++K+ DF LWK P E WE+P G GRPGWHIECSAM+ YLG+ D+HGGG DL+
Sbjct: 173 EYEKDSARDFALWKSPKPGEHFWETPLGAGRPGWHIECSAMAMEYLGESIDLHGGGEDLM 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS CA + A W H FL +EGRKMSKS GNF T+ +LL +
Sbjct: 233 FPHHENEIAQSECASH-KTFARHWFHVRFLLVEGRKMSKSEGNFYTLRDLL------LKG 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------K 344
+ A IR+ ++ YR+ ++FT + L + +
Sbjct: 286 YKASAIRMLLISVPYRQQLNFTFEGLAAETTAVERLRTFYQRMLTVTPATEKNAALSTET 345
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILG 393
+ L NDLNT A A+ L R D +L + +
Sbjct: 346 EKARKEFRAGLENDLNTAEARAAIFDLVRAGNAAADAGTLSTENVAEILAVLREFDSVFN 405
Query: 394 IEVCKEHL-------------------------NKNISIAIEKLVQERLILLKMKKFSSA 428
+ ++ I+ LV ER + + F+ A
Sbjct: 406 VLEDRDAAITKFALEWAEQEGRLNEAAHEVLAQRGLSDEQIQALVDERTKAKRARNFARA 465
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
D IR +L KG ++ED K RWK+K
Sbjct: 466 DQIRNELAEKGIVIEDSK------EGVRWKRK 491
>gi|162147983|ref|YP_001602444.1| cysteinyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786560|emb|CAP56142.1| putative cysteinyl-tRNA synthetase [Gluconacetobacter
diazotrophicus PAl 5]
Length = 711
Score = 335 bits (858), Expect = 1e-89, Method: Composition-based stats.
Identities = 185/435 (42%), Positives = 251/435 (57%), Gaps = 26/435 (5%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ ++++ RK F +DP N+R+Y CGPTVYD AHIGN R M+ D+L RLLR+ Y
Sbjct: 5 MPQLTLHDSRSRKTVPFAPLDPGNVRVYYCGPTVYDLAHIGNLRAMVTADILVRLLRHLY 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYVRNITD+DDKI RAR + I +T++ + F +D + L P
Sbjct: 65 --PRVTYVRNITDVDDKINTRARANG------ETIDSLTARTIRDFHEDLDAVGILPPDI 116
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+PRAT+HI +M+ LI +I GHAYEA ++F S P YG+ S R ++ G RV
Sbjct: 117 EPRATHHIAEMLTLIGQLIDSGHAYEAQGHVLFAVSRFPAYGALSGRSPEDLLAGARVEV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K++P DF+LWK S P PGWESPWGRGRPGWHIECSAMS YLG+ FDIHGGG DL+
Sbjct: 177 APYKRDPGDFVLWKPSAPDLPGWESPWGRGRPGWHIECSAMSHRYLGESFDIHGGGSDLL 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C + AN W+HN L + G KMSKS GNF+T+ + L
Sbjct: 237 FPHHENELAQSQCCFPHGRFANHWVHNAMLLVNGEKMSKSLGNFLTVRDALSVS------ 290
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALY 356
PA +RL +L YR ++FT+ L +A+ L+++ + + VL+AL
Sbjct: 291 -PAEALRLLLLHAQYRSVLNFTLAGLEDAKQTLNRFYRAVGDTPPDGTVPVPAPVLAALC 349
Query: 357 NDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCKEHLNKNI-----SIAIE 410
+DLNT A+ +H LA R + D A+ +LG+ E IE
Sbjct: 350 DDLNTPRALAEMHALADRALAGDRDAALGLRAAGQLLGLLGQTEDAWFRAGTYVHPETIE 409
Query: 411 KLVQERLILLKMKKF 425
+L+ ER K + F
Sbjct: 410 RLIVERQDARKSRDF 424
>gi|124022576|ref|YP_001016883.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123962862|gb|ABM77618.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 511
Score = 334 bits (857), Expect = 1e-89, Method: Composition-based stats.
Identities = 171/515 (33%), Positives = 237/515 (46%), Gaps = 81/515 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ NTL R+ F + ++ +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 14 SLRLTNTLTRRTEPFTPLKDGHVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY- 72
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N TDIDDKI++RA ++ S+ I+ +N + F +D L L P P
Sbjct: 73 -SVTFVQNFTDIDDKILKRAAEKKCSMEH------ISEQNIEAFHQDMDALGILRPDRMP 125
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
RAT + + LI + G AY + ++ F YG S R ++EQ+
Sbjct: 126 RATQCLDGIRALIGELETSGAAYSVDGDVYFAVMKHHGYGKLSGRDLNEQQQNADGRVAD 185
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK + EP + SPWG GRPGWHIECSAM LG+ DIH GG D
Sbjct: 186 AEEARKQHSFDFALWKGAKTGEPSFPSPWGAGRPGWHIECSAMVREELGETIDIHLGGAD 245
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A ++ A W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 246 LIFPHHENEIAQSEAATG-KQLARYWLHNGMVNVGGQKMSKSLGNFTTIRALLES----- 299
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
+RL +L HYR+P+DFT + A
Sbjct: 300 -GVSPMTLRLFILQAHYRKPLDFTADAINAAATGWKGLNAALGLGNIYAEALNWPECKPL 358
Query: 338 ---------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----- 383
T I + AL +DLN+ AI L LAR + L
Sbjct: 359 PQEVMQPAHSSTLEQCSEIRQHFIDALDDDLNSSGAIAVLFDLARPLRALANRLERGDTK 418
Query: 384 ---------------IFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKM 422
+ A++LG+E K E N+ I+ + R
Sbjct: 419 AIQETAQLNLLPRWQLLVELANVLGLEAEKAAKLAPEGNNRVDENHIQLAIAARKEAKAA 478
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ F+ AD IR +L ++G L D T W
Sbjct: 479 RDFAKADRIRDELRAQGIELIDKPGGL-----TDW 508
>gi|11467971|sp|O84787|SYC_CHLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 477
Score = 334 bits (857), Expect = 2e-89, Method: Composition-based stats.
Identities = 158/495 (31%), Positives = 238/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 1 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 60 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 112 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 171
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 172 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 231
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 232 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 287 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 344
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 345 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 404
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 405 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 461
Query: 439 GFILEDYKNPDNGQR 453
F +ED K ++
Sbjct: 462 SFAIEDGKTGMKVKK 476
>gi|310815554|ref|YP_003963518.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
gi|308754289|gb|ADO42218.1| cysteinyl-tRNA synthetase [Ketogulonicigenium vulgare Y25]
Length = 453
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 195/474 (41%), Positives = 260/474 (54%), Gaps = 56/474 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I ++NT R+ F ++P+N+R+Y+CGPTVYD AH+GNARP++VFDVL RLLR+ YG
Sbjct: 3 QITLHNTKTRQTEVFVPLNPANVRLYLCGPTVYDRAHLGNARPVLVFDVLVRLLRHVYGA 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTY RN TD+DDKI +RA S I IT + + D L P +P
Sbjct: 63 DAVTYARNFTDVDDKINDRAAATGRS------IRDITDETIGWYHADMDALGADRPDLEP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+ IP M+ +I +I GHAY ++F S +YG+ S R +++ G RV
Sbjct: 117 RATDWIPAMVEMITGLIDRGHAYATEGHVLFAVDSYADYGALSGRSVEDMIAGARVEVAP 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF+LWK S +PGW+SPWG GRPGWHIECSAMS LG FDIHGGG+DL FP
Sbjct: 177 FKRNPMDFVLWKPSDTDQPGWDSPWGHGRPGWHIECSAMSYGLLGASFDIHGGGIDLQFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSCCA A WIHN L +EGRKMSKS GNF T+ +LL+ + P
Sbjct: 237 HHENEIAQSCCAHPEASFARYWIHNEMLQVEGRKMSKSLGNFFTVRDLLD------QGVP 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRL--TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
VIRL ML THY P+D+T + E + + + G IDP V++AL ++LNT
Sbjct: 291 GEVIRLVMLGTHYSRPMDWTEDKRLTAEGALRKWRALTAGAAPGAIDPEVITALADNLNT 350
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK----EHLNKNISIAIEKLV---- 413
AI ALH+LA ASA +LG+ + + + ++ L+
Sbjct: 351 AGAISALHRLANAGDAGG-----LLASAQMLGLLQDGMGDWLAASGDDAALVDGLLADRA 405
Query: 414 ----------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ IR +L + G +L+D +T W
Sbjct: 406 AAKAARDFAAAD--------------AIRDRLVAAGVVLKDKPGG-----VTEW 440
>gi|302671187|ref|YP_003831147.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
gi|302395660|gb|ADL34565.1| cysteinyl-tRNA synthetase CysS [Butyrivibrio proteoclasticus B316]
Length = 474
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 163/487 (33%), Positives = 236/487 (48%), Gaps = 50/487 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K YNTL RKI EF + + MY CGPTVY FAHIGN R I+ DVL + L Y
Sbjct: 1 MSHKFTFYNTLSRKIEEFNPREEGKVSMYTCGPTVYHFAHIGNIRTYIMQDVLIKALGYA 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK++ A++EH ++ I T F KD
Sbjct: 61 GYD--VKRVMNITDVGHLSSDADTGEDKMLAGAKREHKTV------MEIAKFYTDAFFKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ P ATN IP+ I++++ ++ G+AY A + FDTS + +Y FS
Sbjct: 113 FDAVGNKRPDVVEPATNCIPEFIHMVEVLLEKGYAYVAGGNVYFDTSKLQDYYVFSSEVE 172
Query: 171 DEQKM---GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
EQ V E +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KEQLQVGVRDDVEEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG+ DIH GG+D IFPHH NEIAQS E W H+ LN + KMSKS G
Sbjct: 233 KHLGEYIDIHCGGVDNIFPHHTNEIAQSESYLGHE-WCKYWFHSNHLNDKSGKMSKSKGA 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
+T++ L E + + V R L +HYR+P++F+ + L +A +K
Sbjct: 292 VLTVSVLQE------KGYDPLVYRFFCLQSHYRKPLEFSYEALDQAAQAFNKLVKRVSEL 345
Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
+ +K + A+ NDLNT AI L+ + + + L + + +L
Sbjct: 346 KEDGAVDTAAKEKFEENFRDAVSNDLNTSMAITVLYDVLKADINDATKLALVESFDKVLS 405
Query: 394 IEVC--------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+++ ++ + I ++ R K K F++AD IR +L KG ++D
Sbjct: 406 LDLLGHAKAVSEGPSVDPELEKFILDAIERRANAKKAKDFATADAIRAELLEKGVEIKDT 465
Query: 446 KNPDNGQ 452
+ Q
Sbjct: 466 REGVKWQ 472
>gi|73669162|ref|YP_305177.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
gi|109894908|sp|Q46BZ5|SYC_METBF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|6599478|gb|AAF18751.1|AF164201_1 cysteinyl-tRNA synthetase [Methanosarcina barkeri]
gi|72396324|gb|AAZ70597.1| cysteinyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
Length = 471
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 163/488 (33%), Positives = 234/488 (47%), Gaps = 55/488 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL RK F+ + + +Y CGPTVY+ HIGN R ++ D + R L Y
Sbjct: 1 MLQVYNTLTRKKEVFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLMADNIVRSLEYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDK I ++ S+ T K T +F K L + P
Sbjct: 60 -KVKLVMNITDIDDKTIRDSKAAGMSL------KDFTDKYTAEFFKGLDMLNIKRASAYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I MI L Q +I G AYE + + SS P+YG S+ D +G V
Sbjct: 113 RATENIDSMIELTQKLIDKGMAYEKGGSVYYRISSFPDYGKLSKLDFDSIIIGASVDVDE 172
Query: 184 HK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ NP DF L K STP E +ESPWG+ RPGWHIECS M+ + G D+H GG+
Sbjct: 173 YDKDNPRDFALLKTSTPEEIERGIYYESPWGKIRPGWHIECSVMAMNCFGPTLDMHLGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A + A WIH L +EG KMSKS GN T+ E++
Sbjct: 233 DLIFPHHENEIAQSEGATG-KPFACYWIHGEHLIVEGEKMSKSKGNVFTLPEIVG----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R L HYR+ +D++ A+ + +T +
Sbjct: 287 --KYGGEVVRFMFLSVHYRKKLDYSDAFAENAKNNYLRLKETLENLEFSLESAENTDYPG 344
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
++ AL +D N A+ +L+R + K + L ++
Sbjct: 345 DEEVLKILPELETQFREALEDDFNIPKALTVFKELSRTANKYLESEKNRHVLEKLYSLYR 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ LG+ E K I + +LV+ER K K ++ +D IR++++S G+I++D K
Sbjct: 405 QFSDTLGL--FSESGKKEIPTEVMRLVEEREAARKKKDWTVSDAIREKIKSLGYIVQDTK 462
Query: 447 NPDNGQRM 454
N +
Sbjct: 463 EGPNVKET 470
>gi|182414301|ref|YP_001819367.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
gi|254781688|sp|B1ZSX8|SYC_OPITP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|177841515|gb|ACB75767.1| cysteinyl-tRNA synthetase [Opitutus terrae PB90-1]
Length = 457
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 163/467 (34%), Positives = 256/467 (54%), Gaps = 31/467 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K++++L R + E Q P + R Y CGPTVY AHIGN R +V D+L R+L +
Sbjct: 1 MALKLFDSLTRNLRELQPSHPDGVFRFYNCGPTVYAPAHIGNFRTFVVNDILRRMLELEF 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G V +VRN+TD+DDK I+RAR E ++ +T + T +F D L CL P
Sbjct: 61 GAPKVKHVRNLTDVDDKTIKRARDEG------RPLADVTRQWTDKFHADCAALNCLPPHI 114
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM----- 175
+P AT HI + + +I ++ G+AY A+ + F SS +YG SR K E ++
Sbjct: 115 EPTATGHIREQVDMIDCLMQKGNAYRAADGSVYFKVSSFSDYGRLSRVKERELQIGSALA 174
Query: 176 -GTRVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
++ + K++ +DF LWK P E W+SPWGRGRPGWHIECSAMS +LG+ D
Sbjct: 175 GKSQAVDADEKEDGSDFALWKAHKPDDGENSWDSPWGRGRPGWHIECSAMSKKHLGETID 234
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
+H GG+DL+FPHHENEIAQS C + ++ + W H+ L ++G+KMSKS GN T+++L
Sbjct: 235 LHTGGVDLLFPHHENEIAQSECCNGVQ-FSRHWYHSEHLLVDGKKMSKSLGNLYTLDDL- 292
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ 346
+ + +R A+L H R+ ++FT+ L AE L+ +
Sbjct: 293 -----KQKGFSPMAVRYALLSGHPRKQLNFTLDSLHAAEKALATLRAYRATLAAGGAAHH 347
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL-NKNI 405
+ V++AL +DLNT +A+ AL + D+ F+ LG+++ +
Sbjct: 348 VFAPVIAALEDDLNTPAALGALFTIVNRGKGEADV-ESFDRVMFALGLKLDAPTAPKAEV 406
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ L ++R + K F++AD +RK++ + G+ + D K+ + +
Sbjct: 407 PAEVTALAEKRWAAKQAKDFATADALRKEIAAAGWSMLDRKDGYSLE 453
>gi|171184546|ref|YP_001793465.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
gi|229558796|sp|B1YA45|SYC_THENV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|170933758|gb|ACB39019.1| cysteinyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
Length = 474
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 167/473 (35%), Positives = 241/473 (50%), Gaps = 44/473 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT R++ EF P R YVCG T YD H+G+ R + FD+ R L E
Sbjct: 1 MRIYNTATRQVEEFTTYVPRLARGYVCGITPYDHMHVGHGRVYVFFDIFRRYLERLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKI+ +AR+E + + ++ + T RL P+
Sbjct: 60 -VRLVINFTDIDDKIVNKAREEF-GHEAYKRWREVPERYIAEYFEMTRRLYIKPAYAYPK 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I ++ G+AY + + F+ + +PNYG SR+KI+E G RV +
Sbjct: 118 VTENVEDMVKWISTLVEKGYAYVAPDGSVYFEVAKVPNYGVLSRQKIEELIAGARVEPEP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK TP EP W SPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWTPGEPWWNSPWCPGRPGWHLECVVMSTKHLGAPFDFHGGGADLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L
Sbjct: 238 HHENEIAIARAYFGVDNFARYWIHVGYLTVRGEKMSKSLGNIITLREVLS-------KHS 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------TSKGIIDPAVLSAL- 355
+RLA M+HYR+P++FT + L +AE + G D ++
Sbjct: 291 GEALRLAYAMSHYRKPMEFTYELLQQAEDMAKTLYTAYDELSQALRDAGEKDQEPIAQEA 350
Query: 356 -----------YNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFNA---SAHI 391
+D++T A+Q L+ +AR E L + N A +
Sbjct: 351 LKYAGAFYGALDDDMSTPEAVQQLYGMARYIISTVLHRVEKISRETALAVLNKYVEMADV 410
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ + + + K + A++ LV+ R L + +++ ADYIR++L G L D
Sbjct: 411 LGV-LERRQIPKELEEAVKALVETRARLRQERQYQLADYIRQRLAELGVELHD 462
>gi|163839174|ref|YP_001623579.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|189082074|sp|A9WLY4|SYC_RENSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|162952650|gb|ABY22165.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 493
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 160/503 (31%), Positives = 223/503 (44%), Gaps = 72/503 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T ++ +F + +Y CG TV HIG+ R +VFD L R L++
Sbjct: 1 MTLRFYDTATAEVRDFAPLVEGKASLYYCGATVQSEPHIGHLRSALVFDQLTRWLQFRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V VRN+TDIDDKI+ +A + + K QQF +L P ++
Sbjct: 61 QTTV--VRNVTDIDDKILAKAAEAG------EEWWARAYKYEQQFNAAYDKLGITRPDYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT +I +M LIQ++I GHAY A ++ FD S YGS + + ID+ +
Sbjct: 113 PRATGNISEMHSLIQDLIDRGHAYPAPDGSGDVYFDVRSWGKYGSLTHQNIDDMQAAADA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ KK+ DF LWK P EP W SPWG GRPGWH+ECSAM YLG FDIHGG
Sbjct: 173 DPR-GKKDARDFALWKGRKPEEPTTASWPSPWGAGRPGWHLECSAMVGKYLGDAFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A AN W+HNG + +G KMSKS GN I EL
Sbjct: 232 GLDLRFPHHENEMAQSQAAG--RPFANFWMHNGLVAYQGEKMSKSIGNVIGPGELFAQA- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------ 338
V+R + HYR +D++ + L EA L++
Sbjct: 289 ------SPRVVRYYLGQAHYRSVLDYSPESLEEAAAALARIDGFLVNAGANVQRVEVEDS 342
Query: 339 ---------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----- 378
A + A+ +DLN A+ LH+ R
Sbjct: 343 GHMYLPPAAKQGFGWFAYAPLSDTPAAFVEAMDDDLNVPKALAVLHETVRAGNSAIASSD 402
Query: 379 ----HDLLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
A +LG+ + + ++ +QER K ++ +
Sbjct: 403 LVELQKKFEAVLAMLDVLGLSSIATDQAADNGSTHALETLVQTRLQERQQARTEKNWARS 462
Query: 429 DYIRKQLESKGFILEDYKNPDNG 451
D IR +L G +ED N
Sbjct: 463 DEIRDELAEAGIKIEDSSNGATW 485
>gi|238061386|ref|ZP_04606095.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
gi|237883197|gb|EEP72025.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
Length = 471
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 159/485 (32%), Positives = 225/485 (46%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + +Y+CG T+ HIG+ R + +DVL R L
Sbjct: 1 MTLRLYDTATRSVRDFVPREAGKAGVYLCGLTLQGPPHIGHLRSGVNYDVLRRWLLARGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++RN+TDIDDKI+ +A ++ I N + L L PT++
Sbjct: 61 E--VRFIRNLTDIDDKILVKAVEQG------RPFWSIAYANERALAAAYGMLNVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+M LI +I GHAY A + ++ FD +S P YG+ S + D +
Sbjct: 113 PRATGHIPEMHELIARLIDTGHAYPATDGSGDVYFDVASWPAYGALSGQSPDAMQAADDA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +P DF LWK + P EP W SPWGRGRPGWHIECSAM YLG+ FDIHGG
Sbjct: 173 -PERGKHDPRDFALWKGAKPNEPADAYWPSPWGRGRPGWHIECSAMCWRYLGEEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENEIAQS A A W+H+G L + G KM KS GN L+
Sbjct: 232 GLDLTFPHHENEIAQSQAAG--LPFARYWVHHGLLGIGGAKMGKSLGN------ALDLTY 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GII 347
+R HYR +D+T L E + G +
Sbjct: 284 IDSLGVRPIELRYYYAAAHYRSHVDYTEDSLREWASGFRRIEGFVQRAAERVGPGELGEL 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
++A+ +DLNT +A+ L ++ R+ L A ILGI+
Sbjct: 344 SAGFVAAMDDDLNTSAALAVLQEVLRDGNTALAAGDDVTVRTALGSTRAMLDILGIDPLD 403
Query: 399 EHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
E + + +++R K + +AD +R QL+ G ++ED
Sbjct: 404 EAWTGGGRADDLRGVVDSLVALALEQRAQARSRKDWVAADAVRDQLKLAGVVVEDTPQGP 463
Query: 450 NGQRM 454
Sbjct: 464 RWTIG 468
>gi|15605515|ref|NP_220301.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis D/UW-3/CX]
gi|255311617|ref|ZP_05354187.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276]
gi|255317918|ref|ZP_05359164.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis 6276s]
gi|3329246|gb|AAC68377.1| Cysteinyl tRNA Synthetase [Chlamydia trachomatis D/UW-3/CX]
gi|296437262|gb|ADH19432.1| cysteinyl-tRNA synthetase [Chlamydia trachomatis G/11222]
Length = 497
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 158/495 (31%), Positives = 238/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 21 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 79
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 80 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 131
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 132 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 191
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 192 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 251
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 252 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 306
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 307 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 364
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 365 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 424
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 425 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 481
Query: 439 GFILEDYKNPDNGQR 453
F +ED K ++
Sbjct: 482 SFAIEDGKTGMKVKK 496
>gi|297748910|gb|ADI51456.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-EC]
gi|297749790|gb|ADI52468.1| Cysteinyl-tRNA synthetase [Chlamydia trachomatis D-LC]
Length = 500
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 158/495 (31%), Positives = 238/495 (48%), Gaps = 63/495 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F ++ +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 24 MDLFLYNTLSREKERFLPVNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRVLLFLGY 82
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITD+DDK + AR++ S+ F D L L
Sbjct: 83 --SVYHVMNITDVDDKTLAGARKKGCSLEK------YCQPYIHAFFADLETLHILKADAY 134
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P AT++IPQMI IQ +I G AY ++ + F S PNYG+ S ++E + R+
Sbjct: 135 PHATHYIPQMIEAIQQLINQGVAYIGQDQSVYFSISQFPNYGALSHLNLEELRNSARIDA 194
Query: 182 KYHKKNP-ADFILWKRSTPM---EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+ DF+LWK P E WESP+G+GRPGWH+ECS MS LG+ DIH GG
Sbjct: 195 DEYDKDNLCDFVLWKAYDPDRDGEIFWESPFGKGRPGWHLECSIMSISLLGQSLDIHAGG 254
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D IFPHHENEIAQS + W+H+ L ++ +KMSKS GNF T+ +LL+
Sbjct: 255 VDNIFPHHENEIAQSESLSH-KPFVRYWLHSHHLLVDRKKMSKSLGNFFTLRDLLD---- 309
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L HYR ++FT + L + L +
Sbjct: 310 --QGFSGEEVRYLLLQGHYRTQLNFTQEGLHASRQSLKRLRDFICRLEDPSYPDDIIHPE 367
Query: 349 ---------PAVLSALYNDLNTVSAIQALHKLARESTKNHD------------------- 380
+++L NDLN S++ AL R+ + D
Sbjct: 368 VATACQSFLETFITSLTNDLNISSSLAALFDFIRKINSSIDQHTGIQTETDSSVFSKQDA 427
Query: 381 --LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+L + +LG+ + +I + LV++R K+K + AD +R ++ S+
Sbjct: 428 QHILALLRKIDQVLGVLPFSQP---DIPEEVLLLVEQREAARKVKNWQEADRLRDEILSR 484
Query: 439 GFILEDYKNPDNGQR 453
F +ED K ++
Sbjct: 485 SFAIEDGKTGMKVKK 499
>gi|124026295|ref|YP_001015411.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|171769740|sp|A2C3T6|SYC_PROM1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123961363|gb|ABM76146.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 500
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 178/516 (34%), Positives = 249/516 (48%), Gaps = 80/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K NTL +K +F +I+P+ +++Y CG TVYD H+G+AR + +DVL R L +
Sbjct: 1 MSLKFTNTLSKKKEDFISINPNQVKIYCCGVTVYDLCHLGHARSYLNWDVLRRFLIWKGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V+N TDIDDKII RA +E S ++ +N +F KD L+ L PT
Sbjct: 61 E--VKFVQNFTDIDDKIINRANKEGCST------DELSERNIDEFHKDMDTLSILRPTSM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT----R 178
PRAT + Q+I I+ + AY +N ++ F + NYG S R+I+ Q +
Sbjct: 113 PRATKCLHQIINFIEELEQKKVAYSSNGDVYFSVNKHKNYGKLSGREIENQIDNAAGRLK 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+K KKN DF LWK+S E + SPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 TNQKESKKNSLDFALWKKSNSGEVSYSSPWGNGRPGWHIECSAMVKQELGESIDIHLGGS 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS + E A W+HNG +N+ G KMSKS GNF TI LLE
Sbjct: 233 DLIFPHHENEIAQSEACNGKE-LAKYWLHNGMVNVGGEKMSKSLGNFTTIRSLLE----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
+R +L T+YR+P+DFT + L A + + I
Sbjct: 287 -EGISPMTLRFFVLQTNYRKPLDFTQEALKAASKGWERLNNCLSFGYIYKIKDQAKNEII 345
Query: 349 ---------------------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----- 382
+ +DLNT A+ L +L++ K + L
Sbjct: 346 LDKPIKKSANTNLDKESFKLLSDFERYMDDDLNTSGALSILFELSQPIRKIINFLKEKDI 405
Query: 383 ---------------PIFNASAHILGIEVCKEHLN-----KNISIAIEKLVQERLILLKM 422
+ + A +LG++V H N + + IE+L+++R +
Sbjct: 406 NEVDQDELNQVFYKWELLSELAAVLGLKVNLNHENPKNNPELDTNKIEELIKKRSLAKAN 465
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K F AD IR ++ G L D +T WK
Sbjct: 466 KDFLLADKIRDDFKNIGIDLIDKPKG-----VTEWK 496
>gi|254822713|ref|ZP_05227714.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 469
Score = 334 bits (856), Expect = 2e-89, Method: Composition-based stats.
Identities = 153/475 (32%), Positives = 223/475 (46%), Gaps = 46/475 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + ++ +Y+CG TV HIG+ R + FD+L R L
Sbjct: 6 RLRLHDTAAGAVRDFVPLREGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLIARG-- 63
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDIDDKI+ +A + + F L L P+ +P
Sbjct: 64 CDVAFIRNVTDIDDKILNKAAAAG------RPWWEWAATYERAFSAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI L+ +I HAY A ++ FD S P YG S KID+ G
Sbjct: 118 RATGHITQMIELMHRLIETEHAYAAGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGAAT-- 175
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK + P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 176 CKRDQRDFTLWKAAKPGEPSWPTPWGRGRPGWHLECSAMARTYLGAEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN + I LL+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLAIPALLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVLSA 354
+R + HYR ++F+ L E + + G P A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSETALQDAVKAYVGVEEFLHRVRVRVGGVEPGQWTPKFADA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNI 405
L +DL +A+ +H E + D A ILG + E
Sbjct: 347 LNDDLAVPAALAEVHAARAEGNRALDSGDHDGALRHARAIRAMMGILGCDPLDERWETRD 406
Query: 406 S-----IAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
A++ L ++ R + + ++ AD IR +L+ G + D +
Sbjct: 407 ETSAALAAVDVLVHTELENREKAREQRNWALADEIRDRLKHAGIEVTDTADGPQW 461
>gi|148285058|ref|YP_001249148.1| cysteinyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
gi|166225303|sp|A5CFB8|SYC_ORITB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|146740497|emb|CAM81053.1| cysteinyl-tRNA synthetase, class Ia [Orientia tsutsugamushi str.
Boryong]
Length = 478
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 181/493 (36%), Positives = 270/493 (54%), Gaps = 53/493 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL RK F ++ +++MYVCGPTVYD HIGNAR ++V+D+LYR+L + Y
Sbjct: 1 MNLYIYNTLSRKKERFVPLNCKSVKMYVCGPTVYDIPHIGNARSVVVYDLLYRVLSFLYD 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +TYVRNITDIDDKII RA++ + I +T + T +F +D + L C PT +
Sbjct: 61 RQNITYVRNITDIDDKIINRAKE------LKINIFKLTHETTIKFHEDMSYLGCWNPTIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT++I MI +I ++I G+AY + + F + +Y SRR D + +
Sbjct: 115 PKATDNIDVMINIITSLIQTGNAYSTDDGHVYFAVKTFQDYNLLSRRTFDSMMLNSSESS 174
Query: 182 KYHKKNPADFILWKR----STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K ADF+LWK + ++ ++SPWG+GRPGWHIECSAMS +LG+ FDIHGGG
Sbjct: 175 EQQKSYFADFVLWKPANADNEDIDAVFDSPWGKGRPGWHIECSAMSYKFLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA + A+ W+HNGFL ++G KMSKS NF+T+ +L
Sbjct: 235 ADLIFPHHTNEIAQSRCAFPKSRHASYWVHNGFLTVKGEKMSKSLNNFVTVRDL------ 288
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TS 341
++ +RL L THYR+P+DF + L +A+ +++
Sbjct: 289 QKQNINGAAVRLMFLSTHYRKPLDFNDKSLNDAKNIINYLYDTIDSVNVTVQQQDNTKAE 348
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIE 395
++AL +DLN+ AI L +A++ + + L ++++LGI
Sbjct: 349 FKGNAFTVEFINALLDDLNSPKAIVCLLNIAKQIRRQNQSEYKLALTQALLYASNLLGIL 408
Query: 396 VCKEHLNKN---------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ + + I I+ L+ +R+ + K ++ AD IR QL S G L D
Sbjct: 409 HNYQFIKDSNDVKDNSNVIPHEIDLLIAKRIQAKQDKDWNLADQIRSQLLSNGISLTDKA 468
Query: 447 NPDNGQRMTRWKQ 459
+ T WK
Sbjct: 469 DGT-----TSWKV 476
>gi|239916923|ref|YP_002956481.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|281414621|ref|ZP_06246363.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|259511838|sp|C5C8X5|SYC_MICLC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|239838130|gb|ACS29927.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
Length = 485
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 161/490 (32%), Positives = 237/490 (48%), Gaps = 56/490 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+ Y+T +I +F+ + P +Y CG TV H+G+ R IVFD+L R L
Sbjct: 4 RFYDTRTAQIRDFEPLVPGEASVYYCGATVQGMPHVGHVRSAIVFDILIRWLEATG--LR 61
Query: 66 VTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLACLA 118
VT VRN+TDIDDKI++R+ H + P + + + + F L
Sbjct: 62 VTSVRNVTDIDDKILDRSAASHEAGFEASDLYPAREPWWALAYRFEKAFDAAYLALGVRR 121
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT H+P+M LI+ ++ GHAY A ++ FD S YG +R+++++ +
Sbjct: 122 PTYEPRATGHVPEMFALIERLMERGHAYPAQDGSGDVYFDVRSWERYGELTRQRVEDMQD 181
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK + P EP WESPWG GRPGWH+ECSAMS+ YLG FD
Sbjct: 182 APDADPR-GKRDPHDFALWKGAKPGEPATAVWESPWGAGRPGWHLECSAMSTKYLGAEFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A A W+HNG + G KMSKS GN I+ E+L
Sbjct: 241 IHGGGLDLRFPHHENELAQSAAAGDG--FARFWLHNGLVTYGGEKMSKSVGNTISPEEML 298
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
+ +R + HYR +D+ L EAE ++ + +
Sbjct: 299 GMAR-------PTAVRYFLGQAHYRSQLDYRPGALDEAEAVVERIEGFTARARAAGAVPP 351
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNAS 388
+ A +A+ +DLN A+ ALH+ R L A
Sbjct: 352 APDGALADRVPAAFRTAMEDDLNVPQALAALHEAVRAGNSALAGQDLDAAAARLAEVEAM 411
Query: 389 AHILGIEVCKEHLN-------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LG++ E + + + ++ R K +++AD IR L + G +
Sbjct: 412 TAVLGLDDVPEGDDAAAGPVSDALDSLVRSQIEARAQARADKDWATADRIRDALAAAGVV 471
Query: 442 LEDYKNPDNG 451
+ED +
Sbjct: 472 VEDGADGATW 481
>gi|189219647|ref|YP_001940288.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
gi|189186505|gb|ACD83690.1| Cysteinyl-tRNA synthetase [Methylacidiphilum infernorum V4]
Length = 469
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 163/484 (33%), Positives = 234/484 (48%), Gaps = 52/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++NTL R++ I+P + +Y CGPTVY+ AHIGN R + D+L R L +
Sbjct: 9 PPFQLFNTLSRRVEPINPINPPQVTIYACGPTVYNLAHIGNFRTFLCVDLLRRALELFGY 68
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + N TD+DDK I +R A+S T + +F KD L L P Q
Sbjct: 69 --KVVHAMNYTDVDDKTIAASRAAGV------ALSAYTQRYIDEFEKDMRSLHMLKPHFQ 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI +MI I+ ++ HAY + + F +S P YG S + D+ K+GT+V
Sbjct: 121 PRATEHIEKMIEFIRQLLEKDHAYIGVDGSVYFRINSFPEYGKLSHLEKDKLKLGTQVFS 180
Query: 182 KYH-KKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K+N DF LWK E GW SPW GRPGWHIECS MS YLG+ DIH GG+
Sbjct: 181 DEYVKENYGDFALWKARKTEDGEIGWISPWEIGRPGWHIECSTMSMCYLGEEIDIHCGGV 240
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS + W H + +EG KMSKS GN T+ +++
Sbjct: 241 DLIFPHHENEIAQSESVTG-KNFVRHWFHVSHVLVEGEKMSKSLGNIYTLRDIIN----- 294
Query: 299 GRSWPAPVIRLA-MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
+ + V+R + +HYR+ ++FT Q + + L + Q + I P
Sbjct: 295 -KGFSPRVLRYHLLTSSHYRQTLNFTWQGMESSREALKRIDQWLSRLQNIPPSQFQQQEG 353
Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-------NASAHILGI 394
+ AL +DLN A+ L + R + + D +LG+
Sbjct: 354 PEQQLFVRRFIEALADDLNITEAVGHLFEWIRLTNRLMDKGEALPQIDKAWQLVDAVLGV 413
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
LN + I+ L+ R K K + +D IR++L+ G+I++D
Sbjct: 414 G----ELNVQVPPEIQSLLAIRAEARKHKDWQKSDNIRQKLQEMGWIVQDTPEGQKV--- 466
Query: 455 TRWK 458
WK
Sbjct: 467 --WK 468
>gi|312964405|ref|ZP_07778699.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
gi|110614083|gb|ABF02750.1| cysteine tRNA synthetase [Shigella flexneri 5 str. 8401]
gi|312290882|gb|EFR18758.1| cysteinyl-tRNA synthetase [Escherichia coli 2362-75]
gi|320196999|gb|EFW71618.1| Cysteinyl-tRNA synthetase [Escherichia coli WV_060327]
Length = 437
Score = 333 bits (855), Expect = 2e-89, Method: Composition-based stats.
Identities = 166/470 (35%), Positives = 237/470 (50%), Gaps = 70/470 (14%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD HIG+ R + FDV+ R LR+ + YVRNITDIDDKII+RA +
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY--KLKYVRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++ + + + KD L L P +PRAT+HI ++I L + +I GHAY
Sbjct: 59 ------ESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++FD + P YG SR+ +D+ + G RV K+NP DF+LWK S EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQS CA + N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQ-YVNYWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G + ++ KMSKS GNF T+ ++L + + A +R ++ HYR ++++ +
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284
Query: 327 LTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
L +A L + + + A+ +D NT A L +ARE
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344
Query: 377 -KNHDLLPI------FNASAHILGIEVCKEH--------LNKNISIAIEKLVQERLILL- 420
K D+ + +LG+ + + + IE L+Q+RL
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404
Query: 421 ----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +L G +LED G + T W++K
Sbjct: 405 AKDWAAADAARD-----------RLNEMGIVLED------GPQGTTWRRK 437
>gi|332094204|gb|EGI99255.1| cysteinyl-tRNA synthetase [Shigella boydii 5216-82]
Length = 437
Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats.
Identities = 166/470 (35%), Positives = 237/470 (50%), Gaps = 70/470 (14%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD HIG+ R + FDV+ R LR+ + YVRNITDIDDKII+RA +
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY--KLKYVRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++ + + + KD L L P +PRAT+HI ++I L + +I GHAY
Sbjct: 59 ------ESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHIEEIIELTEQLIAKGHAYV 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++FD + P YG SR+ +D+ + G RV K+NP DF+LWK S EP W S
Sbjct: 113 ADNGDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQS CA + N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQ-YVNYWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G + ++ KMSKS GNF T+ ++L + + A +R ++ HYR ++++ +
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284
Query: 327 LTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
L +A L + + + A+ +D NT A L +ARE
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344
Query: 377 -KNHDLLPI------FNASAHILGIEVCKEH--------LNKNISIAIEKLVQERLILL- 420
K D+ + +LG+ + + + IE L+Q+RL
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404
Query: 421 ----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +L G +LED G + T W++K
Sbjct: 405 AKDWAAADAARD-----------RLNEMGIVLED------GPQGTTWRRK 437
>gi|123966538|ref|YP_001011619.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
gi|187629848|sp|A2BXK1|SYC_PROM5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|123200904|gb|ABM72512.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9515]
Length = 492
Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats.
Identities = 172/512 (33%), Positives = 251/512 (49%), Gaps = 77/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL + + F+ ID +++Y CG TVYD H+G+AR I +DVL R L Y +
Sbjct: 1 MIKLFNTLSKNVEVFKPIDE-EVKIYCCGVTVYDLCHLGHARSYIAWDVLRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDKI++RA++E N ++ ++ KN +F KD L + P P
Sbjct: 58 YKVKFVQNFTDIDDKILKRAKEE------NSSMKQVSEKNIAEFHKDMDALGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ATNHI + I+ + G AY ++ + +YG S + I EQ + +
Sbjct: 112 KATNHICNICSFIKVLEKKGFAYARGGDVYYSVFKNKDYGKLSNQNILEQNINQQGRMTS 171
Query: 184 HKKNPAD----FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ N + F LWK++ EP ++SPWG+GRPGWHIECSAM LG+ DIH GG D
Sbjct: 172 DESNKKNNPQDFALWKKAKENEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGAD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI +LL++
Sbjct: 232 LIFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLDS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---- 355
+R +L +YR+P+DFT + L A + I LS
Sbjct: 286 -GTSPMTLRYFVLTVNYRKPLDFTDEALKSASEAWKTINVALSFFDITKKENLSIEVNET 344
Query: 356 ---------------------------YNDLNTVSAIQALHKLAR--------------- 373
NDLNT AI +++LA+
Sbjct: 345 NEFVEEKYKEKINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRIKNL 404
Query: 374 ESTKNH-----DLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLILLKMKKFSS 427
+ N + L +LG++ + + I+ I L+ +RLI K + ++
Sbjct: 405 DINTNEKFHLRETLKTLEELTQVLGLKKEEIIIENKITEEQIISLINKRLIAKKGRDYAE 464
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AD IR L+ KG L D +T W +
Sbjct: 465 ADKIRNSLKEKGIELID-----QSTELTTWVR 491
>gi|315426666|dbj|BAJ48292.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 475
Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats.
Identities = 166/486 (34%), Positives = 244/486 (50%), Gaps = 55/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKI+NT R + F+ P ++ MYVCGPTVYD AH+G+AR + FD + R L +
Sbjct: 1 MIKIFNTYSRSLEVFEPHLPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFMGY- 59
Query: 64 KCVTYVRNITDI-------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V Y RN+TD+ +D++I A + + + K +F +D L
Sbjct: 60 -RVKYARNVTDVGHLRETGEDRMIVGAER------LRKHPMEVADKYMMEFFRDMDALGI 112
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
P QPRA+ HIP++I ++ ++ G+ Y + + FD S P+YG S K +E M
Sbjct: 113 RRPDIQPRASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELLMH 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
R+ KK+PADF LWK S P P W++PWGRG PGWHIECS MS YLG+ DIHG
Sbjct: 173 -RIDPDPRKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDIHG 231
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG +LIFPHHENEIAQS + W+H G L + GR M KS GNFITI + L
Sbjct: 232 GGQELIFPHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDAL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+++P+ V+RL +L HYR P+D++ + + +A K + +I
Sbjct: 289 ----KTYPSDVLRLFILSAHYRTPLDYSEKAMEQAAENFDKITNFYENLSLIAEEDRDKP 344
Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFN 386
+ + A+ D NT +A+ ++ ++ D L +F
Sbjct: 345 RDPSLDELGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIGHEQAAHLRQLFL 404
Query: 387 ASAHILGIEVCKEHLNKNIS--IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ +LG+ E + ++ LV+ R L K + AD IR L +G ++ED
Sbjct: 405 ETCRVLGLLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIVVED 464
Query: 445 YKNPDN 450
K +
Sbjct: 465 TKEGER 470
>gi|242310378|ref|ZP_04809533.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
gi|239522776|gb|EEQ62642.1| cysteinyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
Length = 467
Score = 333 bits (855), Expect = 3e-89, Method: Composition-based stats.
Identities = 152/483 (31%), Positives = 247/483 (51%), Gaps = 47/483 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++KIY++++++ +F I+P +R+YVCGPTVYD +H+G+AR IVFD+L R+LR
Sbjct: 1 MQLKIYDSVQKEKVDFIPINPPEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVLRENGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + +N TDIDDKII ++ Q S I+ IT Q+++ + L +
Sbjct: 61 --KVYFAKNFTDIDDKIINKSLQTGLS------ITEITKTYIQKYLDEMEALGVERADIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT + + +IQ ++ G AY+ N I+ + + + ++ E ++ +R+
Sbjct: 113 PKATESLESICEMIQELLDKGFAYQTPNGDIYLSVAKDSKYGSLSGRVAELELQSRIHNS 172
Query: 183 YHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGG 237
K++ DF LWK + + G+ESP+G+GRPGWHIECSAM +L DIHGGG
Sbjct: 173 EQKRDSKDFALWKSYKGIGDIGYESPFGKGRPGWHIECSAMIKKHLAYSGQYAIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE +Q+ CA+ + A WIHNGF+ + G KM+KS GN I + L
Sbjct: 233 ADLLFPHHENEASQTRCAEN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------SKGI 346
+++ ++R +L THYR ++F + L A+ L + +
Sbjct: 287 --KNYDGEILRFYLLGTHYRAGLNFAEEDLLSAKKRLDRIYRIKKRIYPIQEADESQCNE 344
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILG---- 393
A+L AL +DLN A+ + + ++ K + +LG
Sbjct: 345 FKEAILEALNDDLNISKALSVVDEFINKANEFLDKKQKDKISSIAGFLAILERLLGVGGK 404
Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E + +++ IE L+ +R K K F+ AD IR++L S G + D
Sbjct: 405 NPFEYFQLGVSEEQKQEIENLIAQRTEAKKQKDFAKADEIRERLHSMGIEIMDLPTKSVW 464
Query: 452 QRM 454
+++
Sbjct: 465 EKV 467
>gi|256374515|ref|YP_003098175.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
gi|255918818|gb|ACU34329.1| cysteinyl-tRNA synthetase [Actinosynnema mirum DSM 43827]
Length = 464
Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats.
Identities = 162/479 (33%), Positives = 241/479 (50%), Gaps = 48/479 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+T R++ EF+ +YVCG TV HIG+ R + FDVL R L
Sbjct: 1 MSLHIYDTASRELREFRPQISGTASIYVCGATVQGVPHIGHVRSGLNFDVLRRWLART-- 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V VRN+TDIDDKI+ ++ Q + ++ + F L CL PT+
Sbjct: 59 HERVVLVRNVTDIDDKILVKSAQ------HDRTWWDWAFEHERAFDDAYEALGCLPPTYA 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT H+ QM+ L++ +I GHAY AN ++ F SS P YG S +++DE + G
Sbjct: 113 PRATGHVTQMVELMRRLIDAGHAYAANGDVYFSVSSFPEYGKLSGQRVDEVQQGESELTG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FD+HGGG+DLIF
Sbjct: 173 --KRDPRDFTLWKAAKPGEPSWPTPWGDGRPGWHLECSAMATEYLGSTFDVHGGGIDLIF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A W+HN ++ L G KMSKS GN ++I +LE +
Sbjct: 231 PHHENEQAQSRAVGDG--FARYWMHNAWVTLSGEKMSKSLGNTVSIPAMLEQVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------GIIDPAVL 352
AP +R ++ HYR I+++ L EA + G + +
Sbjct: 283 -APELRYYLVGPHYRSTIEYSPTALDEAVTAYRRIESFLRRVVERTGAVDAGGELGEDFV 341
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
S++ +D+ T A+ A+HK RE + A +LG++ E +
Sbjct: 342 SSMDDDMGTPGALAAVHKRVREGNTALESGDDTGARAAASSVRAMTAVLGLDPLSERWSA 401
Query: 404 ----------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +++++ +R+ K + F+ AD +R L + G +ED +
Sbjct: 402 SAGRESGTSRALKALVDRVLADRVAARKERDFARADALRDSLLAAGIAVEDTPDGPLWT 460
>gi|145351377|ref|XP_001420057.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580290|gb|ABO98350.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 497
Score = 333 bits (854), Expect = 4e-89, Method: Composition-based stats.
Identities = 174/498 (34%), Positives = 235/498 (47%), Gaps = 78/498 (15%)
Query: 11 LERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
+ RK F DP ++MYVCG TVYD++HIG+AR + FDVLYR L + VTY
Sbjct: 1 MTRKKEIFTPRDPAGKKVQMYVCGVTVYDYSHIGHARVYVAFDVLYRQLMRLGYD--VTY 58
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
RN TDIDDKII+R+ + + +T K + F +D L CL PT +PRAT
Sbjct: 59 CRNFTDIDDKIIKRSNESG------ETCEALTDKFIEAFHEDMAALGCLRPTLEPRATEC 112
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ +I I+ +I G+AYE ++ F ++P YG+ S R ++ + G RV KKNP
Sbjct: 113 VDDIIAFIERLIAKGNAYETEGDVYFSVDTLPAYGALSGRNQEDNRAGERVAVDGRKKNP 172
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
ADF LWK + P EP W SPWG GRPGWHIECSAM LG DIHGGG DL+FPHHENE
Sbjct: 173 ADFALWKTAKPGEPTWTSPWGEGRPGWHIECSAMIEKMLGPTIDIHGGGQDLVFPHHENE 232
Query: 249 IAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+AQS A W+HNGF+ ++ KMSKS GNF TI E+L+ +
Sbjct: 233 LAQSSAACGCGAHADENPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREVLD-------KY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
V+R +L HYR PI++T + L EA + QT
Sbjct: 286 HPFVLRFMLLGAHYRAPINYTQRALEEASDRVYYLYQTVHDVRAILRDAAAEEPAKKPVP 345
Query: 344 --------KGIIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNH 379
+ V AL +D+NT I L +
Sbjct: 346 LVADALKLASEAEKQVSEALNDDMNTPGVIATLSAPLKSMNDFMTTKAGKKAVGRVGALQ 405
Query: 380 DLLPIFNASAHILGIEVCKE------------HLNKNISIAIEKLVQERLILLKMKKFSS 427
LL +G+ +E H + ++ER K F+
Sbjct: 406 SLLSTVEGLMEAVGMPKDEENVILAELRARALHRAGLTEDDLLAKIEERNKARDAKDFAE 465
Query: 428 ADYIRKQLESKGFILEDY 445
+D +R +L ++G L D
Sbjct: 466 SDRLRDELSARGVGLMDG 483
>gi|33861697|ref|NP_893258.1| cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|61216283|sp|Q7V0W1|SYC_PROMP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33640065|emb|CAE19600.1| Cysteinyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 492
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 178/512 (34%), Positives = 253/512 (49%), Gaps = 77/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK++NTL + I F+ ID +++Y CG TVYD H+G+AR I +D+L R L Y +
Sbjct: 1 MIKLFNTLSKNIEVFKPIDE-VVKIYCCGVTVYDLCHLGHARSYIAWDILRRFL--IYSD 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TDIDDKI++RA++E N +++ ++ KN +F KD L + P P
Sbjct: 58 YKVKYVQNFTDIDDKILKRAKEE------NSSMNEVSEKNITEFHKDMDALGIMRPDSMP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----V 179
+ATNHI + I+ + G AY ++ + NYG S + I EQ + +
Sbjct: 112 KATNHICNICSFIKVLEDKGFAYIRGGDVYYSVFKNKNYGKLSNQNILEQNINQQGRITT 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K+NP DF LWK++ EP ++SPWG+GRPGWHIECSAM LG+ DIH GG D
Sbjct: 172 DESNKKENPQDFALWKKAKDNEPSFDSPWGKGRPGWHIECSAMVKDELGETIDIHLGGSD 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS A+ +K AN W+HNG +N+ G+KMSKS NF TI +LL++
Sbjct: 232 LIFPHHENEIAQSESANN-KKLANYWLHNGMVNVNGQKMSKSLKNFTTIRDLLDS----- 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---- 355
+R +L +YR+P+DFT + L A + I LS
Sbjct: 286 -GTSPMTLRYFVLTVNYRKPLDFTDEALKSASEAWKNINVALSLFDITKKENLSIEVNET 344
Query: 356 ---------------------------YNDLNTVSAIQALHKLAR--------------- 373
NDLNT AI +++LA+
Sbjct: 345 NEFVEETYKDMINYEISQKKIKFTNALNNDLNTAGAIAIIYELAKPLKNFINQFQRIKNL 404
Query: 374 ESTKNH-----DLLPIFNASAHILGIEVCKEHLNKNI-SIAIEKLVQERLILLKMKKFSS 427
E N + +LG++ + ++ I I L+ +RL K K ++
Sbjct: 405 EINTNEKFHLRETFKTLEELTDVLGLKKEEIIIDNRINEDQILSLINKRLGAKKEKDYAE 464
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AD IR L+ KG L D +T W +
Sbjct: 465 ADKIRNLLKEKGVELID-----QSPELTTWVR 491
>gi|212550657|ref|YP_002308974.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|229558615|sp|B6YQU1|SYC_AZOPC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|212548895|dbj|BAG83563.1| cysteinyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 492
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 161/498 (32%), Positives = 243/498 (48%), Gaps = 55/498 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
MK ++ IYNTL + FQ++ P + +YVCGPTVY H+G+ARP I FD+L+R L +
Sbjct: 1 MKNQLFIYNTLTGRKELFQSLYPKRVGLYVCGPTVYGDPHLGHARPAITFDILFRYLMHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD+ +DKI +AR E + + K
Sbjct: 61 --NYKVRYVRNITDVGHLTSDSDLGEDKIARKARLEDLE------PMEVVQHYLNLYHKT 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L L P+ +P A+ HI + I LI+ I+ G+AYE+ + FD NYG S
Sbjct: 113 MDALNVLPPSIEPHASAHIIEQIQLIKEILEKGYAYESKGSVYFDVEKYNKKYNYGKLSG 172
Query: 168 RKIDEQ-KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
+ I + ++ + K+NP DF LWK+++ W SPW G PGWH+EC+ MS
Sbjct: 173 QNIADMLNTTRKLDGQEGKRNPIDFALWKKASSKHIMQWISPWSNGFPGWHLECTTMSRK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG +FDIHGGG+DLIFPHHE EIAQ + E W+HN + + G+KM KS+ NF
Sbjct: 233 YLGNLFDIHGGGMDLIFPHHECEIAQKVASTGYE-GVKYWMHNNMVTVNGQKMGKSSNNF 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
I + +L +S+ +R +L +HYR IDF+ + L ++ LS+ + + +
Sbjct: 292 INLEQLFNGTNPLLIQSYNPMTVRFFILQSHYRNTIDFSNKALQASKKGLSRLLEANNNI 351
Query: 345 GIIDPAV--------------LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
+ + A+ +DLNT I L + R
Sbjct: 352 KQLTAQTTNSTVNIEGLRNKSIEAMNDDLNTPIIISYLFEATRIVNSALAKQTQLTTEDI 411
Query: 390 ------------HILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
++LGI+ ++ N + + A++ L+Q R+ + K + AD IR +
Sbjct: 412 QQLKDFFQLFLFNLLGIKDELKYKNTSYNSFAKAVDLLLQIRVQAKQEKNWIFADKIRDE 471
Query: 435 LESKGFILEDYKNPDNGQ 452
L GF ++D KN +
Sbjct: 472 LTVLGFEVKDTKNGFEWK 489
>gi|298674878|ref|YP_003726628.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
gi|298287866|gb|ADI73832.1| cysteinyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
Length = 486
Score = 333 bits (853), Expect = 4e-89, Method: Composition-based stats.
Identities = 157/508 (30%), Positives = 230/508 (45%), Gaps = 73/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YN+L K+ F +D +RMY CGPTVY HIGN R ++ D+L R L
Sbjct: 1 MSIKLYNSLTNKVESFIPVDDKFVRMYNCGPTVYGRVHIGNIRSFLMADLLKRFLNLEGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V NITD+ +DK+ A +E I K Q F+ D
Sbjct: 61 Q--VRQAMNITDVGHMTSDSDEGEDKLQVAADKEKLD------PWKIADKYKQLFIDDLN 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L PRAT HI +MI +I+ +I +G+AY + + FD + P YG S +++
Sbjct: 113 KLNIDDADVYPRATQHINEMIEVIKKLIDNGYAYVSGGNVYFDITKFPEYGKLSGNVLEK 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ R +K+NP DF+LW + W+SPWG G PGWHIECSAM+ YL
Sbjct: 173 LQSQERAVYDPYKRNPQDFVLWFSHSKYKNHIMNWDSPWGEGYPGWHIECSAMALKYLTD 232
Query: 230 ------------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
DIH GG D FPHHE EIAQS A +K N W+H L +EG K
Sbjct: 233 AFNKHFDSEKSTTIDIHTGGEDNKFPHHECEIAQSEGATG-QKFVNYWMHVTHLLVEGDK 291
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS N T+ ++L + + +R +L THYR+ ++FT + L ++ + +
Sbjct: 292 MSKSLNNIYTLPDILN------QGYKPEAVRYVLLTTHYRQKLNFTFKNLQASQNAIDRL 345
Query: 338 P----------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD- 380
+ + + L NDLN AI L + + K+
Sbjct: 346 QELIFNLKHIGNESGDFEAEKFAEKVKDDFIKELENDLNIAGAIGVLFEAVKTINKSLTN 405
Query: 381 --------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
LL + +LG+ E + I++L+++R K F++AD IR
Sbjct: 406 IGQQEADILLDMLKDVDKVLGVLDFSEQAP--LEKEIQELIEQRDRARDSKDFATADKIR 463
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
L+ +G L D T WK++
Sbjct: 464 DNLKKRGIHLIDT------PEGTIWKRE 485
>gi|325829816|ref|ZP_08163274.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
gi|325487983|gb|EGC90420.1| cysteine--tRNA ligase [Eggerthella sp. HGA1]
Length = 501
Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats.
Identities = 177/512 (34%), Positives = 245/512 (47%), Gaps = 81/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNT R +F+ ++ + MYVCGPTVY++ HIGNAR I FDV+ R L + +
Sbjct: 1 MIRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N+TD+DDKII ++ +E S + + ++ T+ F++D L P +P
Sbjct: 61 --VTFVQNVTDVDDKIIGKSLEEGRSA------AEVAAEYTEAFIEDMRAAGVLDPDIRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
+AT IP MI LIQ +I GHAY+A+ ++ F+ S P YG S R +DE + G R
Sbjct: 113 KATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRAD 172
Query: 182 ----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K++P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FDIHGGG
Sbjct: 173 GKGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE AQS A AN W+H G L + KMSKS GNF + ++L
Sbjct: 233 ADLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R ML THYR P+DF+ +RL EA L + +
Sbjct: 287 --KVTDPKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDWQLQNAQDIPSP 344
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HD 380
A + A+ +D NT A+ + D
Sbjct: 345 LDTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADKTISLSDVPPVRD 404
Query: 381 LLPIFNASAHILGIEVCKEHLNKNI---SIAIEKLVQ-----ERLILLKM---------- 422
+ + GI+V + + L E +
Sbjct: 405 ARGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARAD 464
Query: 423 ----KKFSSADYIRKQLESKGFILEDYKNPDN 450
K +S AD +R L GF++ED
Sbjct: 465 ARAAKDWSRADAVRDGLCGLGFVIEDTPQGAR 496
>gi|331012668|gb|EGH92724.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 391
Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats.
Identities = 158/385 (41%), Positives = 222/385 (57%), Gaps = 25/385 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 8 LSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYEL 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
TYVRNITDIDDKII RAR ++ +T++ +D RL L P +PR
Sbjct: 68 --TYVRNITDIDDKIINRARDNG------ESFDALTARMIDAMHEDEARLNILKPDMEPR 119
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 120 ATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVDE 179
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG FDIHGGG DL FP
Sbjct: 180 SKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGDTFDIHGGGSDLEFP 239
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 240 HHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYH 291
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSAL 355
V+R ++ +HYR I+++ L E++ L ++ + +P +A+
Sbjct: 292 PEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAM 351
Query: 356 YNDLNTVSAIQALHKLARESTKNHD 380
+D T A L ++ RE + +
Sbjct: 352 NDDFGTPEACAVLFEMVREINRLRE 376
>gi|257791977|ref|YP_003182583.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|317489986|ref|ZP_07948478.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
gi|257475874|gb|ACV56194.1| cysteinyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|316910984|gb|EFV32601.1| cysteinyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
Length = 501
Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats.
Identities = 177/512 (34%), Positives = 245/512 (47%), Gaps = 81/512 (15%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNT R +F+ ++ + MYVCGPTVY++ HIGNAR I FDV+ R L + +
Sbjct: 1 MIRLYNTKTRTKVDFETLERGKVGMYVCGPTVYNYIHIGNARTFISFDVIRRYLMWRGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N+TD+DDKII ++ +E S + + ++ T+ F++D L P +P
Sbjct: 61 --VTFVQNVTDVDDKIIGKSLEEGRSA------AEVAAEYTEAFIEDMRAAGVLDPDIRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
+AT IP MI LIQ +I GHAY+A+ ++ F+ S P YG S R +DE + G R
Sbjct: 113 KATEEIPAMIELIQELIDGGHAYDADGDVYFNVRSFPAYGELSGRNVDEMESGHRELRAD 172
Query: 182 ----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K++P DF LWK + P EP WESPWG GRPGWHIECSAMS YLG FDIHGGG
Sbjct: 173 GKGVEDRKRDPLDFALWKAAKPGEPAWESPWGMGRPGWHIECSAMSRKYLGLPFDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE AQS A AN W+H G L + KMSKS GNF + ++L
Sbjct: 233 ADLVFPHHENERAQSEAACGC-TFANYWMHGGMLQINSEKMSKSLGNFKLLRDVL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ V+R ML THYR P+DF+ +RL EA L + +
Sbjct: 287 --KVTDPKVLRFLMLQTHYRSPLDFSDERLAEAGAALCRIENAVKNLDWQLQNAQDIPSP 344
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HD 380
A + A+ +D NT A+ + D
Sbjct: 345 LDTRELMKRTKEAKLAFILAMDDDFNTCKALGEVFDFVAAVNAQTADRTISLSDVPPVRD 404
Query: 381 LLPIFNASAHILGIEVCKEHLNKNI---SIAIEKLVQ-----ERLILLKM---------- 422
+ + GI+V + + L E +
Sbjct: 405 ARGVIVELMGVFGIDVEAASASCAAGGYPPEVVGLAADIAGYEGADAAEAVDALLAARAD 464
Query: 423 ----KKFSSADYIRKQLESKGFILEDYKNPDN 450
K +S AD +R L GF++ED
Sbjct: 465 ARAAKDWSRADAVRDGLCGLGFVIEDTPQGAR 496
>gi|117927293|ref|YP_871844.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|166200127|sp|A0LQZ8|SYC_ACIC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|117647756|gb|ABK51858.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 469
Score = 333 bits (853), Expect = 5e-89, Method: Composition-based stats.
Identities = 174/480 (36%), Positives = 244/480 (50%), Gaps = 50/480 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T R + EFQ DP + MYVCG TV HIG+ R +VFDVL R L +
Sbjct: 1 MPLRLHDTRSRGLREFQPADPPRVTMYVCGATVQAPPHIGHLRSGLVFDVLVRWLAVHGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V + RN+TDIDDKI+ A E + +N + F L C+ PT +
Sbjct: 61 D--VVFCRNVTDIDDKILRVAAAEGI------PWWQVAYRNYRLFDSAYRLLGCVPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT HIPQ+I LI+ +I GHAY A ++ F S P YG S R D + G
Sbjct: 113 PWATGHIPQIIALIRRLIDAGHAYPAGGDVYFAVRSFPAYGGLSGRDPDALQAGESDGV- 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG FDIHGGGLDL+F
Sbjct: 172 -HKRDPLDFALWKGAKPGEPSWESPWGPGRPGWHIECSAMSTTYLGSTFDIHGGGLDLLF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A A W+HNG + L G KMSKS GN +++++LLE +
Sbjct: 231 PHHENECAQSQAAGDG--FARYWLHNGLVTLRGEKMSKSLGNVLSMDQLLELVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK--------------WPQTSTSKGIID 348
+R ++ HYR +DF+ + L EA + P G+ID
Sbjct: 283 -PIELRYYLIGAHYRSTLDFSEESLEEAAAAYRRIEGFLLRAQELVGELPAADPQTGLID 341
Query: 349 ---PAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV 396
P ++AL +DL A+ +H + R+ L A ++G+
Sbjct: 342 RLPPEFVAALDDDLAVPRALAVMHSVVRQGNAALAETDKTAVRRFLGEVTAMLDVMGLRP 401
Query: 397 CK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ L + + ++ ER + + F++AD +R +L G ++ED +
Sbjct: 402 PDDGSRLDALRRVVDNLARLVLDEREAARQRRDFATADALRARLTDAGIVVEDTPSGPRW 461
>gi|294495735|ref|YP_003542228.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
gi|292666734|gb|ADE36583.1| cysteinyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
Length = 471
Score = 332 bits (852), Expect = 5e-89, Method: Composition-based stats.
Identities = 162/490 (33%), Positives = 240/490 (48%), Gaps = 56/490 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL RK F + + +Y CGPTVY+ HIGN R ++ D L R+L Y
Sbjct: 1 MLRLYNTLTRKKEVFHPLKEEEVSIYACGPTVYNIPHIGNYRTFLMTDNLVRILEYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDK I +++ S+ T K T++F L + P
Sbjct: 60 -TVNLVMNITDIDDKTIRDSKKAGMSL------KEFTEKYTEEFFCGLDMLNIQRASSYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT ++ MI L Q ++ G AYE + + + ++ P YG S+ + K+G V
Sbjct: 113 RATENVDGMIELAQTLMEKGLAYEKDGSVYYRIAAFPEYGKLSKLDFNSIKVGASVDVDE 172
Query: 184 HK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ NP DF+L K ST E +ESPWG+ RPGWH ECS MS ++ G DIH GG+
Sbjct: 173 YDKDNPRDFVLLKASTQEEIERGIYYESPWGKIRPGWHTECSVMSMNHFGPSLDIHTGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A + WIH L ++G KMSKS GN T+ EL+E
Sbjct: 233 DLIFPHHENEIAQSEGATG-KPFVRYWIHGEHLIVDGEKMSKSKGNVFTLPELVE----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------- 344
+ V+R + HYR+ +DF+ A+ K +T +
Sbjct: 287 --KYGGEVVRFMFMSVHYRKKLDFSDSFAQNAQNSYFKLRETLENLQFAIKGADDNEYPS 344
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
G ++ +AL +D+N AI H+L+R S + + LL ++
Sbjct: 345 DKEMIDLSGNLEDDFRNALEDDMNIPKAIAVYHELSRISNQYLESGRNKDVLEKLLSLYR 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
A LGI + + + I +LV+ R K + + +AD +R+++ +GF+++D
Sbjct: 405 KFADTLGIFAQE---GEEVPEEIMELVKIREQARKDRDWDTADALREKIAQEGFVVQDTC 461
Query: 447 NPDNGQRMTR 456
N +R R
Sbjct: 462 EGPNVKRQKR 471
>gi|160903262|ref|YP_001568843.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
gi|187629839|sp|A9BGT9|SYC_PETMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|160360906|gb|ABX32520.1| cysteinyl-tRNA synthetase [Petrotoga mobilis SJ95]
Length = 469
Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats.
Identities = 170/480 (35%), Positives = 253/480 (52%), Gaps = 47/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKIY+TL ++ + + I++Y+CGPTVY+ HIGNARP+I+FD R L Y
Sbjct: 5 PTIKIYDTLSGQVVDLVPVKEGEIKIYLCGPTVYNLLHIGNARPIIIFDAFRRFLEYIGY 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT V+N TDIDDKIIE+A++E N + + ++ +D T L A
Sbjct: 65 --KVTLVQNFTDIDDKIIEQAKKE------NLPFEEVGKRYIIEYWRDMTALKARAFNFH 116
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+ TN++ ++I I+ + G+AY+ N ++ F+ YG S RK+++ K+G RV
Sbjct: 117 PKTTNYVDEIISYIKELEEKGYAYKAENGDVYFEVEKFSRYGELSHRKVEDLKVGVRVEV 176
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+KKNP DF LWK S EP WESPWG+GRPGWHIECS MSS LG FDIH GG DLI
Sbjct: 177 SEYKKNPLDFALWKASKEGEPFWESPWGKGRPGWHIECSVMSSEILGDTFDIHAGGNDLI 236
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQ+ + A W+HNG + + KMSKS GN + +LL +
Sbjct: 237 FPHHENERAQAIAKSG-KDFAKYWMHNGMIRMAQDKMSKSLGNVWYLRDLL-------KK 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTSTSK 344
+ + V+++ +L HYR PID + + L E+ +++ PQ
Sbjct: 289 FDSDVLKIFILSKHYRIPIDVSEELLRNQEVSVNRVKESLNEAETFFNGKVPCPQKMNYF 348
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP----------IFNASAHILGI 394
+ ++S+L ND +T S + + +L+R+ K + I N +LG+
Sbjct: 349 KEQEEYLISSLSNDFDTPSVVARIFELSRDLNKALNSRDEETIKNNYYIIRNIYGSVLGV 408
Query: 395 EVCKEHLNKN---ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E + KN ++ +E ++ R L + K ++ +DYIR L G ++D
Sbjct: 409 FETNEQIQKNNVELNQLMEIILNVRSALREEKLYNLSDYIRDNLSKIGIEIKDTPEGTKW 468
>gi|46198845|ref|YP_004512.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
gi|61216249|sp|Q72KB0|SYC_THET2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|46196468|gb|AAS80885.1| cysteinyl-tRNA synthetase [Thermus thermophilus HB27]
Length = 480
Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats.
Identities = 160/493 (32%), Positives = 240/493 (48%), Gaps = 61/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+TL R+ F+ P ++ +YVCGPTVY H+G+AR +V+D+L R +
Sbjct: 1 MGLVIYDTLARRKVPFEPAVPGHVGIYVCGPTVYSDPHLGHARGPVVYDILRRYFLHKGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI+ RA+ E + K +
Sbjct: 61 --KVRFVSNITDVGHLTDDADEGEDKIVRRAKLERLE------PMEVADKYMWSYFDAMQ 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P+ PRA+ HIP+M+ L + ++ GHAYE + F S P YG S ++++E
Sbjct: 113 ALNVLRPSIAPRASGHIPEMLELTERLLARGHAYERKGSVYFRVRSFPEYGKLSGKRLEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ G RV + K++P DF LWK + P W+SPWG G PGWHIEC+AMS YLG+ F
Sbjct: 173 LRAGARVEVREEKEDPLDFALWKAAEPGHIMRWKSPWGEGYPGWHIECTAMSLKYLGEGF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
D+H GG+DL FPHHE EIAQ+ A + A W+H+ + LEG KM+KS GN + +++L
Sbjct: 233 DLHAGGIDLQFPHHECEIAQAEAAG--FRFARHWMHHNHVLLEGEKMAKSTGNLVLLHDL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------- 343
LE + +R +L THYR P+DFT + L A+ +
Sbjct: 291 LEAHE-------PMALRFYLLQTHYRSPMDFTWEGLESAKRGYGRLLHAYREVRGRKKTA 343
Query: 344 -----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNA 387
++ A + A+ +DL+T A+ AL E K + L A
Sbjct: 344 PPGTTPELERALDALEKAFMEAIEDDLSTPEALAALFAFLPELHKLLPEAKAESLARAEA 403
Query: 388 SAHILGIEVCKEHLNKNISIAIE---------KLVQERLILLKMKKFSSADYIRKQLESK 438
H LG + + + + L++ R + K + +D IR++L +
Sbjct: 404 VFHTLGEGILGLFPERVLEERVSGPLLEGLIALLLELREEARRAKDYEKSDLIRERLRAL 463
Query: 439 GFILEDYKNPDNG 451
G I+ED K
Sbjct: 464 GVIVEDTKEGPRW 476
>gi|284929429|ref|YP_003421951.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
gi|284809873|gb|ADB95570.1| cysteinyl-tRNA synthetase [cyanobacterium UCYN-A]
Length = 482
Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats.
Identities = 165/500 (33%), Positives = 243/500 (48%), Gaps = 67/500 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F ++ + ++MY CG T YDF H+G+AR I++D + L + E
Sbjct: 1 MLVIYNTLTRTKEPFITLEEARVKMYCCGITTYDFCHLGHARTCIIWDTVRNYLEWIGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N TD+DDKI+ RA +E + + +++K + +D RL + P
Sbjct: 61 --VKYVQNFTDVDDKILSRAIKEKTT------MEEVSNKFINAYFEDMERLNVKKASVYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------GT 177
R T+ I + LI + GHAY + ++ FD S +YG S RK+++ K
Sbjct: 113 RVTHIIDDIQNLIGELEKSGHAYLSEGDVYFDIKSYKDYGKLSGRKLEDLKAGASGRVSL 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+K K++PADF +WK++ P E W+S WG+GRPGWHIECSAM LG+ D+H GG
Sbjct: 173 EDFQKNKKRDPADFAVWKKAKPTEKSWDSKWGKGRPGWHIECSAMIKKELGETIDLHVGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENEIAQS E + W HNG + ++G KMSKS GNF TI ELL+
Sbjct: 233 SDLIFPHHENEIAQSEAITGKE-LSRYWSHNGMVKVDGEKMSKSLGNFTTIRELLD---- 287
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------SKWPQ 339
+ V+RL +L THYR P+DF+ L A K
Sbjct: 288 ---QFEPMVVRLFILQTHYRNPLDFSHNSLVAATNSWQTLSDGLLFGYQYGEKLNFKNNP 344
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------------- 383
+ + A+ +D N + L ++A+ K ++L
Sbjct: 345 ATELLPDLVNRFKKAINDDFNFAGGLAVLFEIAKNLRKESNVLTHTGVTTLSSNFLETQW 404
Query: 384 -IFNASAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ A +LG+E + E K I++LV++R I K++ +D IR +L+
Sbjct: 405 HTLKSLAKLLGLEANQTTLKIELFKKLTDEEIDELVKKRKIAKNAKQYKESDLIRDKLKE 464
Query: 438 KGFILEDYKNPDNGQRMTRW 457
L D + T W
Sbjct: 465 NNITLLDMSDGS-----TVW 479
>gi|295698510|ref|YP_003603165.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
gi|291157420|gb|ADD79865.1| cysteinyl-tRNA synthetase [Candidatus Riesia pediculicola USDA]
Length = 469
Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats.
Identities = 175/491 (35%), Positives = 251/491 (51%), Gaps = 56/491 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNT+ RK +F I + MYVCG T YD HIG+ R +FD++ + LR+
Sbjct: 1 MLKIYNTIHRKKEKFIPIVKGKVSMYVCGITAYDLCHIGHGRTFTIFDMITKYLRFMGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +VRNITDIDDKII++A Q+ + K T++ KD L P +P
Sbjct: 60 -KVNHVRNITDIDDKIIQKAIQKKTDYEF------LAQKMTEEMRKDFRNLKISQPNIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKID---EQKMGTRV 179
+T+++ I LI+ + +G Y + + +I+F+T P YG+ S+R E+K G +
Sbjct: 113 NSTSYVQSTIDLIKILEKNGKTYRSLSGDILFNTKENPEYGNLSKRNEILNLERKFGRNI 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KK +DFILWK + EP W SPWG+GRPGWH EC+AMS+ LGK FDIHGGG D
Sbjct: 173 KNLQSKKCLSDFILWKSAKEGEPFWNSPWGKGRPGWHTECAAMSTKILGKNFDIHGGGSD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE QS A + AN WIH G L ++ +KMSKS+GNF I ++
Sbjct: 233 LIFPHHENERIQSIVAYG-DNFANYWIHTGMLKIQEKKMSKSDGNFFKIRDICSA----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------STSKGI 346
+ + VIR L +HYR +++++ ++ +++ L K +
Sbjct: 287 --YNSEVIRYFFLSSHYRHHLNYSINKINQSKRSLEKLYFSLIGTNPEHPIQKNDRYLEK 344
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK 398
+ A + A+ +D NT A L K+++E L I A++LG+
Sbjct: 345 FEKAFIEAMNDDFNTPKAYSILFKISKEINLQKKININIANRLAKILKKMANVLGLLNQS 404
Query: 399 EH---------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
H L + + IE ++Q R K K + AD IRK L G ILED N
Sbjct: 405 VHQFFKINRITLKEIKNQEIENIIQIREKARKNKNWEEADRIRKDLYQIGIILEDRINK- 463
Query: 450 NGQRMTRWKQK 460
T W+ K
Sbjct: 464 -----TYWRIK 469
>gi|258591299|emb|CBE67598.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS) [NC10
bacterium 'Dutch sediment']
Length = 530
Score = 332 bits (852), Expect = 6e-89, Method: Composition-based stats.
Identities = 180/534 (33%), Positives = 247/534 (46%), Gaps = 101/534 (18%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL +K F+ P +RMY CGPTVYD AHIG+AR + FDV++R L
Sbjct: 1 MALVVYNTLHQKKERFEPAVPGEVRMYACGPTVYDRAHIGHARAALTFDVVWRYLERRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V+YVRN TD+DDKII+RA + S + + + + +D L PT +
Sbjct: 61 --KVSYVRNYTDVDDKIIQRAAELGQSRES------LVEEQIEAYRRDMDALGLRTPTEE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HI +MI +I+ ++ G AY + ++ F+ +YG S R +DE + G RV
Sbjct: 113 PRATRHIREMIEIIRTLMAKGVAYSVDGDVYFEVRRSSDYGKLSHRGLDELQAGARVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP WESPWG GRPGWHIECSAMS YLG+ FDIHGGG DLIF
Sbjct: 173 PRKRDPLDFALWKASRPGEPAWESPWGPGRPGWHIECSAMSMKYLGETFDIHGGGADLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA + A WIHNGF+N+ KMSKS GN +TI ELL
Sbjct: 233 PHHENEIAQSECATG-KPFARYWIHNGFVNIRAEKMSKSLGNILTIRELLGR-------I 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------------- 345
+L +L THYR P++F+ L A +++
Sbjct: 285 SPCAFKLFLLGTHYRAPVEFSEDALISATAAAARFHTVLEEVQRFQDVQGSKADRSRMDS 344
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------L 381
+ A+ +D NT A+ AL L +
Sbjct: 345 LPLSGQIREAEQEYTDAMDDDFNTPRALAALFNLTKGVNVALRDVDGAPEPSLVYGLSMA 404
Query: 382 LPIFNASAHILG--IEVCKEHLNKNI---------------------------------- 405
+LG E +E +++ I
Sbjct: 405 GETLRTLGSVLGGLFEGPREVVDRLIMTPSAGTSTSGTAASVLRITGDDYCKAREAVESA 464
Query: 406 --------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ AI +V R + K +++AD IR L + G +++D +
Sbjct: 465 MASGHTPPTEAIRTIVAYRALCRDRKDWTTADAIRTWLTNLGVVVDDTGDGVRW 518
>gi|255585350|ref|XP_002533372.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223526794|gb|EEF29017.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 530
Score = 332 bits (852), Expect = 7e-89, Method: Composition-based stats.
Identities = 179/524 (34%), Positives = 256/524 (48%), Gaps = 90/524 (17%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + K+YNT+ R++ F+ P + MYVCG T Y F+HIG+AR ++FDVL+R L++
Sbjct: 4 KVEFKLYNTMNRQLEAFKPHVPGKVGMYVCGVTAYAFSHIGHARAAVIFDVLFRYLQHLG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VTY RN TDIDDKII+RA + + ++S+ ++++ D L CL PTH
Sbjct: 64 YE--VTYARNFTDIDDKIIKRANESG------EDPFSLSSRFCEEYLVDMDSLQCLRPTH 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR T+HI Q+ +I II +G AY + ++ F PNYG S +K++ + G R
Sbjct: 116 QPRVTDHIEQIKDMITQIINNGFAYPSEGDVFFAVDKFPNYGQLSGQKLENHRAGER-NP 174
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF LWK + P EP WESPWG GRPGWHIECSAMS+ YL FDIHGGG DLI
Sbjct: 175 DTRKRNPADFALWKAAKPGEPSWESPWGPGRPGWHIECSAMSAQYLTFKFDIHGGGSDLI 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEI QS A E + WIHNG + KMSKS GN+ TI E+ E
Sbjct: 235 FPHHENEITQSAAAC-QESNVSYWIHNGHVTNNNEKMSKSLGNYFTIREVTER------- 286
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------------------- 339
+ +R ++ HYR P+++TV +L A + Q
Sbjct: 287 YHPLAVRHFLISAHYRSPLNYTVFQLESASDAIFYIYQTLQDCEDALSMFQDGSLKEGAA 346
Query: 340 -----------TSTSKGIIDPAVLSALYNDLNTVSAIQ-ALHKLARESTKNHDLLP---- 383
+ + + +DL+T + A + + +L
Sbjct: 347 QNSKVVGITADAKKCINKLRDEFETKMSDDLSTSHILTGAFQDALKFINSSISMLKKKLQ 406
Query: 384 ----------------IFNASAHILGI-------EVCKEHLNKNI------SIAIEKLVQ 414
+ILG+ E+ ++ +K + + + ++
Sbjct: 407 KPQQLSLIQSLTEIEREIKLVLNILGLLPPGTYAEILQQLKDKALKRAGVTEDDVLRSIE 466
Query: 415 ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
ER K K+FS +D +R L +KG L D + T W+
Sbjct: 467 ERAQARKNKEFSRSDQVRANLAAKGIALMD------VGKETVWR 504
>gi|327311486|ref|YP_004338383.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326947965|gb|AEA13071.1| cysteinyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 480
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 161/473 (34%), Positives = 235/473 (49%), Gaps = 44/473 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT +++ +F P YVCG T YD H+G+ R + FD+ R L
Sbjct: 7 LRIYNTATKRMEQFSVRTPGIASGYVCGITPYDSVHVGHGRVYVFFDMFRRYLERLG--L 64
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII RAR+E + + + + ++ RL PR
Sbjct: 65 QVRLVVNFTDIDDKIINRAREEFGADSVKR-WREVPERYISEYFDVMRRLYVKPAYAYPR 123
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I+ ++ G AY + + F+ +P YG FS ++I+E G RV +
Sbjct: 124 VTENVEDMLGWIKALVDKGFAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARVEPEP 183
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK +P EP W+SPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 184 GKRNPLDFALWKSWSPGEPWWDSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 243
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L +
Sbjct: 244 HHENEIAIARAMFGVDYFARYWIHVGYLTVRGEKMSKSLGNIITLREVLS-------KYS 296
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
+RLA M+HYR+P++F+ + L AE ++ G
Sbjct: 297 GEALRLAYAMSHYRKPMEFSFELLDRAEDMVKTLYTAYDELGQAVADAGEGGSEPVVEPF 356
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHI 391
AL +D +T A Q L+ AR D+L + A +
Sbjct: 357 YKYVEGFYEALNDDFSTNEAAQRLYDAARYIISTVLHKIDKISREAVLDVLSKYVEMADV 416
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ +E + K + A++ LV+ R L + +++ AD IR++L + G L D
Sbjct: 417 LGLLERRE-VPKEVQEAVKALVEARARLRQERQYQLADQIRERLSALGVDLHD 468
>gi|255524399|ref|ZP_05391356.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296187519|ref|ZP_06855914.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|255511956|gb|EET88239.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
gi|296048041|gb|EFG87480.1| cysteinyl-tRNA synthetase [Clostridium carboxidivorans P7]
Length = 471
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 157/492 (31%), Positives = 232/492 (47%), Gaps = 55/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+YNT+ RK +F I + MY CGPTVY+FAHIGN R I DVL + LRY
Sbjct: 1 MDFYVYNTMSRKKEKFVPILEGKVGMYTCGPTVYNFAHIGNLRTYIFEDVLKKSLRYLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
E V +V NITD+ +DK+ A++E N ++ I F+ D
Sbjct: 61 E--VKHVMNITDVGHLQSDADEGEDKMELGAKRE------NKSVWEIAKFYENAFLDDCK 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L PT RAT HI MI LI+ + G+ Y +N + ++ +Y + ++E
Sbjct: 113 KLNVETPTVICRATEHIDDMINLIKKLEEKGYTYISNGNVYYEIDKFEDYNKLANLSMEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV +KKNP DF+LW + W+SPWGRG PGWH+ECSAMS YLG+
Sbjct: 173 LEAGNRVEVDENKKNPLDFVLWFTNSKFKNQIMQWDSPWGRGFPGWHLECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H GG+D I HH NEIAQS A K N W+H FL L+ KMSKS G
Sbjct: 233 RIDVHCGGVDHIPVHHTNEIAQSEGAIG-HKWVNYWMHGEFLVLDSGKMSKSKG------ 285
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
+ L K + V R L + YR+ + F+ L +AEI K +
Sbjct: 286 DFLTVNKLEEEGFNPLVYRYFCLQSRYRKQLLFSFDALKDAEIAYKKLKNKVAALAKDAK 345
Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAHILG 393
+ +DLN +A L ++ +++ + + + + +L
Sbjct: 346 EDQRLDLEKIKNYKNKFAEKISDDLNMPNAFTVLWEVVKDNELTSREKCHLVESFDTVLS 405
Query: 394 IEVCKEHLNKNIS-----IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + + + +N+ +++L++ER + K K +S AD IR +L + D K
Sbjct: 406 MNLFEPNEEQNLDSNIDSELVDELIKERDMARKNKDWSKADEIRDKLSFMNIEILDSK-- 463
Query: 449 DNGQRMTRWKQK 460
T+WK K
Sbjct: 464 ----EGTKWKLK 471
>gi|257457848|ref|ZP_05623007.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
gi|257444561|gb|EEV19645.1| cysteinyl-tRNA synthetase [Treponema vincentii ATCC 35580]
Length = 487
Score = 332 bits (851), Expect = 7e-89, Method: Composition-based stats.
Identities = 167/507 (32%), Positives = 247/507 (48%), Gaps = 71/507 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL KI +F +DP + Y CGPTVY++AHIGN R + D L RLLR+
Sbjct: 1 MSLRIYNTLGHKIEDFVPVDPGKVGFYGCGPTVYNYAHIGNLRAYVFQDTLSRLLRFLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
VT+V NITDI +DK+++ A++ S+ I T+ F KDT
Sbjct: 61 --PVTHVMNITDIGHLSGDADDGEDKMVKTAKERGQSVL------EIADFYTKAFFKDTE 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P +AT+H+ MI LI+ I +GH Y A + +D + P YG + K+++
Sbjct: 113 RLNIRRPDVVCKATDHVQDMIELIKRIEANGHTYSAGGNLYYDIMTFPKYGELASIKLED 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
K G R+ +K+NP DF+LW + E W+SPWGRG PGWHIECSAMS YLG+
Sbjct: 173 LKAGARIEVDENKRNPHDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG+D I HH NEIAQS A +K W+HN FL + KMSKS G+FIT++
Sbjct: 233 QFDIHTGGIDHIRIHHTNEIAQSEGATG-KKWVKYWLHNEFLVMNKGKMSKSTGDFITLD 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSKG 345
+++E + R +L HYR + F+ + + + L +
Sbjct: 292 KVIEA------GYAPLDYRFLLLGGHYRTQLTFSWEAMETAKNARKNLEQRIANLLAEAK 345
Query: 346 IIDPA-------------------------VLSALYNDLNTVSAIQALHKLAREST-KNH 379
+ + AL D++T A+ L + ++ +
Sbjct: 346 TLPDFPSGNVTAEQAEQLLHTEKARCYLADFVQALEEDISTPRALSVLQQAVKDKELEAA 405
Query: 380 DLLPIFNASAHILGIEVCKEH-------LNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + + +L + + +E + + + IE+LV ER K K F AD IR
Sbjct: 406 EAITLIRIFDAVLALRLIEEAEALHTGGESVDNAEEIERLVAERTEAKKNKDFKRADEIR 465
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
L+++G LED T W++
Sbjct: 466 NILKNRGIALEDTAT------GTLWRK 486
>gi|309787051|ref|ZP_07681663.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
gi|308924629|gb|EFP70124.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 1617]
Length = 437
Score = 332 bits (851), Expect = 8e-89, Method: Composition-based stats.
Identities = 165/470 (35%), Positives = 235/470 (50%), Gaps = 70/470 (14%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD HIG+ R + FDV+ R LR+ + YVRNITDIDDKII+RA +
Sbjct: 1 MYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY--KLKYVRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
++ + + + KD L L P +PRAT+HI ++I L + +I GHAY
Sbjct: 59 ------ESFVALVDRMIAEMHKDFNALNILRPDMEPRATHHIAEIIELTEQLIAKGHAYV 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++FD + P YG SR+ +D+ G RV K+N DF+LWK S EP W S
Sbjct: 113 VDNGDVMFDVPTDPTYGVLSRQDLDQLLAGARVDVVDDKRNTMDFVLWKMSKEGEPSWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQS CA + N W+
Sbjct: 173 PWGAGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQ-YVNYWM 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G + ++ KMSKS GNF T+ ++L + + A +R ++ HYR ++++ +
Sbjct: 232 HSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEEN 284
Query: 327 LTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLAREST- 376
L +A L + + + A+ +D NT A L +ARE
Sbjct: 285 LKQARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNR 344
Query: 377 -KNHDLLPI------FNASAHILGIEVCKEH--------LNKNISIAIEKLVQERLILL- 420
K D+ + +LG+ + + + IE L+Q+RL
Sbjct: 345 LKAEDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARK 404
Query: 421 ----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +L G +LED G + T W++K
Sbjct: 405 AKDWAAADAARD-----------RLNEMGIVLED------GPQGTTWRRK 437
>gi|21228013|ref|NP_633935.1| cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
gi|24418695|sp|Q8PVQ1|SYC_METMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|20906443|gb|AAM31607.1| Cysteinyl-tRNA synthetase [Methanosarcina mazei Go1]
Length = 473
Score = 332 bits (851), Expect = 9e-89, Method: Composition-based stats.
Identities = 157/487 (32%), Positives = 234/487 (48%), Gaps = 55/487 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL R F+ + + +Y CGPTVY+ HIGN R ++ D + R L+Y
Sbjct: 1 MLQVYNTLTRNKETFKPLKEGEVSIYACGPTVYNMPHIGNYRTFLLADTVVRTLQYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDK I ++ S+ T K + +F K L + P
Sbjct: 60 -KVKLVMNITDIDDKTIRDSKAAGMSL------KDFTDKYSAEFFKGLDMLNIKRASAYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT ++ MI L Q +I G AYE + + S P+YG S+ D ++G V
Sbjct: 113 RATENVDGMIELAQKLIEKGLAYEKGGSVYYRISGFPDYGKLSKLDFDSIRIGASVDVDE 172
Query: 184 HK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ NP DF L K S P E +ESPWG+ RPGWHIECS M+ + G D+H GG+
Sbjct: 173 YDKDNPRDFALLKASAPEEIERSIYYESPWGKIRPGWHIECSVMAMNSFGPTLDVHIGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A I WIH L +EG KMSKS GN T+ E++E
Sbjct: 233 DLIFPHHENEIAQSEGATGI-PFVRHWIHGEHLIVEGEKMSKSKGNVFTLPEIVEM---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R L HYR+ +D++ A+ K +T +
Sbjct: 288 ---YGGEVVRFMFLSVHYRKKLDYSETFAENAKNNYLKLKETLDNLEFALKNVEDEPGPG 344
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFN 386
++ AL +D NT AI +L+R + ++ ++
Sbjct: 345 DLETLKTLPELENRFREALEDDFNTPKAITVFRELSRTANVYLETGKNMQVLEEIHALYK 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ LGI + + + + +LV+ER K+K + ++D IR++++S G+I++D K
Sbjct: 405 RFSDTLGI--FAKAGGEEVPGEVVRLVEEREEARKIKDWKTSDAIREKIKSLGYIVQDTK 462
Query: 447 NPDNGQR 453
++
Sbjct: 463 EGPKIKK 469
>gi|77463274|ref|YP_352778.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
gi|109894933|sp|Q3J2V7|SYC_RHOS4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|77387692|gb|ABA78877.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides 2.4.1]
Length = 499
Score = 332 bits (850), Expect = 9e-89, Method: Composition-based stats.
Identities = 195/491 (39%), Positives = 266/491 (54%), Gaps = 51/491 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R+ F+ ID N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3 EIRLTNTKSRRKEAFEPIDRKNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKI A + + I T + + + +D L L PT
Sbjct: 63 GHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+PRAT I MI +I+++I GHAYE ++F S +YG+ S R +D+ G RV
Sbjct: 123 HEPRATEWIGAMIAMIEDLIAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAMS LG FDIH GG+DL
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMSYELLGATFDIHAGGIDL 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQSCCA A +W+HN L ++GRKMSKS GNF T+ +LL+ +
Sbjct: 243 QFPHHENEIAQSCCAHPEGGFARVWMHNEMLLVDGRKMSKSLGNFFTVRDLLD------Q 296
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--GIIDPAVLSALYND 358
WP VIR+ L THY P+D+T ++ +A+ L W + G + V+ L +D
Sbjct: 297 GWPGEVIRMVYLGTHYGRPMDWTAEKAEQAKTTLRNWAEMVEGAAPGEVRAEVVDPLSDD 356
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV-------------CKEHLNKNI 405
LNT A+ AL L + SAH+LG+++ +E + +
Sbjct: 357 LNTAGALAALSDLYK-----RKDAAGLLGSAHLLGVDLQAIRHQPWARPYAFEELDGRFL 411
Query: 406 SIAIE----------------------KLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
I+ L+ L L + F +AD ++ G L
Sbjct: 412 REGIDYQPTVGVIGWGEITDQARETSIGLLHRWLALRRAGDFETADRLKTDAMRLGVELR 471
Query: 444 DYKNPDNGQRM 454
K+P+
Sbjct: 472 AQKSPNGVTGG 482
>gi|313682063|ref|YP_004059801.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
gi|313154923|gb|ADR33601.1| cysteinyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
Length = 465
Score = 332 bits (850), Expect = 9e-89, Method: Composition-based stats.
Identities = 163/480 (33%), Positives = 244/480 (50%), Gaps = 50/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+++++ +F+ + + +YVCGPTVYD AH+G+A+ +VFD+L R+L E
Sbjct: 1 MTIYDSVKKTKLKFEPLREGKVSLYVCGPTVYDDAHLGHAKSALVFDLLRRVLEAEDYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RNITDIDDKII +A++ + S I + T + +D + APT +P+
Sbjct: 60 -VLFARNITDIDDKIINKAQELGITT------SEIAERYTDAYHRDMAAIGVRAPTLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I M +IQ ++ GHAY +N +I FDTSS NY S S R+ E +
Sbjct: 113 ATESIDAMCDMIQKLLDKGHAYSISNGDIYFDTSSDKNYLSLSNRQSSENVSRVEKVGE- 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
K+N ADF LWK ++SP+GRGRPGWH+ECSAM Y+ DIHGGG
Sbjct: 172 -KRNEADFALWKAVHDEGVAFDSPFGRGRPGWHLECSAMIERYVTSNEGEYAIDIHGGGA 230
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ+ CA E A W+HNGF+ + G KMSKS GN + + L
Sbjct: 231 DLLFPHHENEAAQTRCATNHE-LAKYWMHNGFVTIAGEKMSKSLGNSFFLKDAL------ 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
+++ V+R +L THYR +F L ++ L + + T +
Sbjct: 284 -KAYDGEVLRFYLLSTHYRGDFNFNEDDLIASKRRLDRLYRLKKRIFGLSTDGIETEFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L AL +DLN A + +L ++ + D LL +LG
Sbjct: 343 NLLEALGDDLNVSRAYALIDELIAQANEALDTNPKDKAYRQILLSSLATVETVLGFGGQD 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + L++ I +L+ +R K K F+++D +R +L + G + D +
Sbjct: 403 PYEYFQFGLDEETKTKINELIAKRSEAKKAKDFAASDALRDELTALGVSIMDTPAGTVWE 462
>gi|315428011|dbj|BAJ49600.1| cysteinyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 475
Score = 332 bits (850), Expect = 9e-89, Method: Composition-based stats.
Identities = 166/486 (34%), Positives = 243/486 (50%), Gaps = 55/486 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKI+NT R + F+ P ++ MYVCGPTVYD AH+G+AR + FD + R L +
Sbjct: 1 MIKIFNTYSRSLEVFEPHIPGHVTMYVCGPTVYDVAHLGHARTYVAFDAVIRFLEFMGY- 59
Query: 64 KCVTYVRNITDI-------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V Y RN+TD+ +D++I A + + + K +F +D L
Sbjct: 60 -RVKYARNVTDVGHLRETGEDRMIVGAER------LRKHPMEVADKYMMEFFRDMDALGI 112
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
P QPRA+ HIP++I ++ ++ G+ Y + + FD S P+YG S K +E M
Sbjct: 113 RRPDIQPRASMHIPEIIEAVEKLVDKGYGYVIDGSVYFDISKFPDYGKLSNIKPEELLMH 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
R+ KK+PADF LWK S P P W++PWGRG PGWHIECS MS YLG+ DIHG
Sbjct: 173 -RIDPDPRKKHPADFALWKESPPSYPFSWKTPWGRGFPGWHIECSIMSMKYLGEQIDIHG 231
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG +LIFPHHENEIAQS + W+H G L + GR M KS GNFITI + L
Sbjct: 232 GGQELIFPHHENEIAQSEALTGKKPFVKYWMHTGELTVGGRGMHKSYGNFITIQDAL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+++P+ V+RL +L HYR P+D++ + + +A K + +I
Sbjct: 289 ----KTYPSDVLRLFILSAHYRTPLDYSEKSMEQAAENFDKITNFYENLSLIAEEDRAKP 344
Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFN 386
+ + A+ D NT +A+ ++ ++ D L +F
Sbjct: 345 RDPSLDELGDVFKQSFIEAMSEDFNTPNALAIVYDFMKKVNTRLDDIGHEQAAHLRQLFL 404
Query: 387 ASAHILGIEVCKEHLNKNIS--IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ LG+ E + ++ LV+ R L K + AD IR L +G ++ED
Sbjct: 405 ETCRALGLLQKIERRSSAAEVMEFVKTLVEVRRELRKRGMYDLADRIRNMLAERGIVVED 464
Query: 445 YKNPDN 450
K +
Sbjct: 465 TKEGER 470
>gi|260906618|ref|ZP_05914940.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
Length = 483
Score = 332 bits (850), Expect = 1e-88, Method: Composition-based stats.
Identities = 161/493 (32%), Positives = 233/493 (47%), Gaps = 65/493 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +YNT R E + ++ ++ +YVCG TV HIG+ R VFD L R L Y
Sbjct: 1 MTIALYNTASRTTDELRPVNAGHVGIYVCGATVQGEPHIGHLRSASVFDQLRRWLMYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ ++ +E K + F + L L P+++
Sbjct: 61 --SVTLVRNVTDIDDKILSKSAEEG------RPWFAHAFKYERAFTQAYAALDVLPPSYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HI +MI LI +I G+AY + ++ F +S +YG + +++++ +
Sbjct: 113 PRATGHITEMIELIDRLITAGYAYPALDDSGDVYFAATSWADYGELTNQRLEDMEPANDA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ KK+ DF LWK P EPG W +PWGRGRPGWHIECSAMS+ YLG+ FDIHGG
Sbjct: 173 DLR-GKKDARDFALWKAHKPGEPGTASWPAPWGRGRPGWHIECSAMSTKYLGENFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A ++ ANIW+H+G LN+ G KMSKS GN + +EL
Sbjct: 232 GLDLRFPHHENELAQSRAAG--DRFANIWMHSGLLNVGGDKMSKSLGNSVFASELFHR-- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
+ +R + YR ++F+ + + L +
Sbjct: 288 -----YSPLAVRFFLTGASYRSILEFSPEAMDRQTASLDRLANFLQRARQTLGEDAPALP 342
Query: 345 ----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPI 384
+ +AL +DL A+ + E K D ++
Sbjct: 343 EVSDGYSTRGVDVPAEFAAALDDDLGVPRALSVVFATVTEGAKLLDSGQDRSQLTQIVAE 402
Query: 385 FNASAHILGIEVCKEHLNK---------NISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
ILG+ E K + ++ L +R K F++AD IR L
Sbjct: 403 VELMLDILGVNPSAEAWAKSGTNATVETALDSLVDALASQRAAAKAEKDFATADAIRDSL 462
Query: 436 ESKGFILEDYKNP 448
S G ++ED +
Sbjct: 463 ASAGIVIEDTADG 475
>gi|224418544|ref|ZP_03656550.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|253826903|ref|ZP_04869788.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|313142072|ref|ZP_07804265.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|253510309|gb|EES88968.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|313131103|gb|EFR48720.1| cysteinyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
Length = 467
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 151/482 (31%), Positives = 240/482 (49%), Gaps = 47/482 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++KIY++++++ +F I+P +R+YVCGPTVYD +H+G+AR IVFD+L R+LR
Sbjct: 1 MQLKIYDSIKKEKVDFFPINPPKVRLYVCGPTVYDDSHLGHARSAIVFDLLRRILRENGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V + +N TDIDDKII ++ Q S+ + IT TQ+++ + L +
Sbjct: 61 E--VLFAKNFTDIDDKIINKSLQSGLSV------AEITQTYTQKYLDEMAALGVERADIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT + + +I+ ++ G AY+ N I+ + ++ E + +R+
Sbjct: 113 PKATESLESICAMIEKLLEKGFAYQTPNGDIYLSVEKDPQYGSLSGRVAELETQSRIQNS 172
Query: 183 YHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGG 237
K++ DF LWK + + G++SP+G+GRPGWHIECSAM +L DIHGGG
Sbjct: 173 EQKRDARDFALWKSYKGIGDIGYDSPFGKGRPGWHIECSAMIKKHLAYSGEYAIDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE +Q+ CAD + A WIHNGF+ + G KM+KS GN I + L
Sbjct: 233 ADLLFPHHENEASQTRCADN-QTIAKYWIHNGFVTINGEKMAKSLGNSFFIKDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQ-------RLTEAEILLSKWPQTSTSKG----I 346
+++ ++R +L THYR ++F + RL L +
Sbjct: 287 --KNYDGEILRFYLLGTHYRAGLNFAEEDLLTAKKRLDRIYRLKKRIYPIQKIDEGECCE 344
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------SAHILGIEVC 397
A L AL +DLN A+ + + ++ + D A +LGI
Sbjct: 345 FREAFLEALNDDLNVSKALSVVDEFVAKANELLDKKQKDKAPMIAGNLVIIERLLGIGSK 404
Query: 398 KEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
++ IE L+ +R K K ++ AD IR++L G + D
Sbjct: 405 NPFAYFQLGVSEEQKNEIETLIAKRNEAKKQKDYAEADKIREELRKMGIEIMDTFEGCVW 464
Query: 452 QR 453
++
Sbjct: 465 EK 466
>gi|329943176|ref|ZP_08291950.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
gi|313848330|emb|CBY17333.1| putative cysteinyl-tRNA synthetase [Chlamydophila psittaci RD1]
gi|328814723|gb|EGF84713.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci Cal10]
gi|328915014|gb|AEB55847.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
Length = 476
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 157/486 (32%), Positives = 237/486 (48%), Gaps = 52/486 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ + +YNT R F + +R+Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 8 RQNLYLYNTASRTKELFSPSNDP-VRLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +V NITD+DDK + A N ++ T+ Q F +D L L
Sbjct: 65 FGYSVKHVMNITDVDDKTLAGA------CKKNISLDTYTAPFIQAFFEDVATLNILPADT 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT++IPQM+ I+ ++ G AY + + F + P+YG S+ ++ + +RV
Sbjct: 119 YPRATHYIPQMLEAIRKLLDDGIAYTGQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSRVA 178
Query: 181 EKYHKKNP-ADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +DF+LWK WESP+G+GRPGWH+ECS M+ LG DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDKKRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAG 238
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D IFPHHENEIAQS + + W+H+ L ++G+KMSKS GNF T+ LL+
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------- 349
R + IR +L +HYR ++FT + L L + + P
Sbjct: 295 ---RGFSGEEIRYMLLQSHYRMQLNFTEEGLIACRQALKRLRDFISRLESPYPESATISE 351
Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNA 387
+A+ NDLN +A+ +L ++ D L I
Sbjct: 352 DIDRCGQLFLQDFSNAIANDLNIATALASLFDFIHQTNSLIDKSNFTQADSNYVLDIMKK 411
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ L I + +LV+ER + K K + AD +R Q+ S G+++ED K+
Sbjct: 412 IDTVLGVIPFTTSL--EIPSEVAQLVEEREVARKEKNWKQADVLRNQIASLGYVIEDTKS 469
Query: 448 PDNGQR 453
++
Sbjct: 470 GPKVKK 475
>gi|313114813|ref|ZP_07800313.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622868|gb|EFQ06323.1| cysteinyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 465
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 174/495 (35%), Positives = 250/495 (50%), Gaps = 77/495 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL R+ EF P R+YVCGPTVY++ HIGNARP+IVFD L R L Y
Sbjct: 1 MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV NITDIDDK+I++ ++E S + + + +++KD L C PT QPR
Sbjct: 59 KVFYVSNITDIDDKLIKKGQEEGTS------MKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
AT HI Q++ +++++I GHAY N ++ F S P YG S K+D+ + G R
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K++PADF +WK + P EP WESP+G GRPGWHIECSAMS +LGK D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS CA+ E A W+HNGF+N++ +KMSKS NF T+ ++ +
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDVADV----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
+ IR ML YR P+++TV + + L + +
Sbjct: 287 --YGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALTKDAFGTDETL 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHI 391
+A+ +DLNT A+ A+ L +E F+ +
Sbjct: 345 KEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAVSSKDALQTAAAAFDEITGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQ-------------ERLILLKMKKFSSADYIRKQLESK 438
LG+ ++ + + +LV+ D IR QL
Sbjct: 405 LGLLYNRKK--DEVPAEVTELVEKRAAAKKAKDWATA-------------DAIRAQLTEL 449
Query: 439 GFILEDYKNPDNGQR 453
G+ ++D +
Sbjct: 450 GWAVKDTAQGPQLSK 464
>gi|254450306|ref|ZP_05063743.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
gi|198264712|gb|EDY88982.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 238]
Length = 468
Score = 331 bits (849), Expect = 1e-88, Method: Composition-based stats.
Identities = 199/471 (42%), Positives = 265/471 (56%), Gaps = 34/471 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNT RK EF ID +N+RMYVCGPTVYD AH+GNARP+IVFD L+RLLRY YG
Sbjct: 1 MAIKLYNTKVRKKVEFSPIDENNVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRYTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
VTYVRN TD+DDKI A +Q + + + I+ + + +++D + L P
Sbjct: 61 ADHVTYVRNFTDVDDKINATALARQQAGAAGTLENLIAERSDETIGWYLEDMAAVGALEP 120
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
T PRAT +I QMI +I+++I HAYEA +F S YG+ S R +D+ G RV
Sbjct: 121 TEMPRATQYIAQMIAMIKDLIAKEHAYEAEGHALFRVRSYAEYGTLSGRSVDDMIAGARV 180
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+K++P DF+LWK S+ +PGW+SPWG GRPGWHIECSAM+ LG FDIHGGG D
Sbjct: 181 EVAPYKEDPMDFVLWKPSSDDQPGWDSPWGHGRPGWHIECSAMALDLLGDAFDIHGGGND 240
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS CA AN+W+HN L +EG+KMSKS GNF T+ +LL+
Sbjct: 241 LTFPHHENEIAQSTCAGHG--FANVWMHNEMLQVEGKKMSKSLGNFFTVRDLLK------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---SKGIIDPAVLSALY 356
+ P VIR ML THYR+P+++T ++ EAE L KW K I+ P + A+
Sbjct: 293 QGVPGQVIRFVMLSTHYRKPMNWTEKKRVEAERTLRKWFAAIRLSAPKAIVSPEFIKAVS 352
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE-------------HLNK 403
+DLN+ AI LH+ L A LGI + + +L
Sbjct: 353 DDLNSPQAIAVLHQHF-----AAGELDNLKAGLEFLGISIEFDLENIFYGNMDNLNYLTF 407
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+L+ R+ ++ FS D + L + G + K
Sbjct: 408 ADPEH--ELMNLRIDAMQSNDFSEVDRYKAMLMAAGAEVRMSKGKVEVIAG 456
>gi|291542167|emb|CBL15277.1| cysteinyl-tRNA synthetase [Ruminococcus bromii L2-63]
Length = 468
Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats.
Identities = 151/477 (31%), Positives = 224/477 (46%), Gaps = 47/477 (9%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+L + EF P + MY CGPTVY +AHIGN R I+ DVL + LR+ + V
Sbjct: 3 LYNSLGQTKQEFVPHTPGKVNMYTCGPTVYHYAHIGNLRTYIMEDVLEKYLRFSGYD--V 60
Query: 67 TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
V NITD+ +DK++ A++EH ++ I T F D +L
Sbjct: 61 NRVMNITDVGHLSSDADTGEDKMLSGAKREHKTV------MEIAKFYTDAFFADCEKLNI 114
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE--QK 174
P ATN I I +I ++ G+AY A + FDTS + NY F D+
Sbjct: 115 KRPDVVEPATNCIDDFINMISVLLEKGYAYIAGGNVYFDTSKLDNYYVFGNMNEDDLAVG 174
Query: 175 MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ V E +K+N ADF+LW + E WESPWG G PGWHIECS +S + G+
Sbjct: 175 VRDSVEEDENKRNKADFVLWFTKSKFDSQELKWESPWGVGYPGWHIECSCISYKHCGEYL 234
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+D FPHH NEIAQS K W H LN KMSKS G F+T++ L
Sbjct: 235 DIHCGGIDNAFPHHTNEIAQSEAFLG-HKWCPYWFHVLHLNDARGKMSKSKGGFLTVSLL 293
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------PQT 340
E + + V R+ L +HYR+P+ F+ L +K
Sbjct: 294 EE------KGYNPLVYRMFCLQSHYRKPLTFSYDNLDNTATAYNKLVKRISALSRDGEPD 347
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV---- 396
+ AL NDLNT A+ ++ + + + L + +L +++
Sbjct: 348 MAKAEELTKGFSEALDNDLNTSLALTCVYDVLKADADDATKLYVIGEFDKVLSLDLTKVP 407
Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K + + + +E+L+ +R K +++AD IR +L+ +++D K+
Sbjct: 408 ESNKADADDDFAKEVEELIAQRTKARAEKDWATADAIRDKLKEMKVVVKDTKDGIEW 464
>gi|269302721|gb|ACZ32821.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae LPCoLN]
Length = 474
Score = 331 bits (848), Expect = 2e-88, Method: Composition-based stats.
Identities = 160/491 (32%), Positives = 231/491 (47%), Gaps = 60/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ YNT +K F +R+Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 9 LYFYNTASQKKELFFPNHTP-VRLYTCGPTVYDYAHIGNFRTYVFEDILKRTL--VFFGY 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V NITD++DK I A N + T T+ F +D L P
Sbjct: 66 SVTHVMNITDVEDKTIAGA------SKKNIPLQEYTQPYTEAFFEDLDTLNIAKADFYPH 119
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT++IPQMI I ++ G AY + + F + PNYG S + + +R+
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179
Query: 184 HK-KNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ +NP+DF+LWK P G WESP+G+GRPGWH+ECS M+ LG DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
IFPHHENEIAQS + W+H+ L ++G+KMSKS GNF+T+ +LL
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFVRYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ + +R +L +HYR ++FT + L L + + +D
Sbjct: 293 QGFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
A AL NDLN + +L E D +L
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + I + +LV ER K K ++ AD +R ++ + GF++ED K+
Sbjct: 413 VLGVLPL--TTSVCIPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSGP- 469
Query: 451 GQRMTRWKQKP 461
K KP
Sbjct: 470 -------KVKP 473
>gi|332558152|ref|ZP_08412474.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
gi|332275864|gb|EGJ21179.1| cysteinyl-tRNA synthetase [Rhodobacter sphaeroides WS8N]
Length = 484
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 196/479 (40%), Positives = 270/479 (56%), Gaps = 41/479 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++ NT R+ F+ IDP N+R+YVCGPTVYD AH+GN RP++VFDVL+RLLR+ YGE
Sbjct: 3 EIRLTNTKSRRKEAFEPIDPGNVRLYVCGPTVYDRAHLGNGRPVVVFDVLFRLLRHVYGE 62
Query: 64 KCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRN TD+DDKI A + + I T + + + +D L L PT
Sbjct: 63 RHVTYVRNFTDVDDKINAAALARKDAGDPRSLEALIRERTDETIRWYHEDMDALGALRPT 122
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+PRAT I MI +I++++ GHAYE ++F S +YG+ S R +D+ G RV
Sbjct: 123 HEPRATEWIGAMIAMIEDLMAKGHAYEREGHVLFRVRSYRDYGALSGRSVDDMIAGARVE 182
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-------VFDI 233
K++P DF+LWK S PGW+SPWGRGRPGWHIECSAM+ L K FDI
Sbjct: 183 VAPFKEDPMDFVLWKPSDDELPGWDSPWGRGRPGWHIECSAMADGLLMKDLPENKRSFDI 242
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
H GG+DL FPHHENEIAQS CA A +W+HN L ++GRKMSKS GNF T+ +LL+
Sbjct: 243 HAGGIDLQFPHHENEIAQSRCAHPEGGFAKVWMHNEMLLVDGRKMSKSLGNFFTVRDLLD 302
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---PA 350
+ WP VIR+ L THY +P+D+T ++ +A+ L W + +
Sbjct: 303 ------QGWPGEVIRMVYLGTHYGKPMDWTAEKAEQAKATLEGWFNLTDGLEAEEISGER 356
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK--EHLNKNI--- 405
L L +DLNT AI ALH+LA EST A +LG+ + + I
Sbjct: 357 YLDELCDDLNTAGAIAALHRLASESTAGR-----LKAGMRLLGLPDAEHVNWWRREIVTL 411
Query: 406 ------------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ I L+Q L K++ AD +++ LE+ G + + K +
Sbjct: 412 FGTASSGSTPLYTVEIVPLLQRWQDLRLAKRYGEADALKRALENVGLRVTNGKRGPTAE 470
>gi|15806673|ref|NP_295393.1| cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
gi|6459435|gb|AAF11225.1|AE002009_5 cysteinyl-tRNA synthetase [Deinococcus radiodurans R1]
Length = 532
Score = 330 bits (847), Expect = 2e-88, Method: Composition-based stats.
Identities = 166/507 (32%), Positives = 240/507 (47%), Gaps = 72/507 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I +Y+T++R+ F P + MY+CGPTVY AH+G+A+ + FDV+ R L ++
Sbjct: 49 NPNITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFG 108
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YV NITD+ +DK+ RAR E + K F +D
Sbjct: 109 YQ--VRYVSNITDVGHLLNDADEGEDKLQARARLEQLE------PMEVADKYFWSFFRDM 160
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L L P+ PRAT HI + I LI+ +I GHAYE+ + FD S P YG S RK+D
Sbjct: 161 DALNVLRPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLD 220
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+Q+ GTR + K++P DF LWK++ P W+SPW G PGWHIECSAMS YLG+
Sbjct: 221 DQEEGTREAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEG 280
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGGLDL FPHHE EIAQ+ A A W+HN L + G KMSKS GNF TI +
Sbjct: 281 FDIHGGGLDLQFPHHEAEIAQAEAAGHH--FARYWMHNNMLTIGGEKMSKSKGNFTTIQD 338
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----- 345
+L + + V+R ++ +HYR + + A + +T
Sbjct: 339 IL-------KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKD 391
Query: 346 --------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
A+ +D NT A+ +L L E +
Sbjct: 392 APAGSDTALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLER 451
Query: 381 LLPIFNAS-AHILGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + +LG+ + I ++ +++ R K+++ AD +R
Sbjct: 452 ARDAYRSLGGDVLGLFAETGSAASVAQDDASVIDALMDLVLKARQNYRLQKQYAEADELR 511
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ L G +ED K+ RWK+
Sbjct: 512 ETLGKAGITVEDTKDGA------RWKR 532
>gi|254437047|ref|ZP_05050541.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
gi|198252493|gb|EDY76807.1| cysteinyl-tRNA synthetase [Octadecabacter antarcticus 307]
Length = 481
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 204/471 (43%), Positives = 273/471 (57%), Gaps = 33/471 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IK+YNT RK EF ID ++RMYVCGPTVYD AH+GNARP+IVFD L+RLLR+ YG
Sbjct: 1 MAIKLYNTKVRKKVEFSPIDHKDVRMYVCGPTVYDRAHLGNARPVIVFDTLFRLLRHTYG 60
Query: 63 EKCVTYVRNITDIDDKIIERA---RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
VTYVRN TD+DDKI A +Q + + D I+ +S+ +++D + L P
Sbjct: 61 ADHVTYVRNFTDVDDKINATAFARQQAGAAGTLEDLIAERSSETIGWYLEDMAAVGALEP 120
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+ PRAT +I QMI +I+++I GHAYEA +F S YG+ S R +D+ G RV
Sbjct: 121 SAMPRATQYIAQMITMIEDLIAKGHAYEAEGHALFRVRSYTEYGALSGRSVDDMIAGARV 180
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+K++P DF+LWK S+ ++PGW+SPWGRGRPGWHIECSAM+ LG FDIHGGG D
Sbjct: 181 EVAPYKEDPMDFVLWKPSSDVQPGWDSPWGRGRPGWHIECSAMALDLLGGEFDIHGGGND 240
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS CA AN+W+HN L +EGRKMSKS GNF T+ +LLE
Sbjct: 241 LQFPHHENEIAQSTCAGHG--FANVWMHNEMLQVEGRKMSKSLGNFFTVRDLLE------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------SKGIIDPAVL 352
+ P VIR ML THYR+P+D+T ++ AE L W + D +L
Sbjct: 293 QGVPGEVIRFVMLSTHYRKPMDWTAAKVQFAEKTLIGWRTATMELTPTAAPDFTADKEIL 352
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI--EVCKEHLNK 403
+AL +DLNT I L+ L + D L F A+ + G+ + N
Sbjct: 353 AALSDDLNTHLMISKLNALRPKPQMLLDNARFVGFLSDEFRAAREVHGLPSGQYSDFDNI 412
Query: 404 NISIAI------EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+++ I +K+ + R L+ K FS+ D I+ + G + K
Sbjct: 413 DLNAPIHLHLLNDKITEIRATALQTKNFSALDEIKNKAAEAGIEVRMSKVG 463
>gi|261337996|ref|ZP_05965880.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
gi|270277500|gb|EFA23354.1| cysteine--tRNA ligase [Bifidobacterium gallicum DSM 20093]
Length = 550
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 155/527 (29%), Positives = 228/527 (43%), Gaps = 96/527 (18%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+Y+T +++F+ I P + +YVCG TV HIG+ R + FD++ R +
Sbjct: 39 DLKLYDTASHTVSQFEPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDIIRRWFERLGYQ 98
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI++++ ++F K L PT++P
Sbjct: 99 --VTFVRNVTDIDDKILDKSAAAG------QQWWQRAYLYEREFTKAYDELGVEPPTYEP 150
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT H+ M+ LIQ II +GHAY + FD +S P+YG + +K E
Sbjct: 151 RATGHMMDMVALIQRIIDNGHAYVVRDEQGNPTGNVYFDVASWPHYGELTHQKQSEPGAQ 210
Query: 177 ---------------------------------TRVPEKYHKKNPADFILWKRSTPMEP- 202
K +P DF LWK +P
Sbjct: 211 IDAVDVELDEAARVADAMGPSVDTAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDTDPV 270
Query: 203 --GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
W +P+G GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ CA +
Sbjct: 271 DARWHTPFGEGRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQT-CAAGYDS 329
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
A W+H+ ++ +G KMSKS GN +++ +L PA V+R A+ YR +
Sbjct: 330 AAR-WMHSAWVTAKGEKMSKSLGNGLSVPVVLAEH-------PAWVVRYALGGVQYRSML 381
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGII------------------DPAVLSALYNDLNTV 362
+++ Q L EA + + + +A+ D+N
Sbjct: 382 EWSDQTLAEATAAYERVTNFISRAEDVLGEQIDRDQIVAVGADDLPIDFTNAMNEDINVS 441
Query: 363 SAIQALHKLARESTKNHDL----------LPIFNASAHILGIEVCKEHL--------NKN 404
A+ A+ R D L A LG++ E N+
Sbjct: 442 GALAAIFTAIRNGNALMDANADAAQVRESLLQVRAMLDTLGLDPEAEPWAQETSNAANEV 501
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ I ++ R K K F++AD IR L + G +ED
Sbjct: 502 LDRLIATQLEARAEARKAKDFATADAIRDALAAAGITIEDTPQGPTW 548
>gi|15827087|ref|NP_301350.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
gi|221229565|ref|YP_002502981.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
gi|13431898|sp|P57990|SYC_MYCLE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|254781687|sp|B8ZUA9|SYC_MYCLB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|13092635|emb|CAC29831.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae]
gi|219932672|emb|CAR70416.1| putative cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
Length = 473
Score = 330 bits (846), Expect = 3e-88, Method: Composition-based stats.
Identities = 153/475 (32%), Positives = 230/475 (48%), Gaps = 46/475 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T+ + +F + ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 7 LRLHDTVAGAVRDFVPLRAGHVSIYLCGATVQGQPHIGHVRSGVAFDILRRWLMARGYD- 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + + F L L P+ +PR
Sbjct: 66 -VAFIRNVTDIDDKILNKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEPR 118
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QMI LI+ +I GHAY +++ FD S P+YG S K+D G V
Sbjct: 119 ATGHITQMIELIELLIETGHAYTGGSDVYFDVLSYPDYGQLSGHKMDYIHQGEGVTTG-- 176
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FPH
Sbjct: 177 KRDQRDFTLWKGAKSGEPSWPTPWGRGRPGWHLECSAMARAYLGSEFDIHCGGMDLVFPH 236
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 237 HENEIAQSRAVGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSIPAVLQRVR-------P 287
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT---------EAEILLSKWPQTSTSKGIIDPAVLSAL 355
+R + HYR ++F+ L E + + + G + P +AL
Sbjct: 288 AELRYYLGSAHYRSMLEFSEAALQDAVKAYVGVENFLTRVRTRVGAVGTGELTPRFAAAL 347
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNIS 406
+DL A+ +H E + D+ A ILG + E
Sbjct: 348 DDDLAVPIALAEVHHARVEGNRALDIGDHEGALTNAGAIRAMMGILGCDPLDERWESRDE 407
Query: 407 -----IAIEKLVQE----RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
A++ LV R + + + + AD IR +L+ G + D N +
Sbjct: 408 TSAALAAVDVLVAAELESRQMAREQRNWVLADQIRDRLKDAGIEVTDTVNGPQWE 462
>gi|260549524|ref|ZP_05823742.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|260407317|gb|EEX00792.1| cysteinyl-tRNA synthetase [Acinetobacter sp. RUH2624]
Length = 473
Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats.
Identities = 180/499 (36%), Positives = 257/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWKR+ EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKRAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQGFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + + IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------AIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|22299370|ref|NP_682617.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|22295553|dbj|BAC09379.1| cysteinyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 463
Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats.
Identities = 157/479 (32%), Positives = 231/479 (48%), Gaps = 64/479 (13%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
+Y CG TVYD+ H+G+AR + +DVL R L + V YV+N TDIDDKI+ RA +
Sbjct: 2 TIYACGVTVYDYCHLGHARSYVAWDVLRRYLTFLGY--TVHYVQNFTDIDDKILRRAYEN 59
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ ++ ++ + + +D L L + PRAT IP++I LIQ ++ G+AY
Sbjct: 60 G------ETMATVSDRYIAAYHQDMAALNILPASAYPRATEVIPEIINLIQGLLDRGYAY 113
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY----HKKNPADFILWKRSTPMEP 202
A ++ + + P+YG S R++++ G + K++P DF LWK + P E
Sbjct: 114 VAGGDVYYAVAQFPSYGKLSGRQLEQLMAGASGRIEEEEEQRKRHPLDFALWKAAKPEEM 173
Query: 203 G----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
WE+PWG+GRPGWHIECSAM G DIH GG+DLIFPHHENEIAQS
Sbjct: 174 SVYHPWEAPWGKGRPGWHIECSAMVRQAFGATVDIHCGGMDLIFPHHENEIAQSEAVT-Q 232
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
+ A W+HNGF+ + KMSKS GNF TI +LL + +RL +L YR+
Sbjct: 233 QPLARFWLHNGFVTVNTEKMSKSLGNFTTIRDLLA------QGLDPMALRLLVLQAQYRK 286
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------PAVLSALYNDLNTVS 363
P+DFT + LT A + I A A+ DLNT +
Sbjct: 287 PLDFTPEALTAAAKGWQTLGEALHLHQQIPLPPIDAAEVRSHPKTEAFCQAMDEDLNTAA 346
Query: 364 AIQALHKLARESTKNHDLL-----------------PIFNASAHILGIEVCKEH----LN 402
A+ + +LA+ + A +LG+E +E
Sbjct: 347 ALAVIFELAKTLNREQHRYLHGGGWGRSPAEVSRDWHTLVTLAQVLGLEAKEESNPALTV 406
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
+ I+ L+ R + K ++ +D +R L ++G L D K+ T W + P
Sbjct: 407 ELTDEEIQALIAARTAARQAKNYTESDRLRDLLLAQGVKLVDQKDGT-----THWFRVP 460
>gi|168067577|ref|XP_001785689.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162662678|gb|EDQ49502.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 491
Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats.
Identities = 170/497 (34%), Positives = 251/497 (50%), Gaps = 75/497 (15%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
++++ FQ I P + MYVCG T YD++HIG+AR + FDVL+R L+ + VTYVR
Sbjct: 1 MKKQKEVFQPIVPGKVSMYVCGVTTYDYSHIGHARVYVAFDVLFRYLKSVGYD--VTYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TDIDDKII+RA + + + ++ + +F D L CL P +PR ++HIP
Sbjct: 59 NFTDIDDKIIKRANE------VGEDPLNLSRRFCDEFQVDMELLRCLPPNVEPRVSDHIP 112
Query: 131 QMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
Q+I +I II + + Y ++ F+ ++P YG S RK +E + G RV K+NPA
Sbjct: 113 QIIKMISQIIENKNGYVMEGGDVYFEVDTLPTYGCLSGRKQEENRAGERVLVDNRKRNPA 172
Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
DF LWK + P EP W+SPWG GRPGWHIECSAMS+ +LG FDIHGGG+DLIFPHHENEI
Sbjct: 173 DFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMSAEHLGHKFDIHGGGMDLIFPHHENEI 232
Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
AQSC A + W+HNGF+ ++ KMSKS GNF TI E+LE + +R
Sbjct: 233 AQSCAAC-ADSRVGYWLHNGFVTVDNEKMSKSVGNFFTIREVLEL-------YHPLALRW 284
Query: 310 AMLMTHYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKG 345
+L THYR P++++ ++L + + +
Sbjct: 285 FLLGTHYRAPVNYSKRQLEVASDRVFYIFQTLVDCEQILSQQVDKVAACNPSKEAIELVK 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAREST----------------KNHDLLPIFNASA 389
I +++ +DLNT + + + + L+
Sbjct: 345 SIKNTFRTSMADDLNTPVVVASFSESFKFMNDLMHTRKGRKDKTRLVSLQLLITEIQEVM 404
Query: 390 HILGIEVCKEHLNKNISIAIEKL---------------VQERLILLKMKKFSSADYIRKQ 434
++LG ++ +K + I L +QER + K ++ +D IR +
Sbjct: 405 NVLGFQI--PSYSKVLD-EIRALALKRAGMSMNDLAARLQERASAREAKDYARSDQIRLE 461
Query: 435 LESKGFILEDYKNPDNG 451
L + G L D +
Sbjct: 462 LAAAGIGLMDGGDGTLW 478
>gi|33242297|ref|NP_877238.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
gi|33236808|gb|AAP98895.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae TW-183]
Length = 474
Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats.
Identities = 160/491 (32%), Positives = 232/491 (47%), Gaps = 60/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ YNT +K F +R+Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 9 LYFYNTASQKKELFFPNHTP-VRLYTCGPTVYDYAHIGNFRTYVFEDILKRTL--VFFGY 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V NITD++DK I A N + T T+ F +D L P
Sbjct: 66 SVTHVMNITDVEDKTIAGA------SKKNIPLQEYTQPYTEAFFEDLDTLNIARADFYPH 119
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT++IPQMI I ++ G AY + + F + PNYG S + + +R+
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179
Query: 184 HK-KNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ +NP+DF+LWK P G WESP+G+GRPGWH+ECS M+ LG DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
IFPHHENEIAQS + A W+H+ L ++G+KMSKS GNF+T+ +LL
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ + +R +L +HYR ++FT + L L + + +D
Sbjct: 293 QEFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
A AL NDLN + +L E D +L
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + I + +LV ER K K ++ AD +R ++ + GF++ED K+
Sbjct: 413 VLGVLPL--TTSVCIPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSGP- 469
Query: 451 GQRMTRWKQKP 461
+ KP
Sbjct: 470 -------RVKP 473
>gi|194476516|ref|YP_002048695.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
gi|171191523|gb|ACB42485.1| cysteinyl-tRNA synthetase [Paulinella chromatophora]
Length = 510
Score = 330 bits (845), Expect = 4e-88, Method: Composition-based stats.
Identities = 175/527 (33%), Positives = 236/527 (44%), Gaps = 92/527 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K NTL R++ F I I +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLKFTNTLTRQLESFTPIKDRKISIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+N TDIDDKI+ RA +E S+ + ++ +N + F D L L
Sbjct: 61 E--VTFVQNFTDIDDKILVRAAREESSMQL------VSDRNIEAFKSDMALLNILPADRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
PRAT + + +I ++ G AY ++ F YG S + + + +
Sbjct: 113 PRATKCLDGIRSIISDLEKKGVAYSTEGDVYFSIKEYAQYGKLSGKDLSKLQEGASGRIS 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ KKN DF LWK++ EP + SPWG GRPGWHIECS M LG+ DIH GG
Sbjct: 173 ASEEVRKKNSFDFALWKKAKIDEPSFTSPWGLGRPGWHIECSTMVREELGETIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A+ + AN W+HNG +N+ G+KMSKS GNF TI ELL +
Sbjct: 233 DLIFPHHENEIAQSEMANG-KNLANYWLHNGMVNVNGQKMSKSLGNFTTIRELLAS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------------ 334
+RL +L THYR+P+DF + L A I
Sbjct: 288 --GISPLALRLFVLQTHYRKPLDFNSEALKAASIGWANLNIALSLGERFKKNLQWDLGEF 345
Query: 335 --------------------SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
K + + ++A+ DLNT +AI L KLA+
Sbjct: 346 TKLYVLLMNKEDESSQKKLKPKLIEIMDPLKLAYQNFITAMDEDLNTSAAIAILFKLAKP 405
Query: 375 STKNHDLLP----------------------IFNASAHILGI--EVCKEHLNKNISIAIE 410
+ L + A ILG+ E E S I
Sbjct: 406 LRSLSNRLERGEIINSNSKTVLFEELQCQWQLLIGLASILGLRAERLGEKHTSLSSNDIT 465
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ R K F +AD IR L+ KG L D +T W
Sbjct: 466 VQIKLRNESKAKKDFLTADRIRDFLKDKGIELIDKPG-----NITEW 507
>gi|15618841|ref|NP_225127.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae CWL029]
gi|15836465|ref|NP_300989.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae J138]
gi|16752101|ref|NP_445468.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
gi|6831686|sp|Q9Z6X4|SYC_CHLPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|4377255|gb|AAD19070.1| Cysteinyl tRNA Synthetase [Chlamydophila pneumoniae CWL029]
gi|7189843|gb|AAF38714.1| cysteinyl-tRNA synthetase [Chlamydophila pneumoniae AR39]
gi|8979306|dbj|BAA99140.1| cysteinyl tRNA synthetase [Chlamydophila pneumoniae J138]
Length = 474
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 161/491 (32%), Positives = 232/491 (47%), Gaps = 60/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ YNT +K F +R+Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 9 LYFYNTASQKKELFFPNHTP-VRLYTCGPTVYDYAHIGNFRTYVFEDILKRTL--VFFGY 65
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V NITD++DK I A N + T T+ F +D L P
Sbjct: 66 SVTHVMNITDVEDKTIAGA------SKKNIPLQEYTQPYTEAFFEDLDTLNIARADFYPH 119
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT++IPQMI I ++ G AY + + F + PNYG S + + +R+
Sbjct: 120 ATHYIPQMIQAITKLLEQGIAYIGQDASVYFSLNRFPNYGKLSHLDLSSLRCCSRISADE 179
Query: 184 HK-KNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ +NP+DF+LWK P G WESP+G+GRPGWH+ECS M+ LG DIH GG+D
Sbjct: 180 YDKENPSDFVLWKAYNPERDGVIYWESPFGKGRPGWHLECSIMAMELLGDSLDIHAGGVD 239
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
IFPHHENEIAQS + A W+H+ L ++G+KMSKS GNF+T+ +LL
Sbjct: 240 NIFPHHENEIAQSEALSG-KPFARYWLHSEHLLIDGKKMSKSLGNFLTLRDLLH------ 292
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ + +R +L +HYR ++FT + L L + + +D
Sbjct: 293 QEFTGQEVRYMLLQSHYRTQLNFTEEALLACRHALRRLKDFVSRLEGVDLPGESPLPRTL 352
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
A AL NDLN + +L E D +L
Sbjct: 353 DSSSQFIEAFSRALANDLNVSTGFASLFDFVHEINTLIDQGHFSKADSLYILDTLKKVDT 412
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + I + +LV ER K K ++ AD +R ++ + GF++ED K+
Sbjct: 413 VLGVLPL--TTSVCIPETVMQLVAEREEARKTKNWAMADTLRDEILAAGFLVEDSKSGP- 469
Query: 451 GQRMTRWKQKP 461
K KP
Sbjct: 470 -------KVKP 473
>gi|91784175|ref|YP_559381.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|123358667|sp|Q13X60|SYC_BURXL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|91688129|gb|ABE31329.1| cysteinyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 465
Score = 329 bits (844), Expect = 4e-88, Method: Composition-based stats.
Identities = 168/500 (33%), Positives = 245/500 (49%), Gaps = 77/500 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLQDGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + + +D L P
Sbjct: 60 GY--NVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIKALHEDADALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + NYG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIERLEANGYAYQASDGDVNYAVRKFANYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK++ P EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKQDPLDFVLWKQAKPQEPADTGWDSKYGRGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N W+HNG++ ++ KMSKS NF TI E+L
Sbjct: 232 GQDLQFPHHENEIAQSEAATG-QTFVNFWMHNGYVQIDNEKMSKSLNNFFTIREVLA--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGI 346
+ A V+R + HYR P++++ + +A L++
Sbjct: 288 ----QYDAEVVRFFIARAHYRSPLNYSDVHIDDARNALTRLYTALKDVTPDGAELDWNEA 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILGIEVCKE----- 399
+A+ +D NT A+ L +LA E + D L ++G+ +
Sbjct: 344 YAQRFQAAMNDDFNTPVAVSVLFELASEVNRTRDPALARQLRLLGAVIGLLGREPRAYLQ 403
Query: 400 --------------------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
A + +R IR +L G
Sbjct: 404 QAAGAAAVGALEAAAIEAKIAARAAAKQAKDFAAADR--------------IRSELLEAG 449
Query: 440 FILEDYKNPDNGQRMTRWKQ 459
LED T W++
Sbjct: 450 VALEDKPGGL-----TEWRR 464
>gi|134281981|ref|ZP_01768687.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|134246510|gb|EBA46598.1| cysteinyl-tRNA synthetase [Burkholderia pseudomallei 305]
Length = 444
Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats.
Identities = 183/457 (40%), Positives = 243/457 (53%), Gaps = 44/457 (9%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++AHIGNARP +VFDVL RLLR+ Y V Y RN TD+DDKI A
Sbjct: 1 MYVCGPTVYNYAHIGNARPAVVFDVLSRLLRHDY--PQVVYARNFTDVDDKINAAA---- 54
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I IT + + D L L+P +PR T HIP +I LI+ ++ GHAY
Sbjct: 55 --VAAGVPIGTITDRYIDAYHADMQALGVLSPELEPRVTEHIPAIIELIETLLARGHAYV 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
++F S P YG S R+ ++ G RV +K++P DF+LWK STP PGW+SP
Sbjct: 113 VQGHVLFHVPSYPEYGHLSGRRTEDMLAGARVEVAPYKRDPLDFVLWKPSTPDLPGWDSP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WGRGRPGWH+ECSAM +LG DIHGGG DLIFPHHENEIAQ CA W+H
Sbjct: 173 WGRGRPGWHVECSAMIGQHLGHTIDIHGGGQDLIFPHHENEIAQGTCAHGT-LYCRTWVH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
N F+ ++G+KMSKS GN + + +LL P IRLA+L THYR P+D+ QRL
Sbjct: 232 NSFVTVDGQKMSKSLGNVLLVRDLLAQA-------PGEAIRLALLSTHYRRPLDWNAQRL 284
Query: 328 TEAEILLSKWPQTSTSKGII--------DPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ A L+++ ++ + + DP +L AL NDLN A+ LH L
Sbjct: 285 SAARQTLTRYYESLSKVAQVAVVPQIAADPQLLEALRNDLNVPGALVRLHVLLTVLDDAD 344
Query: 380 D------LLPIFNASAHILGIEVCKEHL--------------NKNISIAIEKLVQERLIL 419
SA +LG+ I+ L+ ER
Sbjct: 345 TDAERAHAKSALLTSAALLGLLQQPPQAALAQLRPAAPATAVQGLGDTRIKALLAEREQA 404
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + F+ AD +R+ LE+ GF +ED + T+
Sbjct: 405 RRDRDFAKADALRETLEAAGFTIEDTPAGSVLRPATK 441
>gi|160943774|ref|ZP_02091005.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
M21/2]
gi|158444948|gb|EDP21951.1| hypothetical protein FAEPRAM212_01272 [Faecalibacterium prausnitzii
M21/2]
gi|295104011|emb|CBL01555.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
Length = 465
Score = 329 bits (844), Expect = 5e-88, Method: Composition-based stats.
Identities = 175/495 (35%), Positives = 249/495 (50%), Gaps = 77/495 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL R+ EF P R+YVCGPTVY++ HIGNARP+IVFD L R L Y
Sbjct: 1 MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV NITDIDDK+I++ ++E S + + + +++KD L C PT QPR
Sbjct: 59 KVIYVSNITDIDDKLIKKGQEEGTS------MKEVAQRFEAEYLKDAAGLNCEKPTVQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
AT HIPQ++ +++++I GHAY N ++ F S P YG S +D+ + G R
Sbjct: 113 ATEHIPQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPGYGKLSHLNLDDLESGNRELRSR 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K++PADF +WK + P EP WESP+G GRPGWHIECSAMS +LGK D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS CA+ E A W+HNGF+N++ +KMSKS NF T+ ++
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDV-------A 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
+ IR ML YR P+++TV + + L + +
Sbjct: 285 NLYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTDFGTDETL 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHI 391
+A+ +DLNT A+ A+ L +E F+ +
Sbjct: 345 KEKAAEARTKFCTAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALETAAAAFDEITGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQ-------------ERLILLKMKKFSSADYIRKQLESK 438
LG+ ++ + + +LV+ D IR QL
Sbjct: 405 LGLLYNRKK--DEVPAEVTELVEKRAAAKKAKDWATA-------------DAIRAQLTEL 449
Query: 439 GFILEDYKNPDNGQR 453
G+ ++D +
Sbjct: 450 GWAVKDTAQGPQLSK 464
>gi|261350960|ref|ZP_05976377.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
gi|288860300|gb|EFC92598.1| cysteine--tRNA ligase [Methanobrevibacter smithii DSM 2374]
Length = 448
Score = 329 bits (844), Expect = 6e-88, Method: Composition-based stats.
Identities = 168/466 (36%), Positives = 237/466 (50%), Gaps = 44/466 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+TL R F+ ++ + I ++VCGPTVYD AHIG+ R I FD + R Y
Sbjct: 1 MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII+R+++ I K +++++D +L R
Sbjct: 59 TVFYIQNITDVDDKIIKRSKETGI------PAGDIARKFEKRYIEDMNKLNVTGVNLFAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+H+ ++I IQ +I G AYE + + F + +G S R I+E + + K
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171
Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+ EP W SPWG GRPGWHIE +A++ +Y G +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EI Q W+H GFLN+ G KMSKS NFITI ELL + +
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
A V R +L THYR PIDF+ + L ++E L K + S I
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
++ +D NT AI A+ L +S D L + ILGI+ +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDF--D 402
Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
+ S + L+ R L K++ +D IR QL G+ + D
Sbjct: 403 LKDSGSSDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448
>gi|312144267|ref|YP_003995713.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
gi|311904918|gb|ADQ15359.1| cysteinyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
Length = 484
Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats.
Identities = 180/499 (36%), Positives = 245/499 (49%), Gaps = 67/499 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL K +F+ ++P +RMYVCG TV +++HIG+ R I +DV+ R L Y E
Sbjct: 1 MLKVYNTLNNKKEKFETVEPGLVRMYVCGLTVQNYSHIGHIRSAINYDVIRRYLEYSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TDI++KI++RA +E + + + K F++D A
Sbjct: 61 --VEYISNFTDINEKIVKRAEEEGMTA------AELADKYANAFLEDIRSFNIKAADQYL 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +I ++I ++ +I G+AYE N ++ F S +YG S R I++ + G R+
Sbjct: 113 RVSENIDEIIEMVSKLIEKGYAYEINGDVYFSVDSFEDYGKLSGRSIEDMQAGARIAVNE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+ E GW+SPWG G PGWHIECSAMS LG FDIHGGG+DLIFP
Sbjct: 173 DKKNPLDFALWKKVEAGE-GWDSPWGEGWPGWHIECSAMSMKRLGATFDIHGGGVDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS +K W+HNG +NL G KMSKS GNF T E+L + +
Sbjct: 232 HHENEIAQSEAYSG-QKFVKYWLHNGTVNLSGEKMSKSQGNFFTSREVL-------KEFS 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------ 345
A VIR +L HYR PIDF+ ++L EA+ L + T
Sbjct: 284 AQVIRYFLLTRHYRSPIDFSYEKLEEAQTSLQRLTNTRQELAKVLSGDIESSTGDRLDKD 343
Query: 346 ------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--------------- 384
I AL +D NT AI LH E +
Sbjct: 344 FLKKTKEIRAEFKKALDDDFNTAEAIGVLHDFVGEINSYINRSEFTLNEKNFSVLEESEE 403
Query: 385 -FNASAHILGIEVCKEHLNKNISIAI----EKLVQERLILLKMKKFSSADYIRKQLESKG 439
F A ILG++ E + E L++ R + ADYIR QL+ G
Sbjct: 404 LFLELADILGLKFSVEKSKTKNDGFVEPLIELLLELRQKARDKNDWEEADYIRDQLKEIG 463
Query: 440 FILEDYKNPDNGQRMTRWK 458
+ D QR T W+
Sbjct: 464 IEVIDT------QRGTEWE 476
>gi|229067855|ref|ZP_04201172.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
gi|229188375|ref|ZP_04315423.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228595049|gb|EEK52820.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228715214|gb|EEL67073.1| Cysteinyl-tRNA synthetase [Bacillus cereus F65185]
Length = 440
Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats.
Identities = 164/464 (35%), Positives = 234/464 (50%), Gaps = 57/464 (12%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNARP +VFD + R L Y + V YV N TD+DDK+I+ A +
Sbjct: 1 MYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+P I + + + +D T L C T PR T ++ +I IQ ++ G+AYE
Sbjct: 59 EDVPT------IADRFVEAYFEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ ++ F T YG S + I + + G R+ K++P DF LWK + E WESP
Sbjct: 113 SEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ YLG DIH GG DL FPHHENEIAQS + A W+H
Sbjct: 173 WGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG++N+ KMSKS GNFI +++++ + + +IR ML HYR PI+F+ + L
Sbjct: 232 NGYININNEKMSKSLGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELL 284
Query: 328 TEAEILLSKWPQTS------------------TSKGIIDPA---VLSALYNDLNTVSAIQ 366
L + I+ A+ +D NT +AI
Sbjct: 285 QSTNNGLERIKTAYGNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAIT 344
Query: 367 ALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
L+ +A + + + ILG+E+ KE L + Q+
Sbjct: 345 ELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QK 401
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R+ K + F+ +D IR L+ + ILED + TRWK+
Sbjct: 402 RIEARKNRDFALSDQIRDDLKERNIILEDT------AQGTRWKR 439
>gi|184157544|ref|YP_001845883.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|332874278|ref|ZP_08442197.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|187631665|sp|A3M419|SYC_ACIBT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558609|sp|B2HX34|SYC_ACIBC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|183209138|gb|ACC56536.1| Cysteinyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|193076930|gb|ABO11663.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
gi|322507858|gb|ADX03312.1| cysS [Acinetobacter baumannii 1656-2]
gi|323517455|gb|ADX91836.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
gi|332737503|gb|EGJ68411.1| cysteine--tRNA ligase [Acinetobacter baumannii 6014059]
Length = 473
Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats.
Identities = 178/499 (35%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+++ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + ++ IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|293606585|ref|ZP_06688941.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
gi|292814970|gb|EFF74095.1| cysteinyl-tRNA synthetase [Achromobacter piechaudii ATCC 43553]
Length = 484
Score = 329 bits (843), Expect = 6e-88, Method: Composition-based stats.
Identities = 170/502 (33%), Positives = 240/502 (47%), Gaps = 65/502 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R F+ +RMYVCG TVYDF H+G+AR ++ FDV+ R LR
Sbjct: 1 MLQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L +P +P
Sbjct: 59 LAVDYVRNITDIDDKIIRRAVETS------RRIGDVTDFYIAAMHADEQALGVESPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + +G AY+ + ++ + P YG S + +D+ + G RV
Sbjct: 113 RATQYVGEMLDIIGKLEQNGLAYQADDGDVNYAVRGFPGYGKLSGKTLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SSKRDPLDFVLWKSAKADEPADTKWESPYGMGRPGWHIECSAMSKSLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL------- 292
L FPHHENEIAQ+ A ANIW+H G L ++ KMSKS GNF TI + +
Sbjct: 233 LKFPHHENEIAQTEGAFG-GTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTVALGEPAA 291
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
+ + A ++R ++ HYR ++T L +A+ L + Q
Sbjct: 292 DDANYRVNPREAEMVRFFIVRNHYRSSQNYTPDNLVDAQNALDRLYQALQNVPADDQGID 351
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEH 400
A +A+ +D N+ A+ AL +LA E+ ++ A A +LG+
Sbjct: 352 WNEPQAQAFKAAMDDDFNSSGAVAALFELASEANRSKSARAAGQLRALAAVLGLLQQDPA 411
Query: 401 LNKNIS-----IAIEKLVQERLILLKMKKFS------------------SADYIRKQLES 437
AIE+ +R L + AD IR +L
Sbjct: 412 AYFQSPTRYSAAAIEQ--GQRATLDAA---AIQTLIDARAAAKAARDFAEADRIRAELRD 466
Query: 438 KGFILEDYKNPDNGQRMTRWKQ 459
G L+D T+W++
Sbjct: 467 AGIELDDKPGGL-----TQWRR 483
>gi|159040150|ref|YP_001539403.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
gi|157918985|gb|ABW00413.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
Length = 471
Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats.
Identities = 160/485 (32%), Positives = 232/485 (47%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +F + + +Y+CG T+ HIG+ R + +DVL R L +
Sbjct: 1 MTLRLYDTATRSVRDFVPREAGKVGVYLCGLTLQAPPHIGHLRSGVNYDVLRRWLLAHGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V ++RN+TDIDDKI+ +A + + I N + L L+PT++
Sbjct: 61 E--VRFIRNLTDIDDKILVKAVE------GDLPYWSIAYANELKLTAAYRALNVLSPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HIP+M LI +I GHAY A + ++ FD S P YG+ S + + +
Sbjct: 113 PRATGHIPEMQQLIAKLIDTGHAYPAADGSGDVYFDVLSWPAYGTLSNQSPTDMQ-PAGD 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF LWK P EP W SPWGRGRPGWHIECSAM YLG FDIHGG
Sbjct: 172 APDRCKRDPRDFALWKGVKPGEPADAYWPSPWGRGRPGWHIECSAMCWRYLGAEFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A A W+H+G LN+ G KM KS GN L+
Sbjct: 232 GLDLTFPHHENELAQSQAAG--LPFARYWVHHGLLNIGGAKMGKSCGNS------LDLAY 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGII 347
+R HYR ID++ L EA + + G +
Sbjct: 284 VDSLGVRPVELRYYYAAAHYRSVIDYSEDALREAAVAYRRIEGFVQRATEQIGAGQLGAV 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCK 398
A +A+ +DLNT +A+ LH+ R+ L A ILG++
Sbjct: 344 PTAFAAAMDDDLNTSAALAVLHEAVRDGNTALTGGDDVTVRTALGQVRAMLDILGVDPLD 403
Query: 399 EHL-----NKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
++ ++ L +++R + +S+AD +R QL+ G ++ED +
Sbjct: 404 PAWTDGSGADDLRAVVDSLVALALEQRAQARSRRDWSAADAVRDQLKHAGVVVEDTPHGP 463
Query: 450 NGQRM 454
Sbjct: 464 RWTIG 468
>gi|78061440|ref|YP_371348.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
gi|109894878|sp|Q39A07|SYC1_BURS3 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
Full=Cysteine--tRNA ligase 1; Short=CysRS 1
gi|77969325|gb|ABB10704.1| cysteinyl-tRNA synthetase [Burkholderia sp. 383]
Length = 470
Score = 329 bits (843), Expect = 7e-88, Method: Composition-based stats.
Identities = 146/469 (31%), Positives = 218/469 (46%), Gaps = 36/469 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + F I + MY CGPTVYD AHIGN R + D+L R+L
Sbjct: 1 MPLALYDTWSRTVRPFTPIRAGQVGMYGCGPTVYDDAHIGNLRTYVFEDLLRRVLERNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+ + +R+ ++ I + T+ FV+D
Sbjct: 61 --AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTG------ESAWAIARRYTEAFVRDWH 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L PT RAT+HI + I I+ + G+ Y ++ + FDTS +YG +R
Sbjct: 113 ALNLLEPTIWCRATDHIAEQIAFIETLDRAGYVYRTDDGLYFDTSRQDDYGYLARLDRAG 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV K++ DF LWK + W+SPWGRG PGWHIECSAMS+ YLG
Sbjct: 173 LQAGKRVALG-GKRSITDFALWKFSPADVQRQMEWDSPWGRGFPGWHIECSAMSAKYLGT 231
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
+FDIH GG D I HH NEIAQ+ A + AN W+H FL L+ +
Sbjct: 232 LFDIHCGGEDHIAVHHSNEIAQTRAAHGTQ-LANYWMHGHFLTLDVHTKMSKSS-----G 285
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTST 342
+ + + R R L HYR + FT + L A+ L++ WP
Sbjct: 286 DFVRLQTLQRRGVDPLAYRYLCLTAHYRSKLHFTWESLDAAQTALNRLRHLYIGWPDGGR 345
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-L 401
+ + DLN A+ L L R + L ++ +LG+ + + +
Sbjct: 346 VDADFAARFDAEVNEDLNLPRALAVLWDLVRSNLPPATLKATVDSFDMVLGLGLREWRPV 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++ + L+ ER K ++ AD IR+ L ++G+ +ED
Sbjct: 406 AVDVPEHVRALLGERARARAEKDWAQADRIREALSAEGWRVEDTPEGQR 454
>gi|257064638|ref|YP_003144310.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
gi|256792291|gb|ACV22961.1| cysteinyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
Length = 498
Score = 328 bits (842), Expect = 7e-88, Method: Composition-based stats.
Identities = 169/512 (33%), Positives = 241/512 (47%), Gaps = 84/512 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++Y+T + +F I MYVCGPTVY++ HIGNAR I FD++ R L + +
Sbjct: 1 MIRLYDTQAHQKLDFVPNQEGVIHMYVCGPTVYNYIHIGNARTFISFDIIRRYLMWRGFD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V+N+TD+DDKII++A +E S + + ++ T F++D + L P +P
Sbjct: 61 --VTFVQNVTDVDDKIIKKANEEGRSA------AEVATEYTDAFIEDMRAMGVLDPDVRP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
+AT I MI L+ +I GHAYE ++ F S P YG S R IDE + G R
Sbjct: 113 KATEEIDSMIELVSTLIERGHAYEVEGDVYFSVRSFPEYGKLSHRNIDELEGGHRELRAD 172
Query: 182 ----KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K++P DF +WK + P EP W SPWG GRPGWHIECSAMS YLG DIHGGG
Sbjct: 173 GQGLEDRKRDPLDFAVWKAAKPGEPSWPSPWGEGRPGWHIECSAMSRKYLGLPLDIHGGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHENEIAQS A + +N W+H G LN+ G KMSKS GNF+ + ++L
Sbjct: 233 ADLAFPHHENEIAQSEAAYGVA-FSNHWMHGGMLNINGEKMSKSLGNFLLLRDIL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------- 337
++ V+R+ M HYR P+DF +R+ EA L +
Sbjct: 287 --KTVEPSVLRMFMARAHYRSPLDFNEERVAEAAASLERIVNFVERMDWLVSNPDGNAQP 344
Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--------------H 379
+ + A+ +D NT A+ + ++
Sbjct: 345 LSGDYSFEQGIEAVRAGFVEAMDDDFNTAGALGCIFTFVNDANAALGNATLNAEDASRIK 404
Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL-------------------- 419
+ + GI V K + + I+ R +
Sbjct: 405 AVRDTVVDLMGVFGISVEKAAGEEYPAEVIDL---ARDVAGYAGSDAAEAVEALLAARAQ 461
Query: 420 -LKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
K K ++ AD +R L GF++ED
Sbjct: 462 ARKEKNWAVADGVRNGLNDLGFVIEDTPQGAK 493
>gi|302873995|ref|YP_003842628.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|307689757|ref|ZP_07632203.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|302576852|gb|ADL50864.1| cysteinyl-tRNA synthetase [Clostridium cellulovorans 743B]
Length = 472
Score = 328 bits (842), Expect = 8e-88, Method: Composition-based stats.
Identities = 152/483 (31%), Positives = 231/483 (47%), Gaps = 47/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K YNTL +K+ +F + ++MY CGPTVY +AHIGN R I+ D+L + L+Y
Sbjct: 1 MKDFNFYNTLTKKVEKFIPNEEGKVKMYTCGPTVYHYAHIGNLRSYIMEDILEKYLKYIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V V NITD+ +DK+++ A++E ++ I T F D
Sbjct: 61 YD--VKRVMNITDVGHLASDADVGEDKMLKGAKREKKTVL------EIAKFYTDAFFADC 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
+L P ATN I I +I ++ +AY A + + FDTS + +Y S + +
Sbjct: 113 KKLNIDIPEIIEPATNCIEDFINMISELLKKDYAYIAGDNVYFDTSKLDSYHVLSNQSEE 172
Query: 172 EQK--MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
E + V E +K+N DF+LW + E WESPWG G PGWHIECS++S +
Sbjct: 173 ELMVAVRDDVEEDTNKRNKNDFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSSISMKH 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ DIH GG+D IFPHH NEIAQS K N W H +LN + KMSKS G
Sbjct: 233 LGEYIDIHCGGIDNIFPHHTNEIAQSEAFVG-HKWCNYWFHIHYLNDKTGKMSKSKG--- 288
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------- 337
+ L +++ + R+ L +HYR+P+ F+ + L +K
Sbjct: 289 ---DFLTVSLLESKNYNPLIYRMFCLQSHYRKPLVFSYEVLDNVVSAYNKLIKRVGDLKD 345
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
+ L NDLNT SA ++ L ++ + L + +L I
Sbjct: 346 EGELDQAKVAEYTEQFTNFLGNDLNTASAFTVIYDLLKDDISDKTKLHLVKDFDRVLSIG 405
Query: 396 VCK------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + ++K++ + ++ER K K F+SAD IR++L KG +++D K
Sbjct: 406 LTNIDNNKIQEIDKDLEEFVTSKIEERNEARKRKDFASADAIRQELLDKGIVIKDSKEGT 465
Query: 450 NGQ 452
Sbjct: 466 TWD 468
>gi|148642328|ref|YP_001272841.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
35061]
gi|148551345|gb|ABQ86473.1| cysteinyl-tRNA synthetase, CysS [Methanobrevibacter smithii ATCC
35061]
Length = 448
Score = 328 bits (842), Expect = 8e-88, Method: Composition-based stats.
Identities = 169/466 (36%), Positives = 238/466 (51%), Gaps = 44/466 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+TL R F+ ++ + I ++VCGPTVYD AHIG+ R I FD + R Y
Sbjct: 1 MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII+R+++ I K +++++D +L R
Sbjct: 59 TVFYIQNITDVDDKIIKRSKETGI------PAGDIAKKFEKRYIEDMAKLNVTGVNLFAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+H+ ++I IQ +I G AYE + + F + +G S R I+E + + K
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFKEFGKLSNRNIEELESHREIA-KTT 171
Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+ EP W SPWG GRPGWHIE +A++ +Y G +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EI Q N W+H GFLN+ G KMSKS NFITI ELL + +
Sbjct: 232 HHEAEITQMEAVSGKSPMVNYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
A V R +L THYR PIDF+ + L ++E L K + S I
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENATSDYAPLKIAK 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
++ +D NT AI A+ L +S D L + ILGI+ +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVSAIREFLDDVGFILGIDFVLK 404
Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
+ S + L+ R L K++ +D IR QL G+ + D
Sbjct: 405 --DTGSSDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448
>gi|311745980|ref|ZP_07719765.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
gi|126576191|gb|EAZ80469.1| cysteine--tRNA ligase [Algoriphagus sp. PR1]
Length = 496
Score = 328 bits (842), Expect = 9e-88, Method: Composition-based stats.
Identities = 169/505 (33%), Positives = 236/505 (46%), Gaps = 65/505 (12%)
Query: 1 MKK-KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
MK +K+YNTL RK FQAI+P + +YVCGPTVY AH+G+ARP I FD + R L +
Sbjct: 1 MKSHNLKLYNTLSRKKENFQAINPPFVGLYVCGPTVYGDAHLGHARPAITFDTVNRYLTH 60
Query: 60 YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
+ V YVRNITD+ +DKI ++A+ E I + T + +
Sbjct: 61 L--DYRVRYVRNITDVGHLQGDADEGEDKIAKKAKLEKLE------PMEIAQQYTDSYHR 112
Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
D L P +PRAT HIP+ I L++ I+ G AYE N + FDT + R
Sbjct: 113 DMALLNTWKPNIEPRATGHIPEQIALVEAILKEGLAYEVNGSVYFDTLKYNEKTPYGRLS 172
Query: 170 IDEQKMGTRVPEK----YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSS 224
+ K+NP DF LWK + P WESPWG G PGWH+EC+AMSS
Sbjct: 173 GRVIEELMSGSRDLDGQSEKRNPVDFALWKNAAPEHLMKWESPWGIGFPGWHLECTAMSS 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
YLG FDIHGGG+DL+FPHHE EIAQ + + N W+HN + + G+KM KS GN
Sbjct: 233 KYLGNHFDIHGGGMDLMFPHHECEIAQGNACNHQDP-VNYWMHNNMITINGQKMGKSLGN 291
Query: 285 FITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---- 339
FIT+ EL + K +++ IR +L HYR +DF+ L A+ K
Sbjct: 292 FITLQELFKGEHKLLEQAYSPMTIRYFILTAHYRSTLDFSNDALKAAQKGYKKLINGLRI 351
Query: 340 -----TSTSKGIIDPAVLSA-----------LYNDLNTVSAIQALHKLARESTKNHD--- 380
TS +D + + +D NT AI L L ++ +
Sbjct: 352 AKMLEYQTSDVPVDEKQIEQIENSITNAYRAMDDDFNTAQAIGHLFNLLKKINSIYTGQL 411
Query: 381 -------------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ ILG+ K + I L+ + ++
Sbjct: 412 KPAVFGEEVFSKLISTFITFVEDILGLTEEKSDTQNKM---INLLLTLYSEAKTARDYAK 468
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQ 452
D IR L+ GF+++D K+ +
Sbjct: 469 VDEIRAGLKDLGFVVKDMKDKIDWA 493
>gi|268679683|ref|YP_003304114.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268617714|gb|ACZ12079.1| cysteinyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 466
Score = 328 bits (842), Expect = 9e-88, Method: Composition-based stats.
Identities = 164/480 (34%), Positives = 248/480 (51%), Gaps = 46/480 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY++++++ F I+ + +++YVCGPTVYD AH+G+AR I FD+L R+L +
Sbjct: 1 MFIYDSVQKQKVNFIPIEENKVKLYVCGPTVYDDAHLGHARSAIAFDLLRRVLIALGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N TDIDDKII++ + S+ + IT+ +++ + L +P+
Sbjct: 60 -VTFVKNFTDIDDKIIKKMHESGKSLEV------ITTYYIERYKAEMHALHVNDADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT I ++I I +++ AY ++ I FDTS Y S S R ++E+ RV +K
Sbjct: 113 ATETIGEIIAFIDSMLQQKVAYATSDGIYFDTSKDSKYLSLSHRFVEEEASQARVEQKEE 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLDL 240
KK+ DF LWK S EP + +P+G GRPGWHIECSAM +L DIH GG DL
Sbjct: 173 KKDQKDFALWKFSKENEPSYPAPFGIGRPGWHIECSAMIEKHLASDGDFQIDIHAGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENE AQ+ C E A W+HNGF+ + G KMSKS GN + + L
Sbjct: 233 LFPHHENEAAQTRCKSHQE-LAKYWMHNGFVTISGEKMSKSLGNSFFLKDALAI------ 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------IDPAV 351
+ V+R +L THYR +F + L + L K + +
Sbjct: 286 -YSGEVLRFYLLATHYRANFNFAEEDLLNTKKRLDKLYRLKKRVFETTPSEASSSFKETM 344
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-----------LGIEV---- 396
L AL +DLN A+ +L ++ + + D P A I LGI +
Sbjct: 345 LEALSDDLNISKALASLDEMLSYANEMLDANPKDKAFKAITCANLQWIEALLGIGLYNPY 404
Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ +++ IAIE+L+ +R K K F++AD IR +LE+K L D N +++
Sbjct: 405 HYFQMGVSEEEKIAIERLLNQRAEAKKAKDFATADEIRHKLEAKQIQLMDTVNGTQWEKV 464
>gi|222444492|ref|ZP_03607007.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
DSM 2375]
gi|222434057|gb|EEE41222.1| hypothetical protein METSMIALI_00104 [Methanobrevibacter smithii
DSM 2375]
Length = 448
Score = 328 bits (842), Expect = 1e-87, Method: Composition-based stats.
Identities = 168/466 (36%), Positives = 237/466 (50%), Gaps = 44/466 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+TL R F+ ++ + I ++VCGPTVYD AHIG+ R I FD + R Y
Sbjct: 1 MEIYSTLTRSKETFETMNDNRINLFVCGPTVYDDAHIGHGRTYISFDTIKRYWEYKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII+R+++ I K +++++D +L R
Sbjct: 59 TVFYIQNITDVDDKIIKRSKETGI------PAGDIARKFEKRYIEDMNKLNVTGVNLFAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+H+ ++I IQ +I G AYE + + F + +G S R I+E + + K
Sbjct: 113 ATDHMGEIIDQIQRLIDKGFAYETEDGVYFGIDNFEEFGKLSNRNIEELESHREIA-KTT 171
Query: 185 KKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+ EP W SPWG GRPGWHIE +A++ +Y G +D+HGGGLDLIFP
Sbjct: 172 KKNPIDFALWKKRENVDEPVWNSPWGEGRPGWHIEDTAITEYYFGPQYDVHGGGLDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EI Q W+H GFLN+ G KMSKS NFITI ELL + +
Sbjct: 232 HHEAEITQMEAVSGKSPMVRYWLHTGFLNVSGEKMSKSLNNFITIRELL-------KEYD 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
A V R +L THYR PIDF+ + L ++E L K + S I
Sbjct: 285 ADVFRFFVLSTHYRSPIDFSKESLHQSEKSLDKIKKYYESLECEIIENVTSDYAPLKIAK 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIEVCKE 399
++ +D NT AI A+ L +S D L + ILGI+ +
Sbjct: 345 EEFFKSMDDDFNTPKAIAAIFGLINDSKSEIDSLADEDVFAVREFLDDVGFILGIDF--D 402
Query: 400 HLNKNISIAIEKLV-QERLILLKMKKFSSADYIRKQLESKGFILED 444
+ S + L+ R L K++ +D IR QL G+ + D
Sbjct: 403 LKDTGSSDELLTLISDVRQELRNNKQYELSDKIRNQLTDLGYEISD 448
>gi|226356626|ref|YP_002786366.1| cysteinyl-tRNA synthetase [Deinococcus deserti VCD115]
gi|226318616|gb|ACO46612.1| putative cysteine--tRNA ligase (Cysteinyl-tRNA synthetase)
[Deinococcus deserti VCD115]
Length = 491
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 180/504 (35%), Positives = 243/504 (48%), Gaps = 69/504 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I +Y+TL+R+ F P + MY+CGPTVY AH+G+A+ + FDV+ R +
Sbjct: 11 DPNIFLYDTLQRQKVRFTPTTPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRAFLHLG 70
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YV NITD+ +DKI +RA E + K FV+D
Sbjct: 71 YQ--VRYVGNITDVGHLQNDADEGEDKIAKRAALEQLE------PMEVADKYFWSFVRDM 122
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L L P+ PRAT HI + I LI+ +I GHAYE+ + FD S P YG S RK+D
Sbjct: 123 EALNILKPSINPRATGHITEQIRLIEELIERGHAYESQGSVYFDVRSWPEYGKLSGRKLD 182
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
EQ+ GTR + K++P DF LWKR+ WESPWG G PGWHIECSAMS YLG+
Sbjct: 183 EQEEGTREVVREEKRDPRDFALWKRAEAGHIMRWESPWGVGFPGWHIECSAMSLKYLGEG 242
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGGLDL FPHHE EIAQS A A W+HN L + G KMSKS GNF TI E
Sbjct: 243 FDIHGGGLDLQFPHHEAEIAQSEAAGHA--FARYWMHNNMLTIGGEKMSKSKGNFTTIAE 300
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----- 345
LLE V+R ++ +HYR +F+ + A + +T G
Sbjct: 301 LLE-------KHDPMVVRFLLVGSHYRSVTEFSEEAFESARNGYRRLTETLHEVGRRLQG 353
Query: 346 --------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------HDLLPI 384
A AL +D NT A+ AL L + D L
Sbjct: 354 APAGATEALDARVQAHTHAFEDALRDDFNTPKAVAALFGLTGDVNAALASGPVGQDTLNR 413
Query: 385 FNAS-----AHILGIE----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ +LG+ ++ + + +E +++ R K+++ AD +R L
Sbjct: 414 VQEAYMALGGGVLGLFHASASERQDDTQVVDTLMELVLKARQHYRLSKQYAQADELRDTL 473
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
G +ED K+ RWK+
Sbjct: 474 ARVGVTVEDTKD------GVRWKR 491
>gi|6318288|gb|AAF06821.1|AF065890_2 cysteinyl-tRNA synthetase [Thermoproteus tenax Kra 1]
Length = 484
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 158/473 (33%), Positives = 238/473 (50%), Gaps = 44/473 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT +++ F + P R YVCG T YD H+G+ R + FD+L R L + E
Sbjct: 6 LRIYNTASKRVEPFSVLTPGVARGYVCGITPYDSVHVGHGRVYVFFDILRRYLEHLGLE- 64
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TD+DDKII RAR+E + ++ + + +++ RL PR
Sbjct: 65 -VKLVINFTDVDDKIINRAREEFGADAVSR-WREVPERYIREYFDVMERLYVKPAYAYPR 122
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I+ ++ G+AY + + F+ +P YG FS ++I+E G RV +
Sbjct: 123 VTEYVGDMLEWIRALVDRGYAYVAPDGSVYFEVGKVPRYGEFSGQRIEELVAGARVEPEP 182
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK +P EP W SPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 183 GKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 242
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L +
Sbjct: 243 HHENEIAIARAMHGVDYFARYWIHVGYLTVGGEKMSKSLGNIITLKEVLS-------KYD 295
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------------- 346
+RLA M+HYR+P++F+ L A LL
Sbjct: 296 GEALRLAYAMSHYRKPMEFSYDLLDRAVELLGTMYTAYDELSQAVADAGERDVAPLAEEA 355
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLAR----------ESTKNHDLLPIFN---ASAHI 391
AL +D++T A +AL+ +AR + L I A +
Sbjct: 356 SSYRRKFEEALADDMSTNEAARALYDMARFIISKVLYSVDKISRETALGILRDYAEMADV 415
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG+ +E + + ++ A+ +V+ R L ++++ AD +R + + G + D
Sbjct: 416 LGLLNKRE-VPRELAEAVRAIVEARSRLRSERQYALADMLRDRARALGVEMHD 467
>gi|169796523|ref|YP_001714316.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156364|ref|YP_002318784.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215483986|ref|YP_002326211.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|301346200|ref|ZP_07226941.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301510179|ref|ZP_07235416.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301594397|ref|ZP_07239405.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|332853945|ref|ZP_08435065.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332870201|ref|ZP_08439096.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|226735042|sp|B7GWA1|SYC_ACIB3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735043|sp|B7IBU3|SYC_ACIB5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|229558611|sp|B0VAU1|SYC_ACIBY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169149450|emb|CAM87336.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055524|gb|ACJ40426.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213985743|gb|ACJ56042.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB307-0294]
gi|332728301|gb|EGJ59682.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332732368|gb|EGJ63625.1| cysteine--tRNA ligase [Acinetobacter baumannii 6013113]
Length = 473
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 178/499 (35%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + R+ +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERIDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + ++ IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|239503714|ref|ZP_04663024.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii AB900]
Length = 473
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 257/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + EK N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EKYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIIDPA 350
VIR ++ +HYR P++F+ L EA+ L+++ + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
+A+ +D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + ++ IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQDALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|320334065|ref|YP_004170776.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
gi|319755354|gb|ADV67111.1| cysteinyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
Length = 485
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 169/503 (33%), Positives = 234/503 (46%), Gaps = 69/503 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I +++TL R+ +F+ P + MY+CGPTVY AH+G+A+ + FDV+ R +
Sbjct: 6 PDIYLHDTLTRQKVKFEPTTPGRVGMYLCGPTVYSDAHVGHAKKEVAFDVVRRYFLHRGY 65
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YV NITD+ +DKI +RA E + K FV D
Sbjct: 66 --AVRYVSNITDVGHLQNDSDDGEDKIAKRAALEQLE------PMEVADKYFWSFVSDME 117
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL L P+ PRAT HI + I LI+ +I GHAY AN + FD S P YG S RK+D+
Sbjct: 118 RLNVLKPSINPRATGHITEQIELIEELIARGHAYAANGSVYFDVRSWPRYGVLSGRKLDD 177
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
Q+ GTR + K++P DF LWKR+ W+SPWG G PGWHIECSAMS YLG+ F
Sbjct: 178 QEEGTREDVREEKRDPRDFALWKRAEAGHIMRWDSPWGVGFPGWHIECSAMSLKYLGEGF 237
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGGLDL FPHHE EIAQS A A W+HN L + G KMSKS GNF T+ +L
Sbjct: 238 DIHGGGLDLQFPHHEAEIAQSEAAGHA--FARYWMHNNMLTIGGEKMSKSKGNFTTLADL 295
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
V+R ++ +HYR + A + + P
Sbjct: 296 YGRV-------DPMVVRFLLISSHYRSITEMNDDAFVSAANGYRRLNEALHEVERRLPDA 348
Query: 352 LSALY-------------------NDLNTVSAIQALHKLARESTKNHDLLPIFNASA--- 389
+D NT A+ AL L + + + NA+
Sbjct: 349 ADGEDAALSRKIAGHVAAFEAAMSDDFNTPKAVAALFGLTTDVNAALNAGAVPNATLVAA 408
Query: 390 ---------HILGIEVCKEHLNKNISIAIEKL----VQERLILLKMKKFSSADYIRKQLE 436
+LG+ + ++ + + L ++ R K++ AD +R L
Sbjct: 409 RDAYRQLGGDVLGLFADTQDARQDDTQLVSALMDLVLKARQNYRLNKQYGEADELRDTLT 468
Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
G +ED K+ RW++
Sbjct: 469 KVGVTVEDTKDGP------RWRR 485
>gi|260557959|ref|ZP_05830171.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
gi|260408469|gb|EEX01775.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
Length = 473
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 257/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVTKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATMLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + + IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|296122689|ref|YP_003630467.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
gi|296015029|gb|ADG68268.1| cysteinyl-tRNA synthetase [Planctomyces limnophilus DSM 3776]
Length = 517
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 160/531 (30%), Positives = 243/531 (45%), Gaps = 89/531 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL R+ FQ ++P ++MY+CGPTVY AHIG+ ++FD + R L Y
Sbjct: 1 MPLRVYSTLSRQKETFQTVEPGKVKMYLCGPTVYKPAHIGHMVGPVIFDTVKRYLAYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V NITD+DDK+I +A ++ ++ + + T + + + + H
Sbjct: 61 D--VTFVVNITDVDDKLINKANEKGMTVE------ALAKQMTDDYFDNLKLMGVDSIDHF 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P AT+HI M+ +I ++ G+AY N ++ F + +YG SRR ++E GTR
Sbjct: 113 PYATDHIGDMLDMIGKLVEKGYAYPLNGDVYFRCTKDEDYGKLSRRSLEEMLTGTRAESM 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++PADF LWK S P EP W+SPWG+GRPGWHIECSAMS LG DIHGGGLDL+F
Sbjct: 173 GGKESPADFALWKGSKPGEPAWDSPWGKGRPGWHIECSAMSKKILGDSIDIHGGGLDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGR 300
PHHENE+AQS A W+HNG + G+ K+ + + K G +
Sbjct: 233 PHHENELAQSESCTG-HPFARYWMHNGLMQASGQAGKVGGQHDKKGDAESQIAGKLAGSQ 291
Query: 301 S-----------WPAPVIRLAMLMTHYREPIDFTVQRLTEA----------EILLSKWPQ 339
+R +L THYR PIDF+++R+ E L + +
Sbjct: 292 GAESVKTAVFAHHHPETVRFFLLATHYRSPIDFSLERIAETGKSLEGFFRLFELYERLTK 351
Query: 340 TSTS---------------------------KGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + L A+ +D NT A+ L ++
Sbjct: 352 KNFYSLIPAAKRSDSKPITAETPDQQAFATELNGLKDRYLDAMDDDFNTGGAVGLLFEMR 411
Query: 373 RESTK-------------------NHDLLPIFNASAHILGIE-----VCKEHLNKNISIA 408
R D + + +LG+ + +
Sbjct: 412 RVINGFISEKKLETGAGSAADLQLLTDAMTLVRELGLLLGVFREPRAKESSADDGLLDGL 471
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ ++Q R K K F+ AD IR +L ILED + T WK+
Sbjct: 472 MQLIIQIRADARKSKNFAVADLIRNKLTELKLILEDRPD------GTLWKK 516
>gi|317056857|ref|YP_004105324.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
gi|315449126|gb|ADU22690.1| cysteinyl-tRNA synthetase [Ruminococcus albus 7]
Length = 471
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 158/485 (32%), Positives = 238/485 (49%), Gaps = 51/485 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL K+ EF + + MY CGPTVY +AHIGN R I+ DVL + +R+ +
Sbjct: 1 MKIYNTLSHKVEEFVPNEAGKVSMYTCGPTVYHYAHIGNLRSYIMEDVLEKYMRWTGLD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F D +L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKFYTDAFFADCAKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P AT +I + I +I ++I G+AYEA I FDTS + Y F ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172
Query: 175 --MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E WESPWG G PGWHIECS +S LG
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGD 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D IFPHH NEIAQS K N W H LN + KMSKS G F+T++
Sbjct: 233 KLDIHCGGVDNIFPHHTNEIAQSEAYIG-HKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------ 337
L E + + V R L +HYR+ + F+ + L A+ K
Sbjct: 292 LLEE------KGYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYDKLTARIAALLNEKD 345
Query: 338 --PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--G 393
P + K + A +A+ DLNT + + ++ + + L +L G
Sbjct: 346 AAPADAAKKDELKAAFAAAMDEDLNTSNGMTVIYDILKSDASAATKLAAIEDIDKVLCVG 405
Query: 394 I-----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ ++ +++ + +I + LV+ER K K F+ AD +R ++ + G+ +++ +
Sbjct: 406 LIAAANKLNEKNSSADIPAEVMALVEERQAARKAKDFAKADELRDKITALGYEVKETRQG 465
Query: 449 DNGQR 453
+
Sbjct: 466 TTITK 470
>gi|220911630|ref|YP_002486939.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|254765174|sp|B8HCR7|SYC_ARTCA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219858508|gb|ACL38850.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 488
Score = 328 bits (841), Expect = 1e-87, Method: Composition-based stats.
Identities = 162/495 (32%), Positives = 229/495 (46%), Gaps = 58/495 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T ++ F + +Y CG TV H+G+ R I FD L R L +
Sbjct: 1 MTLRFYDTASAEVRNFVPLVAGRASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLTHRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPS-------IPINDAISIITSKNTQQFVKDTTRLA 115
VT VRN+TDIDDKI+ ++ S + + + Q+F+K L
Sbjct: 60 -LRVTVVRNVTDIDDKILAKSEASFASGFQPEPGEIPGEEWWALAYRYEQEFLKAYDALG 118
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDE 172
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YG+ +R+ ID+
Sbjct: 119 VSRPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDD 178
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + K++P DF LWK S EP W SPWG GRPGWH+ECSAM + YLG
Sbjct: 179 MQAAADADPR-GKRDPRDFALWKGSKEGEPATASWASPWGAGRPGWHLECSAMVTKYLGT 237
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGGLDL FPHHENE+AQS A AN W+HNG + EG KMSKS GN I+
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSQAAG--HPFANFWMHNGMVTYEGEKMSKSIGNTISPA 295
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------- 340
E+LE V+R + HYR +D+ L EA + +
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSILDYRPTSLQEAAAAVERIDGFLAKAVARFG 348
Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLL 382
A +A+ +DLN A+ ALH+ R +
Sbjct: 349 TDFGFVEGDYGPSTGAVEAFYAAMDDDLNVPRALAALHETVRAGNTALADGDDDSARKAM 408
Query: 383 PIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+ E + +++ +E + R K +S++D IR L
Sbjct: 409 NAVVIMTDVLGLNAVAGSEKTSTREAEALAVLVEAQLAARATARAEKDWSASDAIRDTLN 468
Query: 437 SKGFILEDYKNPDNG 451
G ++ED +
Sbjct: 469 EAGVVVEDGADGPTW 483
>gi|319442435|ref|ZP_07991591.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
Length = 474
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 149/493 (30%), Positives = 233/493 (47%), Gaps = 60/493 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++I++T R++ +F + + +Y+CG TV HIG+ R + FD+L L
Sbjct: 1 MTLRIFDTATRELRDFVPLQEGHASVYLCGATVQSIPHIGHVRSGVAFDILRNWLAAKGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +VRN+TDIDDKI+ ++ + N + + + F + L P+ +
Sbjct: 61 D--VAFVRNVTDIDDKILAKSAEN------NRPWWEWAATHERAFTRAYDLLGVTPPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P+MI I+ II +G Y + + T+ +P+YG S +K+DE G
Sbjct: 113 PRATGHVPEMIAYIRRIIDNGLGYATEDGSVYCRTAQVPDYGFLSHQKLDELDQGEDAV- 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF +WK + P EPGWE+PWG GRPGWHIECSAMS+ YLG FDIH GG+DL
Sbjct: 172 -PGKEDPRDFAMWKAAKPGEPGWETPWGFGRPGWHIECSAMSNKYLGGAFDIHAGGMDLQ 230
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQ+ + AN W+HNG++ + G KMSKS GN +++ +L +
Sbjct: 231 FPHHENEAAQAH--AAGDAFANHWMHNGWVTMSGEKMSKSLGNVLSVPNVLTKVR----- 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KGIIDPA 350
+R + HYR ++++ + L +A K + G PA
Sbjct: 284 --PIELRWYLGSAHYRSMLEYSEKALQDAAAGFRKIEKFLDRAVELLGAEAVVAGAWRPA 341
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
AL +DL +A+ + RE D + A +LG++ +
Sbjct: 342 FEEALDDDLGVPTALAVIQDAVREGNAALDAGDTAAVQRIAGEVRAMMGVLGVDPLSDTW 401
Query: 402 NKNI-------------SIAIEKL-------VQERLILLKMKKFSSADYIRKQLESKGFI 441
AI L ++ R K +++AD +R +L+ G
Sbjct: 402 AGEDSKGRGQGIGAGASDEAIGALDVLVKAELERRATARAEKDWATADAVRDRLKDAGIA 461
Query: 442 LEDYKNPDNGQRM 454
+ D +
Sbjct: 462 VADSADGATWSLG 474
>gi|21672736|ref|NP_660803.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
gi|22654284|sp|P46241|SYC_BUCAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|21623381|gb|AAM68014.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Sg (Schizaphis
graminum)]
Length = 463
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 175/484 (36%), Positives = 252/484 (52%), Gaps = 49/484 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT K F+ I I +YVCG TVYDF HIG+AR +VFD++ R LR +
Sbjct: 1 MLKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+RNITDIDDKII ++ +E IS T+ ++ KD + L P +P
Sbjct: 61 --VKYIRNITDIDDKIILKSLKEKID------ISAFTNIMIKEMNKDFSLLGISPPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R TN+I +I +I+ +I + +AY + ++IF +S YG+ SR+ +D+ GTR+
Sbjct: 113 RVTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISID 172
Query: 183 YHKKNPADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKN +DFILW K + W SPWG+GRPGWHIEC+A+++ + DIHGGG DL+
Sbjct: 173 KEKKNSSDFILWKKSKKEEKFSWNSPWGKGRPGWHIECTAITNVFFKDYIDIHGGGSDLL 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEI+QS C ++ W+H+G + ++ +KMSKS GN + ++LE
Sbjct: 233 FPHHENEISQSRCLNKN-FRVKFWMHSGLVIIKNQKMSKSLGNSFFLKDVLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------DPAVL 352
+ A V+R L THYR PI +T + L ++E+ L T I +
Sbjct: 285 YEAEVLRFFFLSTHYRHPIYYTEENLKKSEMSLEYLYVTLYGTKPIFDPIEGVNFEIDFF 344
Query: 353 SALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEV-------- 396
AL +D NT A L KLAR+ K++ A LG +
Sbjct: 345 EALNDDFNTPQAFSILFKLARKINYLKKIDLSKSNFFAFRLQKLAGYLGFLLNTSQYFLQ 404
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
K ++ I IE L+++R K K + AD +R +L ILED T
Sbjct: 405 KKLPFDEEIIKKIESLIEKRNFARKSKLWKEADKLRDKLIKLNVILED------LPEKTL 458
Query: 457 WKQK 460
W+ K
Sbjct: 459 WRFK 462
>gi|315605246|ref|ZP_07880292.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313063|gb|EFU61134.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 486
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 155/503 (30%), Positives = 233/503 (46%), Gaps = 66/503 (13%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +Y++ +I + P + +Y+CG TV H+G+ R + FD L R LR
Sbjct: 1 MSTMLHLYDSKSARIQPLNPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRS 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E VTYVRN+TDIDDKI+ ++ + + ++F + L APT
Sbjct: 61 GYE--VTYVRNVTDIDDKILTKSAESGWD------WWAWAYRFEREFTQAYDTLGVQAPT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK----- 174
++PRAT HIP I L+ +I GHAY + FD S +YGS +R+++ + +
Sbjct: 113 YEPRATGHIPDQIDLVSRLIDAGHAYSDGRGNVYFDVHSQADYGSLTRQRLADMRTTEDD 172
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ K++P DF LWK + P EP WESPWGRGRPGWH+ECSAMS YLG F
Sbjct: 173 AQIDEAVEAGKRDPRDFALWKATKPGEPDTASWESPWGRGRPGWHLECSAMSRRYLGDEF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGG+DL FPHHENE AQS A A +W+HN ++ +G KMSKS GN ++I L
Sbjct: 233 DIHGGGIDLRFPHHENEQAQSHGAGWA--FARLWVHNAWVTTKGEKMSKSLGNVLSIGAL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------- 344
E PA +R A+ H+R I++ L A K+
Sbjct: 291 TEEH-------PAVAVRWALSTVHHRSAIEWGPDTLPAAHAAWEKFSSFVARAIEAVGEA 343
Query: 345 ---------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFN 386
G + A ++A+ +DLN A+ LH+ + +
Sbjct: 344 GADEIALGPGDLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDADGIYREQVLVR 403
Query: 387 ASAHILGIEVCKEHLN---------------KNISIAIEKLVQERLILLKMKKFSSADYI 431
+ +LG++ + + + +++ER K + AD +
Sbjct: 404 SMLDVLGLDPASQQWRGQAGIDAGGAAAGEHSALDALVGAVLEERAQARAAKDWGRADEL 463
Query: 432 RKQLESKGFILEDYKNPDNGQRM 454
R +L + G + D ++
Sbjct: 464 RDRLAAAGVSVADGRDGVTWSVG 486
>gi|325681471|ref|ZP_08160997.1| cysteine--tRNA ligase [Ruminococcus albus 8]
gi|324106961|gb|EGC01251.1| cysteine--tRNA ligase [Ruminococcus albus 8]
Length = 470
Score = 328 bits (840), Expect = 1e-87, Method: Composition-based stats.
Identities = 161/484 (33%), Positives = 236/484 (48%), Gaps = 50/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNTL K+ EF + MY CGPTVY FAHIGN R I+ DVL + +R+ +
Sbjct: 1 MRIYNTLSHKVEEFVPNTAGKVAMYTCGPTVYHFAHIGNLRSYIMEDVLEKYMRWQGLD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F D +L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKFYTDAFFTDCAKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P AT +I + I +I ++I G+AYEA I FDTS + Y F ++ +
Sbjct: 113 NIKTPDVVAPATTYIDEFIKVISSLIEKGYAYEAGGNIYFDTSKLDEYYVFHNFSAEDLE 172
Query: 175 --MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E WESPWG G PGWHIECS +S LG+
Sbjct: 173 VGVREGVEEDTNKRNKADFVLWFTKSKFDDQELKWESPWGVGYPGWHIECSCISMKNLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D IFPHH NEIAQS K N W H LN + KMSKS G F+T++
Sbjct: 233 YLDIHCGGVDNIFPHHTNEIAQSEAYIG-HKWCNYWFHVHHLNTDTGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L E + + V R L +HYR+ + F+ + L A+ K S
Sbjct: 292 LLEE------KGYDPLVYRFFCLQSHYRKSLVFSWENLDNAKTAYEKLTARIASLMSGDK 345
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--GI 394
+ +A+ +D+NT + I AL+ + + T L + +L G+
Sbjct: 346 GEVISADFDALKAKFTAAMDDDINTSNGITALYDVLKADTTPATKLALIEDFDKVLSVGL 405
Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ +E +I + LV+ER K K F+ AD IR ++ + G+ +++ +
Sbjct: 406 IKAAEKQNEEKSGGDIPAEVMALVEERQAARKAKDFAKADEIRDKIAALGYAVKETRQGT 465
Query: 450 NGQR 453
+
Sbjct: 466 EITK 469
>gi|262341324|ref|YP_003284179.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272661|gb|ACY40569.1| cysteine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 485
Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats.
Identities = 149/479 (31%), Positives = 224/479 (46%), Gaps = 51/479 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KIYN+L K F+ I + +YVCGPTVY+ H+GN R I FDV++R L++
Sbjct: 10 RNNLKIYNSLTGKKELFKPIHEEYVGIYVCGPTVYNHLHLGNCRTFISFDVVFRYLKHLG 69
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ +DKI +++R E I K T F
Sbjct: 70 Y--KVRYVRNITDVGHLENEENDLEDKISKKSRIEGLE------PMEIVQKYTLSFHNLL 121
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--FSRRK 169
L P +P AT HI + I +I+ +I AYE N + F+ S +
Sbjct: 122 NILNVQPPNIEPTATGHIIEQIDMIEKLIAKNLAYEINGSVYFNLKEYGKLYSYGILSKN 181
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWK-RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
++ + F LWK + W SPWG+G PGWHIEC+AMS+ YLG
Sbjct: 182 KIDKLFNKEFNFQEKNVIHKIFSLWKRAHSGHIMSWNSPWGKGFPGWHIECTAMSTKYLG 241
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDIHGGG+DL FPHHE E+AQ+ A+ W+H L L G+KMSKS GNF+ +
Sbjct: 242 VTFDIHGGGIDLKFPHHECELAQATAIYNKSYLAHYWMHTNMLTLNGKKMSKSTGNFLIL 301
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
++++ F + + ++R +L +HYR +DF+ + L AE +K + D
Sbjct: 302 KDVIQ---FYKKPFSPSILRFFILQSHYRSVMDFSKEGLMNAEKGYNKIMKAINKLKNFD 358
Query: 349 PA-----------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLP--IFNA-- 387
P A+ +D N I L K +++ +
Sbjct: 359 PNISKKNHNVFNVYDWIKDCYKAIDDDFNIPLLISHLFKATHVINSLNEIEKSYLLKKYM 418
Query: 388 ---SAHILGIEVCKEHLN---KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
ILG++ ++ N K + I +++L++ R K K + +D IR++L S G
Sbjct: 419 TYFVFDILGLQDQEQKTNSSEKKLKILVKRLIKFRAEARKQKNWIVSDKIREELSSIGI 477
>gi|325529638|gb|EGD06509.1| cysteinyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 466
Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats.
Identities = 158/470 (33%), Positives = 229/470 (48%), Gaps = 38/470 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + F I P + MY CGPTVYD AHIGN R + D+L R+L
Sbjct: 1 MPLELYDTWSRAVRPFTPIRPGRVGMYCCGPTVYDDAHIGNLRTYVFEDILRRVLMRNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+ + +R+ ++ I + T FV+D
Sbjct: 61 --AVRHVVNITDVGHLTSDADEGEDKMEKGSRRTG------ESAWAIAQRYTDAFVQDWR 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L PT RAT+HI + I I+ + G+ Y ++ + FDT +YG +R
Sbjct: 113 ALNLLEPTIWCRATDHIAEQIAFIETLERAGYVYRTDDGLYFDTRRQDDYGHLARLDRAG 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV K++ DF LWK S + W+SPWGRG PGWHIECSAMS+ YLG
Sbjct: 173 LQAGKRVAMG-GKQSVTDFALWKFSRAGVKRQMEWDSPWGRGFPGWHIECSAMSAKYLGT 231
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR-KMSKSNGNFITI 288
+FDIH GG D I HH NEIAQ+ A + AN W+H FL L+ KMSKS+G+F+ +
Sbjct: 232 LFDIHCGGEDHIAVHHSNEIAQTQAAHGT-RLANYWLHGHFLTLDADAKMSKSSGDFVRL 290
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKG 345
L E R+ R L HYR + FT L A+ L++ G
Sbjct: 291 QTLQE------RNIDPLAYRYLCLTAHYRSKLHFTWASLDAAQTALNRLRQLYVAWPDGG 344
Query: 346 IIDPAVLSALY----NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
DPA ++ +DLN A+ L +L R L ++ +LG+ +
Sbjct: 345 RADPAFVARFDAELNDDLNLPRALAVLWELVRSDLPPSTLKATVDSFDTVLGLGLRDWTA 404
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ +I + L+ R + ++SAD IR L ++G+ +ED
Sbjct: 405 VSFDIPEDVRVLLDARERARAERDWASADRIRDSLRAQGWRVEDTTEGQR 454
>gi|297627017|ref|YP_003688780.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
gi|296922782|emb|CBL57360.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 467
Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats.
Identities = 165/483 (34%), Positives = 235/483 (48%), Gaps = 51/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+Y+ ++ F + P + +Y CG TV H+G+ R +VFDVL R
Sbjct: 1 MSFHLYDESSGQVVPFVPLIPGKVSIYHCGLTVQSSPHLGHMRKEVVFDVLRRWFDASGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V NITDI++KI ++A + + + + L C+ P+++
Sbjct: 61 --RVRVVANITDINEKIWQKAAEAGLE------WFELAYAVELELHRAYASLGCIPPSYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT HI +MI LI +I GHAY + + ++ FD S P YG S +KID+ T
Sbjct: 113 PRATGHITEMIELINRLIERGHAYAADDGSGDVYFDVRSWPEYGELSHQKIDDMVAATDA 172
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +P DF LWK S P EP W SPWGRGRPGWH+ECSAMS YLG+ FDIHGG
Sbjct: 173 DPR-GKHDPRDFALWKGSKPDEPATASWPSPWGRGRPGWHLECSAMSLKYLGEAFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE AQS A A+ W+HN F+ + G KMSKS GN T+ E+
Sbjct: 232 GIDLRFPHHENEQAQSRAAGY--DFAHYWMHNAFVTMAGEKMSKSLGNGATVAEVT---- 285
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP----------QTSTSKGI 346
+ +PA +RL + HYR I+++ LTEA L + Q +
Sbjct: 286 ---KHYPARAVRLYLAQPHYRSTIEYSDTSLTEATAQLDRIDSFLNRAHVSGQAAFDTAD 342
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVC 397
+ A + A+ NDL T +A L+ +E + D + A H+LG++
Sbjct: 343 LPDAFVEAMDNDLGTPAAFAVLYDTIKEGNRAFDANDQGAATNCVAQVRAMLHVLGLDPH 402
Query: 398 KEHLNKNI--------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ ++ ++ ER + K F++AD+IR L G LED N
Sbjct: 403 EPQWADQAGGTDLAVTDGLVKLVLDERQAARERKDFAAADHIRDSLTELGIRLEDGANGT 462
Query: 450 NGQ 452
Sbjct: 463 RWT 465
>gi|94971018|ref|YP_593066.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
Ellin345]
gi|122986084|sp|Q1IJF8|SYC_ACIBL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|94553068|gb|ABF42992.1| cysteinyl-tRNA synthetase [Candidatus Koribacter versatilis
Ellin345]
Length = 495
Score = 328 bits (840), Expect = 2e-87, Method: Composition-based stats.
Identities = 166/516 (32%), Positives = 233/516 (45%), Gaps = 79/516 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL KI FQ ++ + +RMY CGPTVYD+ HIGN R IV D L R L+
Sbjct: 1 MALELFNTLSGKIETFQPLEDNEVRMYACGPTVYDYGHIGNFRTFIVVDTLRRFLKQSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +V N+TD+DDKII A ++ ++ T+K + F++D L P
Sbjct: 61 --KLKHVMNVTDVDDKIIRNAARDGKTV------QEYTAKYRKAFLEDCEALNIEHPELL 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
AT+HI +M I+ + AY+ + F + P YG S++ G RV
Sbjct: 113 VNATDHIDEMARFIKRMEDLDVAYKTEDGSYYFRIAKFPEYGKLSKKDFAGMNDGARVDV 172
Query: 182 KYHKKNP-ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++K+ DF LWK P E W++ G GRPGWHIECS MS YLG+ FDIH GG DL
Sbjct: 173 DEYEKDNARDFALWKAPKPGEAKWDTVIGSGRPGWHIECSIMSMKYLGESFDIHLGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS +K AN W+H+ FL +EG+KMSKS GNF T+ +L+
Sbjct: 233 VFPHHENEIAQSESVTH-KKFANFWVHSRFLLVEGQKMSKSLGNFFTVRDLI------LM 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----------------S 343
IR ++ YR+ ++FT L +A I + +
Sbjct: 286 GHKPSSIRFLLMSVPYRKQLNFTFDGLKQAAISVDRLRNFKRRIQTEPFAEGTNDKIGLM 345
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
+ +AL NDLNT A+ + L R+ D LL I
Sbjct: 346 ANETITKIKAALDNDLNTAEALAPIFDLVRDVNAAADAGEVKRGDVASLLEALQKFDEIF 405
Query: 393 GIEVCKE----------------------------HLNKNISIAIEKLVQERLILLKMKK 424
+ + +E LV E K K
Sbjct: 406 AVLNDDDSGKVKFAVDWANQEGKADKISAETAEMAKAAGLSDEKVEALVAEHSAARKAKD 465
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
F +D IR +L G ILE+ K+ RWK+K
Sbjct: 466 FKRSDAIRAELMESGIILENTKD------GVRWKRK 495
>gi|300744321|ref|ZP_07073340.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
gi|300380046|gb|EFJ76610.1| cysteine--tRNA ligase [Rothia dentocariosa M567]
Length = 476
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 158/484 (32%), Positives = 240/484 (49%), Gaps = 47/484 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y++ I +F+ + P R+Y CG TV H+G+ R +VFD L R +RY
Sbjct: 1 MTMRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQ----EHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
VT VRN+TDIDDKI+ ++ + + N+ + + + F + L
Sbjct: 61 --KVTTVRNVTDIDDKILAKSVESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDP 118
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YG+ +R+ +D+ +
Sbjct: 119 PTYEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDMQD 178
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK EP W+SPWGRGRPGWH+ECSAM+ YLGK FD
Sbjct: 179 SADADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKRFD 237
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A + AN W+HNG + EG KMSKS GN I+ ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPVQML 295
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTST 342
+ + V+R + HYR +D+ L EA + + + +
Sbjct: 296 QQAR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATLELMVPNP 348
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIE 395
+ AL +D+N A+ LH+ R + A A++LG+
Sbjct: 349 QDRRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLGLI 408
Query: 396 VC--------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ + I ++++R K +++AD +R L + G ++D
Sbjct: 409 SLMNLDGSGASGAEHQALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVKDGAQ 468
Query: 448 PDNG 451
Sbjct: 469 GSTW 472
>gi|170290560|ref|YP_001737376.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
gi|170174640|gb|ACB07693.1| cysteinyl-tRNA synthetase [Candidatus Korarchaeum cryptofilum OPF8]
Length = 472
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 146/486 (30%), Positives = 243/486 (50%), Gaps = 53/486 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++NTL R+ F+ + + M+VCGPTVYD++H+G+AR + +D L R LR
Sbjct: 6 DLVVFNTLTRRFEPFEPLVGRRVFMFVCGPTVYDYSHLGHARTYVFYDTLARFLRKLGY- 64
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ Y++NITD+DDKI+ RA +E + + + +D L +
Sbjct: 65 -SLFYLQNITDVDDKIVNRAAEEGRD------PVELAREFESYYYEDMRALNITSVNLYA 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RA++++ ++ ++ +I G AY + + FD ++ P+YG S ++ +E + R+
Sbjct: 118 RASDYLKEIFEQVETLIKLGKAYVTESGVYFDITTFPDYGKLSGQRPEELR-VHRIEPDP 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LW+ E GWESPWG GRPGWHIE +A+S + GK +DIHGG ++L FP
Sbjct: 177 TKRNPGDFALWRNRPREEFGWESPWGYGRPGWHIEDTAISIKHFGKQYDIHGGAIELAFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EIAQ+ + WIH G L +EG KMSKS GNF+TI E L R +
Sbjct: 237 HHEAEIAQAESFTGEKPFVKYWIHTGLLTVEGEKMSKSLGNFVTIREAL-------REYD 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------- 348
A +R+ +L HYR PIDF + L +A + + ++
Sbjct: 290 ANTLRIFLLSRHYRSPIDFRWEYLEQARSSYERIINCLENLKELEIGEEGDEEREFLSRV 349
Query: 349 ----PAVLSALYNDLNTVSAIQALHKLARESTK------------NHDLLPIFNASAHIL 392
+ + +D+NT A+ L++L R+ ++++ F+ +L
Sbjct: 350 RERRDSFYRRMLDDVNTAEALGELYELVRDVNSFSERMGKISEAGRNEVISTFSELLDLL 409
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
G+ + + + I ++ R L + +++ AD IR ++ G ++D
Sbjct: 410 GLRIEEGPDTSMLHALISLILDVRENLRRRREYDLADEIRGRMRELGIDVQDT------P 463
Query: 453 RMTRWK 458
+ T+W+
Sbjct: 464 KGTKWR 469
>gi|149196426|ref|ZP_01873481.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
gi|149140687|gb|EDM29085.1| cysteinyl-tRNA synthetase [Lentisphaera araneosa HTCC2155]
Length = 463
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 159/480 (33%), Positives = 235/480 (48%), Gaps = 53/480 (11%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R+ F I+ R+Y CGPTVY++AHIGN R + D+L R+L+ + VT V
Sbjct: 1 MSREAEPFTPINEGEARLYTCGPTVYNYAHIGNFRAYVFEDLLRRVLKL--NDYKVTQVM 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N+TD+DDK I +++ S+ + T+ + F +D +L H P AT+HIP
Sbjct: 59 NLTDVDDKTIRDSQKAGMSL------NDFTAIYKKAFFEDLEKLNVEPAEHYPAATDHIP 112
Query: 131 QMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP- 188
QMI +IQ ++ G+AY A++ + + +YG ++ D Q GTRV ++K
Sbjct: 113 QMIDMIQTLVDKGYAYLADDKCVYYSIDKFEHYGCLAKIDRDNQMSGTRVKTDEYEKESV 172
Query: 189 ADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+DF LWK + W+SPWG GRPGWHIECSAM+ LG FD+H GG+D +FPHHE
Sbjct: 173 SDFALWKAWDKADGDVKWDSPWGEGRPGWHIECSAMAKATLGDHFDMHTGGVDNMFPHHE 232
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
+EIAQS A+ + N W+H L + KMSKS GNF T+ +L E + W
Sbjct: 233 DEIAQSEAANGCK-YVNYWMHCAHLRINNAKMSKSLGNFYTLAQLTE------KGWAGAE 285
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------------- 344
+R +L THYR ++F V+ E LS T
Sbjct: 286 VRYMLLATHYRAGLNFVVETGAEKSESLSNARAAITRLQNFIERIKDKADGELSSELSEL 345
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
L +L +DLN A+ + RE + D LL IL
Sbjct: 346 CAKAQDEFLDSLNDDLNISGALGKMFDFIREGNRILDSNETVNQEALLNTLKYFNRIL-- 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+V K L+ ++ I L +ER K + +D IR QL+++G+++ED ++
Sbjct: 404 DVMKFDLDNDVPAEILALAEERQQARADKNWGRSDEIRDQLKAQGWVIEDTPAGPKVKKG 463
>gi|262373040|ref|ZP_06066319.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313065|gb|EEY94150.1| cysteinyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 473
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 181/499 (36%), Positives = 256/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGQIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII RA + ++I +T++ + +D L C AP P+AT
Sbjct: 64 RYIRNITDIDDKIIARANENG------ESIQQLTARFIEAMNEDAANLGCAAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMISNLVDKGAAYPASNGDVYFEVTKFDKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ LS++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQTYGQKTVDALDQSFVER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV--CKE 399
N D NT A+ L +L +E + L +ILG+ E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHDVDE 409
Query: 400 HLNKNI--------SIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
L +I IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTIWRR 471
>gi|169633852|ref|YP_001707588.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|229558610|sp|B0VS71|SYC_ACIBS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|169152644|emb|CAP01639.2| cysteinyl-tRNA synthetase [Acinetobacter baumannii]
Length = 473
Score = 327 bits (839), Expect = 2e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 255/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T + +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTMRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N WIH GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWIHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGIIDPA 350
VIR ++ +HYR P++F+ L EA+ L+++ + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFVER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
+A+ +D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
K + + IE +Q+R IR+ L +G
Sbjct: 410 FLKSDIGQEALALSDAEIEDFIQQRVDAKKAKDFAKAD-----------SIRQSLLEQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|325121583|gb|ADY81106.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 473
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--NV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------TSKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQKTTETLDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
K + + IE +Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQEALSLSDAEIEDFIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|293608603|ref|ZP_06690906.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|292829176|gb|EFF87538.1| conserved hypothetical protein [Acinetobacter sp. SH024]
Length = 473
Score = 327 bits (838), Expect = 2e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--NV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L CLAP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGAAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
K + + IE +Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|298736162|ref|YP_003728688.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
gi|298355352|emb|CBI66224.1| Cysteinyl-tRNA synthetase [Helicobacter pylori B8]
Length = 465
Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER K F AD+IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|294650979|ref|ZP_06728319.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292823080|gb|EFF81943.1| cysteine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 473
Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats.
Identities = 180/499 (36%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF + I +YVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII RA + ++I +T++ +D L C+AP P+AT
Sbjct: 64 RYIRNITDIDDKIIARANENG------ESIQQLTARFIDAMNEDAANLGCVAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I ++ G AY +N ++ F+ S YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG+GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEATTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------PA 350
VIR ++ +HYR P++F+ L EA+ LS++ + + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV--CKE 399
+A+ +D NT A+ L +L +E + L +ILG+ E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQATVLYSTLRQLTNILGLVQHNVDE 409
Query: 400 HLNKNI--------SIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
L +I IE L+Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTIWRR 471
>gi|108563291|ref|YP_627607.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
gi|123373736|sp|Q1CSY9|SYC_HELPH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|107837064|gb|ABF84933.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPAG1]
Length = 465
Score = 327 bits (838), Expect = 3e-87, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 235/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+++I+ ++ AY +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLENMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L ++ L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADRIREELLNRKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|237752694|ref|ZP_04583174.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229376183|gb|EEO26274.1| cysteinyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 467
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 162/483 (33%), Positives = 251/483 (51%), Gaps = 51/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY++ +++ F+ I P+ +R+YVCGPTVYD +H+G+AR IVFD+L R+L
Sbjct: 1 MKIYDSHKKEKVPFEPIIPNEVRLYVCGPTVYDDSHLGHARSAIVFDLLRRVLIENGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + +N TDIDDKII +A Q N +I IT T++++ + L + +P+
Sbjct: 59 KVIFAKNFTDIDDKIINKATQN------NCSIEEITQTYTKRYLDEMQALGVMRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++ M +IQN++ AY+ N ++ S YG+ S +I E + +RV
Sbjct: 113 ATENLEAMFAMIQNLLDKKIAYQTPNGDVYLSVSKDREYGNLSG-RIAELESQSRVQNSE 171
Query: 184 HKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYL----GKVFDIHGGGL 238
K + DF LWK + + G++SP+G+GRPGWHIECSAM +L DIHGGG
Sbjct: 172 QKHDSKDFALWKSYKGIGDVGYDSPFGKGRPGWHIECSAMIKEHLALKGDYAIDIHGGGT 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE Q+ CAD + A WIHNGF+ + G KM+KS GN I + L
Sbjct: 232 DLLFPHHENEACQTRCADN-QVLAKYWIHNGFVTINGEKMAKSLGNSFFIKDALA----- 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
++ ++R +L THYR ++F+ + L ++ L + + I+
Sbjct: 286 --NYDGEILRFYLLSTHYRAGLNFSEEDLLASKKRLDRLYRLKKRLAILPKKTIPTSLDN 343
Query: 351 -----VLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGI-- 394
L AL +DLN A+ L + + D A +LGI
Sbjct: 344 AFKTAFLDALNDDLNISKALSVLDDFIANANEQLDSKQNDKIPQIYANLELVAKVLGIGI 403
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E K +++++ IE L+++R K+K F +AD IR++L +KG + D N
Sbjct: 404 KDCFEYFKLGVSEDLKTEIENLLKKRAEFKKIKDFQNADKIREELRNKGIEIMDTPNGCI 463
Query: 451 GQR 453
++
Sbjct: 464 WEK 466
>gi|291529941|emb|CBK95526.1| cysteinyl-tRNA synthetase [Eubacterium siraeum 70/3]
Length = 472
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 158/486 (32%), Positives = 235/486 (48%), Gaps = 52/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L K EF + MY CGPTVY FAHIGN R I+ DVL + LRY +
Sbjct: 1 MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F +D T+L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFEDCTKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT+ I I +I ++I G+AYEA I FDTS + Y F+ K ++
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E W+SPWG G PGWHIECS +S +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D FPHH NEIAQS K N W H LN KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L + + + R L++HYR+ + FT + L A+ K
Sbjct: 292 LL------ESKGYDPVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAEQ 345
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
+ +A+ ND+NT AI AL+ + + T L + +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLSL 405
Query: 397 CKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ N + I +L ++R K K F+ AD +R ++ + G+ +E+ +
Sbjct: 406 IEKAKAVNEKPADTNDELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465
Query: 448 PDNGQR 453
++
Sbjct: 466 GTVIKK 471
>gi|126458659|ref|YP_001054937.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
gi|189082072|sp|A3MS54|SYC_PYRCJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|126248380|gb|ABO07471.1| cysteinyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 473
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 164/471 (34%), Positives = 238/471 (50%), Gaps = 42/471 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYNT R++ EF P R YVCG T YD H+G+ R + FD+ R L E
Sbjct: 1 MRIYNTATRQVEEFTTYTPGLARGYVCGITPYDHVHVGHGRVYVFFDMFRRYLESLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII +AR+E + + +F + + RL PR
Sbjct: 60 -VRLVVNFTDIDDKIIAKAREEF-GPEAYKRWREVPERYIAEFFEVSKRLFIKPAYAYPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ M+ I ++ G AY + + F+ +PNYG SR++I+E G RV +
Sbjct: 118 VTENVDDMVKWISALVEKGFAYVAPDGSVYFEVGKVPNYGVLSRQRIEELIAGARVEPEP 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK +P EP W SPW GRPGWH+EC MS+ +LG FD HGGG DLIFP
Sbjct: 178 GKRNPLDFALWKSWSPGEPWWNSPWCPGRPGWHLECVVMSTKHLGVPFDFHGGGADLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIA + ++ A WIH G+L + G KMSKS GN IT+ E+L +
Sbjct: 238 HHENEIAIAKAYFGVDNFAKYWIHVGYLTVRGEKMSKSLGNVITLREVLS-------KYS 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GI 346
+RLA M+HYR+P++F+ + L +AE ++ G
Sbjct: 291 GEALRLAYAMSHYRKPMEFSFELLDQAEDIVKTLYTAYDELSQAVADAGDADRERVDIGN 350
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARES-------------TKNHDLLPIFNASAHILG 393
A SAL +D +T A+Q L+ A+ +L + A ++G
Sbjct: 351 FKAAFYSALEDDFSTPEAVQQLYAAAKYIISTVLHKVDKLSKNTVLAILADYVKMADVIG 410
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ +E + K + A++ LV+ R L + + ADY+R++ ++ G L D
Sbjct: 411 VLERRE-VAKEVEEAVKALVEVRARLRSERLYQLADYVRERAKALGAELHD 460
>gi|307720859|ref|YP_003891999.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
gi|306978952|gb|ADN08987.1| cysteinyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
Length = 466
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 160/481 (33%), Positives = 244/481 (50%), Gaps = 48/481 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ I++++++ +F + + +YVCGPTVYD AH+G+A+ +VFD+L R+LR +
Sbjct: 1 MHIFDSVQKTKRKFTPLKEGKVSLYVCGPTVYDDAHLGHAKSALVFDLLTRVLRANGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITDIDDKII++A ++ I IT T+ F + + PT +P+
Sbjct: 60 -VTYARNITDIDDKIIKKAIEQKKE------IKEITDFYTETFHTEMEAIGVKRPTIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT+ + M+ LIQ +I GHAY+ ++ FDT+S Y S S R +E+ RV
Sbjct: 113 ATHSLEAMVDLIQKLIDKGHAYQTPEGDVYFDTASDSEYLSLSHRMQNEEDKQERVVSST 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGL 238
+KKN ADF LWK + SP+G GRPGWH+ECSAM + DIHGGG
Sbjct: 173 YKKNHADFALWKSVKDNSITFSSPFGAGRPGWHLECSAMIEKHLAYRDTPFAIDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ+ C +N W+HNGF+N+EG KMSKS GN + + L
Sbjct: 233 DLLFPHHENEAAQTRCGTN-HALSNYWMHNGFVNIEGEKMSKSLGNSFFLKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
+ + V+R +L THYR +F Q L ++ L K + + +
Sbjct: 286 -KEYDGEVLRFYLLSTHYRSNFNFNTQDLAASKKRLDKLYRLKKRLFGLAPCSDETTFKK 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHILG----- 393
+L AL +D+N SA+ + ++ + + D+ + +LG
Sbjct: 345 ELLEALNDDMNVSSALALIDEMISGANETLDISGKHKQLKRETMANLAYIEELLGFGVKN 404
Query: 394 -IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + ++++ I L++ R K F AD +R ++ S G L D +
Sbjct: 405 PFEYFQFGIDEDTKGKINFLIKARNGAKAEKNFELADTLRDKILSYGVNLMDTPQGTFWE 464
Query: 453 R 453
+
Sbjct: 465 K 465
>gi|213019206|ref|ZP_03335013.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|212995315|gb|EEB55956.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 440
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 192/449 (42%), Positives = 260/449 (57%), Gaps = 38/449 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG VTYVRNITDIDDKII A ++
Sbjct: 1 MYVCGPTVYDTAHIGNARSIVVYDVLFRLLKFCYG--KVTYVRNITDIDDKIINAANEK- 57
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N I I+ T+ F +D + C PT++P+AT +I +I LI++++ GHAYE
Sbjct: 58 -----NSNIESISKYYTKTFHEDMESINCAEPTYEPKATENIDNIIKLIESLLQAGHAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
+N + F S P YG S +KIDE G+RV +KK+P DF+LWK + +
Sbjct: 113 SNKHVYFSVESYPEYGVLSGKKIDELNYGSRVEVGENKKHPGDFVLWKPANETDYKLSSH 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL FPHHENEIAQS A A
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAESTFAK 232
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNGFL + KMSKS N + + +LL++ VIR A+L THYR+P+D+T
Sbjct: 233 YWVHNGFLTVNEEKMSKSLFNIVKVRDLLDS------GIKGEVIRYALLKTHYRKPLDWT 286
Query: 324 VQRLTEAEILLSKWP------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
++E++ L+K+ S + + AL NDLN A+ LH++A E K
Sbjct: 287 ENVISESQETLNKFYRLLRSTCIEESDTEVSKDFIEALKNDLNIPEAVAILHEMATEINK 346
Query: 378 NHD------LLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
+ L F SA +GI + + IE+L+ R + + K + +A
Sbjct: 347 TSNEYEKLKLTKKFVKSARFIGILESSYQEWFASGVSHQEIERLIDLRKVAKQNKDYDTA 406
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRW 457
D IR+QL+ G + D ++ T W
Sbjct: 407 DKIREQLKQMGVTISDNEDGT-----TTW 430
>gi|296242820|ref|YP_003650307.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296095404|gb|ADG91355.1| cysteinyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 481
Score = 327 bits (837), Expect = 3e-87, Method: Composition-based stats.
Identities = 172/491 (35%), Positives = 243/491 (49%), Gaps = 54/491 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M ++KIYNTL + + + Q ++P ++MYVCGPTVYD H+G+ R +++DV R L
Sbjct: 1 MLPELKIYNTLTKTVEKIQPVEPGLLKMYVCGPTVYDSTHVGHGRAYVMYDVFKRYLNSR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +V NITDIDDKII RAR E N I T+++++ L
Sbjct: 61 GY--HVIHVMNITDIDDKIINRARDE------NRDWMEIVETYTKEYLEALNSLNVQ-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PR T HI ++I IQ +I GHAY + + FD ++ +YG S R + E
Sbjct: 112 HHPRVTQHISEIIEFIQRLIEKGHAYVTPSGSVYFDVNTYEDYGRLSGRLVKEAWSQEPD 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KKNP DF LWK + P EP WESPWGRGRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 FLSE-KKNPYDFALWKAAKPGEPFWESPWGRGRPGWHIECSVMSTRYLGERFDIHGGGTD 230
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS A +IW+H G + + KMSKS N + I E++
Sbjct: 231 LIFPHHENERAQSESALGSRPWVSIWMHVGMVMVGADKMSKSLKNIVPIKEVV------- 283
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVLSA 354
+ W +R LM+HYR+P+ F+ + L A L + Q S+ + ++P S
Sbjct: 284 KKWGGRTLRYWYLMSHYRKPVSFSEESLEIASEHLRRLNQVSSLLQKLWREAVEPHRASD 343
Query: 355 LY-------------------NDLNTVSAIQALHKLARESTKN----------HDLLPIF 385
D NT A+ +L++ ++ + + I
Sbjct: 344 EDLKILRNLLKAHYSFHVALSEDFNTPEAVASLNEFTTIVFRDIQYNPKYILVNTAVRIL 403
Query: 386 NASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
++ G+ + +++ I+ LV R L K + AD IR +L G L
Sbjct: 404 RDFDNVFGVLETAPEVLVEEDVDPYIKILVDVRKELRNRKMYDLADMIRSELGKLGVTLS 463
Query: 444 DYKNPDNGQRM 454
D + R+
Sbjct: 464 DKGSETTWIRV 474
>gi|305663603|ref|YP_003859891.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
gi|304378172|gb|ADM28011.1| cysteinyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
Length = 476
Score = 327 bits (837), Expect = 4e-87, Method: Composition-based stats.
Identities = 165/489 (33%), Positives = 241/489 (49%), Gaps = 57/489 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+I F+ I+P ++ Y CGPTVYD+ H+G+ R + FD + R L+
Sbjct: 1 MLITIYNTLSRRIEPFEPINPPLVKAYFCGPTVYDYTHLGHIRAYLAFDFIKRYLKLRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ + +++NITDIDDKII+RA +E S +T K + +++ L H
Sbjct: 61 D--IIHIQNITDIDDKIIKRANEEGVS------WKELTDKYIRDYLQILNALKIEIHLH- 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T HI ++I I+ +I G+AY + + FD S + +YG S RK E+
Sbjct: 112 PRVTEHINEIIEFIKGLIDKGYAYVAPSGSVYFDISLVNDYGKLSGRKKAEEWRQEEEFL 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK S P EP WESPWGRGRPGWH EC+ MSS YLG FD+HGGG DLI
Sbjct: 172 SE-KRNPYDFALWKASKPGEPFWESPWGRGRPGWHTECAVMSSKYLGTQFDVHGGGQDLI 230
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIA + ++ WIH G+L + G KMSKS GN I + +
Sbjct: 231 FPHHENEIAMAEALYGVKPWVKYWIHVGYLTIRGEKMSKSLGNVIYAKDAI-------NK 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----------- 350
+ ++RL +HYR+ ++ + + L + S+ + I
Sbjct: 284 YSPEILRLWAFSSHYRKQVEVSDEVLNSYRDVYSRLVLAVETLKKIIKQENIKYSLKEDE 343
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA-------- 389
A+ +D NT A +A+H+L K + F +
Sbjct: 344 INILKKLEMIEIEFHKAMSDDFNTPKAFEAVHELTSLVFKEIERYETFELALRAYEILLN 403
Query: 390 --HILGIEVCKEHLNKNISIA-IEKLVQE----RLILLKMKKFSSADYIRKQLESKGFIL 442
++G+ + + I IEKL++ R L K K++ +D IR++L G +
Sbjct: 404 FNKVIGVLDKYFEESITVDIEMIEKLIELILKVRTELRKRKEYELSDKIRQELLMLGIKV 463
Query: 443 EDYKNPDNG 451
DYK+
Sbjct: 464 FDYKDGSKW 472
>gi|11387154|sp|Q9RTT6|SYC_DEIRA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 498
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 166/507 (32%), Positives = 240/507 (47%), Gaps = 72/507 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I +Y+T++R+ F P + MY+CGPTVY AH+G+A+ + FDV+ R L ++
Sbjct: 15 NPNITLYDTMQRQKVPFVPGTPGYVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRALTHFG 74
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YV NITD+ +DK+ RAR E + K F +D
Sbjct: 75 YQ--VRYVSNITDVGHLLNDADEGEDKLQARARLEQLE------PMEVADKYFWSFFRDM 126
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L L P+ PRAT HI + I LI+ +I GHAYE+ + FD S P YG S RK+D
Sbjct: 127 DALNVLRPSINPRATGHIQEQIKLIEELIEKGHAYESAGSVYFDVRSWPEYGKLSGRKLD 186
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+Q+ GTR + K++P DF LWK++ P W+SPW G PGWHIECSAMS YLG+
Sbjct: 187 DQEEGTREAVRDEKRDPRDFALWKKAEPEHLMRWDSPWSVGFPGWHIECSAMSLKYLGEG 246
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGGLDL FPHHE EIAQ+ A A W+HN L + G KMSKS GNF TI +
Sbjct: 247 FDIHGGGLDLQFPHHEAEIAQAEAAGHH--FARYWMHNNMLTIGGEKMSKSKGNFTTIQD 304
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----- 345
+L + + V+R ++ +HYR + + A + +T
Sbjct: 305 IL-------KKYDPMVVRFLLVSSHYRSVTEMNEEAFASAANGYRRLSETLHEIERRLKD 357
Query: 346 --------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------- 380
A+ +D NT A+ +L L E +
Sbjct: 358 APAGSDTALDSKIAARVTEFEDAMRDDFNTPKAVASLFGLTGELNTALNAGPVGRDTLER 417
Query: 381 LLPIFNAS-AHILGIEVC-------KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + +LG+ + I ++ +++ R K+++ AD +R
Sbjct: 418 ARDAYRSLGGDVLGLFAETGSAASVAQDDASVIDALMDLVLKARQNYRLQKQYAEADELR 477
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQ 459
+ L G +ED K+ RWK+
Sbjct: 478 ETLGKAGITVEDTKDGA------RWKR 498
>gi|121535688|ref|ZP_01667492.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121305719|gb|EAX46657.1| cysteinyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 370
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 139/347 (40%), Positives = 194/347 (55%), Gaps = 15/347 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL ++ EF +P ++MYVCG T Y+ HIGNARP I +DV+ R L +
Sbjct: 1 MALRVYNTLTKQKEEFVPREPGKVKMYVCGVTPYNHPHIGNARPFITWDVIRRYLEHRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+N TDIDDKII A QE + I ++ + + +L
Sbjct: 61 --AVFHVQNFTDIDDKIINTANQEGVT------WDTIANRYIAAYFEVMDKLNVRRAHVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++HI +I ++Q +I G+AY ++ + YG S R +++ K G R+
Sbjct: 113 PRVSDHIGDIIAIVQRLIDKGYAYTVGGDVYYSVEKFAPYGQLSGRSLEDMKAGARIDVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + P EP W+SPWG GRPGWHIECSAM+ YLG FD HGGG DLIF
Sbjct: 173 ERKRHPMDFALWKSAKPGEPAWDSPWGPGRPGWHIECSAMALKYLGNGFDFHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS W+HNGF+ + KMSKS GNF + ++L +
Sbjct: 233 PHHENEIAQSEAYTGEAPFVRYWLHNGFITVNEEKMSKSLGNFFLVKDILA-------HY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
P V+R +L THYR P+DF+ +RL EA L + + ++
Sbjct: 286 PPEVLRFFILSTHYRSPLDFSDERLAEAGRSLERLRTAVHNIRQLEK 332
>gi|139438524|ref|ZP_01772040.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
25986]
gi|133776063|gb|EBA39883.1| Hypothetical protein COLAER_01033 [Collinsella aerofaciens ATCC
25986]
Length = 488
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 178/500 (35%), Positives = 245/500 (49%), Gaps = 70/500 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IYN+ K EFQ I+ +RMYVCGPTVYD HIGNAR I FDV+ R L E
Sbjct: 1 MRIYNSATHKKEEFQPIESGKVRMYVCGPTVYDNIHIGNARTFISFDVIRRWLIASGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ +N+TD+DDKII+RA ++ + + + ++ + +F+ L P +PR
Sbjct: 60 -VTFAQNLTDVDDKIIKRANEQGRTA------AEVATEFSDKFIGVMRAANVLDPDVRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I MI +I+ +I GHAY N ++ F S PNYG S R ID+ +G R+ E
Sbjct: 113 ATKEIGPMIAMIKTLIEQGHAYAADNGDVYFAVRSDPNYGQVSGRNIDDLMVGARIEENE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K +P DF LWK + P EP W SPWG GRPGWH EC+AM YLG DIHGGG DL FP
Sbjct: 173 DKNDPLDFALWKAAKPGEPSWPSPWGEGRPGWHTECAAMVHRYLGTPIDIHGGGSDLAFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ CA + +N W+H G L ++G KMSKS GNF T+ E+LE
Sbjct: 233 HHENECAQATCAWH-QGFSNTWMHTGMLLVDGEKMSKSLGNFFTLAEVLEQH-------S 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
A +RL ML T YR P+DF+ +RL AE L++ T +
Sbjct: 285 AAALRLLMLQTSYRSPLDFSWERLEGAENSLTRIAGTVENLRWAANHATADADEAASEAF 344
Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNA 387
+ + +D NT A+ A+ E + +
Sbjct: 345 AAKAAETRAAFMECMDDDFNTAGAMGAVFGFVTECNQYLEQAGDAADKAAALAAADTLAE 404
Query: 388 SAHILGIEVCKEHLN-----------------KNISIAIEKLVQERLILLKMKKFSSADY 430
LG+E+ + + ++ A K+++ R K + AD
Sbjct: 405 LLDTLGVELPEPKVELPLGLLGVAAGLVAYTGDDVDEAAAKILEARAEARAAKNWDLADA 464
Query: 431 IRKQLESKGFILEDYKNPDN 450
IR QL+ G +ED
Sbjct: 465 IRDQLKDLGLTIEDTAAGTR 484
>gi|196232145|ref|ZP_03131000.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
gi|196223867|gb|EDY18382.1| cysteinyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
Length = 466
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 158/481 (32%), Positives = 234/481 (48%), Gaps = 52/481 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
I+++NT R++ EF +DP ++MY CGPTVY+ AHIGN R + D+L R L
Sbjct: 1 MGIRLFNTYTRQLEEFTPLDPAGQQVKMYTCGPTVYNHAHIGNFRAYLFEDLLQRHLEAR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V V N+TD+DDK I +R+ ++ T+ F +D L
Sbjct: 61 GYQ--VERVMNLTDVDDKTIRNSREAG------RRLADFTAIYKDAFFQDVDTLRIKRAQ 112
Query: 121 HQPRAT--NHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
H P AT +I +MI +IQ + G AY+A + + F S P+YG + +DE +
Sbjct: 113 HFPAATEPRYIERMISMIQQLESQGIAYQAEDKSVYFRLSKFPDYGKLAHLNLDELRPSG 172
Query: 178 RVPEKYHKKNP-ADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
R+ ++K DF LWK + W+SPWGRGRPGWHIECSAM++ LG DIH
Sbjct: 173 RIANDEYEKESIGDFALWKAWDEKDGDVAWDSPWGRGRPGWHIECSAMATALLGPEIDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG+D IFPHHE EIAQS C +K W+H L ++G+KMSK GNF T+ +L+E
Sbjct: 233 CGGVDNIFPHHEAEIAQSECCTG-KKFVRYWLHCAHLMVDGQKMSKKLGNFYTLRDLIE- 290
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------ 342
+ + R A+L +YR P++FT+ L A L++ +
Sbjct: 291 -----KGFTGREARYALLTVNYRLPLNFTLPGLESARASLARIDEWVDRLTAHAAGASPT 345
Query: 343 --SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
+AL DLN A+ L L RES + LL +
Sbjct: 346 ATPLSDFTEKFFAALDEDLNISGALAPLFDLIRESNSALNRSELSPAEAAQLLADWRRID 405
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG E I + LV++R K++ +D +R ++ +KG++++D K
Sbjct: 406 SVLGF----EREAAAIPADVLALVEQRQQARADKEWKKSDELRDEILAKGWVVKDTKEGP 461
Query: 450 N 450
Sbjct: 462 K 462
>gi|317123115|ref|YP_004103118.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315593095|gb|ADU52391.1| cysteinyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 518
Score = 326 bits (836), Expect = 4e-87, Method: Composition-based stats.
Identities = 156/517 (30%), Positives = 225/517 (43%), Gaps = 74/517 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL + F+ ++P +RMY CGPTVYD+ H+GN R + FDV+ L Y
Sbjct: 1 MGIQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N TDIDDK+I RA + ++ + + + + +D L +
Sbjct: 61 --RVRYVQNFTDIDDKLIRRAAERGITV------KELADEQIRAYFEDADALGIVRADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + I +I LI+ +I G+AY A ++ FD +YG S +K ++ G RV
Sbjct: 113 PRVSEKIGAIIALIRRLIDQGYAYVAGGDVFFDVERFRHYGKLSGQKTEQLLAGARVEAA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF LWK P EP W+SPWG GRPGWHIECSAM+ LG+ DIH GG DL+F
Sbjct: 173 ENKRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGQTIDIHSGGSDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL----------- 291
PHHENEIAQS A + A W+H + + G++M KS GNF + +L
Sbjct: 233 PHHENEIAQSEAATG-KPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLRARYHPEAIRL 291
Query: 292 --LETKKFGGRSWPAPVI--------RLAMLMTHYREPIDFTVQRLT------------- 328
L + + RLA + H + T
Sbjct: 292 FILSAHYRNPLEFSLEALDQAERARQRLANFIAHLEHLLQVTAPAEAGGIPDDLGARGAG 351
Query: 329 -------------------EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
+ +A+ +D NT A+ AL
Sbjct: 352 ATGAAEDGGAAGSAGTARAAGATAATAGVDWPARLARARAEFEAAMDDDFNTADALAALF 411
Query: 370 KLARESTKN----------HDLLPIFNASAHILGIE--VCKEHLNKNISIAIEKLVQERL 417
LAR+ K L + L + V +E + ++ LV+ R
Sbjct: 412 TLARDGHKVLGPDSPRPWIQATLDLVRELGGPLRLFRTVAREEPAGDAQALLDLLVEVRQ 471
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
++ + AD IR +L G+ LED +R
Sbjct: 472 YARSVRDYELADRIRHRLAELGYWLEDTPAGTRVRRG 508
>gi|307637574|gb|ADN80024.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 908]
gi|325996165|gb|ADZ51570.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2018]
gi|325997761|gb|ADZ49969.1| Cysteinyl-tRNA synthetase [Helicobacter pylori 2017]
Length = 465
Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 236/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|225468584|ref|XP_002263880.1| PREDICTED: hypothetical protein isoform 2 [Vitis vinifera]
Length = 484
Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats.
Identities = 158/489 (32%), Positives = 239/489 (48%), Gaps = 60/489 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNT+ ++ F+ + + MYVCG T YD +H+G+AR + FDVLYR L++ E
Sbjct: 6 ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRYLQHLGYE 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN TD+DDKII RA + + + ++S+ Q+++ D T L CL PT QP
Sbjct: 66 --VTYVRNFTDVDDKIIRRANE------LGENPLTLSSRFCQEYLDDMTDLQCLTPTQQP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R ++H+ Q+ +I II + AY + ++ F PNYG S RK+++ + G RV
Sbjct: 118 RVSDHMDQIKDMITQIINNDCAYIIDGDVYFAVDKSPNYGRLSGRKLEDNRAGERVAVDS 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL FDIHGGG+DLIFP
Sbjct: 178 RKRNPADFALWKAAKPDEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQSC A + +++ +S N+ + ++
Sbjct: 238 HHENEIAQSCAACQESNITDLYHPLALRYFLLGTHYRSPVNYSIAQLEIASEA------- 290
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
V + + + + + + + P + + + +DL+T
Sbjct: 291 --VFYIYQTLRDCEDTLSPFQEVNGQNVCIT---PAAKDCISKLQTDFQTKMSDDLSTPH 345
Query: 364 AI-QALHKLARESTKNHDLL--------------------PIFNASAHILGI-------E 395
+ +L + R ++L +LG+ E
Sbjct: 346 ILNASLQEALRFINSGLNMLKKKQQKQQQLSAVQSLTELEKEVKGVLSVLGLLSTLAYSE 405
Query: 396 VCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
V ++ K + + L++ER + K K FS D IR L SKG L D
Sbjct: 406 VLQQLKGKALRRAGMIEDDVLHLIEERALARKNKNFSRGDQIRADLASKGIALMD----- 460
Query: 450 NGQRMTRWK 458
+ T W+
Sbjct: 461 -VGKETIWR 468
>gi|295101451|emb|CBK98996.1| cysteinyl-tRNA synthetase [Faecalibacterium prausnitzii L2-6]
Length = 465
Score = 326 bits (836), Expect = 5e-87, Method: Composition-based stats.
Identities = 174/493 (35%), Positives = 250/493 (50%), Gaps = 73/493 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL R+ EF P R+YVCGPTVY++ HIGNARP+IVFD L R L Y
Sbjct: 1 MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV NITDIDDK+I++ ++E S + + + +++KD L C PT QPR
Sbjct: 59 KVIYVSNITDIDDKLIKKGQEEGTS------MKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
AT HI Q++ +++++I GHAY N ++ F S P YG S K+D+ + G R
Sbjct: 113 ATEHIQQILDIVKDLIESGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K++PADF +WK + P EP WESP+G GRPGWHIECSAMS +LGK D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS CA+ E A W+HNGF+N++ +KMSKS NF T+ ++
Sbjct: 233 LIFPHHENEIAQSECANGCE-FARYWMHNGFINVDNQKMSKSLHNFFTVRDV-------A 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
+ IR ML YR P+++TV + + L + +
Sbjct: 285 NLYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHI 391
+A+ +DLNT A+ A+ L ++ F+ +
Sbjct: 345 KEKAEEAKKKFCTAMDDDLNTPDALAAVFDLVKDINTLSAASSKAALEAGAAAFDEITGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
LG+ ++ + + +LV++R IR QL G+
Sbjct: 405 LGLMYNRKK--DEVPAEVTELVEKRAAAKKAKDWAAAD-----------AIRAQLTGMGW 451
Query: 441 ILEDYKNPDNGQR 453
++D +
Sbjct: 452 AVKDTAQGPQLSK 464
>gi|89054449|ref|YP_509900.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
gi|109894905|sp|Q28QY7|SYC_JANSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|88863998|gb|ABD54875.1| cysteinyl-tRNA synthetase [Jannaschia sp. CCS1]
Length = 453
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 182/456 (39%), Positives = 256/456 (56%), Gaps = 17/456 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I + N+ RK+ Q I+P + +Y+CGPTVYD AH+GNAR +VFD L+RLLR+ YG
Sbjct: 3 EIHLKNSKSRKVELLQPIEPGRVSLYLCGPTVYDRAHLGNARSAVVFDQLFRLLRHVYGA 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ VT+VRN TD+DDKI RA E I+ +T++ +Q ++ DT L L P H P
Sbjct: 63 ENVTFVRNFTDVDDKINARALAEGRE------IADLTAETSQWYLDDTRALGVLDPNHMP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT +I +M+ I+++I G AY + +F S +YG S R +D+ G RV
Sbjct: 117 RATEYIAEMVAFIEDLIAKGFAYARDGHALFRVRSFDDYGKLSGRSVDDMIAGARVEVAP 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S+ PGW+SPWGRGRPGWHIECSAM+ LG+ FDIHGGG DL+FP
Sbjct: 177 YKEDPMDFVLWKPSSDDIPGWDSPWGRGRPGWHIECSAMAHALLGEQFDIHGGGADLMFP 236
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQSC A ANIW+HN L +EG+KMSKS GNF T+ +LL+ + P
Sbjct: 237 HHENEVAQSCAAGHG--FANIWMHNEMLQVEGKKMSKSLGNFFTVRDLLD------QGVP 288
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---KGIIDPAVLSALYNDLN 360
VIR ML THY +P+D+T ++ EAE L KW + P ++ +L +DLN
Sbjct: 289 GEVIRFVMLSTHYGKPMDWTEKKRAEAEATLRKWYAALRQSVAEQEATPHLVDSLADDLN 348
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
T AI LH + + + E +++ + R +
Sbjct: 349 TALAITTLHGMYETGNFGPLAGGLRLLGLWSGTVPDWSEIAEVDLTYFAGRFSSARAEAM 408
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
K F+ D ++ L + G + K+
Sbjct: 409 VTKDFTDVDALKSALTAAGVEVRMSKDGVELVPGPT 444
>gi|226951456|ref|ZP_03821920.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226837804|gb|EEH70187.1| cysteinyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 473
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 180/499 (36%), Positives = 258/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF + I +YVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRNEGQIDIYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII RA + ++I +T++ +D L C+AP P+AT
Sbjct: 64 RYIRNITDIDDKIIARANENG------ESIQQLTARFIDAMNEDAADLGCVAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I ++ G AY +N ++ F+ S YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMISTLVNKGAAYPASNGDVYFEVSKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG+GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPAWASPWGKGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEATTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------PA 350
VIR ++ +HYR P++F+ L EA+ LS++ + + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTALSRFYHSFKAYQQVYGQKTVDALEQSFVER 349
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEV--CKE 399
+A+ +D NT A+ L +L +E + L +ILG+ E
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQAEQAMVLYSTLRQLTNILGLVQHNVDE 409
Query: 400 HLNKNI--------SIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
L +I IE L+Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQDALALSDTDIEDLIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTIWRR 471
>gi|296453539|ref|YP_003660682.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
JDM301]
gi|296182970|gb|ADG99851.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum
JDM301]
Length = 546
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 153/539 (28%), Positives = 226/539 (41%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILDKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDANGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 202
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+C A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTAIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAESPE 493
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + I + + R K K F+ AD IR L G +ED G + + W K
Sbjct: 494 HAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWSLK 546
>gi|299770841|ref|YP_003732867.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
gi|298700929|gb|ADI91494.1| cysteinyl-tRNA synthetase [Acinetobacter sp. DR1]
Length = 473
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 179/499 (35%), Positives = 257/499 (51%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--NV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L C AP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY AN ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPAANGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQMYGQTTTETLDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI------E 395
N D NT A+ L +L +E + L +ILG+ +
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRYLTNILGLVQHNVDD 409
Query: 396 VCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
K + + IE +Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|317126032|ref|YP_004100144.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
gi|315590120|gb|ADU49417.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
Length = 492
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 146/492 (29%), Positives = 223/492 (45%), Gaps = 59/492 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++T R++ F + + MY+CG T HIG+ R + FDVL R L
Sbjct: 1 MSLHLFDTATRELRAFVPRESGKVGMYICGLTTQGAPHIGHIRFAVAFDVLRRWLETA-H 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT +RN+TDIDDK++ +A + +T +N + L T++
Sbjct: 60 DYHVTLIRNVTDIDDKVLRKAADAG------EDWFALTYRNERLTTDALDALGVKPATYE 113
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P M+ L++ +I GHAY A ++ FD S P+YGS S + +D+
Sbjct: 114 PRATGHVPDMVALMETLIEKGHAYAAPDGSGDVYFDVRSWPDYGSLSNQSLDDMVAAEDA 173
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK EP W +P+G GRPGWH+ECSAM+ +LG FDIHGG
Sbjct: 174 DPR-GKRDPRDFALWKGRKSDEPLSASWPTPFGSGRPGWHLECSAMARRWLGDEFDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE AQS A A W+HN ++ ++G KM KS GN + + LLE +
Sbjct: 233 GIDLRFPHHENEQAQSRAAGLG--FARYWLHNAWVTVKGEKMGKSLGNALEVRHLLEHTR 290
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK------------ 344
V+R + HYR I++ L EA + +
Sbjct: 291 -------PLVLRYYLTAAHYRSTIEYHSGSLDEAAAAVERIEGFLERAARRGEITSPTDA 343
Query: 345 ----GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHI 391
++ P + A+ +DL A+ A+H R + A +
Sbjct: 344 AAARAVLPPEFVEAMDDDLGVSGALAAVHDTVRAGNVALEEGDDDAALAAAVRVVAMTDV 403
Query: 392 LGIEVCKEHL-----------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
LGI + + + ++ER + + F+ AD IR +L + G
Sbjct: 404 LGINPLAPNWATSQDATTTAVEVALDALVRARLEERQSARQERDFARADAIRDELAAVGV 463
Query: 441 ILEDYKNPDNGQ 452
+ D
Sbjct: 464 AITDTPAGAQWA 475
>gi|210135076|ref|YP_002301515.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
gi|226710843|sp|B6JMA7|SYC_HELP2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|210133044|gb|ACJ08035.1| cysteinyl-tRNA synthetase [Helicobacter pylori P12]
Length = 465
Score = 326 bits (835), Expect = 5e-87, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 237/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI V
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGVKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|116073130|ref|ZP_01470392.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
gi|116068435|gb|EAU74187.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9916]
Length = 496
Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats.
Identities = 169/515 (32%), Positives = 242/515 (46%), Gaps = 78/515 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ N+L + F+ ++ +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MPLRFTNSLTSRTEAFEPLEAGKATIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV+N TDIDDKI+ RA +E S + ++ +N + F D RL L
Sbjct: 61 D--VTYVQNYTDIDDKILNRANEEGSS------MEAVSERNIEAFEIDMGRLNILPADRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
PRAT I + LI + G AY ++ ++ FD S +YG S R +EQ+ T
Sbjct: 113 PRATGCIDGIQKLISELEAKGAAYSSDGDVYFDISKAKDYGKLSGRDPNEQQQGASGRTA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK EP W+SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DGEESRKRHPFDFALWKGVKEGEPSWDSPWGPGRPGWHIECSAMVRQELGTTIDIHLGGG 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A+ AN+W+HNG +N+ G KMSKS GNF TI LL++
Sbjct: 233 DLTFPHHENEIAQSETANGT-TLANLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------------- 337
+RL +L HYR+P+DFT + L A
Sbjct: 288 --GVSPMTMRLFVLQAHYRKPLDFTAEALEAATTGWKGLNAALGLGRVHAQSLGWPVAAV 345
Query: 338 ---------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR--------------- 373
++ ++A+ +DLN+ A+ L LAR
Sbjct: 346 QDQGAQLAGDAVDGDLAVMKERFVAAMDDDLNSSGALAVLFDLARPLRGLANRLVRGDQP 405
Query: 374 -ESTKNHDLLP----IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM----KK 424
++ + +LL + A ++G+ ++ A + + + K K
Sbjct: 406 EQAPADLELLQKRWQLLRELAAVVGLREEQQQTEAAGDGADDAAIDAAIAARKAAKAAKN 465
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
F+ AD IR L ++G L D +T W++
Sbjct: 466 FAEADRIRDALTAQGIELIDKPGG-----ITEWRR 495
>gi|291556370|emb|CBL33487.1| cysteinyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
Length = 472
Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats.
Identities = 156/486 (32%), Positives = 235/486 (48%), Gaps = 52/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L K EF + MY CGPTVY FAHIGN R I+ DVL + LRY +
Sbjct: 1 MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F +D T+L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFEDCTKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT+ I I +I ++I G+AYEA I FDTS + Y F+ K ++
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIEKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E W+SPWG G PGWHIECS +S +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDAQELKWDSPWGVGYPGWHIECSCISMKHLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D FPHH NEIAQS K N W H LN KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L + + + R L++HYR+ + FT + L A+ K
Sbjct: 292 LL------ESKGYDPVIYRFFCLLSHYRKSLVFTYENLDNAKGAYEKLVAKIAQLLKAEQ 345
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
+ +A+ ND+NT AI AL+ + + L + +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADATPATKLALIADFDKVLSLSL 405
Query: 397 CKEHLN---------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ + + + I +L ++R K K F+ AD +R ++ + G+ +E+ +
Sbjct: 406 IEKAKSVNEKPADTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465
Query: 448 PDNGQR 453
++
Sbjct: 466 GTVIKK 471
>gi|62185411|ref|YP_220196.1| cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
gi|81312439|sp|Q5L546|SYC_CHLAB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|62148478|emb|CAH64248.1| putative cysteinyl-tRNA synthetase [Chlamydophila abortus S26/3]
Length = 476
Score = 326 bits (835), Expect = 6e-87, Method: Composition-based stats.
Identities = 158/486 (32%), Positives = 240/486 (49%), Gaps = 52/486 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ + +YNT R F + +++Y CGPTVYD+AHIGN R I D+L R+L +
Sbjct: 8 RQNLYLYNTASRTKELFSPSNDP-VKLYTCGPTVYDYAHIGNFRTYIFEDLLKRIL--LF 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +V NITD+DDK + A + N ++ T+ Q F KD L L
Sbjct: 65 FGYSVKHVMNITDVDDKTLAGACKN------NISLDTYTAPFIQAFFKDVATLHILPADA 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT++IPQM+ I+ ++ G AY + + F P+YG S+ ++ + +R+
Sbjct: 119 YPRATHYIPQMLVAIRKLLDDGIAYIGQDHSVYFSIKEFPSYGKLSQLQLQNLQCCSRIA 178
Query: 181 EKYHKKNP-ADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +DF+LWK + WESP+G+GRPGWH+ECS M+ LG DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDKHRDGHIYWESPFGKGRPGWHLECSIMAMELLGPSIDIHAG 238
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D IFPHHENEIAQS + + W+H+ L ++G+KMSKS GNF T+ LL+
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP------- 349
R + IR +L +HYR ++FT + L L + + P
Sbjct: 295 ---RGFSGAEIRYMLLQSHYRMQLNFTEEGLMACRQALKRLRDFISRLESPYPESATISE 351
Query: 350 -----------AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
+A+ NDLN +A+ +L ++ D +L I
Sbjct: 352 GIDQCGQRFLQDFSNAIANDLNIAAALASLFDFIHQTNSRIDQSHFTQADSHYVLDILKK 411
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ L I + +LV+ER I K K + AD +R Q+ S G+++ED K+
Sbjct: 412 INTVLGVIPFSTSL--EIPSEVARLVEEREIARKEKNWKQADVLRNQIASFGYVVEDTKS 469
Query: 448 PDNGQR 453
++
Sbjct: 470 GPKVKK 475
>gi|152992414|ref|YP_001358135.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
gi|166225309|sp|A6Q8G9|SYC_SULNB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151424275|dbj|BAF71778.1| cysteinyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
Length = 465
Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats.
Identities = 155/481 (32%), Positives = 235/481 (48%), Gaps = 49/481 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++++++ F+ I +YVCGPTVYD AH+G+AR + FD+L R L+
Sbjct: 1 MQIFDSVQKTKVTFEPIREGEASIYVCGPTVYDDAHLGHARSSLAFDLLSRTLKALGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +N TDIDDKII++ + S + ITS Q+++ + +L +P+
Sbjct: 59 KVIMAKNFTDIDDKIIKKVEETGKS------MQEITSYYIQRYLDEMEQLGVQRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + + +IQ +I AY +N ++ FDTS +YG S K+ + +RV
Sbjct: 113 ATESLDAIEQMIQTLIDKDFAYVVSNGDVYFDTSKDSHYGDISH-KVSDDDTQSRVEHNS 171
Query: 184 HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGL 238
K+NP DF LWK E + +P+ GRPGWHIECSAM Y DIHGGG
Sbjct: 172 EKRNPRDFALWKACKGEEDICFGAPFSSGRPGWHIECSAMIEKYFKGNGQYSIDIHGGGA 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQS CA E A W+HNGF+ + G KMSKS GN + + LE
Sbjct: 232 DLLFPHHENEAAQSRCATGHE-LAKYWMHNGFVQINGEKMSKSLGNSFFLKDALEV---- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
+ V+R + HYR +F + L A+ L K + ST
Sbjct: 287 ---YGGEVLRYYLNSVHYRNDFNFNEEDLQTAKKRLDKLYRLKKRVLPGKASTVNKAFKQ 343
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
A+L+A+ +DLN A+ + ++ E+ + D + +LG +
Sbjct: 344 ALLNAMSDDLNISIALAVIDEMIAETNEKLDTDPKNKALKKETIANIEFIDTLLGFGGKE 403
Query: 399 EH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ + IE L+QER K K F+++D IR +L G + D +
Sbjct: 404 PFSYFQIGVDEALKEKIEILLQERTEAKKAKDFATSDAIRNELIDMGISIMDTAEGTVWE 463
Query: 453 R 453
+
Sbjct: 464 K 464
>gi|167750381|ref|ZP_02422508.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
gi|167656741|gb|EDS00871.1| hypothetical protein EUBSIR_01355 [Eubacterium siraeum DSM 15702]
Length = 472
Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats.
Identities = 156/486 (32%), Positives = 234/486 (48%), Gaps = 52/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L K EF + MY CGPTVY FAHIGN R I+ DVL + LRY +
Sbjct: 1 MQLYNSLSHKKEEFVPNVEGKVNMYTCGPTVYHFAHIGNLRSYIMEDVLEKYLRYVGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ DDK+++ A++EH ++ I T F D T+L
Sbjct: 60 -VKRVMNITDVGHLTSDGDTGDDKMLKGAKREHKTV------MEIAKYYTDAFFDDCTKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT+ I I +I ++I G+AYEA I FDTS + Y F+ K ++
Sbjct: 113 NIKRPDVVEPATHCIADFIKVISSLIKKGYAYEAGGNIYFDTSKLEKYYVFNDFKEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N ADF+LW + E W+SPWG G PGWHIECS +S +LG+
Sbjct: 173 VGVREGVEEDGNKRNKADFVLWFTKSKFDDQELKWDSPWGVGYPGWHIECSCISMKHLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D FPHH NEIAQS K N W H LN KMSKS G F+T++
Sbjct: 233 YLDIHCGGIDNAFPHHTNEIAQSEAYLG-HKWCNYWFHVHHLNTNSGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
L + + + R L++HYR+ + F+ + L A+ K
Sbjct: 292 LL------ESKGYDPVIYRFFCLLSHYRKSLVFSYENLDNAKGAYEKLVARIAQLLKAEQ 345
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
+ +A+ ND+NT AI AL+ + + T L + +L + +
Sbjct: 346 GEVDKAAYDKLREGFTAAMDNDINTSLAITALYDVLKADTTPATKLALIADFDKVLSLSL 405
Query: 397 CKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
++ + + I +L ++R K K F+ AD +R ++ + G+ +E+ +
Sbjct: 406 IEKAKAVNEKPTDTAEELPAEILELAEQRKQARKDKNFALADELRDKITAMGYTVEETRQ 465
Query: 448 PDNGQR 453
++
Sbjct: 466 GTVIKK 471
>gi|257438112|ref|ZP_05613867.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
gi|257199443|gb|EEU97727.1| cysteine--tRNA ligase [Faecalibacterium prausnitzii A2-165]
Length = 465
Score = 325 bits (834), Expect = 6e-87, Method: Composition-based stats.
Identities = 175/493 (35%), Positives = 251/493 (50%), Gaps = 73/493 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL R+ EF P R+YVCGPTVY++ HIGNARP+IVFD L R L Y
Sbjct: 1 MQIFNTLTRQKEEFVPQVPGEYRIYVCGPTVYNYIHIGNARPLIVFDTLRRYLEYRGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV NITDIDDK+I++ ++E S + + + +++KD L C PT QPR
Sbjct: 59 KVIYVSNITDIDDKLIKKGQEEGTS------MKEVAQRFEAEYLKDAAGLNCKKPTVQPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
AT HI Q++ +++++I GHAY N ++ F S P YG S K+D+ + G R
Sbjct: 113 ATEHIQQILDIVKDLIDSGHAYVAKNGDVYFRVKSDPEYGKLSHLKLDDLESGNRELRSQ 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E K++PADF +WK + P EP WESP+G GRPGWHIECSAMS +LGK D+H GG D
Sbjct: 173 MEDDLKEDPADFAVWKAAKPGEPAWESPYGMGRPGWHIECSAMSRTHLGKTIDLHCGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS CA+ E A+ W+HNGF+N++ +KMSKS NF T+ ++ +
Sbjct: 233 LIFPHHENEIAQSECANGCE-FAHYWMHNGFINVDNQKMSKSLHNFFTVRDVADL----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------- 343
+ IR ML YR P+++TV + + L + +
Sbjct: 287 --YGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRENLDFALSKTAFGTDETL 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHI 391
A+ +DLNT A+ A+ L +E F+ +
Sbjct: 345 TAKADEARAKFCKAMDDDLNTPDALAAVFDLVKEINTLSAASSKAALEAAAKAFDEITGV 404
Query: 392 LGIEVCKEHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGF 440
LG+ ++ + + +LV++R IR QL G+
Sbjct: 405 LGLMYNRKK--DEVPAEVTELVEKRAAAKKAKDWAAAD-----------AIRAQLTEMGW 451
Query: 441 ILEDYKNPDNGQR 453
++D +
Sbjct: 452 AVKDTAQGPQLSK 464
>gi|238618570|ref|YP_002913395.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|238379639|gb|ACR40727.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
Length = 470
Score = 325 bits (834), Expect = 7e-87, Method: Composition-based stats.
Identities = 170/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I+IYN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII+++R + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSRDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|262278507|ref|ZP_06056292.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262258858|gb|EEY77591.1| cysteinyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 473
Score = 325 bits (834), Expect = 7e-87, Method: Composition-based stats.
Identities = 177/499 (35%), Positives = 254/499 (50%), Gaps = 79/499 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+ +RK EF +I MYVCG TVYD+ HIG+AR M+ FD + R LR V
Sbjct: 6 LYNSEQRKKVEFVPRKEGHIDMYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--SV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y+RNITDIDDKII+RA + + I +T++ +D L C AP P+AT
Sbjct: 64 RYIRNITDIDDKIIKRANENG------ETIQQLTTRFIDAMNEDAANLGCAAPDEAPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVPEKY 183
+I QM +I N++ G AY +N ++ F+ + YG S RK+D+ + RV +
Sbjct: 118 EYIDQMQNMIGNLVNKGSAYPASNGDVYFEVTKFEKYGRLSGRKLDDMQAGASERVDVEV 177
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FP
Sbjct: 178 EKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFP 237
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + E+ N W+H GF+N++G KMSKS GNF TI +++E +
Sbjct: 238 HHENEIAQSEASTG-EQYVNYWMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFH 289
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
VIR ++ +HYR P++F+ L EA+ L+++ + + +D + +
Sbjct: 290 PEVIRYFIVSSHYRSPVNFSDVALKEAKTSLTRFYHSFKAYQQVYGQTTTETLDQSFIER 349
Query: 355 LYN----DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCK--- 398
N D NT A+ L +L +E + L +ILG+
Sbjct: 350 FNNAMCDDFNTAEAMAVLFELNKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHDVDA 409
Query: 399 -------EHLNKNISIAIEKLVQERLILLKMKKFSSADY-----------IRKQLESKGF 440
+ IE +Q+R+ IR+ L +G
Sbjct: 410 FLKSDIGQEALTLSDAEIEDFIQQRVD-----------AKKAKDFAKADGIRQSLLDQGV 458
Query: 441 ILEDYKNPDNGQRMTRWKQ 459
+LED + + T W++
Sbjct: 459 VLEDTR------QGTVWRR 471
>gi|189485695|ref|YP_001956636.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|226735068|sp|B1GYT2|SYC_UNCTG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|170287654|dbj|BAG14175.1| cysteinyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 465
Score = 325 bits (834), Expect = 8e-87, Method: Composition-based stats.
Identities = 165/478 (34%), Positives = 237/478 (49%), Gaps = 49/478 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKI+NTL K EF + + MYVCG T YD H+G+AR +VFD++ R L
Sbjct: 1 MTIKIHNTLSNKKEEFYPQRGNFVSMYVCGITPYDEVHLGHARVYVVFDIVKRHLLRRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +++N TD+DDKI++R++++ N S + + + RL L
Sbjct: 61 --IVKHIQNFTDVDDKIVKRSQEK------NMKPSELAQIYIEDYFVQAGRLNILKAEKY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P T IP+++ I+ ++ G AYE +I F +YG S+R + + + G RV
Sbjct: 113 PCVTQMIPEIVNFIKELVNKGLAYEIGGDIYFSVEKFKDYGKLSKRNLKDLRAGARVGVC 172
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K + DF LWK++ EP WESPWG+GRPGWHIECSAMSS LG DIHGGG D
Sbjct: 173 NGKNSAFDFALWKKTKENEPREVTWESPWGKGRPGWHIECSAMSSELLGDTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS +K WIHNGF+ + KMSKS NF T+ + E
Sbjct: 233 LIFPHHENEIAQSEAKTG-KKFVKYWIHNGFVTINKEKMSKSLNNFFTLKAIFE------ 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------TS 343
+ V+R +L HY P+DF+ + A L T
Sbjct: 286 -KYNPRVVRYYLLTQHYSSPLDFSDAGIESARNTLQGMDGTYLRLISSVKESDVEITDKD 344
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHI-LG 393
+ LSAL +D N+ A+ LH+L +K L +F A LG
Sbjct: 345 LSDLQGNFLSALDDDFNSEKALSYLHELKGLISKGLLTAGRERLSQLKKLFEDFAGTSLG 404
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDYKNPDN 450
I + +E N +++ L++ER K K ++ +D +RK + +G+ + D K+ +
Sbjct: 405 ILLPEEQ---NADESLQNLLKERNDARKNKNWAESDRVRKLIIDERGYKIFDNKDGSS 459
>gi|332796177|ref|YP_004457677.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
gi|332693912|gb|AEE93379.1| cysteinyl-tRNA synthetase [Acidianus hospitalis W1]
Length = 467
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 168/483 (34%), Positives = 249/483 (51%), Gaps = 54/483 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+++NTL RK +F ++ ++MYVCGPTVYD+ HIG+ R + +D + R LR
Sbjct: 1 MIRVFNTLGRKFEDFSTVENGIVKMYVCGPTVYDYVHIGHGRTFVAYDAIVRYLRLKGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++NITDIDDKII RA++ S I ++ ++++ + L P
Sbjct: 60 -NVIRIQNITDIDDKIINRAKETGKS------WEEIVDYYSKDYLENLSLLKVK-IDLHP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T HI ++I +Q +I GHAY + + FD + P+YG S K D+ G ++
Sbjct: 112 RVTQHIKEIINFVQGLIDKGHAYVAPSGSVYFDVDTYPHYGELSNTKKDQWNQGEEFVKE 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+DLIF
Sbjct: 172 --KRHPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGMDLIF 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQ+ + W+H FLN+ G KMSKS GN IT+ + L + +
Sbjct: 230 PHHENERAQTESLTG-KPWVRYWMHVAFLNIRGEKMSKSLGNIITLKDAL-------KKY 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
A V+R L +HYR PIDF+ + L ++++ L + I
Sbjct: 282 GADVLRYWYLSSHYRSPIDFSEENLEQSKVSLQRLKDALAVLKDILKEGPKSYSKDEDIK 341
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLAR----ESTKNHDLLPI------FNASA 389
A+ ND +T +A++ +H++A + D L F
Sbjct: 342 VQREIIQKIKEFDEAMSNDFDTATALKKIHEIANIVFSKLQNTRDFLAASIALDGFRIFN 401
Query: 390 HILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ G+ + L + I I+ +++ R +L + K + +D IR LES G + D K+
Sbjct: 402 EVFGVMDEEMGLAYERIYEVIDGIIEVRNLLRQKKMYDLSDQIRSILESHGIKVLDSKDK 461
Query: 449 DNG 451
Sbjct: 462 STW 464
>gi|86742926|ref|YP_483326.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
gi|109894901|sp|Q2J545|SYC_FRASC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|86569788|gb|ABD13597.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
Length = 524
Score = 325 bits (833), Expect = 8e-87, Method: Composition-based stats.
Identities = 153/538 (28%), Positives = 236/538 (43%), Gaps = 106/538 (19%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R++ F+ + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQAAPHVGHIRTALPFDLLRRWLVQSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V+N+TDIDDKII A ++ S+ + ++ T+ F L L PT Q
Sbjct: 60 -RSVTFVQNVTDIDDKIIINADRDGTSV------WELATRQTRAFDDAYRTLGILPPTIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI L+ ++ G+AY + + F + +YG+ S ++ D + V +
Sbjct: 113 PRATGHIPEMIALVSALVEGGYAYASGGSVWFRVGAFADYGALSHQRPDAMQ--PSVEAE 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCCADRIEK--------------------------TANIWIHNGFLNLEGR 276
PHHENE AQ+ CA A W+H G L G
Sbjct: 231 PHHENERAQTVCAATARPASNAASADSPGPGGGEPGGGEPSSGEMARYWMHVGLLTTGGT 290
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS GN + + + L+ + V+R +L HYR ++++ + L E+ +
Sbjct: 291 KMSKSLGNSVLVADALDAVR-------PQVLRYHLLSAHYRSTLEYSAEALAESTAAHDR 343
Query: 337 WPQTSTSKGII------------------------------------------------D 348
+ I
Sbjct: 344 VETFVRNALDILGGPGEAAALAADEVVSSVAGAQPTVAGARPVPVPGPGGESRLTPRRAW 403
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE 399
A+ +DL A+ AL + + + +I G++ ++
Sbjct: 404 SDFTIAMDDDLAVGRALAALFGAVSQGNQVLSKAHSRELAGWVDVTRRMLNIFGLDPHEQ 463
Query: 400 ------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ A++ ++ R + ++ AD IR +L + G I+ED
Sbjct: 464 WPTAGAEFRPALDGAMQVVLDLRSAARARRDYAEADAIRSRLAAAGLIVEDTPEGQRW 521
>gi|78777410|ref|YP_393725.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
gi|109894960|sp|Q30R91|SYC_SULDN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78497950|gb|ABB44490.1| cysteinyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
Length = 466
Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats.
Identities = 164/481 (34%), Positives = 245/481 (50%), Gaps = 48/481 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ I+++ ++ EF + + +YVCGPTVYD AH+G+A+ +VFD+L R+L E
Sbjct: 1 MFIFDSAKKIKREFIPQEQGKVSLYVCGPTVYDDAHLGHAKSALVFDLLCRVLNANGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITDIDDKII RA+++ N I +T T + K+ L P +P+
Sbjct: 60 -VTYARNITDIDDKIINRAQEQ------NKTIKEVTDFYTDAYHKEMALLGISRPDIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + M L+Q ++ + HAY + ++ FDTSS Y + S R DE + RV
Sbjct: 113 ATESLDAMYALVQKLLDNKHAYTTDDGDVYFDTSSDSKYLTLSNRVQDESEKLQRVQSSS 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF-----DIHGGGL 238
K+NPADF LWK + SP+G+GRPGWH+ECSAM +L K DIHGGG
Sbjct: 173 QKRNPADFALWKSIHDESVTFGSPFGKGRPGWHLECSAMIEKHLSKPNAKFAVDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ+ CA A W+HNGF+N++G KMSKS GN + + L
Sbjct: 233 DLLFPHHENEAAQTRCATD-HALAAYWMHNGFVNIDGEKMSKSLGNSFFLKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDP 349
+ + V+R +L THYR +F + L A+ L K + K
Sbjct: 286 -KIYDGEVLRFYLLSTHYRSNFNFNEEDLATAKKRLDKIYRLKKRLFGVTYEDEKTDFKK 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L L +DLN +++ + ++ + + D L + ILG
Sbjct: 345 ELLETLSDDLNISASLALIEEMITRANETLDTAGKHKELKREALSNLSFIEKILGFGIKN 404
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + +N+ I KL+++R K K F+++D +R ++ + G L D +
Sbjct: 405 PYEYFQFGVNEETKTEIAKLIEKRAEAKKSKDFAASDMLRDKILAYGVNLMDTPQGSFWE 464
Query: 453 R 453
+
Sbjct: 465 K 465
>gi|328949107|ref|YP_004366444.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
gi|328449431|gb|AEB15147.1| cysteinyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
Length = 510
Score = 325 bits (833), Expect = 9e-87, Method: Composition-based stats.
Identities = 167/524 (31%), Positives = 243/524 (46%), Gaps = 88/524 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNT+ RKI EF I + Y CGPTVY++AHIGN R + D L R L +
Sbjct: 1 MALRLYNTMGRKIEEFVPIHEGFVGFYGCGPTVYNYAHIGNLRAYVFLDTLDRTLTFLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+K +V NITDI +DK+++ A++ H S+ + T F D
Sbjct: 61 DK--KHVMNITDIGHLTGDADEGEDKMLKTAQERHQSVL------EVAKFYTDAFFNDID 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL + P +AT H+ MI LI+ I +GH Y + + +D ++ P+YG + +D+
Sbjct: 113 RLNIIRPDVVCKATEHVQDMIELIKRIEANGHTYMSGGNLYYDVTTYPDYGKLANLNLDD 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGK 229
K G R+ +K+NP DF+LW + E W+SPWGRG PGWHIECSAMS YLG+
Sbjct: 173 LKAGARIEVDQNKRNPYDFVLWFTKSKFENQALTWDSPWGRGYPGWHIECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL----------EGRKMS 279
FDIH GG+D I HH NEIAQS A K N W+HN FL + + KMS
Sbjct: 233 HFDIHTGGIDHIPIHHTNEIAQSEGATG-HKWVNYWLHNEFLVIAKDKKAAESGQAEKMS 291
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----- 334
KS+GNF+T+ L++ + + R +L HYR+ I F+ + A+
Sbjct: 292 KSHGNFLTLQSLID------KGYNPLDYRFFLLGGHYRKQIYFSWDAMDSAKNSRTALVQ 345
Query: 335 --------------------------SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
K S +AL NDL+T A+ +
Sbjct: 346 RVARLAQNAGGADSLNYSKIYSKGEACKTENLSEKAKEYIEKFQAALENDLSTPVALSCI 405
Query: 369 HKLAREST-KNHDLLPIFNASAHILGIEVCKEHLNKNISIA------------------I 409
K ++ + K + L + ++G+ + K + I
Sbjct: 406 QKAVKDGSLKPEESLELVRRMDSVIGLNLVKSAADFLAEQEKEKKASVPDHSGDPEAQEI 465
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ LV ER+ K K F+ AD IR L S+G I+ D N +R
Sbjct: 466 DALVAERVEAKKAKNFARADEIRNMLSSRGIIITDTPNGAVWKR 509
>gi|283781355|ref|YP_003372110.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
gi|283439808|gb|ADB18250.1| cysteinyl-tRNA synthetase [Pirellula staleyi DSM 6068]
Length = 515
Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats.
Identities = 149/522 (28%), Positives = 224/522 (42%), Gaps = 80/522 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL + F + + +Y+CGPTVY +HIG+ ++FD + R L Y
Sbjct: 1 MSIRVYNTLSKTKEPFVPVVAGKVGIYLCGPTVYKESHIGHMVGPVIFDTIKRYLTYCGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V NITD+DDK+I + R+ N +S I ++ ++ + L
Sbjct: 61 Q--VTWVVNITDVDDKLIGQMRER------NLPMSEIAAEMVVDYLNNLKALGVDQIDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT ++ +I I+++I AY A ++ FD YG S R + + G
Sbjct: 113 PKATEYMDDIIRFIEDLIKKDFAYAAGGDVFFDVGRDAQYGKLSNRS-ADSQQGEGGEAA 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P+DF LWK + P EP W+SPWG+GRPGWHIECSAMS LG+ FDIHGGGLDL+F
Sbjct: 172 SRKRSPSDFALWKSAKPGEPAWDSPWGQGRPGWHIECSAMSRAILGETFDIHGGGLDLVF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLN------------LEGRKMSKSNGNFITINE 290
PHHENE+AQS C + N W+HNG L + ++ +
Sbjct: 232 PHHENELAQSECCSG-KPMVNFWMHNGLLRASSAAGKVGGKGDREEAAAPQPAGKMSRSG 290
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--------- 341
IR +L THYR + + + L E+ L + +
Sbjct: 291 GAGGLADVIAEQGGERIRFFLLKTHYRSTVVYGPEGLEESSTALESFYRFFERFQRITKQ 350
Query: 342 ----------TSKGIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTK 377
G DP L + +D NT A+ L ++ RE K
Sbjct: 351 RFFNLPPTLKREDGEFDPAGDPLLTLVHGFRQGFLEKMDDDFNTGGAMSDLFEMVREMNK 410
Query: 378 NHD--------------------LLPIFNASAHILGIEVCKEHL-----NKNISIAIEKL 412
D ILG+ + + + + ++ +
Sbjct: 411 FADQNKLDEVTQLPHPQVAILVKAAKTLRELTSILGLFLSQPAKRGGGGDAVLPKVMQLM 470
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
++ R K F++AD IR L G LED K +
Sbjct: 471 MELRTEARNRKDFATADRIRLGLAEMGIALEDRKGTTEWRIG 512
>gi|311112938|ref|YP_003984160.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
gi|310944432|gb|ADP40726.1| cysteine--tRNA ligase [Rothia dentocariosa ATCC 17931]
Length = 474
Score = 325 bits (833), Expect = 1e-86, Method: Composition-based stats.
Identities = 158/482 (32%), Positives = 240/482 (49%), Gaps = 47/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ Y++ I +F+ + P R+Y CG TV H+G+ R +VFD L R +RY
Sbjct: 1 MRFYDSATSSIRDFEPVVPGEARIYYCGATVQGEPHVGHIRSALVFDQLARWMRYRGF-- 58
Query: 65 CVTYVRNITDIDDKIIERARQ----EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VT VRN+TDIDDKI+ ++ + + N+ + + + F + L PT
Sbjct: 59 KVTTVRNVTDIDDKILAKSVESAQPTYTGEHPNEQWWALAYRYEKVFARAYATLGIDPPT 118
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
++PRAT HIP+M LIQ +I GHAY + ++ FD S YG+ +R+ +D+ +
Sbjct: 119 YEPRATGHIPEMFELIQRLIDRGHAYPALDDSGDVYFDVRSWEQYGALTRQSVDDMQDSA 178
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
+ K++P DF LWK EP W+SPWGRGRPGWH+ECSAM+ YLGK FDIH
Sbjct: 179 DADPR-GKRDPRDFALWKGYKEGEPLTAAWDSPWGRGRPGWHLECSAMAGKYLGKRFDIH 237
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGGLDL FPHHENE+AQS A + AN W+HNG + EG KMSKS GN I+ ++L+
Sbjct: 238 GGGLDLRFPHHENELAQSTAAG--DDFANFWMHNGMVTYEGEKMSKSIGNTISPVQMLQQ 295
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSK 344
+ V+R + HYR +D+ L EA + + + +
Sbjct: 296 AR-------PLVVRYYLGSAHYRSVLDYRPTSLEEARVAIERVEAFLAATSELMAPDPQE 348
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAR-------ESTKNHDLLPIFNASAHILGI--- 394
+ AL +D+N A+ LH+ R + A A++LG+
Sbjct: 349 RRVPQDFADALDDDMNIPRALAVLHEQTRAGNAALAAGADASEFANAVWAMANVLGLTSL 408
Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
++ + I ++++R K +++AD +R L + G ++D
Sbjct: 409 MNLDGSGASGAEHQALDALIHTILEQRASARAEKDWATADRMRDVLAAAGITVKDGAQGS 468
Query: 450 NG 451
Sbjct: 469 TW 470
>gi|297380086|gb|ADI34973.1| cysteinyl-tRNA synthetase [Helicobacter pylori v225d]
Length = 465
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|317177679|dbj|BAJ55468.1| cysteinyl-tRNA synthetase [Helicobacter pylori F16]
Length = 465
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 231/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++ + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER K K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKKQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|23464902|ref|NP_695505.1| cysteinyl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|61216350|sp|Q8G7G5|SYC_BIFLO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|23325493|gb|AAN24141.1| cysteinyl-tRNA synthetase 1 [Bifidobacterium longum NCC2705]
Length = 546
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 153/539 (28%), Positives = 225/539 (41%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+ +A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILVKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 202
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+C A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTAIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGGAADGTAESPE 493
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + I + + R K K F+ AD IR L G +ED G + + W K
Sbjct: 494 HAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWSLK 546
>gi|229577911|ref|YP_002836309.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284996496|ref|YP_003418263.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|228008625|gb|ACP44387.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284444391|gb|ADB85893.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 470
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 169/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I+IYN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++++ + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|227826502|ref|YP_002828281.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|229583664|ref|YP_002842165.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|227458297|gb|ACP36983.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|228018713|gb|ACP54120.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
Length = 470
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 169/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I+IYN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++++ + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKAYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|315635665|ref|ZP_07890928.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
gi|315479962|gb|EFU70632.1| cysteine--tRNA ligase [Arcobacter butzleri JV22]
Length = 467
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 159/483 (32%), Positives = 249/483 (51%), Gaps = 48/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I+++++++ EF+ I +++YVCGPTVYD +H+G+AR I FD+L+R+L+
Sbjct: 1 MNTLYIFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKAND 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT +N TDIDDKII++ + N + IT++ + D L L T
Sbjct: 61 YE--VTMTKNFTDIDDKIIKKMYE------TNKRLEDITNQYINAYKADMKALNILDNTI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+P+AT ++ M +I N+I AY+ ++ + FDTS YG+ S + +++ RV E
Sbjct: 113 EPKATENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKS-NDENSQARVEE 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGG 236
K+N ADF LWK + +++P+G+GRPGWHIECSAM +L DIH G
Sbjct: 172 NQEKRNSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENE AQ+ C+ + A W+HNGF+N+ G KMSKS GN + ++L
Sbjct: 232 GADLLFPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGII 347
+S+ VIR ++ THYR + F + L ++ L K +
Sbjct: 287 ---KSYSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGVEDSSVNKKF 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE- 395
+L+AL +D+NT A+ + ++ + D L+ N +LGI
Sbjct: 344 KEDILNALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFVEKVLGIGG 403
Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ +N++ IE L+ +R K K F +AD IR +L S L D N
Sbjct: 404 NDAYAYFQFGINESTKEKIEDLILKRNEAKKAKDFQTADEIRDELSSMDISLMDTVNGTV 463
Query: 451 GQR 453
++
Sbjct: 464 WEK 466
>gi|318042057|ref|ZP_07974013.1| cysteinyl-tRNA synthetase [Synechococcus sp. CB0101]
Length = 489
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 170/520 (32%), Positives = 236/520 (45%), Gaps = 99/520 (19%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+ NTL R++ EF+ I+P + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MTLKLTNTLTRRVEEFRPIEPGKVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLIWSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TDIDDKI+ RA +E S + ++ +N + FV D RL L
Sbjct: 61 --AVTFVQNYTDIDDKILNRAAEEGSS------MEAVSERNIEAFVADMARLNILPADRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
PRAT + + LI + G AY A+ ++ F YG S R +++QK
Sbjct: 113 PRATRSLDAIRALISELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLEQQKDNAAGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 SEEEARKQHPFDFALWKGTKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A E A+ W+HNG +N+ G+KMSKS GNF TI LL++
Sbjct: 233 DLVFPHHENEIAQSEAATGKE-LAHYWLHNGMVNVGGQKMSKSLGNFTTIRALLDS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
+RL L HYR+P+DFT + L A G I
Sbjct: 288 --GVSPMTLRLFTLQAHYRKPLDFTAEALDAAATGWKGLNAALGLAGEIGAASNRATELP 345
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL------------------- 382
+A+ +DLNT +A+ L +LA+ + L
Sbjct: 346 SALAAARERFAAAMNDDLNTSAALAVLFELAKPLRSLANRLERGDASARSEASTPELAAQ 405
Query: 383 -PIFNASAHILGIEVCKEHLNK----------NISIAIEKLVQERLILLKMKKFSSADY- 430
+ A +LG+ + IE ++
Sbjct: 406 AALLQELAGVLGLRHEAPDAAQPSGANAAATGLSDADIESQIEA--------------RK 451
Query: 431 -------------IRKQLESKGFILEDYKNPDNGQRMTRW 457
IR+ L+++G L D +T W
Sbjct: 452 AAKAARDFAAADSIREALKAQGIELIDKPGG-----VTEW 486
>gi|332097289|gb|EGJ02270.1| cysteinyl-tRNA synthetase [Shigella dysenteriae 155-74]
Length = 435
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 163/467 (34%), Positives = 234/467 (50%), Gaps = 70/467 (14%)
Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
CG TVYD HIG+ R + FDV+ R LR+ + YVRNITDIDDKII+RA +
Sbjct: 2 CGITVYDLCHIGHGRTFVAFDVVARYLRFLGY--KLKYVRNITDIDDKIIKRANENG--- 56
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-AN 149
++ + + + KD L L P +PRAT+HI ++I L + +I GHAY N
Sbjct: 57 ---ESFVALVDRMIAEMHKDFDALNILRPDMEPRATHHITEIIELTEQLIAKGHAYVADN 113
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+++FD + P YG SR+ +D+ + G RV K+NP DF+LWK S EP W SPWG
Sbjct: 114 GDVMFDVPTDPTYGVLSRQDLDQLQAGARVDVVDDKRNPMDFVLWKMSKEGEPSWPSPWG 173
Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
GRPGWHIECSAM+ LG FDIHGGG DL+FPHHENEIAQS CA + N W+H+G
Sbjct: 174 AGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPHHENEIAQSTCAHDGQ-YVNYWMHSG 232
Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
+ ++ KMSKS GNF T+ ++L + + A +R ++ HYR ++++ + L +
Sbjct: 233 MVMVDREKMSKSLGNFFTVRDVL-------KYYDAETVRYFLMSGHYRSQLNYSEENLKQ 285
Query: 330 AEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLAREST--KN 378
A L + + + A+ +D NT A L +ARE K
Sbjct: 286 ARAALERLYTALRGTDKTVAPAGGEAFEARFIEAMDDDFNTPEAYSVLFDMAREVNRLKA 345
Query: 379 HDLLPI------FNASAHILGIEVCKEH--------LNKNISIAIEKLVQERLILL---- 420
D+ + +LG+ + + + IE L+Q+RL
Sbjct: 346 EDMAAANAMASHLRKLSAVLGLLEQEPEAFLQSGAQADDSEVAEIEALIQQRLDARKAKD 405
Query: 421 -------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ +L G +LED G + T W++K
Sbjct: 406 WAAADAARD-----------RLNEMGIVLED------GPQGTTWRRK 435
>gi|291297887|ref|YP_003509165.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290567107|gb|ADD40072.1| cysteinyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 480
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 158/481 (32%), Positives = 242/481 (50%), Gaps = 49/481 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T RK+ +F P + +Y+CG T+ HIG+ R + +D++ ++
Sbjct: 1 MSLRLYDTGTRKVRDFVPRVPGKVSIYLCGLTLQGPPHIGHLRNGVNYDIMCSWFQHRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYVRN+TDI+DK++ ++R++ + I+ +N ++ D L PT++
Sbjct: 61 D--VTYVRNVTDIEDKVLAKSREQ------DRPWWAISFENERRLAADYEALGVRPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P+M+ LI +I GHAY N ++ F S P YG+ S RK E + +
Sbjct: 113 PRATGHVPEMMDLIAELINKGHAYAPGNGDVYFSVESYPEYGALSHRK-PEDMLCPDDGD 171
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++P DF LWK + P EP W +P+GRGRPGWH+ECSAMS YLG FDIHGGG
Sbjct: 172 ESVKRDPRDFALWKAAKPGEPADSSWNTPYGRGRPGWHLECSAMSRRYLGDAFDIHGGGT 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE+AQS A N W+HN +NL G KMSKS GN +L + G
Sbjct: 232 DLMFPHHENELAQSRAAG--LDFTNFWVHNNMVNLSGTKMSKSLGN------VLSVEALG 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------GII 347
R + IR + HYR ID++ LTE+ + + G +
Sbjct: 284 ERGFRPVEIRYYLAAPHYRSVIDYSDAILTESATSYRRLENFVSRAAERFGHDATEGGAL 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCK 398
+AL +D T +A A+H++ RE D A +L ++
Sbjct: 344 CADFTAALDDDFGTPAAFAAIHEVTREGNAALDSSDDAAARGAAASVRAMLGVLNLDPLS 403
Query: 399 EHLNK--------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ + + ++++R K K +++AD IR QL G ++ED
Sbjct: 404 RQWTETGGDDLTPVVDSLVNLVLEQRQQARKNKDYATADAIRDQLSRAGLVIEDGPQGSR 463
Query: 451 G 451
Sbjct: 464 W 464
>gi|296106895|ref|YP_003618595.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
gi|295648796|gb|ADG24643.1| cysteinyl-tRNA synthetase [Legionella pneumophila 2300/99 Alcoy]
Length = 413
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 173/432 (40%), Positives = 232/432 (53%), Gaps = 41/432 (9%)
Query: 47 MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
M+ FDV+ R LR + VTYVRNITDIDDKII RA + S I +T++
Sbjct: 1 MVAFDVMVRYLRSQGFD--VTYVRNITDIDDKIIARASERDVS------IDELTAQYIDA 52
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSF 165
DT L L P H+PRAT HI +I LIQ ++ G AY N ++ ++ + P YG
Sbjct: 53 MNNDTHALNILPPDHEPRATGHIETIIRLIQRLLEKGSAYVSENGDVCYEVDTFPEYGKL 112
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
S + I+ G+RV K++P DF+LWK++ P EP W SPWG GRPGWHIECSAM+ H
Sbjct: 113 SHKDIEGLVSGSRVEIVKEKRSPLDFVLWKKAKPGEPSWPSPWGEGRPGWHIECSAMAMH 172
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
LG+ FDIHGGGLDL FPHHENEIAQS A + AN W+H G L + G KM+KS GNF
Sbjct: 173 ELGEQFDIHGGGLDLQFPHHENEIAQSEAATG-KPFANYWLHVGMLQVNGEKMAKSIGNF 231
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----- 340
TI ++L + VIR +L +HYR P++++ + L A+ L + Q
Sbjct: 232 YTIADVL-------KEHHPEVIRYFLLSSHYRSPLNYSEENLLNAKKALIRLYQAVKDVP 284
Query: 341 -STSKGIIDPAVLSA----LYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAHILG 393
T+ +D + +D NT A+ L +LA E K++ L A ILG
Sbjct: 285 PQTADSKLDEYWQEQFNQAMNDDFNTPVALSVLFQLAHEVNKSNSPALAHTLKNLAGILG 344
Query: 394 IEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
L + + IE+L+ ERL + ++ AD IR L SKG LED
Sbjct: 345 FLQKDPESFLQSGLAEEEKLVIEQLIAERLQARAERNWAKADQIRTDLLSKGIELED--- 401
Query: 448 PDNGQRMTRWKQ 459
G T W++
Sbjct: 402 ---GATGTTWRR 410
>gi|32473247|ref|NP_866241.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
gi|32397926|emb|CAD73927.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica SH 1]
Length = 628
Score = 325 bits (832), Expect = 1e-86, Method: Composition-based stats.
Identities = 159/536 (29%), Positives = 235/536 (43%), Gaps = 93/536 (17%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I++YNTL + F + + MY+CGPTVY +HIG+ ++FD + R L Y
Sbjct: 108 QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 167
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT+V NITD+DDK+I ++++ +S I + T ++ + L H
Sbjct: 168 YE--VTWVVNITDVDDKLIGKSKERGI------PMSQIAVEMTADYLANLRELGVNQIDH 219
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+H+PQ+I I ++ G AY + ++ FD + P YG S R +++ + G
Sbjct: 220 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVED-QQGEGGGA 278
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGGLDL+
Sbjct: 279 AAKKRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 338
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLN--LEGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQS C W+HNG + +G+ KS+ ++ G
Sbjct: 339 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 397
Query: 300 R---------------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+ S IR +L T YR I + + L EA L + +
Sbjct: 398 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 457
Query: 345 GIID---------------------------------PAVLSALYNDLNTVSAIQALHKL 371
I L+A+ +D NT +AI L
Sbjct: 458 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 517
Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
R ++ D + + +LG+ E +
Sbjct: 518 LRTLNRHIDANQLAAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 577
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + L+ R + K +++ D IR +L G L D K T W++K
Sbjct: 578 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 627
>gi|126735695|ref|ZP_01751440.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
gi|126714882|gb|EBA11748.1| cysteinyl-tRNA synthetase [Roseobacter sp. CCS2]
Length = 477
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 203/495 (41%), Positives = 252/495 (50%), Gaps = 77/495 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++ NT RK +F IDP N+R+Y+CGPTVYD AHIGN RP +VFDVL+RLL+ YG
Sbjct: 4 IRLNNTKTRKREDFIPIDPKNVRLYLCGPTVYDRAHIGNLRPSLVFDVLFRLLKEVYGPD 63
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN TD+DDKI RA + AI IT++ Q + D + PTH+PR
Sbjct: 64 HVTYVRNFTDVDDKINARAAETG------RAIGDITAETIQWYHDDLDAVGLQRPTHEPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT+HI QMI +I+ +I GHAY A ++F S YG+ S R ID+ G RV +
Sbjct: 118 ATDHIAQMIAMIEVLIEKGHAYAAEGHVLFAVESYDAYGALSGRSIDDMIAGARVEVAPY 177
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK S PGW SPWG GRPGWHIECSAMS LG+ FDIHGGG DL FPH
Sbjct: 178 KRNPMDFVLWKPSGDGVPGWNSPWGYGRPGWHIECSAMSLELLGESFDIHGGGNDLQFPH 237
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA + A W+HN L +EG+KMSKS GNF TI +LL+ + P
Sbjct: 238 HENEIAQSACAHPTGEFARYWVHNEMLQVEGKKMSKSLGNFFTIRDLLD------QGVPG 291
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
VIRL ML THY + +D+T R EAE L KW G D
Sbjct: 292 EVIRLVMLGTHYGKTMDWTETRRAEAEGTLRKWYGILQGHGFGPELIAALEAEGKWQPDA 351
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI--------EVCKEHL 401
+ L NDLNT A+ LH LA+ K L F +LG+ +
Sbjct: 352 EFIGVLANDLNTSGALARLHVLAKG--KTPVALAGFAYGMQMLGLVNDWSAIPQFDGGEA 409
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSA----------------------DYIRKQLESKG 439
++ AI A D +R L + G
Sbjct: 410 GSGVAPAI------------------ATRVDALLADRAAARAAKDWARADEVRDILNAAG 451
Query: 440 FILEDYKNPDNGQRM 454
+ D
Sbjct: 452 VQVTDVGGQATWAPG 466
>gi|34556870|ref|NP_906685.1| cysteinyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
gi|61216261|sp|Q7MA68|SYC_WOLSU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|34482585|emb|CAE09585.1| CYSTEINYL-TRNA SYNTHETASE (FRAGMENT) [Wolinella succinogenes]
Length = 467
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 161/483 (33%), Positives = 247/483 (51%), Gaps = 49/483 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
IKI+++++R+ EF + + +YVCGPTVYD +H+G+AR I FD+L RL+ +
Sbjct: 1 MMIKIFDSVKREKVEFIPLKKGEVSLYVCGPTVYDDSHLGHARSAIAFDLLRRLMEFEGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+N TDIDDKII+++ + + I IT + +++D +L P +
Sbjct: 61 --RVRFVKNFTDIDDKIIKKSLESG------EEIGAITERYITSYLEDMQKLGIKRPDIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT + M +IQ+++ G AY+ +I D P+YG S R ++ + +R+
Sbjct: 113 PRATESLDLMWEMIQSLLQKGIAYQTPRGDIYLDVKQDPSYGKLSGRG-EDLEQVSRIES 171
Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGG 236
K++P DF LWK + G+ESP+GRGRPGWHIECSAM +L K DIH G
Sbjct: 172 SEEKRDPRDFALWKSYKGQSDVGYESPFGRGRPGWHIECSAMIEKHLAKEGDYAIDIHAG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENE Q+ CA E A W+HNGF+ + G KMSKS GN + + L
Sbjct: 232 GSDLLFPHHENEACQTRCATGRE-LAKYWMHNGFVTINGEKMSKSLGNSFFVKDAL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------- 348
R + V+R +L THYR ++F+ + L ++ L + + G +
Sbjct: 287 ---RVYDGEVLRFYLLSTHYRMGLNFSEEDLLASKKRLDRLYRLKKRVGEGEVGAPSEKF 343
Query: 349 -PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILG--- 393
+L L +D+N A+ A+ ++ S + D + +LG
Sbjct: 344 LERLLEGLRDDMNISRALSAMDEMLTLSNEELDSSPKERALQATIRGNLEVLERLLGIGA 403
Query: 394 ---IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
I + ++ IE+L++ER K K F+ AD IRK L +G L D +
Sbjct: 404 KSPILYFQMGVSPEEKEKIEELIKERAEAKKAKDFARADEIRKSLSDQGIALLDTPSGTL 463
Query: 451 GQR 453
+R
Sbjct: 464 WER 466
>gi|308184667|ref|YP_003928800.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
gi|308060587|gb|ADO02483.1| cysteinyl-tRNA synthetase [Helicobacter pylori SJM180]
Length = 465
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 234/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLVKNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+++I+ ++ AY +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|315586833|gb|ADU41214.1| cysteine--tRNA ligase [Helicobacter pylori 35A]
Length = 465
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 153/487 (31%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ MI +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMIGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IEK ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIEKKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|217034711|ref|ZP_03440113.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
gi|216942824|gb|EEC22321.1| hypothetical protein HP9810_896g8 [Helicobacter pylori 98-10]
Length = 465
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++ + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S +R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNSKNKALKGEILANLKFVEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|229580812|ref|YP_002839211.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228011528|gb|ACP47289.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 470
Score = 324 bits (831), Expect = 2e-86, Method: Composition-based stats.
Identities = 168/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I++YN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRVYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++++ + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|225351179|ref|ZP_03742202.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225158635|gb|EEG71877.1| hypothetical protein BIFPSEUDO_02769 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 557
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 153/534 (28%), Positives = 222/534 (41%), Gaps = 103/534 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + MYVCG TV HIG+ R + FDV+ R
Sbjct: 39 LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGY-- 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L PT++PR
Sbjct: 97 KVTFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYNTLGVEPPTYEPR 150
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ---- 173
AT H+ MI LI+ II +GH Y + FD +S P+YG + +K
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210
Query: 174 -------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 211 SEVADAMGPSVDNTGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAWV 328
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS GN +++ +L A V+R A+ YR ++++ Q LTEA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLTEAQ 381
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPSREEIVSVSADELPADFVAAMNDDINVSGASAAIFTAIR 441
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHLNKN------------ 404
L A LG++ E
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGTAGAGAD 501
Query: 405 ------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + ++ER K K F+ AD IR L + G +ED
Sbjct: 502 SAEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGIAIEDTPQGPTWT 555
>gi|289178054|gb|ADC85300.1| Cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
BB-12]
Length = 559
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 156/529 (29%), Positives = 231/529 (43%), Gaps = 97/529 (18%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+Y+T ++ F+ I P + MYVCG TV HIG+ R + FD++ R
Sbjct: 43 DLKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERLGY- 101
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT++RN+TDIDDKI+++A + ++F L LAPT++P
Sbjct: 102 -KVTFIRNVTDIDDKILDKAAAAG------EDWWARAYHYEREFTHAYNELGVLAPTYEP 154
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M++LI+ II +GHAY ++ FD +S P+YG + +K +
Sbjct: 155 RATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDE 214
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
+K++P DF LWKR +P W++P+G
Sbjct: 215 AAAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGT 274
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A TAN W+H+ +
Sbjct: 275 GRPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGYR--TANRWMHSAW 332
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 333 VTAKGEKMSKSLGNGLSVPVVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEA 385
Query: 331 EILLSKWPQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLA 372
E + + ++A+ +D+N A A+
Sbjct: 386 EAAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQI 445
Query: 373 RESTKNHDLLP----------------IFNASAHILGIEVC-------------KEHLNK 403
RE L A LG++ K
Sbjct: 446 REGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALK 505
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ + R K K F+ AD IR L + G +ED
Sbjct: 506 TLGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIEDGPTGSTWT 554
>gi|212716741|ref|ZP_03324869.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
16992]
gi|212660445|gb|EEB21020.1| hypothetical protein BIFCAT_01678 [Bifidobacterium catenulatum DSM
16992]
Length = 556
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 152/533 (28%), Positives = 221/533 (41%), Gaps = 102/533 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + MYVCG TV HIG+ R + FDV+ R
Sbjct: 39 LKLYDTASHAVSNFTPIKPGQVGMYVCGATVQSSPHIGHIRAAVTFDVVRRWFERLGY-- 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L PT++PR
Sbjct: 97 KVTFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYNTLGVEPPTYEPR 150
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ---- 173
AT H+ MI LI+ II +GH Y + FD +S P+YG + +K
Sbjct: 151 ATGHMIDMIDLIKQIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVADAA 210
Query: 174 -------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 211 SEVADAMGPSVDNAGNDKYNPVDPADMSEDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAWV 328
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLPEAQ 381
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 382 SAYDRVSNFIERAGAAVGGQPPREEIVSISADALPADFVAAMNDDINVSGASAAIFTAIR 441
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHLNKN------------ 404
L A LG++ E
Sbjct: 442 SGNTLLSKLADRVDSDVAKDEVRAVLVNVRAMLDTLGLDPLAEPWVSEGAAGGAGSGADS 501
Query: 405 -----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ + + ++ER K K F+ AD IR L + G +ED
Sbjct: 502 AEHTALDRLVSEQLEERAEARKAKDFARADAIRDALGAAGITIEDTPQGPTWT 554
>gi|332298095|ref|YP_004440017.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
gi|332181198|gb|AEE16886.1| cysteinyl-tRNA synthetase [Treponema brennaborense DSM 12168]
Length = 497
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 169/517 (32%), Positives = 243/517 (47%), Gaps = 81/517 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL R++ +F I Y CGPTVY+FAHIGN R + D+L R L Y
Sbjct: 1 MALRLYNTLGRQLQDFIPIHAGKAGFYGCGPTVYNFAHIGNLRAYVFLDILDRTLTYLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ +T+V NITDI +DK+++ A+ S+ I T F D
Sbjct: 61 D--ITHVMNITDIGHLSGDADEGEDKMVKTAKDRGQSVL------EIAQFYTDAFFGDID 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL P +AT H+P MI LI+ I +GH Y A + FD S+ P+YG + +D+
Sbjct: 113 RLNIRRPDVVCKATEHVPDMIELIKRIEANGHTYTAGGNLYFDVSTFPSYGDLAGLNLDD 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
K G R+ +K+NP DF+LW + E W+SPWGRG PGWHIECSAMS YLG+
Sbjct: 173 LKAGARIDIDRNKRNPFDFVLWFTKSKFENQALVWDSPWGRGYPGWHIECSAMSMKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK---------MSK 280
FDIH GG+D I HH NEIAQS A +K N W+HN FL + K MSK
Sbjct: 233 QFDIHTGGIDHIPIHHTNEIAQSEGATG-KKWVNYWLHNEFLVIAKDKESADGGAGKMSK 291
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--- 337
S+GNF+T+ L++ + + A R +L HYR + F+ + A+
Sbjct: 292 SSGNFLTLQSLVD------KGYDALDYRFFLLGAHYRSQVAFSWAAMDGAKNARKALVQR 345
Query: 338 --------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
+ S +AL NDL T A+ AL +++
Sbjct: 346 VAKVLARSAERVQTGAGLPTKKPSARAHAYLDKFTAALENDLATPQALSALQTAVKDAEL 405
Query: 378 N-HDLLPIFNASAHILGIEVCKEHLNKNISI--------------AIEKLVQERLILLKM 422
+++ + +L +++ K I+ L++ER K
Sbjct: 406 APEEVVSLVQRMDSVLALDLLKNARQLLADETAAAVTDGSDPEAKEIQALIEERTAAKKA 465
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K ++ AD IR +L +G ILED + T WK+
Sbjct: 466 KNYARADEIRTELNGRGIILEDT------PQGTVWKR 496
>gi|183601840|ref|ZP_02963209.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219682755|ref|YP_002469138.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241190331|ref|YP_002967725.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241195737|ref|YP_002969292.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|183218725|gb|EDT89367.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620405|gb|ACL28562.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240248723|gb|ACS45663.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240250291|gb|ACS47230.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
DSM 10140]
gi|295793318|gb|ADG32853.1| cysteinyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
V9]
Length = 545
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 156/529 (29%), Positives = 231/529 (43%), Gaps = 97/529 (18%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+Y+T ++ F+ I P + MYVCG TV HIG+ R + FD++ R
Sbjct: 29 DLKLYDTATHAVSRFEPIKPGEVGMYVCGATVQSAPHIGHIRAAVAFDIIRRWFERLGY- 87
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT++RN+TDIDDKI+++A + ++F L LAPT++P
Sbjct: 88 -KVTFIRNVTDIDDKILDKAAAAG------EDWWARAYHYEREFTHAYNELGVLAPTYEP 140
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M++LI+ II +GHAY ++ FD +S P+YG + +K +
Sbjct: 141 RATGHIIDMVHLIERIIDNGHAYVIRDEHGELTGDVYFDVASWPHYGELTHQKQTAEVDE 200
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
+K++P DF LWKR +P W++P+G
Sbjct: 201 AAAVADRMGPSVDASGDDKYNPADPADLSENKRDPRDFALWKRPKSTDPADARWKTPFGT 260
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A TAN W+H+ +
Sbjct: 261 GRPGWHIECSAMSYRYLDGMFDIHGGGLDLRFPHHENEMAQTRAAGYR--TANRWMHSAW 318
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 319 VTAKGEKMSKSLGNGLSVPVVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEA 371
Query: 331 EILLSKWPQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLA 372
E + + ++A+ +D+N A A+
Sbjct: 372 EAAYERIMNFIGHAADALGEQPSRDEITGVSADNLPVDFVAAMNDDVNVSRATAAIFTQI 431
Query: 373 RESTKNHDLLP----------------IFNASAHILGIEVC-------------KEHLNK 403
RE L A LG++ K
Sbjct: 432 REGNTLLARLAGNADDADRTALRAALVNVRAMLDTLGLDPLASPWIDGGDEAGGDSSALK 491
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ + R K K F+ AD IR L + G +ED
Sbjct: 492 TLGELVDAQLAARAEARKNKDFAKADQIRDALAAAGITIEDGPTGSTWT 540
>gi|15645504|ref|NP_207679.1| cysteinyl-tRNA synthetase [Helicobacter pylori 26695]
gi|2507427|sp|P41259|SYC_HELPY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|2314022|gb|AAD07934.1| cysteinyl-tRNA synthetase (cysS) [Helicobacter pylori 26695]
Length = 465
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|208434794|ref|YP_002266460.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
gi|226710844|sp|B5Z7P5|SYC_HELPG RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|208432723|gb|ACI27594.1| cysteinyl-tRNA synthetase [Helicobacter pylori G27]
Length = 465
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 149/487 (30%), Positives = 234/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKAFKE------NKSIQELSSVYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DT+ +YGS S + + ++
Sbjct: 113 ASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTTKDKDYGSLSVHNSSMEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------IIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVSGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|87310876|ref|ZP_01093002.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
gi|87286391|gb|EAQ78299.1| cysteinyl-tRNA synthetase [Blastopirellula marina DSM 3645]
Length = 507
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 157/517 (30%), Positives = 231/517 (44%), Gaps = 75/517 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL + EFQ + P + +Y+CGPTVY AHIG+ ++FD + R L Y
Sbjct: 1 MTIRVYNTLSKTKEEFQTVTPGKVGIYLCGPTVYAEAHIGHMVGPVIFDTVKRYLVYSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V V NITD+DDK+I++A + S + + ++N ++ + L
Sbjct: 61 E--VNLVVNITDVDDKLIKKATERGIS------MEEVANENIADYLHNLAALGVDQIDQM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT + +I ++ +I G AY + ++ F+ + P YG + R + E G
Sbjct: 113 PKATETMDGIIAMVAELIEKGFAYASEGDVYFEVTKDPEYGKLTNRTV-EAMQGEGGEAA 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK++ EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGGLDLIF
Sbjct: 172 SRKRSPGDFALWKKAKAGEPSWKSPWGDGRPGWHIECSAMSKAILGETFDIHGGGLDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLE----------GRKMSKSNGNFITINELL 292
PHHENEIAQS C + W+HNG L + R+ + G ++ +
Sbjct: 232 PHHENEIAQSECCH-AKPMVKYWMHNGLLRSDPAAGKIGGRAEREGAAEAGGKMSRSGGA 290
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------- 341
IR +L THYR I F+ + + EA I L + +
Sbjct: 291 GGLAKLIERQSGERIRFFLLRTHYRSTILFSEEAIAEAGIGLDSFYRLFERYERLTGESF 350
Query: 342 --------TSKGIIDPA--------------VLSALYNDLNTVSAIQALHKLARESTKNH 379
+G +P L + +D NT A+ L ++AR K
Sbjct: 351 FDLPAAKTRKEGDFEPKKSELLVAIAKHRDAYLEKMDDDFNTGGAVSELFEMARLINKTI 410
Query: 380 D-----------------LLPIFNASAHILGIEVCKEHLNKNISIA-----IEKLVQERL 417
D + ILGI V + + ++ L+ R
Sbjct: 411 DQQKLEGDKSADLTNIKKAFSVLRELTGILGIFVTAPEKSSSGDSELVGQLMQLLIDVRA 470
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ K F +D IR +L + G LED K +
Sbjct: 471 SARQKKDFEMSDVIRDRLTAMGVTLEDRKEGATWRLG 507
>gi|256546103|ref|ZP_05473456.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
gi|256398220|gb|EEU11844.1| cysteine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
Length = 472
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 165/505 (32%), Positives = 248/505 (49%), Gaps = 82/505 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT R+ EF+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R L+Y +
Sbjct: 1 MKIYNTFTRQKEEFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLKYLGND- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII +A ++ S +T K + +++D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKAIKDKIST------KEVTDKYIKAYMEDAKDLNLDEEHTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT + +I ++ ++ AYE+N ++ FD S +YG S + I++ + G
Sbjct: 113 KATETMDDIIEFVKELVDKDCAYESNGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172
Query: 184 HK----KNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+NP DF LWK + E W+SPWG+GRPGWHIECS MS LG+ D+H GG
Sbjct: 173 KDKGKKRNPMDFTLWKATKKEGEVSWDSPWGKGRPGWHIECSTMSKKLLGETIDLHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS +K AN W+HNG + ++G KMSKS GNF T++++
Sbjct: 233 DLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKSLGNFFTLHDI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------- 343
+ + V+R +L YR PI+FT + + +A+ L +
Sbjct: 285 KKEYDLMVVRFWLLSASYRLPINFTREIIEQAKNSLERLNNAKFRMDDLLEKTSGNLKDE 344
Query: 344 -------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFN 386
+ + +DLNT A+ L ++++ + D +F
Sbjct: 345 EKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKLDENSSKEFVEKTRDLFI 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQL 435
+LGIE K+ + I KL++ER IR +L
Sbjct: 405 KLEDVLGIENRKKTDDSIDEDLINKLIEERKEAKKAKDFKKAD-----------EIRDKL 453
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
G +++D + T+W+ K
Sbjct: 454 SEMGILIKDTR------EGTKWELK 472
>gi|282601150|ref|ZP_05980914.2| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
gi|282570019|gb|EFB75554.1| cysteine--tRNA ligase [Subdoligranulum variabile DSM 15176]
Length = 464
Score = 324 bits (830), Expect = 2e-86, Method: Composition-based stats.
Identities = 173/492 (35%), Positives = 244/492 (49%), Gaps = 72/492 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NT+ R+ EF R+YVCGPTVY++ HIGNARPMIVFD L R L Y
Sbjct: 1 MQIFNTMTRQKEEFVPQKEGEYRIYVCGPTVYNYIHIGNARPMIVFDTLRRYLEYCGN-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV NITDIDDK+I++ +QE S + + K +++KD+ L PT +PR
Sbjct: 59 KVYYVSNITDIDDKLIQKGQQEGIS------MQEVARKFEAEYIKDSEGLNVEEPTVRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV---- 179
AT HI ++I ++++++ GHAY N ++ F S P YG S +D+ + G R
Sbjct: 113 ATEHIGEIIKIVKDLVDSGHAYVARNGDVYFRVKSDPGYGKLSHLNLDDLESGNRTLRSQ 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K++PADF +WK + P EP WESPWG GRPGWHIECSAM+ +LG D+H GG D
Sbjct: 173 MDDDLKEDPADFAVWKAAKPGEPYWESPWGHGRPGWHIECSAMARKHLGNTIDLHAGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIAQS CA+ + W+HNGFLN+ KMSKS GNF T+ E+ E
Sbjct: 233 LIFPHHENEIAQSECANGC-TFSRYWMHNGFLNINNEKMSKSAGNFFTVREIAE------ 285
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------- 352
+ IR ML YR P+++TV + + L + +
Sbjct: 286 -KYGYEPIRYFMLTAGYRMPLNYTVDLIESCKNSLERLYTCRDNLDFAIEHAHGTDTALA 344
Query: 353 -----------SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
+A+ +DLNT A+ A+ +E D F+ +L
Sbjct: 345 AKCEEARTKFKTAMDDDLNTPDALAAVFDFVKEINTLSDASDKATLELAAKTFDELTGVL 404
Query: 393 GIEVCKEHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLESKGFI 441
G+ ++ + + LV+ER IR QL G+
Sbjct: 405 GLLYNRKK--DEVPADVTALVEERAAAKKAKDWAKAD-----------AIRAQLTEMGWS 451
Query: 442 LEDYKNPDNGQR 453
+ D +
Sbjct: 452 VTDTAQGPKIAK 463
>gi|15922576|ref|NP_378245.1| cysteinyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|21264015|sp|Q96YC3|SYC_SULTO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|15623366|dbj|BAB67354.1| 471aa long hypothetical cysteinyl-tRNA synthetase [Sulfolobus
tokodaii str. 7]
Length = 471
Score = 323 bits (829), Expect = 2e-86, Method: Composition-based stats.
Identities = 168/486 (34%), Positives = 242/486 (49%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ +I+IYNTL RKI + ++P ++MYVCGPTVYD+ HIG+ R + FD + R LR
Sbjct: 2 ILMQIRIYNTLGRKIQPLETVEPQTVKMYVCGPTVYDYLHIGHGRTFVSFDAMVRYLRLR 61
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++A++ + I T+ ++ T+L
Sbjct: 62 GY--NVIRVQNITDIDDKIIKKAQETGKD------WTEIVDFYTKDYLNALTQLKIEIDQ 113
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PR T HI ++I IQ +I GHAY + + FD S P+YG S K +E G
Sbjct: 114 H-PRVTYHIKEIINFIQKLIDKGHAYVAKSGSVYFDVDSFPSYGLLSGTKKEEWNQGEEF 172
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KKNP DF LWK P EP WESPWG+GRPGWHIECS MS YLG+ FDIHGGG+D
Sbjct: 173 VKE--KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSMRYLGEEFDIHGGGID 230
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS ++ W+H +L + KMSKS GN I +NE L
Sbjct: 231 LIFPHHENERAQSEALLG-KQWVKYWVHVSYLTIRKEKMSKSLGNIIPLNEAL------- 282
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
+ W V+R L +HYR +DF L +A+ L++
Sbjct: 283 KKWGPSVLRYWYLSSHYRSSLDFNEDSLEQAKNALTRLKDAISIIRDVIKEGPKYYSKDE 342
Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLA----------RESTKNHDLLPIFN 386
+ + + +A+ D +T A+ +H++ R+
Sbjct: 343 DIQVQRNIVELIKSFHAAMSEDFDTAKALSYIHEIVSLVFGKIQYSRDFMSAMLAFDALR 402
Query: 387 ASAHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++ G+ + + + + I+ +V+ R L K + +D IR L + G + D
Sbjct: 403 QFNYVFGVMDEEFYPTYEMLGKVIDAVVEIRNQLRMKKMYDLSDQIRAILANAGVKVLDS 462
Query: 446 KNPDNG 451
K+
Sbjct: 463 KDKSTW 468
>gi|227829111|ref|YP_002830890.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|227455558|gb|ACP34245.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
Length = 470
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 169/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I+IYN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++++ + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMKFYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|15611885|ref|NP_223536.1| cysteinyl-tRNA synthetase [Helicobacter pylori J99]
gi|6831687|sp|Q9ZKW6|SYC_HELPJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|4155389|gb|AAD06399.1| CYSTEINYL-TRNA SYNTHETASE [Helicobacter pylori J99]
Length = 465
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 235/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S + + ++
Sbjct: 113 ASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|308183038|ref|YP_003927165.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
gi|308065223|gb|ADO07115.1| cysteinyl-tRNA synthetase [Helicobacter pylori PeCan4]
Length = 465
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANSPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|77417496|sp|Q7US70|SYC_RHOBA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 537
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 159/536 (29%), Positives = 235/536 (43%), Gaps = 93/536 (17%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I++YNTL + F + + MY+CGPTVY +HIG+ ++FD + R L Y
Sbjct: 17 QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT+V NITD+DDK+I ++++ +S I + T ++ + L H
Sbjct: 77 YE--VTWVVNITDVDDKLIGKSKERGI------PMSQIAVEMTADYLANLRELGVNQIDH 128
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+H+PQ+I I ++ G AY + ++ FD + P YG S R +++ + G
Sbjct: 129 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVED-QQGEGGGA 187
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGGLDL+
Sbjct: 188 AAKKRNPGDFALWKSARPGEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 247
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLN--LEGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQS C W+HNG + +G+ KS+ ++ G
Sbjct: 248 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 306
Query: 300 R---------------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+ S IR +L T YR I + + L EA L + +
Sbjct: 307 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 366
Query: 345 GIID---------------------------------PAVLSALYNDLNTVSAIQALHKL 371
I L+A+ +D NT +AI L
Sbjct: 367 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 426
Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
R ++ D + + +LG+ E +
Sbjct: 427 LRTLNRHIDANQLAAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 486
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + L+ R + K +++ D IR +L G L D K T W++K
Sbjct: 487 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 536
>gi|317009539|gb|ADU80119.1| cysteinyl-tRNA synthetase [Helicobacter pylori India7]
Length = 465
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 231/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|301167823|emb|CBW27408.1| cysteinyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 487
Score = 323 bits (829), Expect = 3e-86, Method: Composition-based stats.
Identities = 158/499 (31%), Positives = 230/499 (46%), Gaps = 66/499 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYNTL R EF+ + +++Y+CGPTVYD HIGN R I F+++ L
Sbjct: 1 MSLKIYNTLSRSKEEFKPLVEGKVKLYLCGPTVYDLLHIGNFRGAITFNLVRNWLELSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V N TD+DDKII+RA E + I+ K +F KD RL TH
Sbjct: 61 D--VTFVYNYTDVDDKIIKRANDEGVEPIV------ISEKYIAEFEKDFNRLGLKKHTHN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ T + ++I ++ +I + AYE + E+ + + +YG S++ +DE G RV
Sbjct: 113 PKVTEFMDEIINYVETLIKNDKAYEIDGEVFYAIDNYTDYGKLSKKNLDELNAGQRVEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM LG+ DIHGGG+DLIF
Sbjct: 173 SRKRNPYDFVLWKPSKEGEPHWTSPWGEGRPGWHIECSAMIKAILGETIDIHGGGIDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQ + K N W+HN F+NL+ KMSKS GN IT ++ +
Sbjct: 233 PHHENEIAQGEGCN-CTKYCNYWMHNEFINLKDEKMSKSLGNVITGRAFMD-------QY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
V++ ML HYR + T +++ + L + +T + I
Sbjct: 285 HPEVLKFLMLSAHYRSNFNVTDEKIHQVISGLRRVYETLATVDTILDTFEKSESGKVNKN 344
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPI 384
D + +L +D +T + + ++ R
Sbjct: 345 FQTTLTNSDAKIKKSLDDDFSTAEVVATIFEVVRTFNGLNLLKKKKDVNSWTTAKAFKDW 404
Query: 385 FNASAHILGIEVCKEH-----------LNKNIS-IAIEKLVQERLILLKMKKFSSADYIR 432
++ + + KN+ I +LV+ R + K + AD R
Sbjct: 405 IQRYGQMMALFQEEPVQFLSSIDDIMIKEKNLDREKILELVKMREEARENKDWDKADEAR 464
Query: 433 KQLESKGFILEDYKNPDNG 451
L + G D
Sbjct: 465 DALHAMGIDFSDTPEGVKW 483
>gi|87124845|ref|ZP_01080693.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
gi|86167724|gb|EAQ68983.1| cysteinyl-tRNA synthetase [Synechococcus sp. RS9917]
Length = 506
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 168/536 (31%), Positives = 234/536 (43%), Gaps = 112/536 (20%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ NTL R++ F+ + + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MALRFTNTLSRRMEPFRPLKEGQVSIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TDIDDKI+ RA E S + ++ +N F D L L P
Sbjct: 61 --AVTFVQNFTDIDDKILNRAADEGSS------MEAVSERNIAAFHADMEALGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---- 178
PRAT + + LI + G AY A+ ++ F YG S R + EQ+
Sbjct: 113 PRATRCLDAIRDLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLGEQQTNAEGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGAGRPGWHIECSAMVREELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A E A +W+HNG +N+ G KMSKS GNF TI LLE+
Sbjct: 233 DLVFPHHENEIAQSEAASGQE-LARLWLHNGMVNVGGEKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------- 342
A +RL +L HYR+P+DF+ L A
Sbjct: 288 --GLSAMTLRLFVLQAHYRKPLDFSSDALEAASSGWKGLNAALNLGTGHGTALGWPNAAP 345
Query: 343 ---------------SKGIIDP--------AVLSALYNDLNTVSAIQALHKLARESTKNH 379
KG DP ++A+ +DLN+ A+ + +LAR
Sbjct: 346 LPKGAVVEGSIGLLDQKGSTDPDPLLGLRQRFIAAMDDDLNSSGALAVVFELARPLRGLA 405
Query: 380 DLLP--------------------IFNASAHILGIEVCKEHLNKNISIAIE--------- 410
+ L + A +LG+ + +++
Sbjct: 406 NRLDRGDDAGITASESAVLRSRWLLLRELAAVLGLRAEAPPQAEASKSSVDTTAIEAAIA 465
Query: 411 --------KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K ++ AD IR +L ++G L D +T W+
Sbjct: 466 ARQAAKQAK------------NYAEADRIRSELTAQGIELIDKPGG-----ITEWR 504
>gi|229818303|ref|ZP_04448584.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
20098]
gi|229784173|gb|EEP20287.1| hypothetical protein BIFANG_03603 [Bifidobacterium angulatum DSM
20098]
Length = 548
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 154/533 (28%), Positives = 225/533 (42%), Gaps = 102/533 (19%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++K+Y+T ++ F I P + MYVCG TV HIG+ R + FD++ R +
Sbjct: 30 RLKLYDTASHAVSTFTPIKPGEVGMYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGYQ 89
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI+++A E ++F + + L L PT +P
Sbjct: 90 --VTFVRNVTDIDDKILDKAAAEG------QQWWARAYHYEREFSQAYSDLGVLPPTVEP 141
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ--- 173
RAT H+ MI +IQ II +GHAY + + FD +S P+YG + +K
Sbjct: 142 RATGHMADMIDMIQRIIDNGHAYVVRGDDGKPTGNVYFDVASWPHYGELTHQKQTAVADA 201
Query: 174 --------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK +P W +P+G
Sbjct: 202 ASEVADAMGPSVDNAGDDKYNPVDPADASPDKHDPRDFALWKAPKDSDPLDARWNTPFGT 261
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ +
Sbjct: 262 GRPGWHIECSAMSHRYLKDGFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAW 319
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 320 VTAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGGVQYRSMLEWSDQTLAEA 372
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + ++A+ +D+N A A+
Sbjct: 373 QSAYDRISNFIERAGIAIGEQPSRTEVASVPADALPADFVAAMNDDINVSGATAAIFTAI 432
Query: 373 RESTKNHDLLPI-----------------FNASAHILGIEVCKEHL-------------- 401
R L A LG++ E
Sbjct: 433 RSGNTLLSKLADRADSDAAKAEVREVLLGVRAMLDTLGLDPLAEPWVNGGAAGGAAGEGE 492
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + I + + R K K F+ AD IR L + G +ED
Sbjct: 493 SAEHDVLDSLIREQLTARAEARKAKDFAKADAIRDALNAAGIAIEDGPQGSTW 545
>gi|332673723|gb|AEE70540.1| cysteine--tRNA ligase [Helicobacter pylori 83]
Length = 465
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE +++R + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEKRKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|227485588|ref|ZP_03915904.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
gi|227236454|gb|EEI86469.1| cysteinyl-tRNA synthetase [Anaerococcus lactolyticus ATCC 51172]
Length = 472
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 165/500 (33%), Positives = 243/500 (48%), Gaps = 78/500 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNTL R F+ I+ + I+MYVCGPTVYD+ HIGNARP+++FD R + Y +
Sbjct: 1 MKIYNTLSRTKEVFKPIEENKIKMYVCGPTVYDYMHIGNARPLVIFDTFRRFMTYRGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT-HQP 123
VTYV N TD+DDKII+++ E + +T + Q++ D L P
Sbjct: 60 -VTYVVNFTDVDDKIIKKSIVEGITT------KEVTDRYIAQYMIDAKALNLDEEDTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT + +I ++ +I G AY ++ ++ FD S +YG SR+ +D+ G
Sbjct: 113 RATEVMDDIINFVKGLIDKGMAYVSDGDVYFDVSKKTDYGKLSRKNLDDLVHGASQRLDD 172
Query: 184 HK----KNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ KNPADF LWK + E W+SPWG+GRPGWHIECS M+ LG DIH GG
Sbjct: 173 NDAGKKKNPADFTLWKATKLSGEVAWDSPWGKGRPGWHIECSTMNKKILGDTIDIHAGGE 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS + ++ AN W+HNG + + G KMSKS GNF T++++
Sbjct: 233 DLEFPHHENEIAQSEALNDVK-FANYWMHNGMIQVNGSKMSKSVGNFFTLDDI------- 284
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
+ + IR +L T YR+PI+FT + + +A+ L + +
Sbjct: 285 KKEYDLMTIRFWLLTTSYRQPINFTKEIIDQAQASLDRLNNAYFKAEELLAKTSEKEISS 344
Query: 348 ------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIF 385
+ +S + +DLNT AI L LA+ N + +
Sbjct: 345 VEKDLLQILVDKENEFVSVMEDDLNTADAITVLFDLAKFINTNLEGDSSKDFVEKTFETY 404
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERL-----------ILLKMKKFSSADYIRKQ 434
+ +LG+ K+ ++ IE+ + ER IR
Sbjct: 405 SRLYDVLGLLAKKKE-SEVDEAFIEEKIAERNSAKKAKDFAKAD-----------KIRDD 452
Query: 435 LESKGFILEDYKNPDNGQRM 454
L+ G IL+D + +
Sbjct: 453 LKEMGIILKDTREGTKWEIG 472
>gi|327540430|gb|EGF27015.1| cysteinyl-tRNA synthetase [Rhodopirellula baltica WH47]
Length = 539
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 159/536 (29%), Positives = 235/536 (43%), Gaps = 93/536 (17%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I++YNTL + F + + MY+CGPTVY +HIG+ ++FD + R L Y
Sbjct: 19 QPAIRVYNTLSKTKEPFLPLRAPRVGMYLCGPTVYAESHIGHMVGPVIFDTIKRYLTYSG 78
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT+V NITD+DDK+I ++++ +S I + T ++ + L H
Sbjct: 79 YE--VTWVVNITDVDDKLIGKSKERGI------PMSQIAVEMTADYLANLRELGVNQIDH 130
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT+H+PQ+I I ++ G AY + ++ FD + P YG S R +++ + G
Sbjct: 131 LPRATDHMPQIIAFIGSLESKGFAYAIDGDVFFDVTKDPGYGQLSNRSVED-QQGEGGGA 189
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK + P EP W+SPWG GRPGWHIECSAMS LG+ FDIHGGGLDL+
Sbjct: 190 AAKKRNPGDFALWKSARPDEPFWDSPWGEGRPGWHIECSAMSHEILGETFDIHGGGLDLM 249
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLN--LEGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQS C W+HNG + +G+ KS+ ++ G
Sbjct: 250 FPHHENERAQSTCCHGA-PMVKYWMHNGLMRAGEKGKVGGKSDRENAAAEAASVEEQASG 308
Query: 300 R---------------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+ S IR +L T YR I + + L EA L + +
Sbjct: 309 KISRSKGAGGLADLIRSQTGERIRFFLLRTQYRSTIVYNEETLAEAGTSLEAFYRYFDRF 368
Query: 345 GIID---------------------------------PAVLSALYNDLNTVSAIQALHKL 371
I L+A+ +D NT +AI L
Sbjct: 369 AEITGDSFYDLSAATRRADGGFDPAGDALLTEIHAIREKFLAAMDDDFNTGAAISVLFDA 428
Query: 372 ARESTKNHD--------------------LLPIFNASAHILGIEVC-------KEHLNKN 404
R ++ D + + +LG+ E +
Sbjct: 429 LRTLNRHIDANQLVAGADAKSPAVESLVKATSVIAELSRVLGLFAKPPATSGGDEADAEL 488
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + L+ R + K +++ D IR +L G L D K T W++K
Sbjct: 489 LDSVVHLLINLRKEARERKDYATGDAIRDRLADLGVALLDKK------EGTSWERK 538
>gi|188527712|ref|YP_001910399.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
gi|229558719|sp|B2UU37|SYC_HELPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|188143952|gb|ACD48369.1| cysteinyl-tRNA synthetase [Helicobacter pylori Shi470]
Length = 465
Score = 323 bits (828), Expect = 3e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|110639787|ref|YP_679997.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|123058501|sp|Q11PK9|SYC_CYTH3 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110282468|gb|ABG60654.1| cysteinyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
Length = 497
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 157/502 (31%), Positives = 238/502 (47%), Gaps = 65/502 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+ +YNTL RK F+ I ++ MYVCGPTVY H+G+AR I FD+++R L++ +
Sbjct: 5 KLVVYNTLTRKKEVFEPIHAPHVGMYVCGPTVYGEGHLGHARSAITFDIVFRYLQHL--K 62
Query: 64 KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V YVRNITD+ +DKI ++A+ E I + T+ + +
Sbjct: 63 YQVRYVRNITDVGHLEHDADEGEDKIAKKAKLEKVE------PMEIVQRYTEYYHDALRK 116
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR----K 169
L L P+ +P A+ HIP+ I +++ I+ G+AYE + FD N +
Sbjct: 117 LNVLPPSIEPTASGHIPEQIRMVEEILSSGYAYENTGSVYFDVEKFTNDKNKYGHLSGRI 176
Query: 170 IDEQKMGTRVPEKYHKKNPA-DFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYL 227
+++ GTR + H K + DF LWK ++P W+SPWG+G PGWH+ECSAMS+ YL
Sbjct: 177 LEDLISGTRSLDGQHTKKSSADFALWKLASPEHIMKWDSPWGKGFPGWHLECSAMSTKYL 236
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G+ FDIHGGG+DL+FPHHE EIAQS A++ E A W+HN + + G+KM KS GNFIT
Sbjct: 237 GETFDIHGGGMDLMFPHHECEIAQSVAANKKEP-AKYWLHNNMITINGQKMGKSLGNFIT 295
Query: 288 INELLETKK-FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+NEL +++ IR L HYR +DF+ L A K
Sbjct: 296 LNELFTGNHTLLEQAYSPMTIRFFTLQAHYRSTLDFSNDALKAANKAFRKVMNGMKMLNS 355
Query: 347 ID--------------------PAVLSALYNDLNTVSAIQALHKLAREST--------KN 378
++ + +D NT I +L L ++
Sbjct: 356 LEYSTDIVEQDQALNDEINKIIADCYKGMSDDFNTAITIASLFNLIKKINVFYLQQKSTA 415
Query: 379 HDLLPIFNASA--------HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
F +LG+ + + N I+ L+ + K++ D
Sbjct: 416 VLSKETFEHMKTSYTTLVHDVLGLV---DEVAVNPEGLIKGLLDLYKEAKENKQYDKVDQ 472
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
IR + +G ++D K+ +
Sbjct: 473 IRAYFKQQGLAIKDMKHGIDWA 494
>gi|332669126|ref|YP_004452134.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
gi|332338164|gb|AEE44747.1| cysteinyl-tRNA synthetase [Cellulomonas fimi ATCC 484]
Length = 478
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 160/495 (32%), Positives = 238/495 (48%), Gaps = 60/495 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y+T R + +F + + +Y+CG TV H+G+ R + FDVL R LR
Sbjct: 5 SLRLYDTATRTVRDFVPLTAGEVGIYLCGATVQAPPHVGHVRSSVAFDVLVRWLRRTG-- 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT VRN+TDIDDKI+ +A + N + F L L PT++P
Sbjct: 63 HRVTLVRNVTDIDDKILAKAAAAG------EPWWAWAMTNERAFTSAYDALGVLPPTYEP 116
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK-MGTRVPE 181
RAT H+P M+ L+ ++ GHAY A ++ FD S P+YG+ + +++D+ P+
Sbjct: 117 RATGHVPAMVELMTRLVERGHAYAAGEGDVYFDVRSFPDYGALTNQRVDDMVPAPDGAPD 176
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
KK+P DF LWK + P EP W++P+GRGRPGWH+ECSAM+ YLG FDIHGGGL
Sbjct: 177 GVVKKDPRDFALWKAAKPGEPETAAWDTPYGRGRPGWHLECSAMARRYLGDGFDIHGGGL 236
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+HNG++ G KMSKS GN + ++ +L+ +
Sbjct: 237 DLRFPHHENEQAQSHAAGY--PFARYWLHNGWVTQGGTKMSKSLGNGLLVDVVLQQVR-- 292
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
A V+R AM YR +++T L EAE +
Sbjct: 293 -----AVVVRYAMTTVQYRSMLEWTDDTLREAEAAWDRLAGFVERATERVGAVDAEEVAA 347
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIE 395
+ A+ +DLN A+ +H+ R+ + A +LG++
Sbjct: 348 APVPQDFADAMDDDLNVPKAMAVVHEWLRQGNSALADDALDDVRATLVGLRAMLDVLGLD 407
Query: 396 VCKEHL---------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
K + + V+ R + F++AD IR +L + G ++ED
Sbjct: 408 PGSPQWATRGGDERYAKALDALVAGQVEARAAARAARDFATADAIRDRLTAAGVVVEDSP 467
Query: 447 NPDNGQRMTRWKQKP 461
RW +P
Sbjct: 468 TGA------RWSLRP 476
>gi|89897982|ref|YP_515092.1| cysteinyl-tRNA synthetase [Chlamydophila felis Fe/C-56]
gi|109894891|sp|Q255U1|SYC_CHLFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|89331354|dbj|BAE80947.1| cysteinyl tRNA synthetase [Chlamydophila felis Fe/C-56]
Length = 476
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 154/486 (31%), Positives = 233/486 (47%), Gaps = 52/486 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + +YNT R F A + +++Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 8 SQNLYLYNTATRTKELFSASNAP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V ++ NITD+DDK + A N ++ T+ Q F +D L L
Sbjct: 65 FGYSVKHIMNITDVDDKTLAGA------CRKNISLEEYTAPFIQAFFEDIAELNILPADV 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
P AT++IPQMI IQ ++ AY + + F P YG S+ K+ + + +RV
Sbjct: 119 YPHATHYIPQMIKAIQKLLDENIAYIGQDSSVYFSIKKFPTYGKLSQLKLQDLQCCSRVT 178
Query: 181 EKYHKKNP-ADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +DF+LWK WESP+G+GRPGWH+ECS M+ LG DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYDEQRDGHIYWESPFGKGRPGWHLECSIMAMELLGSSIDIHAG 238
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D IFPHHENEIAQS + + W+H+ L ++G+KMSKS GNF T+ LL+
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-KPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
R + IR +L +HYR ++FT + L L + + P +
Sbjct: 295 ---RGFSGEEIRYLLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRLENPYPESTTISD 351
Query: 357 ------------------NDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
NDLN +A+ AL ++ D +L +
Sbjct: 352 EIDQQGKTFLKAFSDSIANDLNIAAALAALFDFIHQTNSFIDKSKFTQADANYILDLLKK 411
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LGI + I + +LV++R + + K ++ AD R Q+ S G+++ED K+
Sbjct: 412 INTVLGILQF--SATQEIPDEVMQLVEKREVARREKNWAQADAFRDQVASLGYLIEDSKS 469
Query: 448 PDNGQR 453
++
Sbjct: 470 GPKVKK 475
>gi|308062209|gb|ADO04097.1| cysteinyl-tRNA synthetase [Helicobacter pylori Cuz20]
Length = 465
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|323473579|gb|ADX84185.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323476226|gb|ADX81464.1| cysteinyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 470
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 168/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I+IYN+L RK+ EF I+P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRIYNSLGRKLEEFNTINPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLK 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII++++ + I + T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQDTGKD------WNEIVNYYTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T+HI ++I +Q +I GHAY + + FD + P+YG S K +E G
Sbjct: 112 IHPRVTHHIKEIINFVQKLIDKGHAYVAPSGSVYFDVDTYPDYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ+ EK + W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LVFPHHENERAQTEALTG-EKWVSYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + I
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRNIISEGPKFYAKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD-LLPIFNASAHILGIE 395
+ +A+ ND +T +A+ +H++ R A +
Sbjct: 342 DIKVYREILNNLDSFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFEALS 401
Query: 396 VCKEHLNKNISI----------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
E I+ +V R L +M+ + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKVIDAVVDIRNQLRQMRLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|284161561|ref|YP_003400184.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284011558|gb|ADB57511.1| cysteinyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 474
Score = 323 bits (828), Expect = 4e-86, Method: Composition-based stats.
Identities = 167/489 (34%), Positives = 240/489 (49%), Gaps = 63/489 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +++ E + +RMYVCG T YD++HIG+AR + FDVL R L Y E
Sbjct: 7 RLYNTLTKEMEELKL--DKTVRMYVCGITAYDYSHIGHARTFVFFDVLRRYLEYEGHE-- 62
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N TD+DDKI+ RA E + I K +F+KD + L P + P+
Sbjct: 63 VIYVQNFTDVDDKIVRRAVNEGKTQ------KEIAEKFISEFLKDMSALNVKMPDYMPKV 116
Query: 126 TNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
T+HI ++ +Q +I G+AY E ++ F + +YG S ++E R+
Sbjct: 117 TDHIQDIVQAVQKLIELGYAYEVENEHGKDVYFHVPAFESYGKLSGMSLEELN-RHRIEP 175
Query: 182 KYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
K++ DF LWK + + ++SPWG GRPGWHIECS MS+ YLG FDIHGGG
Sbjct: 176 NPKKRDVKDFALWKSAKEDDFKAKAVFDSPWGYGRPGWHIECSVMSAKYLGVPFDIHGGG 235
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHENE AQS +E WIH F+ ++G KMSKS GN + I ++L
Sbjct: 236 KDLIFPHHENERAQSYALFGVEP-VRYWIHCDFVMIKGEKMSKSLGNIVKIRDVLNV--- 291
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------- 346
+ V+R +L YR P+D++ + L A+ + T + +
Sbjct: 292 ----YGGEVLRYFLLTAFYRSPLDYSEKSLERAKNSYNYLKNTLINLDMEISALKSYGED 347
Query: 347 -----IDP----AVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNAS 388
DP + + +NT A+ H A+ KN F
Sbjct: 348 RKDMGFDPSSFLKEFESAMDIMNTPKALAVFHSFAKAINKNLYDMSLKELESCFETFMTF 407
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +LG+ E + IE LV+ER + K K F AD IR++L KG +L D
Sbjct: 408 SKVLGLFENYERIPTLPKELIE-LVKEREVARKEKDFERADKIREKLREKGIMLIDT--- 463
Query: 449 DNGQRMTRW 457
+ TRW
Sbjct: 464 ---PKGTRW 469
>gi|317182191|dbj|BAJ59975.1| cysteinyl-tRNA synthetase [Helicobacter pylori F57]
Length = 465
Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 231/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N ++ ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|317180259|dbj|BAJ58045.1| cysteinyl-tRNA synthetase [Helicobacter pylori F32]
Length = 465
Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 235/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+++ +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKSKQKVPFESLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N ++ ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + ++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|224031283|gb|ACN34717.1| unknown [Zea mays]
Length = 561
Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 179/547 (32%), Positives = 254/547 (46%), Gaps = 118/547 (21%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ ++N+ ++ FQ + MYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 32 PQLLLFNSFTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 91
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII+RA + + ++ ++S+ +F+ D T L CL PT +
Sbjct: 92 E--VEYVRNFTDIDDKIIKRANERG------ETVTSLSSQFINEFLLDMTELQCLPPTCE 143
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HI +I LI I+ +G AY ++ F S P Y S S RK D+ + G RV
Sbjct: 144 PRVTEHIEHIIKLITQIMENGKAYAIEGDVYFSVESFPEYLSLSGRKFDQNQAGARVAFD 203
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIF
Sbjct: 204 TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIF 263
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A + W+HNGF+N + +KM+KS+ NF TI +++ +
Sbjct: 264 PHHENELAQSRAAY-PDSEVKCWMHNGFVNKDDKKMAKSDNNFFTIRDIIAL-------Y 315
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
+R ++ THYR ++ + Q L A + QT +
Sbjct: 316 HPMALRFFLMRTHYRSDVNHSDQALEIASDRVYYIYQTLYDCEEVLATYREEGTSLPVPS 375
Query: 348 ---------DPAVLSALYNDLNTVSAIQALH-KLARESTKNHDLL--------------- 382
L + NDL T + +L + + + L
Sbjct: 376 EEQNLIGKHHSEFLKHMSNDLKTTDVLDRCFMELLKAINSSLNDLKKLQQKIEQQKKKQQ 435
Query: 383 ---------------------------------PIFNASAHILGIEVCKEHLNKNISIAI 409
ILG+ + +++ +
Sbjct: 436 QQKKQQQQKQQQQKQQQLQKQPEDYIQALIALETELKNKLSILGLMP-----SSSLAEVL 490
Query: 410 EKLVQE------------------RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
++L + R + K K+F +D IRK L +KG L D
Sbjct: 491 KQLKDKSLKRAGLTEEQLQEQIEQRNVARKNKQFEISDGIRKNLATKGIALMD------E 544
Query: 452 QRMTRWK 458
T W+
Sbjct: 545 PSGTVWR 551
>gi|320105196|ref|YP_004180787.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
gi|319752478|gb|ADV64238.1| cysteinyl-tRNA synthetase [Isosphaera pallida ATCC 43644]
Length = 497
Score = 323 bits (827), Expect = 4e-86, Method: Composition-based stats.
Identities = 169/515 (32%), Positives = 238/515 (46%), Gaps = 79/515 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I ++NTL + + ++P +RMYVCGPTVY +H+G+ ++FD L R L Y
Sbjct: 1 MTIHLHNTLSQTKEPLRTLEPGKVRMYVCGPTVYSASHVGHMVGPVIFDTLKRFLTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT+V NITDIDDK+I +A ++ ++ + + T +VK L H
Sbjct: 61 Q--VTWVVNITDIDDKLIVQANKDGVTV------KSLAEQVTADYVKCLEALGVDGIDHM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++ + Q +I G+AY + ++ FD + YG S R + G RV
Sbjct: 113 PKATEHIDHILEMTQGLIDKGYAYASGGDVYFDVTKAEEYGKLSHRDPEALLAGNRVEPS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HK++P DF LWK + P EP WESPWG GRPGWHIECSAMS LG DIHGGGLDL+F
Sbjct: 173 SHKRHPGDFALWKAAKPGEPFWESPWGPGRPGWHIECSAMSRSLLGDQIDIHGGGLDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+ QS C + A W+HNG L +GRK+SKS+ + + + +
Sbjct: 233 PHHENEVVQSECFTGRKPFATFWLHNGLLTKDGRKISKSD------PDTIVLMRDLLGKY 286
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------------- 343
+R LM HYR P D+ QRL E E L + S
Sbjct: 287 QPDTLRALFLMGHYRRPTDYGNQRLDEIERGLQAFFIFSERFERITGRSFYTLPAPQTDS 346
Query: 344 KGIIDP--------------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----- 384
+G DP L AL +D NT L +L R + D + +
Sbjct: 347 EGEFDPGDSDFLKTIRDHRLKFLEALDDDFNTGGGFGELFELLRTLNRFADRVGLERADA 406
Query: 385 ----------------FNASAHILGIEVCKE-----HLNKNISIAIEKLVQERLILLKMK 423
+ G+ ++ + + ++ R L K K
Sbjct: 407 PHRADALAQFERGVTVLRELTRLFGLFRAAPRSKTTGDDQLTAGLMRLVIDLRASLRKEK 466
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
F+ AD IR++L LED G TRW+
Sbjct: 467 NFALADEIRRRLAELNVTLED------GPGGTRWR 495
>gi|317178758|dbj|BAJ56546.1| cysteinyl-tRNA synthetase [Helicobacter pylori F30]
Length = 465
Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 234/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N ++ ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILKCMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKN 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + ++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADRIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|156974741|ref|YP_001445648.1| cysteinyl-tRNA synthetase [Vibrio harveyi ATCC BAA-1116]
gi|156526335|gb|ABU71421.1| hypothetical protein VIBHAR_02459 [Vibrio harveyi ATCC BAA-1116]
Length = 457
Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats.
Identities = 151/471 (32%), Positives = 228/471 (48%), Gaps = 37/471 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K++++NTL R + F I+ + +Y CGPTVYD+AH GN R + DVL R L
Sbjct: 3 QPKLQLFNTLGRTLEPFNTIETGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V +V NITD+ +DK+ + AR++ N + I F+ D
Sbjct: 63 YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDVFLDDL 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
RL + P+ RAT HI + I + + G Y+ ++ + FD++ +P+YG ++ +
Sbjct: 115 NRLNIIEPSIICRATEHIQEQIEFVLELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDRE 174
Query: 172 EQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV KK+P DF LWK TP + WESPWG G PGWHIECSAM+ YLG+
Sbjct: 175 GLEAGIRVEMAE-KKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGE 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
VFDIH GG D I HH NEIAQ + AN W+H FL L K+SKS +
Sbjct: 234 VFDIHVGGEDHIPVHHTNEIAQCQAKNG-HVQANYWLHGFFLQLNKEKISKSGTS----- 287
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGI 346
L + + R +L +HYR + FT + L A+ L + G
Sbjct: 288 --LRLDALIEKGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKASALPEGGK 345
Query: 347 IDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+D + NDL AI + +L + + D + G+E+ +
Sbjct: 346 VDQTNVERFMSLINNDLAMPQAIALMWELLGSALNDADKKATARYFDRVFGLEL-DKVEE 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV+ RL + K K++ AD IR+++ G+ + D + +
Sbjct: 405 EEIPSEILELVELRLQMKKQKEYQQADEIRQKVAELGYRINDAGDGSTVSK 455
>gi|227547937|ref|ZP_03977986.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
gi|227079948|gb|EEI17911.1| cysteine--tRNA ligase [Corynebacterium lipophiloflavum DSM 44291]
Length = 485
Score = 323 bits (827), Expect = 5e-86, Method: Composition-based stats.
Identities = 145/479 (30%), Positives = 227/479 (47%), Gaps = 49/479 (10%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T R+ F+ + ++ +Y+CG T HIG+ R + FD++ R +
Sbjct: 21 RIFDTSARRSRVFEPVREGHVSIYLCGATPQSSPHIGHLRSGVAFDIVRRWFLAKGYD-- 78
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +VRN+TDIDDKI+ +A + S ++F + L L P+ +PRA
Sbjct: 79 VAFVRNVTDIDDKILAKAAENG------RPWWEWVSTYEREFTRAYNLLGVLPPSVEPRA 132
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T H+ QM+ ++ +I +G AYEA + FD ++ I ++ P +
Sbjct: 133 TGHVTQMVDYMRRLIDNGFAYEAAGSVYFDVAAWVRAEGSDYGSISGNRVEEMEPGEPDN 192
Query: 186 ---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ P DF LWK + P EP W +PWG GRPGWHIECSAM++ YLG FDIH GGLDL F
Sbjct: 193 RGKRGPHDFALWKAAKPGEPSWPTPWGEGRPGWHIECSAMATWYLGGSFDIHAGGLDLQF 252
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS A A W+HN ++ + G KMSKS GN ++I+ +L T +
Sbjct: 253 PHHENEQAQSHAAGDG--FATYWMHNHWVTMAGEKMSKSLGNVLSIDNMLSTVR------ 304
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPAVLSALYN 357
+R + HYR ++++ + L+EA + G P AL +
Sbjct: 305 -PVELRYYLGSAHYRSVLEYSPEALSEAAAGYRRIEDFVARAGTPEKTTWTPQFEQALND 363
Query: 358 DLNTVSAIQALHKLARESTK---------NHDLLPIFNASAHILGIEVCK---------- 398
D + A+ +H RE K ++ A A +LG++ +
Sbjct: 364 DFSVPKALAEIHNHVREGNKALAAGDGARASEIAGGVRAMAAVLGVDPGEWARAAGEGVG 423
Query: 399 -----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E NK + + + ++ R K ++SAD +R +L + G + D +
Sbjct: 424 GASSSEAANKALDVLVAAELERRAAARAEKDWASADAVRDRLAAAGIDITDTADGPQWA 482
>gi|187919716|ref|YP_001888747.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187718154|gb|ACD19377.1| cysteinyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 462
Score = 322 bits (826), Expect = 5e-86, Method: Composition-based stats.
Identities = 149/469 (31%), Positives = 212/469 (45%), Gaps = 38/469 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + EF I P ++ +Y CGPTVYD AHIGN R + DVL R L
Sbjct: 1 MPLRLYDTWTRTVREFTPIHPDHVGLYCCGPTVYDHAHIGNLRTYVFEDVLRRALVLNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+ + +R+ ++ I + T F+ D
Sbjct: 61 --NVRHVVNITDVGHLVSDADEGEDKMEKGSRRTG------ESAWAIAERYTAAFMNDWR 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P RAT+HI + I I + +G Y + + FDTS +YG +R +
Sbjct: 113 ALNLLEPALWCRATDHIAEQIDFIAELERNGFTYRTADGVYFDTSRQDDYGYLARLDVAG 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV K+ DF LWK S P + W+SPWGRG PGWHIECSAMS+ YL
Sbjct: 173 LQAGKRVAPGE-KQRATDFALWKFSPPGATRQMEWDSPWGRGFPGWHIECSAMSAKYLSP 231
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG D I HH NEIAQ+ + AN W+H FL L+ KMSKS G
Sbjct: 232 WFDIHCGGEDHIPVHHSNEIAQTQARYGT-RLANFWMHGHFLLLDAGKMSKSGG------ 284
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA-------EILLSKWPQTST 342
+ L + R R L HYR + F+ L A ++WPQ
Sbjct: 285 DFLRLQTLSERGNDPLAYRYLCLSAHYRSSLRFSEAALDAAQAALDRLRRSYARWPQGGK 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+ + +DLN A+ L + R + +LG+ +
Sbjct: 345 PDAASVARFKAEVDHDLNLPRALAVLWDVVRSDLPPATRRASVDCFDVVLGLGLADWKDV 404
Query: 403 K--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ I L +R K++S AD +R + + G+++ED
Sbjct: 405 DTPELPAEIAALADQRERARAAKQWSEADRLRDVMTAAGWLVEDSAGGQ 453
>gi|261415170|ref|YP_003248853.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261371626|gb|ACX74371.1| cysteinyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|302326975|gb|ADL26176.1| cysteine--tRNA ligase [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 484
Score = 322 bits (826), Expect = 7e-86, Method: Composition-based stats.
Identities = 154/499 (30%), Positives = 217/499 (43%), Gaps = 57/499 (11%)
Query: 3 KKIKIYNTLERKITEFQ-AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ YNT RK F +RMY CGPTVY FAHIGN R I D L R L YY
Sbjct: 1 MALQFYNTASRKKELFTLPEGVPAVRMYCCGPTVYHFAHIGNLRTYIFEDFLVRTLNYYG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V ++ NITD+ DDK+ + A +E S+ I T F+ D
Sbjct: 61 Y--KVNHIVNITDVGHLTSDGDTGDDKMEKGAAREGKSV------WDIAKFYTDAFMADW 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
RL PT RAT+HI + I L++ + G Y ++ I FD+ P Y F+R ++
Sbjct: 113 HRLNIQEPTRWTRATDHIQEQIDLVKTLEEKGFTYRTSDGIYFDSLKFPRYADFARLDVE 172
Query: 172 EQKMGTRVPEKYHKKNPADFILWKR---STPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+ G+R+ K N DF LWK W+SPWG G PGWHIECSAM+ Y G
Sbjct: 173 NLRKGSRIDMGE-KHNATDFALWKFSPTDKKRAMEWDSPWGVGFPGWHIECSAMAMKYNG 231
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM-------SKS 281
DIH GG D I HH NEIAQS CA+ ++ + W+H FL + K
Sbjct: 232 PTLDIHCGGTDHIRVHHTNEIAQSECANGVQ-FSRFWMHGEFLRTASEEKLEDGTTEQKF 290
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-- 339
+ E L R + R L +HYR ++FT + LT A+ +
Sbjct: 291 GKMSKSSGEFLTVTLLMERGFNPLDYRYFALGSHYRNYLNFTWEALTGAKEAFKSLHKKT 350
Query: 340 ----------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
TS + A+ +DLN A+ ++ + + + + +
Sbjct: 351 DPLIGKATAITSEAAKAFQQEFKDAIGDDLNMPRALGIMNTMLKSDIDDGEKAALVADFD 410
Query: 390 HILGI-------EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
I G+ E K+ N NI IE L+ R K ++ +D IR +L + +
Sbjct: 411 KIFGLKLDQPREEYVKKGANDNIDTAKIEALIAARKEARANKNWAESDRIRDELAAMNIV 470
Query: 442 LEDYKNPDNGQRMTRWKQK 460
++D K T W K
Sbjct: 471 IKDSK------EGTTWSVK 483
>gi|317012690|gb|ADU83298.1| cysteinyl-tRNA synthetase [Helicobacter pylori Lithuania75]
Length = 465
Score = 322 bits (826), Expect = 7e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNFAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 SDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGNLGEINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|308063719|gb|ADO05606.1| cysteinyl-tRNA synthetase [Helicobacter pylori Sat464]
Length = 465
Score = 322 bits (825), Expect = 7e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S +R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADNIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|297621589|ref|YP_003709726.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
gi|297376890|gb|ADI38720.1| Cysteinyl-tRNA synthetase [Waddlia chondrophila WSU 86-1044]
Length = 484
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 152/484 (31%), Positives = 242/484 (50%), Gaps = 50/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K +NT+ R F+ I + + +Y CGPTVY+FAHIGN R + D+L R L+++ E
Sbjct: 15 LKFFNTITRSKDPFKPISGNRVSLYTCGPTVYNFAHIGNYRTYMFEDLLRRTLKFFGYE- 73
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N+TD+DDK I A ++ N ++ T + F +D L H P
Sbjct: 74 -VEQVMNLTDVDDKTIRGATEQ------NVSLDAYTKPFKEAFFEDIRTLNIEPAEHYPA 126
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
AT++I QMI +I+ ++ G AY A+ + + + YG S KIDE K
Sbjct: 127 ATDYIDQMIAMIEKLLEKGAAYRGADGSVYYAIETFKRYGCLSHLKIDELKSGASDRVAS 186
Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++Y K N ADF+LWK P G W+SP+G+GRPGWH+ECS M+ LG+ D+H GG
Sbjct: 187 DEYEKDNVADFVLWKSYDPERDGKIYWDSPFGKGRPGWHLECSTMAMQILGETIDLHCGG 246
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D +FPHHENEIAQS + +W+H+ L +E +KMSKS GNF T+ +LLE
Sbjct: 247 VDNMFPHHENEIAQSEACSG-QTFVKMWLHSEHLIIENKKMSKSLGNFFTLRDLLE---- 301
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL-- 355
+ + +R +L THY+ ++FT + L + L + +
Sbjct: 302 --KGYSGKQVRYILLQTHYKTQLNFTFEGLEAVKHSLQRLQDFVYRLQGVTGRETHHALD 359
Query: 356 --------------YNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
+DLN A+ +L++L R+ D +L +
Sbjct: 360 ALLDQALLGFANGLADDLNISVALASLYELVRDVNGLIDQGKLGEGDANRVLELLKRFNS 419
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + I+ L +R+ + K +S AD +R ++S+G+++ED+ +
Sbjct: 420 VLGVIDFEMKEESIPDDLIQAL-DDRIAARQNKDWSEADRLRDYIQSRGYVIEDFPSGSR 478
Query: 451 GQRM 454
+++
Sbjct: 479 LKKV 482
>gi|325844466|ref|ZP_08168193.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
gi|325489140|gb|EGC91524.1| cysteine--tRNA ligase [Turicibacter sp. HGF1]
Length = 446
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 165/467 (35%), Positives = 236/467 (50%), Gaps = 51/467 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNT R+ EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R +Y E
Sbjct: 1 MLIYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N+TD+DDKII RA +E + + I+ K F++ L L T P+
Sbjct: 60 -VEFVSNVTDVDDKIINRAIEEGVTE------AQISEKYLNYFLECNKVLNALPLTAMPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + MI I ++ AY + ++ F + YG S +KIDE ++G R+ E
Sbjct: 113 VTESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ T W+SPWG GRPGWH EC M ++ DIHGGG DL FPH
Sbjct: 173 KENPLDFVLWKK-TDKGITWDSPWGAGRPGWHTECVVMINNQFHGKIDIHGGGTDLQFPH 231
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C AN W+H G L L KMSKS GN I + +L+E A
Sbjct: 232 HENEIAQSLCMY-EHNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDA 283
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
RL ML HYR+PI++T + + A K T
Sbjct: 284 NAFRLFMLSVHYRQPINYTEENIQLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVPEI 343
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGI 394
+ + AL +D NT +AI +L+ +E K N L +I G
Sbjct: 344 EALMNQFVEALEDDFNTANAIASLYGAIKEINKMVRAKASDEANRYALMTLQNMTYIFGF 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++ K K ++ +L+Q K K F+ AD +R +L++ +
Sbjct: 404 DLNK----KRLTDEERELMQAWEEARKAKDFAKADELRGKLQALNVL 446
>gi|260435038|ref|ZP_05789008.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260412912|gb|EEX06208.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 493
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 166/529 (31%), Positives = 231/529 (43%), Gaps = 109/529 (20%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + P +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+N TDIDDKI++RA +E N +++ ++ +N F +D L L P
Sbjct: 61 E--VTFVQNFTDIDDKILKRAGEE------NSSMTEVSERNIASFHQDMDALGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
PRAT + + LI + G AY A ++ F YG S R + EQ+
Sbjct: 113 PRATQCLDGIRALIGELEAKGAAYSAEGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A + A +W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 233 DLVFPHHENEIAQSEAATG-QDLARVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------- 338
A +RL +L HYR+P+DFT + L A
Sbjct: 288 --GVSAMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALSLGDRHGESLGWSTAAP 345
Query: 339 -----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
T ++ +SA+ +DLN+ + L LA+ + L
Sbjct: 346 LTEGAMTADGGPADTPLVELEQRFISAMDDDLNSSGGLAVLFDLAKPLRALANRLERGED 405
Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ +LG+ E I+
Sbjct: 406 AALPEPELKCLERRWQLLRHLGAVLGLRSEAEAATSLDDGTIDA---------------- 449
Query: 428 A-----------------DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L ++G L D +T W +
Sbjct: 450 -AIAARKAAKAAKEYAEADRIRDELAAQGVELIDKPGG-----VTEWIR 492
>gi|325283376|ref|YP_004255917.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
gi|324315185|gb|ADY26300.1| cysteinyl-tRNA synthetase [Deinococcus proteolyticus MRP]
Length = 489
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 169/503 (33%), Positives = 240/503 (47%), Gaps = 70/503 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +Y+T++R+ F+ P ++ MY+CGPTVY AH+G+A+ + FDV+ R ++
Sbjct: 10 NIHLYDTMQRQKVRFEPSTPGHVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTFLHFGY- 68
Query: 64 KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V YV NITD+ +DK++ RAR E + K F KD
Sbjct: 69 -KVRYVANITDVGHLQNDSDDGEDKMLARARLEQLE------PMEVADKYFWSFFKDMDA 121
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
L L P+ PRAT HI + I LI+ +I GHAYE+N + FD S P YG S RK+D+Q
Sbjct: 122 LNVLRPSINPRATGHIQEQIKLIEELIEKGHAYESNGSVYFDVRSWPEYGKLSGRKLDDQ 181
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ GTR + K++P DF LWK + P W+SPWG G PGWHIECSAMS YLG+ FD
Sbjct: 182 EEGTREAVREEKRDPRDFALWKNAEPEHIMRWDSPWGVGFPGWHIECSAMSLKYLGEGFD 241
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHE EIAQ+ A A W+HN L + G KMSKS GNF TI ++L
Sbjct: 242 IHGGGLDLQFPHHEAEIAQAEAAGHH--FARYWMHNNMLTIGGEKMSKSKGNFTTIQDIL 299
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------ 340
+ + V+R ++ +HYR + + A + T
Sbjct: 300 -------QRYDPMVVRFLLVSSHYRSVTEMNDEAFASAANGYRRLVDTLAEIERRLNDAP 352
Query: 341 -------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA---- 389
A+ +D NT A+ AL+ L E + + +
Sbjct: 353 AGADAALDAKIAARVQEFEDAMRDDFNTPKAVAALYGLTTEMNTALNAGAVGRETLEQAR 412
Query: 390 --------HILGIEVCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSADYIRKQLE 436
+LG+ +E +++ R K+++ AD +R L
Sbjct: 413 NAYRTLGGDVLGLFAGNGQAATQDDAPVVDRLMEIVLKARQNYRLQKQYAEADELRDTLG 472
Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
+ G +ED K+ RWK+
Sbjct: 473 AVGITVEDTKDGA------RWKR 489
>gi|261838269|gb|ACX98035.1| cysteinyl-tRNA synthetase [Helicobacter pylori 51]
Length = 465
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 151/487 (31%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 E------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ + IE ++ER + K F AD+IR++L + L D
Sbjct: 403 PVEYFQLGVSGSEKQEIENKIEERKRAKEQKDFLKADHIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|317014292|gb|ADU81728.1| cysteinyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
Length = 465
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 149/487 (30%), Positives = 237/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLIHNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I +++ + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSNIYIESYTRDLNALNVKQPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++
Sbjct: 113 ASEYLDAMVSMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 TDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ +++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PNAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|311106733|ref|YP_003979586.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
gi|310761422|gb|ADP16871.1| cysteinyl-tRNA synthetase 1 [Achromobacter xylosoxidans A8]
Length = 467
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 152/475 (32%), Positives = 222/475 (46%), Gaps = 36/475 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + F I ++ MY CGPTVYD AHIGN R + D+L R+L
Sbjct: 1 MPLALYDTWSRTVRSFTPIHAGHVGMYCCGPTVYDHAHIGNLRTYVFEDILRRVLIRNGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
E V +V NITD+ +DK+ + +R+ ++ I + T+ FV D
Sbjct: 61 E--VRHVVNITDVGHLTSDADEGEDKMEKGSRRTG------ESAYAIAQRYTEAFVADWQ 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L PT RAT+HI + I I + G+ Y N+ + FDTS +YG +R
Sbjct: 113 ALNLLEPTVWCRATDHIAEQIAFIGQLDRSGYVYRTNDGLYFDTSKQDDYGFLARLDRAG 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV K+N DF LWK S + W+SPWGRG PGWHIECSAMS+ +LG
Sbjct: 173 LQAGKRVALG-AKQNITDFALWKFSPEGVVRQMEWDSPWGRGFPGWHIECSAMSAKHLGI 231
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG D I HH NEIAQ+ A + AN WIH FL L +
Sbjct: 232 WFDIHCGGEDHIAVHHSNEIAQTQAAHGT-RLANFWIHGHFLTLNADSKMSKSS-----G 285
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK---WPQTSTSKGI 346
+ + + R+ R + HYR + F+ L A+ L++ G
Sbjct: 286 DFVRLQTLRSRNIDPLAYRYLCMTAHYRSKLHFSWASLGAAQTALNRLRHLYSGWPDGGR 345
Query: 347 IDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH-L 401
IDP + +DLN A+ L +L + L ++ +LG+ + + +
Sbjct: 346 IDPDFAARFNAELNDDLNLPRALAVLWELVKSELPPATLKATVDSFDFVLGLGLRDWNPV 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+I +I L+ ER + K + AD IRK L ++G+ +ED + +
Sbjct: 406 ASDIPESIRVLLGERAQAREAKNWVKADEIRKMLNTRGWRVEDGNDGQRLTEIAT 460
>gi|293375371|ref|ZP_06621652.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
gi|292645924|gb|EFF63953.1| cysteine--tRNA ligase [Turicibacter sanguinis PC909]
Length = 446
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 165/467 (35%), Positives = 237/467 (50%), Gaps = 51/467 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNT R+ EF+ I+ + +RMY+CGPTVY++ HIGNARP++ FD+++R +Y E
Sbjct: 1 MLIYNTYTREKEEFRPIEENKVRMYICGPTVYNYIHIGNARPVLFFDLVHRYFKYLGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N+TD+DDKII RA +E + + I+ K F++ L L T P+
Sbjct: 60 -VEFVSNVTDVDDKIINRAIEEGVTE------AQISEKYLNYFLECNKALNALPLTAMPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + MI I ++ AY + ++ F + YG S +KIDE ++G R+ E
Sbjct: 113 VTESMDSMIEFINQLVERDFAYAVDGDVYFRIDKVREYGQLSGKKIDELEVGARIAEDSK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ T W+SPWG GRPGWH EC M ++ DIHGGG DL FPH
Sbjct: 173 KENPLDFVLWKK-TDKGITWDSPWGAGRPGWHTECVVMINNQFHGKIDIHGGGTDLQFPH 231
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS C AN W+H G L L KMSKS GN I + +L+E A
Sbjct: 232 HENEIAQSLCMY-EHNIANYWMHVGRLGLNNEKMSKSIGNVINVKDLIE-------QIDA 283
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------- 344
RL ML HYR+PI++T + + A K T
Sbjct: 284 NAFRLFMLSVHYRQPINYTEENIQLAVKEWQKVKSTYDQLHLKLDLAGALDVEPSVVPEI 343
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------NHDLLPIFNASAHILGI 394
+ + AL +D NT +AI +L+ + +E K N L +I G
Sbjct: 344 EALMNQFVEALEDDFNTANAIASLYGVIKEINKMVRAKASDEANRYALMTLQNMTYIFGF 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++ K K ++ +L+Q K K F+ AD +R +L++ +
Sbjct: 404 DLNK----KRLTDEERELMQAWEEARKAKDFAKADELRGKLQALNVL 446
>gi|322688493|ref|YP_004208227.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
157F]
gi|320459829|dbj|BAJ70449.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
157F]
Length = 549
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 152/542 (28%), Positives = 224/542 (41%), Gaps = 109/542 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+ +A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILVKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 202
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVPAVSADDLPADFVAAMNDDVNVSGATAAIFTAIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADGTAE 493
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + I + + R K K F+ AD IR L G +ED G + + W
Sbjct: 494 SPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWS 547
Query: 459 QK 460
K
Sbjct: 548 LK 549
>gi|223982635|ref|ZP_03632869.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
12042]
gi|223965415|gb|EEF69693.1| hypothetical protein HOLDEFILI_00143 [Holdemania filiformis DSM
12042]
Length = 478
Score = 322 bits (825), Expect = 8e-86, Method: Composition-based stats.
Identities = 158/463 (34%), Positives = 234/463 (50%), Gaps = 47/463 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++YNTL KI EF+ + P+ + MYVCGPTVY+ AHIGNARP+IVFD L RL
Sbjct: 35 MSIRLYNTLSGKIEEFKPMKPNEVSMYVCGPTVYNHAHIGNARPIIVFDTLRRLFEAQGY 94
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV N TD+DDKII++A +E N A +++++ + + K L
Sbjct: 95 --TVKYVSNYTDVDDKIIKKAHEE------NVAEGVVSARYIEAYQKVRDSLNTEPLFAT 146
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T + ++I+ I ++ GHAY+ ++ F S+P+YGSFS++ +++ ++G R+ E
Sbjct: 147 PRVTETMDEIIHFIDELVKTGHAYQVGGDVYFRVGSVPSYGSFSKQNLEDLQVGARIEEN 206
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF LWK T M W+SPWG GRPGWH EC M G DIHGGG+DL F
Sbjct: 207 TKKENPLDFALWK-ETDMGIKWQSPWGEGRPGWHTECVVMIHKEFGDQIDIHGGGMDLRF 265
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A+ W+HN +N+ G KMSKS GN +++E
Sbjct: 266 PHHENEVAQSQALFHN-SIAHYWLHNAMININGEKMSKSLGNVSWAKDVIE-------KL 317
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------SKGII 347
A ++R ML HYR ++F+ + + A L K
Sbjct: 318 GADLVRWLMLSVHYRGELNFSDETIETARKELDKVRTPMKQAYIKSQLANVTVTGCDEDA 377
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEV 396
+ A+ +DLNT + +++ ++ + I +LGI +
Sbjct: 378 VKRFIDAMNDDLNTPNGYAEIYETVKKLNQALRQREIQWDQVGAEVGALEKMLEVLGIRL 437
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
K L+++ +++ E K F+ AD R L +G
Sbjct: 438 PKVTLSEDD----KQVFAEWNAAKAAKDFAQADVKRAILIERG 476
>gi|322437023|ref|YP_004219235.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
gi|321164750|gb|ADW70455.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
Length = 492
Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 171/513 (33%), Positives = 236/513 (46%), Gaps = 76/513 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL ++ D + +RMY CGPTVYD+ HIGN R I DVL R L+
Sbjct: 1 MALELFNTLGGRVESLTPADGAVLRMYACGPTVYDYGHIGNFRTFIHVDVLRRYLKQTGI 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +V NITD+DDKII A + I T K F +D L P
Sbjct: 61 E--VKHVMNITDVDDKIIRNAA------LLKMPIEDYTRKYEDAFFEDMAALGVERPEVL 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT +I +M+ LI+ + AY+ + F + +YG S++ + + G RV
Sbjct: 113 PRATENIEEMVALIERLAEKDIAYQAEDGSWYFRIARFADYGKLSKKDFEGIEDGARVDV 172
Query: 182 KYHKKN-PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++K+ DF LWK P E WE+ G GRPGWHIECSAM++ +LG FD+H GG DL
Sbjct: 173 DEYEKDAARDFALWKAVKPGEHAWETRLGPGRPGWHIECSAMATKFLGDGFDLHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A A W+H FL +EGRKMSKS GNF T+ +LL +
Sbjct: 233 TFPHHENEIAQSESASGTA-FARHWMHVRFLLVEGRKMSKSEGNFYTLRDLL------LK 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--STSKGIIDPAVLSAL--- 355
A IR ++ YR ++FT L E+ + + KG + L
Sbjct: 286 GHRASAIRFLLMSVPYRHQLNFTFDGLIESTNAVERLRTFADRMRKGSFPEGLNEDLAAA 345
Query: 356 ------------YNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
NDLNT A A+ L R D +L + +
Sbjct: 346 TAKALAGYDAALSNDLNTAEARAAIFDLVRAGNSAADAGTVKSGNAAEILKVLERFDGVF 405
Query: 393 GIEVCK---------EHLNKN----------------ISIAIEKLVQERLILLKMKKFSS 427
+ V + + K+ I+ LV ER K + F+
Sbjct: 406 AVLVDRDAEITRAALDWAEKDGRMDEAAPELVATLSFSDADIDALVAERTHAKKTRNFAR 465
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD +R +L +KG +LED K+ RWK+K
Sbjct: 466 ADAVRNELLAKGILLEDTKD------GVRWKRK 492
>gi|157736506|ref|YP_001489189.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
gi|187629788|sp|A8ERE6|SYC_ARCB4 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157698360|gb|ABV66520.1| cysteinyl-tRNA synthetase [Arcobacter butzleri RM4018]
Length = 467
Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 158/483 (32%), Positives = 249/483 (51%), Gaps = 48/483 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I+++++++ EF+ I +++YVCGPTVYD +H+G+AR I FD+L+R+L+
Sbjct: 1 MNTLHIFDSVKKEKVEFKPIQEGKVKIYVCGPTVYDDSHLGHARSAIAFDLLHRVLKVND 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT +N TDIDDKII++ + N + IT++ + D L L T
Sbjct: 61 YE--VTMTKNFTDIDDKIIKKMYE------TNKTLENITNQYINAYKADMKALNILDNTI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+P+AT ++ M +I N+I AY+ ++ + FDTS YG+ S + +++ RV E
Sbjct: 113 EPKATENLEVMKEMISNLISKDVAYKTSDSVYFDTSKDNLYGTLSHKS-NDENSQARVEE 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-----GKVFDIHGG 236
K+N ADF LWK + +++P+G+GRPGWHIECSAM +L DIH G
Sbjct: 172 NQEKRNSADFALWKFEKANDVSFDAPFGKGRPGWHIECSAMIEKHLAYKDSPYQIDIHAG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENE AQ+ C+ + A W+HNGF+N+ G KMSKS GN + ++L
Sbjct: 232 GADLLFPHHENEAAQTRCSSG-QNLAKYWMHNGFVNINGEKMSKSLGNSFFLKDVL---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGII 347
+S+ VIR ++ THYR + F + L ++ L K +
Sbjct: 287 ---KSYSGEVIRFYLMSTHYRADLSFNEEDLIASKKRLDKIYRLKKRVYGIEDSSVNKKF 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE- 395
+L+AL +D+NT A+ + ++ + D L+ N +LGI
Sbjct: 344 KEDILNALNDDINTSIALSVIDEMINSANDKLDSNPKDKNLKKELISNINFIEEVLGIGG 403
Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ +N++ IE L+ +R K K F +AD +R +L S L D N
Sbjct: 404 NDAYAYFQFGINESTKEKIESLILKRNEAKKTKDFQTADKLRDELSSMDISLMDTVNGTV 463
Query: 451 GQR 453
++
Sbjct: 464 WEK 466
>gi|261839681|gb|ACX99446.1| cysteinyl-tRNA synthetase [Helicobacter pylori 52]
Length = 465
Score = 322 bits (824), Expect = 9e-86, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 231/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S +R+
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 ADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALRGEILANLKFIEELLGIGFKN 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L L D
Sbjct: 403 PSTYFQLGVSESEKQEIESKIEERKRAKEQKDFLKADSIREELLKHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|46190761|ref|ZP_00121063.2| COG0215: Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|189439911|ref|YP_001954992.1| cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|227545810|ref|ZP_03975859.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|312133327|ref|YP_004000666.1| cyss [Bifidobacterium longum subsp. longum BBMN68]
gi|317482007|ref|ZP_07941032.1| tRNA synthetase class I catalytic domain-containing protein
[Bifidobacterium sp. 12_1_47BFAA]
gi|322690503|ref|YP_004220073.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
1217]
gi|189428346|gb|ACD98494.1| Cysteinyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|227213926|gb|EEI81765.1| cysteine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|291517397|emb|CBK71013.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
gi|311772544|gb|ADQ02032.1| CysS [Bifidobacterium longum subsp. longum BBMN68]
gi|316916574|gb|EFV37971.1| tRNA synthetase class I catalytic domain-containing protein
[Bifidobacterium sp. 12_1_47BFAA]
gi|320455359|dbj|BAJ65981.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM
1217]
Length = 549
Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats.
Identities = 152/542 (28%), Positives = 224/542 (41%), Gaps = 109/542 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+ +A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILVKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 202
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVTAVSADDLPADFVAAMNDDVNVSGATAAIFTAIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGAAGGAADGTAE 493
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + I + + R K K F+ AD IR L G +ED G + + W
Sbjct: 494 SPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTWS 547
Query: 459 QK 460
K
Sbjct: 548 LK 549
>gi|149175961|ref|ZP_01854578.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
gi|148845115|gb|EDL59461.1| cysteinyl-tRNA synthetase [Planctomyces maris DSM 8797]
Length = 518
Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats.
Identities = 157/527 (29%), Positives = 230/527 (43%), Gaps = 84/527 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL RK +FQ I P + +Y+CGPTVY +HIG+ ++ D + R L Y
Sbjct: 1 MTLRIYNTLSRKKEDFQTIKPGKVGIYLCGPTVYKHSHIGHMVGPVIIDTIARYLTYNNY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V NITDIDDK+I +A + +N ++ + + TQ + + + T
Sbjct: 61 D--VKFVNNITDIDDKLINKAAE------LNISVEKLAADMTQDYFDNLETMGVDTITDF 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT++I M +IQ++I AY + ++ F ++ YG S RKI+E GTRV
Sbjct: 113 PKATDYIEAMQEIIQSLIDKDFAYPLDGDVYFSAAADNKYGCLSGRKIEEMIAGTRVEAN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNPADF LWK+S P EP W+SPWG GRPGWHIECSAMS LG FDIHGGGLDL+F
Sbjct: 173 DKKKNPADFALWKKSRPGEPAWDSPWGPGRPGWHIECSAMSRKLLGDSFDIHGGGLDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS- 301
PHHENE AQS C + W+HNG + + + ++ +
Sbjct: 233 PHHENERAQSECCTG-KTYVRYWVHNGLMQASDAAGKVGGQHDRHGDVAVDQQAQEADKL 291
Query: 302 ---------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------ 340
P ++RL +L THYR PI F+ + + E + + +
Sbjct: 292 SGSKGAASVKELFAVHPPEIVRLFLLSTHYRSPIAFSDENIRETGKGIEGFYRFFETFER 351
Query: 341 ----------------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ L A+ +D NT AI L +L
Sbjct: 352 ITGESFYQLPTADKREQSTGLEGDPAEYFQQVSELRQRFLEAMDDDFNTGGAIGVLFELR 411
Query: 373 REST--------------------KNHDLLPIFNASAHILGIEVCKEHLNKNISIA---- 408
+++LG+ + N
Sbjct: 412 STLNALIHSQNLEGEGKQNQTMVEALKTGASQLKELSNLLGVFRKAPAKDANADDDLVNQ 471
Query: 409 -IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+E ++ R K + AD IR+ L + +ED +R
Sbjct: 472 LMELVLDIRKDARANKNWDIADKIREGLAACQITVEDRPEGSLWRRG 518
>gi|86157699|ref|YP_464484.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|109894880|sp|Q2IQG7|SYC_ANADE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|85774210|gb|ABC81047.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 481
Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats.
Identities = 174/502 (34%), Positives = 249/502 (49%), Gaps = 65/502 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++TL + E ++P +R+YVCGPTVYD++H+G+AR +V+DV+ R LR
Sbjct: 1 MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN TD+DDKII+RA + + + S+ F +D L L P +
Sbjct: 61 E--VRFVRNFTDVDDKIIQRANERG------EDPIALASRFADAFHEDMDALGNLRPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HIP+++ LI ++ G AY N ++ + P YG S+R +D+ G RV
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP W+SPWG+GRPGWHIECSAM+ +LG D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWDSPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232
Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
FPHH NEIAQS A E A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ +R +L THYR +F+ Q L EAE LS +T
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGVEPGAEP 345
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
+AL +D NT + + + E+ D L F A
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSPEEKARLAAFARGARAVGA 405
Query: 391 ILGIE------------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LGI +E+L+ ER K F+ +D IR L ++
Sbjct: 406 VLGILGRPPAQALSAIRDRAAARRGIDGSEVERLIAERAAARAAKDFARSDAIRDGLLAR 465
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G +L D G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481
>gi|108764055|ref|YP_630849.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108467935|gb|ABF93120.1| cysteinyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 504
Score = 322 bits (824), Expect = 1e-85, Method: Composition-based stats.
Identities = 174/516 (33%), Positives = 242/516 (46%), Gaps = 90/516 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++NT+ + Q P + +YVCGPTVY + HIGNAR FDV+ R LR+
Sbjct: 19 PAIRLFNTMTMQKELLQPAIPGEVGVYVCGPTVYSYIHIGNARTFTSFDVVVRYLRHRG- 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRN TD+DDKII+ A + +A + ++ + F +DT L L P
Sbjct: 78 -LKVRYVRNFTDVDDKIIKAAAETG------EAPVELAARYVEIFREDTRALHLLEPDFS 130
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++H+P++I +IQ ++ GHAY + ++ F SS +Y S+R +DE +G RV
Sbjct: 131 PRVSDHLPEIIAIIQKLVDKGHAYASQGDVYFSVSSDEDYAKLSKRNLDELCVGERVQPG 190
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+ P DF LWK + P EP WESPWG GRPGWHIECSAMS+ YLG+ FDIHGG LDLIF
Sbjct: 191 EQKREPLDFALWKAAKPGEPAWESPWGPGRPGWHIECSAMSAKYLGETFDIHGGALDLIF 250
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A+ + A W+H GFL+LEG KMSKS GN + + + L
Sbjct: 251 PHHENEIAQSESANGV-TFARYWMHCGFLDLEGAKMSKSLGNVVRLRDALT-------KV 302
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
+R L THYR P+ F+ + L +AE + + +T
Sbjct: 303 DPEALRFFFLATHYRHPLSFSDKALADAETRMEYFYETLRKVDERISGKDFGKGPLHGDP 362
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFNAS 388
SA+ +D NT + +L L + D L
Sbjct: 363 QRFFTEFESAMDDDFNTAGGLGSLSGLFGMMNELTDKPPVKDKALVGRTLHALREDVRRV 422
Query: 389 AHILGIEVCKEHL------------NKNISIAIEKLVQERL-----------ILLKMKKF 425
+ +LG+ +E+L+ ER
Sbjct: 423 SSVLGLFEDAPDAWLLRRRERAVRERGIDVAEVERLLGERTAARAAKDFAAAD------- 475
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
+R +L+ KG + D T WK P
Sbjct: 476 ----RVRSELKEKGVEIMDT------PAGTTWKVAP 501
>gi|219851792|ref|YP_002466224.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
gi|219546051|gb|ACL16501.1| cysteinyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
Length = 419
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 160/446 (35%), Positives = 241/446 (54%), Gaps = 32/446 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+TL R + ++P+ + M+VCGPTVYD++H+G+AR +VFDVL + LR+ K
Sbjct: 1 MELYSTLLRTVEPLVTLNPNRVSMFVCGPTVYDYSHLGHARTYVVFDVLAKYLRWTG--K 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII RA E N + ++ + ++++D L + ++ R
Sbjct: 59 EVFYLQNITDVDDKIINRANAE------NVSQHDLSRRFEIEYLRDMRALGVDSVSYYAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HIP++I ++ +I G AY + F+ + + G S + ++
Sbjct: 113 ATTHIPEIINQVERLISRGAAYVTEGGVYFNVGTFEHNGELSHQHGTDRVSRIT---DET 169
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N DF LWK E W+SPWGRGRPGWHIE +A+S Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KQNSLDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDIHGGGLDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ + W+H GFL ++G KMSKS GNFITI + L ++W
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDAL-------KTWNK 282
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS----ALYNDLN 360
V+R +L++HY P+ T + L A L + +P A+ +DLN
Sbjct: 283 DVLRYFILLSHYSSPLQATDEGLDNAARALEHIRAVAQKDTGENPEGRKAFTDAMESDLN 342
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
T +A+ A+ LA + D+L ILGI +E S + L + R L
Sbjct: 343 TPNALAAIQTLA----ASGDILA-LKEFGEILGINFLRET-----SAPLSILQEIRAELR 392
Query: 421 KMKKFSSADYIRKQLESKGFILEDYK 446
K+F+ AD IR+++ + G + D
Sbjct: 393 ANKQFAVADMIRERMVAAGITITDAP 418
>gi|109947774|ref|YP_665002.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
gi|123362573|sp|Q17WH3|SYC_HELAH RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|109714995|emb|CAK00003.1| cysS [Helicobacter acinonychis str. Sheeba]
Length = 465
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 156/487 (32%), Positives = 239/487 (49%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + P +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MLIYDTKLKQKVPFEPLAPKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+DL+FPHHENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L
Sbjct: 231 VDLLFPHHENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIID----P 349
+++ ++R +L HYR ++F + L ++ L K + G ID
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L + +DLN A+ L + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKN 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + + ++ IEK ++ER + K F AD IR++L + L D
Sbjct: 403 PTEYFQLGVKESEKQEIEKKIEERKRAKEQKDFIKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTTWEK 463
>gi|161528475|ref|YP_001582301.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
gi|160339776|gb|ABX12863.1| cysteinyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
Length = 462
Score = 321 bits (823), Expect = 1e-85, Method: Composition-based stats.
Identities = 173/482 (35%), Positives = 248/482 (51%), Gaps = 53/482 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ +TL E +++Y+CG TVYD +HIG+AR +IVFDVL R L E
Sbjct: 1 MKLQDTLSNAEQELD--TSKKVKIYLCGVTVYDESHIGHARTIIVFDVLRRYLEDKGIEI 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+++N TD+DDKII RA+ E N + I++K + + KD L T+ P+
Sbjct: 59 E--FIQNFTDVDDKIINRAQAE------NTSAEAISTKYIENYFKDFDGLNVKHATNYPK 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI +I I+ +I AY + N + F S P YG S++KIDE + G R+
Sbjct: 111 ATEHIEDIIKFIEKLIEKEIAYVSKNGVYFAVSKFPEYGKLSKKKIDELESGARIEVDEA 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DF +WK + +EP W+SPWG+GRPGWHIECSAMS+ YLG+ FDIHGGG DLIFPH
Sbjct: 171 KNNPLDFAVWK-FSDVEPLWDSPWGKGRPGWHIECSAMSTKYLGENFDIHGGGRDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + A IW+H G + ++G KMSKS GN +I +LE +W
Sbjct: 230 HENEIAQSESFTGNQ-FAKIWMHVGMVTIDGEKMSKSIGNIKSIKHVLE-------NWGP 281
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------GIIDP 349
+IRL L HY +PID++ + L E + +
Sbjct: 282 NIIRLFCLSGHYSKPIDYSEELLKENLTKWRQAETCYYELIHANSENSEKVGSIVEKLGS 341
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
AL +D+NT A+ A +L +E+ + + F ILG+ +
Sbjct: 342 EFDKALEDDVNTHLALSAFFQLVKEANRLAAEEKLGKEDAKIIKTEFLRMLKILGLNI-- 399
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + + I+ +++ R + K+F AD IR +L L D+K T W
Sbjct: 400 PEMTEGMKQEIDTMIENREKFRQEKQFQEADQIRDKLNEMNIELIDHKGK------TIWM 453
Query: 459 QK 460
+K
Sbjct: 454 KK 455
>gi|193084115|gb|ACF09782.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
KM3-153-F8]
Length = 469
Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats.
Identities = 156/481 (32%), Positives = 219/481 (45%), Gaps = 46/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K +NTL RK F+ N+ +Y CGPTVYD+AHIGN R + D+L R L Y
Sbjct: 3 SLKFFNTLGRKKESFKHDKNKNVLIYCCGPTVYDYAHIGNFRTFLFEDILIRYLEYKGY- 61
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ +V NITDIDDK I+ + + N + T K F +D +L P
Sbjct: 62 -KIKFVMNITDIDDKTIKASSEN------NVPLKEYTKKYEDAFFEDIKKLRIRKAESYP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI ++ I+ + AYE+N I F S YG+ S K +
Sbjct: 115 RATEHIDNIVTHIKKLKELEFAYESNGSIYFSISKFKKYGTLSGEKNKNINNKKPINSDE 174
Query: 184 H-KKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K DF LWK W++ G+GRPGWHIECS MS+ L DIH GG+DL
Sbjct: 175 YSKNEIQDFALWKAWVQDDNNVFWDNELGKGRPGWHIECSVMSTKLLNDSIDIHAGGVDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQ+ + W+H L +EG+KMSKS GNF T+ +LL+
Sbjct: 235 IFPHHENEIAQAEALTNNK-FVRYWLHAEHLIVEGKKMSKSEGNFFTLRDLLK------E 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----------------TS 343
+ IRL ++ +HYR ++FT+ L +A + + +
Sbjct: 288 GYEPLTIRLLLISSHYRSQLNFTINGLKQASENIKRLQEIYTKVKLSKTKNGYDEELFKH 347
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
A+ +D N A+ + R K D +L F IL
Sbjct: 348 TKTSKEKFERAMDDDFNMPVALSVIFNYVRIINKYIDNTELTEMNKQEILDFFVKIDQIL 407
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ KE IE+L++ R + K + AD IRK+L GFI+ED N +
Sbjct: 408 DVVNTKEKDQIFPEPRIEELIRRRNEARERKDWKKADEIRKELLKSGFIIEDTSNGSIIK 467
Query: 453 R 453
+
Sbjct: 468 K 468
>gi|124514778|gb|EAY56290.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum rubarum]
Length = 490
Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats.
Identities = 174/473 (36%), Positives = 237/473 (50%), Gaps = 43/473 (9%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
NTL +K P + MYVCG TVYD H+G+AR VFD+L+RLL V Y
Sbjct: 21 NTLTQKTEPLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLHRLLLRLGY--RVRY 78
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
VRNITDIDDKII +A++ I+ IT F +D RL L P +PRAT +
Sbjct: 79 VRNITDIDDKIIRKAQETG------RTITEITDIYIDSFQRDMGRLGVLPPNKEPRATLY 132
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ MI LI ++ G AY+ N++ F +YG S +K+DE + G R+ K++P
Sbjct: 133 LEPMIRLIGTLLDKGFAYKKGNDVYFRVRKYQSYGELSHQKLDELQAGARIVADEEKEDP 192
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK + EP + + +G GRPGWHIECSAMS LG+ DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKIGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
AQS CA ++ IWIHNGF+ L KMSKS GN I ET F +R
Sbjct: 253 RAQSECATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPF-PEGVTREWLR 310
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSALYNDL 359
+L THY P+D T + L A+ L +G + LSAL D+
Sbjct: 311 AFLLSTHYGSPVDLTDENLAHAKNALDSLYLFKDRLDSVLGEVREGQMTREFLSALCRDM 370
Query: 360 NTVSAIQALHKLAREST------------KNHDLLPIFNASAHILGIEVCKEH------- 400
+T A + LH+ + D+ +F + LGI
Sbjct: 371 DTPVAFRVLHEAKNSLNPVLGSGGSLKEERLSDVRALFEVAKSTLGILTLPASEWVYGKG 430
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +++LV ER + K ++ AD IR++L+ G++LED
Sbjct: 431 EKTGREESLLPEEVDRLVLEREKARREKDYARADGIRERLKKAGYLLEDNPGG 483
>gi|110289208|gb|AAP54161.2| tRNA synthetase class I family protein, putative, expressed [Oryza
sativa Japonica Group]
Length = 491
Score = 321 bits (823), Expect = 2e-85, Method: Composition-based stats.
Identities = 160/488 (32%), Positives = 240/488 (49%), Gaps = 60/488 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + F+ + MYVCG T YD++H+G+AR + FDVL+R L+Y E
Sbjct: 21 ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGYE 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRN TDIDDKII+RA + + ++S+ +F +D L CL PTH+P
Sbjct: 81 --VNYVRNFTDIDDKIIKRANEAG------EDALSLSSRFIDEFHRDMYELQCLPPTHEP 132
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T HI Q+I LI I+ +G AY ++ F + P+Y S S RK+D+ + GTRV
Sbjct: 133 RVTKHIEQIIDLITKIMDNGKAYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDA 192
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NPADF LWK + EP WESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFP
Sbjct: 193 RKRNPADFALWKSAKEGEPSWESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFP 252
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS A + +++ R +S+ N +
Sbjct: 253 HHENELAQSQAAYPESEIISLYHPMALRLFLMRTHYRSDVN---------HSDTALQFAS 303
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ + + E + + E I L + +DL+T +
Sbjct: 304 GRLYYIYQTLHDGEETVSLYGEHKLENSIPA----DDQKLIEENRSNFLEKMSDDLHTTA 359
Query: 364 AIQALHKLAREST----------------KNHDLLPIFNAS-------AHILGI----EV 396
A+ L KL ++ K D + A ILG+ +
Sbjct: 360 ALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPMSSL 419
Query: 397 CKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
++ +K + + +++++++R + K K F+ +D IR +L + G L
Sbjct: 420 AEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALM------G 473
Query: 451 GQRMTRWK 458
T W+
Sbjct: 474 EPTGTLWR 481
>gi|296082122|emb|CBI21127.3| unnamed protein product [Vitis vinifera]
Length = 474
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 174/482 (36%), Positives = 246/482 (51%), Gaps = 73/482 (15%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG T YD +HIG+AR + FDVLYR LR+ E V YVRN TD+DDKII RA +
Sbjct: 1 MYVCGVTAYDLSHIGHARVYVSFDVLYRYLRHL--EYEVNYVRNFTDVDDKIIARANE-- 56
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + ++ + Q+F D T L CL P+ +P ++H+PQ+I +I+ II + AY
Sbjct: 57 ----MGEDPINLSRRYCQEFHVDMTYLHCLPPSVEPCVSDHMPQIIDMIKQIIDNDCAYR 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
++ F P YG S RK+++ + G RV KKNPADF LWK + EP W+SP
Sbjct: 113 VEGDVYFSVDKFPEYGRLSGRKVEDNRAGERVAVDSRKKNPADFALWKAAKKGEPFWDSP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG GRPGWHIECSAMS+ YLG FDIHGGG+DL+FPHHENEIAQSC A + + + WIH
Sbjct: 173 WGPGRPGWHIECSAMSAAYLGYSFDIHGGGMDLVFPHHENEIAQSCAACK-QSNISYWIH 231
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NGF+ ++ KMSKS GNF TI ++++ + +RL ++ THYR PI+++ +L
Sbjct: 232 NGFVTIDSEKMSKSLGNFFTIRQVIDI-------YHPLALRLFLIGTHYRSPINYSDVQL 284
Query: 328 TEAEILLSKWPQTST-----------------------SKGIIDPAVLSALYNDLNTVSA 364
A + QT L+++ +DL+T
Sbjct: 285 ESASDRVFYIYQTLHDCQNAMDQDDMTKKDSVPPHILDCINKFYNDFLTSMSDDLHTPVV 344
Query: 365 IQALHKLAREST----------------KNHDLLPIFNASAHILG---------IEVCKE 399
+ AL + L + ILG + +E
Sbjct: 345 LAALSDPLKTINDLLHTRKGKKQELRLESLAALEKVIRDVLTILGLMPASYSEALLQLRE 404
Query: 400 HL---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+K I + ++ER + K K++ +D IRK L + G L D + T
Sbjct: 405 KALKRSKLTEDHILQKIEERTMARKNKEYEKSDAIRKDLAAVGIALMDSPD------GTT 458
Query: 457 WK 458
W+
Sbjct: 459 WR 460
>gi|133909679|emb|CAL99791.1| Cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 452
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 156/465 (33%), Positives = 223/465 (47%), Gaps = 46/465 (9%)
Query: 16 TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
EF +YVCG TV HIG+ R + +DVL R L + + V VRN+TDI
Sbjct: 2 REFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGYD--VRLVRNVTDI 59
Query: 76 DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
DDKI+ +A + + + F RL CL P+ PRAT HI QMI L
Sbjct: 60 DDKILTKAADAG------RPWWEWATAHERAFESAFDRLGCLPPSALPRATGHITQMIEL 113
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+Q +I GHAY A ++ F +S + + + ++ K++P DF LWK
Sbjct: 114 MQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLD-EVQQGESTASGKRDPRDFTLWK 172
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ P EP W +PWG GRPGWH+ECSAMS++YLG FDIHGGGLDL+FPHHENE+AQS A
Sbjct: 173 AAKPGEPSWPTPWGDGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQSTAA 232
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
A W+HN ++ + G KMSKS GN + I +L+ AP IR ++ H
Sbjct: 233 GDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRAA-------APEIRYYLVAPH 283
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAIQ 366
YR I+++ L EA + G + +A+ +DL+T AI
Sbjct: 284 YRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQAIA 343
Query: 367 ALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK----------NISI 407
+H RES D ILG++ E +S
Sbjct: 344 VVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHALSE 403
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++Q+R + F++AD +R +L++ G +ED +
Sbjct: 404 LVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 448
>gi|239622493|ref|ZP_04665524.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
CCUG 52486]
gi|239514490|gb|EEQ54357.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
CCUG 52486]
Length = 536
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 153/543 (28%), Positives = 226/543 (41%), Gaps = 110/543 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 17 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT +PR
Sbjct: 75 KVTFVRNVTDIDDKILDKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 128
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 129 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 188
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 189 AAVADRMGPSVDATGADKYNPVDPADVSPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 248
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+C A +A W+H+ ++
Sbjct: 249 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHSAWV 306
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 307 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 359
Query: 332 ILLSKWPQTSTSKG-------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ G + ++A+ +D+N A A+
Sbjct: 360 AAYDRVSNFIERAGVALGDLKPNRDEITAVPADDLPADFVAAMNDDVNVSGATAAIFTAI 419
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHL-------------- 401
R L A LG++ E
Sbjct: 420 RSGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAADGTA 479
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ + I + + R K K F+ AD IR L G +ED G + + W
Sbjct: 480 ESPEHAALEALIAEQLNARAEARKAKDFAKADQIRDALTEAGIAIED------GPQGSTW 533
Query: 458 KQK 460
K
Sbjct: 534 SLK 536
>gi|167584729|ref|ZP_02377117.1| Cysteine--tRNA ligase [Burkholderia ubonensis Bu]
Length = 467
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 155/475 (32%), Positives = 231/475 (48%), Gaps = 37/475 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R + F AI ++ +Y CGPTVYD AHIGN R + D+L R+L
Sbjct: 1 MPLALYDTWSRTLRPFTAIHDDHVGLYCCGPTVYDHAHIGNLRTYVFEDILRRVLTRNGH 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
E V +V NITD+ +DK+ + +R+ S I + T F D
Sbjct: 61 E--VRHVVNITDVGHLTSDADEGEDKLEKGSRRTGRSA------WEIAAHYTDAFKADWR 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P+ RAT+HI + I I+ I G+ Y ++ + FDTS +YG +R
Sbjct: 113 ALNLLEPSIWCRATDHIAEQIAFIEEIERAGYVYRTDDGLYFDTSKQDDYGFLARLDRAG 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTP---MEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV K+N DF LWK S + W+SPWGRG PGWHIECSAMS+ YLG
Sbjct: 173 LQAGKRVAVG-AKRNATDFALWKFSPAEVRRQMEWDSPWGRGFPGWHIECSAMSAKYLGV 231
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIH GG D + HH NEIAQ+ A + AN W+H FL L+ KMSKSNG+F+ +
Sbjct: 232 WFDIHCGGEDHVAVHHSNEIAQTEAAHGT-RLANFWMHGHFLTLDATKMSKSNGDFVRLQ 290
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK-------WPQTST 342
L + R+ R L HYR ++F L ++ L++ WP +
Sbjct: 291 TLRD------RNVDPLAYRYLCLTAHYRSKLNFNWTSLDASQTALNRLRQLYSGWPDGGS 344
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+ + + DLN A+ L +L + + L +LG ++ +
Sbjct: 345 ADAAFVARFDAEVDQDLNMPRALAVLWELVKSNLPPATLKATMENFDAVLGFKLRDWRPS 404
Query: 403 -KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
++ A+ L+ ER + ++ AD IR+ L+++G+ +ED K+ +
Sbjct: 405 ASDVPEAVRALLGERERARAERNWARADEIRETLKARGWQIEDGKDGQRVTALAT 459
>gi|15899047|ref|NP_343652.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284175285|ref|ZP_06389254.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|21264020|sp|Q97WE6|SYC_SULSO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|13815580|gb|AAK42442.1| Cysteinyl-tRNA synthetase (cysS) [Sulfolobus solfataricus P2]
gi|261600795|gb|ACX90398.1| cysteinyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 470
Score = 321 bits (822), Expect = 2e-85, Method: Composition-based stats.
Identities = 167/486 (34%), Positives = 246/486 (50%), Gaps = 54/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +I++YN+L RK+ EF ++P+ ++MYVCGPTVYD+ HIG+ R +VFD + R LR
Sbjct: 1 MDFRIRVYNSLGRKLEEFGTVEPNLVKMYVCGPTVYDYVHIGHGRTFVVFDAISRYLRLR 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII+++++ + I T+ ++ ++L
Sbjct: 61 GY--TVIRVQNITDIDDKIIKKSQEIGKD------WNEIVDYFTKDYLDMLSQLKVK-ID 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR T HI ++I +Q +I GHAY + + FD + PNYG S K +E G
Sbjct: 112 IHPRVTQHIREIIDFVQRLIDKGHAYVAPSGSVYFDVDTYPNYGELSNTKKEEWNQGEEF 171
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KK+ DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG D
Sbjct: 172 VKE--KKHSYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGERFDIHGGGAD 229
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQ+ EK W+H+ F+ + KMSKS GN I +NE +
Sbjct: 230 LIFPHHENERAQTEALIG-EKWVTYWVHSAFVTIRKEKMSKSLGNIIPLNEAI------- 281
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
+ W V+R L +HYR PIDF+ + L +A+ L + + +
Sbjct: 282 KKWGPSVLRYWYLTSHYRSPIDFSEEALEQAKSALQRIKDSMAIIRDVISEGPKFYVKDD 341
Query: 349 ------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
+A+ ND +T +A+ +H++ R
Sbjct: 342 DIKVYREILNNLNNFHTAMSNDFDTSTALSYIHEIVRLVFSTLQYSRDFLGAMLAFETLK 401
Query: 387 ASAHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ G+ + + + I+ +V R L +MK + +D IR++L G + D
Sbjct: 402 QFNEVFGVMDEEFYPTYDKMYKIIDAVVDIRNQLRQMKLYEISDKIREELLKAGVRILDS 461
Query: 446 KNPDNG 451
K+
Sbjct: 462 KDKSTW 467
>gi|213691306|ref|YP_002321892.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|213522767|gb|ACJ51514.1| cysteinyl-tRNA synthetase [Bifidobacterium longum subsp. infantis
ATCC 15697]
gi|320457373|dbj|BAJ67994.1| cysteinyl-tRNA synthase [Bifidobacterium longum subsp. infantis
ATCC 15697]
Length = 549
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 153/542 (28%), Positives = 225/542 (41%), Gaps = 109/542 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILDKAAAAG------QRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTSEVDEA 202
Query: 178 RVPEK-----------------------YHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGADKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+C A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTCAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVAAVSADDLPADFVAAMNDDVNVSGATAAIFTAIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSETAKAEVREALLAVRAMLDTLGLDPLAEPWVSAGVAGGAADGTAE 493
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + I + + R K K F AD IR L G +ED G + + W
Sbjct: 494 SPEHAALEALIAEQLNARAEARKAKDFVKADQIRDALTEAGIAIED------GPQGSTWS 547
Query: 459 QK 460
K
Sbjct: 548 LK 549
>gi|94985814|ref|YP_605178.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
gi|123381854|sp|Q1IXM5|SYC_DEIGD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|94556095|gb|ABF46009.1| cysteinyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
Length = 497
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 167/504 (33%), Positives = 238/504 (47%), Gaps = 69/504 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I +Y+T++R+ F P + MY+CGPTVY AH+G+A+ + FDV+ R L ++
Sbjct: 17 DSGIVLYDTMQRQKVPFVPSVPGRVGMYLCGPTVYSDAHLGHAKKEVAFDVIRRTLLHFG 76
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V YV N+TD+ +DKI RA E + K FV+D
Sbjct: 77 YQ--VRYVTNVTDVGHLQDDSDDGEDKIARRAALERLE------PMEVADKYFWSFVEDM 128
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L L P+ PRAT HIP+ I LI+ +I GHAY ++ + FD S P YG S R++D
Sbjct: 129 EALNVLKPSINPRATGHIPEQIALIEELIERGHAYVSDGSVYFDVRSWPEYGKLSGRRLD 188
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKV 230
E + GTR + K++P DF LWKR+ P W SPWG G PGWHIECSAMS YLG+
Sbjct: 189 ELEEGTREAVREEKRDPRDFALWKRAEPGHLMRWASPWGEGFPGWHIECSAMSLKYLGEG 248
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGGLDL FPHHE EIAQ+ A A W+HN + + G KMSKS GNF T+
Sbjct: 249 FDIHGGGLDLEFPHHEAEIAQAEAAG--HPFARYWLHNNMVTVGGEKMSKSKGNFTTLKA 306
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
L VIR ++ +HYR +F+ A + + PA
Sbjct: 307 LFAQH-------DPMVIRFLLVSSHYRSITEFSDAAFESARSGYRRLTEALHEIERRLPA 359
Query: 351 VLSALYN-------------------DLNTVSAIQALHKLARESTKNHDLLPIFNASA-- 389
D NT A+ AL L + + + +
Sbjct: 360 APDQDDPALLEKIAGHIRTFEDAMRDDFNTPRAVAALFGLTTDVNAALNAGEVGRQALTA 419
Query: 390 ----------HILGIEV----CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+LG+ +E ++ ++ +E ++Q R K+++ AD +R L
Sbjct: 420 ARDAYRTLGGGVLGLFAEGRTEREDDSQIVNALMELVLQARQHYRLQKQYAQADELRNTL 479
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ G +ED + RW++
Sbjct: 480 AAVGVTVEDTREGP------RWRR 497
>gi|163785456|ref|ZP_02180059.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879275|gb|EDP73176.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 436
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 155/421 (36%), Positives = 220/421 (52%), Gaps = 47/421 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNTL + EF I+P +++Y CG TVYD H+G+ R +IVFD++ R LRY
Sbjct: 1 MSLKVYNTLSGQKEEFVPINPGEVKIYTCGVTVYDVNHVGHGRSLIVFDMIRRYLRYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRN TD+DDKII RA+ E ++I + +++ +D +
Sbjct: 61 --NVKFVRNFTDVDDKIINRAKNECL------PFTVIADRYIKEYFQDAENFRIEPADVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T HIP +I IQ +I G+AYE ++ F +YG S+R +DE G RV
Sbjct: 113 PRVTTHIPDIIDFIQKLIDKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK S EP W+SPWG+GRPGWH EC AM +LG+ DIHGGGLDL F
Sbjct: 173 EKKKDPLDFALWKASKAGEPAWDSPWGKGRPGWHTECCAMIFKHLGETIDIHGGGLDLTF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQ+ + A WIHNG + + G+KMSKS GN+IT+ E+ +
Sbjct: 233 PHHENELAQAEALS-EKPFARYWIHNGLVTVNGQKMSKSLGNYITLKEIYS-------KY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
++RL +L HYR P+DF+ +++ E + + I+
Sbjct: 285 EPDILRLLVLSVHYRSPLDFSWEKMEETKKAYERLKNAMDEYEILEKLPENPDFEGHLYD 344
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHI 391
+ +A+ +D NT A+ AL L RE D L + +A +
Sbjct: 345 AIAKAEQGFYAAMSDDFNTPEALAALFSLVREMNILKDKAVKEGGISKKALASYKEAAEV 404
Query: 392 L 392
L
Sbjct: 405 L 405
>gi|154151531|ref|YP_001405149.1| cysteinyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
gi|154000083|gb|ABS56506.1| cysteinyl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 419
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 161/446 (36%), Positives = 232/446 (52%), Gaps = 32/446 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+TL R + + P + ++VCGPTVYD++H+G+AR +VFDVL + LR+ K
Sbjct: 1 MKLYSTLSRTVEPLVTLHPDRVALFVCGPTVYDYSHLGHARTYVVFDVLAKYLRWNG--K 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII RA++E S S + K ++++D L A ++ R
Sbjct: 59 EVFYLQNITDVDDKIINRAKEEGVSQ------SELARKFETEYLRDMKSLGIDAVSYYAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HIP++I ++ ++ G AY + + F+ + G S E+
Sbjct: 113 ATTHIPEIIDQVRRLVDKGVAYVTDTGVYFNLDTFDRNGELSG---QERAKRKSRVSDSS 169
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K N DF LWK E W+SPWGRGRPGWHIE +A+S Y G+ +D+HGGGLDLIFPH
Sbjct: 170 KHNALDFALWKLGEFGEYTWDSPWGRGRPGWHIEDTAISEKYFGQQYDMHGGGLDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ + W+H GFL ++G KMSKS GNFITI + L ++W
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWLHTGFLTVKGEKMSKSLGNFITIRDAL-------KTWNK 282
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----PAVLSALYNDLN 360
V+R ++L++HYR P+ T + A L +T D A A+ DLN
Sbjct: 283 DVLRYSILLSHYRSPLQATDEGFANAAKGLEHIRAIATKDKGADAEGRKAFTDAMETDLN 342
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
T AI A+ +LA L ILGI +E + R L
Sbjct: 343 TPMAIAAIQRLAGNG-----DLEALREYGEILGINFLRESSAPLSVLE-----DIRAELR 392
Query: 421 KMKKFSSADYIRKQLESKGFILEDYK 446
K+F +D IR ++ + G + D +
Sbjct: 393 AKKQFEVSDLIRDRMAAAGIHITDKR 418
>gi|315227039|ref|ZP_07868826.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
gi|315119489|gb|EFT82622.1| cysteinyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
Length = 557
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 153/547 (27%), Positives = 230/547 (42%), Gaps = 117/547 (21%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IY+T K+ +F+ + P + MYVCG TV H+G+ R + FDV+ R E
Sbjct: 24 RIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGYE-- 81
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT+VRN+TDIDDKI+++A + Q+F + L L PT++PRA
Sbjct: 82 VTFVRNVTDIDDKILDKAAADG------QNWWARAYYYEQEFSQAYRVLGVLTPTYEPRA 135
Query: 126 TNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ----- 173
T H+ M+ L+Q +I GHAY + + FD S P+YG + ++ Q
Sbjct: 136 TGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQATGDE 195
Query: 174 --------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK S +P W +P+G
Sbjct: 196 SARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTPFGT 255
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWH+ECSAMS YLG FDIHGGGLDL FPHHENE+AQS A A+ W+H+ +
Sbjct: 256 GRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGWG--FAHYWMHSAW 313
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN ++I +L ++R A+ YR ++++ Q + EA
Sbjct: 314 VTQKGEKMSKSLGNGLSIPVVLSQCT-------PWMVRYALATVQYRSMLEWSQQTIAEA 366
Query: 331 EILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVSAIQALHKLAR 373
+ S+ G + ++A+ +D N +A+ A+ R
Sbjct: 367 QSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFSSIR 426
Query: 374 ESTKNHDLLPIF--------------------NASAHILGIEVCKEHL------------ 401
+ L A + G++
Sbjct: 427 YGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPAQAE 486
Query: 402 ----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+K + I + +R K K F+ AD IR L + G +ED
Sbjct: 487 DSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISIEDG 546
Query: 446 KNPDNGQ 452
+ +
Sbjct: 547 PQGSSWK 553
>gi|320108591|ref|YP_004184181.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
gi|319927112|gb|ADV84187.1| cysteinyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
Length = 492
Score = 320 bits (821), Expect = 2e-85, Method: Composition-based stats.
Identities = 166/513 (32%), Positives = 234/513 (45%), Gaps = 76/513 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I ++NTL ++ + +RMY CGPTVYD+ HIGN R + DVL R
Sbjct: 1 MAIDLFNTLGGRVEALVPQHDNELRMYCCGPTVYDYGHIGNFRTFLHVDVLRRFAALKG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ +V N+TD+DDKII A N I+ T+K + F +D L P
Sbjct: 60 -MKLKHVMNVTDVDDKIIRNAAA------ANMPIAEYTAKFERAFFEDMDALGVQRPEII 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
RAT +I M+ LI+ + AY+ + F + P+YG S++ D + G RV
Sbjct: 113 ARATENIGDMVTLIEKLASEDIAYKTEDGSWYFRIARFPDYGKLSKKDFDGIEDGARVDV 172
Query: 182 KYHKKN-PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++K+ DF LWK P E W++ G GRPGWHIECSAM+ +LG FD+H GG DL
Sbjct: 173 DEYEKDAARDFALWKAVKPNEHSWDTSLGIGRPGWHIECSAMAMKHLGPTFDLHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQS A + A W H FL +EG+KMSKS GNF T+ +LL +
Sbjct: 233 TFPHHENEIAQSEAASHV-PLARHWFHVRFLLVEGKKMSKSEGNFYTLRDLL------LK 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----- 355
+ A IR +L YR ++FT + LTE+ + + + + AV
Sbjct: 286 GYRASAIRFLLLSVPYRHQMNFTFEGLTESANAIDRLRTFARRLDKGEFAVGENAGLAAL 345
Query: 356 ------------YNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
NDLNT A A+ L R + D + + I
Sbjct: 346 TTEKLRLFDAALSNDLNTAEARAAIFDLVRAANSAADTGTLLAGNVASIRDLLARFDSIF 405
Query: 393 GIEVCKEH-------------------------LNKNISIAIEKLVQERLILLKMKKFSS 427
+ ++ + I+KLV ER + K + F+
Sbjct: 406 DVLTDRDQQVTRDALAWAEAEGRLGEAAPDLVASSSFSEDDIQKLVDERTLAKKQRNFAR 465
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD IRK+L KG ++ED K+ WK+K
Sbjct: 466 ADAIRKELAEKGILIEDGKD------GVSWKRK 492
>gi|294787393|ref|ZP_06752646.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
gi|294484749|gb|EFG32384.1| cysteine--tRNA ligase [Parascardovia denticolens F0305]
Length = 550
Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats.
Identities = 153/547 (27%), Positives = 230/547 (42%), Gaps = 117/547 (21%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+IY+T K+ +F+ + P + MYVCG TV H+G+ R + FDV+ R E
Sbjct: 17 RIYDTAHHKVMDFRPVTPGKVTMYVCGATVQASPHVGHVRAGVSFDVIRRWFMKLGYE-- 74
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VT+VRN+TDIDDKI+++A + Q+F + L L PT++PRA
Sbjct: 75 VTFVRNVTDIDDKILDKAAADG------QNWWARAYYYEQEFSQAYRVLGVLTPTYEPRA 128
Query: 126 TNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ----- 173
T H+ M+ L+Q +I GHAY + + FD S P+YG + ++ Q
Sbjct: 129 TGHVTDMVDLVQRLIDRGHAYLIPNPDGSPSGNVYFDVPSWPHYGELTHQQAGTQATGDE 188
Query: 174 --------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK S +P W +P+G
Sbjct: 189 SARIADAMGPSVDAAGEDKYNPADEADLSEEKHDPRDFALWKASKDSDPLTARWRTPFGT 248
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWH+ECSAMS YLG FDIHGGGLDL FPHHENE+AQS A A+ W+H+ +
Sbjct: 249 GRPGWHLECSAMSHRYLGDEFDIHGGGLDLRFPHHENEMAQSRAAGWG--FAHYWMHSAW 306
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN ++I +L ++R A+ YR ++++ Q + EA
Sbjct: 307 VTQKGEKMSKSLGNGLSIPVVLSQCT-------PWMVRYALATVQYRSMLEWSQQTIAEA 359
Query: 331 EILLSKWPQTSTSKGI-----------------IDPAVLSALYNDLNTVSAIQALHKLAR 373
+ S+ G + ++A+ +D N +A+ A+ R
Sbjct: 360 QSAYSRISNFLDHAGAAVGQPSRQEVTSYPADQLPQDFIAAMNDDFNVSTALAAVFSSIR 419
Query: 374 ESTKNHDLLPIF--------------------NASAHILGIEVCKEHL------------ 401
+ L A + G++
Sbjct: 420 YGNTTMNDLATLPEGSERDQAITLLKESLLLVRAMLDVFGLDPLDPQWLPGGDGFPAQAE 479
Query: 402 ----------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+K + I + +R K K F+ AD IR L + G +ED
Sbjct: 480 DSAQADKTSGASSSQTSKVLDSLIRSQLDQRQAARKAKDFARADAIRNSLAAAGISIEDG 539
Query: 446 KNPDNGQ 452
+ +
Sbjct: 540 PQGSSWK 546
>gi|300855265|ref|YP_003780249.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
gi|300435380|gb|ADK15147.1| cysteinyl-tRNA synthetase [Clostridium ljungdahlii DSM 13528]
Length = 471
Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats.
Identities = 142/480 (29%), Positives = 215/480 (44%), Gaps = 47/480 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+YNT+ RK EF ++ + +Y CGPTVY++AHIGN R I D+L + YG
Sbjct: 1 MNFYVYNTMSRKKEEFVPVNEGKVGIYTCGPTVYNYAHIGNLRTYIFEDILKKAFE--YG 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+ A +E N + I F +D
Sbjct: 59 HYKVKHVMNITDVGHLQSDADTGEDKMQIGAERE------NKTVWEIAKFYENAFFEDCH 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L P +AT+HI MI +I+ + G+ Y + + ++ +Y + ++E
Sbjct: 113 KLNIRKPDIVCKATDHIQDMIDIIKTLEKKGYTYTSKGNVYYEIDKFKDYNKLANLSMEE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G R+ +KKNP DF+LW + W SPWG+G PGWHIECSAMS YLG
Sbjct: 173 LEAGARIDVDENKKNPLDFVLWFTNSKFKDQIMQWNSPWGKGFPGWHIECSAMSIKYLGD 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+D I HH NEIA+S K N W+H FL L KMSKS G
Sbjct: 233 RIDIHCGGVDHIPVHHTNEIAESEAVLG-HKWVNYWMHGEFLVLSDGKMSKSKG------ 285
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------ 337
+ L K + R L + YR+ + F+ L +A++ K
Sbjct: 286 DFLTLSKIEKEGFSPMDYRYFCLQSRYRKQLMFSFDALRQAQLAYKKLKEKVADIVSNVK 345
Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-NASAHILG 393
+ +DLN +A L ++ +++ + + + +
Sbjct: 346 ENERADKELVNKYKNKFQEKISDDLNIPNAFTVLFEVIKDNELTNKEKSLLIESFDTVFS 405
Query: 394 IEVCKE---HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+++ K +L K S I++L+ ER K + AD IR +L+S G + D K
Sbjct: 406 LDLLKSNNHNLEKLDSEDIKRLICERNDARNHKDWHKADVIRDELKSMGIDIIDSKEGTK 465
>gi|320527638|ref|ZP_08028812.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
gi|320131959|gb|EFW24515.1| cysteinyl-tRNA synthetase [Solobacterium moorei F0204]
Length = 444
Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats.
Identities = 164/463 (35%), Positives = 235/463 (50%), Gaps = 48/463 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YNT +I EF+ I ++ MYVCGPTVY++AHIGNARPMIVFDVL RL
Sbjct: 1 MIRLYNTKTLQIEEFKPIHEGHVDMYVCGPTVYNYAHIGNARPMIVFDVLKRLFEAEGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYV N TD+DDKII++A +E N ++I + + + T L P P
Sbjct: 60 -SVTYVSNFTDVDDKIIKKAAEE------NTTEAVIAQRYIDAYQEVRTLLNTELPDITP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T + ++I I ++ GHAYEAN ++ F S+P YG S + +D+ + G R+
Sbjct: 113 RVTETMDKIIDFIDQLVKTGHAYEANGDVYFSVESVPTYGEISHQHMDQLEAGARIETND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK+ T M W SPWG GRPGWH EC M + +G DIHGGG+DL FP
Sbjct: 173 QKKNPYDFALWKK-TDMGIKWNSPWGEGRPGWHTECVVMINDNIGDCIDIHGGGMDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ AN W+HN +N++G+KMSKS GN + +++ +
Sbjct: 232 HHENEAAQQEAMHGN-TLANYWVHNAMVNIDGQKMSKSLGNTMWAKDVVLSLGT------ 284
Query: 304 APVIRLAMLMTHYREPIDFTVQ----RLTEAEILLSKWPQTSTSKGIIDPAV-------- 351
+ R + HYR+ ++F+ + E + +L+ Q + D A+
Sbjct: 285 -NLTRWLVSSVHYRKELNFSDETIETARKELDKVLTPLKQAYIKAALADNAMGDDYDKDS 343
Query: 352 ----LSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEV 396
L L +D+NT +A + + ++ + I ++LGI V
Sbjct: 344 YRAFLDCLDDDMNTPNAYAVIFETVKKLNQTLRQREIDFAQVALYSNAVEKMLNVLGIVV 403
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
K I A ++L + K F +AD R +L KG
Sbjct: 404 DKP----VIGEAEKELFAKWNQAKADKDFDTADKYRNELAEKG 442
>gi|118576528|ref|YP_876271.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
gi|118195049|gb|ABK77967.1| cysteinyl-tRNA synthetase [Cenarchaeum symbiosum A]
Length = 455
Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats.
Identities = 180/469 (38%), Positives = 248/469 (52%), Gaps = 45/469 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++TL+ K E + +Y+CG TVYD AHIG+AR +IVFDVL R L E
Sbjct: 1 MRIHDTLDGKKKE---VRADKAGIYLCGVTVYDEAHIGHARTIIVFDVLRRHLESRGTE- 56
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+N TD+DDKIIERAR E S ++++ + + + RL + P
Sbjct: 57 -VRLVQNFTDVDDKIIERARSEGTSA------QELSARYIRAYHAEFGRLGVRRASEYPL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT H+P+++ LI++++ G AY A N + F S P YGS SR G RV
Sbjct: 110 ATEHMPEILELIKSLVGSGSAYAAPNGVYFSVSGFPRYGSLSR-NTGGLISGARVGIDAG 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK + +P WESPWGRGRPGWHIECSAM YLG+ F+IHGGG DLIFPH
Sbjct: 169 KRDPTDFALWK-LSRGDPSWESPWGRGRPGWHIECSAMCLKYLGETFEIHGGGRDLIFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE+AQS + A IW+H G + ++G KMSKS GN ++ LLE W
Sbjct: 228 HENEMAQSEAHTGR-RLAKIWMHVGMVTIDGEKMSKSLGNMKSVRFLLER-------WSP 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------------SKGIIDPAV 351
+R+ + HY +P+D++ + L E E + + G +
Sbjct: 280 GAMRIFCIAGHYSKPVDYSEELLEEHETFWERARLAYHVLVQGKPAPGGDDTAGRLWAEF 339
Query: 352 LSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
+AL +DLNT A+ A L K+ +LL IF+A +LG+E+ L
Sbjct: 340 GNALDDDLNTHLALDAFRSLVSYCLGGPKDSELLRIFDAMLGVLGLEI--PVLTGGERTR 397
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+E L+ ER L + AD+IR L SKG L+D G T W
Sbjct: 398 VEGLISERARLRGNGLYDEADHIRDNLASKGITLQD------GPEGTIW 440
>gi|303290903|ref|XP_003064738.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226453764|gb|EEH51072.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 479
Score = 320 bits (820), Expect = 3e-85, Method: Composition-based stats.
Identities = 177/482 (36%), Positives = 239/482 (49%), Gaps = 64/482 (13%)
Query: 11 LERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
+ RK F DP + MYVCG TVYD++HIG+AR + FDVLYR L + VTY
Sbjct: 1 MTRKKEPFAPNDPDDKKVSMYVCGVTVYDYSHIGHARVYVAFDVLYRTLTRLGYD--VTY 58
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
VRN TD+DDKII+RA + + + + F +D + L CL PT +PRAT H
Sbjct: 59 VRNFTDVDDKIIKRANENG------EECDALVERFIAAFHEDMSSLGCLPPTMEPRATRH 112
Query: 129 IPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ ++ + + ++ GHAY A ++ F S+P YG S RK+++ + G RV KKN
Sbjct: 113 VDDILRVTEALVEKGHAYPAEGGDVYFSVDSLPTYGKLSGRKLEDNRAGERVAIDERKKN 172
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH-YLGKVFDIHGGGLDLIFPHHE 246
PADF LWK S P EP W SPWG GRPGWHIECSAM + GK DIHGGG DL+FPHHE
Sbjct: 173 PADFALWKASKPGEPSWASPWGEGRPGWHIECSAMIDATFGGKSIDIHGGGQDLVFPHHE 232
Query: 247 NEIAQSCCADRIE----------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
NE+AQS W+HNGF+ ++ KMSKS GNF TI E+
Sbjct: 233 NELAQSTAFCGCCDDAKDAKDAPPFVKYWVHNGFVKVDSEKMSKSLGNFFTIREVTA--- 289
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-SAL 355
+ A +R +L THYR I++T + L EA L QT + + +AL
Sbjct: 290 ----KYDATALRWMLLGTHYRAAINYTQRALEEASDRLYYLYQTLSEASDETETAVGAAL 345
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI-------- 407
+DLNT AI +L + A I ++ + + +
Sbjct: 346 SDDLNTPLAIASLSSPLKLLNDFVSTKKGKKAQGRIAAMKALVRAVTETLDAVGLPSAKA 405
Query: 408 -AIEKLVQERLIL---------LKM--------------KKFSSADYIRKQLESKGFILE 443
A++ L ERL + K F+ +D IR +L +KG L
Sbjct: 406 DAVDVL--ERLRALTLTRAGLSREDVDAAVAARKAAREAKDFAESDRIRDELGAKGVALM 463
Query: 444 DY 445
D
Sbjct: 464 DG 465
>gi|157165603|ref|YP_001466909.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
gi|166200138|sp|A7ZDQ1|SYC_CAMC1 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|112800284|gb|EAT97628.1| cysteinyl-tRNA synthetase [Campylobacter concisus 13826]
Length = 464
Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats.
Identities = 147/481 (30%), Positives = 233/481 (48%), Gaps = 52/481 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++T +R+ EF I + +Y+CGPTVYD AH+G+A+ + FD+L R+L+
Sbjct: 1 MRIFDTSKREKVEFSPIKDGEVSIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLKALG--C 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+ + Q S+ IT+K + D L L P +P+
Sbjct: 59 KVKFARNYTDIDDKILNKMAQTGQSLE------EITNKYIAHYESDMGALNVLDPDFKPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + +I I+ ++ G AY+ ++ I FDTS Y S S + + +
Sbjct: 113 ATQCLEAIISYIKVLMDRGVAYKTSDGIYFDTSKDSGYFSISGKDNNTDLIARVASFGE- 171
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV------FDIHGGGL 238
K++ DF+LWK E +ESP+G+GRPGWH EC AM +L DIH GG+
Sbjct: 172 KRDEKDFVLWKF---DEKWYESPFGKGRPGWHTECVAMIREFLSDKENDKFEIDIHAGGI 228
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE +Q CA + + W+HNGF+ + KMSKS N + + L
Sbjct: 229 DLLFPHHENEASQCRCAYH-KNLSKYWMHNGFIKVNNEKMSKSLNNSFFVKDAL------ 281
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIIDP 349
++ V+R +L +HYR +++ + L ++ L K Q +
Sbjct: 282 -KNVHGEVLRYYLLTSHYRAHFNYSDEDLVASKKRLDKIYRLKKRVDGVQAGMANESFKS 340
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L AL +DLN A+ ++ + + + + D ++ ILGI
Sbjct: 341 ELLEALSDDLNASKALASVDEFVKTANERLDNNPKDKAYKAEVVANLELIGEILGIAITN 400
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + ++ I+KL+ ER + K + F+ AD IR +L + D N +
Sbjct: 401 YVEYFQFGVSDEQKEHIQKLLDERAVAKKERNFARADEIRDELAKMNISIMDTPNGAVWE 460
Query: 453 R 453
R
Sbjct: 461 R 461
>gi|218884115|ref|YP_002428497.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218765731|gb|ACL11130.1| cysteinyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 481
Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats.
Identities = 167/493 (33%), Positives = 233/493 (47%), Gaps = 56/493 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M IKIY+TL R + E Q I+P ++MYVCGPTVYD+ HIG+ + +++D R L
Sbjct: 4 MLPAIKIYDTLSRDLKELQPIEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLR 63
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +V NITDIDDKII+R++ E S I + T+ ++ +L
Sbjct: 64 GY--HVVHVMNITDIDDKIIKRSQDEGRD------WSEIVDEYTRDYLSALEKLNV-TID 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PR + HI ++I IQ +I G+AY ++ + F+ +YG S R E +
Sbjct: 115 HHPRVSEHINEIIGFIQGLIDKGYAYIASSGSVYFNVDKYDDYGHLSGRVSKETWGQEQE 174
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K+NP DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG FDIHGGG D
Sbjct: 175 FLSE-KRNPYDFALWKAAKPGEPYWESPWGRGRPGWHIECSVMSSRYLGSRFDIHGGGTD 233
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS + +IW+H+G + + KMSKS N I + E
Sbjct: 234 LIFPHHENERAQSEAFFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIIPLKEAF------- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------- 340
W +RL L THYR+P+ F+ + L + L +
Sbjct: 287 NKWGPMPLRLWYLSTHYRKPLYFSEEALENSVKLYERLTTAAQLLRRLAHESTGLHYARE 346
Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHK----LARESTKN------HDLLPIF 385
+ +AL +D NT A+ +++ L R+ N + +
Sbjct: 347 EDLKVFNQLVSLHTRFHNALSDDFNTAEALAVVNEYLTILFRDIQYNPRHLLVSTSIKLL 406
Query: 386 NASAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LG+ + E + +E L+ R L K + +D IR L G
Sbjct: 407 REFNTVLGVLDRELEGVEESEALLDSMVEILINVRKELRKRGIYDLSDTIRSDLSKIGIQ 466
Query: 442 LEDYKNPDNGQRM 454
L D R+
Sbjct: 467 LMDKGLETTWVRV 479
>gi|197122993|ref|YP_002134944.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|229558614|sp|B4UGC3|SYC_ANASK RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|196172842|gb|ACG73815.1| cysteinyl-tRNA synthetase [Anaeromyxobacter sp. K]
Length = 481
Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats.
Identities = 174/502 (34%), Positives = 248/502 (49%), Gaps = 65/502 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++TL + E ++P +R+YVCGPTVYD++H+G+AR +V+DV+ R LR
Sbjct: 1 MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN TD+DDKII+RA + + + S+ F +D L L P +
Sbjct: 61 E--VRFVRNFTDVDDKIIQRANERG------EDPIALASRFADAFHEDMDALGNLRPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HIP+++ LI ++ G AY N ++ + P YG S+R +D+ G RV
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+ +LG D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232
Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
FPHH NEIAQS A E A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ +R +L THYR +F+ Q L EAE LS +T
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGAAPAAEP 345
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
+AL +D NT + + + E+ D L F A
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSPEEKARLAAFARGARAVGA 405
Query: 391 ILGIEVCKEH------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LGI +E+ + ER K F+ +D IR L ++
Sbjct: 406 VLGILDRPPAQALSAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLAR 465
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G +L D G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481
>gi|118431525|ref|NP_148045.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
gi|150421675|sp|Q9YBK6|SYC_AERPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116062850|dbj|BAA80592.2| cysteinyl-tRNA synthetase [Aeropyrum pernix K1]
Length = 472
Score = 320 bits (819), Expect = 4e-85, Method: Composition-based stats.
Identities = 169/496 (34%), Positives = 234/496 (47%), Gaps = 63/496 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+++NTL R+ F P + MYVCGPTVYD+ HIG+AR VFD + R LR +
Sbjct: 1 MIRVFNTLGRRKEVFNPYSPPLVGMYVCGPTVYDYTHIGHARTFTVFDAIKRYLRLRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+NITDIDDKII RAR+E I + ++ +++ L H P
Sbjct: 61 --VFHVQNITDIDDKIINRAREEGRD------WREIVREYSRDYLEGLGSLGIQ-IDHHP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T+HI +I I+ +I G+AY + + F+ P YG S E
Sbjct: 112 RVTDHISDIIRFIEGLIEKGYAYVAESGSVYFEVDKYPGYGMLSGHLSKEAWRQEEDVLH 171
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG DIHGGG+DL+F
Sbjct: 172 E-KKSPYDFALWKAAKPGEPSWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGGGVDLVF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS + W+H +L ++G KMSKS GN I + E L R W
Sbjct: 231 PHHENERAQSESYFG-HRWVRYWLHASYLTIKGEKMSKSLGNIIPLREAL-------REW 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------------- 346
+RL +L +HYR +D++ + L + L + Q + S G
Sbjct: 283 GPGPLRLWLLSSHYRSNLDYSEEALGQYRRLYERLRQAADSIGRRLERAEPKGRLGEGEL 342
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---IFNASAHIL--- 392
+ A+ +D N A+ +L + + + + S IL
Sbjct: 343 ETVERLKGVVRRWHEAMSDDFNMGKAMSSLWEFTTIYFREVEQTESYTLLWLSWRILTGF 402
Query: 393 --------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
I + ++ LV R L + K + AD IR +L GF+L D
Sbjct: 403 NSVYAFAPDIVEARRPERSLEDSLVQALVDVRSELRRRKMYDLADEIRSRLAQLGFVLHD 462
Query: 445 YKNPDNGQRMTRWKQK 460
T W+++
Sbjct: 463 KGEK------TEWRRR 472
>gi|220917782|ref|YP_002493086.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|254765172|sp|B8JDH1|SYC_ANAD2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|219955636|gb|ACL66020.1| cysteinyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 481
Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats.
Identities = 174/502 (34%), Positives = 248/502 (49%), Gaps = 65/502 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I++++TL + E ++P +R+YVCGPTVYD++H+G+AR +V+DV+ R LR
Sbjct: 1 MSIQVHDTLTAQKRELVPLEPGKLRLYVCGPTVYDYSHLGHARCYVVWDVVVRHLRARGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN TD+DDKII+RA + + + S+ F +D L L P +
Sbjct: 61 E--VRFVRNFTDVDDKIIQRANERG------EDPIALASRFADAFHEDMDALGNLRPDVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + HIP+++ LI ++ G AY N ++ + P YG S+R +D+ G RV
Sbjct: 113 PRVSGHIPEIVALIARLVERGFAYAPGNGDVYYAVRKFPEYGRLSKRNLDDLIAGARVEP 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP WESPWG+GRPGWHIECSAM+ +LG D+H GG DL+
Sbjct: 173 GEAKRDPLDFALWKAAKPGEPAWESPWGKGRPGWHIECSAMTQKHLGAPIDLHAGGKDLV 232
Query: 242 FPHHENEIAQSCCAD----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
FPHH NEIAQS A E A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 FPHHTNEIAQSVAATSDGLHAEDFARYWMHNGFVQIDDEKMSKSLGNFFTIRDVLAR--- 289
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
+ +R +L THYR +F+ Q L EAE LS +T
Sbjct: 290 ----FDGEALRFFLLGTHYRRDFNFSDQVLAEAERRLSALYETVEKAERLGAGAAPAAEP 345
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIF----NASAH 390
+AL +D NT + + + E+ D L F A
Sbjct: 346 AFVERARAALDDDFNTPQVLGIVAEAFTEANALADRKGKKSSEEKARLAAFARGARAVGA 405
Query: 391 ILGIEVCKEH------------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LGI +E+ + ER K F+ +D IR L ++
Sbjct: 406 VLGILDRPPAQALTAIRDRAAARRGIDGGEVERSIAERAAARAAKDFARSDAIRDALLAR 465
Query: 439 GFILEDYKNPDNGQRMTRWKQK 460
G +L D G + T WK +
Sbjct: 466 GVVLMD------GPQGTTWKVE 481
>gi|20089634|ref|NP_615709.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
gi|24418697|sp|Q8TSP6|SYC_METAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|19914556|gb|AAM04189.1| cysteinyl-tRNA synthetase [Methanosarcina acetivorans C2A]
Length = 473
Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats.
Identities = 157/487 (32%), Positives = 234/487 (48%), Gaps = 55/487 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNTL R+ F+ + I +Y CGPTVY+ HIGN R ++ D + R L Y
Sbjct: 1 MLQVYNTLTREKEIFKPVKEGEISIYACGPTVYNMPHIGNYRTFLMTDNVLRALEYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDK I ++ ++ T K T +F K L P
Sbjct: 60 -RVKLVMNITDIDDKTIRDSKAAGMTL------KDFTDKYTAEFFKGLDMLNIKRAFAYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT ++ MI L + +I G AYE + + + S P YG SR D +G V
Sbjct: 113 RATENVDGMIELARKLIEKGLAYEKDGSVYYRISGFPEYGKLSRLNFDNILIGASVDVDE 172
Query: 184 HK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ NP DF L K STP E ++SPWG+ RPGWHIECS M+ + G DIH GG+
Sbjct: 173 YDKDNPRDFALLKASTPEEIERGIYYDSPWGKIRPGWHIECSVMAMNSFGPTLDIHTGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A + WIH L +EG KMSKS N T+ E++E
Sbjct: 233 DLIFPHHENEIAQSEGATG-KPFVCTWIHGEHLIVEGEKMSKSKRNVFTLPEIVE----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ V+R L HYR+ +D++ A+ + +T +
Sbjct: 287 --KYGGEVVRFMFLSVHYRKKLDYSEAFAENAKNNYLRLKETLDNLEFSLKGADDKSYPG 344
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLP----IFN 386
++ AL +D NT A+ +L+R + KN +L ++
Sbjct: 345 DLETLKALPELETQFRHALEDDFNTPRALTVFRELSRTANLYLEAGKNRKVLEKVHTLYR 404
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ +LG+ + + I + +LV+ER K K + ++D +R+++ + G+I++D K
Sbjct: 405 KFSDVLGL--FAQAGKEEIPEEVFRLVEEREAARKKKDWGTSDTLREKIRTLGYIIQDKK 462
Query: 447 NPDNGQR 453
N ++
Sbjct: 463 EGPNVKK 469
>gi|171741395|ref|ZP_02917202.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
27678]
gi|283455255|ref|YP_003359819.1| cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
gi|171277009|gb|EDT44670.1| hypothetical protein BIFDEN_00478 [Bifidobacterium dentium ATCC
27678]
gi|283101889|gb|ADB08995.1| cysS Cysteinyl-tRNA synthetase [Bifidobacterium dentium Bd1]
Length = 547
Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats.
Identities = 150/534 (28%), Positives = 223/534 (41%), Gaps = 103/534 (19%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++K+Y+T ++ F + P + +YVCG TV HIG+ R + FDV+ R +
Sbjct: 28 ELKLYDTASHTVSSFVPLRPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRLGY- 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI+++A ++F + L PT++P
Sbjct: 87 -KVTFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYDTLGVEPPTYEP 139
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ--- 173
RAT H+ MI LI+ II +GH Y + FD +S P+YG + +K
Sbjct: 140 RATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSDD 199
Query: 174 --------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK +P W +P+G
Sbjct: 200 ASKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGT 259
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ +
Sbjct: 260 GRPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAW 317
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 318 VTAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLAEA 370
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + ++A+ +D+N A A+
Sbjct: 371 QSAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGATAAIFTAI 430
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHL-------------- 401
R L A LG++ E
Sbjct: 431 RSGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAAA 490
Query: 402 ----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + + + ER K K F+ AD IR L + G +ED
Sbjct: 491 DSAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIEDGPQGSTW 544
>gi|183221111|ref|YP_001839107.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Paris)']
gi|189911202|ref|YP_001962757.1| cysteinyl-tRNA synthetase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167775878|gb|ABZ94179.1| Cysteine--tRNA ligase [Leptospira biflexa serovar Patoc strain
'Patoc 1 (Ames)']
gi|167779533|gb|ABZ97831.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) [Leptospira
biflexa serovar Patoc strain 'Patoc 1 (Paris)']
Length = 485
Score = 319 bits (818), Expect = 5e-85, Method: Composition-based stats.
Identities = 161/493 (32%), Positives = 229/493 (46%), Gaps = 61/493 (12%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
NT K FQ DP+++ +Y CGPTVY+FAHIGN R + DVL R L G +
Sbjct: 10 NTKSGKKEPFQPKDPNSVTIYSCGPTVYNFAHIGNIRSFLFVDVLRRAL--LLGGYKLNQ 67
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
NITDIDDKII+ SI N ++ T T F KD L H P+AT
Sbjct: 68 SMNITDIDDKIIK------ESIKQNVSVEEFTKPWTDAFFKDLETLQVQKLEHYPKATES 121
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
I M+ L++ + +G AYE + + F YG S+ + K G R ++K+
Sbjct: 122 IDDMVTLVETLQSNGLAYERDGNVYFSIQKFNQYGELSKIDVSGMKSGVRYDADEYEKDD 181
Query: 189 -ADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
DF+LWK E W + G GRPGWH+ECSAM G DIH GG+DL+FPHHE
Sbjct: 182 VRDFVLWKNQKTKEEKCWHTRIGMGRPGWHLECSAMIRKIYGTGIDIHTGGIDLLFPHHE 241
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
NE AQS A E W+H L ++G KMSKS GNF T+ ++L + +
Sbjct: 242 NEFAQSVGAYPEETFVGTWLHCEHLLVDGEKMSKSKGNFYTLRDILN------KGFEPRA 295
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------------- 344
IR ++ HYR ++F++ +L E+++ L + T
Sbjct: 296 IRFHLISAHYRSKLNFSLGKLEESKVALDRIQNTIFRLLELNPSVDLNTNDWNQIHFTDP 355
Query: 345 --GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
+D L+A+ +DLN A+ L++ R ++ D N
Sbjct: 356 EIQTLDSDFLNAIADDLNVPKALATLYEFVRLVNQSLDQTKEKNADEFFKQCLGFFYKIN 415
Query: 387 ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+ + E KE L+ I + R + + K F++AD IRK+LE G +L D K
Sbjct: 416 SLFAVFSFEKQKETLDGISEDWILDQIANRKLAKQNKDFATADNIRKELEKIGILLTDTK 475
Query: 447 NPDNGQRMTRWKQ 459
+ T WK+
Sbjct: 476 EGN-----TTWKK 483
>gi|255513529|gb|EET89795.1| cysteinyl-tRNA synthetase [Candidatus Micrarchaeum acidiphilum
ARMAN-2]
Length = 482
Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats.
Identities = 161/498 (32%), Positives = 233/498 (46%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+ IYNTL R + EF+ + M+VCG T YD AH+G+AR IVFDV+ R LR+
Sbjct: 1 MKLHIYNTLSRSVEEFKPRLEGKVDMFVCGQTPYDDAHLGHARNYIVFDVVVRWLRHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-TH 121
+ V Y++NITDI+DKII RA++ + + ++F++D + T
Sbjct: 61 D--VRYIQNITDIEDKIINRAKERGITAE------ELERYYEKRFLEDMEAIGVKKNVTQ 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
R+ ++I M+ IQ ++ G+AY+ +++I +D +Y S K+ EQ R+
Sbjct: 113 YLRSHDYIDTMVMQIQMLLDGGYAYQIDSDIYYDVDKFVDYTKLSGMKL-EQLKEHRIEP 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGR--------GRPGWHIECSAMSSHYLGKVFDI 233
+ K+N DF LWK S P EP W+ GRPGWHIE +AM+ G +DI
Sbjct: 172 REGKRNVYDFALWKGSKPGEPSWKIKLRIGGNEIEFVGRPGWHIEDTAMTYAVFGPQYDI 231
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGG +LIFPHH NEIAQ+ A W+H G LN+ KMSKS NFITI E+L
Sbjct: 232 HGGASELIFPHHSNEIAQAEAAFGKVPFVRYWMHAGVLNVNNIKMSKSLKNFITIREILG 291
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------ 341
+ A +RL M+ THYR+ I++T + + EA+ L +
Sbjct: 292 -------KYDAEALRLLMVSTHYRKEINYTERLIKEAQEKLDYMYNSMGVLYNAKEGNDA 344
Query: 342 ------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLP 383
+D + D NT A+ L + +
Sbjct: 345 EGNDLAEKAVKLDSRFEELMNADFNTSVAVMELFGAFSDIRSYFESNRSIGHSNKETVYK 404
Query: 384 IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFIL 442
A LG+ + A+E L++ R L KKF AD IR++L K G L
Sbjct: 405 SLLKCAGALGLLESDAYKTGLEDEAME-LIKTREKLRVQKKFEDADRIRQELLEKYGLAL 463
Query: 443 EDYKNPDNGQRMTRWKQK 460
ED + T W +K
Sbjct: 464 EDT------EYGTIWFKK 475
>gi|115378641|ref|ZP_01465792.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115364353|gb|EAU63437.1| cysteinyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 458
Score = 319 bits (818), Expect = 6e-85, Method: Composition-based stats.
Identities = 165/475 (34%), Positives = 230/475 (48%), Gaps = 68/475 (14%)
Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
CGPTVY + HIGNAR FDV+ R LRY V YVRN TD+DDKII+ A +
Sbjct: 2 CGPTVYSYIHIGNARTFTSFDVVVRYLRYRGY--RVHYVRNYTDVDDKIIKAAHETG--- 56
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + F DT L + P P+ + H+P+++ +I+ ++ G AYE+
Sbjct: 57 ---EEPVALAGRFVKIFQDDTRALHLVEPDVAPKVSEHLPEILRIIETLVAKGVAYESQG 113
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
++ F SS P Y S+RK+D+ G RV K+ P DF LWK + P EP W+SPWG+
Sbjct: 114 DVYFSVSSYPEYAKLSKRKLDDLCAGERVQPGEQKREPLDFALWKAAKPGEPSWDSPWGK 173
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS+ YLG+ FDIHGG LDLIFPHHENEIAQS A + A W+H GF
Sbjct: 174 GRPGWHIECSAMSAKYLGESFDIHGGALDLIFPHHENEIAQSEAASG-KPFAKYWMHCGF 232
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
L++EG KMSKS GN + + + L A +R L THYR P+ F+ + + ++
Sbjct: 233 LDIEGAKMSKSLGNVVRLRDALTRV-------DAEALRFFFLSTHYRHPLHFSDKAIADS 285
Query: 331 EILLSKWPQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLA 372
E L + +T +A+ +D N A+ AL L
Sbjct: 286 EYRLEYFYETLRKVDERVGGKDFGQGPLHGEPGRFLQEFEAAMDDDFNCPGALGALSGLF 345
Query: 373 RESTKNHD----------------LLPIFNASAHILGIEVCKE------------HLNKN 404
+ D L + +LG+
Sbjct: 346 GLMNELTDKPPVKDKALVGRTLQALRDTVRKVSSVLGLFEDDPTQWLLRRRDRAVKERGI 405
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+E+L+ ER K K F+ AD +R +L+ +G + D T WK
Sbjct: 406 DVAQVERLLSERNEARKSKNFAEADRLRSELKGQGVEIMDT------VAGTSWKV 454
>gi|254708550|ref|ZP_05170378.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261316050|ref|ZP_05955247.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261305076|gb|EEY08573.1| cysteinyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
Length = 470
Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats.
Identities = 206/464 (44%), Positives = 267/464 (57%), Gaps = 52/464 (11%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG + VTY RNITD+DDKI RA ++
Sbjct: 2 RMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYGAQHVTYARNITDVDDKINARAARD 61
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+P +P N+AI +T QF D T L L PT QPRAT H+ +M +I ++ G AY
Sbjct: 62 YPDLPFNEAIRKVTESTNAQFQADVTALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVAY 121
Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
A + ++F S++ P YG+ +RR +DE G RV +K++ DF+LWK S E
Sbjct: 122 VAQDHVLFSPSAMNARKGPRYGALARRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKGE 181
Query: 202 PGWESPWGR---GRPGWHIECSAM--------------SSHYLGKVFDIHGGGLDLIFPH 244
PGW SP G GRPGWHIECSAM FDIHGGG+DL+FPH
Sbjct: 182 PGWPSPAGIETLGRPGWHIECSAMSMAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFPH 241
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL---------ETK 295
HENEIAQSCCA E+ ANIW+HNGFL +EG+KMSKS GNFITI ++L
Sbjct: 242 HENEIAQSCCALGTERMANIWMHNGFLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWGD 301
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
W RL+ML THYREPI++T QRL E+ L +W +G P LS
Sbjct: 302 NTVRDRWAGLAARLSMLQTHYREPINWTAQRLAESADELHRWYGLLRDEGFGAPEKLSHA 361
Query: 356 -------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI- 407
+DLN+ +AI AL R++ K D+ + A ++G+ ++ I
Sbjct: 362 SAVAAALCDDLNSWAAITAL----RQAFKVRDVAALGEGMA-LMGLLDPYFVTASDVPIF 416
Query: 408 --------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
AI + ERL + K ++ AD IR +L +G L+
Sbjct: 417 ARADVDASAIAARIAERLNFINAKNWAEADRIRDELLQEGVQLK 460
>gi|306823683|ref|ZP_07457058.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
gi|309802923|ref|ZP_07697024.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
gi|304553390|gb|EFM41302.1| cysteine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
gi|308220390|gb|EFO76701.1| cysteine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
Length = 557
Score = 319 bits (817), Expect = 7e-85, Method: Composition-based stats.
Identities = 150/533 (28%), Positives = 223/533 (41%), Gaps = 103/533 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F + P + +YVCG TV HIG+ R + FDV+ R +
Sbjct: 39 LKLYDTASHTVSSFVPLKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFQRLGY-- 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+T+VRN+TDIDDKI+++A ++F + L PT++PR
Sbjct: 97 KITFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYDALGVEPPTYEPR 150
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ---- 173
AT H+ MI LI+ II +GH Y + FD +S P+YG + +K
Sbjct: 151 ATGHMIDMIDLIRKIIDNGHGYVVTDENGNPTGNVYFDVASWPHYGELTHQKQTAVSDDA 210
Query: 174 -------------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 211 SKITDAMGPSVDNAGDDKYNPIDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTG 270
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ ++
Sbjct: 271 RPGWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAWV 328
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 329 TAKGEKMSKSLGNGLSVPAVLAEN-------SAWVVRYALGSVQYRSMLEWSDQTLAEAQ 381
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N AI A+ R
Sbjct: 382 SAYDRVANFIERAGAAVGEQPSHDEIAAISADALPADFVAAMNDDINVSGAIAAIFTAIR 441
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 442 SGNTLLSKLADRADSDAAKAEVREALVNVRAMLDTLGLDPLAEPWVNGGVAGGAAGAAAD 501
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + + + ER K K F+ AD IR L + G +ED
Sbjct: 502 SAEHAALDKLVSEQLAERAEARKSKDFARADAIRNALNAAGIAIEDGPQGSTW 554
>gi|50955382|ref|YP_062670.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|61216187|sp|Q6ADI1|SYC_LEIXX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|50951864|gb|AAT89565.1| cysteinyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 477
Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats.
Identities = 163/486 (33%), Positives = 235/486 (48%), Gaps = 50/486 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T + +F + + MYVCGPTV HIG+ R +V+D L R L Y
Sbjct: 1 MTLRLFDTKAGALRDFVPLRSGEVGMYVCGPTVQASPHIGHLRSALVYDQLRRWLTYRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDK++ A + + + ++F + L APT++
Sbjct: 60 -LAVTLVRNVTDIDDKVLANAAAAQAEGGS-EQWWALAYRFEREFTAASVALGVQAPTYE 117
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT IPQM +IQ +I GHAY + + ++ FD S P YG +R+ D +
Sbjct: 118 PRATASIPQMQEIIQRLIERGHAYAAGDGSGDVYFDVRSWPAYGELTRQSADSMEAAADA 177
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++ DF LWK EP + SPWG GRPGWHIECSAMS YLG FDIHGG
Sbjct: 178 DPR-AKRDGRDFALWKGRKADEPDSAAFPSPWGEGRPGWHIECSAMSRRYLGPRFDIHGG 236
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
GLDL FPHHENE+AQS A + AN W+HNG +N+ G+KMSKS GN ++ ELL +
Sbjct: 237 GLDLRFPHHENELAQSAAAG--DSFANYWVHNGLVNVNGQKMSKSLGNSVSAAELLGAAR 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTST 342
+R ++ HYR ID+ L+EAE L + T +
Sbjct: 295 -------PLAVRYSLGSAHYRSTIDYHDGSLSEAEAALERIAGFFERVDRRLAGTRFTGS 347
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILG 393
++ A A+ +DL A+ LH+ R A +LG
Sbjct: 348 GSEVVPIAFAEAMDDDLAVPQALAVLHETVRSGNAALDAEDLEAAAAARGQVFAMTEVLG 407
Query: 394 IEVCKEHL--------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
I + + +E+L+ R +++ F +AD IR++L G +ED
Sbjct: 408 INPLSPQWRQTGSSAAEQALGTLVERLLHNRQEARQVRDFVAADRIREELTGAGITIEDT 467
Query: 446 KNPDNG 451
+
Sbjct: 468 PTGCHW 473
>gi|328950671|ref|YP_004368006.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328450995|gb|AEB11896.1| cysteinyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 481
Score = 319 bits (817), Expect = 8e-85, Method: Composition-based stats.
Identities = 163/507 (32%), Positives = 231/507 (45%), Gaps = 88/507 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IYNTL R+ F+ P + +YVCGPTVY H+G+AR I +DVL R L++
Sbjct: 1 MSLVIYNTLSRRKEAFEPATPGYVGIYVCGPTVYSDPHLGHARGPITYDVLRRWLQHLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DKI +RA+ E + K ++ D
Sbjct: 61 --KVRFVSNITDVGHLTDDADEGEDKIQKRAKLERLE------PMEVAEKYMWRYFDDMR 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L L P PRAT HIP+ I L Q +I G+AYE N + F + P YG S +++DE
Sbjct: 113 DLNVLRPDIAPRATGHIPEQIELTQRLIERGYAYERNGSVYFRAAKWPGYGRLSGKRLDE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
G RV + K++P D+ LWK + P W+SPWG G PGWHIECSAMS YLG+ F
Sbjct: 173 LVAGARVAVREEKEDPRDWALWKAADPGHIMRWKSPWGEGYPGWHIECSAMSLKYLGENF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+DL FPHHE EIAQ+ A K A W+H+ + L G KM+KS GN + + EL
Sbjct: 233 DIHAGGIDLQFPHHECEIAQAEAAGY--KFARYWMHHNHVLLNGEKMAKSTGNLVVLREL 290
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------- 343
L + VIR +L +HYR +DFT + L A ++
Sbjct: 291 LSRHE-------PMVIRFYLLQSHYRSVLDFTEEGLEAARRGYTRLLDAYREARRRLERE 343
Query: 344 -----------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------LL 382
++ A+ +DL T AI A E K +
Sbjct: 344 PEGEHPGLEAALDRLEAEFTEAMNDDLGTPEAIAAFFTFLPELNKALAGRVGKRTLERAV 403
Query: 383 PIFNASAH-ILGIEVCKEHLNKNISIAIEKLVQERLILL-----------------KMKK 424
+F+ +LG+ + +++ R+ + +
Sbjct: 404 RVFHEFGEGVLGLFPPR-------------VLEARVGGRLLSGLVELLLELREEARRERD 450
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
F+ AD +R +L G I+ED
Sbjct: 451 FARADAVRARLAELGVIVEDTPQGPKW 477
>gi|223040210|ref|ZP_03610489.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
gi|222878571|gb|EEF13673.1| cysteinyl-tRNA synthetase [Campylobacter rectus RM3267]
Length = 462
Score = 318 bits (816), Expect = 8e-85, Method: Composition-based stats.
Identities = 155/481 (32%), Positives = 232/481 (48%), Gaps = 52/481 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+++++RK EF+ + +R+YVCGPTVYD AH+G+A+ I FDVL R L
Sbjct: 1 MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDVLRRTLSELGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN TDIDDKI+++ + +++ IT + + +D + L L P +P+
Sbjct: 59 KVKFVRNYTDIDDKILKKMSESG------ESLKSITDRYIASYERDMSALNVLEPDVKPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + +MI I+ ++ +G AYE + I FDT+ Y S S + E +
Sbjct: 113 ATQTLKEMIEYIEILLKNGFAYEIKGDGIYFDTAKDAQYLSLSGKFDTEANVARVASSDE 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGGLD 239
KK+ DF+LWK E +ESP+GRGRPGWH EC AM +L DIH GGLD
Sbjct: 173 -KKDEKDFVLWKF---DEKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ CA + A W+HNGF+ + KMSKS GN + + LE
Sbjct: 229 LLFPHHENEAAQCRCA-ERKSLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALERNL--- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP 349
+R ++ +HYR +F+ L A+ L K +
Sbjct: 285 ----GEAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANEKFKS 340
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIEVCK 398
+SA+ +DLNT A+ ++ + R + K + A +LGI
Sbjct: 341 EFMSAMQDDLNTSKALASVDEFVRSANDELDANPKDKAKKGKIAANLELIARVLGILQID 400
Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E+ +S IE L+ +R K + +D IR L + G L D +
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMDTPEGCIWE 460
Query: 453 R 453
+
Sbjct: 461 K 461
>gi|187251570|ref|YP_001876052.1| cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
gi|186971730|gb|ACC98715.1| Cysteinyl-tRNA synthetase [Elusimicrobium minutum Pei191]
Length = 460
Score = 318 bits (816), Expect = 9e-85, Method: Composition-based stats.
Identities = 148/474 (31%), Positives = 228/474 (48%), Gaps = 42/474 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L ++ + I+ MY CGPTVY++AHIGN R I D+L R LR E
Sbjct: 1 MQLYNSLTKEKEKIVPINVDYATMYACGPTVYNYAHIGNLRTYIFEDILVRALRL---EM 57
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V N+TD+ DDK+ A +E S I ++F +D L
Sbjct: 58 PVKHVMNVTDVGHLTSDGDSGDDKMELGAAREGKSA------WDIAKFYEKKFFEDFDSL 111
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR-RKIDEQ 173
C+ P+ RAT HI +MI L+ + G Y+ ++ I +DTS +Y I
Sbjct: 112 NCVRPSVISRATEHIKEMIELVSILEQKGFTYKTSDGIYYDTSKFSHYHDLVGASHISGL 171
Query: 174 KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
K G RV K+NP+DF LWK + + W+SPWG G PGWHIECSAM+ YLG
Sbjct: 172 KSGARVEFNTEKRNPSDFALWKFSPKDKKRQMEWDSPWGTGFPGWHIECSAMAMKYLGPT 231
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIH GG+D + HH NEIAQS A ++ W+H FL L KMSKS+G F+T++
Sbjct: 232 IDIHCGGIDHVAIHHTNEIAQSEAATG-KQYVRYWVHGEFLVLHAGKMSKSDGTFLTLDA 290
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR--LTEAEILLSKWPQTSTSKGIID 348
L E + + R L HYR ++FT + +A + + + G++D
Sbjct: 291 LKE------KGYKPLDYRYLCLGAHYRTQLEFTFESLDFAKASLKGLRDRAKALKDGVVD 344
Query: 349 PAVLSAL--------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK-- 398
A + +DLNT + + + + + + + + +++ K
Sbjct: 345 EAQVEEFKAKFAAALKDDLNTSKGLAVIWETLKSNAADGTKKEFLKYTEFVFALDLFKVE 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ I ++ L+ ER K K F +D +R ++ + GFI++D +
Sbjct: 405 KEAGVEIPAEVQSLLDERANARKEKDFKKSDELRDKINTLGFIVKDTPQGQKLE 458
>gi|308275277|emb|CBX31873.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 413
Score = 318 bits (816), Expect = 1e-84, Method: Composition-based stats.
Identities = 170/422 (40%), Positives = 223/422 (52%), Gaps = 45/422 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNT+ERK F+ + P + MYVCGPTVYD HIG+AR +IVFDV+ + L
Sbjct: 1 MSLRIYNTIERKKVPFEPVQPGKVSMYVCGPTVYDSCHIGHARSVIVFDVILKYLNATGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTYVRN TD+DDKII RA Q + + ++F +D L T +
Sbjct: 61 E--VTYVRNFTDVDDKIINRAVQLGIES------HEVAERYIKEFYEDMDALNIKRATIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI ++I LI+ ++ AY + +I + +YG S RK+++ + G RV
Sbjct: 113 PKATEHIDKIIALIEILLKKEIAYRIDGDIYYSVDKFKDYGKLSGRKLEDMEAGARVEID 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF LWK P EP WESPWGRGRPGWHIECSAMSS YLG+ FDIHGGG DLIF
Sbjct: 173 ERKNNPFDFALWKSQKPGEPYWESPWGRGRPGWHIECSAMSSAYLGETFDIHGGGKDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+HNGF+N+ KMSKS GNF+ I ++L +S+
Sbjct: 233 PHHENEIAQSEGAF-EKPFAKYWVHNGFVNINHEKMSKSLGNFLLIKDIL-------KSY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
+RL +L HYR PIDFT + + E+E L K I
Sbjct: 285 HPDSVRLFLLSNHYRSPIDFTDKAMEESEAALDKIYSAIQRVEEIADITGKDFINYPEGY 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNASAHILG 393
++ +D NT I L R + D + ++G
Sbjct: 345 WEKFCESMDDDFNTAKGIGYLFDSVRHINRLLDENSNSDEIKTIINSIYADIRKMGDVIG 404
Query: 394 IE 395
I
Sbjct: 405 IL 406
>gi|3122878|sp|O07045|SYC_AZOBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 448
Score = 318 bits (815), Expect = 1e-84, Method: Composition-based stats.
Identities = 173/479 (36%), Positives = 224/479 (46%), Gaps = 54/479 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ + P + MYVCGPTVYD AHIGNARP +VFD+L+
Sbjct: 1 MPLDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLF--RLLRRL 57
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNIT DDKII+R + A + PT +
Sbjct: 58 YPAVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRHGPLNAA--------PTIE 109
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+HI M+ LI +I + G SRR +DE G RV
Sbjct: 110 PRATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVA 169
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++ +DF+LWK ST +PGW+SPWGRGRPGWHIECSAM+ +LG FDIHGGGLDLI
Sbjct: 170 PYKRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIL 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHN-GFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
P HENEIAQS CA E A W+H R+MSKS GN LL
Sbjct: 230 PDHENEIAQSRCAHAGEPLARYWVHQRLRDRRGARRMSKSLGN------LLHRGTSCWTE 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSALY 356
+P L + R + E++ L +W Q + VL+AL
Sbjct: 284 FPGGGHPLGV-----RPYRSRGLPEAEESKATLDRWYQALRGDPAPAQAELPFDVLAALE 338
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI----------------LGIEVCKEH 400
+DLN+ AI LH+LA K A LG E
Sbjct: 339 DDLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLG----AEG 394
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I++ +++R K K ++ AD IRK+L G +LED G + T WK+
Sbjct: 395 AAALSDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447
>gi|15228880|ref|NP_191189.1| tRNA synthetase class I (C) family protein [Arabidopsis thaliana]
gi|7572928|emb|CAB87429.1| cysteine-tRNA ligase [Arabidopsis thaliana]
gi|332645985|gb|AEE79506.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 489
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 151/482 (31%), Positives = 231/482 (47%), Gaps = 60/482 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + +YNT+ + ++ ++P I +YVCG T YD++HIG+AR + FD+LYR LR+
Sbjct: 8 KPDLTLYNTMTQLKEVYKPMNPGKIGIYVCGITAYDYSHIGHARAAVSFDLLYRYLRHLG 67
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYVRN TD+DDK + + ++++ ++++ D L CL PTH
Sbjct: 68 YQ--VTYVRNFTDVDDK----------AKNCGEKPLDLSNRFCEEYLLDMAALQCLLPTH 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
QPR ++H+ Q+I +I+ II +G Y ++ F P+YG S +++D + G RV
Sbjct: 116 QPRVSDHMEQIIKMIEKIIENGCGYAVGGDVFFSVDKSPSYGQLSGQRLDHTQAGKRVAV 175
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NPADF L K + EP WESPWG GRPGWHIE FDIHGGG DL
Sbjct: 176 DSRKRNPADFALRKAAKSGEPSWESPWGHGRPGWHIE------------FDIHGGGADLK 223
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQ+C A + N W+HNG + KM KS NF TI ++ +
Sbjct: 224 FPHHENEIAQTCAAC-EDSGVNYWLHNGHVTNNNVKMGKSLNNFFTIRQI-------AAN 275
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPAV 351
+ +R ++ YR P++++V +L + L +
Sbjct: 276 YHPLALRHFLMSAQYRSPLNYSVSQLESSSDALYSLSPYREEMSGDVGKTQQSAEAKEMI 335
Query: 352 LSALYNDLNTVSAIQALHKLARE-----STKNHDLLPIFNASAHILGI-------EVCKE 399
+I L K+ ++ ++ +LG+ E+ K+
Sbjct: 336 KKVKNALKFINVSISKLKKMQKKQRMSLVVSLVEVEKAVREVLDVLGLLTTLSYGELLKD 395
Query: 400 HLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
K + + + ++ER + K K F +D IR+ L KG LED +
Sbjct: 396 MKQKALTRAGMGEEEVLQRIEERNMARKSKDFRRSDRIRELLAFKGIFLEDVPGDTVWRP 455
Query: 454 MT 455
T
Sbjct: 456 ST 457
>gi|33865235|ref|NP_896794.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|61216278|sp|Q7U8C0|SYC_SYNPX RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33638919|emb|CAE07216.1| cysteinyl-tRNA synthetase [Synechococcus sp. WH 8102]
Length = 493
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 163/529 (30%), Positives = 234/529 (44%), Gaps = 109/529 (20%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F + P +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLRLTNTLTRRTEPFTPLTPGKASIYCCGVTVYDLCHLGHARSYINWDVLRRFLIWRGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+N TDIDDKI++RA ++ N +++ ++ +N F +D L L P
Sbjct: 61 E--VTFVQNFTDIDDKILKRAAEQ------NSSMTEVSERNIDAFHQDMDALGILRPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
PRAT + + LI + G AY A+ ++ F YG S R + EQ+
Sbjct: 113 PRATQCLDGIRSLIGELEAKGAAYSADGDVYFAVMKHAGYGKLSGRDLSEQQDNAAGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGEGRPGWHIECSAMVRAELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A E A +W+HNG +N+ G+KMSKS GNF TI LLE+
Sbjct: 233 DLVFPHHENEIAQSEAATGKE-LARVWMHNGMVNVGGQKMSKSLGNFTTIRALLES---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+RL +L HYR+P+DFT + L A
Sbjct: 288 --GVSPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALGLGERYSDQLGWPSPAA 345
Query: 341 -------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
+ + ++ + ++ +DLN+ A+ L LA+ + L
Sbjct: 346 LSEDAIGPQTSPDAEALQALEQQFIGSMEDDLNSSGALAVLFDLAKPLRALANRLERGDE 405
Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIE----------------- 410
+ A +LG+ + +I+
Sbjct: 406 PGLPEADIRNLAPRWQLLRELAVVLGLRGETSGQSNMDDESIDATIAARKAAKAAKNYAE 465
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L ++G L D +T W +
Sbjct: 466 A-----------------DRIRNELTAQGIELIDKPGG-----ITEWIR 492
>gi|84498461|ref|ZP_00997231.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
gi|84381204|gb|EAP97088.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
Length = 465
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 150/473 (31%), Positives = 223/473 (47%), Gaps = 54/473 (11%)
Query: 16 TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
+F + P + +Y+CG T HIG+ R + FDVL R L V VRN+TD+
Sbjct: 2 RDFVPLQPGRVGIYICGLTTQAPPHIGHVRFAVAFDVLRRWL-VRGHGLDVALVRNVTDL 60
Query: 76 DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
DDKI+ ++ + + ++ +N + T L L PT++PRA HI +M+ L
Sbjct: 61 DDKILRKSAESG------EDWFALSYRNEVATSEALTLLGVLPPTYEPRAMGHITEMVEL 114
Query: 136 IQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
I+ +I +GHAY + + ++ FD S P YG + +KID+ + K++P DF
Sbjct: 115 IEVLIANGHAYAAEDGSGDVYFDVRSWPAYGEVTNQKIDDMAAAEDADPR-GKRDPRDFA 173
Query: 193 LWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
LWK EP W +PWGRGRPGWH+ECSAM+ YLG FDIHGGG+DL FPHHENE
Sbjct: 174 LWKGRKDGEPETASWPTPWGRGRPGWHLECSAMARKYLGDAFDIHGGGVDLRFPHHENEQ 233
Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
AQS A A++W+HN ++ + G KMSKS GN + I+E+ + +R
Sbjct: 234 AQSRAAG--LPFASLWMHNAWVTISGEKMSKSLGNSLLIHEVT-------KKARPLAVRY 284
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWP------------QTSTSKGIIDPAVLSALYN 357
+ HYR I+F L EAE + + T T + + A+ +
Sbjct: 285 YLTAAHYRSMIEFHEGSLAEAEAAVDRIEGFLRRALGPDSAVTPTGDEKLPVEFVEAMDD 344
Query: 358 DLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL------- 401
DL A+ A+H + D L + A ILG+
Sbjct: 345 DLGVSGALAAIHDTVTQGNTALDDGENDTARELAALVIAMTDILGVNPLDPAWAGADNSS 404
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + + + R + ++++D IR QL S G +ED
Sbjct: 405 SDAQSALDALVSERLAARTSARSARDYATSDAIRDQLISAGITIEDTPTGARW 457
>gi|33596886|ref|NP_884529.1| cysteinyl-tRNA synthetase [Bordetella parapertussis 12822]
gi|33573587|emb|CAE37581.1| cysteinyl-tRNA synthetase [Bordetella parapertussis]
Length = 551
Score = 318 bits (814), Expect = 1e-84, Method: Composition-based stats.
Identities = 152/419 (36%), Positives = 212/419 (50%), Gaps = 32/419 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F+ +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR
Sbjct: 67 MLHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASG-- 124
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L P +P
Sbjct: 125 LAVDYVRNITDIDDKIIRRAVETG------RRIGEVTEYYIAAMHADERALGVQPPDREP 178
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + G AY + ++ + +YG S + +D+ + G RV
Sbjct: 179 RATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVG 238
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 239 SAKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPD 298
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK---- 295
L FPHHENEIAQ+ A AN+W+H G L ++ KMSKS GNF TI + +
Sbjct: 299 LKFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSD 357
Query: 296 ---KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
++ A ++R ++ HYR P ++ L +A+ L + Q
Sbjct: 358 TQAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVD 417
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKE 399
A +A+ +D N+ A+ AL +LA E+ + A +LG+
Sbjct: 418 WSEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDP 476
>gi|193083780|gb|ACF09463.1| cysteinyl-tRNA synthetase [uncultured marine crenarchaeote
KM3-47-D6]
Length = 462
Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats.
Identities = 177/476 (37%), Positives = 242/476 (50%), Gaps = 48/476 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I++TL TE + D + +Y+CG TVYD AHIG+AR +IVFDVL R L
Sbjct: 1 MQIFDTLRNMKTELEFSD--KVGIYLCGVTVYDDAHIGHARTIIVFDVLRRFLESEG--I 56
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII+RA QE S + +K T+ + D L T P+
Sbjct: 57 TVEFVQNFTDVDDKIIDRANQEKIS------PLELAAKYTKNYFDDFDGLNVKRATVYPK 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
A HI M LI +++ +AY N + F S YG S++KID+ G RV
Sbjct: 111 AIEHIEDMQNLISSLVDKKYAYVTKNGVYFSVSKFTEYGKLSKKKIDDLISGARVSVDEE 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DF LWK + EP W+SPWG+GRPGWHIECSAMS YLG+ F+IHGGG DLIFPH
Sbjct: 171 KNNPIDFALWK-FSESEPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS + A IW+H G + + G KMSKS GN ++N +L+ +W
Sbjct: 230 HENEIAQSESFIPNQ-FAKIWMHVGMITINGEKMSKSLGNVKSVNHVLD-------NWGP 281
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------GIID 348
+IRL L Y +PID++ + L E L +
Sbjct: 282 NIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGVGDEIIAEKLVKECR 341
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVC 397
SAL NDLNT A+ +KL RE +L F + ILG ++
Sbjct: 342 EKFDSALNNDLNTPLALTTFYKLIREVNSLAAEEKITQTSAEIILQEFERMSEILGFQIL 401
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
K ++ I +++++R K + AD IR ++ K I D+KN +
Sbjct: 402 K--VSDAEKNEINQMIKKRDEYRMKKNYEQADNIRAEIAEKNVIFVDHKNKTTWVK 455
>gi|307579311|gb|ADN63280.1| cysteinyl-tRNA synthetase [Xylella fastidiosa subsp. fastidiosa
GB514]
Length = 442
Score = 318 bits (814), Expect = 2e-84, Method: Composition-based stats.
Identities = 177/461 (38%), Positives = 249/461 (54%), Gaps = 49/461 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNAR +VF VL LLR YG + Y RNITD+DDKI A+++
Sbjct: 1 MYVCGPTVYNYVHIGNARGPVVFGVLAALLRRRYG--ALRYARNITDVDDKINTAAQEQG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
IS IT + + +D +L P +P AT H+PQ+I +I+ +I HAY
Sbjct: 59 V------PISAITERFCAAYREDMKKLGVEPPDIEPEATAHMPQIIAMIEQLIERQHAYV 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
A ++F +S +YG SRR +E G RV +K++P+DF+LWK S+ PGW+SP
Sbjct: 113 AMEHVLFAVNSFADYGQLSRRDTEEMLAGARVEIAPYKRDPSDFVLWKPSSDQLPGWDSP 172
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WGRGRPGWHIECSAM++ +LG+ DIH GG+DL FPHHENEIAQS CA A +W+H
Sbjct: 173 WGRGRPGWHIECSAMAAAHLGETIDIHAGGIDLQFPHHENEIAQSRCAHGSSTFARVWMH 232
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NG LN EG KMSKS GN T++EL+ P +R A+L HYR+P+D++ +
Sbjct: 233 NGMLNFEGAKMSKSLGNIETVHELVA-------KHPPEALRYALLSAHYRKPLDWSEALI 285
Query: 328 TEAEILLSKWPQTSTSKGIIDPAVL------SALYNDLNTVSAIQALHKLARES------ 375
++ L++ T + +AL +DLNT A+ L LA E+
Sbjct: 286 AQSVRTLNRLYGTLRDLAAYPARAIIPGNIEAALDDDLNTPQALAELATLANEARIQLAD 345
Query: 376 TKNHDLLPIFNASAHILGIE----------------VCKEHLNKNISIAIEKLVQERLIL 419
T +H + A + + N++ I+ L+ R
Sbjct: 346 TTHHAAAEVTTALTRLKAKLLGAGLALGLLQQTPEAWFSQGTNESDETHIQALIDARGAA 405
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + F AD IR QL ++G +LED + RW ++
Sbjct: 406 KQARDFVRADAIRAQLAAEGIVLEDT------PQGVRWMKQ 440
>gi|254779493|ref|YP_003057598.1| cysteinyl-tRNA synthetase [Helicobacter pylori B38]
gi|254001404|emb|CAX29397.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysRS)
[Helicobacter pylori B38]
Length = 465
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 149/487 (30%), Positives = 233/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VMLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S + + ++
Sbjct: 113 ASEYLDAMVCMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE- 171
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH GG
Sbjct: 172 -KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ C +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIESKIEERKRAKERKDFLKADSIREELLNHKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|167756028|ref|ZP_02428155.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
gi|237734013|ref|ZP_04564494.1| cysteinyl-tRNA synthetase [Mollicutes bacterium D7]
gi|167704020|gb|EDS18599.1| hypothetical protein CLORAM_01548 [Clostridium ramosum DSM 1402]
gi|229382839|gb|EEO32930.1| cysteinyl-tRNA synthetase [Coprobacillus sp. D7]
Length = 449
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 158/470 (33%), Positives = 225/470 (47%), Gaps = 50/470 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ +KI+NTL K EF+ + + +YVCGPTVY++ HIGN RPMIVFDVL R Y
Sbjct: 1 MEVMMKIFNTLTNKKEEFKPLREGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFEYL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VT+V N TD+DDKII+ A+ E + +T K + L L PT
Sbjct: 61 GY--KVTFVSNFTDVDDKIIKAAKAEGITE------KELTDKYIAAYEDVRRNLNLLFPT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+ PR TN + +I I N++ G+AYE + ++ F S I YG S KI++ G
Sbjct: 113 YAPRVTNTMDAIIKFIDNLVKSGYAYEVDGDVYFRVSKIDEYGQLSGIKIEDLVAGASER 172
Query: 181 EKYHKKNPA--DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH-YLGKVFDIHGGG 237
+ K DF LWK+ T ++SPW +GRPGWH EC M + + G DIHGGG
Sbjct: 173 IDENDKKEESTDFALWKK-TDEGIRFDSPWSKGRPGWHTECVVMINDIFEGGKIDIHGGG 231
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHENEIAQS A+ W+HN +N++ +KMSKS GN I +++
Sbjct: 232 QDLKFPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMVA---- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------T 342
V++ ML +HYR P++ T + L + ++K
Sbjct: 287 ---ELGCNVVKWFMLSSHYRNPLNLTEEVLNSVKKEVAKVDNVIKSVSLYLQVNHIANEN 343
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPI----FNASAHI 391
++ AL +DLNT A+ + ++ KN + I +
Sbjct: 344 YNKAAVDGMVGALEDDLNTSLALTKILDQVKKLNLAFRQKEKNDKAIAIEYQTLLKMTAV 403
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+G V + + I Q L + K F +AD +R QL KG I
Sbjct: 404 IGF-VFEPRKLNAAELEI---YQAWLEAKQNKDFETADKLRTQLIEKGII 449
>gi|307104948|gb|EFN53199.1| hypothetical protein CHLNCDRAFT_137034 [Chlorella variabilis]
Length = 606
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 177/555 (31%), Positives = 247/555 (44%), Gaps = 134/555 (24%)
Query: 3 KKIKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+++ ++NTL R+ F+ + + MYVCG TVYD++HIG+AR + FDV+YRLLR+
Sbjct: 72 RELLLHNTLTRQKEVFRPRADQGNRVSMYVCGVTVYDYSHIGHARAYVAFDVIYRLLRHL 131
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRN TD+DDKII RA + + + +F D L CL P
Sbjct: 132 GY--AVTYVRNFTDVDDKIIARAAAAG------EEPLALARRFIAEFHADMELLGCLPPD 183
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT +IP M+ +IQ II HGHAY ++ FD +S+P YG S R ++ + G RV
Sbjct: 184 LEPRATEYIPHMVAMIQRIIDHGHAYAVGGDVFFDVASLPGYGRLSGRSQEDNRAGERVA 243
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+ ADF LWK + P EP WESPWG GRPGWHIECSAM LG+V DIHGGG DL
Sbjct: 244 VDERKRGAADFALWKAAKPGEPTWESPWGPGRPGWHIECSAMIREVLGEVIDIHGGGRDL 303
Query: 241 IFPHHENEIAQSCCADRIEKT-------------------------ANIWIHNGFLNLEG 275
+FPHHENE+AQS A W+HNGF+N++
Sbjct: 304 VFPHHENELAQSRAASGACSCGHDHGAATASASASNGSGGGGQDEFVRYWLHNGFVNVDS 363
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
KMSKS GNF TI E++ + +R ++ T YR+PI++T + L EA +
Sbjct: 364 EKMSKSLGNFFTIREVVA-------QYHPRALRWFLVGTQYRQPINYTQRALEEASDRVF 416
Query: 336 KWPQTSTSKGIIDPAVLSALY------------------------------NDLNTVSAI 365
QT G + +D+NT AI
Sbjct: 417 YLYQTLADMGAVLDGGEEGQAALAAARQQLAAPAAAASGSGLLAEVQAALTDDVNTPLAI 476
Query: 366 QALHKLAREST----------------KNHDLLPIFNASAHILGIEVCKEHLNKNISIAI 409
A + + + +LG+ +
Sbjct: 477 AAFSAPLKSANDLVHTKKGKKQAGRLQALAECYAALETCLQLLGLWAEQPQ--------- 527
Query: 410 EKLVQERLILLKMKKFSSA----DY----------------------IRKQLESKGFILE 443
+ L++ R + LK A D +R +LE+ G ++
Sbjct: 528 DVLLELRQLALK-----RAGLGEDEIAAAIEERAAARAAKDYAAADVVRLRLEAAGILIM 582
Query: 444 DYKNPDNGQRMTRWK 458
D + T WK
Sbjct: 583 DT------PQGTTWK 591
>gi|167044639|gb|ABZ09311.1| putative tRNA synthetases class I (C) catalytic domain protein
[uncultured marine crenarchaeote HF4000_APKG7F19]
Length = 463
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 184/475 (38%), Positives = 246/475 (51%), Gaps = 48/475 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I++TL TE + D +R+Y+CG TVYD AHIG+AR +IVFDVL R L +
Sbjct: 1 MMQIFDTLGNTKTELKFSD--KVRIYLCGVTVYDDAHIGHARTIIVFDVLRRFLESQ--K 56
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TD+DDKIIERA QE S + +K T+ + D RL T P
Sbjct: 57 ILVEFVQNFTDVDDKIIERALQEKTS------PLELAAKYTKNYFDDFDRLNVKRATMYP 110
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT HI M LI N++ +AY N + F S YG S++K D+ G RV
Sbjct: 111 KATEHIEDMQNLISNLVDKKYAYITKNGVYFSVSKFTEYGKLSKKKTDDLISGARVAVDE 170
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K NP DF LWK + EP W+SPWG+GRPGWHIECSAMS YLG+ F+IHGGG DLIFP
Sbjct: 171 EKNNPIDFALWK-FSNSEPSWDSPWGKGRPGWHIECSAMSLKYLGENFEIHGGGRDLIFP 229
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + IW+H G + + G KMSKS GN ++N +LE +W
Sbjct: 230 HHENEIAQSESFMSNQ-FTKIWMHVGMITINGEKMSKSLGNVKSVNHVLE-------NWG 281
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----------------GII 347
+IRL L Y +PID++ + L E L +
Sbjct: 282 PNIIRLFCLSGSYSKPIDYSEKFLKENITKLRQIESCYYELRLAEGTDEETIAEKLVKEC 341
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
SAL NDLNT A+ A +KL RE +LP F + ILGI++
Sbjct: 342 RDEFDSALNNDLNTPLALTAFYKLIREVNSLAAEEKITQTSAEIVLPEFERMSGILGIQI 401
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ I +++++R K + AD IR ++ K I D+KN
Sbjct: 402 LK--VSDAEKNEINQMIKKRDEYRMQKNYEQADSIRAKIAEKNIIFFDHKNKTTW 454
>gi|16082163|ref|NP_394604.1| cysteinyl-tRNA synthetase [Thermoplasma acidophilum DSM 1728]
gi|21264025|sp|Q9HJ27|SYC_THEAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|10640458|emb|CAC12272.1| probable cysteinyl-tRNA synthetase [Thermoplasma acidophilum]
Length = 452
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 159/469 (33%), Positives = 239/469 (50%), Gaps = 40/469 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ YNTL R + EF+ ++ I M+VCGPTV D HIG+AR I FD + +LLR
Sbjct: 1 MRFYNTLTRDVDEFKEMNSGRINMFVCGPTVQDHFHIGHARTYIFFDAVAKLLRNLGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII +AR+ +N + ++F++D + L + + +
Sbjct: 59 SVFYLQNITDIDDKIINKARE------MNIQPQDVADMYLREFLEDMSALKVTSVNYFAK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+T +I ++I I +I G+AYE ++ + F+ S +YG S + +D+ G RV +
Sbjct: 113 STLYINEIISQISRLIEKGYAYETSDGVYFEVSKFADYGQLSNQSLDQIIHGYRVAVNEN 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ P EP W+SPWG GRPGWHIE +A++ Y G +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKRKPGEPYWDSPWGPGRPGWHIEDTAITETYFGPEYDIHGGGSDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ + ++ WIH G +N+ KMSKS NF+TI E+L + +
Sbjct: 233 HEAEIAQMRAISGRKYLSHYWIHTGMINVNNEKMSKSLKNFVTIREVL-------KEYRP 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------GIIDPAV 351
+R A+L +YR +DF+ L E+ + T + +
Sbjct: 286 EDLRYALLNANYRTQLDFSKGLLEESRKQVEYLNSTFRKLVNASGNSDLSADPSAVIKRM 345
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN 402
+ ND + S + L A + KN + + +F GI + +
Sbjct: 346 VDEATNDFDFRSVFRDLIDFAGDLNKNIESISRPAAQKAIDVFRWVDSFAGILLPE---T 402
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+S I+ L+ R L +KF AD IR L G +ED +
Sbjct: 403 ARLSGIIDDLLDLRKNLRTERKFQEADRIRDLLLKNGIHVEDRGDETIW 451
>gi|311897431|dbj|BAJ29839.1| putative cysteinyl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 461
Score = 317 bits (813), Expect = 2e-84, Method: Composition-based stats.
Identities = 152/475 (32%), Positives = 231/475 (48%), Gaps = 43/475 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+++NTL ++ EF + P +RM+VCGPTVY +H+G+A+ FD++ R L+
Sbjct: 1 MAIRLHNTLTKRKEEFVTMTPGVVRMFVCGPTVYGLSHVGHAKTYTQFDLVARYLKKRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY +N+TD+DDKII RA + + ++ + ++ D L
Sbjct: 61 Q--VTYAQNLTDVDDKIIRRANELGMD------PRDLATEYEKHYLDDMAALHNTNVDVF 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK-MGTRVPE 181
RA +HI +++ +Q +I GHAY ++ +D ++ P YG S R + + RV E
Sbjct: 113 GRAHDHIDEIVAQVQQLIERGHAYRLDDGWYYDLTTFPGYGKLSGRTEVKAEDSLARVDE 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+NP DF LWK P EP W + G GRPGWHIE +A++ G +D+HGG +DLI
Sbjct: 173 NDQKRNPGDFALWKARKPGEPYWATALGEGRPGWHIEDTAITEALFGPQYDLHGGAVDLI 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE EIAQ A ++ A W+H G L ++G KMSKS GNF+TI ++L+T F
Sbjct: 233 FPHHEAEIAQMEAASGLDPLARYWMHTGLLRVDGAKMSKSTGNFLTIRDILKTADF---- 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------II 347
+R A L HYR ++ L +A + +
Sbjct: 289 ---RTLRYAFLSQHYRSSMELNDTTLEQARAARRRVENFARLIDRNHEDSPASAALARNA 345
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----LLPIFNASAHILGIEVCKEHLN 402
A+ L +DL+T A+ L RE + + L + + +
Sbjct: 346 REAIFERLDDDLDTPGALAVLFDYIREQNRREEPPGTAALALLRELDELF--DAFDLDDR 403
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
IE L+ R L + ++F AD IRK L +G ++ED + TRW
Sbjct: 404 TTDDAEIEALLARRRELRQARRFEEADEIRKTLHQRGIVIEDTPD------TTRW 452
>gi|296274353|ref|YP_003656984.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296098527|gb|ADG94477.1| cysteinyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 467
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 157/481 (32%), Positives = 249/481 (51%), Gaps = 48/481 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
KI IY++++++ F+ I + ++YVCGPTVYD +H+G+AR I FD+L+R+L+
Sbjct: 3 KIFIYDSVKKEKVLFEPIVENQAKIYVCGPTVYDDSHLGHARSAIAFDMLHRVLKANG-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT +N TDIDDKII++ + S+ IT++ + D L L T +P
Sbjct: 61 LNVTMTKNFTDIDDKIIKKMNESSRSLE------DITTQYINAYKADMHSLNILDNTLEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT ++ MI +I ++I AY ++ + FD S +YG+ S+ + ++ RV
Sbjct: 115 KATQNLEAMIEMINDLISKDIAYIIDDGVYFDVSKDNSYGNISK-RASDENSIARVEVNT 173
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGL 238
K+N +DF LWK + +E+ +G+GRPGWHIECSAM + DIHGGG
Sbjct: 174 QKRNSSDFALWKFEKANDVSYEASFGKGRPGWHIECSAMIQKHLAYKDKDYQIDIHGGGA 233
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ+ C+ E A W+HNGF+ ++G KMSKS GN + ++L
Sbjct: 234 DLLFPHHENEAAQTRCSSHKE-LAKYWMHNGFVTIDGEKMSKSLGNSFFLKDIL------ 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDP 349
+S+ V+R +L HYR +F + L ++ L K+ +
Sbjct: 287 -KSYSGEVVRFYLLTAHYRTDFNFNEEDLISSKKRLDKYYRVKKRVYGSAASAANSEFKA 345
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
VL+AL +D+N+ AI + + + D L+ F ILGI
Sbjct: 346 KVLNALNDDINSSKAISIIDDMINNANDKLDKNPKDKNLKKELIANFEFINEILGICFND 405
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + +N++ IE+L+ +R K K F++AD +R +L + G + D N +
Sbjct: 406 AYEYFQFGINEDTKNKIEELINKRTEAKKQKDFATADSVRDELIALGISVMDTPNGVVWE 465
Query: 453 R 453
+
Sbjct: 466 K 466
>gi|29290062|gb|AAO72326.1| cysteinyl tRNA synthetase [synthetic construct]
Length = 465
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 232/487 (47%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE Q+ C +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEACQTRCTFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDP 349
+++ ++R +L HYR ++F + L ++ L K +
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCK 398
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 343 EILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKD 402
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+++ IE ++ER + K F AD IR++L + L D
Sbjct: 403 PSAYFQLGVSESEKQEIENKIEERKRAKEQKIFLKADSIREELLKQKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTIWEK 463
>gi|326773069|ref|ZP_08232353.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
gi|326637701|gb|EGE38603.1| cysteine--tRNA ligase [Actinomyces viscosus C505]
Length = 530
Score = 317 bits (812), Expect = 2e-84, Method: Composition-based stats.
Identities = 158/514 (30%), Positives = 241/514 (46%), Gaps = 82/514 (15%)
Query: 5 IKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y++ R I P + +Y+CG TV HIG+ R I FDVL R L E
Sbjct: 29 LRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERCGQE 88
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +RN+TDIDDKI+ ++ P +P + ++F L APT++P
Sbjct: 89 --VRLIRNVTDIDDKILSKSAAAEPPVP----WWAWAQRFEREFDAAYRALGVDAPTYEP 142
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDE-----QKMGT 177
RAT HIP+MI L+Q ++ GHAY + + +D S+P YGS + +++++ +
Sbjct: 143 RATGHIPEMIDLVQRLLDAGHAYVGESGNVYYDVRSLPGYGSLTNQRLEDLATTEDESQL 202
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECSAMS YLG+ FDIH
Sbjct: 203 DDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSAMSRRYLGETFDIH 262
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG+DL FPHHENE AQS A A W+HN ++ ++G KMSKS GN + + ELL
Sbjct: 263 GGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAELL-- 318
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------- 337
+ + A V+RLA+ H+R ++F+ + L +A L +
Sbjct: 319 -----KRYDAAVLRLALGTVHHRSTVEFSEETLADAAALWERLSGAILRAYEFCDGGDAN 373
Query: 338 ----PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------- 383
P + +A+ DLN A+ +H +
Sbjct: 374 PVDAPAEQVRARALPAEFTAAMDEDLNLAGAMAVIHATLKALNVALTQAAPSGGQGADDA 433
Query: 384 ----------IFNASAHILGIEVCKEHLNKNI---------SIAIEKL-------VQERL 417
+ +LG++ E + A+E L ++ER
Sbjct: 434 LRASVTGLALDLRSQLDVLGLDPLSEPWRTRVLDGAGSSQGGAAMEALDRLIRHDLEERA 493
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ AD +R +L G ++ED +
Sbjct: 494 QARAAKDWARADALRDKLTGAGVVVEDSPSGARW 527
>gi|291007003|ref|ZP_06564976.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 453
Score = 317 bits (811), Expect = 4e-84, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 223/466 (47%), Gaps = 47/466 (10%)
Query: 16 TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
EF +YVCG TV HIG+ R + +DVL R L + + V VRN+TDI
Sbjct: 2 REFHPRLAGVASIYVCGATVQGVPHIGHVRGGLNYDVLRRWLVHNGYD--VRLVRNVTDI 59
Query: 76 DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
DDKI+ +A + + + F RL CL P+ PRAT HI QMI L
Sbjct: 60 DDKILTKAADAG------RPWWEWATAHERAFESAFDRLGCLPPSALPRATGHITQMIEL 113
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+Q +I GHAY A ++ F +S + + + ++ K++P DF LWK
Sbjct: 114 MQRLIDKGHAYAAGGDVYFSVASYAEHYGRLSGQRLD-EVQQGESTASGKRDPRDFTLWK 172
Query: 196 RSTPMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
+ P EP W +PWG GRPGWH+ECSAMS++YLG FDIHGGGLDL+FPHHENE+AQS
Sbjct: 173 AAKPGEPSWPTPWGAAGRPGWHLECSAMSTYYLGSEFDIHGGGLDLVFPHHENELAQSTA 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A A W+HN ++ + G KMSKS GN + I +L+ AP IR ++
Sbjct: 233 AGDG--FARYWMHNAWVTMSGEKMSKSLGNTVAIPAILQRAA-------APEIRYYLVAP 283
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAVLSALYNDLNTVSAI 365
HYR I+++ L EA + G + +A+ +DL+T AI
Sbjct: 284 HYRSTIEYSEPALAEAISAYRRIDSFVNRVRQRTGEVGHGTVPAEFAAAMDDDLSTPQAI 343
Query: 366 QALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK----------NIS 406
+H RES D ILG++ E +S
Sbjct: 344 AVVHNAIRESNAALDRGDDRAANEAAASVRTMTDILGLDPLSEQWADTRGADDAAHHALS 403
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++Q+R + F++AD +R +L++ G +ED +
Sbjct: 404 ELVGSMLQQRQQARAERDFATADAVRDRLQACGIAVEDTPDGPLWT 449
>gi|254459132|ref|ZP_05072554.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
gi|207084025|gb|EDZ61315.1| cysteinyl-tRNA synthetase [Campylobacterales bacterium GD 1]
Length = 466
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 165/482 (34%), Positives = 238/482 (49%), Gaps = 48/482 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+++++ EF + +YVCGPTVYD +H+G+A+ +VFD+L R+L+ +
Sbjct: 1 MYIYDSVQKTKREFTPLVEGKASLYVCGPTVYDDSHLGHAKSALVFDLLSRVLKANGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY RNITDIDDKII++A + I IT T F K+ + P +P+
Sbjct: 60 -VTYARNITDIDDKIIKKAAESGKD------IKEITDFYTDAFHKEMDAIGVSRPDIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + M LIQ +I GHAY+ +I FDTSS Y S S R DE RV
Sbjct: 113 ATESLDAMYELIQKLIDSGHAYKTSEGDIYFDTSSDGEYLSLSSRVQDEDDKLQRVENSL 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
K+NPADF LWK + SP+G GRPGWH+ECSAM +L DIHGGG
Sbjct: 173 QKRNPADFALWKSVKDNTITFNSPFGEGRPGWHLECSAMIEKHLAHEGAEFAVDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ+ CA AN W+HNGF+N++G KMSKS GN + + L
Sbjct: 233 DLLFPHHENEAAQTRCATN-HALANYWMHNGFVNIDGEKMSKSLGNSFFLKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDP 349
+ + V+R +L THYR +F Q L ++ L K + T
Sbjct: 286 -KEYDGEVLRFYLLSTHYRSNFNFNTQDLATSKKRLDKIYRLKKRLFGLADCTDATPFKE 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHILGI---- 394
++L AL +D+N SA+ + + + D ILG
Sbjct: 345 SLLKALSDDMNVSSALALIEAFISSTNEVLDTAGKHKELKRETISNLAYIEKILGFGSKN 404
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + ++ + + I L+ +R K K F +D +R ++ + G + D +
Sbjct: 405 AYEYFQFGVDAHTKLQIFDLIVKRDEAKKEKNFQESDKLRDEILAFGVNIMDTPQGTFWE 464
Query: 453 RM 454
++
Sbjct: 465 KV 466
>gi|315654539|ref|ZP_07907445.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
gi|315491003|gb|EFU80622.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
Length = 506
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+++ ++ +F + P + +Y+CGPTV H+G+ R + FDVL R LR
Sbjct: 1 MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI+ ++ + + ++F L L PT P
Sbjct: 59 AVTYVRNVTDIDDKILAKSAAAGV------PWWELAAHFEREFDFAYRALNTLPPTVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I LI+ ++ GHAY + N + F +S+P+YG+ + + + E +
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELVSTEDESQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 TATEVGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE+AQS A A W+HN +L L+G KMSKS GN + + LLE
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
W V+R++++ THYR ++++ L +A +L K+
Sbjct: 290 ------WNPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAGAGAP 343
Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
Q + + ++AL +DLN A+ ALH+ + +
Sbjct: 344 EVCNIYGDVEPDLARQRELTAVELPDDFVAALDDDLNVPGALPALHRALKTGKAALNSGD 403
Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
++ A + G++ N +++ + L+Q
Sbjct: 404 TSGAQQAALQLRAMLDVFGLDPHDPAWVASVSATETPGTAPSPTDTPNDSLTSLVTALLQ 463
Query: 415 ERLILLKMKKFSSADYIRKQL 435
+R + + AD IR L
Sbjct: 464 QRAEAKAQRDWGRADAIRDLL 484
>gi|291456071|ref|ZP_06595461.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
gi|291382480|gb|EFE89998.1| cysteine--tRNA ligase [Bifidobacterium breve DSM 20213]
Length = 549
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 151/542 (27%), Positives = 225/542 (41%), Gaps = 109/542 (20%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+T +++ F + P + +YVCG TV HIG+ R + FD++ R
Sbjct: 31 LNLYDTASHQVSHFVPLKPGEVGIYVCGATVQSSPHIGHIRAAVAFDIVRRWFLKLGY-- 88
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT +PR
Sbjct: 89 KVTFVRNVTDIDDKILDKAA------TAGQRWWARAYYYEREFTEAYNTLGVLPPTVEPR 142
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG- 176
AT H+ MI LIQ I+ +GH Y + + FD +S P+YG + +K +
Sbjct: 143 ATGHMSDMIDLIQRILDNGHGYVVTDADGKPTGNVYFDVASWPHYGELTHQKQTAEVDEA 202
Query: 177 ----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRG 211
K +P DF LWK +P W +P+G G
Sbjct: 203 AAVADRMGPSVDATGDDKYNPVDPADASPDKHDPRDFALWKAPKDTDPEDARWSTPFGVG 262
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL 271
RPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A +A W+H+ ++
Sbjct: 263 RPGWHIECSAMSHRYLGDGFDIHGGGLDLRFPHHENEMAQTRAAGY--PSAARWMHSAWV 320
Query: 272 NLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 321 TAKGEKMSKSLGTGLSVPSVLAEN-------SAWVVRYALGSVQYRSMLEWSDQALVEAQ 373
Query: 332 ILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ G + ++A+ +D+N A A+ R
Sbjct: 374 AAYDRVSNFIERAGVALGGQPSREEVTGISADDLPTDFVAAMNDDVNVSGATAAIFTTIR 433
Query: 374 ESTKNHDLLP-----------------IFNASAHILGIEVCKEHL--------------- 401
L A LG++ E
Sbjct: 434 SGNTLLSQLADRADSEAVQAEVRETLLAVRAMLDTLGLDPLAEPWVSAGAAGGASDGTTE 493
Query: 402 ---NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ + I + + R K + F+ AD IR L G +ED G + + W
Sbjct: 494 TPEHAALEALITEQLNARAEARKARDFAKADQIRDTLAEAGITIED------GLQGSTWS 547
Query: 459 QK 460
K
Sbjct: 548 LK 549
>gi|29840595|ref|NP_829701.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
gi|33301685|sp|Q821U7|SYC_CHLCV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|29834945|gb|AAP05579.1| cysteinyl-tRNA synthetase [Chlamydophila caviae GPIC]
Length = 476
Score = 316 bits (810), Expect = 4e-84, Method: Composition-based stats.
Identities = 158/486 (32%), Positives = 237/486 (48%), Gaps = 52/486 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+K+ +YNT+ R F + + +++Y CGPTVYD+AHIGN R + D+L R L +
Sbjct: 8 KQKLYLYNTVSRAKELFCSSNDP-VKLYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LF 64
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V ++ NITD+DDK + A N ++ T+ Q F +D L L
Sbjct: 65 FGYSVRHIMNITDVDDKTLAGA------CKKNISLDAYTAPYIQAFFEDVASLNILPADV 118
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
P AT++IPQMI I ++ G AY + + F P YG S+ K+ + + +RV
Sbjct: 119 YPHATHYIPQMIEAIAKLLDEGIAYVGQDSSVYFSIEKFPTYGKLSQLKLQDLQCCSRVS 178
Query: 181 EKYHKKNP-ADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K +DF+LWK WESP+G+GRPGWH+ECS M+ LG DIH G
Sbjct: 179 SDEYDKENLSDFVLWKAYEEKRDGHIYWESPFGKGRPGWHLECSIMAMELLGASIDIHAG 238
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D IFPHHENEIAQS + + W+H+ L ++G+KMSKS GNF T+ LL+
Sbjct: 239 GVDNIFPHHENEIAQSESLSH-QPFSRYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD--- 294
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------ 350
R + IR +L +HYR ++FT + L L + + + P
Sbjct: 295 ---RGFSGEEIRYMLLQSHYRMQLNFTEEGLLACRQALKRLRDFISRIESVYPESSHISE 351
Query: 351 ------------VLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
A+ NDLN +A+ AL ++ D +L I
Sbjct: 352 DMQQHGEGFLQAFSEAIANDLNIAAALAALFDFIHQTNSTIDQANFTQADANYVLDIMKR 411
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+LG+ L I +++LV+ER + K + AD +R Q+ S G+ +ED K+
Sbjct: 412 INTVLGVIPFSADL--EIPDHVKQLVEEREVARSEKNWKQADALRDQVASLGYSIEDAKS 469
Query: 448 PDNGQR 453
++
Sbjct: 470 GPKVKK 475
>gi|2181176|emb|CAA67901.1| cysteine tRNA synthetase [Azospirillum brasilense]
Length = 448
Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats.
Identities = 167/478 (34%), Positives = 220/478 (46%), Gaps = 52/478 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YNTL R+ F+ + P + MYVCGPTVYD AHIGNARP +VFD+L+
Sbjct: 1 MPLDLYNTLTRRKERFEPMTPDRVGMYVCGPTVYDTAHIGNARP-VVFDLLF--RLLRRL 57
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNIT DDKII+R + A + PT +
Sbjct: 58 YPAVTYVRNITASDDKIIDRRATTGADRGADQAHRGPLPRRHGPLNAA--------PTIE 109
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT+HI M+ LI +I + G SRR +DE G RV
Sbjct: 110 PRATHHISHMVALIGLLIEPATPTPRKGTCCSPCRRWRSTGQLSRRSLDEMIAGARVEVA 169
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K++ +DF+LWK ST +PGW+SPWGRGRPGWHIECSAM+ +LG FDIHGGGLDLI
Sbjct: 170 PYKRDSSDFVLWKPSTDGQPGWDSPWGRGRPGWHIECSAMAKEHLGVTFDIHGGGLDLIL 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
P HENEIAQS CA + NGF+ +EGR+ S +
Sbjct: 230 PDHENEIAQSRCAHAGSRWPATGSTNGFVTVEGREGCPSR-----WATFFTGGTSCWTEF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSALYN 357
P L + R + E++ L +W Q + VL+AL +
Sbjct: 285 PGGGHPLGV-----RPYRSRGLPEAEESKATLDRWYQALRGDPAPAQAELPFDVLAALED 339
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHI----------------LGIEVCKEHL 401
DLN+ AI LH+LA K A LG E
Sbjct: 340 DLNSPLAISHLHELASAVNKATGEAEKAAAKGRCRSAERWAAPETRSVVPLG----AEGA 395
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I++ +++R K K ++ AD IRK+L G +LED G + T WK+
Sbjct: 396 AALSDADIQQRIEDRSAARKAKNYAEADRIRKELADLGIVLED------GPQGTTWKR 447
>gi|224282426|ref|ZP_03645748.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
Length = 540
Score = 316 bits (810), Expect = 5e-84, Method: Composition-based stats.
Identities = 156/539 (28%), Positives = 229/539 (42%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + +YVCG TV HIG+ R + FDV+ R + +
Sbjct: 25 LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ- 83
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT++PR
Sbjct: 84 -VTFVRNVTDIDDKILDKAA------VAGQQWWARAYFYEREFTQAYDTLGVLPPTYEPR 136
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG- 176
AT H+ MI LI+ II +GH Y + + FD +S P+YG + +K +
Sbjct: 137 ATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEADE 196
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK P +P W +P+G
Sbjct: 197 AAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFGV 256
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A E A W+H+ +
Sbjct: 257 GRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAA-GYESAAR-WMHSAW 314
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 315 VTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEA 367
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + +SA+ +D+N A A+
Sbjct: 368 QAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTAI 427
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------- 402
R L A LG++ E
Sbjct: 428 RNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESRE 487
Query: 403 -KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I + + R K + F+ AD IR L + G +ED G + + W K
Sbjct: 488 HDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540
>gi|308235882|ref|ZP_07666619.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
gi|311115022|ref|YP_003986243.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|310946516|gb|ADP39220.1| cysteine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
Length = 529
Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats.
Identities = 156/529 (29%), Positives = 225/529 (42%), Gaps = 98/529 (18%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNT + F + P ++ MYVCG TV HIG+ R I FDV+ R L
Sbjct: 15 RLRLYNTATHNTSGFTTVTPGHVGMYVCGATVQSSPHIGHIRAAIAFDVVRRWLLRLGY- 73
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKII++A + ++F K L + PT +P
Sbjct: 74 -TVTFVRNVTDIDDKIIKKASENG------QTWWQRAYIYEREFTKAYNTLGVMPPTVEP 126
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M+ LIQ +I GHAY + F S +YG+ + + +
Sbjct: 127 RATGHINDMVELIQRLINRGHAYAITDANGNPTGNVYFSVPSWQDYGALTHQNGNSDGSN 186
Query: 177 --------------TRVPEKYHKKNPADFILWKRSTPM---EPGWESPWGRGRPGWHIEC 219
K + DF LWK + W +P+G GRPGWHIEC
Sbjct: 187 SDDKSSKADKYNPVDPADASPDKHDARDFALWKAPCDFDQKDARWNTPFGAGRPGWHIEC 246
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
SAMS YLG FDIHGGGLDL FPHHENE+AQ+ A K+AN+W+H+ ++ +G KMS
Sbjct: 247 SAMSHRYLGDSFDIHGGGLDLRFPHHENEMAQTLAAG--WKSANVWMHSAWVTSKGEKMS 304
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
KS GN +++ +L K A V+R A+ YR ++++ Q LTEA+ +
Sbjct: 305 KSLGNGLSVPSVLAQK-------SAWVVRYALGGVQYRAMLEWSDQSLTEAQSAYDRISN 357
Query: 340 T------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
S + A+ +D+N A+ A+ R D
Sbjct: 358 FLERANRVIENQPDYAEVQSVDADNLPKDFTKAMNDDINVSGALAAIFTAIRSGNALLDD 417
Query: 382 LP--------------------IFNASAHILGIEVCKEHLN------------------- 402
A LG++
Sbjct: 418 YAQNQNENQSNGIKSLIKTCVLQVRAMLDTLGLDPYSPQWRNLSQKSQDLGANNGASAEH 477
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K + I +++R I K F+ AD IR L + G ++ED +
Sbjct: 478 KVLESLIANQLEQRAIARAAKDFARADAIRDSLTAAGVVIEDCAQGSSW 526
>gi|300934657|ref|ZP_07149913.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
Length = 482
Score = 316 bits (809), Expect = 5e-84, Method: Composition-based stats.
Identities = 150/493 (30%), Positives = 239/493 (48%), Gaps = 64/493 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+T R++ +F+ + + +Y+CG TV HIG+ R + FD+L L+ +
Sbjct: 6 LRIYDTATRQLRDFEPVREGHASIYLCGATVQSIPHIGHVRSGVAFDILRNWLQAKGLD- 64
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN+TDIDDKI+ +A + + + + F +L P+ +PR
Sbjct: 65 -VAFVRNVTDIDDKILTKAAENG------RPWWEWAATHERAFSWAYDQLGVAPPSIEPR 117
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HIPQMI +Q II +GH Y A+ + ++I NYG S +K+DE G
Sbjct: 118 ATGHIPQMIEYMQRIIDNGHGYAADGNVYAQPATIQNYGFLSGQKLDEMDQGESAGTG-- 175
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF +WK + P EP W++PWGRGRPGWHIECSAM++ YLG FDIH GGLDL FPH
Sbjct: 176 KRDPRDFTMWKAAKPGEPAWDTPWGRGRPGWHIECSAMATTYLGGEFDIHCGGLDLQFPH 235
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ A ++ A W+HNG++ + G KMSKS GN ++I +L+ +
Sbjct: 236 HENEAAQATAAG--DRFARYWMHNGWVTMSGEKMSKSLGNVLSIPNVLKLVR-------P 286
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------STSKGI 346
+R + HYR ++++ L EA + + G
Sbjct: 287 VELRYYLGSGHYRSMLEYSETALGEAAAGYRRIEKFLLRTAASLSDSDATSLPEIIPTGE 346
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILG 393
+ A + + +DL A+ +H+ RE K + + A A +LG
Sbjct: 347 VTDAFAAKMDDDLAVPQALALIHERVREGNKLLEGKVDDAKRAQLQKIGGEVRAMAAVLG 406
Query: 394 IEVCKEHLNK--------------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
++ + + + + ++ + R K +++AD +R +L G
Sbjct: 407 VDPFSDTWLESTKAAAGGSDAAMGALDVLVKSELARRAEARAAKDWATADEVRDRLAESG 466
Query: 440 FILEDYKNPDNGQ 452
+ D +
Sbjct: 467 IEVTDTADGAKWA 479
>gi|120406286|ref|YP_956115.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|187629833|sp|A1TG09|SYC_MYCVP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119959104|gb|ABM16109.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 463
Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats.
Identities = 153/482 (31%), Positives = 226/482 (46%), Gaps = 62/482 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+TL + +F + P ++ +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 60 -VAFIRNVTDIDDKILHKAADAG------RPWWEWAATYERAFTAAYDALGVLPPSAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI QM+ LI+ +I GHAY + ++ F +++P+YG S +ID+ G V
Sbjct: 113 ATGHITQMVELIERLIERGHAYTGDGDVYFSVATLPDYGKLSGHRIDDVHQGEGVATG-- 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL+FPH
Sbjct: 171 KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCESYLGAAFDIHAGGMDLVFPH 230
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQ+ A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 231 HENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVRAAE----- 283
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAVLSAL 355
+R + HYR ++F+ L +A + G P +AL
Sbjct: 284 --LRYYLGSAHYRSMLEFSETALQDAAKAYAGIEDFLHRVRTRVGAVVPGEWTPKFGAAL 341
Query: 356 YNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNIS 406
+DL +A+ +H E + D A ILG + E
Sbjct: 342 DDDLAVPAALAEVHAARAEGNRALDAGDHDTALTHAMSIRAMMGILGADPLDERWESRDE 401
Query: 407 -----IAIEKLVQERLILLKMKK------------FSSADYIRKQLESKGFILEDYKNPD 449
A++ LVQ + ++ AD IR +L+ G + D +
Sbjct: 402 TSAALAAVDVLVQA--------EVQRREDARARRDWAEADAIRDRLKEAGIEVTDTADGP 453
Query: 450 NG 451
Sbjct: 454 QW 455
>gi|254430939|ref|ZP_05044642.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197625392|gb|EDY37951.1| cysteinyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 505
Score = 316 bits (809), Expect = 6e-84, Method: Composition-based stats.
Identities = 171/539 (31%), Positives = 233/539 (43%), Gaps = 115/539 (21%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL R+ F+ + P + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MTLRLTNTLTRRTEAFEPLQPGTVSIYCCGVTVYDLCHLGHARSYIAWDVLRRYLLWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V+N TDIDDKI+ RA +E S + ++++N Q F D RL L P
Sbjct: 61 --AVTFVQNYTDIDDKILRRAAEEGSS------MEAVSARNIQAFEADMARLNILPPDRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG----TR 178
PRAT + + LIQ + G AY A+ ++ F YG S R++ EQ+
Sbjct: 113 PRATRSLEAIRALIQELEARGAAYSADGDVYFAVMRHAGYGKLSGRELSEQQNNAAGRVA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + P EP + SPWG GRPGWHIECSAM LG DIH GG
Sbjct: 173 DAEEARKQHPFDFALWKGAKPGEPSFPSPWGPGRPGWHIECSAMVREELGDTIDIHLGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHENEIAQS A E A W+HNG +N+ G KMSKS GNF TI LL++
Sbjct: 233 DLIFPHHENEIAQSEAATGRE-LARYWLHNGMVNVGGEKMSKSLGNFTTIRGLLDS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+RL L HYR+P+DFT + L A S
Sbjct: 288 --GISPMTLRLFTLQAHYRKPLDFTAEALDAAAAGWSGLNAALGLNGGEDGSAGQEKATE 345
Query: 341 ----------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP- 383
+ ++A+ +DLNT +A+ L +LAR L
Sbjct: 346 PEAITAVPIATDPASLREELAALQRRFIAAMDDDLNTAAALAVLFELARPLRGLAHRLER 405
Query: 384 -------------------IFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMK- 423
+ A +LG+
Sbjct: 406 GDPAAAVEAGQPEIASRSRLLQELAAVLGLRHEPSAPP--------------QTAKGTGE 451
Query: 424 ----------------------KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
F+ AD IR +L ++G L D +T W ++
Sbjct: 452 GGATEERIAARIEARRAAKAARDFTEADRIRAELLAEGIELIDRPGG-----VTDWLRR 505
>gi|313139572|ref|ZP_07801765.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
gi|313132082|gb|EFR49699.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
Length = 550
Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats.
Identities = 156/539 (28%), Positives = 229/539 (42%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + +YVCG TV HIG+ R + FDV+ R + +
Sbjct: 35 LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ- 93
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++A ++F + L L PT++PR
Sbjct: 94 -VTFVRNVTDIDDKILDKAA------VAGQQWWARAYFYEREFTQAYDTLGVLPPTYEPR 146
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG- 176
AT H+ MI LI+ II +GH Y + + FD +S P+YG + +K +
Sbjct: 147 ATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEADE 206
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK P +P W +P+G
Sbjct: 207 AAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFGV 266
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A E A W+H+ +
Sbjct: 267 GRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAA-GYESAAR-WMHSAW 324
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 325 VTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEA 377
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + +SA+ +D+N A A+
Sbjct: 378 QAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTAI 437
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------- 402
R L A LG++ E
Sbjct: 438 RNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESRE 497
Query: 403 -KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I + + R K + F+ AD IR L + G +ED G + + W K
Sbjct: 498 HDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 550
>gi|319762811|ref|YP_004126748.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|330824891|ref|YP_004388194.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
gi|317117372|gb|ADU99860.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans BC]
gi|329310263|gb|AEB84678.1| cysteinyl-tRNA synthetase [Alicycliphilus denitrificans K601]
Length = 458
Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats.
Identities = 158/392 (40%), Positives = 218/392 (55%), Gaps = 30/392 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + +F ++ ++RMYVCG TVYD H+G+AR MI FDV+ R LR
Sbjct: 1 MSLRIYNTLSRALEDFSPLEAGHVRMYVCGMTVYDLCHLGHARSMIAFDVVQRWLRASG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + +D L PTH+
Sbjct: 60 -LAVTYVRNITDIDDKIIRRAVENG------ETIRSLTDRMIDALHEDADALGIERPTHE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ +I + G AY+ AN ++ + P YG S + +DE G RV
Sbjct: 113 PRATEYVPQMLSMIGTLQSRGLAYQAANGDVNYAVRKFPGYGRLSGKSLDELNAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K +P DF+LWK + P EP W+S +G GRPGWHIECSAM LG+ FDIHGGG
Sbjct: 173 QDGKLDPLDFVLWKGAKPEEPAEVKWQSAYGEGRPGWHIECSAMGCTLLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A +W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 233 DLAFPHHENEIAQSEGATG-KPFARVWMHNGFINVDNEKMSKSLGNFFTIRDVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGIID 348
+ + A +R ++ +HYR P++++ L +A L +
Sbjct: 286 -KEYDAETVRFFVVRSHYRSPLNYSDVHLDDARAALKRLYTALSLVAPAPVAIDWAEPHA 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+A+ D T A+ L LA E ++
Sbjct: 345 ARFKAAMDEDFGTPEAVAVLFDLAGEVNRSKS 376
>gi|78213484|ref|YP_382263.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|109894956|sp|Q3AI74|SYC_SYNSC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|78197943|gb|ABB35708.1| cysteinyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 493
Score = 315 bits (808), Expect = 7e-84, Method: Composition-based stats.
Identities = 166/529 (31%), Positives = 233/529 (44%), Gaps = 109/529 (20%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ N+L + F+ + +Y CG TVYD H+G+AR I +DVL R L +
Sbjct: 1 MSLRFTNSLTSRTEAFEPLTEGKASIYCCGVTVYDLCHLGHARSYINWDVLRRYLIWRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTY++N TDIDDKI+ RA +E + + ++ +N + F D RL L
Sbjct: 61 D--VTYIQNYTDIDDKILNRANEEGIT------MQAVSERNIEAFEVDMGRLNILPADRM 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
PRAT I + LI + G AY ++ ++ FD S NYG S R D+Q+ T
Sbjct: 113 PRATGCIEGIQTLISELESKGAAYSSDGDVYFDISKAKNYGKLSGRDPDDQQQGASGRTA 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
E+ K++P DF LWK + EP WESPWG GRPGWHIECSAM LG+ DIH GG
Sbjct: 173 DGEESRKRHPFDFALWKGAKAGEPSWESPWGPGRPGWHIECSAMVRQELGQTIDIHLGGG 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENEIAQS A+ A +W+HNG +N+ G KMSKS GNF TI LL++
Sbjct: 233 DLVFPHHENEIAQSETANGT-TLAKLWMHNGMVNVGGTKMSKSLGNFTTIRALLDS---- 287
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------- 338
+RL +L HYR+P+DFT + L A
Sbjct: 288 --GISPMTLRLFVLQAHYRKPLDFTAEALEAAATGWKGLNAALSLGGRHGESLGWSTAAP 345
Query: 339 -----------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
T+ ++ +SA+ +DLN+ + L LA+ + L
Sbjct: 346 LAEGAMNADGGPADTALVELEQRFISAMDDDLNSSGGLAVLFDLAKPLRSLANRLERGED 405
Query: 384 ----------------IFNASAHILGIEVCKEHLNKNISIAIE----------------- 410
+ A +LG+ E AI+
Sbjct: 406 AALPELELKGLEGRWQLLRHLAAVLGLRSEAEAAPSLDDGAIDVAIAARKAAKAAKDFAE 465
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L ++G L D +T W +
Sbjct: 466 A-----------------DRIRDELAAQGVELIDKPGG-----VTEWIR 492
>gi|320101049|ref|YP_004176641.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753401|gb|ADV65159.1| cysteinyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 484
Score = 315 bits (808), Expect = 8e-84, Method: Composition-based stats.
Identities = 164/495 (33%), Positives = 234/495 (47%), Gaps = 56/495 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ +K+Y+TL R + E + ++P ++MYVCGPTVYD+ HIG+ + +++D R L
Sbjct: 4 ILPDVKVYDTLSRGLKELRPVEPGIVKMYVCGPTVYDYTHIGHGKTYVIYDAFKRYLSLR 63
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V +V NITDIDDKII R+ +E + I + T+ ++ +L
Sbjct: 64 GY--HVVHVMNITDIDDKIIRRSHEEGRD------WNEIVEEYTRDYISALEKLNVK-VD 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PR + HI ++I IQ +I G+AY + + FD +YG S R+ + +
Sbjct: 115 HHPRVSEHIDEIIRFIQGLIDKGYAYVAPSGSVYFDVDKYEDYGRLSGRESRDTWGQEQE 174
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KKNP DF LWK + P EP WESPWG+GRPGWHIECS MSS YLG FDIHGGG D
Sbjct: 175 FLSE-KKNPYDFALWKAAKPGEPYWESPWGKGRPGWHIECSVMSSRYLGSRFDIHGGGTD 233
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENE AQS + +IW+H+G + + KMSKS N + + E +
Sbjct: 234 LIFPHHENERAQSEAYFGSKPWVSIWMHSGLVMVGKDKMSKSLKNIVPLKEAFD------ 287
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----------- 348
W +RL L THYR+P+ F + L A L + + G +
Sbjct: 288 -KWGPMPLRLWYLSTHYRKPLYFFEEALENAVKLYERLVTAAQLLGKLSREASGLHYARD 346
Query: 349 -------------PAVLSALYNDLNTVSAIQALHK----LARESTKN------HDLLPIF 385
AL +D NT A+ A+++ L R+ N + +
Sbjct: 347 EDLKVFSQLVSLHRRFHEALSDDFNTAEAMAAVNEYLTILFRDIQHNPRHLLVSTSIKLL 406
Query: 386 NASAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LG+ + + I LV R L K + +D IR L G
Sbjct: 407 REFNSVLGVLDKELEAVGEAEALLDSVIGILVNVRRELRKRGLYDLSDAIRSDLSKIGIQ 466
Query: 442 LEDYKNPDNGQRMTR 456
L D + R+ R
Sbjct: 467 LMDKGLETSWIRVRR 481
>gi|302803761|ref|XP_002983633.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
gi|300148470|gb|EFJ15129.1| hypothetical protein SELMODRAFT_119009 [Selaginella moellendorffii]
Length = 502
Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats.
Identities = 180/516 (34%), Positives = 242/516 (46%), Gaps = 91/516 (17%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R+ F+ P + MYVCG T YD++HIG+AR + FDVLYR + E VTYVR
Sbjct: 1 MSREKEVFRPRIPGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFPFMGYE--VTYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TDIDDKII+RA + D ++++ +F +D L CLAP+ +PR + +I
Sbjct: 59 NFTDIDDKIIKRAN------DLGDDPIELSNRFCDEFHRDMASLRCLAPSLEPRVSRNID 112
Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN-----YGSFSRRKIDEQKMGTRVPEKYH 184
Q+I +I I+ +G+ Y N ++ F YG S RK+D+ + G RV
Sbjct: 113 QIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDSYGRLSGRKLDDNRAGERVAVDDR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DF+LWK + EP WESPWG GRPGWHIECSAMS LG FDIHGGG+DLIFPH
Sbjct: 173 KLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPH 230
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEI QS A E W+HNGF+ ++ KMSKS GNF TI E+ E +
Sbjct: 231 HENEIVQSRAACH-ESNVTYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHP 282
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL--------- 355
+R +L THYR PI+++ +L A L QT
Sbjct: 283 LALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKA 342
Query: 356 ---------------YNDLNTVSAIQALHKLAREST---------------KNHDLLPI- 384
+DLNT I AL + + + DLL +
Sbjct: 343 AEIAKALRLSLRSSLADDLNTPVTIGALSEPLKLMNELLHSKKGRKDKSRYSSLDLLRLE 402
Query: 385 FNASAHILGI----------------EVCKEHLNKNI------SIAIEKLVQERLILLKM 422
+ +LG +V +E +K + + + ER
Sbjct: 403 VEQALEVLGFSVADYSQALITQLFLSQVLEELRSKALKRAGLTEDELLLQIHERAAARAS 462
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K F +D IR +L S G L D G T W+
Sbjct: 463 KDFGKSDEIRDKLSSLGISLMD-----GGGDETLWR 493
>gi|154486613|ref|ZP_02028020.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
L2-32]
gi|154084476|gb|EDN83521.1| hypothetical protein BIFADO_00430 [Bifidobacterium adolescentis
L2-32]
Length = 553
Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats.
Identities = 153/540 (28%), Positives = 226/540 (41%), Gaps = 109/540 (20%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+Y+T ++ F I P + +YVCG TV HIG+ R + FDV+ R V
Sbjct: 37 LYDTASHAVSSFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWFERLGY--KV 94
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T+VRN+TDIDDKI+++A ++F + ++L PT++PRAT
Sbjct: 95 TFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYSKLGVEPPTYEPRAT 148
Query: 127 NHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ------ 173
H+ MI LI+ II +GH Y + FD +S P+YG + +K
Sbjct: 149 GHMIDMIDLIKKIIDNGHGYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 208
Query: 174 -----------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRP 213
K +P DF LWK +P W +P+G GRP
Sbjct: 209 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 268
Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
GWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ ++
Sbjct: 269 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAWVTA 326
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 327 KGEKMSKSLGNGLSVPAVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEAQSA 379
Query: 334 LSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLARES 375
+ G + ++A+ +D+N A A+ R
Sbjct: 380 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 439
Query: 376 TKNHDLLP-----------------IFNASAHILGIEVCKEHL----------------- 401
L A LG++ E
Sbjct: 440 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 499
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + + + + ER K K F+ AD IR L + G +ED G + + W K
Sbjct: 500 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED------GPQGSTWSLK 553
>gi|317404801|gb|EFV85180.1| CysS protein [Achromobacter xylosoxidans C54]
Length = 484
Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats.
Identities = 168/497 (33%), Positives = 240/497 (48%), Gaps = 55/497 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL R F+ +RMYVCG TVYDF H+G+AR ++ FDV+ R LR
Sbjct: 1 MLQIYNTLSRTKEPFKPAQAGQVRMYVCGMTVYDFCHLGHARMLVSFDVVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L +P +P
Sbjct: 59 LAVDYVRNITDIDDKIIRRAVETG------RRIGEVTEFYIAAMHADERALGVASPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + G AY+ + ++ + YG S + +D+ + G RV
Sbjct: 113 RATQYVGEMLDIIGKLEQKGLAYQADDGDVNYAVRGFEGYGKLSGKTLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SAKRDPLDFVLWKSAKEEEPADTKWESPYGLGRPGWHIECSAMSKSLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQ+ A ANIW+H G L ++ KMSKS GNF TI + + +
Sbjct: 233 LKFPHHENEIAQTEGAFG-GTLANIWMHCGPLMVDSDKMSKSLGNFRTIRQTIAQGEPAA 291
Query: 300 RSWP-------APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
+ A ++R ++ HYR P ++T L +A+ L + Q
Sbjct: 292 DTADYRVNPREAEMVRFFIVRNHYRSPQNYTPDNLVDAQNALDRLYQALQNVPADDQGID 351
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--------------------L 382
A +A+ +D N+ A+ AL +LA E+ +
Sbjct: 352 WNEPQAQAFKAAMDDDFNSSGAVAALFELASEANRGKSARSAGQLKALGGLLGLLQQDPA 411
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
F +S + + + + AI+ L+ R + F+ AD IR +L G L
Sbjct: 412 AYFQSSTRYSAAGMEQGARAELDAAAIQALIDARAAAKAARDFAQADRIRAELREAGIEL 471
Query: 443 EDYKNPDNGQRMTRWKQ 459
+D T+W++
Sbjct: 472 DDKPGGL-----TQWRR 483
>gi|210623152|ref|ZP_03293607.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
gi|210153796|gb|EEA84802.1| hypothetical protein CLOHIR_01557 [Clostridium hiranonis DSM 13275]
Length = 420
Score = 315 bits (807), Expect = 9e-84, Method: Composition-based stats.
Identities = 154/443 (34%), Positives = 222/443 (50%), Gaps = 56/443 (12%)
Query: 49 VFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
+FD L R L Y + VTYV+N TD+DDKII+R+ +E S + K +++
Sbjct: 1 MFDTLRRYLEYQGYD--VTYVQNFTDVDDKIIKRSHEEGIS------PEEVAEKYIKEYF 52
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
D L T P+ T +IPQ+I IQ + G+AY N ++ FDT YG S +
Sbjct: 53 VDCDGLGIKRATVHPQVTQNIPQIIEFIQELEEKGYAYAVNGDVYFDTRKFEGYGKLSGQ 112
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
ID+ + G R+ K++P DF+LWK EPGW+SPWG GRPGWHIECS MS YLG
Sbjct: 113 NIDDLEAGARIEVNEQKRHPMDFVLWKAKKEGEPGWDSPWGEGRPGWHIECSVMSKRYLG 172
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNF T+
Sbjct: 173 ETIDIHAGGQDLTFPHHENEIAQSEARSG-KPFAKYWMHNGYINVNNEKMSKSKGNFFTV 231
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---- 344
++ + + ++R +L HY+ P++F+ L +A L + T
Sbjct: 232 RDI-------SKKYDLEIVRFFLLSAHYKSPVNFSDDLLAQAGAGLERLYNTKEKLVFTL 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----- 381
+ + +DLNT AI A+ +L++ N D
Sbjct: 285 SHLEGEMTDAEKALVEELDGFRKKFVEVMDDDLNTADAITAIFELSKFINLNVDENSSKE 344
Query: 382 -----LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
L FN +L I + + ++ +E L+Q+R K K F+ AD IR+QL
Sbjct: 345 FAEKCLAEFNELTGVLNI--VNKEKDNSVDAEVEALIQQRTDAKKNKDFAKADAIRQQLL 402
Query: 437 SKGFILEDYKNPDNGQRMTRWKQ 459
G +LED + + +WK+
Sbjct: 403 DMGIVLEDTR------QGVKWKR 419
>gi|330443848|ref|YP_004376834.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
gi|328806958|gb|AEB41131.1| cysteinyl-tRNA synthetase [Chlamydophila pecorum E58]
Length = 475
Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats.
Identities = 154/494 (31%), Positives = 231/494 (46%), Gaps = 60/494 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+K + +YNT R+ F +++Y CGPTVYDFAHIGN R I D+L R L +
Sbjct: 7 QKPLYLYNTASRQKEAFSPYASP-VKLYTCGPTVYDFAHIGNFRTYIFEDLLKRTLIFLG 65
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VT+V NITD+DDK + A ++ S+ T Q F +D L
Sbjct: 66 Y--SVTHVMNITDVDDKTLAGACKQGISL------QEYTQPYIQAFFEDLETLHISRADA 117
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PRAT++IPQMI I+ ++ G AY ++ + F S +YG S + + + T+
Sbjct: 118 YPRATHYIPQMIQAIEKLLDQGAAYIGHDASVYFSISRFSSYGKLSHLHLQDLQCCTQNT 177
Query: 181 EKYHKKNP-ADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K DF+LWK + WESP+G+GRPGWH+ECS M+ LG+ DIH G
Sbjct: 178 SDEYDKENLCDFVLWKAYNSERDGKIYWESPFGKGRPGWHLECSIMAMELLGESIDIHAG 237
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D IFPHHENEIAQS + A W+H+ L ++G+KMSKS GNF+T+ +L
Sbjct: 238 GVDNIFPHHENEIAQSETLSG-KPFARYWLHSEHLLVDGKKMSKSLGNFLTLRDLTH--- 293
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
R + +R +L +HYR ++FT + L L + + P
Sbjct: 294 ---RGFSGEELRYMLLQSHYRTQLNFTEEGLLSCRQALKRLRDFISRLQEPYPDGEQPSE 350
Query: 357 ------------------NDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
NDLN + +L E+ D +L +
Sbjct: 351 ATRTVAKTLLTNFTDALTNDLNIAVGLASLFDFVHETHSLIDAGSFSKADAEHILALLKH 410
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+L + ++ I + +LV +R K + AD++R ++ + GF++ED K+
Sbjct: 411 LNQVLKVLPISASIS--IPDRVWELVMKREKARTSKSWKEADFLRNEILALGFVVEDSKS 468
Query: 448 PDNGQRMTRWKQKP 461
K KP
Sbjct: 469 GP--------KVKP 474
>gi|317011097|gb|ADU84844.1| cysteinyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
Length = 465
Score = 315 bits (807), Expect = 1e-83, Method: Composition-based stats.
Identities = 156/487 (32%), Positives = 238/487 (48%), Gaps = 56/487 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MLIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 113 ASEYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQ 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGG 237
K+ DF+LWK + G++SP G+GRPGWHIECS+M + DIH GG
Sbjct: 171 EKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+DL+FPHHENE Q+ C +E A W+HNGF+N+ KMSKS GN I + L
Sbjct: 231 VDLLFPHHENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----KGIID----P 349
+++ ++R +L HYR ++F + L ++ L K + G ID
Sbjct: 285 --KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGSLGNIDLNFKK 342
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI---- 394
+L + +DLN A+ L + + D +L +LGI
Sbjct: 343 EILECMQDDLNISKALSVLESMLSSMNEKLDQNPKNKALKGEILANLKFVEELLGIGFKN 402
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E + +N++ IEK ++ER + K F AD IR++L L D
Sbjct: 403 PTEYFQLGVNESEKQEIEKKIEERKRAKEQKDFMKADSIREELLKCKIALMDT------P 456
Query: 453 RMTRWKQ 459
+ T W++
Sbjct: 457 QGTTWEK 463
>gi|206602428|gb|EDZ38909.1| Cysteinyl-tRNA synthetase, class Ia [Leptospirillum sp. Group II
'5-way CG']
Length = 490
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 172/473 (36%), Positives = 235/473 (49%), Gaps = 43/473 (9%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
NTL +K P + MYVCG TVYD H+G+AR VFD+L+RLL V Y
Sbjct: 21 NTLTQKTELLSPRIPGEVTMYVCGVTVYDDCHLGHARSQTVFDLLHRLLLRLGY--RVRY 78
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
VRNITDIDDKII +A++ I+ IT F +D RL L P +PRAT +
Sbjct: 79 VRNITDIDDKIIRKAQETG------RTITEITDIYIDSFQRDMRRLGILPPDKEPRATLY 132
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ MI LI ++ G AY+ N++ F YG S +K+DE + G R+ K++P
Sbjct: 133 LDPMIRLIGTLLDKGFAYKKGNDVYFRVRKYGAYGELSHQKLDELQSGARIAADEEKEDP 192
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK + EP + + +G GRPGWHIECSAMS LG+ DIHGGG+DL+FPHHENE
Sbjct: 193 LDFALWKGAKTGEPSYPAFFGEGRPGWHIECSAMSLSELGETIDIHGGGMDLMFPHHENE 252
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
AQS A ++ IWIHNGF+ L KMSKS GN I ET F +R
Sbjct: 253 RAQSESATG-KRFVGIWIHNGFVTLNEEKMSKSLGNIFRIRTFFETSPF-PEGVTREWLR 310
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSALYNDL 359
+L THY P+D T + L A+ L +G + L+AL +D+
Sbjct: 311 AFLLSTHYASPVDLTDENLAHAKNALDSLYLFKDRLDSMFGEAREGPMTQEFLAALCHDM 370
Query: 360 NTVSAIQALHKLAREST------------KNHDLLPIFNASAHILGIEVCKEH------- 400
+T A + LH+ + D+ +F + LGI
Sbjct: 371 DTPVAFRILHEAKNTLNPLLGALGDVEEDRLSDVRALFEVAKKTLGILTLPASEWIYGKG 430
Query: 401 -----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+++LV ER + K ++ AD IR++L+ G++LED
Sbjct: 431 EKTGRAESLPPEEVDRLVLEREKARREKDYARADAIRERLKKAGYLLEDNPGG 483
>gi|217032936|ref|ZP_03438411.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
gi|216945346|gb|EEC24018.1| hypothetical protein HPB128_147g9 [Helicobacter pylori B128]
Length = 462
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 148/479 (30%), Positives = 227/479 (47%), Gaps = 56/479 (11%)
Query: 13 RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
K F+ + + +YVCGPTVYD AH+G+AR I FD+L R L E V VRN
Sbjct: 6 NKKVPFEPLIQNKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRNF 63
Query: 73 TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++ M
Sbjct: 64 TDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAM 117
Query: 133 IYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ +I+ ++ AY +N +I DTS +YGS S R+ K+ DF
Sbjct: 118 VGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDF 175
Query: 192 ILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHH 245
+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPHH
Sbjct: 176 VLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHH 235
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
ENE Q+ CA +E A W+HNGF+N+ KMSKS GN + + L +++
Sbjct: 236 ENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFVKDAL-------KNYDGE 287
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLSALYN 357
++R +L HYR ++F + L ++ L K + +L + +
Sbjct: 288 ILRNYLLGVHYRSVLNFNEEDLLMSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQD 347
Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL----- 401
DLN A+ L + + + D +L +LGI
Sbjct: 348 DLNISKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPSAYFQLG 407
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE ++ER K F AD+IR++L + L D + T W++
Sbjct: 408 VSESEKQEIENKIEERKRAKAQKDFLKADHIREELLKQKIALMDT------PQGTIWEK 460
>gi|33592950|ref|NP_880594.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|61216293|sp|Q7VX96|SYC_BORPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33572598|emb|CAE42190.1| cysteinyl-tRNA synthetase [Bordetella pertussis Tohama I]
gi|332382362|gb|AEE67209.1| cysteinyl-tRNA synthetase [Bordetella pertussis CS]
Length = 486
Score = 315 bits (806), Expect = 1e-83, Method: Composition-based stats.
Identities = 153/420 (36%), Positives = 215/420 (51%), Gaps = 33/420 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F+ +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR
Sbjct: 1 MLHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L P +P
Sbjct: 59 LAVDYVRNITDIDDKIIRRAVETG------RRIGEVTEYYIAAMHADERALGVQPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + G AY + ++ + +YG S + +D+ + G RV
Sbjct: 113 RATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SAKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK---- 295
L FPHHENEIAQ+ A AN+W+H G L ++ KMSKS GNF TI + +
Sbjct: 233 LKFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGPLSD 291
Query: 296 ---KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------S 341
++ A ++R ++ HYR P ++ L +A+ L + Q
Sbjct: 292 TQAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVD 351
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKE 399
S+ A +A+ +D N+ A+ AL +LA E+ + + A +LG+
Sbjct: 352 WSEEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAVGQLKALGAVLGLLQQDP 411
>gi|307298183|ref|ZP_07577987.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916269|gb|EFN46652.1| cysteinyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 462
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 167/477 (35%), Positives = 249/477 (52%), Gaps = 42/477 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+I++ NT+ R+ F+ + + +Y CG TVY+FAHIGN R + D L R + +
Sbjct: 1 MEIRLTNTMSRRKEIFKPLKIGEVGIYTCGLTVYNFAHIGNLRAYVFADTLKR--MFLFN 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V +V NITD+ +DK+ AR+E ++ I T+ F KD
Sbjct: 59 GYKVRHVMNITDVGHLTGDEDEGEDKMEAGARREGKTV------WEIVDFYTKAFFKDLE 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
RL + PT RAT H+ MI +IQ I +G+ Y A + FDTS +P+YG +R ++DE
Sbjct: 113 RLRIILPTVTCRATEHVQDMIDMIQKIEANGYTYIAGGNVYFDTSKVPDYGKLARLQLDE 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGK 229
+K+ +RV KKNP DF+LW E W+SPWGRG PGWHIECSAM+S YLG+
Sbjct: 173 EKIRSRVENDPFKKNPFDFVLWFTRYKYENHAMQWDSPWGRGFPGWHIECSAMASKYLGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL-EGRKMSKSNGNFITI 288
FDIH GG+D I HH NEIAQS A E N W+H+ FL + EG KMSKS GNFIT+
Sbjct: 233 RFDIHTGGIDHIPVHHTNEIAQSEAAFGHE-WVNFWLHSEFLVIGEGEKMSKSLGNFITL 291
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------- 337
L++ R + R +L HY++ + FT++ L A+ + K
Sbjct: 292 QTLID------RGYEPADYRYYLLGAHYKKQLTFTMEALDGAKSAMKKLITRIEELKELN 345
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEV 396
+ + A+ +DLNT A+ L K+ E + + L + + +LG+ +
Sbjct: 346 ESETRPNDDLMNEFHEAINDDLNTPKALAVLWKVVDSEDLRPGEKLSLIDRFDEVLGLGL 405
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
E +K I + +L +R K + + AD +R+ + KG+ + D ++ +R
Sbjct: 406 -SEVESKTIPEEVIELANQRDAARKERNWEKADELRQLISEKGYEVLDERDGYKIRR 461
>gi|14325506|dbj|BAB60409.1| tRNA synthetase Cys [Thermoplasma volcanium GSS1]
Length = 472
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 159/474 (33%), Positives = 241/474 (50%), Gaps = 40/474 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ + IYNTL R++ EF + + ++VCGPTV D HIG+AR I FD + + L+
Sbjct: 16 EQLMLIYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEG 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V Y++NITDIDDKII RA++ S + +F +D RL +
Sbjct: 76 Y--SVFYLQNITDIDDKIINRAKEMGIE------PSEVAKIYFSEFQEDMKRLKVDSVNF 127
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
RAT +I +++ I ++ G+AYE ++ + F+ +YG S + +D+ G RV
Sbjct: 128 FARATLYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAV 187
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+K+NP DF+LWK+ EP W SPWG GRPGWHIE +A++ Y G +DIHGGG DLI
Sbjct: 188 NENKRNPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLI 247
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE EIAQ A+ WIH G +N+ KMSKS NFITI ++L +
Sbjct: 248 FPHHEAEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KD 300
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------- 348
+ +R A+L +YR I+F+ + + E++ L+ T ++
Sbjct: 301 YRPEDLRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVI 360
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKE 399
+ S ND + S I L + E +N +L ++ LGI K+
Sbjct: 361 SEMRSLAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKK 420
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++K I ++ LV+ R + K K F +D IR L+ G +ED + +
Sbjct: 421 EVSKGI---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIEDRGDVTVWWQ 471
>gi|229492425|ref|ZP_04386229.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
gi|229320654|gb|EEN86471.1| cysteinyl-tRNA synthetase [Rhodococcus erythropolis SK121]
Length = 466
Score = 314 bits (805), Expect = 1e-83, Method: Composition-based stats.
Identities = 159/484 (32%), Positives = 241/484 (49%), Gaps = 52/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IY++ + + EF + P+ + +YVCGPTV HIG+ R +V+D+ R L +
Sbjct: 1 MVIRIYDSGHQALREFVPLRPARVSIYVCGPTVQSAPHIGHLRSALVYDLWRRWLTHRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ A + + + +F + T L L PT++
Sbjct: 61 --TVTLVRNVTDIDDKILALATES-------EPWWARAYRVETEFTRAYTALGILPPTYE 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PR + HI + + LI ++ GHAY + + ++ FD SS YG+ +R+ + + +
Sbjct: 112 PRTSGHITEALALIDRLLRRGHAYVASDGSGDVYFDVSSWQTYGTLTRQN-PDALLQSDD 170
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K+NP DF LWK + P EP W SPWG GRPGWHI+CSAMS YLG FDIHGG
Sbjct: 171 GHRQAKQNPQDFALWKGTNPSEPKSARWPSPWGTGRPGWHIQCSAMSRRYLGPAFDIHGG 230
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQS A ++ A W+HNG + + G+KM+KS N+++ +ELL
Sbjct: 231 GIDLRFPHHENELAQSTAAG--DEFARYWVHNGLVTISGQKMAKSLDNYLSADELL---- 284
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------KG 345
R +R +L HYR +D+ + LT + +++
Sbjct: 285 ---RRVGPATLRYYLLSAHYRSALDYQEEALTYTQATVARIANFQHRARTHLEDATAGDP 341
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIE- 395
+ A +AL +DLN ++A+ LH R D A +LGIE
Sbjct: 342 TLPGAFAAALDDDLNVLAALGVLHDHVRAGNIAVDNGETAAAAAAYQSITAMTSVLGIET 401
Query: 396 ------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ ++ +E L+ R F +AD IR L G ++ED+ +
Sbjct: 402 ESSPTAPRDGQHSSTVTALVEVLLANRSCARGEGDFVTADRIRGDLARSGIVIEDHSSGT 461
Query: 450 NGQR 453
+
Sbjct: 462 TWTQ 465
>gi|269957728|ref|YP_003327517.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269306409|gb|ACZ31959.1| cysteinyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 480
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 155/504 (30%), Positives = 232/504 (46%), Gaps = 81/504 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R +++F P + +YVCG TV H+G+ RP + FDVL R L
Sbjct: 1 MSLRLYDTATRTVSDFVPRTPGQVGIYVCGATVQSSPHVGHLRPSVAFDVLRRWLTRNGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VT VRNITDIDDKI+ +A ++ ++F L L PT++
Sbjct: 61 Q--VTLVRNITDIDDKILAKAAAAGVE------WWAHAARYEREFTAAYDALGVLPPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDE-----QKMG 176
PRAT H+ QM+ L++ ++ GHAY + FD S P YG +R+++++ Q
Sbjct: 113 PRATQHVTQMVELMERLVERGHAYTTGEGNVWFDVRSWPAYGELTRQRLEDLAPEPQSSD 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ K+N DF LWK P EP W +PWG GRPGWH+ECSAM+ YLG FDI
Sbjct: 173 DVAYPGHAKRNVHDFALWKAPKPGEPATAAWPTPWGPGRPGWHLECSAMAQRYLGDEFDI 232
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGGLDL FPHHENE AQS A A W+H ++ G KMSKS GN + ++ELL
Sbjct: 233 HGGGLDLRFPHHENEQAQSRAAGFG--FARRWLHAAWITQSGVKMSKSLGNGLLVSELL- 289
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------- 343
++ PAPV+R A++ YR +++ L EA +
Sbjct: 290 ------KTTPAPVVRYAIVAVQYRSMLEWAPDTLAEATTTWDRLCGFVERATERVGAVDA 343
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNAS 388
K + ++AL +DLN +A+ +H+ R
Sbjct: 344 DEIAKAELPVGFVAALDDDLNVPAALAVVHEHLRAGNTALAASAGNDAAVRAELVAVRGM 403
Query: 389 AHILGIEVCKEHLNKNISI------AIEKLVQ--------------ERLILLKMKKFSSA 428
+LG++ + + A++ LVQ +++
Sbjct: 404 LDVLGLDPADPQWARTDAASSSTRHALDALVQAELEARAAARAAKDW----------AAS 453
Query: 429 DYIRKQLESKGFILEDYKNPDNGQ 452
D IR +L G +++D +
Sbjct: 454 DAIRDRLAGAGILVQDGPDGARWT 477
>gi|58584937|ref|YP_198510.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|81311609|sp|Q5GRV6|SYC_WOLTR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|58419253|gb|AAW71268.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 433
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 186/452 (41%), Positives = 261/452 (57%), Gaps = 41/452 (9%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG+ TYVRNITDIDDKII A ++
Sbjct: 1 MYVCGPTVYDTAHIGNARSIVVYDVLFQLLKFCYGKA--TYVRNITDIDDKIINAANEKD 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
S I I++ T+ F +D + C+ PTH+P+A +I +I LI+ ++ GHAYE
Sbjct: 59 SS------IESISTYYTRAFHEDMRSINCVEPTHEPKAAENIKYIIELIEYLLQSGHAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
+N I F S P YG+ S +KIDE + G+RV +KK+P DF+LWK + +
Sbjct: 113 SNKHIYFSIESYPEYGALSGKKIDELEHGSRVEVGENKKHPGDFVLWKPANDTDYKLSSY 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL FPHHENEIAQ+ A A
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQNKSAFAGSMFAK 232
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNG L + KMSKS N + + +LL++ VIR A+ THYR+P+D+T
Sbjct: 233 YWVHNGSLTVNKEKMSKSLFNIVKVRDLLDS------GIKGEVIRYALFKTHYRKPLDWT 286
Query: 324 VQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARE 374
++E++ L+K+ + + + L NDLN A+ LH++A +
Sbjct: 287 ESVISESQETLNKFYRLLRGIDVASIEKSDVEVSRDFIETLKNDLNIPEALAILHEMATK 346
Query: 375 STKNHD------LLPIFNASAHILGIEVC--KEHLNKNIS-IAIEKLVQERLILLKMKKF 425
K ++ L F SA +G+ +E IS I++L+ R + + K +
Sbjct: 347 INKTNNENEKLKLTESFIKSARFIGLLESSYQEWFTAGISYQEIKRLIDLRKVAKQNKDY 406
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+AD IR QL+ G + D ++ T W
Sbjct: 407 DAADKIRDQLKQMGVTISDNEDGT-----TTW 433
>gi|70605996|ref|YP_254866.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|76363434|sp|Q4JCA6|SYC_SULAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|68566644|gb|AAY79573.1| cysteinyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
Length = 469
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 167/486 (34%), Positives = 240/486 (49%), Gaps = 55/486 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+I F++ DP ++MYVCGPTVYD+ HIG+ R + FD + R L+
Sbjct: 1 MNP-LRLYNTLGRRIETFESFDPLTVKMYVCGPTVYDYVHIGHGRAFVGFDGIVRYLKLR 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+NITDIDDKII+RA + I T+ +++ L
Sbjct: 60 GF--NVIRVQNITDIDDKIIKRANETGKD------WREIVDYYTKDYMESLKALKVEIDQ 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
H PR T+HI ++I +Q ++ GHAY ++ + FD S P+YG S K +E G +
Sbjct: 112 H-PRVTSHIQEIIDFVQKLVDKGHAYITSSGSVYFDVDSFPSYGLLSGSKKEEWNQGEEI 170
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
++ KKNP DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG+ FDIHGGG+D
Sbjct: 171 VKE--KKNPYDFALWKAWKPGEPYWESPWGKGRPGWHIECSTMSTRYLGEQFDIHGGGVD 228
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQS + W+H +L + KMSKS GN I +NE L
Sbjct: 229 LVFPHHENERAQSESLLG-KIWVKYWVHVAYLTINKEKMSKSLGNIIPLNEAL------- 280
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------- 349
+ W V+R L T YR ID++ Q L +A L + +
Sbjct: 281 KKWGPSVLRFWYLSTKYRNSIDYSEQTLEQARSSLQRLKDAMGIIRSVIKEEPKSHSNEE 340
Query: 350 -------------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFN 386
A+ ND +T +A+ ++++A F
Sbjct: 341 EISTQREIISLIGKFHEAMSNDFDTATALSNIYEIANLVFTKIQYTRDFMGAMLAFDAFR 400
Query: 387 ASAHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++ G+ + + + + I+ +V+ R IL K + +D IR L + G + D
Sbjct: 401 QFNYVFGVMDEEFSPSYETMYKVIDSVVEIRNILRARKMYDLSDEIRSVLANAGIKILDG 460
Query: 446 KNPDNG 451
K
Sbjct: 461 KEKSTW 466
>gi|119025230|ref|YP_909075.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
gi|118764814|dbj|BAF38993.1| cysteinyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
Length = 543
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 153/540 (28%), Positives = 226/540 (41%), Gaps = 109/540 (20%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+Y+T ++ F I P + +Y CG TV HIG+ R + FDV+ R V
Sbjct: 27 LYDTASHAVSSFTPIKPGQVGIYACGATVQSSPHIGHIRAAVAFDVVRRWFERLGY--KV 84
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
T+VRN+TDIDDKI+++A ++F + ++L PT++PRAT
Sbjct: 85 TFVRNVTDIDDKILDKAAAAG------QQWWERAYIYEREFTEAYSKLGVEPPTYEPRAT 138
Query: 127 NHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQ------ 173
H+ MI LI+ II +GHAY + FD +S P+YG + +K
Sbjct: 139 GHMIDMIDLIKKIIDNGHAYVVRDADGNPTGNVYFDVASWPHYGELTHQKQTAVSDAASE 198
Query: 174 -----------------KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRP 213
K +P DF LWK +P W +P+G GRP
Sbjct: 199 VTDAMGPSVDNAGNDKYNPVDPADMSPDKHDPRDFALWKAPKDSDPLDARWNTPFGTGRP 258
Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
GWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A + A W+H+ ++
Sbjct: 259 GWHIECSAMSHRYLKDMFDIHGGGLDLRFPHHENEMAQTRAA-GYDSAAR-WMHSAWVTA 316
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+G KMSKS GN +++ +L A V+R A+ YR ++++ Q L EA+
Sbjct: 317 KGEKMSKSLGNGLSVPAVLAEH-------SAWVVRYALGSVQYRSMLEWSDQTLAEAQSA 369
Query: 334 LSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLARES 375
+ G + ++A+ +D+N A A+ R
Sbjct: 370 YDRVANFIERAGAAVGEQPSREEIMAISADALPADFVAAMNDDINVSGASAAIFTAIRSG 429
Query: 376 TKNHDLLP-----------------IFNASAHILGIEVCKEHL----------------- 401
L A LG++ E
Sbjct: 430 NTLLSKLADRADSDVAKAEVREALVNVRAMLDTLGLDPLAEPWVSDGAAGGAAGAGADSA 489
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ + + + + ER K K F+ AD IR L + G +ED G + + W K
Sbjct: 490 EHDALDKLVSEQLAERAEARKAKDFARADAIRDALGAAGIAIED------GPQGSTWSLK 543
>gi|13542075|ref|NP_111763.1| cysteinyl-tRNA synthetase [Thermoplasma volcanium GSS1]
gi|21264017|sp|Q978Z5|SYC_THEVO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 454
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 159/471 (33%), Positives = 239/471 (50%), Gaps = 40/471 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYNTL R++ EF + + ++VCGPTV D HIG+AR I FD + + L+
Sbjct: 1 MLIYNTLTRRLQEFNEMHRGRVNLFVCGPTVQDHFHIGHARTYIFFDAVAKFLKLEGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII RA++ S + +F +D RL + R
Sbjct: 59 SVFYLQNITDIDDKIINRAKEMGIE------PSEVAKIYFSEFQEDMKRLKVDSVNFFAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +++ I ++ G+AYE ++ + F+ +YG S + +D+ G RV +
Sbjct: 113 ATLYIDEIVSQISRMMEKGYAYETDDGVYFEVRKFKDYGELSNQSLDQIIAGYRVAVNEN 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ EP W SPWG GRPGWHIE +A++ Y G +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKKKAGEPSWPSPWGEGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ A+ WIH G +N+ KMSKS NFITI ++L + +
Sbjct: 233 HEAEIAQMRSISGKRYLAHYWIHTGMININKEKMSKSLKNFITIRDIL-------KDYRP 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------PAV 351
+R A+L +YR I+F+ + + E++ L+ T ++ +
Sbjct: 286 EDLRFAILNANYRTQIEFSKELMEESKKLIDYINDTYRKLEYVNGSGNFKIDVNSVISEM 345
Query: 352 LSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLN 402
S ND + S I L + E +N +L ++ LGI K+ ++
Sbjct: 346 RSLAENDFDFHSVIVKLLAITGEINRNFEGINKEVAEELKKVYLWVDTFLGILEQKKEVS 405
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
K I ++ LV+ R + K K F +D IR L+ G +ED + +
Sbjct: 406 KGI---VDDLVELRTRMRKEKNFLISDAIRDVLKKNGIHIEDRGDVTVWWQ 453
>gi|328955961|ref|YP_004373294.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
gi|328456285|gb|AEB07479.1| cysteinyl-tRNA synthetase [Coriobacterium glomerans PW2]
Length = 488
Score = 314 bits (805), Expect = 2e-83, Method: Composition-based stats.
Identities = 183/506 (36%), Positives = 247/506 (48%), Gaps = 76/506 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY++ R EF+ I+ +RMYVCGPTVYD AHIGNAR I D + R L E
Sbjct: 1 MRIYSSQTRVKREFKPIEAGRVRMYVCGPTVYDDAHIGNARTFITLDAIRRWLIASGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V+N+TD+DDKII RA + S + + ++F+ R L P +PR
Sbjct: 60 -VTFVQNLTDVDDKIIGRAADQGRSAE------QVAQQFAERFIDVMRRANVLDPDIRPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT IP MI +I+++I GHAY A N ++ F S P+YG S R IDE +G R+ E
Sbjct: 113 ATREIPAMIEMIKSLIKQGHAYAAGNGDVYFSVRSDPSYGEVSGRDIDELMVGARIEENA 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W+SPWG GRPGWH EC+AM +LG DIHGGG DLIFP
Sbjct: 173 VKRDPLDFALWKAAKPGEPMWDSPWGPGRPGWHTECAAMVHRHLGCPIDIHGGGSDLIFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ C E AN W+H G L ++G KMSKS GNF T+ E+L+
Sbjct: 233 HHENECAQAECCWH-EGFANTWLHVGMLMVDGEKMSKSLGNFWTLEEVLDRH-------S 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
A +RL ML THYR P+DF+ +RL A+ L + T +
Sbjct: 285 AAALRLLMLQTHYRTPLDFSFERLEGAQTSLGRIVSTVGNLRWASDRASGNPDASLAQGL 344
Query: 351 ----------VLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------PIFNA 387
+ +D NT A+ A LA + +
Sbjct: 345 ARRMQIARSEFKEQMDDDFNTAGALGACFSLATAARSYLECAGVSVDASIALACVEFLEE 404
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERL--------------------ILLKMKKFSS 427
S +LGIE+ L + + +L RL + ++
Sbjct: 405 SFSVLGIELPASAL--ELPAELVEL-AGRLVGYSGNDVAAAAEALLAARLDARIRRDWAC 461
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQR 453
AD IR +L G +ED +R
Sbjct: 462 ADGIRDELAQLGLSIEDTAAGPRLKR 487
>gi|146304825|ref|YP_001192141.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|187631639|sp|A4YIG5|SYC_METS5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145703075|gb|ABP96217.1| cysteinyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 465
Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 151/483 (31%), Positives = 232/483 (48%), Gaps = 57/483 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL +++ F+ +P+ ++MYVCGPTVYD HIG+ R + FD + R LR
Sbjct: 1 MQVFNTLGKRLQSFEPHEPNTVKMYVCGPTVYDEVHIGHGRTFVAFDAMSRYLRVKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V+NITDIDDKII +AR+ + + + ++ ++ +++ L P+
Sbjct: 59 NVVRVQNITDIDDKIINKARE------LGKSWNEVSEYYSKSYLEHIGALKVK-IDMHPK 111
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T HI ++I +Q +I GHAY AN + FD + P YG S K +E G + ++
Sbjct: 112 VTTHIKEIIDFVQRLIDSGHAYVANGSVYFDVDTYPGYGELSNVKKEEWDQGEEIVKE-- 169
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK P EP WESPWG+GRPGWHIECS MS+ YLG DIHGGG+DL+FPH
Sbjct: 170 KRHPYDFALWKAYKPGEPYWESPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGMDLVFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ W+H FL + KMSKS GN + + E L +
Sbjct: 230 HENERAQTESLTG-STWVKYWMHVAFLTIRKEKMSKSKGNIVPLKEALS-------KYGP 281
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
+R L + YR PI+++ + L ++ L + + I
Sbjct: 282 STLRYWFLSSQYRNPIEYSEEILEQSSRSLQRLKDAISVLRKIIQKGPAHYAKEEDVKVQ 341
Query: 350 --------AVLSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
+ ND +T +A+ ++H++A L F +
Sbjct: 342 EEIVRAISRFDEHMENDFDTSNALTSIHEIASIVFSKLQYSEDVFGALIALDGFRKFNEV 401
Query: 392 LGIEVCKEHLNKNIS---IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ E + + I+ +++ R L K + + +D IR L G + D K
Sbjct: 402 FAV--MDEEFSAELDRLTKVIDAVIEVRNYLRKKQMYDLSDQIRDILSRSGVKILDSKEG 459
Query: 449 DNG 451
Sbjct: 460 STW 462
>gi|33600720|ref|NP_888280.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
gi|61216294|sp|Q7W862|SYC_BORPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|61216296|sp|Q7WLL0|SYC_BORBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|33568320|emb|CAE32232.1| cysteinyl-tRNA synthetase [Bordetella bronchiseptica RB50]
Length = 485
Score = 314 bits (804), Expect = 2e-83, Method: Composition-based stats.
Identities = 152/419 (36%), Positives = 212/419 (50%), Gaps = 32/419 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL R F+ +RMYVCG TVYD+ H+G+AR ++ FDV+ R LR
Sbjct: 1 MLHIYNTLSRTKEPFKPAHAGQVRMYVCGMTVYDYCHLGHARMLVAFDVVQRWLRASG-- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YVRNITDIDDKII RA + I +T D L P +P
Sbjct: 59 LAVDYVRNITDIDDKIIRRAVETG------RRIGEVTEYYIAAMHADERALGVQPPDREP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT ++ +M+ +I + G AY + ++ + +YG S + +D+ + G RV
Sbjct: 113 RATQYVGEMLDIIGRLESKGLAYRAEDGDVNYAVRGFADYGKLSGKSLDDLRAGERVAVG 172
Query: 183 YHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P DF+LWK + P EP WESP+G GRPGWHIECSAMS LG DIHGGG D
Sbjct: 173 SAKRDPLDFVLWKSAKPQEPDDTKWESPYGLGRPGWHIECSAMSKTLLGLPLDIHGGGPD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK---- 295
L FPHHENEIAQ+ A AN+W+H G L ++ KMSKS GNF TI + +
Sbjct: 233 LKFPHHENEIAQTEGAFGGA-LANVWMHCGPLMVDADKMSKSLGNFRTIRQTIAQGALSD 291
Query: 296 ---KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------ST 342
++ A ++R ++ HYR P ++ L +A+ L + Q
Sbjct: 292 TQAEYAVNPREAEMLRFFIVRNHYRSPQNYAPDNLVDAQNALDRLYQALQNTAADGQGVD 351
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKE 399
A +A+ +D N+ A+ AL +LA E+ + A +LG+
Sbjct: 352 WSEPQAQAFKAAMDDDFNSSGAVAALFELASEANRTGSARAAGQLKALGAVLGLLQQDP 410
>gi|255322247|ref|ZP_05363393.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
gi|255300620|gb|EET79891.1| cysteinyl-tRNA synthetase [Campylobacter showae RM3277]
Length = 462
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 155/481 (32%), Positives = 237/481 (49%), Gaps = 52/481 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+++++RK EF+ + +R+YVCGPTVYD AH+G+A+ I FD+L R L
Sbjct: 1 MQIFDSVKRKKVEFEPVKSDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTLSELGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN TDIDDKI+++ + +++ IT + + +D + L L P +P+
Sbjct: 59 KVKFVRNYTDIDDKILKKMSESG------ESLEAITDRYIASYERDMSALNVLEPDVKPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT + +MI I+ ++ +G AYE ++ I FDT+ Y S S + E RV
Sbjct: 113 ATQTLKEMIGYIEILLKNGFAYEIADDGIYFDTAKDAEYLSLSGKFDTEAN-VARVESNL 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV----FDIHGGGLD 239
K++ DF+LWK E +ESP+GRGRPGWH EC AM +L DIH GGLD
Sbjct: 172 QKEDKKDFVLWKF---DEKWYESPFGRGRPGWHTECVAMIKKHLSSGEKFEIDIHAGGLD 228
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE AQ CA+ + A W+HNGF+ + KMSKS GN + + LE
Sbjct: 229 LLFPHHENEAAQCRCAEH-KNLAKYWLHNGFIQVNNEKMSKSLGNSFFVKDALERNL--- 284
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------KGIIDP 349
+R ++ +HYR +F+ L A+ L K +
Sbjct: 285 ----GEAVRFYLISSHYRANFNFSEDDLNAAKKRLDKIYRLKKRVLGAAANLSANDKFKS 340
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIEVCK 398
+SA+ +DLNT A+ ++ + R + K ++ A +LGI
Sbjct: 341 DFMSAMGDDLNTSKALASVDEFVRSANDELDANPKDKAKKSEIAANLELIARVLGILQVD 400
Query: 399 --EHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E+ +S IE L+ +R K + +D IR L + G L D + +
Sbjct: 401 VFEYFQFGVSDEKRAYIEDLINQRNEAKAAKNYELSDKIRDMLAANGISLMDTLSGCMWE 460
Query: 453 R 453
+
Sbjct: 461 K 461
>gi|302817808|ref|XP_002990579.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
gi|300141747|gb|EFJ08456.1| hypothetical protein SELMODRAFT_131888 [Selaginella moellendorffii]
Length = 492
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 176/506 (34%), Positives = 239/506 (47%), Gaps = 81/506 (16%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R+ F+ + MYVCG T YD++HIG+AR + FDVLYR + E VTYVR
Sbjct: 1 MSREKEVFRPRIHGKLSMYVCGVTAYDYSHIGHARVYVFFDVLYRYFTFMGYE--VTYVR 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TDIDDKII+RA + D ++++ +F +D L CLAP+ +PR + +I
Sbjct: 59 NFTDIDDKIIKRAN------DLGDDPIELSNRFCDEFRRDMASLRCLAPSLEPRVSRNID 112
Query: 131 QMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYH 184
Q+I +I I+ +G+ Y N ++ F RK+D+ + G RV
Sbjct: 113 QIIKMISQILENGYGYVLDNGDVYFSLDKFVPAFPDCYGRLSGRKLDDNRAGERVAVDDR 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DF+LWK + EP WESPWG GRPGWHIECSAMS LG FDIHGGG+DLIFPH
Sbjct: 173 KLNPGDFVLWKAN--GEPSWESPWGAGRPGWHIECSAMSGATLGSSFDIHGGGMDLIFPH 230
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEI QS A E W+HNGF+ ++ KMSKS GNF TI E+ E +
Sbjct: 231 HENEIVQSRAACH-ESNITYWMHNGFVTVDSEKMSKSLGNFFTIREVFEL-------YHP 282
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------------------- 342
+R +L THYR PI+++ +L A L QT
Sbjct: 283 LALRWFLLCTHYRSPINYSESQLQNASQRLFYLYQTLFDAKRCVEGSQKEEKSYVVSQKA 342
Query: 343 --SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------------KNHDLLPI- 384
+ + ++ S+L +DLNT I AL + + + DLL +
Sbjct: 343 AENAKALRLSLRSSLADDLNTPVTIGALSEPLKLMNELLHSKRGRKDKSRYSSLDLLRLE 402
Query: 385 FNASAHILGIEVCK------------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ +LG V + + ER K F +D IR
Sbjct: 403 VEQALEVLGFSVADYSQALFLPTCKALKRAGLTEDELLLQIHERAAARASKDFGKSDEIR 462
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWK 458
+L S G L D G T W+
Sbjct: 463 DKLSSLGISLMD-----GGGDETLWR 483
>gi|329947309|ref|ZP_08294576.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
gi|328525526|gb|EGF52570.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 170 str. F0386]
Length = 549
Score = 313 bits (803), Expect = 3e-83, Method: Composition-based stats.
Identities = 157/519 (30%), Positives = 241/519 (46%), Gaps = 84/519 (16%)
Query: 2 KKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ +++Y++ R + P + +Y+CG TV HIG+ R I FDVL R L
Sbjct: 43 EPALRLYDSAARAVVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLER- 101
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
G + V +RN+TDIDDKI+ ++ P +P + ++F L APT
Sbjct: 102 -GGQEVRLIRNVTDIDDKILSKSAAAEPPVP----WWAWAQRFEREFDAAYRALGVAAPT 156
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDE-----QK 174
++PRAT HIP+MI L+Q ++ GHAY + + +D S+P YGS + +++++ +
Sbjct: 157 YEPRATGHIPEMIDLVQRLLDAGHAYIGESGNVYYDVRSLPGYGSLTNQRLEDLATTEDE 216
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECS MS YLG F
Sbjct: 217 SQLDDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRPGWHLECSTMSRRYLGDTF 276
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGG+DL FPHHENE AQS A A W+HN ++ ++G KMSKS GN + + EL
Sbjct: 277 DIHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAEL 334
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------- 337
L + + A V+RLA+ H+R ++F+ + L +AE L +
Sbjct: 335 L-------KRYDAAVLRLALGTVHHRSTVEFSDETLADAEALWERLSSAILRAYEFSDDG 387
Query: 338 -------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------------- 376
P + +A+ DLN A+ +H +
Sbjct: 388 GANSVDAPAAQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALAKAEAGSSSSK 447
Query: 377 --------KNHDLLPIFNASAHILGIEVCKEHLN----------------KNISIAIEKL 412
DL + +LG++ E + + I+
Sbjct: 448 EADADLHESVADLALDLRSQLDVLGLDPLAEPWRTHVLDGVGSSQSGTAMETLDRLIQHD 507
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ ER K + AD +R +L G ++ED +
Sbjct: 508 LDERARARATKDWPRADALRDKLTQAGVVVEDSPSGARW 546
>gi|159041398|ref|YP_001540650.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
gi|157920233|gb|ABW01660.1| cysteinyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
Length = 500
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 168/481 (34%), Positives = 239/481 (49%), Gaps = 45/481 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I ++NT + +F+ + R YVCG T YD AH+G+AR + FD+ R L Y
Sbjct: 21 IMVFNTATKMTEQFRLMKAGVARGYVCGLTPYDEAHVGHARVAVFFDLFRRYLEYLG--I 78
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKIIE AR+E IN + S+ ++++ L P+
Sbjct: 79 NVRLVTNFTDIDDKIIEAARKEFGDDLIN-HWYEVPSRYIKKYLDYMDALYVKRAYAYPK 137
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++ M+ I ++ G+AY A+ + FD + +PNYG FS ++I+E G RV +
Sbjct: 138 VTENVQDMVKWIDELVRRGNAYVADGSVYFDVTKVPNYGEFSGQRINELIAGARVEPEPG 197
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF LWK P EP W+SPWG GRPGWH+EC MSS YLG FD HGGG DL+FPH
Sbjct: 198 KRNPLDFALWKAWKPNEPWWDSPWGPGRPGWHLECVVMSSKYLGVPFDFHGGGQDLVFPH 257
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIA + + A WIH G +N+ G KMSKS GN I I+++L + A
Sbjct: 258 HENEIAIAKVYYGLRLFARYWIHVGLVNIGGEKMSKSLGNIIPISDVLS-------KYDA 310
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------------- 349
+RL L THYR+PIDF+ + E L + +
Sbjct: 311 EAVRLYFLNTHYRKPIDFSFSGIEAMENTLRGIYASFDYLIQLMNEASEKGTSDEAVTND 370
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAH 390
+AL +D NT +A+ L L+ LL + + +
Sbjct: 371 AFKFMVNFENALNDDFNTPAAVSELINLSNYINSRIVYQPEKVSKYSISQLLNVLSYMSQ 430
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ + + +N + I L++ R L + K + +AD IR++L G +L DY
Sbjct: 431 ILGV-LNRTRINPVLVDLINTLIKVRQSLRERKLYDAADLIREELGKLGIVLGDYGGRTY 489
Query: 451 G 451
Sbjct: 490 W 490
>gi|224542354|ref|ZP_03682893.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
15897]
gi|224524736|gb|EEF93841.1| hypothetical protein CATMIT_01533 [Catenibacterium mitsuokai DSM
15897]
Length = 468
Score = 313 bits (802), Expect = 3e-83, Method: Composition-based stats.
Identities = 154/468 (32%), Positives = 230/468 (49%), Gaps = 52/468 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL K EF+ I+ + +Y+CGPTVY+ AHIGN RPMIVFDVL R Y +
Sbjct: 22 MRLFNTLTNKKEEFKPIEEGKVSIYICGPTVYNHAHIGNTRPMIVFDVLRRTFEYLGND- 80
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V N TD+DDKII+ A+ E + +T K + + L PT++PR
Sbjct: 81 -VTFVSNYTDVDDKIIKAAKAEGITE------KELTDKYIKAYEDVRAGLNIEDPTYKPR 133
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP---- 180
T +P++I IQ +I G+AYE + ++ F + + YG S K+++ G
Sbjct: 134 VTETMPEIIDFIQALIDKGYAYEVDGDVYFRVTKVKEYGMLSGIKVEDLIAGASDRTLSV 193
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH-YLGKVFDIHGGGLD 239
+ K++ DF LWK+ T +++PW +GRPGWH EC M + + DIHGGG D
Sbjct: 194 DDKKKESTTDFALWKK-TDEGIQFDTPWSKGRPGWHTECVVMINKLFKDGKIDIHGGGQD 252
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHENEIAQS + AN W+HN +N++G KMSKS GN + +L+
Sbjct: 253 LKFPHHENEIAQSMAYNG-HPIANYWMHNQMINIDGEKMSKSLGNVLWAKDLIV------ 305
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQ---------------RLTEAEILLSKWPQTSTSK 344
+ V + ML THYR P++ TV + L K
Sbjct: 306 -EFGCNVFKWLMLSTHYRNPLNLTVDVIAGVRKEVSKVENATKNASLYLQVNHVPAHDYK 364
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLL----PIFNASAHILG 393
A+++AL +DLNT A+ + + K++D++ +LG
Sbjct: 365 KETVDAMVNALEDDLNTSLALTQILDQVKVLNQVMRVREKDNDVIATEYATLVKMGDVLG 424
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
L++ L +E K K F AD +RK+L +G +
Sbjct: 425 FLFEGTKLSEED----IALYEEWNAYKKEKNFDEADRVRKELTERGIL 468
>gi|319937669|ref|ZP_08012072.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
gi|319807104|gb|EFW03718.1| cysteinyl-tRNA synthetase [Coprobacillus sp. 29_1]
Length = 445
Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 226/466 (48%), Gaps = 50/466 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL K EF I + +YVCGPTVYD AHIGNARP+IVFD+L R Y
Sbjct: 1 MKVFNTLTNKKEEFVPIKQGEVSIYVCGPTVYDHAHIGNARPLIVFDILRRTFEYLGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+V N TD+DDKII+ A++E + +T K + + + L L PT+ PR
Sbjct: 59 KVTFVSNFTDVDDKIIKAAKEEGITE------KELTDKYIKAYNDIRSGLNLLFPTYSPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + +I IQ+++ G AYE + ++ F + I YG S K+++ G +
Sbjct: 113 VTETMQPIIDFIQSLVDQGFAYEVDGDVYFRVTKINEYGMLSGIKVEDLIAGASERVDEN 172
Query: 185 KKNPA--DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLI 241
K + DF LWK+ T +ESPW +GRPGWH EC M + DIHGGG DL
Sbjct: 173 DKKESSTDFALWKK-TDEGIQFESPWSKGRPGWHTECVVMINDIFDDGRIDIHGGGQDLK 231
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS AN+W+HN +N++ +KMSKS GN + +L+ET
Sbjct: 232 FPHHENEIAQSMACHH-HPIANVWMHNQMINIDNQKMSKSLGNVLWAKDLIETL------ 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQ---------------RLTEAEILLSKWPQTSTSKGI 346
V + ML THYR P++FT + + L + Q
Sbjct: 285 -GCNVFKWLMLSTHYRNPLNFTEEVLTSVKKEVEKVENVLKQTSLYLQVQHYQQEEYSKE 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGIE 395
++ AL +DLNT A+ + + ++ + ++G
Sbjct: 344 TVDTMVEALSDDLNTSLALTQILNQVKVLNQSMRVKDKDNQVISREYQTLIQMLDVMGFV 403
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ L+ N + L ++ L K F AD +R QL+ +G I
Sbjct: 404 HEMKQLSDNDIV----LYEKWLEEKANKNFDKADELRGQLQMRGII 445
>gi|330834076|ref|YP_004408804.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566215|gb|AEB94320.1| cysteinyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 466
Score = 313 bits (802), Expect = 4e-83, Method: Composition-based stats.
Identities = 158/482 (32%), Positives = 239/482 (49%), Gaps = 53/482 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++NTL R+I F +P ++RMYVCGPTVYD HIG+ R + FD + R LR
Sbjct: 1 MLRVFNTLGRRIDSFIPNEPHSVRMYVCGPTVYDEVHIGHGRTFVSFDAISRYLRLKGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V+NITDIDDKII +A+ + + + ++ T+ +++ L P
Sbjct: 60 -NVIRVQNITDIDDKIINKAK------SVGKSWNEVSEYYTKSYLEMINLLKVK-IDIHP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ ++HI ++I +Q +I GHAY AN + FD + P YG S + +E G + ++
Sbjct: 112 KVSSHIKEIIDFVQGLIDRGHAYVANGSVYFDVDTYPKYGELSNIRKEEWDQGEEIVKE- 170
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK P EP W+SPWG+GRPGWHIECS MS+ YLG DIHGGG+DL+FP
Sbjct: 171 -KKNPYDFALWKAYKPGEPFWDSPWGKGRPGWHIECSTMSTRYLGTKIDIHGGGIDLVFP 229
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ + W+H FL ++ KMSKS GN I + E + +
Sbjct: 230 HHENERAQTESITN-DTWVKYWMHVAFLTIKKEKMSKSKGNIIPLKEAIA-------KYG 281
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
+R L +HYR PI+++ L ++ L + + I
Sbjct: 282 PSTLRYWFLSSHYRNPIEYSDDVLEQSAKSLQRLKDAVSILRKIILEGPQHYAKESEIKT 341
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLAR----ESTKNHDLLPI------FNASAH 390
+A+ +D NT +A+ A+H+LA + + D+L F
Sbjct: 342 QAEIFGAILNFDNAMEDDFNTANALTAIHELASIVFTKLQYSQDVLGAIMALDGFRKFND 401
Query: 391 ILGI-EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ + + IS I +++ R L + + + +D IR+ L G + D K
Sbjct: 402 VFAVMDEEFSSEMDRISSIINSVIEIRNYLRERQMYELSDKIRESLMKAGIKVLDSKEGS 461
Query: 450 NG 451
Sbjct: 462 TW 463
>gi|283769304|ref|ZP_06342204.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
gi|283104080|gb|EFC05463.1| cysteine--tRNA ligase [Bulleidia extructa W1219]
Length = 443
Score = 313 bits (801), Expect = 4e-83, Method: Composition-based stats.
Identities = 160/464 (34%), Positives = 229/464 (49%), Gaps = 48/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT +I EF+ + +YVCGPTVY++AHIGNARPM+VFDVL R+
Sbjct: 1 MKLYNTKTLEIEEFKPRKEGEVSLYVCGPTVYNYAHIGNARPMVVFDVLKRVFEAIG--L 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII +A +E S I ++ Q + +L P H PR
Sbjct: 59 KVNYVSNYTDVDDKIIHKALEEGVSEE------EIANRYIQAYEDLRKQLNIEQPDHCPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + +I I+ + GHAYE N ++ F S+ YGS S + ++E G R+ E
Sbjct: 113 VTHTMDSIISFIKGLQDQGHAYEVNGDVYFSVDSVSEYGSLSHQNLEELDAGNRIAENEQ 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK+ T WESPWG+GRPGWH EC M + LG+ DIHGGGLDL FPH
Sbjct: 173 KKNPLDFTLWKK-TDKGIQWESPWGKGRPGWHTECVVMINENLGQTIDIHGGGLDLKFPH 231
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ E A+ W+HN +N++G KMSKS GN + ++ +
Sbjct: 232 HENEAAQQRAMFGHE-LADHWMHNAMVNIDGEKMSKSLGNTLWAMDVT-------KELGT 283
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------------KGIID 348
+ R + HYR+ ++F+ + + A+ L K +
Sbjct: 284 NLTRWLISSVHYRKELNFSDETIQAAKTELEKILMAVHNATLKVKFADVEWNFSVDTPSF 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGIEVC 397
+ + NDLNT +A + + +E + +LGI++
Sbjct: 344 DRFIKQMENDLNTPNAYTVIFETVKELNASIRQKEPDYTRIMGLVNSIEKMMDVLGIKLE 403
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
K ++K +++ Q L K + F AD R L+ KG I
Sbjct: 404 KVVVSKED----KQIYQAWLAAKKERNFDQADQYRNILQEKGLI 443
>gi|331699815|ref|YP_004336054.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
gi|326954504|gb|AEA28201.1| cysteinyl-tRNA synthetase [Pseudonocardia dioxanivorans CB1190]
Length = 482
Score = 312 bits (799), Expect = 7e-83, Method: Composition-based stats.
Identities = 154/487 (31%), Positives = 227/487 (46%), Gaps = 69/487 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++++T R+ +F + + MYVCG TV HIG+ R + +DVL R L Y +
Sbjct: 20 SLRLHDTATREQRDFVPLRAGTVSMYVCGATVQGVPHIGHVRSSLNYDVLRRWLTYSGHD 79
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V VRN+TDIDDKI+ +A + + + F L CL + +P
Sbjct: 80 --VLLVRNVTDIDDKILRKAADAG------RPWWEWAATHERAFSAAYDALGCLPASAEP 131
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT H+ QM+ LI +I GHAY A ++ F S P YGS S +K+D+ G
Sbjct: 132 RATGHVTQMVDLIARLIDRGHAYAAGGDVYFAVRSFPEYGSLSGQKVDDVAQGEGDCGD- 190
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK + P EP W +PWG GRPGWH+ECSAM++ YLG FDIHGGGLDL+FP
Sbjct: 191 -KRDPLDFTLWKGAKPGEPSWPTPWGAGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFP 249
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQS A A W+HN ++ + G KMSKS GN ++I +L+ +
Sbjct: 250 HHENEQAQSHAAGDG--FARYWLHNAWVTMGGEKMSKSLGNTLSIPAMLQRVR------- 300
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------IDPAVLS 353
+R ++ HYR I+++ L+E+ + + A +
Sbjct: 301 GVELRYYLVGPHYRSSIEYSDAALSESVSAYRRIEGFLGRVTERAGTPGVAAEVPAAFAA 360
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLN-- 402
AL +DL T A+ +H RE D A +LG++ E
Sbjct: 361 ALDDDLGTPGALAVVHNTVREGNSALDAGDHAAAVRAAESVRAMTGVLGLDPLDEKWAGG 420
Query: 403 -------KNISIAIEKLVQERLI-----------LLKMKKFSSADYIRKQLESKGFILED 444
+ ++ L+Q R +R +L + G +ED
Sbjct: 421 GSDTAALGALGSLVDDLLQRRQEARAARDFAAAD-----------EVRDRLTAAGISVED 469
Query: 445 YKNPDNG 451
+ +
Sbjct: 470 GPDGPSW 476
>gi|329765327|ref|ZP_08256907.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138233|gb|EGG42489.1| cysteinyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 463
Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats.
Identities = 174/483 (36%), Positives = 246/483 (50%), Gaps = 54/483 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ +TL + +++Y+CG TVYD +HIG+AR +IVFDVL + L E
Sbjct: 1 MKLQDTLSNSVQTLD--ISKEVKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESKGIE- 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++N TD+DDKII RA+ E N I+SK + + KD L ++ P+
Sbjct: 58 -VNFIQNFTDVDDKIINRAKLE------NTTAEQISSKYIENYYKDFDGLNVKRASNYPK 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HI + I+ +I AY + N + F S YG S++KIDE + G R+
Sbjct: 111 ATEHIKDIENFIEKLIQKDIAYVSKNGVYFSVSKFSQYGKLSKKKIDELQSGARIEVDEA 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KK+P DF LWK + ++P W+SPWG+GRPGWHIECSAMS YLG+ FDIHGGG DLIFPH
Sbjct: 171 KKDPLDFALWK-FSNVKPIWDSPWGKGRPGWHIECSAMSIKYLGENFDIHGGGRDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS ++ A IW+H G + + G KMSKS GN +I +L+ +W
Sbjct: 230 HENEIAQSESFT-SKQFAKIWMHVGMVTINGEKMSKSLGNIRSIKHVLD-------NWGP 281
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTE----AEILLSKWPQTSTSKGIIDPAVLSAL----- 355
VIRL L HY +PID++ + L E + + + + ++
Sbjct: 282 NVIRLFCLSGHYSKPIDYSEELLKENLTKWRQAEICFYELIHANNENSNTDIKSIIEKTS 341
Query: 356 -------YNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGIEVC 397
+DLNT A+ + KL +E ++P ILG+ +
Sbjct: 342 REFNNALESDLNTHLALSSFFKLIKEINYLAAEEKISKKHAESVIPELERMMKILGLVIP 401
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + I ++ ER L K KKF AD IR +L L D+K T W
Sbjct: 402 K--ITHEEKQEINNMISEREQLRKEKKFQDADKIRDRLNEMNIELIDHKGK------TIW 453
Query: 458 KQK 460
+K
Sbjct: 454 ARK 456
>gi|294637579|ref|ZP_06715861.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
gi|291089250|gb|EFE21811.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
Length = 363
Score = 312 bits (799), Expect = 8e-83, Method: Composition-based stats.
Identities = 151/379 (39%), Positives = 217/379 (57%), Gaps = 26/379 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGEVGMYVCGVTIYDLCHIGHGRTFVCFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRN+TD+DDKII+RA + ++ +T + + +D L P +P
Sbjct: 60 -TLKYVRNVTDVDDKIIKRALENK------ESCEQLTERMLAEMHRDFDALNIARPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L++ +I GHAY +N +++F + P+YG SR+ +++ + G RV
Sbjct: 113 RATHHIAEIIALVEQLIARGHAYVASNGDVMFAVDTDPDYGLLSRQDLEQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 EVKRNPMDFVLWKMSKPGEPSWPSPWGEGRPGWHIECSAMNCKQLGSHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHDGA-YVNYWMHSGMVMIDREKMSKSLGNFFTIRDVLA-------HY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STSKGIIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + + +
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAALERLYTALRGTDATAQPAADEAFEGRFRA 344
Query: 354 ALYNDLNTVSAIQALHKLA 372
A+ +D NT A L +A
Sbjct: 345 AMDDDFNTPEAYSVLFDMA 363
>gi|167586800|ref|ZP_02379188.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 407
Score = 312 bits (799), Expect = 9e-83, Method: Composition-based stats.
Identities = 159/396 (40%), Positives = 223/396 (56%), Gaps = 31/396 (7%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F P +RMYVCG TVYD+ H+G+AR ++VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQVFVPRQPGEVRMYVCGITVYDYCHVGHARMLVVFDLVQRWLRAV 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GY--RVTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFIAAMHEDEDALGIQRPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ + ++ + NYG S + +D+ + G RV
Sbjct: 112 IEPRATHFIPQMLGMIETLEANGYAYQANDGDVNYSVRKFANYGKLSGKSLDDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWKR+ P +P W+S +G GRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKRAKPEDPEGASWDSKYGAGRPGWHIECSAMGCTLLGEHFDIHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENEIAQS A + N WIHNGF+ ++ KMSKS GNF TI ++LE
Sbjct: 232 GQDLQFPHHENEIAQSEGATG-QTFVNYWIHNGFVQVDNEKMSKSLGNFFTIRDVLE--- 287
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------TSTSKGI 346
+ A V+R ++ THYR P++++ L +A L++
Sbjct: 288 ----QYDAEVVRFFIVRTHYRSPLNYSDVHLDDARAALTRLYTALKDVAPDAAALDWNEP 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+A+ +D NT A+ L +LA E + D
Sbjct: 344 HAQRFAAAMNDDFNTSLAVSVLFELAGEVNRTRDAA 379
>gi|304390348|ref|ZP_07372301.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304326104|gb|EFL93349.1| cysteine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 506
Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+++ ++ +F + P + +Y+CGPTV H+G+ R + FDVL R LR
Sbjct: 1 MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI+ ++ + + ++F L + PT P
Sbjct: 59 AVTYVRNVTDIDDKILAKSAAAGV------PWWELAAHFEREFDFAYRALNTVPPTVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I LI+ ++ GHAY + N + F +S+P+YG+ + + + E +
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 TATETGKRDPRDFALWKAAKDDEPSDATWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE+AQS A A W+HN +L L+G KMSKS GN + + LLE
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
W V+R++++ THYR ++++ L +A +L K+
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETAAP 343
Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
Q + + ++AL +DLN A+ ALH+ + +
Sbjct: 344 EVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403
Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
+T A + G++ N +++ + L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTALLQ 463
Query: 415 ERLILLKMKKFSSADYIRKQL 435
+R + + AD IR L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484
>gi|298345949|ref|YP_003718636.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
gi|298236010|gb|ADI67142.1| cysteine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
Length = 506
Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+++ ++ +F + P + +Y+CGPTV H+G+ R + FDVL R LR
Sbjct: 1 MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI+ ++ + + ++F L + PT P
Sbjct: 59 AVTYVRNVTDIDDKILAKSAAAGV------PWWELAAHFEREFDFAYRALNTVPPTVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I LI+ ++ GHAY + N + F +S+P+YG+ + + + E +
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 TATETGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE+AQS A A W+HN +L L+G KMSKS GN + + LLE
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
W V+R++++ THYR ++++ L +A +L K+
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLLQVPRSVPAETAAP 343
Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
Q + + ++AL +DLN A+ ALH+ + +
Sbjct: 344 EVRNVYGDVNPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403
Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
+T A + G++ N +++ + L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSAAETPGTAPNPTETPNDSLTALVTALLQ 463
Query: 415 ERLILLKMKKFSSADYIRKQL 435
+R + + AD IR L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484
>gi|27904909|ref|NP_778035.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
gi|27904307|gb|AAO27140.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Bp (Baizongia
pistaciae)]
Length = 469
Score = 312 bits (798), Expect = 1e-82, Method: Composition-based stats.
Identities = 163/478 (34%), Positives = 223/478 (46%), Gaps = 44/478 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+KI+N+ R + + I MYVCG T YDF HIG+ R I FDV+ R LR
Sbjct: 4 NTMLKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSLG 63
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ YVRNITDIDDKII + + N++ ++++ D + L L P
Sbjct: 64 Y--ALKYVRNITDIDDKIIAASLKN------NESYISLSNRMISNMKDDFSALNILPPDS 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T +I +I I ++ HAY N +I+F SS NYG+ S + +
Sbjct: 116 EPRVTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINIS 175
Query: 181 EKYHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KKN ADF LWK S GW SPWG GRPGWHIECS+M DIHGGG+D
Sbjct: 176 HYSTKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVD 235
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHENE+AQS C D W+H G + + KMSKS N + + +LL
Sbjct: 236 LLFPHHENELAQSVCIDSNFS-IKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDP 349
+ + +IR +L THYR P+ F + L+ + LL K +
Sbjct: 289 -QYDSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKT 347
Query: 350 AVLSALYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL 401
A+ +D NT A+ L +L++E K L ILGI +
Sbjct: 348 DFYKAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEY 407
Query: 402 --------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
N +I I L+ ER ++K + AD IRK+L G +LED
Sbjct: 408 FLQNNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLEDTSFNTFW 465
>gi|51473263|ref|YP_067020.1| cysteinyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
gi|61216180|sp|Q68XV4|SYC_RICTY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|51459575|gb|AAU03538.1| Cysteine translase [Rickettsia typhi str. Wilmington]
Length = 457
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 184/474 (38%), Positives = 264/474 (55%), Gaps = 33/474 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YNTL R F D +N++MYVCGPTVYD HIGN+R ++V+D+LYR++ +G
Sbjct: 1 MQLHLYNTLTRTKEVFNPQDHANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIIIKIFG 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+K V YVRNI + + + I+ +T+K T++F + L C+ P+ +
Sbjct: 61 KKAVKYVRNI------TDIDDKIIDRAESLGININDLTNKVTREFHINMAYLGCMLPSIE 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT HI MI +I+ +I HAY +N + FD S PNY S R ++E G R+
Sbjct: 115 PKATEHIDVMIEIIERLIAQDHAYITDNHVYFDVLSAPNYTELSNRNLEEMFEGVRIENS 174
Query: 183 YHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KKNP DF+LWK + EP + SPWG GRPGWHIECSAMS YLG+ FDIHGGG D
Sbjct: 175 KTKKNPQDFVLWKPAKQNEPKNVNFSSPWGLGRPGWHIECSAMSYKYLGENFDIHGGGAD 234
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHH NEIAQS CA A WIHNGFL + G KMSKS GNFIT+ +L++
Sbjct: 235 LIFPHHTNEIAQSRCAFPSSTYAKYWIHNGFLTVNGEKMSKSLGNFITVRDLMD------ 288
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLSAL 355
+ V+RL +L +HYR P+D+ + + +A+ L W + + + +L
Sbjct: 289 KQIQGEVVRLFLLSSHYRRPLDYNDKAIDDAKKTLDYWYRAIKEINVQKVDLPSDFMQSL 348
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLP------IFNASAHILGI--EVCKEHLNKNISI 407
++D+NT AI+ ++ A+ + A+ +G+ + E N +I
Sbjct: 349 FDDMNTPLAIKIINDYAKGVFISKTEAERKFNASAIITCANFIGLMRKTQYEWFNNDIDK 408
Query: 408 A-IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
I +L+ +RL K K + AD IR QL K ILED + T W+++
Sbjct: 409 LYINELINKRLKAKKQKNWLLADKIRNQLLEKKIILEDKSDCT-----TIWRKE 457
>gi|257077300|ref|ZP_05571661.1| cysteinyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
Length = 456
Score = 311 bits (797), Expect = 1e-82, Method: Composition-based stats.
Identities = 157/468 (33%), Positives = 238/468 (50%), Gaps = 41/468 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
I+NTL +K +F+ + P I M+VCGPTVYD +HIG+AR I FDV+ + LR V
Sbjct: 3 IHNTLGQKDEDFKPMHPGRINMFVCGPTVYDHSHIGHARTNIFFDVIAKYLRARGY--SV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y++NITDIDDKII RA +E S + +++ + +L + + RA+
Sbjct: 61 FYLQNITDIDDKIINRAAEEGKK------YSEVADHYFEEYKEIMGKLRIDSINYYARAS 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+I ++I I+ I+ HG+AYE + + F+ +YG S + +D+ + R K KK
Sbjct: 115 LYIDEIIGQIKKIMEHGYAYETADGVYFNVRKFSDYGELSNQNMDQIRENARGVIKEEKK 174
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+P DF+LWK+ P EP WESPWG+GRPGWHIE +A++ Y G +DIHGGG DLIFPHHE
Sbjct: 175 SPEDFVLWKKMKPGEPFWESPWGKGRPGWHIEDTAITEAYFGSEYDIHGGGNDLIFPHHE 234
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
EIAQ A WIH G +N+ KMSKS NFI ++L +S+
Sbjct: 235 AEIAQMRSVSGKRYLARYWIHTGMVNINKEKMSKSLKNFIQTKDIL-------KSYKPEE 287
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------SKGIIDPAVL 352
+R AM+ ++Y ID++ Q + ++ + + I
Sbjct: 288 LRFAMINSNYNTVIDYSAQLMESSKDAVERINIFYNKMKELNSTEGSYNIDAEEIINHFN 347
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHLNK 403
+ + + +T S I+ ++ KN + L+ I L I K++
Sbjct: 348 AVMDKNFDTRSLIREFLAFISDANKNMENISSAAASKLIHIVEYVDSFLNIIYRKQNQES 407
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
NI ++ ++ R K ++ +DYIRK+LE +ED N
Sbjct: 408 NI---MDIIIDIRNHARSQKDYAISDYIRKKLEENNIYIEDNGNKTIW 452
>gi|315657556|ref|ZP_07910438.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492028|gb|EFU81637.1| cysteinyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 506
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 158/501 (31%), Positives = 240/501 (47%), Gaps = 87/501 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+++ ++ +F + P + +Y+CGPTV H+G+ R + FDVL R LR
Sbjct: 1 MKIFDSATHEVRDFVPVTPGKVGLYLCGPTVQGAPHLGHLRAALNFDVLVRWLRRRGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI+ ++ + + ++F L + PT P
Sbjct: 59 AVTYVRNVTDIDDKILAKSAAAGV------PWWELAAHFEREFDFAYRALNTVPPTVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I LI+ ++ GHAY + N + F +S+P+YG+ + + + E +
Sbjct: 113 ATGHIPQQIALIERLLERGHAYSDTNGNVYFSVTSLPDYGALTNQPVSELASTEDESQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 TATEAGKRDPRDFALWKAAKDDEPSDAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE+AQS A A W+HN +L L+G KMSKS GN + + LLE
Sbjct: 233 GGLDLRFPHHENEMAQSHGAGWG--FARYWMHNAWLTLKGEKMSKSVGNVVGVRRLLED- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------------ 337
W V+R++++ THYR ++++ L +A +L K+
Sbjct: 290 ------WDPAVVRMSVVTTHYRTNLEYSEDSLKQAALLWDKFTSFLQQVPRSVPAETAAP 343
Query: 338 --------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR---------E 374
Q + + ++AL +DLN A+ ALH+ + +
Sbjct: 344 EVRNVYGDVDPDLARQRELAAVELPDDFVAALDDDLNVPGALPALHRTLKTGKAALNSGD 403
Query: 375 STKNHDLLPIFNASAHILGIEVCKEHL--------------------NKNISIAIEKLVQ 414
+T A + G++ N +++ + L+Q
Sbjct: 404 TTGAQQEALQLRAMLDVFGLDPHDPAWVASVSATETPGTEPNPTDTPNDSLTALVTALLQ 463
Query: 415 ERLILLKMKKFSSADYIRKQL 435
+R + + AD IR L
Sbjct: 464 QRGEAKAQRDWGRADAIRDLL 484
>gi|269839611|ref|YP_003324303.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269791341|gb|ACZ43481.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 785
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 146/478 (30%), Positives = 223/478 (46%), Gaps = 45/478 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNTL R++ E ++P IRMY CGPTVY + HIGN R D + R L E
Sbjct: 1 MRLYNTLTRRVEEVVPVEPGRIRMYTCGPTVYRYIHIGNLRSFCTADWIRRALLREGYE- 59
Query: 65 CVTYVRNITDI-----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V +V+NITD+ +DK+ AR+ + I T+ F++D R
Sbjct: 60 -VIHVKNITDVGHMRQELLDQGEDKLEAEARR------VGRTPGEIAEFYTRAFMRDEAR 112
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
+ L + PRAT H+ +MI +++ + G+AY A + FD + +P YG S + E
Sbjct: 113 MNILPASVFPRATQHVGEMIEIVRELERQGYAYRAGGNVYFDVARLPQYGQLSGNSLPEL 172
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++P DF LWK + P W+SPWGRG PGWHIEC+AM+ YLG D
Sbjct: 173 TSSQEDATA-DKRSPLDFALWKEAEPGRLMAWDSPWGRGFPGWHIECTAMAIKYLGTEID 231
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+D IFPHHENE AQS + W+H L +G KMSKS N T+++++
Sbjct: 232 IHTGGVDNIFPHHENERAQSEAYVG-HRWVRHWVHTQHLLTDGLKMSKSMSNDYTLDDIV 290
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------STS 343
R + +R HYR ++FT + L A+ L + +
Sbjct: 291 A------RGFEPLALRYLFTTAHYRTRLNFTFRALAGAQTSLRRLRMAALAARDEAVAPP 344
Query: 344 KGIIDPAVLSALY----NDLNTVSAIQALHKLA-RESTKNHDLLPIFNASAHILGIEVCK 398
A +DLN +A+ + + R + + +LG++V
Sbjct: 345 DEEAMRPWREAFDRSLRDDLNLPAAMAVVWDVVRRSGLGPAERAALLAEFDEVLGLDVFA 404
Query: 399 EHLNKNISI---AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
E + + + +L+ R + ++ AD +R LE++G L D + R
Sbjct: 405 EPDSGLLLEPRQDVRELLALRAEVRARGDYALADALRSDLEARGVELRDTRQGTRAYR 462
>gi|29427401|sp|P59421|SYC_BUCBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 464
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 163/476 (34%), Positives = 223/476 (46%), Gaps = 44/476 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+N+ R + + I MYVCG T YDF HIG+ R I FDV+ R LR
Sbjct: 1 MLKIFNSYTRLQEQLEVDKKKTINMYVCGITAYDFCHIGHGRTFIFFDVVVRYLRSLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII + + N++ ++++ D + L L P +P
Sbjct: 60 -ALKYVRNITDIDDKIIAASLKN------NESYISLSNRMISNMKDDFSALNILPPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T +I +I I ++ HAY N +I+F SS NYG+ S + +
Sbjct: 113 RVTENISDIIKFISILLNKKHAYVACNGDIMFSVSSYLNYGALSNQFSKILNKEINISHY 172
Query: 183 YHKKNPADFILWKRSTPM-EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KKN ADF LWK S GW SPWG GRPGWHIECS+M DIHGGG+DL+
Sbjct: 173 STKKNIADFALWKTSKSSIFVGWNSPWGNGRPGWHIECSSMCRSAFKNKIDIHGGGVDLL 232
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS C D W+H G + + KMSKS N + + +LL
Sbjct: 233 FPHHENELAQSVCIDSNFS-IKHWMHTGLVIINNEKMSKSLNNTLLLRDLLT-------Q 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAV 351
+ + +IR +L THYR P+ F + L+ + LL K +
Sbjct: 285 YDSEIIRFFLLSTHYRHPLYFCYKNLSNSSKLLKKLYLSLRGVDFDIKGLDIVDNFKTDF 344
Query: 352 LSALYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL-- 401
A+ +D NT A+ L +L++E K L ILGI +
Sbjct: 345 YKAMNSDFNTPLALSILLRLSKEINKFKLIDSNKASQLASKLRQLGSILGILLKDPEYFL 404
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
N +I I L+ ER ++K + AD IRK+L G +LED
Sbjct: 405 QNNFNCNNSIIGKINSLIYERDKARRVKDWVRADRIRKELLELGIVLEDTSFNTFW 460
>gi|254444496|ref|ZP_05057972.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
gi|198258804|gb|EDY83112.1| cysteinyl-tRNA synthetase [Verrucomicrobiae bacterium DG1235]
Length = 475
Score = 311 bits (796), Expect = 2e-82, Method: Composition-based stats.
Identities = 162/489 (33%), Positives = 243/489 (49%), Gaps = 52/489 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K++ +NTL RK + + MY CGPTVY AHIGN R + DV+ R+L+
Sbjct: 1 MKQVTFHNTLSRKAEPIVPTKGNVVGMYCCGPTVYAQAHIGNFRTFLAQDVMRRVLQTAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +VRNITD+DDK I R+ +E ++ T TQ F D R LAP
Sbjct: 61 Y--KVIHVRNITDVDDKTIARSIEEG------RQLTEFTEHWTQIFHADCERFNMLAPQI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDE------QK 174
+P+AT HI + I +I+ +I GHAY + + F SS YG SR K +
Sbjct: 113 EPKATEHIAEQIAMIEQLIQRGHAYASDDGSVYFRVSSFDEYGKLSRLKERQLLTDAPAN 172
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
++Y + + ADF++WK P + W+SPWG+GRPGWH+ECSAM+ YLG D
Sbjct: 173 DTPVDSDEYTRDSAADFVMWKSRKPTDGDVYWDSPWGQGRPGWHLECSAMAMKYLGNNLD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
IH GG+DL FPHHENEIAQS C+ E K WIH L ++G+KMSKS NF T++++
Sbjct: 233 IHSGGVDLTFPHHENEIAQSECSCGHEKKFFKYWIHAAHLLVDGQKMSKSLDNFYTVDDI 292
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------- 340
+ +P V+R A+ YR+ I+FT+ L A+ L + +
Sbjct: 293 ------AAKGYPPVVLRYALTSGAYRQTINFTLDTLGAAQSALVRLKKFSDELLAEAGLK 346
Query: 341 -----------STSKGIIDPAVLSAL--YNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
DP + +D+N A+ A+ + L+P F+
Sbjct: 347 RASVLKEIAKGKHLHDDWDPFADAWKKLTHDMNIAGALGAIFTAIKAKPGPEALIP-FHK 405
Query: 388 SAHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LG ++ + E ++ I+ L Q+R + K +++AD +R +L + G+ D
Sbjct: 406 LIFALGYDLDQVVIEKPKVDVPEDIKILAQKRWDAKQAKDWATADALRDELAAAGWKALD 465
Query: 445 YKNPDNGQR 453
K+ + ++
Sbjct: 466 RKDGFDLEQ 474
>gi|257459527|ref|ZP_05624636.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
gi|257442952|gb|EEV18086.1| cysteinyl-tRNA synthetase [Campylobacter gracilis RM3268]
Length = 476
Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats.
Identities = 151/491 (30%), Positives = 230/491 (46%), Gaps = 62/491 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY++L +K F+ I +R+Y CGPTVYD AH+G+A+ + FD+L R+L+ E
Sbjct: 1 MVIYDSLSKKKLPFKPISDGLVRIYACGPTVYDDAHLGHAKSAVSFDLLRRVLQAEGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q S+ IT T+++++D + L + P+
Sbjct: 60 -VKFARNFTDIDDKILKKMEQSGKSLE------EITEFYTRRYLQDMSALNVADASISPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT +I + LI +++ G AYE + I FDT +Y S S +K K RV
Sbjct: 113 ATENIAAICELISSLLQKGFAYEIAGDGIYFDTRKDGDYLSLSGKKEGAGKNIARVASND 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
K + DF+LWK E ++SP+G+GRPGWH EC AM +L DIH GG
Sbjct: 173 AKHDEKDFVLWKF---DENWFDSPFGKGRPGWHSECVAMILAHLDSGDPQFCIDIHAGGA 229
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ CA + W+HNGF+ + KMSKS GN + + L
Sbjct: 230 DLLFPHHENEAAQCRCARHRA-LSKYWLHNGFVQVNNEKMSKSLGNSFFVGDAL------ 282
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------- 347
+ P +R +L +HYR +++V L ++ L K + I
Sbjct: 283 -KIAPGEALRFYLLSSHYRANFNYSVTDLLASKKRLDKIYRLKKRVRDILTPVAGQNSAP 341
Query: 348 ---------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ L +DLNT A+ L + + D +
Sbjct: 342 KLPAAEVKFRSEMMEFLSDDLNTSGALAVLDSFVASANEALDRAPKDKALKARIAANLEF 401
Query: 388 SAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ LGI E +++ IE+L+++R K F+SAD IR +L
Sbjct: 402 AKQTLGILYEDETEYFRFGVSEQQRAQIEELIKQRAQAKAEKDFASADAIRARLTDMKIE 461
Query: 442 LEDYKNPDNGQ 452
+ D + +
Sbjct: 462 VMDTTSGTVWE 472
>gi|294055072|ref|YP_003548730.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
gi|293614405|gb|ADE54560.1| cysteinyl-tRNA synthetase [Coraliomargarita akajimensis DSM 45221]
Length = 478
Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats.
Identities = 159/487 (32%), Positives = 240/487 (49%), Gaps = 56/487 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + +R Y CGPTVY AHIGN R ++ D L R+L
Sbjct: 1 MSVQLYDTHSRSLQTLAPEGDQPLRFYCCGPTVYGPAHIGNFRTFLIQDTLRRVLEVD-- 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +VRNITD+DDK I R+++E S+ T+K T++F D L L+P+ +
Sbjct: 59 NTPVKHVRNITDVDDKTIRRSQEEGMSLGS------FTAKWTEKFHADCEALNMLSPSIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
P A HIPQ I L++ ++ GHAY + + F SS NYGS S+ K E +
Sbjct: 113 PSAVEHIPQQIALVEKLVEKGHAYATDDGSVYFRVSSFANYGSLSKLKQRELQTQNENSA 172
Query: 178 ---RVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSS-HYLGKVF 231
++Y +++ DF LWK P + W SPWG GRPGWH+ECSAM + G+
Sbjct: 173 GEVNDADEYDRESVTDFALWKGRKPEDGDNYWSSPWGEGRPGWHLECSAMVDSAFDGETI 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
++HGGG+DL FPHHENEIAQS CA W H+ L +EG KMSKS GN T+++L
Sbjct: 233 ELHGGGIDLCFPHHENEIAQSECAHG-HAFCKHWFHSAHLMVEGAKMSKSLGNLYTLDDL 291
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------------ 339
E + + V+R ++ YR+ ++FT L +E + K +
Sbjct: 292 RE------KGFNPMVVRYTLIAGSYRQQLNFTFDGLHASESAILKLERFAESLLAKTGEE 345
Query: 340 ----TSTSKGIIDPAV------LSALYNDLNTVSAIQALHKLAR-------ESTKNHDLL 382
AL N+LNT + + A+ + +++ +LL
Sbjct: 346 TTALADYISKEAPADFGRFGKAWDALRNNLNTAACLGAIFGVIGSNPAATLDASGARELL 405
Query: 383 PIFNASAHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ + + LG+ + E + I L Q+R K K + AD +R QL ++G+I
Sbjct: 406 KAYGSLLYALGLNLFTAEEKQVDAPAEIVALAQQRWEAKKAKDWGKADELRDQLLTQGWI 465
Query: 442 LEDYKNP 448
++D K+
Sbjct: 466 VKDSKDG 472
>gi|189502029|ref|YP_001957746.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
5a2]
gi|189497470|gb|ACE06017.1| hypothetical protein Aasi_0619 [Candidatus Amoebophilus asiaticus
5a2]
Length = 495
Score = 310 bits (793), Expect = 4e-82, Method: Composition-based stats.
Identities = 163/504 (32%), Positives = 233/504 (46%), Gaps = 65/504 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YN+L R+ F +P + MYVCGPTVY AH+G+AR + FDV+ R L +
Sbjct: 1 MHNSLQVYNSLTRQQETFTPTNPPYVGMYVCGPTVYGPAHLGHARCYVTFDVIQRYLTHL 60
Query: 61 YGEKCVTYVRNITDI-----D-----DKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V YVRNITD+ D DKI ++A E N + + F +D
Sbjct: 61 GYQ--VRYVRNITDVGHLERDADEGADKIAKQASLE------NVEPMEVVQRYMNSFHRD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSR 167
L P +P+A+ HIP+ I +IQ I+ G AYE N + F+ +YG S
Sbjct: 113 MALLNVQPPNIEPQASGHIPEQIRMIQEIMNQGLAYEVNGSVYFNIMAYREKYHYGKLSG 172
Query: 168 RKIDEQKMGTRV-PEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R ID+ GTRV + KK P DF LWK++ W SPWG G PGWHIEC+A+++
Sbjct: 173 RNIDDLLAGTRVLAGQQEKKFPLDFALWKKANNTHIMRWPSPWGEGFPGWHIECTALATK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL+FPHHE E+AQS A A W+HN + + +KMSKS GN
Sbjct: 233 YLGSCFDIHGGGMDLLFPHHECELAQSQAAQHT-TLAKYWLHNNLVTINDQKMSKSLGNS 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------- 337
IT++EL + R++ V+R +L HYR + FT + L AE K
Sbjct: 292 ITLDELFQGIHPLLDRAYSPMVLRFFILQAHYRSTLSFTNEALQAAEKGYLKLINGLKTT 351
Query: 338 ---PQTSTSKGIIDP-----------AVLSALYNDLNTVSAIQALHKLARESTK------ 377
G +D A A+ ND NT I L L +
Sbjct: 352 KDMKYAPIGLGNVDEAMVAQVEKHMAACYQAMNNDFNTAKLIAELFHLLKFIHALAYRQV 411
Query: 378 -----NHDLLPIFNA-----SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ ILG+ + + ++ I ++ + K +
Sbjct: 412 DFYKLGEKVFETLKKTYIYILEDILGLREDYKAVPADLLSVI---LKVYSQAKQQKNYEQ 468
Query: 428 ADYIRKQLESKGFILEDYKNPDNG 451
+ +R +L G I++D
Sbjct: 469 IEMLRAELRVLGIIVQDTTRGVEW 492
>gi|154175222|ref|YP_001408206.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
gi|166200139|sp|A7GYB4|SYC_CAMC5 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|112802485|gb|EAT99829.1| cysteinyl-tRNA synthetase [Campylobacter curvus 525.92]
Length = 460
Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats.
Identities = 153/485 (31%), Positives = 238/485 (49%), Gaps = 56/485 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+++++++ F+ I +Y+CGPTVYD AH+G+A+ + FD+L R+L E
Sbjct: 1 MQIFDSVKKQKVAFEPIKSGKASIYLCGPTVYDDAHLGHAKSAVSFDLLRRVLLELGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +VRN TDIDDKI+++ S+ IT + + D + L + P +P+
Sbjct: 60 -VKFVRNYTDIDDKILKKMSDTGKSLE------EITQRYIASYEADMSALNVMQPDIKPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + +I IQ ++ G AYE + I FDT Y S S + + + RV
Sbjct: 113 ATQCLEAIINYIQKLVDKGVAYELKDGIYFDTGKDARYFSLSGKD-NNTDLIARVQSNDE 171
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIHGGGLDL 240
K++ DF+LWK +ESP+GRGRPGWH EC AM YL DIH GG+DL
Sbjct: 172 KRDEKDFVLWKFDDK---WYESPFGRGRPGWHSECVAMIKQYLSNDGEYEIDIHAGGIDL 228
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENE AQ CA+ +K A W+HNGF+ + KMSKS GN + + L +
Sbjct: 229 LFPHHENEAAQCRCAEH-KKLAKYWMHNGFIKVNNEKMSKSLGNSFFVKDAL-------K 280
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAV 351
S P +R ++ +HYR +++ + L A+ L K + T + +V
Sbjct: 281 SVPGEALRFYLIASHYRAHFNYSQEDLFAAKKRLDKIYRLKKRVLGVSAGTCEPNFKASV 340
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASAHIL------GI 394
L AL +DLNT A+ ++ + + + DL + G
Sbjct: 341 LEALSDDLNTSKALASVDEFVKSANDGLDLDPKNKALKAQIAANLEFITRVFGVGAMDGF 400
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
E + ++ + I+ L+ ER K + FS AD IRK+L + + D +
Sbjct: 401 EYFQFGVSDDEKAKIKALLDERTQAKKERNFSKADEIRKKLNAMDIAIMDT------AQG 454
Query: 455 TRWKQ 459
T W++
Sbjct: 455 TMWEK 459
>gi|299135529|ref|ZP_07028713.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
gi|298601653|gb|EFI57807.1| cysteinyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
Length = 494
Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats.
Identities = 173/515 (33%), Positives = 232/515 (45%), Gaps = 78/515 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NTL KI A D +R Y CGPTVYD+ HIGN R + D+L R R Y
Sbjct: 1 MALELFNTLSGKIEPLFASDGHALRFYCCGPTVYDYGHIGNFRTFLHVDMLRRTARLYGM 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+V NITD+DDKII A I T+K + F +D L P
Sbjct: 61 GLH--HVMNITDVDDKIIRNAGNAGL------PIGEYTAKFERAFFEDMDALGVERPEQI 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
RAT +I M+ LI+ + AY+ + F + P YG S++ + + G RV
Sbjct: 113 ARATENIGDMVTLIERLAAQDIAYKAEDGSWYFRIARFPEYGKLSKKDFEGIEDGARVDV 172
Query: 182 KYHKKNP-ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K+ DF LWK + P E W++ G+GRPGWHIECSAM+ YLG FD+H GG DL
Sbjct: 173 DEYDKDAARDFALWKATKPGETSWDTALGKGRPGWHIECSAMAMKYLGDSFDLHAGGEDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQS CA + A W H FL +EG+KMSKS GNF T+ +LL +
Sbjct: 233 MFPHHENEIAQSECATH-QPFARHWFHVRFLLVEGKKMSKSEGNFYTLRDLL------LK 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------- 347
A IR +L YR ++FT LTE+ + +
Sbjct: 286 GHRASAIRFLLLSVPYRHQLNFTFDGLTESTNAVERLRTFYARIRDGKWPESAPADDSVA 345
Query: 348 ------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAH 390
D +AL NDLNT A A+ + R D +L +
Sbjct: 346 SAIRLGDEKFTAALGNDLNTAEARAAIFDVLRAVNSAADQSKLVRTDADAMLTLLAKFDS 405
Query: 391 ILG-IEVCKEHLN------------------------KNISIAIEKLVQERLILLKMKKF 425
I +E L I+ LV ER + K + F
Sbjct: 406 IFAVLEDHDAELTRAAIAWAESEGRLGEADASLLATLSLSDADIDALVAERTLAKKQRNF 465
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ AD +R +L KG ILED K+ RWK+K
Sbjct: 466 ARADAVRNELLEKGIILEDSKD------GVRWKRK 494
>gi|300790490|ref|YP_003770781.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|299800004|gb|ADJ50379.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
Length = 435
Score = 309 bits (792), Expect = 5e-82, Method: Composition-based stats.
Identities = 149/449 (33%), Positives = 223/449 (49%), Gaps = 46/449 (10%)
Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
CG TV HIG+ R ++ +DVL R L + + V VRN+TDIDDKI+ +A +
Sbjct: 2 CGATVQGVPHIGHVRGVLNYDVLRRWLVHSGLD--VLLVRNVTDIDDKILTKAAEN---- 55
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + F +L CL P+ PRAT H+ QM+ L++ +I GH Y A+
Sbjct: 56 --ERPWWEWGATHERAFETAYDQLGCLPPSINPRATGHVTQMVELMERLIESGHGYVADG 113
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
++ F S YG S + +++ + G K++P DF +WK + P EP W +PWG
Sbjct: 114 DVYFSVKSFDEYGKLSGQVLEDVQQGETPTRG--KRDPRDFTMWKSAKPGEPSWPTPWGN 171
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWH+ECSAM++ YLG FDIHGGG+DL+FPHHENE AQS A W+HN +
Sbjct: 172 GRPGWHLECSAMATAYLGAEFDIHGGGIDLVFPHHENERAQSNAVGDA--FARFWLHNAW 229
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ + G KMSKS GN ++I +L+ + AP +R ++ HYR I+++ ++EA
Sbjct: 230 VTMSGEKMSKSLGNTVSIPAMLDR-------YRAPELRYYLVQPHYRSTIEYSDTAVSEA 282
Query: 331 EILLSKWPQTSTSK--------GIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
+ GII A +AL +DL T A +H R+
Sbjct: 283 AQGYRRIETFLRRAAAAGDVPVGIIPEAFANALDDDLATPQAFAVVHTTVRDGNAALDAG 342
Query: 377 ---KNHDLLPIFNASAHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMK 423
K + A +LG++ ++ +S +E L+ ER K
Sbjct: 343 DTSKALEFAAAVRAMTDVLGLDPLSARWSEAGGSETPTKEALSRIVEGLLAERQQARAEK 402
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQ 452
F+ AD R +L+ G ++ED N
Sbjct: 403 DFARADAARDRLQQAGIVVEDTPNGPQWT 431
>gi|254281834|ref|ZP_04956802.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
gi|219678037|gb|EED34386.1| cysteinyl-tRNA synthetase [gamma proteobacterium NOR51-B]
Length = 461
Score = 309 bits (791), Expect = 7e-82, Method: Composition-based stats.
Identities = 169/387 (43%), Positives = 223/387 (57%), Gaps = 24/387 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YNT RK F DP+ + MYVCGPTVY+ AHIGNARP++VFD L R+LR Y
Sbjct: 3 ELALYNTFSRKKEIFTPADPNRVTMYVCGPTVYNLAHIGNARPVVVFDTLNRVLRSRY-- 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y RNITDIDDKIIE AR I +T + T ++ +D L L P +P
Sbjct: 61 PNVIYARNITDIDDKIIEAARSAGTD------IKDVTDEFTAKYREDMGNLNTLIPDIEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT++I M+ L++ ++ HAY A ++F S+ YG S R +D+ G RV
Sbjct: 115 HATDNIGPMLDLMERLLAGDHAYVAEGHVLFAVDSMAEYGQLSGRSLDDMLAGARVEVAS 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+K++P DF+LWK S+ EPGWESPWGRGRPGWH+ECSAM +LG DIHGGG DLIFP
Sbjct: 175 YKRHPGDFVLWKPSSDDEPGWESPWGRGRPGWHLECSAMIKAHLGDTIDIHGGGRDLIFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQSCCA E W+HN +L+++G KMSKS GN T+ ELL +S+
Sbjct: 235 HHENERAQSCCAYGGE-FVRYWMHNAYLDMDGEKMSKSLGNVRTVRELL-------QSYR 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY------- 356
V+R A+L HYR + F+ L A+ L + P + A
Sbjct: 287 GEVLRFALLSAHYRSELTFSESLLDNAKSALDSFYSALRQVADTAPEAVEASETAVAQAL 346
Query: 357 -NDLNTVSAIQALHKLARESTKNHDLL 382
+DLNT AI LH +++ K +
Sbjct: 347 LDDLNTPQAIAELHAVSKRLNKAEEAA 373
>gi|162453596|ref|YP_001615963.1| hypothetical protein sce5320 [Sorangium cellulosum 'So ce 56']
gi|161164178|emb|CAN95483.1| cysS2 [Sorangium cellulosum 'So ce 56']
Length = 512
Score = 309 bits (791), Expect = 8e-82, Method: Composition-based stats.
Identities = 154/526 (29%), Positives = 225/526 (42%), Gaps = 94/526 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NTL RK F + P +R+Y CG TVY HIG+AR +DV R L Y
Sbjct: 1 MPLKVHNTLTRKKEPFVSARPKVVRIYTCGLTVYAPMHIGHARTYCFWDVFRRYLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V + N TDIDD+I++RA + ++ + +N F +D +L
Sbjct: 61 --HVLSIINYTDIDDRIMQRASEREGAV-------DVAERNIAAFRRDCRKLHIKDYAVY 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+ + + + + + +I GHAY N E+ ++ + YG S RK+DEQ++G +
Sbjct: 112 TRATDFVDEQVDMAKRLIEKGHAYTVNGEVFYEVGTWAPYGELSGRKVDEQEVGASGRVE 171
Query: 183 YH---KKNPADFILWKRSTPMEPGWES---PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++PADF LWK + +P W + W GRPGWHIECSAMS+ LG FD+HGG
Sbjct: 172 EDFARKRHPADFSLWKPTGAGQPSWRTGEEGWPTGRPGWHIECSAMSTALLGDHFDVHGG 231
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+D +FPHHENEIAQS W+H L+L+ KMSKS GN I+I ELL
Sbjct: 232 GIDNMFPHHENEIAQSEPLCGR-PWVRYWLHPEHLDLKDMKMSKSLGNVISIEELLSRHG 290
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------ 338
R + HYR + F + L ++ ++
Sbjct: 291 H-------DEARWFFVTQHYRCKLPFGWELLQQSAQGYARIKKLATVLAGKLSGATEAPL 343
Query: 339 -------------------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
Q + A+ +DLNT +A+ A
Sbjct: 344 APGAYASQRPEEERFPRMRHHYVHGQFGEHTERFIARFIEAMDDDLNTPNAVAAFFDYVS 403
Query: 374 ESTKNH--------DLLPIFNAS---AHILGIEVCKEHLNKNI----------------- 405
LL ++ A + G+E+ + L +
Sbjct: 404 ALYSAGIEQCEDRPSLLAVYRAIVRHLAVFGVEIAEPALYPELVPDYALAPAEGAAGRGG 463
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
AI++L+ R K K F+ AD IR L G +LED
Sbjct: 464 DAAIDRLIAMRQEARKAKDFAKADAIRNLLIEAGVVLEDTPRGPRW 509
>gi|315446220|ref|YP_004079099.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
gi|315264523|gb|ADU01265.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
Length = 475
Score = 309 bits (791), Expect = 8e-82, Method: Composition-based stats.
Identities = 154/487 (31%), Positives = 220/487 (45%), Gaps = 68/487 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+TL + +F + P ++ +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 9 MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 68 -VAFIRNVTDIDDKILIKAADAG------RPWWEWAATYERAFTAAYDALGVLPPSAEPR 120
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
AT HI QM+ LI +I GHAY A N ++ F S++P+YG S +ID+ G V
Sbjct: 121 ATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPDYGKLSGHRIDDVHQGEGVA 180
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL
Sbjct: 181 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDL 238
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQ+ A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 239 VFPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVRAAE- 295
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAV 351
+R + HYR ++F+ L +A S G P
Sbjct: 296 ------LRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPKF 349
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
+AL +DL +A+ +H E + D A ILG + E
Sbjct: 350 GAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTHAMSIRAMMGILGADPLDERWE 409
Query: 403 KNISIAIEKLVQERLILLKMKK------------------FSSADYIRKQLESKGFILED 444
L ++ AD IR +L+ G + D
Sbjct: 410 SRDET---------SAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTD 460
Query: 445 YKNPDNG 451
+
Sbjct: 461 TGDGPQW 467
>gi|262199957|ref|YP_003271166.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
gi|262083304|gb|ACY19273.1| cysteinyl-tRNA synthetase [Haliangium ochraceum DSM 14365]
Length = 495
Score = 308 bits (790), Expect = 8e-82, Method: Composition-based stats.
Identities = 157/512 (30%), Positives = 233/512 (45%), Gaps = 85/512 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+I++Y+++ R+ +F+ + P +Y+CGPT Y AH+G+A I FDV+ R L + E
Sbjct: 3 QIRLYDSIRREKVDFEPLQPGKASIYLCGPTPYAPAHLGHAYSAICFDVIRRALSWLGFE 62
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITD++DKI RA + + + + ++ D R LAP +P
Sbjct: 63 --VTFVRNITDVEDKIFARAAENG------EEPLALAERFAAEYNADMARFGVLAPDIEP 114
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + HI ++ LIQ II +G AY + ++ F + YG S + +D+ + G RV
Sbjct: 115 RVSTHIEDIVGLIQGIIDNGAAYPVDGDVYFSVEAFKPYGQLSGQSLDDLRAGARVEVDA 174
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK PADF LWK + P E W++PWGRGRPGWHIECSAMS +LG+ FDIHGGG DL+FP
Sbjct: 175 RKKAPADFALWKSAKPGELAWDAPWGRGRPGWHIECSAMSLRHLGQTFDIHGGGKDLVFP 234
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A + A W+HNGFLN G KMSKS GN ++ +
Sbjct: 235 HHENEIAQSQAAHGEDTFARYWMHNGFLNFSGEKMSKSLGNVFGCRQIADAV-------G 287
Query: 304 APVIRLAMLMTHYREPIDFTVQR------LTEAEILLSKWPQTS---------------- 341
+R + HYR P++F V + E+ +
Sbjct: 288 PEALRFFSVSHHYRSPVNFEVDEVDGVTVFRDLEVADRRLDYFYSTLRRLDDFLATGKDP 347
Query: 342 ------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------------- 380
+ PA AL +D NT I AL + A+ + K D
Sbjct: 348 GEGEVVPEADKLVPAAREALADDFNTPIVIAALGEAAKLANKLLDEPKSAPKPVRRRTLQ 407
Query: 381 -LLPIFNASAHILGIEVCKE------------HLNKNISIAIEKLVQERLILL------- 420
L +G+ + + L+++R
Sbjct: 408 KLARELREVGSAIGVLGSEPAAFLGERRNRLAAKRNIDPAEVATLLEQRAEARKAKDFAA 467
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+R Q+++ G + D + + +
Sbjct: 468 AD-------ALRDQIKALGVEVLDTAHGVDWK 492
>gi|298242724|ref|ZP_06966531.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
gi|297555778|gb|EFH89642.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
Length = 486
Score = 308 bits (790), Expect = 9e-82, Method: Composition-based stats.
Identities = 148/482 (30%), Positives = 228/482 (47%), Gaps = 36/482 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + IYNTL RK FQ ++P + +Y CGPTVY H+GN R ++ D L R+L Y
Sbjct: 6 DKPVYIYNTLTRKRELFQPLNPPGVGIYSCGPTVYKDIHVGNFRTFMMTDWLRRMLEYNG 65
Query: 62 GEKCVTYVRNITDI-----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
+ V VRNITD+ DD + E+ + + I + T+Q+++D L
Sbjct: 66 YD--VYLVRNITDVGHLQNDDVESGEDKLEYEARTTGRSAYDIAQRYTEQYMRDAAELNI 123
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM- 175
L P P+AT+HI +M+ + Q ++ G AY A+ + +D + P YG S ++ +
Sbjct: 124 LPPHLSPKATDHIGEMLEMTQALVEKGLAYIADGNVYYDVAHFPEYGKLSGNTVENLRAG 183
Query: 176 ---GTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
++ K++P DF LWK+ + W SPWG G PGWHIECSAM++ YLG+ F
Sbjct: 184 GHGREQMEVAEDKRSPEDFALWKKGDEGRQMNWGSPWGSGFPGWHIECSAMATKYLGEQF 243
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN-- 289
DIH GGLDL+FPHHE+EIAQS E W+H FL + RKM SN N
Sbjct: 244 DIHTGGLDLMFPHHEDEIAQSQGTFGKEP-VKYWVHGEFLIIGNRKMKASNENGDDSIKM 302
Query: 290 -----ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------ 338
+L R ML HYR I++T + A+ L+
Sbjct: 303 SRSKGNVLLVSTLKEEGIDPMAFRYLMLTAHYRSKINYTDDSIQAAQNALNNLRDDLAEL 362
Query: 339 -------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASAH 390
S + A A+ NDL+ +A+ + R + + + +
Sbjct: 363 PITEQTANWSEEAQRVRDAFREAINNDLDLPTALVLTRETVRNAKIEPAERRHLVLDFDR 422
Query: 391 ILG--IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG ++ + IS ++++V++R K + +D +R +L++ GF + D
Sbjct: 423 VLGLRLDTVEPKKPLEISDEVKEIVRQRDEARAAKNWKRSDQLRDELKALGFEVRDTPRG 482
Query: 449 DN 450
Sbjct: 483 TE 484
>gi|145222038|ref|YP_001132716.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|187631640|sp|A4T5K9|SYC_MYCGI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|145214524|gb|ABP43928.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
Length = 467
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 154/487 (31%), Positives = 219/487 (44%), Gaps = 68/487 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+TL + +F + P ++ +Y+CG TV HIG+ R + FDVL R L +
Sbjct: 1 MRLYDTLSGGVRDFAPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDVLRRWLTAKGFD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V ++RN+TDIDDKI+ +A + + F L L P+ +PR
Sbjct: 60 -VAFIRNVTDIDDKILIKAADAG------RPWWEWAATYERAFTAAYDALGVLPPSAEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA----NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
AT HI QM+ LI +I GHAY A N ++ F S++P YG S +ID+ G V
Sbjct: 113 ATGHITQMVELIDRLIERGHAYCADQEGNGDVYFSVSTLPEYGKLSGHRIDDVHQGEGVA 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++ DF LWK + P EP W +PWGRGRPGWH EC AM YLG FDIH GG+DL
Sbjct: 173 TG--KRDQRDFTLWKGAKPGEPSWPTPWGRGRPGWHTECVAMCEAYLGAEFDIHAGGMDL 230
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENEIAQ+ A A W+HNG++ + G KMSKS GN + I +L+ +
Sbjct: 231 VFPHHENEIAQAEAAGDG--FARFWLHNGWVTMGGEKMSKSLGNVLAIPAVLQRVRAAE- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------GIIDPAV 351
+R + HYR ++F+ L +A S G P
Sbjct: 288 ------LRYYLGSAHYRSMLEFSENALQDAARAYSGVEDFLHRVRVRVGAVVPGEWTPKF 341
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLN 402
+AL +DL +A+ +H E + D A ILG + E
Sbjct: 342 GAALDDDLAVPAALAEVHAARAEGNRALDAGDHDAALTYAMSIRAMMGILGADPLDERWE 401
Query: 403 KNISIAIEKLVQERLILLKMKK------------------FSSADYIRKQLESKGFILED 444
L ++ AD IR +L+ G + D
Sbjct: 402 SRDKT---------SAALAAVDVLVHAEVRRREDARARRDWAEADAIRDRLKEAGIEVTD 452
Query: 445 YKNPDNG 451
+
Sbjct: 453 TGDGPQW 459
>gi|48477156|ref|YP_022862.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
gi|48429804|gb|AAT42669.1| cysteinyl-tRNA synthetase [Picrophilus torridus DSM 9790]
Length = 455
Score = 308 bits (789), Expect = 1e-81, Method: Composition-based stats.
Identities = 158/470 (33%), Positives = 244/470 (51%), Gaps = 41/470 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++ Y+TL + EF+ + + I ++VCGPTVYD H+G+AR I FD + + +R
Sbjct: 1 MRFYDTLSGSVKEFKPMHKNRINIFVCGPTVYDDFHLGHARTYIFFDTIVKFMRSIGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII+RA E + + I ++ ++++ + L + + R
Sbjct: 59 SVFYLQNITDIDDKIIKRAHDE------DRSPEEIANRYFNEYLRIMSELGIDSVNYYAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I ++I I+ +I G+AYE ++ + F +YG S++ +D R
Sbjct: 113 ATLYIDEIISQIKRMIEKGYAYETSDGVYFCVRKFRDYGELSKQNLDNIIENARGILNED 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK+ P EP WESPWG+GRPGWHIE +A++ Y G +DIHGGG DLIFPH
Sbjct: 173 KRNPEDFVLWKKMKPGEPYWESPWGKGRPGWHIEDTAITETYFGDEYDIHGGGSDLIFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ A+ WIH G +N+ KMSKS N+ITI ++L + +
Sbjct: 233 HEAEIAQMRSISNKRYLAHYWIHTGMINVNREKMSKSLKNYITIKDVL-------KEYKP 285
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------PA 350
+R A+L ++ I+F++ L E+ LS+ T ID
Sbjct: 286 NELRFAVLNANFNTSIEFSMDSLNESREALSRIINTYRKLKKIDSESGDYMVDSDYIIKR 345
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGIEVCKEHL 401
+ + ++ +T S I+ L + KN D ++ IF+ + I + L
Sbjct: 346 YMDIMSDNFDTRSLIRELMDFVTDINKNMDHINKDTAGNIIRIFDYINSFMNIIPEERSL 405
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
N NI I+ ++ R L K++ +DYIR +LE G +ED N
Sbjct: 406 NNNI---IDSVLNIRSKLRSEKRYDLSDYIRMELEKSGIHIEDKNNKTQW 452
>gi|315453045|ref|YP_004073315.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
gi|315132097|emb|CBY82725.1| cysteinyl-tRNA synthetase [Helicobacter felis ATCC 49179]
Length = 474
Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats.
Identities = 155/491 (31%), Positives = 236/491 (48%), Gaps = 61/491 (12%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IY++ ++ + + ++++Y+CGPTVYD AH+G+AR I FD+L R L V
Sbjct: 6 IYDSKTKQKQLLEPLVGHDVKIYICGPTVYDHAHLGHARSAIAFDLLRRTLEQSGY--VV 63
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V+N TDIDDKII +A QE S S ++++ + + D L P +P+AT
Sbjct: 64 EMVKNFTDIDDKIIAKAAQEGVST------SALSARYIESYTADMQALGVQKPHLEPKAT 117
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
H+ M +IQ ++ GHAY+ +++I DT YGS S +E +R+ + K+
Sbjct: 118 AHLGAMFNIIQQLLDKGHAYQIDHDIYLDTHKDQAYGSLSGHIYNEA-DVSRLEDNPLKR 176
Query: 187 NPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGLDL 240
+P DF LWK + G+ESP+G+GRPGWH+ECS+M + DIH GG DL
Sbjct: 177 HPQDFALWKSYKGESDVGYESPFGKGRPGWHLECSSMIFANMAYHDQAYQIDIHAGGSDL 236
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE Q+ CA E A W+HNGF+N+ G KMSKS GN + + L +
Sbjct: 237 FFPHHENEACQTRCAFSQE-LAKYWMHNGFVNISGEKMSKSLGNSFYVKDAL-------K 288
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------QTSTSKGII 347
+ ++R +L HYR + F + L ++ L K +
Sbjct: 289 IYDGEIVRNYLLGIHYRAVLHFNEEDLLASKKRLDKIYRLKKRALECATKTPPPSPNPNF 348
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILGI 394
A L AL +DLN A+ L + + D +L + +LG+
Sbjct: 349 QRAFLQALQDDLNISKALSVLEEHVHVCNEILDQATKQTRASMACAILEDLDYVNTLLGL 408
Query: 395 EVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
++ + IE+ + RL K K F+ AD IR+ L +G +L D
Sbjct: 409 GGKDPIAYFQLGVDATLLAHIEEQIARRLEAKKAKDFALADRIREDLAHQGILLMDT--- 465
Query: 449 DNGQRMTRWKQ 459
+ T W++
Sbjct: 466 ---PQQTLWER 473
>gi|269964028|ref|ZP_06178334.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
gi|269831247|gb|EEZ85400.1| conserved hypothetical protein [Vibrio harveyi 1DA3]
Length = 457
Score = 308 bits (788), Expect = 2e-81, Method: Composition-based stats.
Identities = 151/471 (32%), Positives = 225/471 (47%), Gaps = 37/471 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K++++NTL R + F I+ + +Y CGPTVYD+AH GN R + DVL R L
Sbjct: 3 QSKLQLFNTLGRTLEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V +V NITD+ +DK+ + AR++ N + I F+ D
Sbjct: 63 YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDAFLDDL 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
T L P+ RAT HI + I +Q + Y+ ++ + FD++ +P+YG ++ +
Sbjct: 115 TSLNITKPSIICRATEHIQEQIEFVQELEQKSFTYQTSDGVYFDSAKLPDYGKLAKLDRE 174
Query: 172 EQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV KK+P DF LWK TP + WESPWG G PGWHIECSAM+ YLG+
Sbjct: 175 GLEAGIRVEMAE-KKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGE 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
VFDIH GG D I HH NEIAQ + AN W+H FL L K+SKS +
Sbjct: 234 VFDIHVGGEDHIPVHHTNEIAQCQAKNG-HVQANYWLHGFFLQLNKEKISKSGTS----- 287
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGI 346
L F + + R +L +HYR + FT + L A+ L + G
Sbjct: 288 --LRLDAFIEKGYDPLTYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGK 345
Query: 347 IDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+D + NDL AI + +L + D + G+E+ K
Sbjct: 346 VDQMYVERFVSLINNDLAMPQAIALMWELLGSVLNDADKKATARYFDRVFGLELDKVEEE 405
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ +LV+ RL + K K++ AD IR+++ G+ + D + +
Sbjct: 406 EIPLEI-LELVELRLEMKKQKEYQQADEIRQKVAEIGYRINDAGDGSTVSK 455
>gi|322379889|ref|ZP_08054175.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
gi|321147684|gb|EFX42298.1| cysteinyl-tRNA synthetase [Helicobacter suis HS5]
Length = 475
Score = 307 bits (786), Expect = 2e-81, Method: Composition-based stats.
Identities = 156/497 (31%), Positives = 237/497 (47%), Gaps = 61/497 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I ++++ ++ F + +++Y+CGPTVYD++H+G+AR IVFD+L R+L
Sbjct: 1 MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLTLS 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+N TDIDDKII +A QE I+ ++ + ++++ L L PT
Sbjct: 61 GY--SVEIVKNFTDIDDKIISKALQEGV------NITDLSRRFIASYLEEMQALGVLRPT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+A+ H+ + +I+ ++ G+AY+ I DT YGS S + E + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSL-EAENVSRI 171
Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDI 233
+ K +P DF LWK + G+ S +G+GRPGWHIECSAM ++ DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG DL FPHHENE Q+ CA E A WIHNGF+N+ G+KMSKS GN I + L
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFNQE-LAQFWIHNGFVNISGQKMSKSLGNSFYIKDAL- 289
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-- 351
+ + V+R +L HY + F + L + L K + I P
Sbjct: 290 ------KVYDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRALEISPEKSK 343
Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNAS 388
L A+ +DLN A+ L + +ES ++ D +L
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLDNASSKTNKKKCAQEILENLTFI 403
Query: 389 AHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+LG+ L + + I + R + K F+ AD IRK L +G L
Sbjct: 404 DQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLAQQGISL 463
Query: 443 EDYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 464 MDT------PSGTIWEK 474
>gi|206896033|ref|YP_002247201.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
5265]
gi|206738650|gb|ACI17728.1| cysteinyl-tRNA synthetase [Coprothermobacter proteolyticus DSM
5265]
Length = 460
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 158/483 (32%), Positives = 226/483 (46%), Gaps = 50/483 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+TL RK + + I YVCG T YD H+G+ R +VFD+ +R ++ +
Sbjct: 1 MKLYDTLSRKFVDLEKKPGEKIAGYVCGITPYDEPHLGHVRTALVFDLFHRYVKAQGYKP 60
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+V N TD+DDKIIER S+ ++ + + + K L R
Sbjct: 61 V--FVSNFTDVDDKIIER------SVQLSIHPFALAEIYERLYYKLMDFLNVEPLYAYIR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK-MGTRVPEKY 183
+ IP +I I+ +I HAY + + F S PNYG S RK+++ + +RV
Sbjct: 113 VSQVIPDIIEAIKQLIDKKHAYVTPDGVYFSVPSFPNYGELSGRKVEDISLLESRVEPSP 172
Query: 184 HKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DF LWK P E W SPWG GRPGWHIEC+ +S + G D HGGG DLIF
Sbjct: 173 FKKDPRDFALWKSRKPNETVWWHSPWGDGRPGWHIECTVISVKFAGFPLDFHGGGSDLIF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS E A W+H G L + +M KS GNFI E++ +
Sbjct: 233 PHHENEKAQSEALMGQEPFARAWMHTGMLRIGKEEMHKSLGNFIGATEIMA-------KY 285
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
V+R +L T+YR+P+ F+ + +A ++ +
Sbjct: 286 DPDVLRYLLLSTYYRDPVTFSEEVYNQAANTVNNLRSYFERLDWVSRDGEARTQVVSLVA 345
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASA-----HILGIEVC 397
SAL +DLN+ +A+ +HKL + N I + G+ +
Sbjct: 346 SAKETFHSALEDDLNSSAALAEVHKLIAQLRVEDLNTSEASIVKQFLTHGLRTVFGLRLT 405
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K K I+ +V+ R K KKFS AD IR L G +LED K TRW
Sbjct: 406 KN--GKVDESLIQDMVELRNDFRKQKKFSEADAIRDMLLRHGIVLEDTK------EGTRW 457
Query: 458 KQK 460
++
Sbjct: 458 IRE 460
>gi|120610992|ref|YP_970670.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|187629785|sp|A1TPK8|SYC_ACIAC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|120589456|gb|ABM32896.1| cysteinyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 459
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 161/395 (40%), Positives = 219/395 (55%), Gaps = 31/395 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + +F ++P ++RMYVCG T+YD HIG+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRAMEDFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + T +D LA PT +
Sbjct: 60 -LRVTYVRNITDIDDKIIRRAVERGIT------IRQLTDEMTAAMHEDIGALAIEPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ LI + G AY A + ++ + YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLSLIGTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++P DF+LWK + P EP W+SP+G GRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGII 347
+ A +R ++ THYR P++++ L +A L +
Sbjct: 286 -QQVDAETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+A+ D T A+ L +LA E +
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRTRSAR 379
>gi|218295459|ref|ZP_03496272.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
gi|218244091|gb|EED10617.1| cysteinyl-tRNA synthetase [Thermus aquaticus Y51MC23]
Length = 480
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 159/492 (32%), Positives = 239/492 (48%), Gaps = 60/492 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+T++RK F+ P ++ +YVCGPTVY H+G+AR IV+DVL R +
Sbjct: 1 MGLVIYDTMQRKKVPFEPATPGHVGIYVCGPTVYADPHLGHARGPIVYDVLRRYFLHKGY 60
Query: 63 EKCVTYVRNITDI---------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V +V NITD+ +DK+ +RA+ E + K T +
Sbjct: 61 --KVRFVSNITDVGHLTEDDEGEDKVAKRAKLEKLE------PMEVAEKYTWSYFDAMAA 112
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
L L P+ PRA+ HIP+M L Q ++ G AY + F + P YG S ++ +E
Sbjct: 113 LNVLRPSIAPRASGHIPEMWELTQKLLERGVAYVREGSVYFRVRAFPEYGKLSGKRPEEL 172
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ G RV + K++P DF LWKR+ P W+SPWG G PGWHIEC+AMS YLG+ FD
Sbjct: 173 RAGARVEVREEKEDPLDFALWKRAEPGHLMRWKSPWGEGYPGWHIECTAMSLKYLGEGFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
+H GG+DL FPHHE EIAQ+ A A W+H+ + LEG KM+KS GN + +++LL
Sbjct: 233 LHAGGIDLQFPHHECEIAQAEAAGYR--FARHWMHHNHVLLEGEKMAKSTGNLVLLHDLL 290
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------- 343
R+ +R +L THYR P+DFT L A+ ++
Sbjct: 291 -------RAHEPMAVRFYLLQTHYRSPMDFTFAGLEAAKKGYARLLNAYREVRARKKTAP 343
Query: 344 ----------KGIIDPAVLSALYNDLNTVSAIQALH----KLARESTKNHD-----LLPI 384
++ ++A+ +DL+T A+ +L R + +
Sbjct: 344 KGTTPELERALEALEKGFMAAIEDDLSTPEALAQFFTFLPELHRLLPEAREESLRRAEEA 403
Query: 385 FNASAH-ILGIEVCKEHLNKNIS----IAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
F+ ILG+ + K I L++ R + K ++ +D IR +L++ G
Sbjct: 404 FHTLGEGILGLFPERVLEEKLSGPLLEGLIGLLLELREEARRAKDYAKSDLIRDRLKALG 463
Query: 440 FILEDYKNPDNG 451
I+ED K
Sbjct: 464 VIVEDTKEGPRW 475
>gi|116495760|ref|YP_807494.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|301067316|ref|YP_003789339.1| cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
gi|116105910|gb|ABJ71052.1| cysteinyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|300439723|gb|ADK19489.1| Cysteinyl-tRNA synthetase [Lactobacillus casei str. Zhang]
Length = 444
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 163/469 (34%), Positives = 236/469 (50%), Gaps = 61/469 (13%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVY++ HIGNAR I FD + R Y VTYV N TD+DDKII A +
Sbjct: 1 MYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGY--KVTYVSNFTDVDDKIINAAHKTG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+A + + F++DTT L T PRA+ IP +I +Q++I +AY
Sbjct: 59 ------EAPLDLAQRFIDAFMEDTTALGIEPATAHPRASQMIPDIIEFVQDLIDKEYAYA 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA----DFILWKRSTPMEPG 203
+ ++ + +YG S + +DE + G + DF LWK + P E
Sbjct: 113 VDGDVYYRARKFKHYGELSHQNVDELEEGASQHITQDELAKKEDPIDFALWKAAKPGEIS 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
WESPWG+GRPGWHIECS MS+ LG FDIHGGG DL FPHHENEIAQS ++
Sbjct: 173 WESPWGKGRPGWHIECSVMSTKLLGDTFDIHGGGQDLEFPHHENEIAQSEAKTD-KQFVR 231
Query: 264 IWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
W+HNGF+ + + KMSKS GNFIT++++ ++ V+R M T YR PI
Sbjct: 232 YWMHNGFVTIGEDDEKMSKSLGNFITVHDI-------RKTVDPQVLRFFMAGTQYRMPIR 284
Query: 322 FTVQRLTEAEILLSKW-------------------PQTSTSKGIIDPAVLSALYNDLNTV 362
++ L A L++ PQ + + ++A+ +D+N
Sbjct: 285 YSETNLKNAANSLNRLKIARENLTYRRRGAETGVDPQITKQLQTLKDRFVTAMDDDINVQ 344
Query: 363 SAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
+ + L LA+ + +DLL ++A I G+ + K++ I+
Sbjct: 345 NGLTVLFDLAKLLNEYANEETVKSESINDLLNEYDAWLQIFGVVFADQ---KSLDADIDA 401
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
LV+ R K F+ +D IR QL ++G ILED + TRW+++
Sbjct: 402 LVKARDAARAAKDFAKSDQIRDQLAAQGIILEDT------PQGTRWRRQ 444
>gi|75760638|ref|ZP_00740667.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491881|gb|EAO55068.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 339
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 141/344 (40%), Positives = 197/344 (57%), Gaps = 16/344 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I IYNTL R+ EF ++ + ++MYVCGPTVY++ HIGNARP +VFD + R L Y
Sbjct: 1 MTIHIYNTLTRQKEEFVPLEENKVKMYVCGPTVYNYIHIGNARPPMVFDTVRRYLEYKGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV N TD+DDK+I+ A + +P I + + + +D T L C T
Sbjct: 61 D--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAYFEDVTALGCKHATVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ +I IQ ++ G+AYE+ ++ F T YG S + I + + G R+
Sbjct: 113 PRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSHQPIADLRHGARIEVG 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YLG DIH GG DL F
Sbjct: 173 EKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYLGDTIDIHAGGQDLAF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + A W+HNG++N+ KMSKS GNFI +++++ + +
Sbjct: 233 PHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFILVHDII-------KQY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+IR ML HYR PI+F+ + L L + +
Sbjct: 285 DPQLIRFFMLSVHYRHPINFSEELLQXTNNGLERIKTAYGNLKA 328
>gi|15383990|gb|AAK96068.1|AF393466_2 cysteinyl-tRNA synthetase [uncultured crenarchaeote 74A4]
Length = 462
Score = 307 bits (786), Expect = 3e-81, Method: Composition-based stats.
Identities = 169/463 (36%), Positives = 236/463 (50%), Gaps = 51/463 (11%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
I++Y+CG TVYD +HIG+AR +IVFDVL + L + V +V+N TD+DDKII RA
Sbjct: 18 KKIKIYLCGVTVYDESHIGHARTIIVFDVLRKYLESK--KVEVDFVQNFTDVDDKIINRA 75
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E N I+SK + + +D L T+ P+AT HI +I I+ +I
Sbjct: 76 TKE------NVTAEEISSKYIENYFRDFEELNVKRATNYPKATEHIEDIIEFIKKLIDKE 129
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
AY N + F S YG S++KIDE + G+R+ KK+PADF +WK + + P
Sbjct: 130 IAYVTKNGVYFAVSKFSEYGKLSKKKIDELQSGSRIQIDETKKDPADFAVWK-FSDINPT 188
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
WESPWG+GRPGWHIECS MS YLG+ FDIHGGG DLIFPHHENEIAQS + A
Sbjct: 189 WESPWGKGRPGWHIECSVMSLKYLGENFDIHGGGRDLIFPHHENEIAQSEACTNL-PFAK 247
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
IW+H G + + G KMSKS GN +I ++LE +W +IRL L HY + ID++
Sbjct: 248 IWMHVGMVTISGEKMSKSLGNTKSIKQVLE-------NWGPNIIRLFCLSGHYSKVIDYS 300
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY---------------NDLNTVSAIQAL 368
L E + + + +D NT A+ A
Sbjct: 301 EDMLKENLTKWRQVETCYFELIHANNKNQENVSENVQKIGIEFDKSLEDDFNTHLALSAF 360
Query: 369 HKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
+L +E+ + + F + ILG+ + + NK I++L+ R
Sbjct: 361 FQLVKETNRLAAAEKLGKENGAIIKKEFKRISAILGLTIPEMSQNKI--QEIDELILNRE 418
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ K+F AD IR +L L D+K T W +K
Sbjct: 419 KFREEKQFDKADKIRDELNKMNIELIDHK------ERTIWMKK 455
>gi|323342428|ref|ZP_08082660.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
gi|322463540|gb|EFY08734.1| cysteine--tRNA ligase [Erysipelothrix rhusiopathiae ATCC 19414]
Length = 445
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 146/463 (31%), Positives = 225/463 (48%), Gaps = 48/463 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+ + EF+ I+ + MYVCGPTVY++AHIGNARP++VFD+L R+L +
Sbjct: 1 MKLYNSKSNSLEEFKPIEEGKVSMYVCGPTVYNYAHIGNARPIVVFDLLRRVLETLGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TD+DDKII++A +E + I+++ + + K L P+
Sbjct: 60 -VKLVSNYTDVDDKIIKKASEEGVDESV------ISNRYIEAYEKVRKGLHADHVQATPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
TN +P++I IQ++I H +AY + ++ F S YG+ S + IDE +G R+ E +
Sbjct: 113 VTNTMPEIISFIQDLIDHDYAYASKGDVYFRVSKAEEYGAISSQNIDELMVGARIEENSN 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS-SHYLGKVFDIHGGGLDLIFP 243
K+NP DF+LWK + W++PWG+GRPGWH EC M + + ++ DIHGGG DL FP
Sbjct: 173 KENPLDFVLWKDTNDNGIKWDAPWGKGRPGWHTECVVMINNEFKQEIIDIHGGGQDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ AN W+HN LN++G KMSKS GN + E ++
Sbjct: 233 HHENESAQCRALHN-HDLANYWVHNAMLNIDGEKMSKSIGNVMWAQEFIDKLGE------ 285
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGII 347
R ++ THYR ++ T + + + L + + + +
Sbjct: 286 -NATRWLLMSTHYRLTLNITEELVEQTHKELDRIFQGLNKAYIELEKLEFQIDTNYDELR 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEV 396
+ A+ +DLN +A L ++ I +LGI
Sbjct: 345 FNQFMDAMSDDLNVANANVVLFDTVKQLNAAVRQREINASDVSKYIVTVEKMLDVLGISY 404
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
+ + A L ++ K F AD R +L +G
Sbjct: 405 TR----IVLDEAARLLFKQWNEAKARKDFDDADRYRGELIERG 443
>gi|326317611|ref|YP_004235283.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323374447|gb|ADX46716.1| cysteinyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 459
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 162/393 (41%), Positives = 219/393 (55%), Gaps = 31/393 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + EF ++P ++RMYVCG T+YD HIG+AR M+ FDV+ R LR
Sbjct: 1 MSLRIYNTLSRAMEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLRSSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + T +D LA PT +
Sbjct: 60 -LRVTYVRNITDIDDKIIRRAVERGIT------IRQLTDEMTAAMHEDIGALAIEPPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++PQM+ LI + G AY A + ++ + YG S + +DE + G RV
Sbjct: 113 PRATEYVPQMLSLIDTLERKGLAYRAGSGDVNYAVRRFEGYGKLSGKSLDELRAGERVAV 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++P DF+LWK + P EP W+SP+G GRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 173 QDDKQDPLDFVLWKAAKPGEPPEAKWDSPFGTGRPGWHIECSAMSCATLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS A + A W+HNGF+ ++ KMSKS GNF TI E+L
Sbjct: 233 DLQFPHHENEIAQSEGATG-KPLARFWMHNGFVRVDNEKMSKSLGNFFTIREVL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGII 347
+ A +R ++ THYR P++++ L +A L +
Sbjct: 286 -QQVDAETLRFFIVRTHYRSPLNYSDVHLQDARASLKRLYTALALVAPEDIGAIDWADPH 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+A+ D T A+ L +LA E +
Sbjct: 345 AARFKAAMDEDFGTPEAVAVLFELAGEVNRTRS 377
>gi|160916264|ref|ZP_02078471.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
gi|158431988|gb|EDP10277.1| hypothetical protein EUBDOL_02291 [Eubacterium dolichum DSM 3991]
Length = 446
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 155/467 (33%), Positives = 228/467 (48%), Gaps = 49/467 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K++N++ + I EF+ + +RMYVCGPTVY++ HIGN RP++VFD L R L+
Sbjct: 1 MEMKLFNSMTQSIEEFKPLHEGEVRMYVCGPTVYNYPHIGNVRPIVVFDTLKRTLQAIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V V N TD+DDKII+ A++ S IT K + + +D L + P
Sbjct: 61 --NVKMVSNYTDVDDKIIKVAKEAGVSE------KEITEKFIKAYNEDRLSLHAMMPDAA 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ T + +I I ++ G+AY + ++ F +S+ +YG S ++I++ +G R+ E
Sbjct: 113 PKVTETMDAIIAFINLLVEKGNAYVVDGDVYFRVNSVDDYGKLSNQQIEDLMVGARIDEN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLI 241
K+NP DF LWKR T W+SPW GRPGWH EC M + + DIHGGG+DL
Sbjct: 173 SKKENPLDFTLWKR-TEEGIRWQSPWSLGRPGWHTECVVMINDVFKEPIIDIHGGGMDLK 231
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A WIHNG +N++G KMSKS GN I +++ +
Sbjct: 232 FPHHENEIAQSKAAYGTA-IAKYWIHNGMVNIDGEKMSKSLGNVIWAKDMIAS------- 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQ----RLTEAEILLSKWPQTSTSKGIIDPAVLSALY- 356
V+R ML THYR P++ E ++ Q + D +
Sbjct: 284 IGGNVLRWLMLSTHYRSPLNINEDGIETARKELSKVMQPLKQAYVKLSLADHVIGEDHDE 343
Query: 357 -----------NDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGI 394
+DLNT +A AL + + + I ILGI
Sbjct: 344 VLVAPFLAAMEDDLNTPNAFAALFEAVKVFNQTLRQREIDYAKLSKQCVSIEKMLDILGI 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
E + L+ + L + +K K F AD R +L +G +
Sbjct: 404 ESQRLVLSDED----KALHGKWRAAVKEKDFEQADMYRAKLIERGIL 446
>gi|310286868|ref|YP_003938126.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
gi|309250804|gb|ADO52552.1| cysteinyl-tRNA synthetase [Bifidobacterium bifidum S17]
Length = 540
Score = 307 bits (785), Expect = 3e-81, Method: Composition-based stats.
Identities = 155/539 (28%), Positives = 229/539 (42%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + +YVCG TV HIG+ R + FDV+ R + +
Sbjct: 25 LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ- 83
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++ + ++F + L L PT++PR
Sbjct: 84 -VTFVRNVTDIDDKILDK------AAAAGQQWWARAYFYEREFTQAYDTLGVLPPTYEPR 136
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG- 176
AT H+ MI LI+ II +GH Y + + FD +S P+YG + +K +
Sbjct: 137 ATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEADE 196
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK P +P W +P+G
Sbjct: 197 AAAVADRMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFGV 256
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A E A W+H+ +
Sbjct: 257 GRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTRAA-GYESAAR-WMHSAW 314
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 315 VTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEA 367
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + +SA+ +D+N A A+
Sbjct: 368 QAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTAI 427
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------- 402
R L A LG++ E
Sbjct: 428 RNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESRE 487
Query: 403 -KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I + + R K + F+ AD IR L + G +ED G + + W K
Sbjct: 488 HDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540
>gi|323214246|gb|EFZ99004.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
Length = 310
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 144/326 (44%), Positives = 199/326 (61%), Gaps = 17/326 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + +
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT 328
A +R ++ HYR ++++ + L
Sbjct: 285 DAETVRYFLMSGHYRAKLNYSEENLK 310
>gi|322378637|ref|ZP_08053073.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
gi|321148944|gb|EFX43408.1| cysteinyl-tRNA synthetase [Helicobacter suis HS1]
Length = 475
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 156/497 (31%), Positives = 237/497 (47%), Gaps = 61/497 (12%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I ++++ ++ F + +++Y+CGPTVYD++H+G+AR IVFD+L R+L
Sbjct: 1 MHPPIYLFDSHHKQKRPFVPLKAPKVKIYICGPTVYDYSHLGHARSAIVFDLLTRMLTLS 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V+N TDIDDKII +A QE I+ ++ + ++++ L L PT
Sbjct: 61 GY--SVEIVKNFTDIDDKIISKALQEGV------NITDLSRRFIASYLEEMQALGVLRPT 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+P+A+ H+ + +I+ ++ G+AY+ I DT YGS S + E + +R+
Sbjct: 113 SEPKASEHLEAIEDMIKRLLEKGYAYQTKEGSIYLDTRLDSAYGSLSAHSL-EAENVSRI 171
Query: 180 PEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDI 233
+ K +P DF LWK + G+ S +G+GRPGWHIECSAM ++ DI
Sbjct: 172 EDNLEKHHPQDFALWKTYKGEGDLGYLSAFGKGRPGWHIECSAMIANTLAYLDEPYQIDI 231
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG DL FPHHENE Q+ CA E A WIHNGF+N+ G+KMSKS GN I + L
Sbjct: 232 HGGGSDLFFPHHENEACQTRCAFNQE-LAQFWIHNGFVNISGQKMSKSLGNSFYIKDAL- 289
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-- 351
+ + V+R +L HY + F + L + L K + I P
Sbjct: 290 ------KVYDGEVLRNYLLGVHYSAILHFNEEDLNSQKKRLDKLYRLKKRTLEISPEKSK 343
Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTKNHD--------------LLPIFNAS 388
L A+ +DLN A+ L + +ES ++ D +L
Sbjct: 344 SNQNFQHALLQAMQDDLNISKALSILEEYLQESNQSLDNASSKTNKKKCAQEILENLTFI 403
Query: 389 AHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+LG+ L + + I + R + K F+ AD IRK L +G L
Sbjct: 404 DQLLGLGGKDPTLYFQLGVDTALKDKITTQILRRQKAKEAKDFALADSIRKDLAQQGISL 463
Query: 443 EDYKNPDNGQRMTRWKQ 459
D T W++
Sbjct: 464 MDT------PSGTIWEK 474
>gi|325971494|ref|YP_004247685.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
gi|324026732|gb|ADY13491.1| cysteinyl-tRNA synthetase [Spirochaeta sp. Buddy]
Length = 471
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 153/477 (32%), Positives = 224/477 (46%), Gaps = 42/477 (8%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YNT+ R + F I S + +Y CGPTVY++AHIGN R + D+L R LR V
Sbjct: 5 LYNTMSRALEPFHPIKESEVGLYSCGPTVYNYAHIGNLRTFLFEDLLKRTLRVSGF--TV 62
Query: 67 TYVRNITDI-------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
+V NITD+ DD + E + N I + T+ F KD L + P
Sbjct: 63 NHVMNITDVGHLTGDGDD---GEDKLEKMAHTTNRTAWEIAAFYTEAFFKDYDDLNMIRP 119
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--GT 177
+ +AT+H+ QMI LI+ + GH Y + + F SIP+YG +R +D +
Sbjct: 120 STVCKATDHVQQMIDLIKRLEAGGHTYISGGNVYFSIDSIPDYGKLARLDLDALRTAVRE 179
Query: 178 RVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
V +KKN DF+LW + W+SPWGRG PGWHIECSAMS HYLG+ FDIH
Sbjct: 180 DVEVDGNKKNSKDFVLWFTKSKHGEQAMMWDSPWGRGFPGWHIECSAMSMHYLGESFDIH 239
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG+D I HH NEIAQS A + N W+H FL E KMSKS G F+T++ L
Sbjct: 240 CGGIDAIPVHHTNEIAQSEAATG-KGWVNYWLHGEFLLDETGKMSKSKGEFLTLSLLTS- 297
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----------- 343
+ + R L HYR + F+ L+ A +
Sbjct: 298 -----KGYEPMDYRYFCLGGHYRSQLKFSFDSLSTARTARRNVYDRIQNLLTQGAKQVVL 352
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-NASAHILGIEVCK 398
A L + NDLNT A+ L + ++ + D + G++
Sbjct: 353 QRDEALAYQTAFLQHIQNDLNTPRALADLWGVLKDENLSIDEKYSLCLFFDQVFGLKFDS 412
Query: 399 --EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ + L+ +R K + ++ AD +R +LES G++++D + + ++
Sbjct: 413 ITKAEEQTFPSQALALLDQRTEAKKARNWALADSLRSELESMGYVVKDTPSGSSLEK 469
>gi|32266016|ref|NP_860048.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
gi|61216291|sp|Q7VIT7|SYC_HELHP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|32262065|gb|AAP77114.1| cysteinyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
Length = 488
Score = 307 bits (785), Expect = 4e-81, Method: Composition-based stats.
Identities = 150/503 (29%), Positives = 236/503 (46%), Gaps = 69/503 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I ++++ +++ F I + IR+YVCGPTVYD AH+G+AR IVFD+ RL + E
Sbjct: 1 MITLFDSAKKQKIPFTPIQDNQIRLYVCGPTVYDDAHLGHARSSIVFDLWRRLFLFLGFE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V+N TDIDDKII+++ Q N ++ I S ++KD L L +P
Sbjct: 61 --VVFVKNFTDIDDKIIKKSLQN------NASVQEIGSHYIHSYLKDMASLGVLRADIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT+++PQM +IQ ++ G+AYE N I+ +++++ +R+
Sbjct: 113 KATDNLPQMCEMIQTLLHKGYAYEGENSDIYLRIHKDKNYGALSQRLEQSHTQSRIQNAQ 172
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGG 237
K DF LWK + ++SP+G+GRPGWHIECSAM +L DIH GG
Sbjct: 173 DKLEHNDFALWKGYKGENDIAYDSPFGKGRPGWHIECSAMIEKHLAYQNEEYGIDIHAGG 232
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE +Q+ CA E A W+HNGF+N+ G KMSKS GN I + L
Sbjct: 233 SDLLFPHHENEASQTRCATGRE-IAKYWLHNGFVNINGEKMSKSLGNSFFIKDAL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------------------- 338
+ + ++R +L HYR ++F + L +++ L K
Sbjct: 287 --KVYDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDKLYRLKKRVIESHIQSPQITRE 344
Query: 339 ----QTSTSKGIIDPAV-------LSALYNDLNTVSAIQALHKLARESTKNHD------- 380
T K A + AL +D N A+ + + S + D
Sbjct: 345 EIKQFTHNIKETAKEAHKTFLSSLVEALSDDYNISKALSIIEDMLSTSNEYLDKNPKDKA 404
Query: 381 ----LLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
+ +LG+ + L++ IE + +R K ++ AD
Sbjct: 405 YKQAIKANLACIEFLLGLGGKSTQSYFQLGLDEKTKQEIESKIAKRQEAKAQKNYALADK 464
Query: 431 IRKQLESKGFILEDYKNPDNGQR 453
+R +L+S+G + D ++
Sbjct: 465 LRDELKSQGIEIMDTPQGSTWEK 487
>gi|288560827|ref|YP_003424313.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
gi|288543537|gb|ADC47421.1| cysteinyl-tRNA synthetase CysS [Methanobrevibacter ruminantium M1]
Length = 480
Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats.
Identities = 168/496 (33%), Positives = 243/496 (48%), Gaps = 78/496 (15%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ R+ E + I+++VCGPTVYD AHIG+ R I FD + R L + V Y++
Sbjct: 1 MTREKGELNTLFADKIKLFVCGPTVYDDAHIGHGRTYISFDTIKRYLEFKGY--SVFYLQ 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
NITDIDDKII RA++ + K ++F++D L + + RAT+HI
Sbjct: 59 NITDIDDKIINRAKESGIDS------KYLAEKFEKRFIEDMAALNVTSVNYFARATDHIE 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+++ IQ +I G+AY + F+ + +YG S RK+++ + R+ KK+P D
Sbjct: 113 EILDQIQRLIDKGYAYVTETGVYFEVAKFEDYGKLSNRKLEDLET-HRIDIDSSKKSPHD 171
Query: 191 FILWKRSTPM----EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
F LWK EP W+SPWG+GRPGWHIE +A++ Y G +DIHGGGLDLIFPHH+
Sbjct: 172 FALWKNREAPEYAGEPVWDSPWGKGRPGWHIEDTAITEKYFGPQYDIHGGGLDLIFPHHD 231
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
+EIAQ E W+H GFLN+ G KMSKS GNFITI ELL + +
Sbjct: 232 SEIAQMEAVSGKEPLVQYWMHTGFLNVSGEKMSKSLGNFITIRELL-------KEYSGDT 284
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------------ 354
RL +L+THYR PIDF+ L +AE +S+ + +
Sbjct: 285 FRLFVLLTHYRSPIDFSEVSLHQAERNVSRIKNYLENLDEKINDIFEKGNLSEDLLKLAE 344
Query: 355 ---------------------------------LYNDLNTVSAIQALHKLARESTKN--- 378
+ +D +T AI A+ ++S K+
Sbjct: 345 LEENEFDEELINFDYFKSNYPALKEGVNEFFTSMDDDFSTPKAIAAIFSFIKQSNKDLEE 404
Query: 379 -----HDLLPI---FNASAHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
DLL I F + ILGI+ K+ + N + ++ + RL L KK+ +
Sbjct: 405 DDLIIDDLLAIKHWFKDISQILGIDFFVYKDETSGNEAELLDIIADVRLKLRAEKKYDLS 464
Query: 429 DYIRKQLESKGFILED 444
D IR +L S G + D
Sbjct: 465 DEIRDKLISLGIEVSD 480
>gi|261749164|ref|YP_003256849.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497256|gb|ACX83706.1| cysteinyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 484
Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats.
Identities = 152/484 (31%), Positives = 223/484 (46%), Gaps = 57/484 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I+IYN+ K F+ I I +YVCGPTVY+ H+GN R I+FD+++R ++
Sbjct: 14 IQIYNSFTGKKELFKPIHKEYIGIYVCGPTVYNHLHLGNCRTFILFDLVFRYFKHLGY-- 71
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V Y+RNITD+ +DKI +R+R E I K T F
Sbjct: 72 KVRYIRNITDVGHLENDSDDGEDKIHQRSRFEGIE------PMEIVQKYTLSFHHILNIF 125
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--FSRRKIDE 172
L P+ +P AT HI + I +IQ +I AYE N + FD S +
Sbjct: 126 NTLPPSIEPTATGHIIEQIDMIQKLIQKNLAYENNGSVYFDVKKYSQLCSYGILSHNRID 185
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
Q K++ DF LWK++ W SPWG+G PGWHIEC+ MS+ YLG+VF
Sbjct: 186 QLFKKESNFLGEKRHFQDFSLWKKAKHSHIMNWNSPWGKGVPGWHIECTTMSTKYLGEVF 245
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIHGGG+DL FPHHE E+AQ+ A+ W+H L L G+KMSKS GN+++ +L
Sbjct: 246 DIHGGGIDLKFPHHECELAQAIGVYNKNHLAHYWMHTNMLTLNGKKMSKSTGNYLSTKDL 305
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
+ + +IR +L +HYR ++F+ + L +AE +
Sbjct: 306 VS-------KYHPIIIRFFILQSHYRSLLNFSQKGLIDAEKGYHRLINAIEKLEFFSKSD 358
Query: 349 -------------PAVLSALYNDLNTVSAIQALHK----LARESTKNHDLLPIFNA---- 387
A+ +D NT I L + L D + +
Sbjct: 359 KKNISKFDVNKWIKNCYEAINDDFNTPLLISHLFQVIHILNHSINYIGDSIHLLKKYMNH 418
Query: 388 -SAHILGIEVCK----EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
ILG++ + E +K + I E L++ R+ K + + +D IR++L G L
Sbjct: 419 FLFDILGLQKIEKNPFEKTSKKLKILTEILIKIRIEARKKRNWVLSDLIREELSRIGISL 478
Query: 443 EDYK 446
D K
Sbjct: 479 HDDK 482
>gi|167045622|gb|ABZ10271.1| putative tRNA synthetases class I (C) catalytic domain protein
[uncultured marine microorganism HF4000_APKG10K24]
Length = 754
Score = 306 bits (784), Expect = 4e-81, Method: Composition-based stats.
Identities = 155/476 (32%), Positives = 227/476 (47%), Gaps = 40/476 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++I+NTL ++I E Q I+P +RMY CGPTVY AHIGN R ++ D + R L E
Sbjct: 24 LRIFNTLTKQIEEIQPIEPGKVRMYTCGPTVYRDAHIGNLRTYLMADWIRRALEIKGIE- 82
Query: 65 CVTYVRNITDI-----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V +V+NITD+ DK+I A +E + I +F D R
Sbjct: 83 -VHHVKNITDVGHMRQELVEAGGDKMILAALEEGKTT------QDIAQFYADRFHADEAR 135
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
+ L P AT HIP+M+ +++ ++ +G+AYEA I F+ +S +YG SR +
Sbjct: 136 MNILPAHVFPWATQHIPEMVAIVEKLMANGNAYEAGGNIYFNVNSFADYGKLSRNTGADL 195
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
G R KK+P DF LWK + P W SPWG G PGWHIECSAM+S Y G+ FD
Sbjct: 196 LEGVRAEADPLKKDPRDFTLWKAAEPGRDLKWASPWGDGFPGWHIECSAMASKYFGESFD 255
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
+H GG+D IFPHHE+EIAQS A ++ W+H L +G KM+KS+GN I EL+
Sbjct: 256 LHTGGVDNIFPHHEDEIAQSEAAFG-QQHVRYWVHAQHLLADGAKMAKSSGNVFLIEELI 314
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----------RLTEAEILLSKWPQTST 342
R + R L YR ++FT + + + P+ S
Sbjct: 315 ------FRGFDPLAFRYLCLTVRYRHRMNFTFNSLRAAEKALTSMRQRFWIWKGLPELSQ 368
Query: 343 SKGIIDPAVLSAL---YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKE 399
+D NDL+ A+ + + L + I G+++
Sbjct: 369 LPSEVDEWRRKFWESVENDLDLPGALALTWDMFKSDLPGQAKLALLIEFDEIFGLDLDAL 428
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ +I + V +R L ++ AD IR + S+GF++ED + T
Sbjct: 429 SKSHDIPAPVTAAVGQRESLRYNSDYAPADTIRTDVLSQGFLVEDTGEIARVRPKT 484
>gi|257068447|ref|YP_003154702.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
gi|256559265|gb|ACU85112.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
Length = 481
Score = 306 bits (784), Expect = 5e-81, Method: Composition-based stats.
Identities = 151/498 (30%), Positives = 234/498 (46%), Gaps = 62/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++T R F + P + +YVCGPT H+G+ R + FDVL R L
Sbjct: 1 MTLHLHDTATRTTAPFTPVQPGAVSLYVCGPTTQGDPHLGHLRTFLAFDVLVRWLERSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN+TDIDDKI+ + S + A + + ++F R+ PT++
Sbjct: 61 E--VAHVRNVTDIDDKILVK------SAEADAAWWAWSLRFEREFQDTLDRIGNRRPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P+MI L++ +I GHAY + FD +S P YG+ +R+ +++ +
Sbjct: 113 PRATGHVPEMIALMERLIERGHAYADGAGSVYFDVASHPGYGALTRQSLEDMQ-DAGEEM 171
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K++ DF LWK + P EP W++P+GRGRPGWH+ECSAM+ YLG+ FDIH GGL
Sbjct: 172 EPGKRDRHDFALWKAAKPTEPETASWDTPFGRGRPGWHLECSAMARKYLGESFDIHAGGL 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+H+G + ++G KM KS NF+T L
Sbjct: 232 DLRFPHHENEQAQSHAAGYG--FAQRWMHSGMVTVDGMKMGKSLDNFVTAARALAEH--- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------SKWPQT 340
PAP +RLA++ HYR +++ + EAE + +
Sbjct: 287 ----PAPAVRLALVSGHYRATVEYNATAMREAETVWERFRATAARAAERLEGAPLAAAEA 342
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIFNAS 388
+ + +A+ +DL A+ +H+ L A
Sbjct: 343 PLADVELPAEFTAAMDDDLAVPEALAVVHREQAALNTLLAAPGTAPSAEVTSSLGRLRAM 402
Query: 389 AHILGIEVCKEHLNKN----------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
+LG++ ++ + I + R K ++ AD +R L +
Sbjct: 403 LDVLGLDPLGAQWGQDQGVSGAEHAALDALISSQLAAREAARAEKDWARADALRDALTAA 462
Query: 439 GFILEDYKNPDNGQRMTR 456
G +ED ++ TR
Sbjct: 463 GIRIEDGQDGARWTLETR 480
>gi|218781656|ref|YP_002432974.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
gi|218763040|gb|ACL05506.1| cysteine synthase [Desulfatibacillum alkenivorans AK-01]
Length = 756
Score = 306 bits (783), Expect = 5e-81, Method: Composition-based stats.
Identities = 131/477 (27%), Positives = 214/477 (44%), Gaps = 53/477 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + +YNT R F I P MY CGPT + +G+ R + D+L R L Y
Sbjct: 299 KSGLSLYNTAIRSKESFTPIKPGKAGMYSCGPTANEPMGLGHCRRFVFADLLSRYLTYKG 358
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V ++ NITD+DDK IE +++ + T K QF++D L
Sbjct: 359 LD--VKHIINITDMDDKTIEGSQEAGMGLE------EFTQKYIDQFMEDIETLGVKPAEA 410
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRA+ H+ M+ + + G AYE + FD S + YG S +D+ ++G V
Sbjct: 411 YPRASKHVDDMVEIASKLAGTGFAYEKMRSLYFDISRLEGYGDLSGIDLDKIRLGATVEL 470
Query: 182 KYHK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++ NP DF L+KRS E ++ WG RP WHI+C+AMS YLG+ +DIH
Sbjct: 471 DDYEKDNPRDFTLFKRSRLNELKRGIFVKTEWGNVRPSWHIQCTAMSMKYLGETYDIHTA 530
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
DL+FPHHENE+A + + AN W+H + ++ + IT+ +L +
Sbjct: 531 SRDLVFPHHENEVAIAKALTG-KPLANYWLHCDQVIVDEKDAWPE---KITLQDLKD--- 583
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG----------- 345
+ + IR +L THYR+P+ T+ L A L + +
Sbjct: 584 ---KGYTGRQIRFWLLATHYRKPLHLTLASLDSAAKGLERLDHFVEALQNADGARTNADV 640
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASA 389
I ++A+ +DL+ +A+ +L + ++ + + +L +
Sbjct: 641 DQLLYDIKQGFIAAMDDDLSVSAALSSLFAVVKKVNRLASQNALGSSGANKILEALRKTD 700
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
+LG+ I L+++R +++AD IR QL ++G + D K
Sbjct: 701 QVLGVLSFDAEPQ---DAEISALMEKREKARAEGDYAAADAIRDQLTARGVTVRDGK 754
>gi|302348041|ref|YP_003815679.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
gi|302328453|gb|ADL18648.1| Cysteinyl-tRNA synthetase [Acidilobus saccharovorans 345-15]
Length = 476
Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats.
Identities = 167/498 (33%), Positives = 230/498 (46%), Gaps = 65/498 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL R+ F+ P + MYVCGPTVYD+ HIG+A+ + FD + R L
Sbjct: 1 MTLTVTNTLGRREEVFRPWSPPLVTMYVCGPTVYDYVHIGHAKTFVAFDGIKRYLSLIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+NITDIDDKII+RA S + Q +++ +RL
Sbjct: 61 --SVYHVQNITDIDDKIIKRASDRGVS------WKEVADSYAQDYLESLSRLNIR-VDLH 111
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T+HI ++I I +I G+AY + + FD + P+YG S
Sbjct: 112 PRVTSHINEIIDFIGKLIEKGYAYVAPSGSVYFDVDAYPDYGRLSGNFNKALWDQGEGVV 171
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK + P EP WESPWGRGRPGWHIECS MSS YLG DIHGGG DLI
Sbjct: 172 SE-KRHPYDFALWKAAKPGEPWWESPWGRGRPGWHIECSVMSSRYLGSRIDIHGGGSDLI 230
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE AQS W+H G L + G KMSKS GN +++ + +
Sbjct: 231 FPHHENERAQSESLFG-GPWVKYWLHTGMLTIRGEKMSKSLGNIVSLRDAI-------NE 282
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTSTSKGI 346
W VIR+ +L +HYR ++++ Q L +A+ L+ +
Sbjct: 283 WGPNVIRMWVLTSHYRGSLEYSEQSLGQAKKLVERLRDIASDVVKRLSKEEYVNYMKAAD 342
Query: 347 IDP---------AVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPI 384
+D +A+ D N A ++ L E K + +L
Sbjct: 343 VDELFKLRSLYLNWHAAMQRDFNMGEAAGSVWALTSEYYKYIASSESRALIAFTYKMLVD 402
Query: 385 FNASAHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
FN +L + + I+ LV+ R L K K + ADYIR +L S G
Sbjct: 403 FNRVYAVLDDIFERAPMAPVASLEDQLIDLLVEVRSQLRKNKMYDLADYIRSKLASYGIT 462
Query: 442 LEDYKNPDNGQRMTRWKQ 459
L D T WK+
Sbjct: 463 LVDKG------EETTWKR 474
>gi|308176323|ref|YP_003915729.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
gi|307743786|emb|CBT74758.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
Length = 483
Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats.
Identities = 169/492 (34%), Positives = 243/492 (49%), Gaps = 54/492 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T + +FQ + +++Y CG TV H+G+ R IVFDVL R L Y
Sbjct: 1 MSLRFYDTKTASVRDFQPLAEGEVKLYYCGATVQGMPHVGHVRSAIVFDVLVRWLEYRGF 60
Query: 63 EKCVTYVRNITDIDDKIIERAR-------QEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
VT VRN+TDIDDKI+E++ + + + + Q+F + L
Sbjct: 61 --AVTTVRNVTDIDDKILEKSANSFAEDFEADAHYRPREEWYALAYRFEQEFARAYEALG 118
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDE 172
PT++PRAT HI +M LI +I GHAY + ++ FD S YG+ +R+KID+
Sbjct: 119 VRRPTYEPRATGHITEMHELISQLIERGHAYPAADDSGDVYFDVRSYEQYGALTRQKIDD 178
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + KK+P DF LWK ++P W SPWGRGRPGWH+ECSAM+ YLG
Sbjct: 179 MQDAPDSDPR-GKKDPRDFALWKGLKDIDPPTASWPSPWGRGRPGWHLECSAMAGKYLGS 237
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGGLDL FPHHENE+AQS A AN W+HNG + EG KMSKS GN I+
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSNAAGHG--FANFWMHNGMVTYEGEKMSKSIGNTISPE 295
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK----- 344
E+L A V+R + YR +D+ LTEA + + ++
Sbjct: 296 EMLALA-------DARVVRYFLGQAQYRSMLDYRPDSLTEAGAAVERIDTFISNARYRLG 348
Query: 345 --------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
+ A +A+ +DLN A+ ALH+ R + D L A
Sbjct: 349 AAAEAIAATEVPEAFGTAMDDDLNVPMALAALHETVRLGNASRDSRDDAATAKALGQVLA 408
Query: 388 SAHILGIEVCKEHLNKNISIA---IEKLVQERL----ILLKMKKFSSADYIRKQLESKGF 440
+LG++ H +++ S +++LVQ +L K ++ +D IR L S G
Sbjct: 409 MTQVLGLDDAGSHESQDSSAEHAALDQLVQAQLAERAKARAAKDWARSDAIRDALGSAGI 468
Query: 441 ILEDYKNPDNGQ 452
+ D +
Sbjct: 469 TVADSADGARWT 480
>gi|88603422|ref|YP_503600.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|88188884|gb|ABD41881.1| cysteinyl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 423
Score = 306 bits (783), Expect = 6e-81, Method: Composition-based stats.
Identities = 159/440 (36%), Positives = 230/440 (52%), Gaps = 24/440 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+TL R + FQ + P + ++VCGPTVY++ H+G+AR +VFDVL + LR+ E
Sbjct: 1 MQLYSTLSRMVEPFQTLYPDRVSLFVCGPTVYNYPHLGHARTYVVFDVLAKYLRWTGQE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITD+DDKII RA++E S + K ++++KD L + ++ R
Sbjct: 60 -VLYIQNITDVDDKIINRAQEEKISQ------KDLARKFEREYIKDMLSLGIDSVSYHAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT HIP++I I+ ++ G Y + F+ S P G S + D++
Sbjct: 113 ATTHIPEIINQIERLVGIGVGYITETGVYFNIDSFPRNGELSGQSKDKRISRVT---DTK 169
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NPADF+LWKR E W+SPWGRGRPGWHIE +A++ Y G+ +DIHGGGLDLIFPH
Sbjct: 170 KHNPADFVLWKRGEYGEYTWDSPWGRGRPGWHIEDTAITEKYFGQQYDIHGGGLDLIFPH 229
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HE EIAQ + W+H GFL +EG KMSKS GNFI I + L ++W
Sbjct: 230 HEAEIAQMESLEGKHPMVRYWMHTGFLTVEGEKMSKSLGNFIKIQDAL-------KTWDK 282
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
+IR +L++HYR P+ + + L A+ L + + P A + +
Sbjct: 283 DIIRYFILLSHYRSPLQVSEEGLLNAKKALEHIRAIAITDNGPYPEGRDAFIAAMESDLN 342
Query: 365 IQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
+ DL + ILGI E S + L R L K+
Sbjct: 343 TPNAIAAIHALAAHGDLEALIEY-GEILGIRFLPET-----SAPLSILQDIRAELRASKQ 396
Query: 425 FSSADYIRKQLESKGFILED 444
F AD IRK++ G + D
Sbjct: 397 FEIADMIRKKIADAGIQVTD 416
>gi|313902850|ref|ZP_07836247.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|313466970|gb|EFR62487.1| cysteinyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 529
Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats.
Identities = 136/345 (39%), Positives = 191/345 (55%), Gaps = 16/345 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IYNTL + F+ ++P +RMY CGPTVYD+ H+GN R + FDV+ L Y
Sbjct: 1 MAIQIYNTLTGQKEPFEPLEPGRVRMYNCGPTVYDYFHVGNLRTFLFFDVVRGWLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y++N TDIDDK+I RA + S+ + + + + +D L +
Sbjct: 61 --RVRYIQNFTDIDDKLIRRAAERGISV------KELADEQIRAYFEDADALGIVRADVH 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + I +I LIQ +I G+AY AN ++ FD S +YG S ++ ++ G RV
Sbjct: 113 PRVSEKIGAIIGLIQRLIDQGYAYVANGDVFFDVSRFRDYGKLSGQRTEQLLAGARVEAS 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+K+NP DF LWK P EP W+SPWG GRPGWHIECSAM+ LG DIH GG DL+F
Sbjct: 173 ENKRNPLDFALWKAQKPGEPAWDSPWGPGRPGWHIECSAMAMDELGTTLDIHSGGSDLVF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + A W+H + + G++M KS GNF + +L +
Sbjct: 233 PHHENEIAQSEAATG-QPFARYWMHVALVQVGGQRMGKSMGNFWRVRDLRAR-------F 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
IRL +L HYR P++F+++ L +AE + +
Sbjct: 285 HPEAIRLFILSAHYRNPLEFSLEALEQAERARQRLTNFIAHLEHL 329
Score = 81.7 bits (200), Expect = 3e-13, Method: Composition-based stats.
Identities = 27/127 (21%), Positives = 43/127 (33%), Gaps = 12/127 (9%)
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNAS 388
A+ +D NT A+ AL LAR+ K L +
Sbjct: 390 DWPARLAQARAEFEQAMDDDFNTADALAALFTLARDGHKALGPGSPRAWIQATLDLIRDL 449
Query: 389 AHILGIEV--CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
L + + ++ LV+ R ++ + AD IR +L G+ILED
Sbjct: 450 GRPLRLFRTGAAGEPAGDAQALLDLLVEVRQYARSIRDYELADRIRDRLAELGYILEDTP 509
Query: 447 NPDNGQR 453
+R
Sbjct: 510 AGTRVRR 516
>gi|225022147|ref|ZP_03711339.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
ATCC 33806]
gi|224945080|gb|EEG26289.1| hypothetical protein CORMATOL_02180 [Corynebacterium matruchotii
ATCC 33806]
Length = 445
Score = 305 bits (782), Expect = 7e-81, Method: Composition-based stats.
Identities = 136/458 (29%), Positives = 204/458 (44%), Gaps = 51/458 (11%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MY+CG T HIG+ R + FD++ R L + V +VRN+TDIDDKI+ +A +
Sbjct: 1 MYLCGATPQTNPHIGHVRSGVAFDIVRRWLMASGYD--VAFVRNVTDIDDKILTKAAE-- 56
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N S + F L L P+ +PRAT H+ QMI +Q +I G AY
Sbjct: 57 ----ANRPWWEWVSTYERAFSHAYDMLGVLPPSVEPRATGHMTQMITYMQRLIDAGFAYP 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK---KNPADFILWKRSTPMEPGW 204
A + FD ++ + + + ++P DF LWK + P EP W
Sbjct: 113 AQGSVYFDVAAWSAADGSDYGSLSGNNLVDMEQGETDNVGKRSPQDFALWKAAKPGEPSW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+PWG GRPGWH+ECSAMS+ YLG FDIHGGGLDL FPHHENEIAQ+ A A
Sbjct: 173 PTPWGDGRPGWHLECSAMSTWYLGPEFDIHGGGLDLQFPHHENEIAQAHAAGDG--FARY 230
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+HN ++ + G KMSKS GN +++ E+++ + +R + HYR ++++
Sbjct: 231 WMHNHWVTIAGEKMSKSLGNVLSVPEIVKLVR-------PVELRYYLGSAHYRSVLEYSP 283
Query: 325 QRLTEAEILLSKWPQT-----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
L EA + G A A+ +D+ A+ +H R
Sbjct: 284 DALQEAAQGYRRIETFVEKVDDLPGQPPVPVGEWTDAFAEAMNDDIGVPRALAEIHNTVR 343
Query: 374 ESTKNHDLLPI---------FNASAHILGIEVCKEHLNK-----------NISIAIEKLV 413
+ A +LG + + + +++ +
Sbjct: 344 AGNSALAMRDYGEARRMAARVRAMTEVLGFDPLSDQWQDGESVRFDAPMVALDALVQEEL 403
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
R I +K + +AD +R +L G I+ D
Sbjct: 404 NRREIARSVKDWETADAVRDRLLEVGIIVTDTPEGPTW 441
>gi|297242895|ref|ZP_06926833.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889106|gb|EFH27840.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 545
Score = 305 bits (782), Expect = 9e-81, Method: Composition-based stats.
Identities = 151/541 (27%), Positives = 222/541 (41%), Gaps = 110/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT F P + MYVCG TV HIG+ R I FD++ R +
Sbjct: 19 NLHLYNTASHSTNTFVPKKPGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY- 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI+++A + ++F K L LAPT +P
Sbjct: 78 -KVTFVRNVTDIDDKIMKKANESG------QNWWERAYIYEREFTKSYNTLGVLAPTVEP 130
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M+ LI+ +I GHAY + FD S +YG + + ++ +
Sbjct: 131 RATGHITDMVELIERLIERGHAYVINDSDGNPTGNVYFDVPSWEHYGELTHQNQNQNETC 190
Query: 177 --------------------------TRVPEKYHKKNPADFILWKRSTP---MEPGWESP 207
K +P DF LWK + W++P
Sbjct: 191 ADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKTP 250
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+G GRPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A E A++W+H
Sbjct: 251 FGEGRPGWHIECSAMSHRYLGDDFDIHGGGLDLRFPHHENEMAQTRAA-GWES-ADVWMH 308
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
+ ++ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L
Sbjct: 309 SAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQAL 361
Query: 328 TEAEILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALH 369
E++ + G + A+ +D+N AI +
Sbjct: 362 VESKSAYDRIMNFLERAGRLLDKKPTCEEVHSVNADELPEDFTRAMNDDINVSGAIAEIF 421
Query: 370 KLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN----- 404
R+ D A LG++ + N
Sbjct: 422 TTIRQGNALIDDCSKDSSQAQSESVQKLIYLAVLQVRAMLDTLGLDPYAKTWASNDNQSS 481
Query: 405 --------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ I ++ R K K F++AD IR L + G ++ D +
Sbjct: 482 AEGSNGKESKEYSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQGSS 541
Query: 451 G 451
Sbjct: 542 W 542
>gi|313900429|ref|ZP_07833922.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
gi|312954491|gb|EFR36166.1| cysteine--tRNA ligase [Clostridium sp. HGF2]
Length = 445
Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 235/466 (50%), Gaps = 50/466 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+N++ +K+ EF+ + + + MYVCGPTVY++ HIGNARP++VFD L R +
Sbjct: 1 MKIFNSMNQKVEEFKPLHENEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TD+DDKII+ A++ S + IT K + D L P PR
Sbjct: 59 NVKMVSNYTDVDDKIIKVAKECGVSE------AEITEKFIDAYNHDRLSLHAAMPDAAPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + +I I+ ++ GHAYE ++ F +S+ +YG S ++I++ +G R+ E
Sbjct: 113 VTETMDAIIAFIKLLVDKGHAYEMEGDVYFRVNSVESYGKLSNQQIEDLLVGARIDENSK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLDLIF 242
K+NP DF LWK+ T W+SPW GRPGWH EC M + G DIHGGG+DL F
Sbjct: 173 KENPLDFTLWKK-TEEGIKWDSPWSVGRPGWHTECVVMINQEFGGEHTIDIHGGGMDLKF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A AN WIHNG +N++G KMSKS GN I +++
Sbjct: 232 PHHENEIAQSRAAYD-SPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIA-------KI 283
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKGI 346
V+R ML HYR P++ + + A+ L++
Sbjct: 284 GGNVLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLGLADVDMDETCDEE 343
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIE 395
L A+ +D+NT +A A+ + + + L+ +LGIE
Sbjct: 344 QLAPFLDAMQDDMNTPNAFAAVFETVKALNQALRQREIDLQAVKALVRTLEKMMDVLGIE 403
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ + +++ ++L ++ +K K F +AD R +L KG +
Sbjct: 404 LLRLTMSEED----KQLHRQWKAAVKEKDFETADQYRAKLIEKGIL 445
>gi|294791389|ref|ZP_06756546.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
gi|294457860|gb|EFG26214.1| cysteine--tRNA ligase [Scardovia inopinata F0304]
Length = 589
Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats.
Identities = 155/589 (26%), Positives = 233/589 (39%), Gaps = 156/589 (26%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++IY+T I +F I P +YVCG TV H+G+ R + FD++ R L
Sbjct: 21 QKVRIYDTARHAIVDFTTITPGKATIYVCGATVQSSPHVGHLRAGVAFDLIRRWLMKLGY 80
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V +VRN+TDIDDKI++++ + +F K L L PT++
Sbjct: 81 E--VVFVRNVTDIDDKILDKSAAQG------QNWWARAYYYEAEFTKAYHTLGVLNPTYE 132
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRR------- 168
PRAT HIP MI L+Q +I GHAY + + FD S YG+ + +
Sbjct: 133 PRATGHIPDMINLVQRLIDRGHAYIIPNPDGSPSGNVYFDVPSWSQYGALTHQESGVSSG 192
Query: 169 -------------------------------KIDEQKMG-------------TRVPEKYH 184
+I + +
Sbjct: 193 QPDGETESGSLAEADSSEADSSEADSLAEAARIADAIAPSVDAPGNDKYNPTDPADQSER 252
Query: 185 KKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K +P DF LWK S P +P W++P+G GRPGWH+ECS MS YLG FDIHGGGLDL
Sbjct: 253 KHDPRDFALWKASKPTDPPSARWQTPFGTGRPGWHLECSTMSRKYLGDDFDIHGGGLDLR 312
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQS A A+ W+H+ ++ +G KMSKS GN ++I+ +L
Sbjct: 313 FPHHENEMAQSRAAGWG--FAHYWMHSAWVTEKGEKMSKSLGNGLSIDSVLT-------H 363
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------------- 346
+ ++R A++ HYR +++ Q L EA+ ++ G
Sbjct: 364 YSPWMVRYALVTVHYRSMLEWGDQTLEEAKSAYTRIMNFVDRAGELTGQPSRDEVSSLTA 423
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLAREST-------------------------KNH 379
+ ++A+ D N A+ A++ R
Sbjct: 424 DNLPSDFVTAMNEDFNVSPALAAIYTSIRRGNGFINEENWQNANESHAQQTDRSSLSSLK 483
Query: 380 DLLPIFNASAHILGIEVCKEHL------------------------------NKNISIAI 409
+L + + G++ + + +
Sbjct: 484 KILLQVRSMLDVFGLDPLDPQWLPGGDGFPAYSPVGQKSSAAPAGSSSAVSALEALEALV 543
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ R K K F+ AD IR L G +ED + T WK
Sbjct: 544 SDQLDRRQEARKNKDFAQADAIRDSLNQAGITIEDS------PQGTSWK 586
>gi|325962199|ref|YP_004240105.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323468286|gb|ADX71971.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 488
Score = 305 bits (781), Expect = 1e-80, Method: Composition-based stats.
Identities = 162/496 (32%), Positives = 229/496 (46%), Gaps = 58/496 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T ++ F + +Y CG TV H+G+ R I FD L R L +
Sbjct: 1 MTLRFYDTASAEVRNFVPLVEGKASLYYCGATVQGMPHVGHIRSAIAFDQLTRWLAFRG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQE-------HPSIPINDAISIITSKNTQQFVKDTTRLA 115
VT VRN+TDIDDKI+ ++ + + + ++F+K L
Sbjct: 60 -LRVTVVRNVTDIDDKILAKSEASFAPGFQPEAGEVPEEEWWALAYRYEREFLKAYDILG 118
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDE 172
PT++PRAT HIP+M LIQ +I GHAY + ++ FD S YG+ +R+ ID+
Sbjct: 119 VSRPTYEPRATGHIPEMHALIQQLIDRGHAYPALDDSGDVYFDVRSWSKYGALTRQNIDD 178
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + KK+P DF LWK S EP W SPWG GRPGWH+ECSAM + YLG
Sbjct: 179 MQAAPDADPR-GKKDPRDFALWKGSKEGEPTTASWASPWGAGRPGWHLECSAMVTKYLGT 237
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FDIHGGGLDL FPHHENE+AQS A AN W+HNG + EG KMSKS GN I+
Sbjct: 238 EFDIHGGGLDLRFPHHENEMAQSQAAG--HPFANFWMHNGMVTYEGEKMSKSIGNTISPA 295
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--- 346
E+LE V+R + HYR +D+ L EA + +
Sbjct: 296 EMLELA-------SPRVVRYYLGQAHYRSVLDYRPTSLQEAAAAVERIDGFLAKAAARFG 348
Query: 347 ---------------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LL 382
A A+ +DLN A+ ALH+ R L
Sbjct: 349 KEQGSVDGGSGPSSNAMEAFSEAMDDDLNVPRALAALHETVRAGNTALAEGNDDDARLAL 408
Query: 383 PIFNASAHILGIEVCK--EHLNKNISIAIEKLV----QERLILLKMKKFSSADYIRKQLE 436
+LG++ + + + A++ LV R K ++++D IR+ L
Sbjct: 409 DTVRVMTDVLGLDAVAGIDAGSGKEAAALDVLVQAQLAARAAARAQKDWAASDAIRETLA 468
Query: 437 SKGFILEDYKNPDNGQ 452
G ++ED +
Sbjct: 469 HAGIVVEDGPDGATWT 484
>gi|311063769|ref|YP_003970494.1| cysteinyl-trna synthetase CysS [Bifidobacterium bifidum PRL2010]
gi|310866088|gb|ADP35457.1| CysS Cysteinyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
Length = 540
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 155/539 (28%), Positives = 229/539 (42%), Gaps = 106/539 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+T ++ F I P + +YVCG TV HIG+ R + FDV+ R + +
Sbjct: 25 LKLYDTASHTVSRFTPIKPGQVGIYVCGATVQSSPHIGHIRAAVAFDVVRRWMLRLGYQ- 83
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+VRN+TDIDDKI+++ + ++F + L L PT++PR
Sbjct: 84 -VTFVRNVTDIDDKILDK------AAAAGQQWWARAYFYEREFTQAYDTLGVLPPTYEPR 136
Query: 125 ATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG- 176
AT H+ MI LI+ II +GH Y + + FD +S P+YG + +K +
Sbjct: 137 ATGHMIDMIDLIRRIIDNGHGYVVYDADGKPTGNVYFDVASWPHYGELTHQKQGAAEADE 196
Query: 177 -----------------------TRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR 210
K +P DF LWK P +P W +P+G
Sbjct: 197 AAAVADLMGPSVDAAGDDKYNPIDPADASPDKHDPRDFALWKAPKPTDPQDARWSTPFGV 256
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
GRPGWHIECSAMS YL +FDIHGGGLDL FPHHENE+AQ+ A E A W+H+ +
Sbjct: 257 GRPGWHIECSAMSHRYLDGMFDIHGGGLDLRFPHHENEMAQTR-AVGYESAAR-WMHSAW 314
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ +G KMSKS G +++ +L A V+R A+ YR ++++ Q L EA
Sbjct: 315 VTAKGEKMSKSLGTGLSVPSVLAEH-------SAWVVRYALGSVQYRSMLEWSDQALVEA 367
Query: 331 EILLSKWPQTSTSKG------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + G + +SA+ +D+N A A+
Sbjct: 368 QAAYERIMNFIERAGVALGEQPERAEIAGVSADDLPADFVSAMNDDVNVSGATAAIFTAI 427
Query: 373 RESTKNHDLLP-----------------IFNASAHILGIEVCKEHLN------------- 402
R L A LG++ E
Sbjct: 428 RNGNTLLSKLDDRADGDAARAEVRSALVAVRAMLDALGLDPLAEPWAGAAGADGNGESRE 487
Query: 403 -KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ I + + R K + F+ AD IR L + G +ED G + + W K
Sbjct: 488 HDVLDALITEQLNARAEARKSRDFAKADAIRDALGAAGIAIED------GPQGSTWSLK 540
>gi|167467942|ref|ZP_02332646.1| cysteinyl-tRNA synthetase [Yersinia pestis FV-1]
Length = 336
Score = 305 bits (780), Expect = 1e-80, Method: Composition-based stats.
Identities = 147/338 (43%), Positives = 203/338 (60%), Gaps = 17/338 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY
Sbjct: 1 MLKIFNTLSRQKEEFKPIHAGKVGMYVCGITIYDLCHIGHGRTFVAFDVVARYLRYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+TYVRN+TD+DDKII+RA + N+ +T++ + KD L P +P
Sbjct: 60 -SLTYVRNVTDVDDKIIKRAIEN------NETCEQLTTRMLAEMHKDFDALNLERPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I + + +I GHAY +N +++F S P+YG SR+ +D+ + G RV
Sbjct: 113 RATHHIAEIIEMTERLIARGHAYVASNGDVMFAVDSDPDYGVLSRQDLDQLQAGARVEVA 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S P EP WESPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKPGEPRWESPWGPGRPGWHIECSAMNGKQLGAHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS CA N W+H+G + ++ KMSKS NF TI ++L +
Sbjct: 233 PHHENEIAQSTCAHD-GPYVNYWMHSGMVMIDKEKMSKSLNNFFTIRDVLA-------YY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
A +R ++ HYR ++++ + L +A
Sbjct: 285 DAETVRYFLMSGHYRSQLNYSEENLKQARAFTGALYTA 322
>gi|145630616|ref|ZP_01786395.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983742|gb|EDJ91192.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 369
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 150/338 (44%), Positives = 204/338 (60%), Gaps = 17/338 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDTLNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP++I +++ +I GHAY N +++FD S YG SR+ + + + G R+
Sbjct: 113 RATHHIPEIIEIVEKLIKRGHAYVADNGDVMFDVESFKEYGKLSRQDLGQLQAGARIEIN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KKNP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG+ FDIHGGG DL+F
Sbjct: 173 EIKKNPMDFVLWKMSKENEPSWASPWGAGRPGWHIECSAMNCKQLGEHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQSCCA + N WIH+G + ++ KMSKS GNF TI ++L +
Sbjct: 233 PHHENEIAQSCCAHGGQ-YVNYWIHSGMIMVDKEKMSKSLGNFFTIRDVL-------NHY 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
A +R +L HYR ++++ + L A+ L +
Sbjct: 285 NAEAVRYFLLTAHYRSQLNYSEENLNLAQGALERLYTA 322
>gi|284040387|ref|YP_003390317.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
gi|283819680|gb|ADB41518.1| cysteinyl-tRNA synthetase [Spirosoma linguale DSM 74]
Length = 499
Score = 304 bits (778), Expect = 2e-80, Method: Composition-based stats.
Identities = 149/509 (29%), Positives = 225/509 (44%), Gaps = 71/509 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YNTL RK F A++ + MYVCGPTVY++ H+GN R + FD LYR L +
Sbjct: 1 MQPLQLYNTLSRKKEPFVALNAPYVGMYVCGPTVYNYVHLGNVRTFLTFDTLYRYLTFIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRN+TD+ +DKI A+ E I + T F
Sbjct: 61 Y--KVRYVRNLTDVGHLVGDGDDGEDKIGRMAKLEKVE------PMEIVQRFTNDFHTVM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----NYGSFSR 167
+ P+ +P AT H+ + I +Q ++ +G AYE+N + FD + NYG S
Sbjct: 113 AQFNTFPPSIEPTATGHMVEQIEAVQTLLANGLAYESNGSVYFDIDTYNKRGGNYGKLSG 172
Query: 168 RKIDE-QKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R +D+ + + K++P DF +WKR+ P W SPWG G PGWH+EC+ MS+
Sbjct: 173 RILDDLLNETRELDGQSEKRSPLDFAIWKRAAPEHLMRWNSPWGEGFPGWHLECTCMSTK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLGK FDIHGGG+DL FPHHE EIAQ ++ W+H+ L + G+KMSKS GN
Sbjct: 233 YLGKQFDIHGGGMDLKFPHHECEIAQGDGLTGVDP-VRYWMHSNMLTVNGQKMSKSLGNS 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
EL + + +R ML +HYR +DF+ L A+ +
Sbjct: 292 FLPAELFAGSHPLLDQPYSPMTVRFFMLQSHYRSTLDFSNDALKAAQKGYRRLANGLRVI 351
Query: 345 GIID-------------------------PAVLSALYNDLNTVSAIQALHKLAREST--- 376
+ A+ +DLNT AI L L +
Sbjct: 352 KTLSYPSDAEAENGVAVDEAKQKEIQKAVQQFYDAMNDDLNTAVAIAQLFTLLKYVNMLY 411
Query: 377 --------KNHDLLPIFNASA-----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMK 423
+ + S +LG+ + E L+ + +
Sbjct: 412 LNQLQAAVLGEETFNLLKESFVTFMQDVLGLLEEGATNQPVL----EGLLTLYKEYKEQR 467
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQ 452
++ D IR +++G ++D K+ +
Sbjct: 468 QYDKVDQIRSYFKAQGLAIKDMKHQIDWA 496
>gi|222612964|gb|EEE51096.1| hypothetical protein OsJ_31805 [Oryza sativa Japonica Group]
Length = 561
Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats.
Identities = 174/551 (31%), Positives = 262/551 (47%), Gaps = 116/551 (21%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + F+ + MYVCG T YD++H+G+AR + FDVL+R L+Y E
Sbjct: 21 ELRLFDTRTKAAVPFRPRVEGKVAMYVCGVTPYDYSHVGHARAYVAFDVLFRYLKYLGFE 80
Query: 64 --------------------------------------KCVT-YVRNITDIDDKIIERAR 84
VT ++ I D+ KII+RA
Sbjct: 81 IIKRANEAGEDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIIKRAN 140
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + ++S+ +F +D L CL PTH+PR T HI Q+I LI I+ +G
Sbjct: 141 EAG------EDALSLSSRFIDEFHRDMYELQCLPPTHEPRVTKHIEQIIDLITKIMDNGK 194
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
AY ++ F + P+Y S S RK+D+ + GTRV K+NPADF LWK + EP W
Sbjct: 195 AYTIEGDVYFSVDNFPDYLSLSGRKVDQNRPGTRVAVDARKRNPADFALWKSAKEGEPSW 254
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
ESPWGRGRPGWHIECSAMS+HYLG +FDIHGGG DLIFPHHENE+AQS A E
Sbjct: 255 ESPWGRGRPGWHIECSAMSAHYLGNIFDIHGGGKDLIFPHHENELAQSQAAY-PESEVKC 313
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+HNGF+N +G+KM+K++ NF TI +++ + +RL ++ THYR ++ +
Sbjct: 314 WMHNGFVNKDGQKMAKADKNFFTIRDIISL-------YHPMALRLFLMRTHYRSDVNHSD 366
Query: 325 QRLTEAEILLSKWPQTSTS------------------------KGIIDPAVLSALYNDLN 360
L A L QT L + +DL+
Sbjct: 367 TALQFASGRLYYIYQTLHDGEETVSLYGEHKLENSIPADDQKLIEENRSNFLEKMSDDLH 426
Query: 361 TVSAIQALHKLAREST----------------KNHDLLPIFNAS-------AHILGI--- 394
T +A+ L KL ++ K D + A ILG+
Sbjct: 427 TTAALDHLMKLQQKLEHQKKKQSQKQQQQQQKKPEDYIQALVALQNEVTDKLSILGLMPM 486
Query: 395 -EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ ++ +K + + +++++++R + K K F+ +D IR +L + G L
Sbjct: 487 SSLAEQLKDKALKRAGMTAEQLQQMIEQRTLARKNKDFAESDRIRTELSALGIALM---- 542
Query: 448 PDNGQRMTRWK 458
T W+
Sbjct: 543 --GEPTGTLWR 551
>gi|152990845|ref|YP_001356567.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
gi|166225301|sp|A6Q401|SYC_NITSB RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|151422706|dbj|BAF70210.1| cysteinyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
Length = 465
Score = 303 bits (777), Expect = 3e-80, Method: Composition-based stats.
Identities = 159/488 (32%), Positives = 249/488 (51%), Gaps = 57/488 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY++ +++ + + +I++YVCGPTVYD AH+G+AR I FD+L R L +
Sbjct: 1 MVIYDSSKKEYCSLEPLKNRHIKVYVCGPTVYDDAHLGHARSAIAFDLLRRTLNALGYKT 60
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
T+++N TDIDDKII++ + S+ ITS Q++++D L +P+
Sbjct: 61 --TFMKNFTDIDDKIIKKMNETGKSL------QEITSYYIQRYLEDMEALGVQRADIEPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT ++ MI +I+ ++ AY+ N +I FDTS Y + S + +++ +R+
Sbjct: 113 ATQNLDAMIDMIERLLQKECAYQTPNGDIYFDTSKDEKYCTLSHK--CDEESMSRIEPNP 170
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGG 237
KKNPADF LWKR + ++SP+G+GRPGWHIECSAM + DIH GG
Sbjct: 171 DKKNPADFALWKRCKGEGDVCFDSPFGKGRPGWHIECSAMIDKHLAYHDTPFQIDIHAGG 230
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENE AQ+ CA E A W+HNGF+ + G KMSKS GN I + L
Sbjct: 231 ADLLFPHHENEAAQTRCACNQE-LAKYWMHNGFVTISGEKMSKSLGNSFFIKDAL----- 284
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------QTSTSKGIID 348
+ + ++R +L THYR ++F + L ++ L K Q ST +
Sbjct: 285 --KVYDGEILRFYLLSTHYRSDLNFNEEDLLASKKRLDKLYRLKKRVYGVQASTPQKEFV 342
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVC 397
+L AL DLN + A+ + + ++ D ++ + +LGI
Sbjct: 343 DELLQALSQDLNISKTLAAIDQFIAYANEHLDNNPKDKAFKKQIVANIEYISKLLGIGHK 402
Query: 398 KE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+++ IE+L+++R K K F AD IR++L S G + D
Sbjct: 403 DAYSYFHLGISEEEKQKIEELIEKRTTAKKEKNFQLADSIREELRSMGIAIMDT------ 456
Query: 452 QRMTRWKQ 459
+ T W++
Sbjct: 457 PQGTLWEK 464
>gi|54302905|ref|YP_132898.1| cysteinyl-tRNA synthetase CysS [Photobacterium profundum SS9]
gi|61216516|sp|Q6LHY2|SYC2_PHOPR RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
Full=Cysteine--tRNA ligase 2; Short=CysRS 2
gi|46916329|emb|CAG23098.1| hypothetical cysteinyl-tRNA synthetase (cysS) [Photobacterium
profundum SS9]
Length = 457
Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats.
Identities = 144/468 (30%), Positives = 213/468 (45%), Gaps = 37/468 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++ +++T+ R++ F +I + + +Y CGPTVYD+AH GN R + DVL R L
Sbjct: 3 QPELLLFDTMARELRPFNSIRANKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLEING 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
E V +V NITD+ +DK+ + AR++ N + I Q F D
Sbjct: 63 YE--VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAQFFEQAFFDDL 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L P+ RAT HI + I IQ + G Y+ ++ + F+T + +YG +R
Sbjct: 115 KLLNISTPSVTCRATEHIQEQIKFIQELETKGFTYQTSDGVYFNTDRLADYGKLARLDKQ 174
Query: 172 EQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV KK+P DF LWK P + W+ PWG G PGWHIECSAM+ YLG
Sbjct: 175 GLEAGIRVEMAE-KKHPTDFALWKFSGDKPRQMEWQGPWGIGFPGWHIECSAMAEKYLGD 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
VFDIH GG D I HH NEIAQ + AN W+H FL L+ K+SKS +
Sbjct: 234 VFDIHVGGEDHIPVHHTNEIAQCQAKNG-HVQANYWLHGYFLQLKKEKISKSGTS----- 287
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------ 343
L + + R L +HYR + FT + L+ A+ L +
Sbjct: 288 --LRLDALVAKGYEPMAYRYLTLTSHYRSHLSFTWEGLSGAQKALHRLRNKVAFLPSNGN 345
Query: 344 -KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+ + DLN A+ + + + ILG+++ K
Sbjct: 346 VDESYRELFMRHINRDLNMPQALALVWDVLNSELLPENKRATALFFDRILGLDIHKIET- 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
I I +LV+ R + + F AD IR Q+ G+ + D +
Sbjct: 405 VEIPEHISRLVELRTQVKRQGNFKKADAIRNQIHDLGYQVNDSGDGST 452
>gi|186471445|ref|YP_001862763.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|184197754|gb|ACC75717.1| cysteinyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 465
Score = 303 bits (776), Expect = 4e-80, Method: Composition-based stats.
Identities = 151/471 (32%), Positives = 218/471 (46%), Gaps = 38/471 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +Y+T R + F +I+ MY CGPTVYD AHIGN R + DVL R L
Sbjct: 1 MPPLMLYDTWSRALRPFVSIEAGRAGMYCCGPTVYDHAHIGNLRTYVFEDVLRRALVRNG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ +V NITD+ +DK+ + +R+ ++ I S+ T FV D
Sbjct: 61 YQL--RHVVNITDVGHLVSDADEGEDKMEKGSRRTG------ESAWTIASRYTDAFVSDW 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L L P+ RAT+HI + I I + G+ Y ++ + FDT +YG +R
Sbjct: 113 RALNLLEPSIWCRATDHIAEQIAFIVELERGGYVYRTDDGLYFDTGKQHSYGYLARLDRA 172
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+ G RV KKN DF LWK S + W+SPWGRG PGWHIECSAMS+ YLG
Sbjct: 173 GLQAGKRVALGA-KKNITDFALWKFSPVDVKRQMEWDSPWGRGFPGWHIECSAMSAKYLG 231
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDIH GG D I HH NEIAQ+ A + AN W+H FL L KMSKSNG
Sbjct: 232 TSFDIHCGGEDHIAVHHSNEIAQTEAAYGT-RLANFWLHGRFLTLSAAKMSKSNG----- 285
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS----- 343
+ + + R R L HYR + FT + L A+ L++
Sbjct: 286 -DFIRLQTLRDRHIDPIAYRYLCLTAHYRSNLHFTWESLYAAQAALNRLRHAYARWRQKN 344
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
+ + DLN +A+ L L + + ++ +LG+ +
Sbjct: 345 ALADARFVARFDAEVNEDLNMPNALAVLWDLVKSDLPDATRRASVDSFDAVLGLGLRDWT 404
Query: 401 -LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
L I I+ L+ ER + ++ +D +R L+ +G+ +ED ++
Sbjct: 405 PLATEIPEDIQALLDERARVRLEGDWAKSDALRTTLQLRGWQVEDGRDGQR 455
>gi|121611834|ref|YP_999641.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
gi|187631646|sp|A1WSL6|SYC_VEREI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|121556474|gb|ABM60623.1| cysteinyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
Length = 460
Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats.
Identities = 156/393 (39%), Positives = 211/393 (53%), Gaps = 31/393 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYNTL R + EF ++P ++RMYVCG T+YD HIG+AR M+ FDV+ R L+
Sbjct: 1 MSLRIYNTLSRALEEFSPLEPGHVRMYVCGMTIYDLCHIGHARMMMAFDVVQRWLKARG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYVRNITDIDDKII RA + + I +T + D L PT +
Sbjct: 60 -LKVTYVRNITDIDDKIIGRALERGIT------IGALTDEMIAAMHADIGALGLEPPTLE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT ++P+M+ LI + G AY +N ++ + YG S + DE + G RV
Sbjct: 113 PRATQYVPRMLALIGQLQAKGLAYRASNGDVNYAVRKFQGYGKLSGKSPDELRAGARVAL 172
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K +P DF+LWK + P EP W+S +GRGRPGWHIECSAMS LG+ FDIHGGG
Sbjct: 173 ADGKTDPLDFVLWKSAKPHEPPEAQWDSDYGRGRPGWHIECSAMSCATLGESFDIHGGGA 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENEIAQS + A W+HNGF+ ++ KMSKS GNF TI ++L
Sbjct: 233 DLQFPHHENEIAQSEGVTG-KPLARFWLHNGFVRVDNEKMSKSLGNFFTIRDVLA----- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGII 347
+ A +R ++ HYR ++++ L +A L +
Sbjct: 287 --QYDAQTVRFFIVRAHYRSALNYSDAHLDDARQALKRLYTALSLVPPAPVAAIDWTEPH 344
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+A+ D T A+ L LA E K+H
Sbjct: 345 AARFQAAMDEDFGTPEAVAVLFDLAVEVNKSHS 377
>gi|57167801|ref|ZP_00366941.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
gi|57020923|gb|EAL57587.1| cysteinyl-tRNA synthetase [Campylobacter coli RM2228]
Length = 460
Score = 303 bits (775), Expect = 5e-80, Method: Composition-based stats.
Identities = 148/489 (30%), Positives = 229/489 (46%), Gaps = 64/489 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ +++ ++ E +D N+ +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MKLMDSVLKEKIE---LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLSLGY-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ + S+ + + + +D L L P +PR
Sbjct: 56 RVQFARNYTDIDDKILKKMSESGKSL------NELVEFYIANYERDMKALNVLEPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I M+ LI + +G Y + + FDTS +Y S S R +E +
Sbjct: 110 ATYYIEPMLDLIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENVSRLSNEVE-- 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E ++S +G+GRPGWH EC AM G DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ CA + A IW+HNGF+ + G KMSKS N + + L + +
Sbjct: 225 HENEAAQCRCACKR-TLAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL-------KDFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L + L K+ + I
Sbjct: 277 EALRFYLLSSHYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
+L L +DLN A+ L + + D + + A I G
Sbjct: 337 AKQILEVLSDDLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGF 396
Query: 397 CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E+L K + I+ + +R K K F+ AD IR+ L G L+D
Sbjct: 397 MDENLYFQWGVAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQDT----- 451
Query: 451 GQRMTRWKQ 459
+ T W++
Sbjct: 452 -PQGTIWEK 459
>gi|289679397|ref|ZP_06500287.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 299
Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats.
Identities = 145/315 (46%), Positives = 195/315 (61%), Gaps = 17/315 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIDAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL F
Sbjct: 173 ESKEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE +
Sbjct: 233 PHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KY 284
Query: 303 PAPVIRLAMLMTHYR 317
V+R ++ +H R
Sbjct: 285 HPEVVRYLLVSSHSR 299
>gi|46446869|ref|YP_008234.1| cysteinyl-tRNA synthetase [Candidatus Protochlamydia amoebophila
UWE25]
gi|61216206|sp|Q6MBU0|SYC_PARUW RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|46400510|emb|CAF23959.1| putative cysteinyl tRNA synthetase [Candidatus Protochlamydia
amoebophila UWE25]
Length = 478
Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats.
Identities = 148/490 (30%), Positives = 245/490 (50%), Gaps = 56/490 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YNT ER+ E + I ++I++Y CGPTVY +AHIGN R I D+L R ++++
Sbjct: 11 LRLYNTAERQKQELKPIKGNHIQLYTCGPTVYHYAHIGNFRTYIFEDLLRRTIQFFGF-- 68
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+T V N+TD+DDK I A + ++ T F +D L + + P
Sbjct: 69 SITQVMNLTDVDDKTIRGAIAKGITL------DEYTKPYKDAFFEDLKTLNIQSAEYYPA 122
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM---GTRVP 180
AT++IP MI +I+ ++ AY+ + I + + P YG S +++ +
Sbjct: 123 ATDYIPAMIEMIKVLLDKKVAYKGGDGSIYYAINQFPRYGCLSHLHLEDLQAGASERVAA 182
Query: 181 EKYHKKNPADFILWKRST---PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++Y K++ ADF+LWK + WESP+G GRPGWH+ECSAM+ H LG+ DIH GG
Sbjct: 183 DEYEKEHVADFVLWKSYDSERDGQIYWESPFGLGRPGWHLECSAMAMHLLGETIDIHVGG 242
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D +FPHHENEIAQS +K N+W+H L ++ +KMSKS GNF T+ +LL
Sbjct: 243 IDNMFPHHENEIAQSEACSG-KKFVNLWMHAEHLVVDQKKMSKSLGNFYTLRDLLN---- 297
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-------- 349
+ + +R +L THY+ ++FT Q + + L + I
Sbjct: 298 --KGFTGIQVRYLLLQTHYKTQLNFTFQGVESVKSSLQRLNDFIQRIYNIQTLQSDGQVD 355
Query: 350 --------AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
AL +DLN SA+ A+ RE + ++ +
Sbjct: 356 LLVNDALIRFAEALADDLNISSALAAIFDFVREINCLCDVNQVSQKEAETVINLMKKFDT 415
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
ILG+ + ++I + +++ +R + K ++ +D +R + +G+++ED
Sbjct: 416 ILGVLTFDKR-EESIPVDLQEAFAKRQQARQEKNWTLSDELRDFIHQRGYLIEDT----- 469
Query: 451 GQRMTRWKQK 460
+ TR K++
Sbjct: 470 -PQGTRLKKQ 478
>gi|282890732|ref|ZP_06299252.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281499325|gb|EFB41624.1| hypothetical protein pah_c026o057 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 489
Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats.
Identities = 156/486 (32%), Positives = 232/486 (47%), Gaps = 51/486 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I+++NT +R + I +Y CGPTVY+FAHIGN R + D+L R L+ +
Sbjct: 18 IQLFNTEKRVKETLV-AEKGQITLYTCGPTVYNFAHIGNFRTYVFEDLLRRTLK--FFGL 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N+TD+DDK I+ A + ++ + T F +D L P
Sbjct: 75 KVKQVMNLTDVDDKTIKGAISKGITL------NAFTQPYKDAFFQDLATLHIEPAEVYPA 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK---MGTRVP 180
AT++I MI +IQ +I G AY+ + I + P YG S K+DE K
Sbjct: 129 ATDYIQPMIEMIQTLIDKGFAYKGQDGSIYYAIRKFPRYGCLSHLKLDELKVGASERVAA 188
Query: 181 EKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++Y K+N +DF+LWK P G W+SP+G GRPGWH+ECSAM+ LG DIH GG
Sbjct: 189 DEYDKENVSDFVLWKNYDPQRDGKIYWDSPFGPGRPGWHLECSAMAMQLLGDTIDIHVGG 248
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+D +FPHHENEIAQS + W+H L ++G+KMSKS GNF T+ +LL
Sbjct: 249 VDNMFPHHENEIAQSEACSG-KTFVKHWMHAEHLIVDGKKMSKSMGNFYTLRDLLA---- 303
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------- 348
+ + +R +L THY+ ++FT + L L + I
Sbjct: 304 --KGFSGVEVRYMLLQTHYKTQLNFTFEGLDAVRHSLRRVQDFIRRVQEIKGSADSGSVA 361
Query: 349 -------PAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAH 390
A AL +DLN A+ AL ++ RE ++L
Sbjct: 362 PVIERTLYAFAKALADDLNISVALAALFEMIREINTLCDKGLVGDSEAAEILEFLQKINQ 421
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+L I E + I ++ +++R I + K +S AD +R + S G+I+ED
Sbjct: 422 VLAIFTF-EVQAEQIPQELQDALEQRNIARQNKNWSEADRLRDLIHSHGYIIEDSVKGAR 480
Query: 451 GQRMTR 456
+++ R
Sbjct: 481 LKKIER 486
>gi|332287758|ref|YP_004422659.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
gi|325506592|gb|ADZ18230.1| cysteinyl-tRNA synthetase [Chlamydophila psittaci 6BC]
Length = 444
Score = 302 bits (774), Expect = 6e-80, Method: Composition-based stats.
Identities = 152/460 (33%), Positives = 225/460 (48%), Gaps = 51/460 (11%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MY CGPTVYD+AHIGN R + D+L R L + V +V NITD+DDK + A
Sbjct: 1 MYTCGPTVYDYAHIGNFRTYVFEDLLKRTL--LFFGYSVKHVMNITDVDDKTLAGA---- 54
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N ++ T+ Q F +D L L PRAT++IPQM+ I+ ++ G AY
Sbjct: 55 --CKKNISLDTYTAPFIQAFFEDVATLNILPADTYPRATHYIPQMLEAIRKLLDDGIAYT 112
Query: 148 ANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP-ADFILWKRST---PMEP 202
+ + F + P+YG S+ ++ + +RV + K +DF+LWK
Sbjct: 113 GQDNSVYFSIKAFPSYGKLSQLQLQNLQCCSRVASDEYDKENLSDFVLWKAYDKKRDGHI 172
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
WESP+G+GRPGWH+ECS M+ LG DIH GG+D IFPHHENEIAQS + +
Sbjct: 173 YWESPFGKGRPGWHLECSIMAMELLGSSIDIHAGGVDNIFPHHENEIAQSESLSH-QPFS 231
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+H+ L ++G+KMSKS GNF T+ LL+ R + IR +L +HYR ++F
Sbjct: 232 RYWLHSEHLLVDGKKMSKSLGNFFTLRNLLD------RGFSGEEIRYMLLQSHYRMQLNF 285
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDP------------------AVLSALYNDLNTVSA 364
T + L L + + P +A+ NDLN +A
Sbjct: 286 TEEGLIACRQALKRLRDFISRLESPYPESATISEDIDRCGQLFLQDFSNAIANDLNIATA 345
Query: 365 IQALHKLARESTKNHDL-----------LPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
+ +L ++ D L I +LG+ L I + +LV
Sbjct: 346 LASLFDFIHQTNSLIDKSNFTQADSNYVLDIMKKIDTVLGVIPFTTSL--EIPSEVAQLV 403
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ER + K K + AD +R Q+ S G+++ED K+ ++
Sbjct: 404 EEREVARKEKNWKQADVLRNQIASLGYVIEDTKSGPKVKK 443
>gi|298710863|emb|CBJ26372.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 535
Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 143/529 (27%), Positives = 229/529 (43%), Gaps = 96/529 (18%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + ++NT R F+ D ++ Y CGPTVYD AHIGN R + +DVL R L Y
Sbjct: 16 ESGLMLFNTEGRTKERFRPQDRRRVKFYSCGPTVYDMAHIGNFRAFLTYDVLKRWLLYQG 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V +V N+TD+DDKII R ++ S+ +T K + F D L + +
Sbjct: 76 FE--VDHVCNLTDVDDKIIARMARDGVSLE------ELTGKYAKLFFDDLESLNIVPASR 127
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM------ 175
PRAT HI ++ ++Q +I AY+ N + F S YG+ + +
Sbjct: 128 YPRATEHIDDIVEMVQGLIDKELAYKVNGSVYFRVSKHGKYGTLACLDTSGMEDGAGEGG 187
Query: 176 --GTRVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ K++ DF LWK P E W++ G+GRPGWHIECSAM+ +LG
Sbjct: 188 GVNDAAEFESEKEDAKDFALWKGYKPEDGEVFWDTLLGKGRPGWHIECSAMARKFLGDTL 247
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
D+H GG+DL+FPHHENE+AQS + W+HN F+N++G KMSKS GNF+T+
Sbjct: 248 DVHAGGIDLVFPHHENEVAQSEGFTG-KPFCRCWVHNAFVNVDGEKMSKSKGNFLTLKST 306
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID--- 348
L T R ++ + YR + F+++ L A+ L + + +
Sbjct: 307 LATAL------DVRAFRYLVVSSQYRTTLGFSMKSLQSAKNTLRRLDKLRVALEAAAAAG 360
Query: 349 -----------------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD----- 380
+ + +DLNT A +L + +
Sbjct: 361 NEEERGDASEVSRELLEVVPKSLEGFDAGMNDDLNTPRAAASLFAVVKAGENALKRVRSA 420
Query: 381 --------------------------LLPIFNASAHILGI--------------EVCKEH 400
LL + + GI + +
Sbjct: 421 NADGGDTAAAGGSPPQSLLPQVDAKYLLAALDRMDSVFGIFYEPAGYEAANTGGDSGGDG 480
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
++ + +L+ RL + K +++AD +R ++++ G+ ++D K D
Sbjct: 481 KEADLPGEMAELLARRLAARENKDWATADAVRDEIKALGYSVKDVKGKD 529
>gi|283782829|ref|YP_003373583.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283441414|gb|ADB13880.1| cysteine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 588
Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 151/541 (27%), Positives = 222/541 (41%), Gaps = 110/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT F + MYVCG TV HIG+ R I FD++ R +
Sbjct: 62 NLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY- 120
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI+++A + ++F K L LAPT +P
Sbjct: 121 -KVTFVRNVTDIDDKIMKKANESG------QNWWERAYIYEREFTKSYNTLGVLAPTVEP 173
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M+ LI+ +I GHAY + FD S +YG + + ++ +
Sbjct: 174 RATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNETC 233
Query: 177 --------------------------TRVPEKYHKKNPADFILWKRSTP---MEPGWESP 207
K +P DF LWK + W++P
Sbjct: 234 ADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKTP 293
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+G GRPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A E AN+W+H
Sbjct: 294 FGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAA-GWES-ANVWMH 351
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
+ ++ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L
Sbjct: 352 SAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQAL 404
Query: 328 TEAEILLSKWPQT------------------STSKGIIDPAVLSALYNDLNTVSAIQALH 369
E++ + S + + A+ +D+N AI +
Sbjct: 405 VESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAEIF 464
Query: 370 KLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN----- 404
R+ D A LG++ + N
Sbjct: 465 TTIRQGNTLIDDCSKDSSQAQSESIQKLIYLAVLQVRAMLDTLGLDPYAKTWASNNNQSP 524
Query: 405 --------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ I ++ R K K F++AD IR L + G ++ D +
Sbjct: 525 AEGSNGKESKEHSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQGSS 584
Query: 451 G 451
Sbjct: 585 W 585
>gi|255037654|ref|YP_003088275.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
gi|254950410|gb|ACT95110.1| cysteinyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
Length = 500
Score = 302 bits (772), Expect = 1e-79, Method: Composition-based stats.
Identities = 149/504 (29%), Positives = 225/504 (44%), Gaps = 67/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +KI+NTL RK F I P + MYVCGPTVY+ H+GN R + FD+L+R L +
Sbjct: 7 QPLKIFNTLTRKKDVFVPIAPPYVGMYVCGPTVYNNVHLGNIRTFLSFDILFRYLTHIGY 66
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD+ +DKI + A+ + I + T F + T
Sbjct: 67 --KVRYVRNITDVGHLVGDGDEGEDKIGKMAKLQKLE------PMEIVQRYTNDFHEVTA 118
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS-----R 167
L+P+ +P AT H+ + I ++ +I G AYE+N + FD + G+ R
Sbjct: 119 VFNLLSPSIEPTATGHLIEQIEAVEALIEKGVAYESNGSVYFDINKYQAGGNEYGKLSGR 178
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
D + + K+NP DF LWK+++P WESPWG+G PGWH+EC+ MS+ Y
Sbjct: 179 IIEDLLNETRDLDGQAEKRNPLDFALWKKASPEHIMQWESPWGKGFPGWHLECTCMSAKY 238
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LGK FDIHGGG+DL FPHHE EIAQ E W+H L + G+KMSKS GN
Sbjct: 239 LGKQFDIHGGGMDLKFPHHECEIAQGKSLTGEEP-VRYWMHTNMLTVNGQKMSKSLGNSF 297
Query: 287 TINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
EL + +++ +R ML + YR +DF+ L A+ K
Sbjct: 298 LPAELFSGNHELLEQAYSPMTVRFFMLQSQYRSTLDFSNDALKAAQKGYKKLANGLRLAK 357
Query: 346 IIDPAV---------------------LSALYNDLNTVSAIQALHKLARESTKNH----- 379
++ +A+ +DLNT A L + + +
Sbjct: 358 MLTYTHEDGVNADDAKKADIEKSIDGFYNAMNDDLNTAVAFANLFNMLKYINMLNTGQLK 417
Query: 380 ----------DLLPIFNASA-HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
L F +LG++ + + +++ + +
Sbjct: 418 SVALGEAVFTSLKEKFVIFFEDVLGLKEELAEGHAILDG----MLKLYREFKLSQNYEKV 473
Query: 429 DYIRKQLESKGFILEDYKNPDNGQ 452
D IR +++G ++ D K +
Sbjct: 474 DEIRSYFKNQGLVIRDTKTRIDWA 497
>gi|19173375|ref|NP_597178.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
gi|74697526|sp|Q8SRE0|SYC_ENCCU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|19170964|emb|CAD26354.1| CYSTEINYL tRNA SYNTHETASE [Encephalitozoon cuniculi GB-M1]
Length = 480
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 151/491 (30%), Positives = 238/491 (48%), Gaps = 58/491 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M K +K+YN++ R I F + ++MY+CGPTVYD +HIG+AR ++FDV+ R+L
Sbjct: 1 MDKTLKLYNSITRTIDIFTPRKGNEVKMYICGPTVYDSSHIGHARTYVMFDVIRRVLSD- 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y + V +V NITDIDDKII RA + S + +T K T++F +D L +P+
Sbjct: 60 YLKYNVRFVMNITDIDDKIIARANETGAS------MEEVTRKYTEEFFEDMKTLNVRSPS 113
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
T+++ +++ I+ + +G AYE+ + FD +S S+ K + +
Sbjct: 114 FVTFVTSYVDKIVKFIEKLEANGLAYESRGSVYFDLNSYQQRYSYPLFKSKDGI-NSEGD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K++P DF+LWKRS EP +ES WG GRPGWHIECS MSS LG+ DIH GG+DL
Sbjct: 173 ENKDKRSPCDFVLWKRSKENEPRYESKWGHGRPGWHIECSVMSSDILGEDLDIHAGGVDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQ E ++H G LN+ G KMSKS NF TI E L +
Sbjct: 233 AFPHHENEIAQCQAYFMQEPWVKCFLHTGHLNISGLKMSKSLKNFTTIKEAL-------K 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------------------- 341
+ +R+ L + + +++ + L AE + K
Sbjct: 286 TISPRQLRVLFLHHQWNKDMNYEKEHLKFAETIEKKIFNFMSVAESMRKNALAFETLENA 345
Query: 342 -----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNA 387
G + AV +AL ++++T + ++ + ++ + +
Sbjct: 346 DREVLRELGNVQEAVHAALLDNVDTPAVMKRIVEMINFTNARIKTISPSTVLVVKDYIKE 405
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLV-----QERLILLK----MKKFSSADYIRKQLESK 438
+LG+ + + I +L+ R + + K D+IR+ ++
Sbjct: 406 ITDVLGLSEEERQESPG-EDLIAQLLSNFRESIREMARRKEPYSKFLEKCDWIRESIKDY 464
Query: 439 GFILEDYKNPD 449
G+I+ED
Sbjct: 465 GYIIEDNSEGS 475
>gi|288930998|ref|YP_003435058.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288893246|gb|ADC64783.1| cysteinyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 467
Score = 301 bits (771), Expect = 1e-79, Method: Composition-based stats.
Identities = 160/488 (32%), Positives = 235/488 (48%), Gaps = 62/488 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIY+T+ +KI E + +RMYVCG T YD++HIG+ R ++ FD L R L +
Sbjct: 1 MKIYDTMSKKIVELKL--DKTVRMYVCGITAYDYSHIGHGRNIVFFDTLRRFLEFKG--H 56
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII RA + + + +F KD L H P+
Sbjct: 57 KVIFVQNFTDVDDKIIRRAIE------LGKTAKEVAEFFISEFWKDAEALNYKKGLH-PK 109
Query: 125 ATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
T++IP++I ++ +I G+AY + ++ F YG S ++E R+
Sbjct: 110 VTDYIPKIIEFVKALIEKGYAYEVESKYGKDVYFHVPRFEKYGELSGYSVEELN-RHRIE 168
Query: 181 EKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+ DF LWK + + ++SPWG+GRPGWHIECS MSS LG FDIHGG
Sbjct: 169 PDERKKDVKDFALWKSAKEEDFKAKSVYDSPWGKGRPGWHIECSVMSSELLGVPFDIHGG 228
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DLIFPHHENE AQS +E W+HN F+ + G KMSKS GN + I + +
Sbjct: 229 GMDLIFPHHENERAQSYALFGVEP-VRYWVHNNFVTINGEKMSKSLGNIVRIRDAV---- 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
+ V+R +L+ HYR P+D++ + L A+ T + +
Sbjct: 284 ---NKYGGEVLRFFLLLAHYRSPLDYSEKALERAKKSYEYLLNTLRNLDMEIAYLKTFGE 340
Query: 347 --------IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASA 389
++AL ND+NT AI +H A E KN
Sbjct: 341 RREGSVKSYMNEFVNALENDMNTPKAIAVMHNFAAEINKNLFEASLEALEKAFEELKTMG 400
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
++ GI + + +L++ER + K + F AD IR++ KG L D K
Sbjct: 401 YVFGIFEKYTRVPVLGEEDV-RLIKERELARKERDFDKADKIREKFREKGIYLVDTK--- 456
Query: 450 NGQRMTRW 457
+ TRW
Sbjct: 457 ---KGTRW 461
>gi|291277354|ref|YP_003517126.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
gi|290964548|emb|CBG40401.1| cysteinyl-tRNA synthetase [Helicobacter mustelae 12198]
Length = 486
Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats.
Identities = 152/481 (31%), Positives = 232/481 (48%), Gaps = 49/481 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY++ ++ I +R+YVCGPTVYD AH+G+AR IVFD+L R L +
Sbjct: 18 SMKIYDSKSKQKVPLVPIKEKEVRIYVCGPTVYDDAHLGHARSSIVFDLLRRTLNLSGYK 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T V+N TDIDDKII + S+ + +T ++ D RL L P P
Sbjct: 78 T--TLVKNFTDIDDKIIHK------SLNHQIPLEEVTQTYIHSYIHDMDRLNVLPPDIHP 129
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT + +I ++ ++ GHAY+ N ++ D P YGS S+R +D++ K
Sbjct: 130 KATQSLGAIISFVERLLHRGHAYQSENGDVYLDVKKDPLYGSLSQRGVDDENQSRIQENK 189
Query: 183 YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGG 236
KK+P DF+LWK + G+ESP+G GRPGWHIECSAM +L DIHGG
Sbjct: 190 E-KKDPRDFVLWKTYKGEDDIGYESPFGFGRPGWHIECSAMIDEHLAYKDEDFCIDIHGG 248
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHENE +Q+ CA E A W+HN +++ G KMSKS GN + + L
Sbjct: 249 GADLLFPHHENEASQTRCAYDSE-LAKYWMHNEMVHINGEKMSKSLGNSFFVKDAL---- 303
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------SKGIID 348
+ ++R +L THYR + F + L ++ L K + +
Sbjct: 304 ---KFHDGEILRNYLLTTHYRAILHFNEEDLLMSKKRLDKIYRLKKRALPVQGVRDKDFE 360
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIE-- 395
+L + +DLN + L + + ++ D ++ +LGI
Sbjct: 361 ARLLHPMQDDLNISQTLSVLDEFLAHANQSLDQNPKDKALHANIISNLAFIEALLGIGGK 420
Query: 396 ----VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ +++ IE+ + ER K K + AD IR++L +G + D
Sbjct: 421 DGKVYFQLGVSEEKVKWIEEKIHERKNAKKEKNYVLADEIRQELHEEGIAIMDTAEGTVW 480
Query: 452 Q 452
+
Sbjct: 481 E 481
>gi|126641281|ref|YP_001084265.1| cysteinyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 447
Score = 301 bits (770), Expect = 2e-79, Method: Composition-based stats.
Identities = 171/478 (35%), Positives = 247/478 (51%), Gaps = 79/478 (16%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD+ HIG+AR M+ FD + R LR V Y+RNITDIDDKII+RA +
Sbjct: 1 MYVCGMTVYDYCHIGHARVMVAFDYIIRFLRSQGW--KVRYIRNITDIDDKIIKRANENG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I +T++ +D L CLAP P+AT +I QM +I N++ G AY
Sbjct: 59 ------ETIQQLTTRFIDAMNEDAANLGCLAPDEAPKATEYIDQMQNMIGNLVNKGAAYP 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+N ++ F+ + YG S RK+++ + RV + KK+P DF+LWK + EP W
Sbjct: 113 ASNGDVYFEVTKFEKYGRLSGRKLEDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
SPWG GRPGWHIECSAMS+ LG FDIHGGG DL+FPHHENEIAQS + E+ N
Sbjct: 173 ASPWGNGRPGWHIECSAMSTCCLGNHFDIHGGGSDLMFPHHENEIAQSEASTG-EQYVNY 231
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+H GF+N++G KMSKS GNF TI +++E + VIR ++ +HYR P++F+
Sbjct: 232 WMHVGFINVDGEKMSKSLGNFFTIRDVME-------KFHPEVIRYFIVSSHYRSPVNFSD 284
Query: 325 QRLTEAEILLSKWPQTST---------SKGIIDPAVLSALYN----DLNTVSAIQALHKL 371
L EA+ L+++ + + +D + + N D NT A+ L +L
Sbjct: 285 VALKEAKTSLTRFYHSFKAYQQVYGQTTTEALDQSFIERFNNAMCDDFNTAEAMAVLFEL 344
Query: 372 ARESTKNHD---------LLPIFNASAHILGI------EVCKEHLNKN----ISIAIEKL 412
+E + L +ILG+ + K + ++ IE
Sbjct: 345 NKELNRAVKEEQADQATVLYSTLRHLTNILGLVQHNVDDFLKSDIGQDALALSDAEIEDF 404
Query: 413 VQER-----------LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+Q+R IR+ L +G +LED + + T W++
Sbjct: 405 IQQRVDAKKAKDFAKAD-----------SIRQSLLEQGVVLEDTR------QGTVWRR 445
>gi|41614851|ref|NP_963349.1| hypothetical protein NEQ055 [Nanoarchaeum equitans Kin4-M]
gi|61216257|sp|Q74MI1|SYC_NANEQ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|40068575|gb|AAR38910.1| NEQ055 [Nanoarchaeum equitans Kin4-M]
Length = 457
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 155/473 (32%), Positives = 228/473 (48%), Gaps = 45/473 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL + F ++ ++MY CG T YD AH+G+ R +V D+L R+LR+
Sbjct: 1 MLYLYNTLTSRKEAFIPLEEPFVKMYTCGVTPYDKAHVGHLRTYLVTDLLRRILRFLGYY 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V N TDIDDKII+++++ +N I +N + L L P
Sbjct: 61 D--IAVTNFTDIDDKIIKKSQE------LNKDWKEIVEENIKYVFDVLKELKVLPFYVYP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T HI + +++++ G+AY+ I FD P YG S K +++
Sbjct: 113 RVTYHIDDIANAVKSLLDRGYAYKGKYSIYFDVDKYPYYGQLSGIK-SKKEWEQEKHLLE 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KKNP DF LWK P EP W + G GRPGWHIECS MSS YLG+ FDIH GG DLIFP
Sbjct: 172 DKKNPYDFALWKFKQPGEPYWNTIVGEGRPGWHIECSVMSSKYLGERFDIHLGGSDLIFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS + W+H G + + G KMSKS GN I E + + +
Sbjct: 232 HHENEIAQSETLYNVHPWVRYWVHIGMVQINGEKMSKSLGNIIEAKEFI-------KKYK 284
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------- 350
+R +L THYR+P+D + + + +A+ + K + I
Sbjct: 285 PEFVRFFLLSTHYRKPLDISEENIEQAQTIYKKLTDAYNTAKSIVENEVSYRFDKDVRII 344
Query: 351 ------VLSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCK 398
++ A +D+NT +AI +L+K+ +N + L F I+ + K
Sbjct: 345 LDYYREMIKAFLDDMNTPTAIASLNKIVSIFNQNPEYPIAYLTLRAFEDFNRIMNVWFEK 404
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
I+ IE +L + K++ AD IR L+ KG ++DYK+
Sbjct: 405 PIDLDIINEIIEIR----NMLRREKQYELADKIRDILQKKGIKIKDYKDKTVW 453
>gi|290958497|ref|YP_003489679.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
gi|260648023|emb|CBG71131.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
Length = 482
Score = 300 bits (769), Expect = 2e-79, Method: Composition-based stats.
Identities = 158/480 (32%), Positives = 224/480 (46%), Gaps = 47/480 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+++ + +Y+TL R T F + S +RMYVCGPTVY HIGN R + D+ R+L +
Sbjct: 10 LRQSLSLYSTLSRTSTHFTPAEDSAVRMYVCGPTVYSAPHIGNMRTYLFADIARRVLGFA 69
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V NITD+ DDK+ + + K T+ F+ D
Sbjct: 70 GY--SVQAAMNITDVGHLTSDADSGDDKM------AKAAAAERATAWEVAEKYTEIFLAD 121
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
RL L RAT HIPQ I LIQ + G Y N+ + FDTS +P+YG +
Sbjct: 122 AGRLNILPMDLVLRATQHIPQQIALIQRLEDKGVVYRTNDGMYFDTSFVPDYGKLTPNDT 181
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTP----MEPGWESPWGRGRPGWHIECSAMSSHY 226
E K++ DF LWK S P + W SPWG G PGWHIECSAM+ Y
Sbjct: 182 REHLRAGERVAMGEKRHATDFALWKFSPPEAPKRDMEWPSPWGVGFPGWHIECSAMAMEY 241
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNF 285
LG+ D+H GG+D I HH NEIAQS A + + W+H FL LE R+M KS GN
Sbjct: 242 LGESLDLHLGGIDHIPVHHTNEIAQSETATGV-PFSRWWMHGAFLTLEGERRMGKSEGNK 300
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------ 339
IT++ L+E + R +L++HYR P+ F+ L +A L +
Sbjct: 301 ITLDTLVE------EGFDPLEFRYLVLLSHYRSPLSFSPTALEQAANALRRLRHRVAAWK 354
Query: 340 ---------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLPIFNASA 389
+ AL DLN A+ L +LAR+ + L + A
Sbjct: 355 KSVGAGAELPDCPDSPYLTRFVEALAEDLNMPRAVAELWQLARDPDVDDATKLSLILAFD 414
Query: 390 HILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+LG+++ I A+ +L QER L K+F +D +R Q+ + G+ ++D
Sbjct: 415 EVLGLDLESASKEPAEIPDAVVRLAQERWELRSAKQFEESDKLRAQILAAGYNVQDGPEG 474
>gi|229094812|ref|ZP_04225817.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|228688555|gb|EEL42428.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 420
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 152/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y E V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N++ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ KE L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419
>gi|305432177|ref|ZP_07401341.1| cysteine--tRNA ligase [Campylobacter coli JV20]
gi|304444720|gb|EFM37369.1| cysteine--tRNA ligase [Campylobacter coli JV20]
Length = 457
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 146/479 (30%), Positives = 222/479 (46%), Gaps = 62/479 (12%)
Query: 15 ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
+ + +D N+ +Y+CGPTVYD AH+G+AR + FD+L R+L V + RN TD
Sbjct: 6 KEKIE-LDQDNVNIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLSLGY--RVQFARNYTD 62
Query: 75 IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
IDDKI+++ + S+ + + + +D L L P +PRAT +I M+
Sbjct: 63 IDDKILKKMSESGKSL------NELVEFYIANYERDMKALNVLEPDFKPRATYYIEPMLD 116
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
LI + +G Y + + FDTS +Y S S R +E + K+N +DF+LW
Sbjct: 117 LIHKLSKNGFTYTLEDGVYFDTSKDEDYLSLSHRNTEENVSRLSNEVE--KRNESDFVLW 174
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K E ++S +G+GRPGWH EC AM G DIH GG+DL+FPHHENE AQ C
Sbjct: 175 KF---DENFYDSEFGKGRPGWHTECVAMIDSIFGDTLDIHAGGVDLLFPHHENEAAQCRC 231
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A + A IW+HNGF+ + G KMSKS N + + L + + +R +L +
Sbjct: 232 ACKR-TLAKIWLHNGFVKINGEKMSKSLNNSFFLKDAL-------KDFMGEALRFYLLSS 283
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------IIDPAVLSALYN 357
HYR ++++ L + L K+ + I +L L +
Sbjct: 284 HYRAHFNYSLDDLENVKKRLDKFYRLKKRLAVGKTPDFGILNDIEIHSNIAKQILEVLSD 343
Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL----- 401
DLN A+ L + + D + + A I G E+L
Sbjct: 344 DLNISKALALLDEFITNANLELDQQSKNKELKQKIKEALSELAKIFGFGFMDENLYFQWG 403
Query: 402 -NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K + I+ + +R K K F+ AD IR+ L G L+D + T W++
Sbjct: 404 VAKELKEKIQDQILQRNEAKKNKDFAKADQIREDLLKLGIALQDT------PQGTIWEK 456
>gi|297619138|ref|YP_003707243.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
gi|297378115|gb|ADI36270.1| cysteinyl-tRNA synthetase [Methanococcus voltae A3]
Length = 559
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 161/553 (29%), Positives = 235/553 (42%), Gaps = 119/553 (21%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK+YN+L + +F+ ++ ++MY+CGPTVYD +H+G+ R + FDV+ R L +
Sbjct: 29 IKVYNSLTNTMEKFRPLEQKAVKMYICGPTVYDSSHLGHGRTYVSFDVIKRYLEHKGY-- 86
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDDKII +A+ + ++ +N F+KD L P+
Sbjct: 87 NVYLVINFTDIDDKIINKAK------NLKVDCKNVSEENIASFLKDMLSLGVEPANVYPK 140
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE------------ 172
T I ++I I ++ +AY A + + F+ YG S +D+
Sbjct: 141 VTQSISEIIDFIGVLVEKDYAYIAKDGVYFNVRKFRQYGRLSNINLDKLKPKSKEAQNNN 200
Query: 173 ---QKMGTRVPEKYHKKNPADFILWKRSTP-------MEPGWESPWGRGRPGWHIECSAM 222
+ +K K N DF LWK + P +EP W SPWG+GRPGWHIECS M
Sbjct: 201 ENNNENNNENKDKNGKLNVEDFALWKFNEPVFDGDTCIEPAWNSPWGKGRPGWHIECSVM 260
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
S+ Y G+ FDIHGGG DL FPHHENEIAQS W+H GF+ + G KMSKS
Sbjct: 261 SAKYFGECFDIHGGGKDLAFPHHENEIAQSDSYF-EAPCVKYWMHTGFVRVNGEKMSKSL 319
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-- 340
GNF+TI ++L + + +RL + HYR P+D++ + L+ + L+K+
Sbjct: 320 GNFVTIEDML-------KKYDKDTLRLFFIQRHYRSPLDYSDESLSHVKNTLNKFENAIK 372
Query: 341 ----------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
A+ +D NTV A++ L+ L + K
Sbjct: 373 KLIYYSKNSEVKNKLTVNDVEFMNILYTCRNKYYDAMDDDFNTVEAVRVLNSLVGATNKY 432
Query: 379 H-----------------DLLPIFNASAHILGI-------------------EVCKEHL- 401
L + + GI E KE
Sbjct: 433 MAELDNLENSNANTAIIIQALEFYRDVGEVFGIFGDLKIDCYLNCLKRYGYQEEVKESAV 492
Query: 402 --------------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I + +++ R L K + AD IR LE +LED
Sbjct: 493 CMDKILNTEIGFADGVKIDGLMNLILELREELRDNKNYEMADKIRDNLEKLDILLEDN-- 550
Query: 448 PDNGQRMTRWKQK 460
+ TRW K
Sbjct: 551 ----PKGTRWIYK 559
>gi|229182484|ref|ZP_04309735.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|228600939|gb|EEK58508.1| Cysteinyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 420
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTGNMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|169350895|ref|ZP_02867833.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
gi|169292481|gb|EDS74614.1| hypothetical protein CLOSPI_01669 [Clostridium spiroforme DSM 1552]
Length = 460
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 150/466 (32%), Positives = 221/466 (47%), Gaps = 50/466 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL K EF+ + + +YVCGPTVY++ HIGN RPMIVFDVL R Y
Sbjct: 16 MRLFNTLTNKKEEFKPLRDGEVSIYVCGPTVYNYVHIGNTRPMIVFDVLRRTFEYLGY-- 73
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N TD+DDKII+ A+QE S +T K + + L L PT+ PR
Sbjct: 74 KVIFVSNFTDVDDKIIKAAKQEGISE------KELTDKYIKAYEDVRRDLNLLFPTYAPR 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
TN + +I I +++ G+AYE + ++ F S I YG S KI++ G +
Sbjct: 128 VTNTMEAIISFIDDLVKTGYAYEVDGDVYFRVSKIEEYGQLSGIKIEDLVAGASERVDEN 187
Query: 185 KKNPA--DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLI 241
K DF LWK+ T ++SPW +GRPGWH EC M + DIHGGG DL
Sbjct: 188 NKKEESTDFALWKK-TDEGIRFDSPWSKGRPGWHTECVVMINDIFQDGKIDIHGGGQDLK 246
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A+ W+HN +N++ +KMSKS GN I +++
Sbjct: 247 FPHHENEIAQSMACHH-HPIAHTWMHNQMINIDNQKMSKSLGNVIWAKDMINDL------ 299
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------------STSKGI 346
V + ML +HYR P++ T L + ++K +
Sbjct: 300 -GCNVYKWFMLSSHYRNPLNLTDAVLNNVKKEVAKVDNVVKTVSLYLQVNGLDGNEYCKE 358
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----------IFNASAHILGIE 395
++ AL +DLNT A+ + + + + ++G
Sbjct: 359 TVDVMVDALEDDLNTSLALTQILNQVKVLNQLMRVKEKDDESILMNYNTLMKMVTVIGFV 418
Query: 396 VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
L+ + +L ++ L ++K F AD +R +L SKG I
Sbjct: 419 YQPHQLS--LDEL--ELYKKWLEAKEVKNFDVADKLRSELISKGII 460
>gi|229153868|ref|ZP_04281998.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629549|gb|EEK86246.1| Cysteinyl-tRNA synthetase [Bacillus cereus ATCC 4342]
Length = 420
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTNHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|229027937|ref|ZP_04184090.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228733325|gb|EEL84154.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 420
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 219/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGNGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTELTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|32490992|ref|NP_871246.1| hypothetical protein WGLp243 [Wigglesworthia glossinidia
endosymbiont of Glossina brevipalpis]
gi|30173143|sp|Q8D2V9|SYC_WIGBR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|25166198|dbj|BAC24389.1| cysS [Wigglesworthia glossinidia endosymbiont of Glossina
brevipalpis]
Length = 463
Score = 300 bits (768), Expect = 3e-79, Method: Composition-based stats.
Identities = 155/482 (32%), Positives = 249/482 (51%), Gaps = 56/482 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL+ K +F+ I+ + + +YVCG T YD HIG+AR ++ FD++ + +Y
Sbjct: 1 MMKIFNTLKNKKEKFKPINSNIVNVYVCGITPYDLCHIGHARTLVFFDIMIKYFQYKGYR 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
Y+RNITDIDDKII +A + ++++ ++ D L + P ++P
Sbjct: 61 T--NYIRNITDIDDKIINKA------FHKKEKYNLLSDFMIKEMKYDLNSLNIMPPNNEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK--MGTRVP 180
R TNHI ++ +I+ ++ HAY +++FD S+ +YG S+R ++++ +
Sbjct: 113 RVTNHISDILEMIKILLEKKHAYISKTGDVVFDISTYRDYGKLSKRFEEKKQLLNNKKNK 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K DF+LWK S P EP W+SPWG GRPGWHIECSA+S LG +FDIHGGG DL
Sbjct: 173 INFKTKKEKDFVLWKMSKPNEPSWKSPWGHGRPGWHIECSAISDKTLGNIFDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHENEIAQS CA+ + N W+H G + + KMSKS GN I E++ +
Sbjct: 233 IFPHHENEIAQSKCAN-SKFNVNFWVHTGMVMFKKEKMSKSLGNSCLIREIV-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDPAV 351
+ A ++ + +HYR I ++V + +++ + + ++ + K
Sbjct: 285 KYDADTLKYFLTSSHYRSQITYSVDNMEKSKSAVKRLYRSLHNTNYFYNLPIKEKFTSKF 344
Query: 352 LSALYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHLNK 403
+ A+ +D NT A L ++R+ K + L + ++I+GI LN+
Sbjct: 345 IDAMNDDFNTPKAYSVLFSISRQINYFKNKNPEKANQLSTVLKNLSNIIGI------LNE 398
Query: 404 NISIAIEKLVQE--------------RLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
N + ++ R K+K++ AD RK+L+ G LED
Sbjct: 399 NPDSYLNNKLKFSKDKINKIKSIIKKRENYRKLKQWEKADEERKKLKYIGVCLEDTIQGT 458
Query: 450 NG 451
Sbjct: 459 KW 460
>gi|228925343|ref|ZP_04088439.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931592|ref|ZP_04094498.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228983345|ref|ZP_04143558.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229089221|ref|ZP_04220502.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228694060|gb|EEL47742.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228776335|gb|EEM24688.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228828020|gb|EEM73748.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834265|gb|EEM79806.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 420
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|256824257|ref|YP_003148217.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
gi|256687650|gb|ACV05452.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
Length = 500
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 148/501 (29%), Positives = 227/501 (45%), Gaps = 70/501 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++ R++ +F P +Y+CG T HIG+ R + FDVL R +
Sbjct: 1 MTLRLHDSATREVRDFVPRVPGRASIYICGLTTQTSPHIGHLRFAVAFDVLRRWME-RGH 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ ++ + + A + + + ++ + P+++
Sbjct: 60 GLEVTLVRNVTDIDDKILAKSAE------HSVAWNEWSQRYERETSAALETIGVRPPSYE 113
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
PRAT H+P MI L++ +I GHAY A+ ++ FD S P YG +R+ ID+ T
Sbjct: 114 PRATGHVPDMIELMERLIERGHAYPADDGSGDVYFDVRSWPAYGELTRQSIDDMTPATDA 173
Query: 180 PEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
+ K++P DF LWK + EP W +PWGRGRPGWH+ECSAM+ +LG+ FDIHGG
Sbjct: 174 DPR-GKRDPRDFALWKGAKADEPHTATWPTPWGRGRPGWHLECSAMAWRWLGEEFDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHENE AQS A N W+HNG L G KMSKS GN +T+ EL
Sbjct: 233 GNDLRFPHHENEQAQSRAAGFG--FTNFWLHNGMLTTGGEKMSKSIGNTLTVQELT---- 286
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----------------Q 339
+ + +R + HYR +++T L EA + + +
Sbjct: 287 ---KIYRPLAVRWLLATVHYRSALEYTPTSLDEATAQVERVEGFLRRALEAAATTPDALR 343
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASA 389
+ + PA A+ +D+N +A+ + + R
Sbjct: 344 AEAADVALPPAFSEAMDDDVNVSAALAVVFEHVRRGNAALASGADHEGVRQTAVAVAGML 403
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLK---------------MKKFSSADYIRKQ 434
+LG++ + L L K F++AD IR
Sbjct: 404 DVLGLDPLAPQWDGGAEGDAAAL-----QALDGLVSERLAARAAAKKEKDFATADAIRDA 458
Query: 435 LESKGFILEDYKNPDNGQRMT 455
L + G + D + T
Sbjct: 459 LAALGITVADGPAGVTWELAT 479
>gi|229119752|ref|ZP_04249013.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228663653|gb|EEL19232.1| Cysteinyl-tRNA synthetase [Bacillus cereus 95/8201]
Length = 420
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + ++
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYSNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLADLEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|319956986|ref|YP_004168249.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
gi|319419390|gb|ADV46500.1| cysteinyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
Length = 470
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 141/485 (29%), Positives = 225/485 (46%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++I++++++ F+ I P +YVCGPTVYD AH+G+AR + FD+L R LR
Sbjct: 1 MQMQIFDSVKKAKVPFEPIRPGEASIYVCGPTVYDEAHLGHARSALSFDLLSRTLRSLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT +N T + ++ +T Q+++++ L +
Sbjct: 61 --KVTLAKNFT------DIDDKIIKKINETGQSLQELTDYYIQRYLEEMAALGVRRADIE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP- 180
P+AT + + +++ +I G AY ++ FDT +YG S DE++ +R+
Sbjct: 113 PKATESLDAIQAMVEGLIEKGCAYRTESGDVYFDTCKDEHYGEISHMLGDEEEARSRLCE 172
Query: 181 -EKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGK----VFDIH 234
+ K++P DF LWK + + +++ G GRPGWHIECSAM + DIH
Sbjct: 173 IKTGEKRHPRDFALWKACSGEGDVCFDTELGSGRPGWHIECSAMIEKHFQGNGEYTIDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL+FPHHENE AQ+ CA E A W+HNGF+ ++G KMSKS GN + + L
Sbjct: 233 GGGADLLFPHHENEAAQTRCATGHE-IAKYWMHNGFVQIDGEKMSKSLGNSFFLKDALAI 291
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KG 345
+P ++R ++ HYR +F L A+ L K + +
Sbjct: 292 -------YPGELLRFYLIGVHYRNDFNFNEVDLQAAKKRLDKLYRLKKRLTPGKVGEAEA 344
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI 394
A+ A+ +DLNT A+ + ++ + + D LL +LG
Sbjct: 345 GFVQALKEAMADDLNTSKALAIVDEMVSAANEALDANPRDKVLKRTLLGNIAFIDELLGF 404
Query: 395 EVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ ++ IE + ER K K FS AD IR +L+ KG L D
Sbjct: 405 GGSDPYAWFQHGVSEEERQEIEAKIAERDAAKKAKDFSKADTIRDELKEKGIALMDTPEG 464
Query: 449 DNGQR 453
++
Sbjct: 465 TKWEK 469
>gi|325106932|ref|YP_004268000.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
gi|324967200|gb|ADY57978.1| cysteinyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
Length = 505
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 164/508 (32%), Positives = 236/508 (46%), Gaps = 63/508 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+ YNTL ++ EFQ ++P +RMY CGPTVYDFAHIGN R + D++ R L
Sbjct: 1 MAIQFYNTLNNRLEEFQPLEPGTVRMYSCGPTVYDFAHIGNFRSFLFADLIRRFLEVMGN 60
Query: 63 EKCVTYVRNITDI-------------DDKIIERARQEHPSIPIN----------DAISII 99
E V +V NITD+ +DK+ A++ D +
Sbjct: 61 E--VIHVMNITDVGHMTDDHLADGGGEDKMEAAAKRLKEDKKSGKVPEGAIENPDDPYQV 118
Query: 100 TSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIF 154
TQ F++D +L P AT HIP+M +I+ +I HAY + + +
Sbjct: 119 AEYFTQAFLEDARKLGMKIAFEYPERIPHATKHIPEMQQMIEQLIAKDHAYVGPDGAVYY 178
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKY----HKKNPADFILWKRSTPMEPGWESPWGR 210
S P YGS S +D+ + G+ + +K++PADF+LWK W+SPWG+
Sbjct: 179 SVESFPEYGSLSGNTLDQLREGSGGRVQEADQVNKRHPADFLLWKPDQSHVMKWDSPWGK 238
Query: 211 GRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
G PGWHIECS M+ LG DIH GG DLIFPHHE EIAQS A A W+H
Sbjct: 239 GYPGWHIECSVMARLLLGRDTIDIHTGGEDLIFPHHECEIAQSRGASGEGSFARFWMHAR 298
Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
FL +EG KMSKS GNF T+ ++L K GR V+R +L +HYR ++FT + L +
Sbjct: 299 FLMVEGEKMSKSKGNFYTVRDVLSG-KVTGRDVHPAVLRYELLKSHYRSNMNFTEKGLKD 357
Query: 330 AEILLSKWPQTSTSK--------GIIDPAV------LSALYNDLNTVSAIQALHKLARES 375
+ + K + + ID + L+AL +DLN A+ L +
Sbjct: 358 SAGAVRKLNEFNQQLQAKTGGKVAEIDNSHPVLAEFLAALSDDLNIAGALGVLFPWMHNN 417
Query: 376 TKN-HDLLPIFNASAHILGIEVCKEHLNKNISIA------IEKL---VQERLILLKMKKF 425
+ L + IL + + + A IE L + E K +
Sbjct: 418 NDAPEEALAVLQTINRILDVAPMEHEQAEESGGAAEGGLDIEALCRGIDE---ARASKDW 474
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQR 453
AD +R QL+ G+ + + +
Sbjct: 475 GKADELRNQLQDAGYEVRNSPEGTVATK 502
>gi|300708706|ref|XP_002996527.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
gi|239605836|gb|EEQ82856.1| hypothetical protein NCER_100366 [Nosema ceranae BRL01]
Length = 467
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 152/482 (31%), Positives = 230/482 (47%), Gaps = 62/482 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L +K+ F IDP+N+++Y+CGPTVYD +HIG+AR + FDV+ +L Y
Sbjct: 1 MLKIYNSLTKKLEIFNPIDPNNVKIYICGPTVYDHSHIGHARTYVSFDVIRNILE-KYFN 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+V NITDIDDKII ++++ S + IT K T F++D L PT
Sbjct: 60 YNVTFVMNITDIDDKIINKSKETGMS------MKDITVKYTNLFLEDMALLNVRKPTVLT 113
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T ++ ++ ++ + +G+AYE+N + FD + + + P
Sbjct: 114 KVTEYVDKIKEYVKILENNGYAYESNGSVYFDVMEYKKKFKYPIFREETVNNLGDSPNIQ 173
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+P DF LWK+ +G GRPGWHIECS M++ LG DIH GG+DL FP
Sbjct: 174 DKKSPLDFALWKKDN--------LFGSGRPGWHIECSVMANDVLGDYIDIHAGGVDLKFP 225
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ + + N ++H G LN+ G KMSKS NF TI +LE
Sbjct: 226 HHENEIAQCQARYQKKPWVNYFMHTGHLNINGLKMSKSLKNFTTIKSILERCT------- 278
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND----- 358
+R+ L + + +++ +++ A+ + K I+ ND
Sbjct: 279 PIQLRILFLYHQWNKDMNYEEEQIKFAQNVEKKIFNFFMYVNSINNISKIYNKNDIEVLD 338
Query: 359 ----------------LNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILG 393
+T S I+AL +L + DL ILG
Sbjct: 339 LISKTSKIVDVSFSNNFDTPSVIKALLELVSFTNSKLDLVSACTLYQVRDFVKRILDILG 398
Query: 394 IEVCKEHLNKNISIAIEKLV-----QERLILLK---MKK-FSSADYIRKQLESKGFILED 444
I +E + S + KL+ + R+ L K K ++ D +R L+ G++LED
Sbjct: 399 IN-KEEKVRDEDSENLAKLINIFRNKIRMALKKGVNKKDLYNICDEVRDNLKDLGYVLED 457
Query: 445 YK 446
K
Sbjct: 458 SK 459
>gi|296282436|ref|ZP_06860434.1| cysteinyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
Length = 483
Score = 300 bits (767), Expect = 4e-79, Method: Composition-based stats.
Identities = 144/493 (29%), Positives = 217/493 (44%), Gaps = 53/493 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K++N+L R++ F + R+Y CGPTVY++ HIGN R + DVL R L +
Sbjct: 5 PQLKLFNSLNRQLEPFVPVHEGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWRGY 64
Query: 63 EKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+T++ NITD+ DD + E + +I I TQ F D L
Sbjct: 65 --KLTHIINITDVGHLTDDADAGEDKLEKMAAKQKQSIWDIAEHYTQAFKADVAALNIRE 122
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
P AT++I QMI + I H Y+ + + FD S++ +YG +R +E + R
Sbjct: 123 PAEWSVATDYIEQMIDFAKQIEAK-HCYQLESGLYFDVSTVEDYGRLARAVTEEGE--GR 179
Query: 179 VPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K+N ADF +W+ + E W+SPWGRG PGWH+ECS M LG FDIH
Sbjct: 180 IDTVEGKRNAADFAIWRTTPEGETRQMEWDSPWGRGAPGWHLECSVMGGKLLGFPFDIHT 239
Query: 236 GGLDLIFPHHENEIAQSCCADRI-------EKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
GG+D HH NEIAQ+ A IW+HN FL KMSKS+G F+ +
Sbjct: 240 GGIDHREIHHPNEIAQNQAYCGCGGLDDAAHSGAKIWMHNNFLVERSGKMSKSSGEFLRL 299
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
L++ + + R+ L HYR ++F+ + L A L + ++
Sbjct: 300 QLLID------KGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKRMVMAVQPLREVE 353
Query: 349 -------------PAVLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILGI 394
A+ +DLNT A+ AL LA + + +LG+
Sbjct: 354 SAATDHPKFAPALAKFQDAMADDLNTAIALTALEDALATKKVDAGIKRAVVERMDAVLGL 413
Query: 395 EVCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
+ IE ++ R K F+++D IR +L +KG + D
Sbjct: 414 GLLDLARTDLRLRPKDAIITEAEIEDALERRKAARAEKDFATSDAIRDELAAKGVEVMD- 472
Query: 446 KNPDNGQRMTRWK 458
WK
Sbjct: 473 ----GDPLGWEWK 481
>gi|260891413|ref|ZP_05902676.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
gi|260858796|gb|EEX73296.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
Length = 355
Score = 299 bits (765), Expect = 7e-79, Method: Composition-based stats.
Identities = 153/371 (41%), Positives = 225/371 (60%), Gaps = 16/371 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YNT+ KI EF+ I+ + ++MYVCGPTVY++ H+GNARP++VFD L R +
Sbjct: 1 MKLYNTMTNKIEEFKTIEENKVKMYVCGPTVYNYIHLGNARPIVVFDTLARYFEHKG--M 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TD+DDKII ++ +E S S ++ K + F +D ++L L +P+
Sbjct: 59 KVEFVQNFTDVDDKIINKSMEEGTSA------SEVSEKYIKYFFEDISKLNILESVKRPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T ++ ++I +IQ +I +G AYE + ++ F+ +YG S +KI+E ++G R+
Sbjct: 113 VTENMAEIIEIIQKLIDNGFAYEKDGDVYFEVKKYKDYGKLSNQKIEELELGARIDVSEI 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKNP DF LWK+ EP WESPWG+GRPGWHIECSAM+ YLG FDIHGGG DL+FPH
Sbjct: 173 KKNPVDFALWKKKKDGEPFWESPWGQGRPGWHIECSAMAKKYLGDTFDIHGGGQDLVFPH 232
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA AN W+HNGF+ + G KMSKS GNF + E+LE +
Sbjct: 233 HENEIAQSKCAYH-GNFANYWLHNGFIQINGDKMSKSLGNFFLLREILE-------KFSG 284
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA 364
V+RL +L THYR+PI+F+ + + + + L ++ I + +
Sbjct: 285 NVVRLFILSTHYRKPINFSFENIEDTKKALQNIVKSMNKFEDIVEKYKNEKIESVKNSEF 344
Query: 365 IQALHKLARES 375
Q + + ++
Sbjct: 345 SQKIEEFDKKI 355
>gi|58697305|ref|ZP_00372667.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536329|gb|EAL59815.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
Length = 415
Score = 299 bits (765), Expect = 8e-79, Method: Composition-based stats.
Identities = 181/429 (42%), Positives = 249/429 (58%), Gaps = 36/429 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG VTYVRNITDIDDKII A ++
Sbjct: 1 MYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYG--KVTYVRNITDIDDKIINAASEK- 57
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N I IT+ + F D + C PT++P+AT ++ +I LI++++ GHAYE
Sbjct: 58 -----NSNIESITTYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYE 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
++ + F+ S YG+ S +K DE G+RV +KK+P DF+LWK + ++
Sbjct: 113 SDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSY 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL FPHHENEIAQS A A
Sbjct: 173 WNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAK 232
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNGFL + KMSKS N + + +LL++ VIR A+L THYR+P+D+T
Sbjct: 233 YWMHNGFLTVNEEKMSKSLFNIVKVRDLLDS------GIKGEVIRYALLKTHYRKPLDWT 286
Query: 324 VQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARE 374
+++A+ L+K+ + S I + AL NDLN A+ LH++A +
Sbjct: 287 ENVISDAQETLNKFYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAK 346
Query: 375 STK------NHDLLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKF 425
K L F SA +G+ + IE+L+ R + K +
Sbjct: 347 INKMSNESEKLKLTESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDY 406
Query: 426 SSADYIRKQ 434
++AD IR Q
Sbjct: 407 NTADKIRDQ 415
>gi|298253308|ref|ZP_06977100.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532703|gb|EFH71589.1| cysteinyl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 588
Score = 298 bits (764), Expect = 8e-79, Method: Composition-based stats.
Identities = 151/541 (27%), Positives = 222/541 (41%), Gaps = 110/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT F + MYVCG TV HIG+ R I FD++ R +
Sbjct: 62 NLHLYNTASHSTNTFVPKKHGQVGMYVCGATVQSSPHIGHIRAAIAFDIIRRWMLRLGY- 120
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRN+TDIDDKI+++A + ++F K L LAPT +P
Sbjct: 121 -KVTFVRNVTDIDDKIMKKANESG------QNWWERAYIYEREFTKSYNTLGVLAPTVEP 173
Query: 124 RATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
RAT HI M+ LI+ +I GHAY + FD S +YG + + ++ +
Sbjct: 174 RATGHITDMVELIERLIERGHAYVIKDNDGNPTGNVYFDVPSWEHYGELTHQNQNQNETC 233
Query: 177 --------------------------TRVPEKYHKKNPADFILWKRSTP---MEPGWESP 207
K +P DF LWK + W++P
Sbjct: 234 ADEAAAIADAKGPSVDAAENDIYNPTDPADASPDKHDPRDFALWKAPCDFDQPDARWKTP 293
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+G GRPGWHIECSAMS YLG FDIHGGGLDL FPHHENE+AQ+ A E AN+W+H
Sbjct: 294 FGEGRPGWHIECSAMSHRYLGNDFDIHGGGLDLRFPHHENEMAQTRAA-GWES-ANVWMH 351
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
+ ++ +G KMSKS GN +++ +L A V+R A+ YR ++++ Q L
Sbjct: 352 SAWVTAKGEKMSKSLGNGLSVPVVLANN-------SAWVVRYALGAVQYRAMLEWSDQAL 404
Query: 328 TEAEILLSKWPQT------------------STSKGIIDPAVLSALYNDLNTVSAIQALH 369
E++ + S + + A+ +D+N AI +
Sbjct: 405 VESKSAYDRIMNFLERADRLLDKKPTCEEVRSVNADELPEDFTRAMNDDINVSGAIAEIF 464
Query: 370 KLARESTKNHDLLP--------------------IFNASAHILGIEVCKEHLNKN----- 404
R+ D A LG++ + N
Sbjct: 465 TTIRQGNTLIDDCSKDSSQAQSESVQKLIYLAVLQVRAMLDTLGLDPYAQTWASNDNQSP 524
Query: 405 --------------ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ I ++ R K K F++AD IR L + G ++ D +
Sbjct: 525 AEGSNGKENKEHSALDSLITLQLKARADARKAKDFATADAIRDALNNAGIVIVDTSQESS 584
Query: 451 G 451
Sbjct: 585 W 585
>gi|301630357|ref|XP_002944288.1| PREDICTED: cysteinyl-tRNA synthetase-like [Xenopus (Silurana)
tropicalis]
Length = 433
Score = 298 bits (764), Expect = 9e-79, Method: Composition-based stats.
Identities = 162/462 (35%), Positives = 229/462 (49%), Gaps = 63/462 (13%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD H+G+AR M+ FDV+ R LR VT+VRNITDIDDKII RA +
Sbjct: 1 MYVCGMTVYDLCHVGHARSMVAFDVVQRWLRASG--LAVTFVRNITDIDDKIIRRAVESG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I +T + + +D L PTH PRAT+++PQM+ +++ + G AY
Sbjct: 59 ------ETIGALTRRMIDEMYRDADALGVERPTHDPRATDYVPQMLDIVRRLEDQGLAYR 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---G 203
+ ++ F P YG S + +DE + G RV + K++P DF+LWK + EP
Sbjct: 113 APSGDVNFAVRKFPGYGKLSGKTLDELQAGERVAVQDGKQDPLDFVLWKAAKANEPQEAK 172
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W+S +G+GRPGWHIECSAM LG+ FDIHGGG DL FPHHENEIAQS A+ + A
Sbjct: 173 WDSGYGQGRPGWHIECSAMCGALLGQTFDIHGGGADLQFPHHENEIAQSEGANG-QPLAR 231
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNGF+N++ KMSKS GNF TI ++L + A IR ++ +HYR P++++
Sbjct: 232 FWMHNGFINIDNEKMSKSLGNFFTIRDVLG-------QFDAETIRFFVVRSHYRSPLNYS 284
Query: 324 VQRLTEAEILLSKWPQT----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
L +A L + +A+ D T A+ L LA
Sbjct: 285 DAHLQDARGGLKRLYTALSVVAPAEVPIDWADPYAARFKAAMDEDFGTPEAVAVLFDLAG 344
Query: 374 EST--KNHDLLPIFNASAH-----------IL----GIEVCKEHLNKNISIAIEKLVQER 416
E ++ L A L G++ A +
Sbjct: 345 EVNRRRSATLAGQLKALGGCLGLLQGDAQTFLQAGTGLDASAIAAQIAARAAAKGAR--- 401
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
F+ AD IR +L ++G +L+D T W+
Sbjct: 402 -------NFAEADRIRAELLAQGIVLKDS------PAGTTWE 430
>gi|229113766|ref|ZP_04243201.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228669637|gb|EEL25044.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-3]
Length = 420
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 152/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y E V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYE--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N++ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ KE L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419
>gi|302344681|ref|YP_003809210.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
gi|301641294|gb|ADK86616.1| cysteine synthase [Desulfarculus baarsii DSM 2075]
Length = 775
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 138/484 (28%), Positives = 221/484 (45%), Gaps = 53/484 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K +NTL R+I E + + P + +Y CGP++ +G R MI D+L R L E
Sbjct: 309 LKFFNTLTRRIDELRPVRPGRVGIYACGPSLDGPPDLGLCRRMIFADLLRRYLELRGFE- 367
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V NI DIDD+ + + E + T++ + F +D L L + P+
Sbjct: 368 -VKLVVNIADIDDRTVNQCLAEGAEL------KEFTARWEKAFHEDMAALNVLPASDYPK 420
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
A+ HIP+MI + ++ AYE + F+ S PNYG S ++ + G V Y+
Sbjct: 421 ASEHIPEMIEETRKLLAKDLAYEKLRSVYFNISRYPNYGQLSHVDLNAIQKGKTVDFDYY 480
Query: 185 K-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ +NP+DF L+KR++ E W +PWG RPGWH+EC+ MS+ +LG+ FDIH D
Sbjct: 481 EKENPSDFTLFKRASLQELKAGVYWPTPWGNCRPGWHVECACMSAGHLGQPFDIHLASSD 540
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPH +NEIA + + AN+W+H+ + ++G+K ++ GN +++ ELLE
Sbjct: 541 LIFPHGDNEIAIAESLYG-KPLANLWLHSEVVVVDGKKANRVQGNDVSLRELLE------ 593
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------STSKGII 347
+ +R ML HYR + F ++L AE + + +
Sbjct: 594 QGHSPQAVRYWMLSQHYRRALRFAPEQLDLAERTVRRLNDFVARLRFLTPAPDDAQAEDV 653
Query: 348 DPAVLSA-------LYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
D + + NDL A + + + +L
Sbjct: 654 DQLIYETRYRFQEAMDNDLGVAKAQGHIFAFIKAINRLAAGEGLTMAQIQKVLEFMQRLD 713
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ + AIE+LVQ+R F+ AD +R+QL G + D +
Sbjct: 714 SVLGVMNFD---GSSWDPAIEELVQKREQARADGDFALADRLREQLAEMGVQVADTPSGA 770
Query: 450 NGQR 453
R
Sbjct: 771 RWHR 774
>gi|229015492|ref|ZP_04172490.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021701|ref|ZP_04178283.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228739569|gb|EEL89983.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745779|gb|EEL95783.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH1273]
Length = 420
Score = 298 bits (764), Expect = 1e-78, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N++ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLAEMEKFQVAFEEAMDDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIGAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|290558858|gb|EFD92250.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 467
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 157/479 (32%), Positives = 235/479 (49%), Gaps = 56/479 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++NTL +K +F ID + MY CGPTVY++ HIGN R I +D+L R
Sbjct: 1 MELFNTLSKKKEKFNPIDGKTVSMYTCGPTVYNYVHIGNLRTFIFYDILKRAFELEGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N+TD+DDK I+ +++ S+ T+ T F++D RL P+
Sbjct: 59 TVQHVMNLTDVDDKTIKGSQETGTSLE------DYTTVYTNYFMEDLKRLNIKDNIKFPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I +M +I ++ G+AYEA++ I +D S +YG S ++ + + + Y
Sbjct: 113 ATENIDEMQSIINELLKKGYAYEADDGIYYDVSKFNDYGKLSGMTVNGKYSRIK-NDDYD 171
Query: 185 KKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N ADF LWK T + WE +GRPGWHIECSAMS YLGK D+H G +DLIF
Sbjct: 172 KENAADFALWKYWTENDGKVYWEGKLKKGRPGWHIECSAMSLKYLGKTIDVHCGAVDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS +K N W+H L + G+KMSKS GNF T+N+L++ + +
Sbjct: 232 PHHENEIAQSEAYTG-QKFVNYWVHAEHLLVNGQKMSKSLGNFYTLNDLVQ------QGF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
RL +L +HYR +DFT L E ++ Q
Sbjct: 285 NPLSFRLMVLDSHYRNRLDFTFDSLKKYEKLLKKIDLSIKSLEKTEKYEGNNNNARVQQI 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA 389
+ +A+ NDL+T SA+ A L + L +
Sbjct: 345 QDQVNKLLENFKAAVNNDLDTHSALVAFFSLLDLCDSTAEKGSIDNLEYKLLKDAVDKMN 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
LG+ ++ I +E+L ++R K K F AD +R+++ KG+ + D
Sbjct: 405 GFLGV-----YVEYEIPKDVEELAEKREEFRKQKNFVEADELRERINGKGYYIADLPRG 458
>gi|229136936|ref|ZP_04265563.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|228646474|gb|EEL02681.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 420
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 151/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-- 345
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHR 284
Query: 346 --------IIDPAVL-----------SALYNDLNTVSAIQALHKLARESTKN-------- 378
D L A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIQAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|229194480|ref|ZP_04321283.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
gi|228588946|gb|EEK46961.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1293]
Length = 420
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 151/444 (34%), Positives = 221/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-- 345
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLRSTNNGLERIKTAYGNLKHR 284
Query: 346 --------IIDPAVL-----------SALYNDLNTVSAIQALHKLARESTKN-------- 378
D L A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHDEKWLADLKKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|154148402|ref|YP_001406167.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
gi|166200141|sp|A7I0X6|SYC_CAMHC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|153804411|gb|ABS51418.1| cysteinyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
Length = 468
Score = 298 bits (763), Expect = 1e-78, Method: Composition-based stats.
Identities = 150/480 (31%), Positives = 230/480 (47%), Gaps = 52/480 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ I++++ +K EF ++ +R+YVCGPTVYD AH+G+A+ I FD+L R L
Sbjct: 1 MVIFDSVVKKKLEFIPLENDFVRIYVCGPTVYDDAHLGHAKSAISFDLLRRTLVALGF-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N TDIDDKI+++ S+ IT +++ D L L +PR
Sbjct: 59 KVKFVKNFTDIDDKILKKMEDSGKSL------KEITEFYISRYLDDMNALNVLRADIEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
AT I ++I ++ ++ +G AY+ + I FDTS +Y S S +K ++ RV
Sbjct: 113 ATECIDEIIEFVEELLDNGAAYKIQGDGIYFDTSKDSDYLSLSGKKDSDEN-IARVASNA 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-----FDIHGGGL 238
KK+ DF LWK +++ +G GRPGWH EC M YL DIH GG+
Sbjct: 172 QKKDEKDFALWKFDEKY---YKAKFGCGRPGWHTECVVMIKKYLTDNKQKYLIDIHAGGM 228
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL+FPHHENE AQ CA+ + A W+HNGF+ + KMSKS GN I + L
Sbjct: 229 DLLFPHHENEAAQCRCAEH-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDAL------ 281
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------KGIIDP 349
+ P +R ++ +HYR +++V L ++ L K +
Sbjct: 282 -KIVPGEALRFYLMSSHYRANFNYSVNDLFSSKKRLDKIYRLKKRLQGAKKGISDEKFKA 340
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAHILGIEVCK 398
+L AL +DLNT A+ + + + K ++L + LGI
Sbjct: 341 EILDALSDDLNTSLALSIVDSMVNSANERLDKNPKDKMKKGEILANLDFVKETLGILYTD 400
Query: 399 EHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
E+L ++ I L+ +R K K F+ AD IR++L + L D N +
Sbjct: 401 ENLYFQFGVSETKKAEISDLIAQRDAAKKEKNFALADEIREKLALQNITLMDTPNGTVWE 460
>gi|294507027|ref|YP_003571085.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
gi|294343355|emb|CBH24133.1| Cysteinyl-tRNA synthetase [Salinibacter ruber M8]
Length = 569
Score = 298 bits (762), Expect = 1e-78, Method: Composition-based stats.
Identities = 148/522 (28%), Positives = 226/522 (43%), Gaps = 75/522 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++YNTL + + I+ ++R Y CGPTVY +AHIGN R + D++ R
Sbjct: 56 SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 115
Query: 62 GEKCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
+ VT V NITD+ +DK+ +RA + N I + T+ F+
Sbjct: 116 WD--VTNVSNITDVGHLTQDDLVDPGGEDKM-QRALEREGERFAN--IYDLARHYTEAFL 170
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+D L P +PRAT H+ + + ++ HAY + + F S+ +YG S
Sbjct: 171 EDWGALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGN 230
Query: 169 KIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
+Q V E K++P DF LWK W SPWG G PGWHIECS M Y
Sbjct: 231 TEAQQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQY 290
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FD+H GG DLIFPHHE EIAQ+ + N W+H FL +EG KMSKS GNF
Sbjct: 291 LGDRFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFY 349
Query: 287 TINELLETKKFG---------GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
+ +L+ +R A++ YR+P +FT+ L A + ++
Sbjct: 350 IVRDLIAPGPDDDHVPDSVREQEGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRY 409
Query: 338 PQTST------------------SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST--- 376
+ G I L A+ +DLNT +A A +
Sbjct: 410 QDAAERVDAALAADADGPDELGGRLGPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTD 469
Query: 377 -----KNHDLLPIFNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLI 418
+ + +LG+ + ++ +S +I+ L+++R
Sbjct: 470 RLNGATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPTHLSDSIDTLLEDREA 529
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ AD IR LE+ G + D + T W+++
Sbjct: 530 ARADGEYARADAIRDTLEALGIEVMDTPD------GTEWERQ 565
>gi|229170941|ref|ZP_04298542.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
gi|228612481|gb|EEK69702.1| Cysteinyl-tRNA synthetase [Bacillus cereus MM3]
Length = 420
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 151/444 (34%), Positives = 219/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEDLLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ KE L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|83815337|ref|YP_445146.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
gi|83756731|gb|ABC44844.1| cysteinyl-tRNA synthetase [Salinibacter ruber DSM 13855]
Length = 569
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 148/522 (28%), Positives = 226/522 (43%), Gaps = 75/522 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++YNTL + + I+ ++R Y CGPTVY +AHIGN R + D++ R
Sbjct: 56 SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 115
Query: 62 GEKCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
+ VT V NITD+ +DK+ +RA + N I + T+ F+
Sbjct: 116 WD--VTNVSNITDVGHLTQDDLVDPGGEDKM-QRALEREGERFAN--IYDLARHYTEAFL 170
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+D L P +PRAT H+ + + ++ HAY + + F S+ +YG S
Sbjct: 171 EDWGALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGN 230
Query: 169 KIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
+Q V E K++P DF LWK W SPWG G PGWHIECS M Y
Sbjct: 231 TEAQQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQY 290
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FD+H GG DLIFPHHE EIAQ+ + N W+H FL +EG KMSKS GNF
Sbjct: 291 LGDRFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFY 349
Query: 287 TINELLETKKFGGR---------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
T+ +L+ +R A++ YR+P +FT+ L A + ++
Sbjct: 350 TVRDLIAPGPDDDHVPDSVREQGGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRY 409
Query: 338 PQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLAREST--- 376
+ I L A+ +DLNT +A A +
Sbjct: 410 QDAAERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTD 469
Query: 377 -----KNHDLLPIFNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLI 418
+ + +LG+ + ++ +S +I+ L+++R
Sbjct: 470 RLNGATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDREA 529
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ AD IR LE+ G + D + T W+++
Sbjct: 530 ARADGEYARADAIRDTLEALGIEVMDTPD------GTEWERR 565
>gi|228937392|ref|ZP_04100038.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228976848|ref|ZP_04137260.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228782818|gb|EEM30984.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228822225|gb|EEM68207.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
Length = 420
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFRTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|118475287|ref|YP_891963.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|166200140|sp|A0RP30|SYC_CAMFF RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|118414513|gb|ABK82933.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
Length = 459
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 152/478 (31%), Positives = 228/478 (47%), Gaps = 51/478 (10%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IY+++ ++ EF+ I +YVCGPTVYD AH+G+A+ I FD+L R L+ V
Sbjct: 3 IYDSILKQKVEFKPIREYEANIYVCGPTVYDDAHLGHAKSSISFDLLRRTLKSLGY--KV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+++N TDIDDKI+++ Q S+ IT+ ++ D L +P+AT
Sbjct: 61 KFIKNFTDIDDKILKKMSQTGKSLE------DITNHYISRYKADMYALNVADADIEPKAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ +I I + +G AY+ ++ I FDTS Y S S RK + RV K KK
Sbjct: 115 TSLTSIINYITTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRKDENLIA--RVASKDEKK 172
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF----DIHGGGLDLIF 242
+ DF+LWK E ++SP+GRGRPGWH EC AM + DIH GG DL+F
Sbjct: 173 DEKDFVLWKF---DENWYDSPFGRGRPGWHSECVAMIKDHFCGSCEFEIDIHAGGADLLF 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQ CA + A W+HNGF+ + KMSKS GN I + LE
Sbjct: 230 PHHENEAAQCRCAYN-KNLAKYWMHNGFVQVNNEKMSKSLGNSFFIKDALELV------- 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ---------TSTSKGIIDPAVLS 353
P +R ++ +HYR ++ + L ++ L K + TS + +L
Sbjct: 282 PGEALRFYLMSSHYRANFNYDIDDLKSSKKRLDKIYRLKKRLIGVKTSKTDAKFKKDILD 341
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL- 401
A+ +DLN A+ L ++ + D L+ +LGI E
Sbjct: 342 AMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEFVKELLGILYIDEFKW 401
Query: 402 -----NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ ++ I L+ +R + K K F AD IR +L + + D N +++
Sbjct: 402 FQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKLTNMDISIMDTPNGTMWEKV 459
>gi|289583246|ref|YP_003481712.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
gi|289532799|gb|ADD07150.1| cysteinyl-tRNA synthetase [Natrialba magadii ATCC 43099]
Length = 498
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 146/506 (28%), Positives = 226/506 (44%), Gaps = 73/506 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + F+ DP N+ +Y CG TV D H+G+AR + DV++R L Y
Sbjct: 1 MTLHVTNTLTGEKEPFEPQDPENVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TDI++KI+ R ++ + + + + ++ + D L L
Sbjct: 61 D--VRHVENFTDINEKIVARVGED----ELGEGEAEVAETYIERTLADMRSLNLLRAEVY 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + HIP++I L++ +I G+AYE+N + FD SS YG S +++DE + E+
Sbjct: 115 PRVSEHIPEIIDLVETLIEKGYAYESNGSVYFDVSSFEEYGKLSNQELDEIESQGDPDER 174
Query: 183 YHKKNPADFILWKRSTPMEPG----------------------WESPWGRGRPGWHIECS 220
K+NPADF LWK +EPG W+SPWG GRPGWHIECS
Sbjct: 175 SEKRNPADFALWKA-DGVEPGDIEEHRHEAAAPAEHACETALTWDSPWGEGRPGWHIECS 233
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
AMS+ +L DIH GG DL+FPHHENE+AQS A ++ AN W+H + KMS
Sbjct: 234 AMSTTHLDDTLDIHVGGRDLVFPHHENEVAQSEAATG-QQFANYWLHCELFQMADEKMSS 292
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
S GNF+T++E ++ W VIR + Y ++ + + EA + +
Sbjct: 293 SLGNFVTVDEAVD-------QWGTNVIRTFLTAGSYNSQQLYSDETIAEARERWEQLERA 345
Query: 341 STSK----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+A+ +D NT A AL +A +
Sbjct: 346 HERAVEAVDSPAARTKVEDDDLRTAVDEARETFTTAMNDDFNTREAQSALLSVASAINAH 405
Query: 379 HD------------LLPIFNASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKK 424
+ + ILG+ + ++ ++ R
Sbjct: 406 REDRDEYDYRGLRRAIDTLEELGAILGLSFTGDTTGSAALAGDVVDLVLDVREQERADGN 465
Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
+ AD +R +LES G ++D
Sbjct: 466 YERADDLRDELESLGVEVQDTDEGPT 491
>gi|184201515|ref|YP_001855722.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
gi|229558711|sp|B2GFS8|SYC_KOCRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|183581745|dbj|BAG30216.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
Length = 479
Score = 297 bits (761), Expect = 2e-78, Method: Composition-based stats.
Identities = 162/487 (33%), Positives = 240/487 (49%), Gaps = 50/487 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ Y+T I +F + P R+Y CG TV HIG+ R +VFDVL R LR+
Sbjct: 1 MTLRFYDTASATIKDFVPVHPGEARLYYCGATVQGAPHIGHVRSALVFDVLARWLRFRGL 60
Query: 63 EKCVTYVRNITDIDDKII--ERA--RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
E VT VRN+TDIDDKI+ RA Q++ + + + F + L
Sbjct: 61 E--VTTVRNVTDIDDKILVNSRASYEQDYSGDHAREPWWALAYRFEGVFGQAYAALGIDR 118
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKM 175
PT++PRAT H+P+M LIQ +I GHAY A + ++ FD S P YG +R+++++ +
Sbjct: 119 PTYEPRATGHVPEMHALIQELIDAGHAYPATDGSGDVYFDVRSWPRYGELTRQRVEDMQD 178
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK EP W+SPWGRGRPGWH+ECSAM+ YLG FD
Sbjct: 179 APDADPR-GKRDPRDFALWKGRKEDEPLSASWDSPWGRGRPGWHLECSAMAGKYLGAHFD 237
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGGLDL FPHHENE+AQS A R AN W+HNG + EG KMSKS GN ++ ++L
Sbjct: 238 IHGGGLDLRFPHHENELAQSTAAGRE--FANFWLHNGLVTYEGEKMSKSIGNTVSPQDML 295
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----------S 341
+ +R + HYR +D+ L EA + +
Sbjct: 296 REAR-------PLAVRYYLGQAHYRSVLDYRPTSLQEATAAVERVEAVLVAARAAGLGLD 348
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHIL 392
+ ++ + +DLN A+ LH+ R + L+ + +L
Sbjct: 349 RDTQDVPAEFVAVMDDDLNVPRALAVLHETVRAANSALATGDHDAARPLVAAVAGMSDVL 408
Query: 393 GIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
G+ + + + ++ L+ +R + ++SAD IR QL + G +++D
Sbjct: 409 GLLQLMDLEGAGAGGAEHRALDVLVQDLLAQRAAARTARDWASADRIRDQLAAAGVVVKD 468
Query: 445 YKNPDNG 451
Sbjct: 469 GAQGSAW 475
>gi|87200394|ref|YP_497651.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
gi|109894915|sp|Q2G5Q6|SYC_NOVAD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|87136075|gb|ABD26817.1| cysteinyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
Length = 493
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 141/495 (28%), Positives = 218/495 (44%), Gaps = 59/495 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R++ FQ + R+Y CGPTVY++ HIGN R + D+L R L +
Sbjct: 15 LRLFNSLTRQLEAFQPVHAGEARVYSCGPTVYNYPHIGNMRAYVFADLLGRTLSFKG--L 72
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
+T+V NITD+ +DK+ + AR E S I I TQ + +D L
Sbjct: 73 KLTHVINITDVGHLTDDADEGEDKMEKMARAEARS------IWDIAKHYTQAYWEDVKAL 126
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P AT ++PQMI + I H YE ++ + FD S++ +YG +R + +E +
Sbjct: 127 NIRQPARWTIATEYVPQMIAFAERIAAK-HCYELDSGLYFDVSTVADYGRLARAQTEEGE 185
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ K+N ADF +W+++ P E W+SPWGRG PGWH+ECS MS LG F
Sbjct: 186 --GRIEAVEGKRNGADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGEVLGFPF 243
Query: 232 DIHGGGLDLIFPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D HH NEIAQ CC + ++ AN + +S +
Sbjct: 244 DIHTGGIDHREIHHPNEIAQNQAFCCTNGLDVPAN--SGARIWMHNNFLVERSGKMSKSS 301
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-- 346
E L + + + RL L HYR ++F+ + L A L +
Sbjct: 302 GEFLRLQLLIDKGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRMLIAVGQLKERA 361
Query: 347 -------------IDPAVLSALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAHIL 392
+A+ +DLNT A+ ++ + D L A +L
Sbjct: 362 PEVAAQPGPRFTPFLERFDAAMSDDLNTAVALTVFEEVLGLKKVDPADKLAAVAAMDAVL 421
Query: 393 GIEVCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G+ + + + IE L+ R K F+ +D +R Q+ +KG +
Sbjct: 422 GLGLLELDRRALRIRPKGVEIDEAGIEALLDARKAARAEKDFARSDALRDQIAAKGVEVM 481
Query: 444 DYKNPDNGQRMTRWK 458
D WK
Sbjct: 482 DGD-----PLGWEWK 491
>gi|312131550|ref|YP_003998890.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
gi|311908096|gb|ADQ18537.1| cysteinyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
Length = 496
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 146/511 (28%), Positives = 225/511 (44%), Gaps = 70/511 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +K+YN+L RK F+ ++P + MYVCGPTVY+ H+GN R + FD+LYR L +
Sbjct: 1 MQALKLYNSLSRKKELFEPLNPGYVGMYVCGPTVYNNVHLGNIRTFLTFDILYRYLLHTG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ +DKI + A+ E + + T F
Sbjct: 61 Y--KVRYVRNITDVGHLVGDGDEGEDKIGKIAKLEKLE------PMEVVQRYTNDFHDVL 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS----- 166
+ L P+ +P AT H+ + I +Q++I G AYE+N + FD + G+
Sbjct: 113 NQFNFLPPSIEPSATGHLIEQIEAVQDLIQKGLAYESNGSVYFDINKYNEAGNNYGKLSG 172
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSH 225
R D + + K+NP DF LWK++ P W SPWG+G PGWH+EC+ MS
Sbjct: 173 RILEDLLNETRALDGQAEKRNPLDFALWKKAAPEHIMQWNSPWGKGFPGWHLECTCMSVK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL FPHHE EIAQ + W+H+ L + G+KMSKS GN
Sbjct: 233 YLGNQFDIHGGGMDLKFPHHECEIAQGKGLTGEDP-VRYWMHSNMLTVNGQKMSKSLGNS 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
EL+ +++ +R ML +HYR +DF+ L A+ +
Sbjct: 292 FLPRELITGDHPLLEQAYSPMTVRFFMLQSHYRSTLDFSNDALKAAQKGYRRMLNGMKIA 351
Query: 345 GIIDPA---------------------VLSALYNDLNTVSAIQALHKLAREST------- 376
+ AL +DLNT + L L +
Sbjct: 352 KDLTYEPNAEVDLDEKKIADIQKAISGFYDALNDDLNTAVGLAQLFTLLKYVNMIYMNQL 411
Query: 377 ----KNHDLLPIFNASA-----HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ + ILG+ E + + ++ ++ +++
Sbjct: 412 ASAALGEETFEALKKNFILLTQEILGL---AEEVPGDGESVLKGMLSLYKEYKAAQQYDK 468
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D IR ++ +++D K+ + W+
Sbjct: 469 VDEIRAYFKNNRMVIKDMKHKIDWA----WE 495
>gi|153831904|ref|ZP_01984571.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
gi|148871902|gb|EDL70725.1| cysteinyl-tRNA synthetase [Vibrio harveyi HY01]
Length = 457
Score = 297 bits (760), Expect = 3e-78, Method: Composition-based stats.
Identities = 153/471 (32%), Positives = 229/471 (48%), Gaps = 37/471 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K++++NTL R + F I+ + +Y CGPTVYD+AH GN R + DVL R L
Sbjct: 3 QPKLQLFNTLGRALEPFNTIESGKVGLYACGPTVYDYAHAGNLRTYLFVDVLRRTLELNG 62
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+ V +V NITD+ +DK+ + AR++ N + I F+ D
Sbjct: 63 YD--VNHVMNITDVGHLVSDADTGEDKMEKGARKQ------NKSAWEIAKYFEDVFLDDL 114
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
RL + P+ RA HI + I +Q + G Y+ ++ + FD++ +P+YG ++ +
Sbjct: 115 NRLNIIKPSIICRAAEHIQEQIEFVQELEQKGFTYQTSDGVYFDSAKLPDYGKLAKLDRE 174
Query: 172 EQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ G RV KK+P DF LWK TP + WESPWG G PGWHIECSAM+ YLG+
Sbjct: 175 GLEAGIRVEMAE-KKSPTDFALWKFSGDTPRQMEWESPWGVGFPGWHIECSAMAEKYLGE 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
VFDIH GG D I HH NEIAQ + AN W+H FL L K+SKS +
Sbjct: 234 VFDIHVGGEDHIPVHHTNEIAQCQAKNG-HVQANYWLHGFFLQLNKEKISKSGTS----- 287
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---QTSTSKGI 346
L + + R +L +HYR + FT + L A+ L + G
Sbjct: 288 --LRLDALIEKGYDPLAYRYLVLTSHYRSHLSFTWESLDAAQTALKRLKAKVSALPEGGK 345
Query: 347 IDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+D + NDL AI + +L + + D+ + G+E+ +
Sbjct: 346 VDQTFVERFMSLINNDLAIPQAIALMWELLGSALNDADIKATARYFDSVFGLEL-DKVEE 404
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ I I +LV+ RL + K KK+ AD IR+Q+ G+ + D + +
Sbjct: 405 EEIPREILELVELRLQMKKQKKYQQADEIRQQVAEFGYRINDAGDSSTVSK 455
>gi|228905887|ref|ZP_04069784.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853702|gb|EEM98462.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 420
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 150/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKDAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---- 343
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLAELEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTST 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELAQEEL---LDEEIEALIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KDRNIILEDT------AQGTRWKR 419
>gi|303390212|ref|XP_003073337.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
gi|303302483|gb|ADM11977.1| cysteinyl-tRNA synthetase [Encephalitozoon intestinalis ATCC 50506]
Length = 482
Score = 296 bits (759), Expect = 3e-78, Method: Composition-based stats.
Identities = 141/484 (29%), Positives = 228/484 (47%), Gaps = 44/484 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +K+YN++ + F + ++MY+CGPTVYD HIG+AR ++FDV+ R+L
Sbjct: 3 MDRTLKLYNSISKTSEVFIPRRDNEVKMYICGPTVYDSPHIGHARTYVMFDVIRRVLSD- 61
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y V +V NITDIDDKII RA + S + +T K T++F +D L P+
Sbjct: 62 YLRYNVNFVMNITDIDDKIIVRANETGVS------MDEVTRKYTEEFFEDMKALNVRPPS 115
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
T+++ ++I I+ + ++G AYE+ + F+ + + + K + T
Sbjct: 116 FVTFVTSYVDKIIKFIEKLEVNGFAYESEGSVYFNLNKYQDKHGYPLFKNKDGI-NTEGD 174
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K+NP DF+LWK+S EP +ES WG GRPGWHIECS MSS LG+ DIH GG+DL
Sbjct: 175 ENKDKRNPCDFVLWKKSKENEPRYESKWGYGRPGWHIECSVMSSDILGEDLDIHAGGIDL 234
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENEIAQ E ++H G LN++G KMSKS NF TI E LE
Sbjct: 235 AFPHHENEIAQCQAYFMKEPWVKCFLHTGHLNIDGLKMSKSLKNFTTIKEALEVISPRQL 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLT-----------------EAEILLSKWPQTSTS 343
+ M + RE + F E + L +
Sbjct: 295 RILFLHHQWNKDMNYEREHLKFAESIEKKIFNFMSVAESMRKNTLEFKTLEDADREVLGE 354
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------LLPIFNASAHILGI 394
+ + +++ ++++T + ++ + ++ + + + G+
Sbjct: 355 LKNVQKVIHNSILDNIDTPTVMKKIVEMINFTNSRMKDISSSTVLVVKDYIKEIMEVFGL 414
Query: 395 EVCKEHLNKNISIAIEKLV-----QERLILLKMKKF----SSADYIRKQLESKGFILEDY 445
+ + I +L+ R + + + + D+IR+ ++ G+I+ED
Sbjct: 415 NEVEAQTSSKEDS-IAQLLGDFRENIRRMARQKEPYSSFLKKCDWIRESIKDHGYIIEDN 473
Query: 446 KNPD 449
Sbjct: 474 NEGS 477
>gi|222823636|ref|YP_002575210.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
gi|254781231|sp|B9KFX4|SYC_CAMLR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|222538858|gb|ACM63959.1| cysteinyl-tRNA synthetase [Campylobacter lari RM2100]
Length = 460
Score = 296 bits (759), Expect = 4e-78, Method: Composition-based stats.
Identities = 145/479 (30%), Positives = 225/479 (46%), Gaps = 51/479 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++ +K EF + +Y+CGPTVYD AH+G+AR + FD L R+L E
Sbjct: 1 MVFFDSVLKKKCEFIPHEAKKANIYLCGPTVYDDAHLGHARSSVCFDFLRRVLLASGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ ++ S+ IT+ +++ +D L L P +P+
Sbjct: 60 -VVFARNYTDIDDKILKKMQESGKSL------KEITNFYIKRYEEDMQALNILEPDFKPK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT +I QMI I+ ++ AY+ + I FDTS Y S+R +++ +
Sbjct: 113 ATAYIEQMITYIEKLLELNLAYKLEDGIYFDTSKDDKYFYISKRNLEDNQSRLEESVA-- 170
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
KKN +DF+LWK P + +G+GRPGWH EC M DIH GG+DL+FPH
Sbjct: 171 KKNDSDFVLWKFDEKFYP---ASFGKGRPGWHTECVVMIESIFKDKLDIHAGGIDLLFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE Q C + E AN W+HNGF+ + G KMSKS GN + + L + +
Sbjct: 228 HENEACQCRCKNNHE-LANFWLHNGFVQINGEKMSKSLGNSFFLKDSL-------KLFNG 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDPAV 351
V+R +L HYR ++ ++ L A+ L K+ + + +
Sbjct: 280 EVLRFYLLSVHYRAHFNYALEDLQAAKKRLDKFYRLKKRLNLNAFIDEKTIIESKVSQNI 339
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV---- 396
L L +DLN A+ L + ES D L + I GI
Sbjct: 340 LDVLNDDLNASKALALLDEFINESNIYLDQNPKDKAYKIQLEKTLKELSFIFGIGFIDTI 399
Query: 397 --CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ +++ IE+ + R + K + AD IR L + +L D N ++
Sbjct: 400 KYFQFGISEEKCQEIEEKITLRNKAKQEKNYVLADQIRDDLAKENILLMDTPNGVVWEK 458
>gi|86150258|ref|ZP_01068485.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597534|ref|ZP_01100768.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562430|ref|YP_002344209.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|11387149|sp|Q9PPB8|SYC_CAMJE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|85839374|gb|EAQ56636.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190126|gb|EAQ94101.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360136|emb|CAL34930.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926048|gb|ADC28400.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
IA3902]
gi|315928267|gb|EFV07583.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
DFVF1099]
gi|315929359|gb|EFV08565.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
Length = 462
Score = 296 bits (759), Expect = 4e-78, Method: Composition-based stats.
Identities = 155/483 (32%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIGIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|228989298|ref|ZP_04149289.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228995481|ref|ZP_04155149.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764210|gb|EEM13089.1| Cysteinyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228770376|gb|EEM18949.1| Cysteinyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 420
Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats.
Identities = 148/444 (33%), Positives = 220/444 (49%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I I+ ++ G+AYE+ ++ + T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIEELVKKGYAYESEGDVYYKTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGKGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-- 345
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYNPQLIRFFMLSVHYRHPINFSEELLQNTNNGLERIKTAYGNLKHR 284
Query: 346 -----IIDPAVLSA--------------LYNDLNTVSAIQALHKLARESTKN-------- 378
+ + +D NT +A+ L+ LA + +
Sbjct: 285 MESSTDLTDHNEKWLAEMKKFQVAFEAAMDDDFNTANAVTELYNLANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ F ILG+E+ KE L + IE L+Q+R+ K + F+ +D IR L
Sbjct: 345 AVLEAYVKQFETLFGILGLELTKEEL---LDEEIEVLIQKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419
>gi|162139903|ref|YP_716650.2| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
Length = 513
Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats.
Identities = 152/520 (29%), Positives = 224/520 (43%), Gaps = 81/520 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T R++ F+ + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MGLHLYDTRRRRVRPFEPLRPGHVGVYVCGPTVQSPPHVGHLRTALPFDLLRRWLVQS-- 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT V+N+TDIDDKII A ++ S+ + ++ T+ F + L PT Q
Sbjct: 59 EHEVTLVQNVTDIDDKIIVNADRDGTSV------WELATRQTRAFDDAYRTIGILPPTIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI LI +I GHAY + F S P YG+ S ++ D +
Sbjct: 113 PRATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPDSM--LPSAESE 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 171 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINE------ 290
PHHENE AQ+ CA E+ A W+H G L G KMSKS GN + + +
Sbjct: 231 PHHENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR 290
Query: 291 -------LLETKKFGGRSWPAPVIRLAMLMT-----HYREPIDF--------------TV 324
LL + + + R +D
Sbjct: 291 PQVLRYHLLSAHYRSTLEYTPEALGESAAAHDRVETFVRNALDILGGPGEAAALAADDGP 350
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV------------------SAIQ 366
+++ ++ S + G + T A+
Sbjct: 351 SAVSDGRRRTARGGAASDAVGAAAGGFGAGGPEAGLTPQRAWADFAAAMDDDLAVGRALA 410
Query: 367 ALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE------HLNKNISIAIEK 411
A+ + + + +LG++ ++ L + ++
Sbjct: 411 AIFGAVGQGNQVLSKAHSRKLAGWVDVTRRMLGVLGLDPHEQWPSAGAELRPALDGVVQI 470
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ R + F+ AD IR +L + G I+ED
Sbjct: 471 ALDLRSAARARRDFAEADSIRSRLAAAGLIVEDTPEGQRW 510
>gi|309777271|ref|ZP_07672233.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
gi|308914951|gb|EFP60729.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
Length = 446
Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats.
Identities = 155/467 (33%), Positives = 235/467 (50%), Gaps = 50/467 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K++N++ +K+ EF+ + + MYVCGPTVY++ HIGNARP++VFD L R +
Sbjct: 1 MMKLFNSMNQKVEEFKPLHEHEVHMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQAIGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N TD+DDKII+ A++ S + IT K + KD L + P P
Sbjct: 60 -NVKMVSNYTDVDDKIIKVAKECGVSE------ADITEKFIDAYNKDRLSLHAMMPDAAP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R T + +I I+ ++ G+AYE + ++ F +S+ +YG S +++++ +G R+ E
Sbjct: 113 RVTETMDAIIAFIKLLVDKGNAYEIDGDVYFRVNSVESYGKLSNQQVEDLLVGARIDENS 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--VFDIHGGGLDLI 241
K+NP DF LWK+ T W+SPW GRPGWH EC M + DIHGGG+DL
Sbjct: 173 KKENPLDFTLWKK-TEEGIQWDSPWSVGRPGWHTECVVMINQEFHDEHTIDIHGGGMDLK 231
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A AN WIHNG +N++G KMSKS GN I +++
Sbjct: 232 FPHHENEIAQSRAAYD-SPIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIA-------K 283
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------------SKG 345
V+R ML HYR P++ + + A+ L++
Sbjct: 284 IGGNVLRWVMLSAHYRAPLNINEEAIETAKKELNRVATAMKQAYVKLNLADVAVAEAYDE 343
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLAR-----------ESTKNHDLLPIFNASAHILGI 394
L A+ +DLNT +A A+ + + + LL +LGI
Sbjct: 344 TQLAPFLDAMQDDLNTPNAFAAVFETVKVLNQTLRQRDADLNAVAALLHTLEKMMEVLGI 403
Query: 395 EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++ + + + ++L + +K K F++AD R QL KG +
Sbjct: 404 DIPRLTMCEED----KQLHKLWKAAVKEKDFATADQYRAQLIEKGIL 446
>gi|148926966|ref|ZP_01810643.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8486]
gi|145845050|gb|EDK22147.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8486]
Length = 462
Score = 296 bits (758), Expect = 5e-78, Method: Composition-based stats.
Identities = 155/483 (32%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|284165104|ref|YP_003403383.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
gi|284014759|gb|ADB60710.1| cysteinyl-tRNA synthetase [Haloterrigena turkmenica DSM 5511]
Length = 498
Score = 296 bits (757), Expect = 5e-78, Method: Composition-based stats.
Identities = 138/505 (27%), Positives = 230/505 (45%), Gaps = 71/505 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + F+ DP ++ +Y CG TV D H+G+AR + DV++R L Y
Sbjct: 1 MTLHVTNTLTGEKEPFEPRDPESVLLYYCGLTVSDPPHLGHARSWVHVDVMHRWLEYIGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TDI++KI+ R ++ + + + ++ + D L L
Sbjct: 61 D--VRHVENFTDINEKIVARVGED----DLGEDELHVAETYIERTLADMRSLNLLRAEVY 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P++I L++ ++ G+AYE+N + FD +S YG S +++DE + E+
Sbjct: 115 PRVSEHVPEIIDLVETLVEEGYAYESNGSVYFDVTSFEEYGKLSNQELDEIESQGDPDER 174
Query: 183 YHKKNPADFILWKRSTPMEPG---------------------WESPWGRGRPGWHIECSA 221
K++PADF LWK E WESPWG GRPGWHIECSA
Sbjct: 175 SEKRHPADFALWKAGGVDESAIEEHRHEGAAPAEEACETSQTWESPWGEGRPGWHIECSA 234
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS +L + DIH GG DL+FPHHENE+AQS A + AN W+H ++ KMS S
Sbjct: 235 MSMTHLDETLDIHVGGRDLVFPHHENEVAQSEAATG-QAFANYWLHCELFQMDDEKMSSS 293
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF+T+++ ++ W V+R + Y ++ + + EAE + +
Sbjct: 294 LGNFVTVDDAVD-------QWGTNVLRTFLTAGSYNSKQLYSDETIAEAEERWDRLERAY 346
Query: 342 TSK----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN- 378
+ + ++A+ +D NT A AL +A +
Sbjct: 347 EAAVEAVDSPDARTKVEDASFRDEIETARESFVAAMNDDFNTREAQSALLSVATAINAHL 406
Query: 379 -----------HDLLPIFNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKF 425
D + + +LG+ E ++ +++ R + +
Sbjct: 407 EDRAEYDYRGLRDAVDVLEELGAVLGLSFAGETTGTADLAGDVVDLVLEVREREREAGNY 466
Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
AD +R +L++ G ++D +
Sbjct: 467 ERADDLRDELQALGIEVQDTDDGAT 491
>gi|283957215|ref|ZP_06374677.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791287|gb|EFC30094.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 462
Score = 295 bits (756), Expect = 7e-78, Method: Composition-based stats.
Identities = 154/483 (31%), Positives = 232/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R + +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLSSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKENKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|312881510|ref|ZP_07741296.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
BAA-2122]
gi|309370787|gb|EFP98253.1| cysteinyl-tRNA synthetase CysS [Vibrio caribbenthicus ATCC
BAA-2122]
Length = 457
Score = 295 bits (756), Expect = 8e-78, Method: Composition-based stats.
Identities = 151/467 (32%), Positives = 216/467 (46%), Gaps = 38/467 (8%)
Query: 1 MKKK-IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M + + +++T++R+I F AI + +Y CGPTVYD+AHIGN R + D L R+
Sbjct: 1 MNQTTLNLFDTMKRQIIPFNAIKNGKVSLYACGPTVYDYAHIGNLRTYLFVDTLKRVFTL 60
Query: 60 YYGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
+ V +V NITD+ +DK+ + AR++ N + I F
Sbjct: 61 --NDYQVNHVMNITDVGHLVSDGDTGEDKMEKGARKQ------NKSAWEIARYFENIFFN 112
Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
D +L P RAT HI + I IQ++ G Y ++ + FDT + +YG +R
Sbjct: 113 DLAKLNISRPNITCRATEHIQEQIEFIQSLEEQGFTYLTDDGVYFDTRKLNDYGKLARLD 172
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
G R+ KK+P DF LWK + W SPWG G PGWHIECSAM+ YL
Sbjct: 173 KLGLSPGKRIELG-DKKSPTDFALWKLSGRRQRQMEWPSPWGIGFPGWHIECSAMAEKYL 231
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
GK FDIH GG D I HH NEIAQ + AN W+H FL L+ K+SKS +
Sbjct: 232 GKQFDIHIGGEDHIPVHHTNEIAQCEAKNG-HIQANYWLHGYFLQLDNEKISKSGVS--- 287
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
L + + R L +HYR ++FT Q L A+ + S
Sbjct: 288 ----LTLNTLIEKGFDPLDYRYLTLTSHYRSHLNFTWQGLAGAQKARRRLMTKLQSLPKG 343
Query: 345 GIIDPAVLSAL----YNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
G IDP+ S D N A+ + + D + G+++ +E
Sbjct: 344 GKIDPSYQSQFVGFINQDFNMPRALALVWAILDSHLNGADKRATLVYFDQVFGLDMEREV 403
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I + IEKL Q+R L + + AD IR +LE G+ + D +
Sbjct: 404 KL-IIPVEIEKLAQQRHQLKQQGNYQDADQIRAELEKLGYQINDSAD 449
>gi|168700079|ref|ZP_02732356.1| cysteinyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 519
Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats.
Identities = 156/540 (28%), Positives = 226/540 (41%), Gaps = 105/540 (19%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+TL RK F + MYVCGPTVY +HIG+ ++FD + R L Y
Sbjct: 1 MALQVYSTLTRKKEPFHKQPGDTVTMYVCGPTVYKPSHIGHMVGPVIFDTVKRYLTYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA-----CL 117
V +V NITD+DDK+I RA+++ ++P + +K T+ + L
Sbjct: 61 --KVKWVVNITDVDDKLIGRAQEQKTTVP------ELAAKMTEDYFACLKALNIAVSSPD 112
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
PRAT HI MI +IQ++I HAYE ++ + FD S +YG + R ++ + G
Sbjct: 113 GIDVFPRATQHIGGMIQVIQDLIKKDHAYEVDDGVYFDVSKDADYGKLTNRDPEQMEAGA 172
Query: 178 RVPEKYHKKNPADFILWKRS--TPMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFDI 233
R+ K+NP DF LWK P E ++SP+ GRPGWHIEC+ M+ LG+ DI
Sbjct: 173 RLEPNPKKRNPGDFALWKSKPGEPAEVQFDSPFKCGRGRPGWHIECTCMAIKELGETLDI 232
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGGLDL FPHHENE+AQS + A +W+HNG L L+ KM+ S GN + + + L
Sbjct: 233 HGGGLDLQFPHHENELAQSESWTG-KPFARVWMHNGLLKLKSGKMAGSLGNVLNVADAL- 290
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTV----------------------------- 324
++ +R +L THYR PID
Sbjct: 291 ------KAVGGGALRFFVLNTHYRSPIDLGDWEPKPGSIPSNLESAKVAFETFVRFAERV 344
Query: 325 --------QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
L + + + +DLNT L +L
Sbjct: 345 QRVTGQPFASLPAPVLFDPNRKFVQPALAEFAQRFHDFMDDDLNTGGVTGVLFELVTSLN 404
Query: 377 KNHDL--------------------LPIFNASAHILGIEVCKEHL-----NKNISIAIEK 411
+ D + A +LG+ E N+ + ++
Sbjct: 405 RLADTTKLEDPATSNPQAKAEFTEGASLVKEIAQVLGLTFTAETKTLDGGNELVGGLMQL 464
Query: 412 LVQERLILL-----KMKK-------FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
L+ R L K F D IRK+L G LED T W+
Sbjct: 465 LLDLRANLRASAKEAAKDNPLRKALFDQTDLIRKRLGELGVTLEDR------PGGTTWRV 518
>gi|218283691|ref|ZP_03489652.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
gi|218215680|gb|EEC89218.1| hypothetical protein EUBIFOR_02246 [Eubacterium biforme DSM 3989]
Length = 443
Score = 295 bits (755), Expect = 1e-77, Method: Composition-based stats.
Identities = 159/464 (34%), Positives = 226/464 (48%), Gaps = 48/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+ + I E + I+ I MYVCGPTVY++ HIGNARP++VFD L + L E
Sbjct: 1 MKLYNSYSQTIEELKPIEEGKISMYVCGPTVYNYPHIGNARPIVVFDTLKKALSAQGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT+ N TD+DDKII+ A ++ N + IT K + L P + PR
Sbjct: 60 -VTFASNYTDVDDKIIKTAIEQ------NVSEKEITDKFIAAYNDVRRGLHADLPDYAPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T + ++I I ++ +G AY+ ++ F +S YG S + ID+ +G R+ E
Sbjct: 113 VTETMDRIIEFIDKMVKNGSAYQVGGDVYFRVNSDKKYGELSHQSIDDLMVGARIDENEK 172
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV-FDIHGGGLDLIFP 243
K+NP DF LWK +T W+SPW +GRPGWH EC M K DIHGGGLDL FP
Sbjct: 173 KENPLDFTLWKETTEG-IKWDSPWSKGRPGWHTECVVMIQDVFKKTLIDIHGGGLDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ + ANIW+HNG +N+ G KMSKS GN +L+
Sbjct: 232 HHENEIAQCEVCNDTH-LANIWVHNGMININGIKMSKSLGNVWWAKDLIANH-------G 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------------GIID 348
+ R M+ THYR P++ + ++ L K
Sbjct: 284 GNLTRWLMISTHYRAPLNLNEEAFATSKKELDKIAAAYKQACVKLVLSSAQEATTFDETY 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------FNASAHILGIEVC 397
A + AL +DLNT +AI +++L ++ + I +ILGIE
Sbjct: 344 TAFIDALNDDLNTPNAISVVYELVKKINQAVRQREIDVENLAVLVHTLEKMLYILGIEFD 403
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
K + + Q +K K F +AD +R+ L KG +
Sbjct: 404 KVSMTNEDKE----MYQNWRSAVKEKDFKTADTLRQTLIEKGIL 443
>gi|86152065|ref|ZP_01070277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
260.94]
gi|85840850|gb|EAQ58100.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
260.94]
Length = 462
Score = 295 bits (754), Expect = 1e-77, Method: Composition-based stats.
Identities = 154/483 (31%), Positives = 232/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE Q C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEATQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|255083368|ref|XP_002504670.1| cysteine-trna ligase [Micromonas sp. RCC299]
gi|226519938|gb|ACO65928.1| cysteine-trna ligase [Micromonas sp. RCC299]
Length = 522
Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats.
Identities = 156/349 (44%), Positives = 206/349 (59%), Gaps = 26/349 (7%)
Query: 3 KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ + ++NT+ R+ F D + MYVCG TVYD++HIG+AR + FDVLYR L
Sbjct: 8 QTLMLHNTMARRKEPFSPRDSTGKKVNMYVCGVTVYDYSHIGHARVYVAFDVLYRQLTRM 67
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTY RN TD+DDKII+RA + + + + F +D L CL PT
Sbjct: 68 GYD--VTYCRNFTDVDDKIIKRANENG------EECDALVDRFIAAFHEDIDALGCLRPT 119
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRAT+HI ++ + + +I G+AY A+ ++ F ++P YGS S RK ++ + G RV
Sbjct: 120 IEPRATDHIKDIVTMCERLIEKGYAYPADGDVYFSVDALPEYGSLSGRKQEDNRAGERVA 179
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KKNPADF LWK + P EP W+SPWG GRPGWHIECSAM LGK DIHGGG DL
Sbjct: 180 VDDRKKNPADFALWKAAKPGEPTWDSPWGAGRPGWHIECSAMIDSILGKSIDIHGGGQDL 239
Query: 241 IFPHHENEIAQS-----CCADR----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
+FPHHENE+AQS CCA E W+HNGF+ ++ KMSKS GNF TI E+
Sbjct: 240 VFPHHENELAQSTASCRCCATDGDEPEEPFVRYWVHNGFVKVDSEKMSKSLGNFFTIREV 299
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
E + +R +L THYR PI++T + L EA L QT
Sbjct: 300 TE-------KYHPFALRWMLLGTHYRAPINYTQRALEEASDRLYYLYQT 341
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 15/32 (46%), Gaps = 1/32 (3%)
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
F+ +D IR +L +KG L D + T
Sbjct: 487 DFAESDRIRDELGAKGVALMDG-GSQVWRPAT 517
>gi|108706133|gb|ABF93928.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 338
Score = 294 bits (753), Expect = 2e-77, Method: Composition-based stats.
Identities = 152/338 (44%), Positives = 212/338 (62%), Gaps = 16/338 (4%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++N++ +K F+ + +RMYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 9 PQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 68
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII+RA + + ++ ++S+ +F+ D +L CL PT +
Sbjct: 69 E--VEYVRNFTDIDDKIIKRANEAG------ETVTSLSSRFINEFLLDMAQLQCLPPTCE 120
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T+HI +I LI I+ +G AY ++ F + P Y S S RK+D G+RV
Sbjct: 121 PRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKLDHNLAGSRVAVD 180
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NPADF LWK + EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHGGG DLIF
Sbjct: 181 TRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHGGGKDLIF 240
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS A E W+HNGF+N + +KMSKS+ NF TI ++++ +
Sbjct: 241 PHHENELAQSRAAY-PESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRDIIDL-------Y 292
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
+R ++ THYR ++ + + L A + Q
Sbjct: 293 HPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQV 330
>gi|302834082|ref|XP_002948604.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
gi|300266291|gb|EFJ50479.1| hypothetical protein VOLCADRAFT_58337 [Volvox carteri f.
nagariensis]
Length = 509
Score = 294 bits (752), Expect = 2e-77, Method: Composition-based stats.
Identities = 163/507 (32%), Positives = 239/507 (47%), Gaps = 82/507 (16%)
Query: 7 IYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+NT+ + F+ + + MYVCG TVYD++HIG+AR + FDVLYR L G
Sbjct: 22 FFNTMSKSKELFRPRLADGRVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLTAACGY-D 80
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YVRN TDIDDKII RA+Q S +T + ++F +D L L PT +PRA
Sbjct: 81 VQYVRNFTDIDDKIIARAQQSGVD------PSELTERFIREFNQDMAALNVLTPTLEPRA 134
Query: 126 TNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +PQMI I I+ HGHAY ++ FD +S+ YG S R +++ + G RV
Sbjct: 135 TAFVPQMISTITAIMQHGHAYAVEGGDVFFDVTSLEGYGRLSGRALEDNRAGERVAVDGR 194
Query: 185 KKNPADFILWKRS-----TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++PADF L PG G G + C +S +L + G D
Sbjct: 195 KRSPADFALILVCLGGTGRDGPPGIVIFGGWGFSWF--RCFRAASGFLVG-WPQFLRGRD 251
Query: 240 LIFPHHENEIAQSCCADRIEK-------TANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
L+FPHHENE+AQS A W+HNGF+N++ KMSKS GNF TI ++L
Sbjct: 252 LVFPHHENELAQSQAACGYPDQLHNGTDFVRYWLHNGFVNVDSEKMSKSLGNFFTIRDVL 311
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--- 349
+ + +R +L YR P++++ + L E S+ ++ ++P
Sbjct: 312 SS-------YHPLALRWFLLAAQYRAPLNYSDKGLEE---ASSRLYYVIQARADVEPAAT 361
Query: 350 --------------AVLSALYNDLNTVSAIQALHKLAREST---------KNHDLLPIFN 386
VLSAL +DLNT +A+ AL R K D L +
Sbjct: 362 SSSSSTSSGAVLVSEVLSALADDLNTPAAVGALSGPLRTINDLMTTKAGRKRPDRLAVLA 421
Query: 387 AS-------AHILGIEV-----CKEHLNKNISIA---IEKLVQERLILLKMKKFSSADYI 431
+LG+E + L ++ A +E+L+Q + + K F+ +D I
Sbjct: 422 QLHVAMGVVMELLGMEPNSGTKQQPQLEGSLEGAAAGLEQLLQL-IQARQAKDFARSDAI 480
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
R +L S+G +L D + T W+
Sbjct: 481 RLELASRGILLLDT------PKGTTWR 501
>gi|109894936|sp|Q2S3T5|SYC_SALRD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
Length = 516
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 148/522 (28%), Positives = 226/522 (43%), Gaps = 75/522 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++YNTL + + I+ ++R Y CGPTVY +AHIGN R + D++ R
Sbjct: 3 SPTFRLYNTLTHETEPVEPIEEEHLRFYSCGPTVYMYAHIGNFRSFLTADLIRRTAEAIG 62
Query: 62 GEKCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFV 108
+ VT V NITD+ +DK+ +RA + N I + T+ F+
Sbjct: 63 WD--VTNVSNITDVGHLTQDDLVDPGGEDKM-QRALEREGERFAN--IYDLARHYTEAFL 117
Query: 109 KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+D L P +PRAT H+ + + ++ HAY + + F S+ +YG S
Sbjct: 118 EDWGALNLREPEVRPRATEHVTDQLEAVIELVEKEHAYTTDQGVYFSVESVEDYGHLSGN 177
Query: 169 KIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
+Q V E K++P DF LWK W SPWG G PGWHIECS M Y
Sbjct: 178 TEAQQLQATERDVVEDPDKRDPRDFALWKHDPQHLMHWHSPWGWGYPGWHIECSVMGMQY 237
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG FD+H GG DLIFPHHE EIAQ+ + N W+H FL +EG KMSKS GNF
Sbjct: 238 LGDRFDLHTGGEDLIFPHHECEIAQNQSLAG-HQVVNYWVHTRFLQVEGEKMSKSKGNFY 296
Query: 287 TINELLETKKFGGR---------SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
T+ +L+ +R A++ YR+P +FT+ L A + ++
Sbjct: 297 TVRDLIAPGPDDDHVPDSVREQGGVDPLALRYALMQGQYRKPFNFTLDTLHTAARHVRRY 356
Query: 338 PQTSTSKGI------------------IDPAVLSALYNDLNTVSAIQALHKLAREST--- 376
+ I L A+ +DLNT +A A +
Sbjct: 357 QDAAERVDAALAADADGPDELGGRLRPIYDRTLEAMCDDLNTPAATAAALDGVKAIEQTD 416
Query: 377 -----KNHDLLPIFNASAHILGIEVCKEHLNKN-------------ISIAIEKLVQERLI 418
+ + +LG+ + ++ +S +I+ L+++R
Sbjct: 417 RLNGATARSARNWLDRTNALLGVVEPEHEADQRTDAGSENGLAPAHLSDSIDTLLEDREA 476
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+++ AD IR LE+ G + D + T W+++
Sbjct: 477 ARADGEYARADAIRDTLEALGIEVMDTPD------GTEWERR 512
>gi|162447013|ref|YP_001620145.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
gi|187629784|sp|A9NEI9|SYC_ACHLI RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|161985120|gb|ABX80769.1| cysteinyl-tRNA synthetase [Acholeplasma laidlawii PG-8A]
Length = 434
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 155/453 (34%), Positives = 218/453 (48%), Gaps = 34/453 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L KI EF+ I + MYVCGPTVYD HIGN RP++ FDV+ R L+Y
Sbjct: 1 MLKIYNSLSNKIEEFKPIHEKKVNMYVCGPTVYDDIHIGNGRPVVFFDVVKRYLQYLDYG 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y NITD+DDKII+RA++ H + + + T F + ++ P
Sbjct: 61 --VKYASNITDVDDKIIDRAQKLHITE------KELATTYTNNFFEIAKKIGGYNFDVTP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
ATN+I +MI I +I G AY+ + + F I +YG S +++ + K G R+ +
Sbjct: 113 HATNYIEEMIKFIGELISDGFAYKTQSGVYFRVDKIKDYGILSNQQVKDLKTGVRIDLET 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+ DF LWK +T + +PWG GRPGWH EC M++ G DIHGGG DL FP
Sbjct: 173 DKEKDYDFALWK-NTEEGIKYHAPWGDGRPGWHTECVVMTNEIFGGEIDIHGGGFDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+H G L+L KMSKS GN I + +L+ + +
Sbjct: 232 HHENEIAQSV-AKHDHHLAKYWMHVGRLDLANEKMSKSLGNDIKLKDLV-------QVYN 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------PQTSTSKGIIDPAVLSA--- 354
RL +L HYR PI F+ + + + K I+ L
Sbjct: 284 PNAYRLMLLAHHYRAPIQFSDDLIEQYQKAYDKISYTLNKWHFHMILNNINENGLDHESM 343
Query: 355 ------LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
+ +D T I + KL ++ K + +N IL ++ + +
Sbjct: 344 EYFEGFMNDDFATPRVISLIDKLIKDLNKAFKV-ENYNTIIQILSTLGINPNILEVLEDD 402
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
I+ K + AD RK L KGFI
Sbjct: 403 IQN-YNNWQQARLEKNYEKADIYRKPLLDKGFI 434
>gi|297572189|ref|YP_003697963.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
gi|296932536|gb|ADH93344.1| cysteinyl-tRNA synthetase [Arcanobacterium haemolyticum DSM 20595]
Length = 475
Score = 293 bits (751), Expect = 3e-77, Method: Composition-based stats.
Identities = 155/506 (30%), Positives = 234/506 (46%), Gaps = 87/506 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY++ R + EF ++ P + +Y+CG TV HIG+ R + FDVL R LR
Sbjct: 1 MALHIYDSATRAMREFTSLVPGKVGIYLCGATVQGSPHIGHMRSAVAFDVLVRWLRRSGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E T VRN+TDIDDKI+ ++ +F + L L PT++
Sbjct: 61 ET--TMVRNVTDIDDKILAKSADAGRE------FWAHAYIYENEFTQAYDALGVLRPTYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P+MI I +I GHAY + + FD +S+ +YGS +R+ +D+ V
Sbjct: 113 PRATGHVPEMIAFIARLIERGHAYPGDSGNVYFDVASLADYGSLTRQTLDDFNDDAAV-- 170
Query: 182 KYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ K+NP DF LWK + P EP W++PWGRGRPGWH+ECSAM+ YLG+ FDIHGGG+
Sbjct: 171 EPDKRNPRDFALWKAAKPGEPASASWDTPWGRGRPGWHLECSAMAGKYLGESFDIHGGGI 230
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+HN ++ ++G KMSKS GN + ++ +LE
Sbjct: 231 DLRFPHHENEQAQSHGAGYG--FAQYWMHNAWVTIDGEKMSKSLGNSLIVSRILE----- 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----------------PQTS 341
+PA V+RLA+ HYR + ++ + L EA + +
Sbjct: 284 --EYPAVVVRLALGAVHYRSTVAYSDRTLAEAGAVWDRLAGFVRRAIDAVGEVPAEEVAG 341
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHIL 392
+ + A+ +D+N +A+ +H+ + A +L
Sbjct: 342 IGLAELPDEFVDAMDDDVNVSAALAVIHEHVTAGNNAIAAEEHVEIRQEQALVRAMLDVL 401
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA------------------------ 428
G++ C ++ S + A
Sbjct: 402 GLDPCASPWHEESSAGS--------------DYHEALDSLVHAILNERAAARAAKDWARA 447
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRM 454
D +R L++ G +ED +
Sbjct: 448 DALRDSLQTAGIQVEDSAAGARWKIG 473
>gi|153951726|ref|YP_001398277.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
269.97]
gi|166200142|sp|A7H447|SYC_CAMJD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|152939172|gb|ABS43913.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
269.97]
Length = 462
Score = 293 bits (750), Expect = 4e-77, Method: Composition-based stats.
Identities = 155/483 (32%), Positives = 231/483 (47%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ ++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSATKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLANGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQ------SCQTLEEITEFYIKSYEEDMRTLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYIIAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSSRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKIYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISNANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDATLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLSSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|171912658|ref|ZP_02928128.1| cysteinyl-tRNA synthetase [Verrucomicrobium spinosum DSM 4136]
Length = 520
Score = 293 bits (749), Expect = 5e-77, Method: Composition-based stats.
Identities = 162/484 (33%), Positives = 241/484 (49%), Gaps = 51/484 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++TL R E + +R Y CGPTVY AHIGN R I DV R++
Sbjct: 47 NRLQLHDTLTRTAREVWPSEAGTLRFYGCGPTVYGPAHIGNFRTFIAQDVFRRVVELSG- 105
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+VRNITD+DDK I +++ ++ T T++F D L L P +
Sbjct: 106 -TPTLHVRNITDVDDKTIRDSQKAGQTLL------EFTRYWTERFHADCAALNLLPPHVE 158
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
P+AT+HI I +I+++I HG+AY + + F SS +YG S + E K
Sbjct: 159 PKATDHIAHQIKMIEDLISHGNAYAAPDGSVYFRVSSYADYGKLSHLEDRELKVGAAQTA 218
Query: 178 RVPEKYHKKNPADFILWKRST--PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
++Y K + ADF LWK E WESPWG+GRPGWH+ECSAM+ YLG FD+H
Sbjct: 219 NDSDEYTKDSLADFALWKAHKTDDGENFWESPWGKGRPGWHLECSAMALEYLGVEFDLHS 278
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL+FPHHENEIAQSCCA + A W+H L ++G KMSKS GN T+ +L
Sbjct: 279 GGIDLVFPHHENEIAQSCCATG-GRFARHWMHIAHLMVDGGKMSKSLGNLYTLADL---- 333
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------ 343
G R + V+R +L HYR+P++FT+ L + L K +
Sbjct: 334 --GHRGYSPAVVRYTLLSGHYRQPLNFTLHSLDASHQALLKLAKFEKQLRALTQASEAPS 391
Query: 344 --------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS------- 388
K I + L NDLN AI A+ ++ + ++
Sbjct: 392 LDELKATGKADIFAEAWADLLNDLNVPGAIGAVFATLNKTKPAALSVEAAKSAWIGLHFV 451
Query: 389 AHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
LG+E+ K+ ++ L +R + + ++++D +RKQ+E G+I++D K
Sbjct: 452 LAALGLELPVIKDEGEVEAPEEVKALADQRWNAKQARDWTTSDDLRKQIELLGWIVKDSK 511
Query: 447 NPDN 450
Sbjct: 512 EGYT 515
>gi|219114520|ref|XP_002176430.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402676|gb|EEC42666.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 568
Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats.
Identities = 153/504 (30%), Positives = 223/504 (44%), Gaps = 75/504 (14%)
Query: 5 IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++N+ R F+ + + + MY CGPTVYDFAH+GN R + +DVL R+LRY
Sbjct: 71 LSLFNSKTRAKEPFRPVRADTNVVSMYTCGPTVYDFAHVGNFRAFLTYDVLKRVLRYLGY 130
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT+V N+TD+DDKII+RA ++ + +T + Q F D L
Sbjct: 131 --HVTHVCNLTDVDDKIIQRANEQKID-----HVQTLTRRYEQHFRDDLQALNIQPACQY 183
Query: 123 PRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HI M+ LI+ + AY + F T + P YG+ + ++ T E
Sbjct: 184 PRATEHIDDMMDLIRVLRDKELAYETPDGSWYFRTQAQPRYGTQLVQLNYQEMAQTERGE 243
Query: 182 KYHKKNPADFILWKRST----PMEPGWESP-WGRGRPGWHIECSAMSSHYLG-KVFDIHG 235
K++ ADF LWK M+ WES GRPGWH+ECSAM+ H+ G D+HG
Sbjct: 244 SDDKEHFADFCLWKAFKTGVDRMDAAWESNDIALGRPGWHLECSAMARHFFGDDTIDLHG 303
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL FPHHENEIAQS A N W HNGF+N++ KMSKS GNF+T+ T
Sbjct: 304 GGIDLKFPHHENEIAQSEGATGN-VFCNCWFHNGFVNMDNEKMSKSLGNFLTLRGACPTP 362
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------- 348
R + + YR+ + FT Q +T A +++ +
Sbjct: 363 D------DVRAYRYLAVSSQYRQALAFTPQAMTAARNAIARMDKIKNQLEECTRVNGASV 416
Query: 349 -----------------PAVLSALYNDLNTVSAIQALHKLARES-------TKNHD---- 380
A+ +DL+ A AL L + + K D
Sbjct: 417 VDETTDSELPTVARTALENFEVAICDDLSMPRASAALFSLVKAAEGELKRVNKVSDDEVS 476
Query: 381 --------LLPIFNASAHILGIEVCKEHLNKN---------ISIAIEKLVQERLILLKMK 423
+L + GI + I + +LV+ R + K
Sbjct: 477 LDYTGLRRILDAMKQMDQVFGIFYRVPVSEEEETAQEEALVIPDDVVELVERRTAAKEAK 536
Query: 424 KFSSADYIRKQLESKGFILEDYKN 447
+ AD +R Q+ G+ ++D K
Sbjct: 537 DWELADALRSQVTELGYAVKDVKG 560
>gi|154508503|ref|ZP_02044145.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
17982]
gi|153798137|gb|EDN80557.1| hypothetical protein ACTODO_01004 [Actinomyces odontolyticus ATCC
17982]
Length = 485
Score = 293 bits (749), Expect = 6e-77, Method: Composition-based stats.
Identities = 150/515 (29%), Positives = 235/515 (45%), Gaps = 94/515 (18%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +Y++ ++ + P + +Y+CG TV H+G+ R + FD L R LR E
Sbjct: 1 MLHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN+TDIDDKI+ ++ + + ++F + L +PT++P
Sbjct: 61 --VTYVRNVTDIDDKILHKSAEAGWD------WWAWAYRFEREFTQAYETLGVQSPTYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK-----MGT 177
RAT HIP+ + L+Q +I GHAY + + FD S P+YGS +R+++ + +
Sbjct: 113 RATGHIPEQLDLVQRLIDAGHAYSDGHGNVYFDVHSQPDYGSLTRQRLADMRTTEDDAQI 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
+ K++P DF LWK S P EP W+SPWGRGRPGWH+ECSAMS YLG FDIH
Sbjct: 173 DEVVEAGKRDPRDFALWKVSKPSEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG+DL FPHHENE AQS A + A +W+HN ++ +G KMSKS GN ++I L E
Sbjct: 233 GGGIDLRFPHHENEQAQSHGAG--WEFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE- 289
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------- 344
+PA +R A+ H+R I++ + L A K+
Sbjct: 290 ------EYPAVAVRWALSTVHHRSAIEWGAETLPAAYAAWEKFSTFVARAIEAAGEAPAS 343
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASA 389
+ A ++A+ +DLN A+ LH+ + + +
Sbjct: 344 EIALAPADLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDQAAVYCEQVLVRSML 403
Query: 390 HILGIEVCKEHLN-----------------KNISIAIEKLVQE-------------RLIL 419
+LG++ E + ++ +++E
Sbjct: 404 DVLGLDPASEQWRGQAGIGAGRSGAAAAEHSALDALVQAVLEERAAARAAKDWARA---- 459
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
D +R +L + G + D ++
Sbjct: 460 ---------DELRDRLAAAGVTVADGRDGATWSVG 485
>gi|240146533|ref|ZP_04745134.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
gi|257201344|gb|EEU99628.1| cysteine--tRNA ligase [Roseburia intestinalis L1-82]
gi|291535114|emb|CBL08226.1| cysteinyl-tRNA synthetase [Roseburia intestinalis M50/1]
gi|291539640|emb|CBL12751.1| cysteinyl-tRNA synthetase [Roseburia intestinalis XB6B4]
Length = 471
Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats.
Identities = 158/496 (31%), Positives = 233/496 (46%), Gaps = 69/496 (13%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K + YNTL RK+ + I MY CGPTVY FAHIGN R I+ DVL + LRY
Sbjct: 1 MENKFQFYNTLTRKVETVIPHEDGKIGMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH ++ I T F D
Sbjct: 61 GYD--VKRVMNITDVGHLSSDADTGEDKMLKGAKREHKTV------MEIAKYYTDAFFSD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L P ATN IP+ I++I+ ++ G+AY A + FDTS + +Y FS +
Sbjct: 113 CKKLNIKTPDVVEPATNCIPEFIHMIEVLLEKGYAYVAGGNVYFDTSKLDDYYVFSSQSE 172
Query: 171 DEQKMGTRVPEKY--HKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSH 225
E +G R + +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KELLVGVRDDVEEDVNKKNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCISMK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+LG+ DIH GG+D IFPHH NEIAQS W H LN + KMSKS G+F
Sbjct: 233 HLGEYVDIHCGGVDNIFPHHTNEIAQSESYLG-HTWCKYWFHVQHLNDKSGKMSKSKGDF 291
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK- 344
+T++ L E + + V R+ L +HYR+P++F+ + L K +
Sbjct: 292 LTVSLLQE------KGYDPIVYRMFCLQSHYRKPLEFSYEVLDNMAAAYKKLTKRIAELK 345
Query: 345 ----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
A+ NDLNT AI ++ L ++ + L + N +L +
Sbjct: 346 DEGTVQQDKFDAYKAKFEDAISNDLNTSMAITIIYDLLKDDMNDKTKLALINDFDKVLSL 405
Query: 395 EV------CKEHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLES 437
+ KE ++ + + ++ER IR +L +
Sbjct: 406 NLTTAQADAKEEIDAELESYVLAKIEERKEAKKAKDFAKAD-----------AIRDELLA 454
Query: 438 KGFILEDYKNPDNGQR 453
KG +L+D + +
Sbjct: 455 KGIVLKDTREGVIWHK 470
>gi|57237647|ref|YP_178895.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|121612326|ref|YP_001000491.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005427|ref|ZP_02271185.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|61216114|sp|Q5HUZ0|SYC_CAMJR RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|166200143|sp|A1VZF0|SYC_CAMJJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|57166451|gb|AAW35230.1| cysteinyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|87249406|gb|EAQ72366.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|315058256|gb|ADT72585.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
Length = 462
Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMTQSG------QTLEEITEFYIKSYEEDMRALNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +E+ +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|283954375|ref|ZP_06371896.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
gi|283794174|gb|EFC32922.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
Length = 463
Score = 292 bits (748), Expect = 7e-77, Method: Composition-based stats.
Identities = 156/483 (32%), Positives = 234/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVIKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLANGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ + S+ IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAKSGQSLE------EITEFYIKSYEEDMKALNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYIAAMLDLIKKLAKGEFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKR-ILANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----------------KGII 347
+R +L +HYR ++++ L ++ L K+ + K I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENSKKRLDKFYRLKKRVELSEISDFDVLNNIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L AL +DLN A+ L + D + + A I G
Sbjct: 337 AKQILKALNDDLNISKALALLDDFISNANLELDKESKNKFLKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IE L+ ER K K FS+AD IR+QL SK IL D N
Sbjct: 397 MDTTLYFQWGVSKEEQEEIEGLILERTEAKKNKDFSTADAIREQLSSKKIILLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|157415073|ref|YP_001482329.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81116]
gi|172047114|sp|A8FLL5|SYC_CAMJ8 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|157386037|gb|ABV52352.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81116]
gi|307747715|gb|ADN90985.1| Cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|315932527|gb|EFV11462.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
Length = 462
Score = 292 bits (747), Expect = 9e-77, Method: Composition-based stats.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVAKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLANGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNISKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR++L SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIRERLSSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|86153279|ref|ZP_01071483.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843005|gb|EAQ60216.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 462
Score = 292 bits (747), Expect = 1e-76, Method: Composition-based stats.
Identities = 155/483 (32%), Positives = 232/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFINNANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F+ AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKSKDFNIADTIREQLSSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|323495762|ref|ZP_08100832.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323319229|gb|EGA72170.1| cysteinyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 456
Score = 291 bits (746), Expect = 1e-76, Method: Composition-based stats.
Identities = 145/463 (31%), Positives = 212/463 (45%), Gaps = 37/463 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T+ R+ FQ+I+ + + +Y CGPTVYD+AH GN R + D L R+L +
Sbjct: 6 LSLFDTMARQQRPFQSIENNTVGLYACGPTVYDYAHAGNLRTYLFVDTLRRVLSLNGYQ- 64
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V NITD+ +DK+ + AR++ N + I F+ D +L
Sbjct: 65 -VNHVMNITDVGHLTSDADTGEDKMEKGARKQ------NKSAWEIAQYFEHAFLADLEQL 117
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
L PT RAT HI + I I + G Y+ + + FDTS + YG +R +
Sbjct: 118 NILTPTTICRATEHIQEQIDFIAQLEEKGFTYQTRDGLYFDTSKLAEYGQLARLDKTGLE 177
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
G RV KK DF LWK S E W SPWG G PGWHIECSAM+ YLG+ FD
Sbjct: 178 AGIRVDMAE-KKLATDFALWKFSGEQERQMEWPSPWGVGFPGWHIECSAMAEKYLGEQFD 236
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG D I HH NEIAQ + AN W+H FL L K+SKS + L
Sbjct: 237 IHVGGEDHIPIHHTNEIAQCQAKNGR-IQANYWLHGFFLQLNKEKISKSGTS-------L 288
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------G 345
+ R + R L HYR + FT + L A+ L + T
Sbjct: 289 RLEALIERGFEPLAYRYLTLTGHYRSHLSFTWESLQGAQTALKRLRNKVTKLADGGQIID 348
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI 405
+ DLN A+ L ++ + D I +++ + +
Sbjct: 349 EYQQRFFQLINQDLNMPKALALLWEVLDSGYSSQDKKATALFFDQIFALDINH-VEQEKV 407
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ +L +RL + + K+F+ AD IR+Q+ G+ + D +
Sbjct: 408 PEDVMQLALQRLAMKQQKRFAEADKIREQINQLGYQVADKGDK 450
>gi|226226241|ref|YP_002760347.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
gi|226089432|dbj|BAH37877.1| cysteinyl-tRNA synthetase [Gemmatimonas aurantiaca T-27]
Length = 473
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 153/511 (29%), Positives = 233/511 (45%), Gaps = 92/511 (18%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++YNTL R++ F +D +RMY CGPTVY+ AH+GN R + D+L R++R
Sbjct: 1 MPEFRLYNTLTRRVEPFAPVDGQTVRMYTCGPTVYNPAHLGNFRTFLFEDLLRRVIRLAG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V V N+TD+DDKII +A I +T T F +D L
Sbjct: 61 WQ--VEQVMNLTDVDDKIIRKAAATG------QDILQVTEPFTALFHQDRRYLRIEDAER 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
P+AT H+P+MI L++ ++ +G AY + + F +YG S+ E K G RV
Sbjct: 113 YPKATEHVPEMIELVERLVANGVAYTAEDGSVYFAIDRFADYGKLSQLDKRELKSGARVA 172
Query: 181 EKYH-KKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ + K+N DF LWK + P + W+SPWGRGRPGWH+ECSAM+ YLG+ FD+H
Sbjct: 173 QDEYAKENAQDFALWKSAKPEDEATGAAWDSPWGRGRPGWHLECSAMAMKYLGETFDLHA 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DLIFPHHE+EIAQS A ++ A W H FL +G KM+K GN + EL E
Sbjct: 233 GGIDLIFPHHEDEIAQSEAATG-KQFARCWCHGEFLLTDGAKMAKRIGNVANVVELRE-- 289
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+ V R + HYR+ ++ T L ++ +++ + G
Sbjct: 290 ----QGISGTVYRHFVFNAHYRKQLNLTEDSLEQSRAAVNRIGAFARRLGEATHGTPALV 345
Query: 347 -----IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------------PIF 385
+ +AL+ DLN A+ AL ++ + D+ F
Sbjct: 346 VVAERAEQEFYAALFEDLNAPEALAALFTFISDANRELDIAVAEPAVGDTAALERARTAF 405
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKF-----------------SSA 428
+L + + + + ++A
Sbjct: 406 RLMDSVLDLVPEQLTDGELA------------------DWVEERLAARRAARERRDFAAA 447
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
D IR +L + ++ED G TRW++
Sbjct: 448 DAIRVELTERNILIED------GPAGTRWRR 472
>gi|205356771|ref|ZP_03223530.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345338|gb|EDZ31982.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 462
Score = 291 bits (745), Expect = 1e-76, Method: Composition-based stats.
Identities = 154/483 (31%), Positives = 233/483 (48%), Gaps = 58/483 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLVQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMTQSG------QTLEEITEFYIKSYEEDMRALNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+N +DF+LWK E +E+ +G+GRPGWH EC AM DIH GG+DL+FPH
Sbjct: 168 KRNESDFVLWKF---DENFYENEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFPH 224
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ C + + ANIW+HNGF+ ++G KMSKS N I + L + +
Sbjct: 225 HENEAAQCRCGCKRK-LANIWLHNGFVKIDGEKMSKSLNNSFFIKDAL-------KEFMG 276
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----------------II 347
+R +L +HYR ++++ L A+ L K+ + I
Sbjct: 277 EALRFYLLSSHYRSHFNYSLSDLENAKKRLDKFYRLKKRLDLGEISDFDVLNDIEIKSEI 336
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGI-- 394
+L L +DLN A+ L + D + + A I G
Sbjct: 337 AKQILEILNDDLNVSKALALLDDFISSANLELDKESKNKILKQNIKEALSELAKIFGFGF 396
Query: 395 ----EVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ++K IEKL+ ER K K F++AD IR+QL SK L D N
Sbjct: 397 MDTTLYFQWGVSKEEREEIEKLILERTEAKKNKDFNTADAIREQLNSKKITLLDTPNGTI 456
Query: 451 GQR 453
++
Sbjct: 457 WEK 459
>gi|308271740|emb|CBX28348.1| Cysteinyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 761
Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats.
Identities = 138/478 (28%), Positives = 222/478 (46%), Gaps = 51/478 (10%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K + ++NT+ R F+ I P +Y CGPTV+D H G R + D+L R L +
Sbjct: 303 KINLMLFNTITRSKEPFEPIHPGKASVYSCGPTVHDRMHPGECRRFVFSDLLCRYLEFRG 362
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V ++ NITD+DDK I + + + S T K F +D L +
Sbjct: 363 Y--SVKHIMNITDLDDKTINGSEKAGLEL------SEFTEKYINLFKEDLNLLGIKPAEN 414
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+A+ HI M+ L + ++ G+AYE + FD S +YG S I++ ++G V
Sbjct: 415 YPKASEHIEDMVLLAEKLVKKGYAYEKLRSLYFDISRFSDYGKLSGIDINKIRIGATVDL 474
Query: 182 KYHK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++ NP DF L KR+ E + WG RP WHI+C+AM+ YLG+ FDIH
Sbjct: 475 DEYEKDNPRDFTLMKRAKLSELRRGIYTATDWGNVRPSWHIQCAAMAMKYLGESFDIHTS 534
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
+LIFPHHENEIA S + A W+H + ++G+K+ + G +++L+
Sbjct: 535 SRELIFPHHENEIAISKALTG-KALAKFWMHCDRVLVDGKKLDEIKGRLC-VSDLINM-- 590
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------------- 343
+ IR ++ THYR+PI F+ +RL +A L + +
Sbjct: 591 ----GYSGREIRYWLISTHYRKPIVFSNKRLEDARKSLKRLDTCVHALLDIKAGEPYPEI 646
Query: 344 ---KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
I + A+ +DLN +A+ ++ ++ R+ +L F
Sbjct: 647 DQLLYDIKNGFIGAMDDDLNISAALSSIFRIVRKINVLSRDKKIDPAGAKKILDAFKDID 706
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+L + + N +++L++ER K + +AD IRK+LES G + D K
Sbjct: 707 SVLNVF---DFGNCYFDPEVKRLLEERDRARTEKNWGAADDIRKKLESMGVAIRDRKT 761
>gi|296128532|ref|YP_003635782.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
gi|296020347|gb|ADG73583.1| cysteinyl-tRNA synthetase [Cellulomonas flavigena DSM 20109]
Length = 481
Score = 291 bits (744), Expect = 2e-76, Method: Composition-based stats.
Identities = 151/499 (30%), Positives = 222/499 (44%), Gaps = 80/499 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T + + +F + + +Y+CG TV H+G+ R + FDVL R LR
Sbjct: 1 MSLRLFDTGTQSVRDFVPLVEGEVGVYLCGATVQSPPHVGHVRSAVAFDVLVRWLRRSG- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VT VRN+TDIDDKI+ +A +N + F L L P ++
Sbjct: 60 -ARVTMVRNVTDIDDKILAKAAAAG------RPWWAWALQNERAFASAYAALGVLPPDYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT H+P M+ L+ ++ GHAY A ++ FD S YG+ + +++D+
Sbjct: 113 PRATGHVPAMLELMDRLVERGHAYAAGPGDVYFDVRSWAEYGALTNQRVDDM-TDVPEDA 171
Query: 182 KYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK P EPG W++ +GRGRPGWH+ECSAM+ YLG+ FDIHGGGL
Sbjct: 172 GSGKRDPHDFALWKAPKPGEPGTAAWQTRYGRGRPGWHLECSAMAHRYLGESFDIHGGGL 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE AQS A A W+HNG++ G KMSKS GN + + +LE
Sbjct: 232 DLRFPHHENEQAQSRAAGYG--FARYWLHNGWVTQGGAKMSKSLGNGLLVTTVLEKA--- 286
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
PA V+R A+ YR +++T L EA +
Sbjct: 287 ----PAVVVRYALTAVQYRSMLEWTDDTLAEAAATWDRLAGFVQRATERVGTASDDEVAG 342
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASAHILGIE 395
+ A +AL +DLN +A+ +H+ R +LG++
Sbjct: 343 VELPAAFAAALDDDLNVPAALAVVHETLRAGNSALAAGDDAAARAAMVTLRGMLDVLGLD 402
Query: 396 VCKEHLNKNISI-----AIEKLVQERLILLKMKKFSSA-----------------DYIRK 433
A++ LV A D IR
Sbjct: 403 PGSAQWRTAGGDGRHAHALDALV-------------RAELDARSAARAARDWATADAIRD 449
Query: 434 QLESKGFILEDYKNPDNGQ 452
+L + G ++ED
Sbjct: 450 RLTAAGVVVEDSPTGARWT 468
>gi|224436533|ref|ZP_03657542.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
gi|313143036|ref|ZP_07805229.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
gi|313128067|gb|EFR45684.1| cysteinyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
Length = 504
Score = 290 bits (743), Expect = 2e-76, Method: Composition-based stats.
Identities = 154/520 (29%), Positives = 247/520 (47%), Gaps = 87/520 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I ++++++++ +F+ I P +R+YVCGPTVYD AH+G+AR I FD+ RL + +
Sbjct: 1 MITLFDSIKKQKLKFEPISPKQVRIYVCGPTVYDDAHLGHARSSIAFDLWRRLF--LFLD 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + +N TDIDDKII+++ Q S+ ++ + + ++ D L L P +P
Sbjct: 59 FKVIFAKNFTDIDDKIIKKSLQNGISVE------EVSERYIELYLNDMHALGILRPDLEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+AT+++PQM +I+ ++ G+AY+ NN++ + YGS S+R EQ +R+
Sbjct: 113 KATSNLPQMHEMIEQLLQKGYAYKGENNDVYLSIAKDKAYGSLSQRTTHEQNQ-SRITNA 171
Query: 183 YHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF---------- 231
K+ +DF LWK + ++SP+G+GRPGWHIECSAM +L
Sbjct: 172 NDKQEESDFALWKGYKGEDDIAYDSPFGKGRPGWHIECSAMIEKHLAYDMREKQEYEKQE 231
Query: 232 ---DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG DL+FPHHENE +Q+ CA E A W+HNGF+N+ G KMSKS GN I
Sbjct: 232 FAIDIHAGGADLLFPHHENEASQTRCATGRE-LAKYWLHNGFVNINGEKMSKSLGNSFFI 290
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP---------- 338
+ L + + ++R +L HYR ++F + L +++ L K
Sbjct: 291 KDAL-------KVYDGEILRNYLLGVHYRLALNFNEEDLLQSKKRLDKIYRLKKRIMAER 343
Query: 339 ----------------------------QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
T ++ +L AL +D N A+ + +
Sbjct: 344 IADSIPQTKALDSTELADQLESLNTLKTHTKNAQDSFIKPLLEALSDDYNISKALSIIEE 403
Query: 371 LARESTKNHDLLPIFNA-----------SAHILGI------EVCKEHLNKNISIAIEKLV 413
+ S D P A ++LG+ + L + IE +
Sbjct: 404 MLSISNDYLDKNPKDKAYKLAISGNLACIEYLLGLGDKDPTLYFQLGLTEQERQDIESKL 463
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
Q R K K + AD IR +L+S+G + D ++
Sbjct: 464 QARTEAKKQKNYVLADSIRDELKSQGIEIMDTPQGSTWEK 503
>gi|313126857|ref|YP_004037127.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
gi|312293222|gb|ADQ67682.1| cysteinyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
Length = 495
Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats.
Identities = 146/505 (28%), Positives = 225/505 (44%), Gaps = 71/505 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + EF+ D ++ +YVCG TV D AH+G+AR + DV++R L +
Sbjct: 1 MTLSVTNTLTGEREEFEPQDDDDVLLYVCGLTVSDDAHLGHARLWMHADVMHRWLEHEGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+++KI R + + + T ++D L
Sbjct: 61 --TVHHVENFTDVNEKIAAR----IGDDELGQSEPDVARHFTDHVIRDMRGLNLKRAEVY 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+PQ+I LI+ + +G+AYE+N + FD ++ +YG S +KI+E + E+
Sbjct: 115 PRVSEHVPQIIDLIETLTENGYAYESNGSVYFDVTAFEDYGKLSNQKIEEMEAQGEADER 174
Query: 183 YHKKNPADFILWKR-------------------STPMEPGWESPWGRGRPGWHIECSAMS 223
K++PADF LWK WESPWG GRPGWHIECSAMS
Sbjct: 175 AEKRHPADFALWKAGAVSPDAVAEHRPEELDPIEDACGETWESPWGEGRPGWHIECSAMS 234
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+LG DIH GG DL+FPHHENE+AQS A + A W+H G L +E KMS S G
Sbjct: 235 MTHLGDTIDIHVGGRDLVFPHHENEVAQSEAATG-QTFARYWLHVGLLQMEDDKMSSSLG 293
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
NF T+++ L+ + VIR L T Y F+ + EAE + + +
Sbjct: 294 NFFTVSDALD-------EFGVDVIRTFYLSTGYGAEQTFSDSAMAEAEERWDRLERAYET 346
Query: 344 K----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--- 378
A+ +D N A+ AL +LAR +
Sbjct: 347 AIEACDSPDAYASVEDADLREAIETTQTDFQKAMNDDFNVREAMAALIELARAVNTHVND 406
Query: 379 ---------HDLLPIFNAS-AHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKF 425
+ + F + G+ ++ + L+ R + +
Sbjct: 407 ADEYDYRGLREAIETFEDLGGDVFGLSFGDAADGGDVEIAEDLVSLLLNVREAEREAGNY 466
Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
AD +R +L++ G + D ++ +
Sbjct: 467 ERADELRDELDALGVEVHDSEDGPS 491
>gi|269929418|ref|YP_003321739.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
gi|269788775|gb|ACZ40917.1| cysteinyl-tRNA synthetase [Sphaerobacter thermophilus DSM 20745]
Length = 399
Score = 290 bits (742), Expect = 3e-76, Method: Composition-based stats.
Identities = 141/411 (34%), Positives = 211/411 (51%), Gaps = 35/411 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L ++ EF ++ +RMYVCG T YD H+G+A + FDV+ R ++
Sbjct: 1 MRLYNSLTQRKEEFTPLNGKTVRMYVCGITPYDTTHMGHAMTYLTFDVINRYCQHLGW-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TDIDD I+ +AR+ + + + + +QF +D + L P+ PR
Sbjct: 59 RVKYVQNVTDIDDDILRKARE------VGEPWDRLGDRYIRQFQEDLNSINILPPSVYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
A+ IP +I +I ++ G AY + + F +S P+YG R +E P
Sbjct: 113 ASEEIPTIIEMISTLVERGMAYVRDGNVYFRVASDPDYGHLCRCSTEEMIALSAERGADP 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DFILW+ P EP W+SPWG GRPGWHIECSAM+ YLG DIHGGG DL
Sbjct: 173 NDPRKENPLDFILWQAQQPGEPAWDSPWGPGRPGWHIECSAMAYRYLGPQIDIHGGGGDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
I+PHHE+EIAQ+ + E A W+H + +G KMSKS GN + + ++L R
Sbjct: 233 IYPHHESEIAQTEAYTQKEPFARFWVHVAMVRYQGEKMSKSLGNLVLVRDVL-------R 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAV 351
A +RL +L HYRE ++ E L + G A
Sbjct: 286 DHTADALRLYLLSNHYRESFEYQDDGPARFEPLADLLRRAVRLPGGSGPALDVADTHRAF 345
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNH-------DLLPIFNASAHILGIE 395
A+ +DL+T + IQ L ++ + + + +A ILG++
Sbjct: 346 TDAIGDDLDTPTGIQVLREMGEQVISAAEAGRDVTEARELLRQAAGILGLQ 396
>gi|295394484|ref|ZP_06804707.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
gi|294972663|gb|EFG48515.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
Length = 456
Score = 290 bits (741), Expect = 4e-76, Method: Composition-based stats.
Identities = 156/466 (33%), Positives = 226/466 (48%), Gaps = 66/466 (14%)
Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
CG TV HIG+ R +VFD L R + Y + VT VRN+TDIDDKI+ ++ E
Sbjct: 2 CGATVQGAPHIGHMRSAVVFDQLRRWMTYRNFD--VTLVRNVTDIDDKILSKSVDEG--- 56
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN- 149
Q F + R+ PT++PRAT HIP+MI LI +I GHAY A
Sbjct: 57 ---RPWWAHAFLYEQVFTEAYDRIGVAPPTYEPRATGHIPEMIELIARLIEAGHAYPAQD 113
Query: 150 --NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GW 204
++ FDT+S P YGS +R+ + P + K++P DF +WK +P W
Sbjct: 114 GSGDVYFDTASWPEYGSLTRQDRGSMEDAADAPVR-GKRDPRDFAVWKGRKDADPVTASW 172
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
++PWGRGRPGWHIECSAMS+ YLG FDIHGGG DL FPHHENE+AQS A + AN+
Sbjct: 173 DTPWGRGRPGWHIECSAMSTKYLGAQFDIHGGGRDLRFPHHENEMAQSNAAG--DPFANL 230
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
W+H+G ++++G KMSKS GN I ++L + + ++R + HYR ++FT
Sbjct: 231 WMHSGLVSVDGNKMSKSLGNSIFAHDLFD-------EYSPLLVRFFLTSGHYRSQLEFTR 283
Query: 325 QRLTEAEILLSKWPQTSTSK--------------------GIIDPAVLSALYNDLNTVSA 364
+ + + +++ T G + P A+ +DL+T A
Sbjct: 284 DNVAQQQAAVTRITNFLTRARTELGDTAPAVVSFESGYEGGHVAPEFAEAMDDDLSTPRA 343
Query: 365 IQALHKLARESTKNHDL------------LPIFNASAHILGIEVCKEHLNK--------- 403
+ + + K + L LGI +
Sbjct: 344 LAVVFDYVSKGYKLLEAGGSANREELAHTLVAVETMLDTLGINPTSLQWAETASGSDSAT 403
Query: 404 -NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + + +L RL K K F++AD IR QL G ++ED +
Sbjct: 404 QALDVLVSELANRRLEAKKAKDFANADAIRDQLTQAGIVIEDTADG 449
>gi|326386996|ref|ZP_08208606.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
gi|326208177|gb|EGD58984.1| cysteinyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
Length = 485
Score = 290 bits (741), Expect = 5e-76, Method: Composition-based stats.
Identities = 139/497 (27%), Positives = 211/497 (42%), Gaps = 59/497 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + ++N+L R+ FQ + P R+Y CGPTVY++ HIGN R + DVL R L Y
Sbjct: 5 RPLVLFNSLTRQSEPFQPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADVLGRTLTYKGY 64
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+T+V NITD+ +DK+ + A Q +I I TQ + D
Sbjct: 65 --KLTHVINITDVGHLTDDADDGEDKMEKAAAQ------GAQSIWDIARHYTQAYWADIA 116
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L P AT++IPQMI + I H YE + FD S+ +YG +R +E
Sbjct: 117 ALNIRQPAQWSIATDYIPQMIAFAEKIADK-HCYELPTGLYFDVGSVADYGRLARATTEE 175
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ R+ + K++ ADF +W+++ P E W+SPWGRG PGWH+ECS MS LG
Sbjct: 176 GE--GRIEDVEGKRHKADFAIWRKTPPGEKRQMEWDSPWGRGAPGWHLECSVMSGALLGF 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSC---CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
FDIH GG+D HH NEIAQ+ CA + AN + +S
Sbjct: 234 PFDIHTGGIDHREIHHPNEIAQNQAFRCAGSLTDPAN--SGARMWLHNNFLVERSGKMSK 291
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+ E L + R + R+ L HYR ++F+ + L A L +
Sbjct: 292 SSGEFLRLQLLIDRGYHPLAYRMMCLQAHYRSELEFSWEGLGAALTRLKRLVMAVGQLKE 351
Query: 347 ID---------------PAVLSALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAH 390
+A+ DLNT A+ L ++ + + L
Sbjct: 352 RAAEPAAAPGPKFADALDRFDAAMSEDLNTPVALTVLDEIVGMKKVDPAEKLAAIALVDS 411
Query: 391 ILGIEV---------CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+LG ++ + AI +++ R K F+ +D +R +L + G
Sbjct: 412 VLGFDLLTLDRAALRLRPRTATIDEAAIAEVLDARRAARADKDFARSDALRDELAAAGVD 471
Query: 442 LEDYKNPDNGQRMTRWK 458
+ D WK
Sbjct: 472 VMD-----GDPLGWDWK 483
>gi|225377341|ref|ZP_03754562.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
16841]
gi|225210872|gb|EEG93226.1| hypothetical protein ROSEINA2194_02988 [Roseburia inulinivorans DSM
16841]
Length = 473
Score = 289 bits (740), Expect = 5e-76, Method: Composition-based stats.
Identities = 154/497 (30%), Positives = 228/497 (45%), Gaps = 70/497 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K YNTL +KI + I MY CGPTVY FAHIGN R I+ DVL + LRY
Sbjct: 1 MENNFKFYNTLTKKIETVIPHEDGKIAMYTCGPTVYHFAHIGNLRSYIMEDVLEKSLRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH ++ I T F +D
Sbjct: 61 GYD--VKRVMNITDVGHLASDADTGEDKMLKGAKREHKTV------MEIAKFYTDAFFED 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L P ATN IP+ I +I+ ++ G+AY+A + FDTS + NY FS +
Sbjct: 113 CKKLNIKTPDVVEPATNCIPEFIKMIEGLLEKGYAYQAGGNVYFDTSKLDNYYVFSTQAE 172
Query: 171 DEQKMGTRVPEKYHKKNPA--DFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSH 225
E +G R DF+LW + E W+SPWG G PGWHIECS +
Sbjct: 173 LETLVGVRDDVDEDTNKKNKTDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSCIGIK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+LG+ DIH GG+D IFPHH NEIAQS K N W H LN + KMSKS G+F
Sbjct: 233 HLGEYMDIHCGGVDNIFPHHTNEIAQSESYLG-HKWCNYWFHVQHLNDKSGKMSKSKGDF 291
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
+T++ L E + + V R+ L +HYR+P++F+ + + + +K
Sbjct: 292 LTVSLLQE------KGYDPIVYRMFCLQSHYRKPLEFSYEIMDNTKAAYNKLVKRVAGLK 345
Query: 338 ---PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ A+ NDLNT AI L+ L + T + + +L +
Sbjct: 346 KEGETDQNVFAEYKAKFVDAISNDLNTSMAITVLYDLLKADTNDITKYELIKDFDKVLSL 405
Query: 395 EVCK-------EHLNKNISIAIEKLVQER-----------LILLKMKKFSSADYIRKQLE 436
+ E ++ + + ++ER IR +L
Sbjct: 406 NLENAKSTETTEGVDAELESFVLAKIEERKEAKKAKDFAKAD-----------AIRDELL 454
Query: 437 SKGFILEDYKNPDNGQR 453
+KG +++D + +
Sbjct: 455 AKGIVIKDTREGVVWHK 471
>gi|213865169|ref|ZP_03387288.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 283
Score = 289 bits (740), Expect = 6e-76, Method: Composition-based stats.
Identities = 138/291 (47%), Positives = 184/291 (63%), Gaps = 10/291 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVDVV 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+F
Sbjct: 173 DVKRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
PHHENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L+
Sbjct: 233 PHHENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVLK 282
>gi|149186074|ref|ZP_01864388.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
gi|148830105|gb|EDL48542.1| cysteinyl-tRNA synthetase [Erythrobacter sp. SD-21]
Length = 482
Score = 289 bits (739), Expect = 8e-76, Method: Composition-based stats.
Identities = 133/490 (27%), Positives = 212/490 (43%), Gaps = 45/490 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +K++N+L R++ F + P R+Y CGPTVY++ HIGN R + DVL R L +
Sbjct: 3 ETPLKLFNSLTREVETFTPVHPGEARVYTCGPTVYNYPHIGNMRAYVFADVLGRTLSWKG 62
Query: 62 GEKCVTYVRNITDI----DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
+ T++ NITD+ DD + E + +I I T+ + D L
Sbjct: 63 YDL--THIINITDVGHLTDDADEGEDKMEKMAAEKAQSIWDIAKHYTEAYWADVKALNIR 120
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
P AT++I +MI + I H YE + + FD S+I +YG +R ++ +
Sbjct: 121 QPAKWSVATHYIDEMIEFAKGIADK-HCYELESGLYFDVSTIEDYGKLARAVTEDGE--G 177
Query: 178 RVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
R+ K+N ADF +W+++ E W+SPWG+G PGWH+ECS M LG FDIH
Sbjct: 178 RIDTVEGKRNAADFAIWRKTPAGETRQMEWDSPWGKGAPGWHLECSVMGGKLLGFPFDIH 237
Query: 235 GGGLDLIFPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
GG+D HH NEIAQ CC + ++ N + +S + E
Sbjct: 238 TGGIDHREIHHPNEIAQNQAHCCTNGLDVAEN--SGARIWMHNNFLVERSGKMSKSAGEF 295
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------P 338
L + + + R+ L HYR ++F+ + L A L +
Sbjct: 296 LRLQLLIDKGYHPLAYRMMCLQAHYRSELEFSWEGLQAALTRLKRIVMQVERLEDDLAGD 355
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILGIEVC 397
+ + +A+ +DLNT A+ AL + LA + + +LG+ +
Sbjct: 356 PSHQKFAPMREKFAAAISDDLNTSVALVALEEALAVKKVDGSVKRAVVEDMDRVLGLNLF 415
Query: 398 K---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ K IE + R K ++++D IR L +KG + D
Sbjct: 416 DLTRENLRIRPKVAKISESEIEAEILRRKEAKVAKDYANSDAIRASLAAKGVEVMDGD-- 473
Query: 449 DNGQRMTRWK 458
WK
Sbjct: 474 ---PLGWEWK 480
>gi|149920369|ref|ZP_01908839.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
gi|149818811|gb|EDM78253.1| cysteinyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
Length = 537
Score = 288 bits (738), Expect = 1e-75, Method: Composition-based stats.
Identities = 148/537 (27%), Positives = 210/537 (39%), Gaps = 105/537 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNT ++ F + P +R+Y CG TVY HIG+AR +DV R L Y
Sbjct: 16 LHVYNTRTKRKEAFVSAQPRVVRIYTCGLTVYSDMHIGHARTYCFWDVFRRWLEYRGY-- 73
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V N TDIDD+II+ AR++ + + F +D L R
Sbjct: 74 HVISVINYTDIDDRIIKDAREKGEGTL------DLAERVVASFRRDCRALKIKDYAVYTR 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-- 182
AT+ + + I ++ ++ GHAY E+++D S YG S R ++ + G
Sbjct: 128 ATDFVEEQIAAVKALVDKGHAYVVEGEVLYDVRSFERYGQLSGRSLEGMQEGASGRTDSA 187
Query: 183 --YHKKNPADFILWKRSTPMEPGWES---PWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
K+ ADF LWK S EP W++ W GRPGWHIECSAMS+ LGK FD+HGGG
Sbjct: 188 ETSRKRFFADFTLWKPSKEGEPCWQTGEAEWPSGRPGWHIECSAMSTTTLGKNFDVHGGG 247
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-----RKMSKSNGNFITINELL 292
+D +FPHHENE+AQS N W+H L L KMSKS GN I+I +L+
Sbjct: 248 IDNLFPHHENEVAQSEPLCG-HPWVNYWMHPAHLQLLNEEGQPIKMSKSLGNVISIGDLV 306
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ 346
R +THYR + F Q L EA K +
Sbjct: 307 A-------KHGPDAARWYFGVTHYRSSLAFNWQLLDEATKGFDKVRRAVKMIADRLAEVD 359
Query: 347 ----------------------------------------IDPAVLSALYNDLNTVSAIQ 366
++A+ +D+ T A
Sbjct: 360 DAELRVPTVGTYAGLREGDAAVPRERQSFGHGALGEINARFMDRFIAAMDDDMGTPKATA 419
Query: 367 ALHKLARESTKNHDLLPI-------------FNASAHILGIEVCKEHL------------ 401
A+ E +LG+E E L
Sbjct: 420 AVFDYVNELFAAGIETNEALDAASLLAAYRCLTRHLWVLGVEFPDERLFPELAADCFAVA 479
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ A++K++ R K + F+ AD IR L G +ED
Sbjct: 480 SGDSAREEALAGAVDKMLLLRQQARKDRDFAKADLIRDLLTEAGVSVEDTPKGPRWT 536
>gi|15639085|ref|NP_218531.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189025325|ref|YP_001933097.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|6094392|sp|O83129|SYC_TREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|226735067|sp|B2S239|SYC_TREPS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|3322350|gb|AAC65085.1| cysteinyl-tRNA synthetase (cysS) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189017900|gb|ACD70518.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|291059509|gb|ADD72244.1| cysteinyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 520
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 143/534 (26%), Positives = 225/534 (42%), Gaps = 92/534 (17%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNTL R+ FQ + ++R+Y CGPTVY++ H+GN R + D + R L +
Sbjct: 1 MALRVYNTLTRQQEHFQPWEHGHVRLYGCGPTVYNYPHLGNLRAYVFQDTVRRTLHFLGY 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
VTYV NITD+ +DK++ A+ S+ + + F +DT
Sbjct: 61 --RVTYVMNITDVGHLESDADSGEDKLVRSAQAHGHSVL------QVAAHYRAAFFRDTA 112
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L P+ A++ I MI I+ ++ GHAY A + FD S P+Y SF +++
Sbjct: 113 LLGIEEPSIVCNASDCIQDMIAFIEQLLARGHAYCAGGNVYFDVRSFPSYESFGSAAVED 172
Query: 173 QK-----MGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRPGWHIECSAMSS 224
+ RV HK++ DF+LW + W+SPWGRG PGWHI CSAMS
Sbjct: 173 VQEGEDAARARVAHDTHKRDARDFVLWFTRSKFVRHALTWDSPWGRGYPGWHIGCSAMSM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK------- 277
+LG DIH GG+D I HH NE AQ W+H+ FL ++ +K
Sbjct: 233 KFLGPRCDIHIGGVDHIRVHHRNERAQCEAITGA-PWVRYWLHHEFLLMQLQKRAVHADM 291
Query: 278 ----MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+S + + + L R + R +L YR + F+ L A
Sbjct: 292 GSSVVSSFSKMSKSCGQFLTLSSLQERGFQPADFRFFLLSGQYRTQLAFSWDALKTARAA 351
Query: 334 LSKW-------------------------------PQTSTSKGIIDPAVLSALYNDLNTV 362
+ ++ ++ +AL +D +T
Sbjct: 352 RRSFVRRVARVVDAARATTGSVRGTSAECAAERVCESRASESELLLTDFRAALEDDFSTP 411
Query: 363 SAIQALHKLARESTKNHDL-LPIFNASAHILGIEVCKEHLNKN----------------I 405
A+ AL KL R+++ L + + +LG+ + +E
Sbjct: 412 RALSALQKLVRDTSVPPSLCVSALQVADTVLGLGIIQEATASLSAQVPAGDTLPQRPLPS 471
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I +LV+ R + + F AD IR+QL+++G LED T WK+
Sbjct: 472 EEWIGQLVRARAHARQTRDFPRADEIRRQLKAEGIELEDT------HLGTIWKR 519
>gi|27262230|gb|AAN87396.1| Cysteinyl-tRNA synthetase [Heliobacillus mobilis]
Length = 454
Score = 287 bits (735), Expect = 2e-75, Method: Composition-based stats.
Identities = 143/438 (32%), Positives = 209/438 (47%), Gaps = 58/438 (13%)
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V Y++N TDIDDKII RA + + + + ++ +++ +D L T
Sbjct: 30 YRYEVDYIQNFTDIDDKIINRANE------VGEDPIQLAARFVEEYFQDAKALNVRPATV 83
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+ + H+ +I +I+ + GHAYE ++ F S +YG S R ++ + G RV
Sbjct: 84 HPKVSTHMGDIIAMIRRLEEKGHAYEMEGDVYFSIPSFKDYGKLSGRSQEDMQAGARVEV 143
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF LWK+ P EP W+SPWG+GRPGWHIECSAMS YLG FDIHGGG DLI
Sbjct: 144 DERKRHPMDFALWKKVKPGEPSWDSPWGKGRPGWHIECSAMSQKYLGDTFDIHGGGQDLI 203
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A W+HNGF+ + KMSKS GNF T+ ++L +
Sbjct: 204 FPHHENEIAQSEACTSTAPMARYWLHNGFITVNQEKMSKSLGNFFTLRQIL-------KK 256
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------- 347
+ V+R +L THYR P+DF +L A+ L +
Sbjct: 257 FSGDVVRFYLLSTHYRSPLDFDDTKLEAAQKGLQRLRTGRRLLEEALKDSARQSGNNRPA 316
Query: 348 -------------DPAVLSALYNDLNTVSAIQALHKLARESTK---------NHDL---- 381
A+ +D NT A+ L LARE+ DL
Sbjct: 317 AQREKLADQWTKTKNDFREAMDDDFNTALALSLLFDLARETNAFLHGGEGLGAEDLQLLR 376
Query: 382 --LPIFNASAHILGIEV---CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
F+ + ++GIE+ + + + ++ L+ R K K +++AD IR L+
Sbjct: 377 HVAETFDQLSGVMGIELSETAEAADDSLVDGLMDLLISLRAEARKKKDWATADKIRDGLK 436
Query: 437 SKGFILEDYKNPDNGQRM 454
I+ED ++
Sbjct: 437 ELAIIIEDTPQGARWKKG 454
>gi|293400415|ref|ZP_06644561.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306815|gb|EFE48058.1| cysteine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 439
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 156/460 (33%), Positives = 226/460 (49%), Gaps = 50/460 (10%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ + I EF+ I + MYVCGPTVY++ HIGNARP++VFD L R + V V
Sbjct: 1 MNQTIEEFKPIHEHEVNMYVCGPTVYNYPHIGNARPIVVFDTLKRTFQALGY--KVKMVS 58
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD+DDKII+ A++ S IT K + + D L + P PR T +
Sbjct: 59 NYTDVDDKIIKVAKECGVSE------KEITEKFIKAYNDDRLALHAMMPDAAPRVTETMD 112
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+I I+ ++ GHAYE + ++ F +S+ +YG S ++ID+ +G R+ E K+NP D
Sbjct: 113 AIIAFIELLVKKGHAYEIDGDVYFRVNSVESYGKLSNQQIDDLMVGARIDENSKKENPLD 172
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH--YLGKVFDIHGGGLDLIFPHHENE 248
F LWKR T W SPW GRPGWH EC M + + DIHGGG+DL FPHHENE
Sbjct: 173 FTLWKR-TDEGIQWNSPWSVGRPGWHTECVVMINKEFHGEHTIDIHGGGMDLKFPHHENE 231
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
IAQS A AN WIHNG +N++G KMSKS GN I +++E V+R
Sbjct: 232 IAQSRAAYET-PIANYWIHNGMVNIDGEKMSKSLGNVIWAKDMIE-------KIGGNVLR 283
Query: 309 LAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSKGIID------------PAVL 352
L HYR P++ + + E + + + Q + D +
Sbjct: 284 WVFLSAHYRSPLNINEEAIETAKKELQKVQTSLKQAYVKLALADVEITDEAEDTLLTPFM 343
Query: 353 SALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHL 401
A+ +D+NT +A AL + + + ++ +LGIE + L
Sbjct: 344 DAMQDDMNTPNAFAALFETVKVLNQTIRQREVDLAFLQRIVKTVETMLDVLGIENNRLIL 403
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ L + +K K F++AD R +L KG +
Sbjct: 404 SDEDKE----LHHKWKAAVKEKDFATADDYRARLIEKGIL 439
>gi|148927563|ref|ZP_01811041.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
gi|147887091|gb|EDK72581.1| cysteinyl-tRNA synthetase [candidate division TM7 genomosp. GTL1]
Length = 484
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 152/498 (30%), Positives = 225/498 (45%), Gaps = 67/498 (13%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT RK+ EF ++P + +Y CGPTVYD+ +GN I +D L R LR
Sbjct: 1 MLTLYNTPHRKLEEFTPVEPGKVSVYTCGPTVYDYLTVGNWIAYIRWDTLVRTLRANG-- 58
Query: 64 KCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
VT+ NITD+ +DK+ + AR+E + I + T F++ +
Sbjct: 59 LAVTHAMNITDVGHLTSDEDHGEDKMQKGARREGKTA------WDIAAFYTNDFLEGMKQ 112
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
L L P H P+AT +IPQ + L++ + G Y+ ++ I FDTS P Y F+ +D
Sbjct: 113 LNLLTPEHIPKATEYIPQQLELVRALKQKGFTYQIDDGIYFDTSKFPRYAQFAHLDLDAL 172
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWG--------RGRPGWHIECSAM 222
K G RV K++P+DF LWK + P E W++P +G PGWH+ECSAM
Sbjct: 173 KAGARVEHNAKKRSPSDFALWKFTQPGEIRDMEWDTPIDLLDEGEPRKGFPGWHLECSAM 232
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
+ G DIH GG+D I HH NEIAQS A + A WIH + +G K+SKS
Sbjct: 233 AMDIFGPTLDIHAGGIDHIPVHHTNEIAQSEAATD-KLFARYWIHCNHIKADGTKISKSL 291
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ--------RLTEAEILL 334
GN T+ +L R + R L +HYR +FT + R EI
Sbjct: 292 GNGYTLQDL------ATRDFSPLDYRTFALQSHYRTEGNFTWENLEGAKNRRAHWREIAA 345
Query: 335 SKWPQTSTSKGIIDPAVLSAL--------------YNDLNTVSAIQALHKLARESTKNH- 379
+W T + +DLNT A+Q + ++ E K+
Sbjct: 346 LRWQTYDTLVDDSEKTTDERTVQLINARQEILLALNDDLNTPLALQIIDEVFSELEKHRP 405
Query: 380 ------DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
L + +LGI++ +IS ++L+ ER + K F +D +R
Sbjct: 406 VDIQQSALEDLLTFIDDVLGIKLLDS--TPDISDEAKQLILERQQAREAKDFKKSDELRD 463
Query: 434 QLESKGFILEDYKNPDNG 451
L L D ++
Sbjct: 464 TLLKHNIGLRDTQSGTLW 481
>gi|291524578|emb|CBK90165.1| cysteinyl-tRNA synthetase [Eubacterium rectale DSM 17629]
Length = 475
Score = 287 bits (734), Expect = 3e-75, Method: Composition-based stats.
Identities = 160/488 (32%), Positives = 229/488 (46%), Gaps = 51/488 (10%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K YNTL R+I I MY CGPTVY FAHIGN R I+ DVL + LRY
Sbjct: 1 MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH S+ + + T F KD
Sbjct: 61 GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
T + P ATN IP+ I++++ +I G+AY A + FDTS + +Y FS
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172
Query: 171 DEQKM---GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
EQ V E +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG+ DIH GG+D IFPHH NEIAQS W H LN KMSKS G
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGA 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+T++ L E + + R L +HYR+P++F+ L A +K +
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345
Query: 345 -----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
A+ NDLNT AI ++ + + + L + + +L
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405
Query: 394 IEVCK---------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ + + + + I + ER K K F++AD IR +L +KG ++D
Sbjct: 406 LGLRESGKALLEASSSADSELEAFINDKITERAAAKKAKDFATADAIRDELLAKGVAIKD 465
Query: 445 YKNPDNGQ 452
+ +
Sbjct: 466 TREGVKWE 473
>gi|332186293|ref|ZP_08388038.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
gi|332013661|gb|EGI55721.1| cysteinyl-tRNA synthetase [Sphingomonas sp. S17]
Length = 485
Score = 286 bits (733), Expect = 3e-75, Method: Composition-based stats.
Identities = 162/496 (32%), Positives = 233/496 (46%), Gaps = 64/496 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +YN+L R + FQ IDP+N+R+Y CGPTVY++AHIGN R + D L R+LR+
Sbjct: 9 NLPLTLYNSLTRALETFQPIDPANVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLRWKG 68
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+T++ NITD+ DDK+ A++ I I + T F ++
Sbjct: 69 W--PLTHIINITDVGHLTSDADAGDDKMEAAAKKSGQD------IWSIAAHYTTAFKQNL 120
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
L APT P AT H+PQMI + I H Y + + FD +++P+YG +R + D
Sbjct: 121 KDLGIAAPTRFPLATEHVPQMIEFAKAIEAK-HCYRLPDGLYFDVTTVPDYGRLARHQDD 179
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLG 228
E + R+ K++PADF +W+ S P E W+SPWG G PGWH+ECS MS YLG
Sbjct: 180 EGES--RIDPVAGKRHPADFAIWRSSAPGENRQMEWDSPWGPGAPGWHLECSVMSKQYLG 237
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRI--EKTANIWIHNGFLNLEGRKMSKSNGNFI 286
+ FDIH GG+D HH NEIAQ+ A ANIW+HN FL KMSKS+G F+
Sbjct: 238 EQFDIHTGGIDHREIHHPNEIAQNQ-AHGCTANTGANIWMHNNFLVDRTGKMSKSSGEFL 296
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---- 342
T+ L++ R + RL L HYR ++F L A++ L + QT
Sbjct: 297 TLQALMD------RGFHPLAYRLMCLQAHYRSEMEFGWDGLAAAQVRLKRLVQTVEGLRS 350
Query: 343 --------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--- 391
+ +AL +DL T A+ L ++ + ++ D+ A A
Sbjct: 351 RADAASKGDATPYRERLDAALSDDLATPRALPVLDEMLGDKKQSSDVR--LAALADFDAT 408
Query: 392 ---------LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ IE + ER K F+ +D IR L + G +
Sbjct: 409 LGLQLTTLTRADLRTRPKTATVDEATIEAQLAERRAARAEKDFAKSDMIRDSLLAAGVEV 468
Query: 443 EDYKNPDNGQRMTRWK 458
D WK
Sbjct: 469 MDGD-----PLGWDWK 479
>gi|215447914|ref|ZP_03434666.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
gi|289759738|ref|ZP_06519116.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
gi|289715302|gb|EFD79314.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
Length = 428
Score = 286 bits (732), Expect = 4e-75, Method: Composition-based stats.
Identities = 145/442 (32%), Positives = 214/442 (48%), Gaps = 42/442 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + P ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 6 RLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDI+DKI+ +A + + + F L L P+ +P
Sbjct: 66 --VAFIRNVTDIEDKILAKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI +I+ +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 118 RATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG- 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 177 -KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN +++ +L+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVLSA 354
+R + HYR ++F+ + +A G P A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVGLEDFLHRVRTRVGAVCPGDPTPRFAEA 346
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDL---------LPIFNASAHILGIEVCKEHLNKNI 405
L +DL+ A+ +H + E + D A ILG + +
Sbjct: 347 LDDDLSVPIALAEIHHVRAEGNRALDAGDHDGALRSASAIRAMMGILGCDPLDQRWESRD 406
Query: 406 S-----IAIEKLVQERLILLKM 422
A++ LVQ L +
Sbjct: 407 ETSAALAAVDVLVQAELQNREK 428
>gi|269986687|gb|EEZ92967.1| cysteinyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 467
Score = 286 bits (731), Expect = 6e-75, Method: Composition-based stats.
Identities = 162/475 (34%), Positives = 240/475 (50%), Gaps = 56/475 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L RKI F+A++ + MY CGPTVY++ HIGN R I +D + R L+ +
Sbjct: 1 MKVYNSLSRKIENFKALEQGKVTMYTCGPTVYNYVHIGNLRTFIFYDTVKRALKL--NDY 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V NITD+DDK I+ A + S+ T F++D +L T +
Sbjct: 59 KVKHVMNITDVDDKTIKGAIERRMSL------KEYTELYANYFLEDLNKLNVDMDTKFTK 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I +M +I ++ G+AYEA++ + F+ S +YG S K+ + + Y
Sbjct: 113 ATDNIDEMQKIIVKLVKEGYAYEADDGVYFNVSKFKDYGKLSGMKV-DGSYSRIKNDDYD 171
Query: 185 KKNPADFILWKRS--TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K+N +DF LWK E W+ +GRPGWHIECSAMS YLGK DIH G +DLIF
Sbjct: 172 KENASDFALWKYWDANDGEAYWKGELKKGRPGWHIECSAMSMKYLGKTIDIHCGAVDLIF 231
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENEIAQS + +K N W+H L + G+KMSKS NF T+ +L G+ +
Sbjct: 232 PHHENEIAQSESYSK-QKFVNYWLHAEHLLVNGQKMSKSLNNFYTLKDL------EGQGF 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------------ 350
RL + +HYR +DF + L + E LL+K + + ++
Sbjct: 285 NPLSFRLMAIDSHYRNKLDFNFENLRKYEKLLAKIDLSIKALNKVEKYEEKEDNYSRVQT 344
Query: 351 ----------VLSALYNDLNTVSAIQA---LHKLARESTKNHD--------LLPIFNASA 389
A+ NDLNT A+Q L LA E TK L + +
Sbjct: 345 KQKVEKVIELFKEAVNNDLNTHEALQHFLSLLDLADEKTKKGKIDNNEFSVLSTAISKAN 404
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+LGI +++ I I L +ER + K+F AD +R+++ G+ + D
Sbjct: 405 DVLGI-----YIDYKIPEEIIALAEEREQKRREKQFIEADLLREKISENGYSIAD 454
>gi|332654253|ref|ZP_08419997.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
gi|332517339|gb|EGJ46944.1| cysteine--tRNA ligase [Ruminococcaceae bacterium D16]
Length = 480
Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats.
Identities = 145/506 (28%), Positives = 218/506 (43%), Gaps = 82/506 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YN+ K EF P ++ MY CGPTVY FAHIGN R I+ DVL + LRY +
Sbjct: 1 MLLYNSATHKKEEFTTHTPGHVEMYTCGPTVYHFAHIGNLRSYIMEDVLEKFLRYSGYD- 59
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V V NITD+ +DK+++ A++EH ++ I T F D +L
Sbjct: 60 -VNRVMNITDVGHLSSDADTGEDKMLKGAKREHKTV------MEIAQYYTDAFFSDCAKL 112
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE-- 172
P AT I + I ++ ++ G+AY A + FD+S + Y F+ ++
Sbjct: 113 NIKTPDTVQPATGCIDEYIKIVSGLLDKGYAYVAGGNVYFDSSKLDRYYIFNDHNEEDLA 172
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ V E +K+N DF+LW + E W+SPWG G PGWHIECS +S Y G+
Sbjct: 173 VGVREGVEEDSNKRNKNDFVLWFTKSKFEDQALKWDSPWGVGYPGWHIECSGISLKYNGE 232
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H GG+D FPHH NEIAQS W H LN KMSKS G F+T++
Sbjct: 233 YLDLHCGGIDNAFPHHTNEIAQSESYLG-HPWCKQWFHVHHLNTNSGKMSKSKGEFLTVS 291
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
L E + + R L +HYR+ + F+ + L A+ K + +
Sbjct: 292 LLEE------KGYDPLSYRFFCLQSHYRKGLVFSWENLDNAQGAYQKLIKRIAALKEGGE 345
Query: 346 -------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCK 398
L + NDLNT A+ L+ + T + L I +L + + +
Sbjct: 346 PDQAVVQEYREKFLQQVGNDLNTSMAVTLLYDALKAKTDDATKLAILGDFDQVLSLSLLE 405
Query: 399 EHLN-------------------KNISIAIEKLVQER-----------LILLKMKKFSSA 428
+ A++ LV ER
Sbjct: 406 KAAQVRKEQAAQKTTSAGNYTITGEGDPAVDALVLERYQAKKAKDFAKAD---------- 455
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRM 454
IR +L+++G + D + +R+
Sbjct: 456 -QIRDELKAQGIEITDVPGGASWKRV 480
>gi|108804992|ref|YP_644929.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
gi|123068971|sp|Q1AU11|SYC_RUBXD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|108766235|gb|ABG05117.1| cysteinyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
Length = 470
Score = 285 bits (730), Expect = 8e-75, Method: Composition-based stats.
Identities = 163/497 (32%), Positives = 229/497 (46%), Gaps = 74/497 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+ ++L + E + +YVCGPTVY+ HIGN R + +DV R LR
Sbjct: 1 MSVKVRDSLSGGLVEVG--GDGRVGIYVCGPTVYNHIHIGNVRGHLFWDVAVRFLRSRGY 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V NITDIDDKII RA +E S I + T F + L P +
Sbjct: 59 --RVKFVWNITDIDDKIINRANEEGVS------WKEIVRRYTDSFHERLRLLGIGMPDVE 110
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRAT HIP+MI LI+ +I GHAY N ++ + + P YG+ S+++ +E K+ +
Sbjct: 111 PRATEHIPEMISLIEELIRRGHAYPAPNGDVYYAVETFPRYGALSKQRPEEMKITEKGQT 170
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
HK+NP DF LWK S P EP WESPWG GRPGWHIECSAM +L DIHGGG D+
Sbjct: 171 G-HKRNPLDFTLWKASKPGEPSWESPWGPGRPGWHIECSAMVEKHLPGGADIHGGGSDIR 229
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENE+AQSC A W H+G + + +KM+KS GN + E
Sbjct: 230 FPHHENELAQSCGAHPDRPFVRAWAHHGMVRMAAQKMAKSVGNVVDAREATLKHGR---- 285
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGII 347
IR+ +L +HY +PID++ + L E + P + G +
Sbjct: 286 ---DAIRMWLLQSHYSQPIDYSDEILEEKRRSCERLLRLYREISRSEASSPLSDRLAGEL 342
Query: 348 DPAVLSALYNDLNTVSAIQALHKLA----RESTKN-------HDLLPIFNASAHILGIEV 396
+A+ D NT AI AL A RE + L +LG +V
Sbjct: 343 RERFDAAMREDFNTPEAIAALFDAASGAGREISSRPSAAGEFASLKEALQELLGLLGFDV 402
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKK--------------------FSSADYIRKQLE 436
E +++ + I + + AD +R++L
Sbjct: 403 AGERVSEVDGVRI----------RHAGEAPGEVLERVARRERARRRREWPEADRLREELL 452
Query: 437 SKGFILEDYKNPDNGQR 453
+G+ +ED R
Sbjct: 453 REGWAIEDTAAGPVLSR 469
>gi|187735526|ref|YP_001877638.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
gi|187425578|gb|ACD04857.1| cysteinyl-tRNA synthetase [Akkermansia muciniphila ATCC BAA-835]
Length = 471
Score = 285 bits (729), Expect = 1e-74, Method: Composition-based stats.
Identities = 150/486 (30%), Positives = 229/486 (47%), Gaps = 52/486 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +Y+T R + +D +R Y CGPTVY HIGN R ++ DV R+L G
Sbjct: 1 MLHLYDTRTRTAQDISPMDGKTLRFYCCGPTVYGPTHIGNFRTFVMQDVFRRVLEL--GG 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T++RN+TD+DDK I +++ S+ + T+ F +D L CL P +P
Sbjct: 59 VPTTHIRNLTDVDDKTIRDSQKAGVSL------AEFTAGWADLFHRDCAALNCLPPHAEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDE-----QKMGT 177
A HIP+ I ++Q ++ GHAY + + F SS P YG S E
Sbjct: 113 SAVGHIPEQIRMVQTLVEKGHAYVSEDGSVYFRISSFPEYGRLSHLDERELDLGKTANTR 172
Query: 178 RVPEKYHKKNPADFILWKRSTPME--PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
++Y K + ADF+LWK P + W SPWG GRPGWH+ECSAM Y G FD+H
Sbjct: 173 SNADEYEKDSVADFVLWKSRRPEDGNNFWPSPWGEGRPGWHLECSAMIHKYFGNDFDLHS 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL+FPHHENE+AQS CA A +W H L ++G KMSKS GN T+ +L
Sbjct: 233 GGVDLVFPHHENEVAQSRCACGGG-FARLWFHITHLLVDGGKMSKSLGNMYTLADL---- 287
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI--------- 346
+R + +YR P++FT+ L +A+ L++ +
Sbjct: 288 --DKLGHRPSAVRYVLAGGYYRRPLNFTLSSLEDAKAALNRLSKFDMQLRNASGTDSVPS 345
Query: 347 ------------IDPAVLSALYNDLNTVSAIQALHKLARES-------TKNHDLLPIFNA 387
I +L +DLNT A+ + R++ + L F+
Sbjct: 346 YEEFCAAFPELGIFQPAWDSLNDDLNTPEALGHVFSAIRKADIPSLSPEEAARLRNAFHF 405
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
GI + E + I L +R + + ++ AD +R ++ + G++++D K+
Sbjct: 406 ILAAFGI-ILPEEGQEEAPEEIRTLADQRWQAKQNRDWTEADRLRAEVAALGWVIKDRKD 464
Query: 448 PDNGQR 453
+ R
Sbjct: 465 GYDLAR 470
>gi|294013315|ref|YP_003546775.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
gi|292676645|dbj|BAI98163.1| cysteinyl-tRNA synthetase [Sphingobium japonicum UT26S]
Length = 509
Score = 284 bits (727), Expect = 2e-74, Method: Composition-based stats.
Identities = 147/512 (28%), Positives = 229/512 (44%), Gaps = 80/512 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R + F I P++ R+Y CGPTVY++AH+GN R + D L R L + +
Sbjct: 16 LRLFNSLTRAVEPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKGLD- 74
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
VT++ NITD+ DDK+ AR + S I I + T F ++ L
Sbjct: 75 -VTHIINITDVGHLTSDADAGDDKMEAAARAQAKS------IWDIAAHYTDAFKRNIADL 127
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
+ P+ AT+++PQMI + I H YE + + FD+SS+P+YG+ + + +
Sbjct: 128 NIIPPSEWTVATDYVPQMIAFAEKI-APAHCYELESGLYFDSSSVPDYGALAGGR--DDA 184
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ K+NP+DF +W++S P E W+SPWG+G PGWH+ECS MS LG F
Sbjct: 185 AHARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPF 244
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE----------KTANIWIHNGFLNLEGRKMSKS 281
DIH GG+D HH NEIAQ+ A W+HN FL KMSKS
Sbjct: 245 DIHTGGIDHREIHHPNEIAQNQAFHGCCGEADAAAAGFTGARWWMHNNFLVDRQGKMSKS 304
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---- 337
G F T+ L++ RL L HYR ++F+ + ++ A L +
Sbjct: 305 KGGFTTLFSLIDA------GVHPLAYRLLCLGAHYRSELEFSAESVSAALTRLKRLVMGV 358
Query: 338 ---------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARES 375
+ +A+ +DL T A+ L + +A +
Sbjct: 359 ENLKARAEGVTWQSLRLDWLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEETIAMKK 418
Query: 376 TKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFS 426
+ L + A LG+ + + + IE + R K F+
Sbjct: 419 VPVDEKLCLLAAFDQALGLNLLTIGRADLRIQPRDAQIAPEEIEAELDHRQAARAEKDFA 478
Query: 427 SADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+D IR L ++G + D +P W+
Sbjct: 479 LSDEIRDALIARGVEVMDG-DPLRWD----WR 505
>gi|268316373|ref|YP_003290092.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
gi|262333907|gb|ACY47704.1| cysteinyl-tRNA synthetase [Rhodothermus marinus DSM 4252]
Length = 504
Score = 284 bits (726), Expect = 2e-74, Method: Composition-based stats.
Identities = 161/510 (31%), Positives = 234/510 (45%), Gaps = 64/510 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++YNTL R I ++ + +R+Y CGPTVY +AHIGN R + D++ R+ +
Sbjct: 5 SKTLRLYNTLTRSIEPIYPLERNRLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQALG 64
Query: 62 GEKCVTYVRNITDI-------------DDKIIERAR--QEHPSIPINDAISIITSKNTQQ 106
+ YV N+TD+ +DK +ERA +E P I + TQ
Sbjct: 65 WQTV--YVCNVTDVGHLTVDDYADASGEDK-LERALRSEEGRRFP---NIWDLARYYTQA 118
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
F++D L + P +PRAT HI Q I I+ ++ GHAYE + F S P+YG S
Sbjct: 119 FLEDWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLS 178
Query: 167 RRKIDEQ--KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+ EQ + V + K++P DF LWK+ W SPWG G PGWHIECS MS
Sbjct: 179 GNRDPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSM 238
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
YLG+ FD+H GG DLIFPHHE EIAQ+ + A W+H FL +EG KMSKS GN
Sbjct: 239 EYLGETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGN 297
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
F T+ EL+ + GG+ +R A++ YREP++FT + L ++ ++ ++ + +
Sbjct: 298 FFTVRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHV 357
Query: 345 GIIDPAVLSALYN--DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+ S D + + L L + L ILG +
Sbjct: 358 EAALESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAAALEGVKLILGFGDQLNRAS 417
Query: 403 KNIS----IAIEKLVQ-----ERLIL--LKMKK-FSSADY-------------------- 430
+ I+ L+ ER + K F
Sbjct: 418 AESARRWLDQIDALLGFVYPPERPCAHTRREKDPFVEKVERLLAERDAARRARDFARADA 477
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR+QL G + D TRW++K
Sbjct: 478 IREQLLQMGVEVMDT------PEGTRWRRK 501
>gi|85858128|ref|YP_460330.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85721219|gb|ABC76162.1| cysteinyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 769
Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats.
Identities = 132/491 (26%), Positives = 231/491 (47%), Gaps = 56/491 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I+ YN L R F+ ++P + M+ CGPT ++ HIG+ R +V D++ R L +
Sbjct: 303 ESTIRFYNVLSRSKNFFRPVNPDKVLMHSCGPTTHEVPHIGSYRRFVVSDLIRRYLEFRG 362
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V +V NI D+ D+ I A +E + + T++ + F+ D +L
Sbjct: 363 YE--VKHVLNIIDLADRSIRGAEREGMDLGV------YTARCEEVFLNDINKLNIKKDES 414
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PRA+ + M+ L++ ++ G AYE + FD S + +YG S + + G R+
Sbjct: 415 YPRASENFDSMVKLVEKLVDKGFAYEKLRSVYFDISKLRDYGCLSNIDLVRVQHGRRIDL 474
Query: 182 KYHKKN-PADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++K+ P DF L KRST E +++ WG RP WH+EC+A++ HYL FDIH
Sbjct: 475 DDYEKDSPVDFTLLKRSTLSELKRGVFFKTRWGNVRPSWHLECAAIAQHYLADTFDIHAS 534
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G D++FPH EN +A A ++ AN WI+ + + G+KMS+S N +T+ +L
Sbjct: 535 GSDIVFPHCENVMAIGKAATG-KRIANYWINTELVMVGGKKMSRSLNNALTLEDL----- 588
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQT 340
+ + +R ++ +HYR+P++F+ L A+ + K P
Sbjct: 589 -EKKGYSGREVRFFLVSSHYRKPLNFSFGALDTAKNTVLKLNGFIQRLIRLKAGEGDPDL 647
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASA 389
+ +A+ +DLN A+ L ++ + + +L
Sbjct: 648 EQKLYDLRQGFTAAMDDDLNISGALAVLFDFVKKVSSSLAQGVLTVEQRDQVLEALKKID 707
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ +E + IS +L++ R L + +++ AD IR++L G ++ D
Sbjct: 708 DVLGVMKFEE---EQISEEALQLMKRREALRQEGRWAQADEIRQRLLDMGVVVADTPEGM 764
Query: 450 NGQRMTRWKQK 460
W+ K
Sbjct: 765 V------WRLK 769
>gi|223996950|ref|XP_002288148.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
CCMP1335]
gi|220975256|gb|EED93584.1| probable cysteinyl-trna synthetase [Thalassiosira pseudonana
CCMP1335]
Length = 474
Score = 283 bits (725), Expect = 3e-74, Method: Composition-based stats.
Identities = 148/489 (30%), Positives = 217/489 (44%), Gaps = 60/489 (12%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YN+L R T F + ++ MY CGPTVYD AH+GN R + +DVL R+L Y +
Sbjct: 1 LTLYNSLTRSKTPFTPLRSPSVSMYTCGPTVYDSAHVGNFRAFLTYDVLKRVLLYLGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N+TD+DDKII+R +E S+ +T K +F +D L + PR
Sbjct: 60 -VDHVCNLTDVDDKIIKRCEREGVSLI------ELTRKFEGKFFEDLEALNIIKAREYPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG------SFSRRKIDEQKMGT 177
AT HI +M LI ++ +G AY+ F S YG + KI
Sbjct: 113 ATEHIDEMAKLILDLERNGLAYQSEEGSWYFSVSKKEGYGTRLVQLDPEQLKIGASAQRG 172
Query: 178 RVPEKYHKKNPA---DFILWKRSTPMEPGWESPWGR---------GRPGWHIECSAMSSH 225
+ + DF LWK P ++ W GRPGWH+ECSAM+
Sbjct: 173 SLDADEYDTEKEGVRDFCLWKAYKPEFDREDATWDPDGVTRNIGRGRPGWHLECSAMARK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG D+H GG+DL FPHHENEIAQS A+ N WIHNGF+N+ KMSKS GNF
Sbjct: 233 YLGDTIDLHAGGVDLKFPHHENEIAQSEGAN-CAPFCNCWIHNGFVNIGDEKMSKSKGNF 291
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+T+ T R ++ + YR P+ FT L A+ L + + T
Sbjct: 292 LTLRGACPTAD------DVRAYRYLVVSSQYRNPLSFTDAALGAAKGALKRLDKVKTLLD 345
Query: 346 IIDPAVLSAL---------------YNDLNTVSAIQALHKLARESTKNHDLLPIFNASA- 389
+ +DL+ A L + + + K +
Sbjct: 346 EALESSNDNSGDASAEKLTNFEVAIADDLSMPRASACLFSIVKAAEKEFKRVDKAKDEDD 405
Query: 390 -----HILGIEVCKEHLN-----KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
++G++ ++ L+ I + LV +R K + AD +R ++ G
Sbjct: 406 NAPPLDLVGLQRVRDALDLMDNVFEIPQDVMDLVVQRSAAKDAKDWDLADSLRTRITELG 465
Query: 440 FILEDYKNP 448
F ++D K
Sbjct: 466 FAVKDVKGG 474
>gi|322369387|ref|ZP_08043952.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
gi|320551119|gb|EFW92768.1| cysteinyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
Length = 495
Score = 283 bits (725), Expect = 4e-74, Method: Composition-based stats.
Identities = 143/505 (28%), Positives = 222/505 (43%), Gaps = 71/505 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + F+ DP ++ +Y CG TV DFAH+G+AR I DV++R L +
Sbjct: 1 MTLFVTNTLTGEREPFEPGDPDSVLLYYCGLTVSDFAHLGHARGWIHTDVMHRWLEHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+++KI R ++ + D + + Q ++D L
Sbjct: 61 D--VHHVENFTDVNEKITARVGED----DLGDDEADVARTFITQVIRDMRDLNLKRADVY 114
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P++ LI+ ++ G+AYE+N + FD ++ +YG S ++++E + E+
Sbjct: 115 PRVSEHLPEITDLIETLVEKGYAYESNGSVYFDVTTFEDYGKLSNQRVEEMEAQGEGDER 174
Query: 183 YHKKNPADFILWKRS--------------------TPMEPGWESPWGRGRPGWHIECSAM 222
K++P DF LWK P W+SPWG GRPGWHIECSAM
Sbjct: 175 GEKRHPGDFALWKADGVSEGAVEEHRDPDTEYAVSHPSGQTWDSPWGEGRPGWHIECSAM 234
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
S +LG+ DIH GG DL+FPHHENEIAQS A + A W+H L EG KMS S
Sbjct: 235 SMEHLGETIDIHVGGQDLVFPHHENEIAQSEAATG-HQFARYWLHVRLLETEGEKMSSSL 293
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
GN+ T+ + A +R+ +L T Y F+ + L EA +
Sbjct: 294 GNYSTVRGAIS-------EIGANAVRMFLLSTSYANRQTFSDETLNEAVERWDRLSDGYD 346
Query: 343 SK----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
A+ +D NT A+ AL L ++ D
Sbjct: 347 RAVEALDGPDARTKVEDDELRQAVTETREEFADAMNDDFNTRRALAALLDLVTAVNRHAD 406
Query: 381 ------------LLPIFNAS-AHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKF 425
+ F +LG + E +E ++ R +
Sbjct: 407 AHEEYDYDGLKSAVETFEELGGDVLGFSLGGEAGGDVRLAEDLVELVLDLREGERDAGNY 466
Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
AD +R L++ G ++D + +
Sbjct: 467 DRADALRDDLQALGVDVQDSDSGPS 491
>gi|237750277|ref|ZP_04580757.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
gi|229374171|gb|EEO24562.1| cysteinyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
Length = 499
Score = 283 bits (724), Expect = 5e-74, Method: Composition-based stats.
Identities = 146/519 (28%), Positives = 226/519 (43%), Gaps = 85/519 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ R + ++ + IRMY+CGPTVYD AH+G+AR I FD+L R L
Sbjct: 1 MKVYDSKHRDKIDLVPLNSNEIRMYICGPTVYDDAHLGHARSAISFDLLARFLETKGY-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +N TDIDDK+I ++ Q ++ + ++++D L +PR
Sbjct: 59 KVIVAKNFTDIDDKLINKSFQTKT------PLNELAKHYIDKYLQDMEPLNVRRAHFEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT + M I++++ AY N I S R +D+ RV +
Sbjct: 113 ATEFLESMSNFIESLLQKDIAYRLPNGDICLEVSKDKSYGTLSRHLDDTDSVHRVEVEEG 172
Query: 185 KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGL 238
K++ DF+LWK + G+ES G+GRPGWHIECSAM + DIH GG
Sbjct: 173 KRDQRDFVLWKAYKGENDIGYESILGKGRPGWHIECSAMIDSVLAYKDKEFCIDIHAGGQ 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHENE +Q+ C E A W+HNGF+ + G KMSKS GN I + L
Sbjct: 233 DLFFPHHENEASQTRCLHNKE-LAKYWLHNGFVTINGEKMSKSLGNSFFIKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
+ + ++R ++ THYR P+ F + L +++ L K +
Sbjct: 286 -KVYHGEILRNYLIGTHYRSPLHFNEEDLLQSKKRLDKIYRLKKRLDYEKDSIPKFLPFS 344
Query: 346 ----------------------------IIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L +L +DLN A+ + + +E+ +
Sbjct: 345 NDTDSIKANEWEEFFKPYMSEILKQATKDFSEKFLESLSDDLNISLALSVIEEFIKEANE 404
Query: 378 NHD-----------LLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILL 420
+ D +LG+ E + ++ + IE L++ERL
Sbjct: 405 HLDTQPKDKAYKAQAKANLALIDFVLGLGTLSYSEYFQLGVSDEEKLKIETLIKERLEAK 464
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+K F AD IR LE+ G + D + T W++
Sbjct: 465 AVKDFVKADSIRNTLENMGISIMDK-----SKEHTEWEK 498
>gi|197294544|ref|YP_001799085.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
gi|171853871|emb|CAM11833.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma australiense]
Length = 439
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 143/458 (31%), Positives = 217/458 (47%), Gaps = 43/458 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L + +F + P ++ MYVCGPTVY+ H+GNARP+I F+ + + L
Sbjct: 1 MLKIYNSLTNQKEDFIPLSPPDVNMYVCGPTVYNHLHLGNARPLIFFNTVKKYLETIGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV NITDIDDKII+ + Q+ + + + F++ L P
Sbjct: 60 -KVFYVVNITDIDDKIIKSSLQKQTKEEV------LAKEYISSFLQLLKDLNIETINSHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ATN+IP MI I+ ++ G AY + I F+ S I +YG + + + K R
Sbjct: 113 KATNYIPSMIEYIKVLLDKGFAYFTDQGIYFEISKISDYGQLKNQDLTQLKKNARKTLDP 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+KK P DF+LWK+++ ++SPW GRPGWH EC M DIHGGG DL FP
Sbjct: 173 NKKKPGDFVLWKKTSQG-VQYQSPWFCGRPGWHTECVTMIEQIFKTSLDIHGGGADLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HH+NEIAQ+ A + AN ++H L+ E +KMSKS GN + +LL + +
Sbjct: 232 HHQNEIAQAK-AYKNNNLANFFMHVARLDFENQKMSKSLGNIVWCKDLL-------KRFS 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
+ VI+ +L THYR+PI+F+ + +++ K I
Sbjct: 284 SSVIKFFILSTHYRKPINFSENLIKQSQKKYDKIMLFLIKNDFYLQIKKKPIVDLEPKII 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------SAHILGIEVCKEHL 401
+ + +D +T I + +E+ + L +LGIE
Sbjct: 344 DSFHRLMKDDFSTNKVIDLIEINIKEAYQKQQDLDFLAKIHKSLLWILDVLGIEPQFFRA 403
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
K + + K F AD++RK+L K
Sbjct: 404 EKKDFET----YVKWQEARQNKDFKQADFLRKELIDKN 437
>gi|327268009|ref|XP_003218791.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Anolis carolinensis]
Length = 686
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 145/540 (26%), Positives = 223/540 (41%), Gaps = 109/540 (20%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I+ YN+L + +P + Y CGPTVYD AH+G+A + FD++ R++ +
Sbjct: 156 ESGIQTYNSLSKSKEPLVLRNPDVVTWYSCGPTVYDHAHLGHACSYVRFDIIRRIMTRLF 215
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G K V V ITDIDDKII+RA + S + + F +D L L PT
Sbjct: 216 G-KEVVMVMGITDIDDKIIKRANEMGIS------PLTLARFYEEDFKQDMAALKVLPPTV 268
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
R T +IPQ+I IQ II H Y + + FD S + + P
Sbjct: 269 YMRVTENIPQIISFIQKIIASRHGYATSKGNVYFDVRSRGERYGKLANIYPDAQ---EEP 325
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K + DF LWK + P E W+SPWG+GRPGWHIECS +SS G DIH GG+DL
Sbjct: 326 VDSDKSHVKDFALWKAAKPQEMCWDSPWGKGRPGWHIECSTISSLVFGGHLDIHTGGIDL 385
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGG 299
FPHHENEIAQ + ++ AN ++H+G L+++ KMSKS N+ITI + L
Sbjct: 386 AFPHHENEIAQCEVYHQCDQWANYFLHSGHLHVKGSEKMSKSLKNYITIKDFL------- 438
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY--- 356
+ + + R+ L + YR I+++ ++EA+ +L +S L
Sbjct: 439 KEFSSDQFRMLCLRSRYRAGIEYSDDHMSEAKSILQIIYFFLSSVNAYMKGQLLCEDIRE 498
Query: 357 -------------------NDLNTVSAIQALHKLARESTKNHD----------------- 380
+D +T A+ A+ L +
Sbjct: 499 DVLWERLAHTKAAVRAACADDFDTPRAVGAIMDLIHHGNRQLKAVTKETGSPRSAMVFGA 558
Query: 381 LLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSA------ 428
++ + +GI + + + + +S I++LV R + F+ A
Sbjct: 559 IVSYIVEFLNTVGIALSEGEVTPENKHSAILSSVIDELVSFRTKVR---NFALAAPEATG 615
Query: 429 ------------------------------------DYIRKQLESKGFILEDYKNPDNGQ 452
D +R+ L G ++D +
Sbjct: 616 GDMSAEHAVPSKEAKQRQKEERQRLLKERETLLQACDDLRQDLSLYGITIKDRSTTSTWE 675
>gi|57505460|ref|ZP_00371388.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
gi|57016285|gb|EAL53071.1| cysteinyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
Length = 454
Score = 283 bits (723), Expect = 5e-74, Method: Composition-based stats.
Identities = 149/463 (32%), Positives = 224/463 (48%), Gaps = 54/463 (11%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
I MY+CGPTVYD AH+G+AR I FD+L R+L + + + RN TDIDDKI+++
Sbjct: 18 GVITMYLCGPTVYDHAHLGHARSSICFDLLRRVLLSLG--RKLYFARNYTDIDDKILKKM 75
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +++ IT K + +D L L P +P+AT +I QMI LI ++ G
Sbjct: 76 QESG------ESLEQITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQG 129
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
Y + I FDTS +Y S S+R ++ + ++ KKN ADF+LWK E
Sbjct: 130 FTYTLEDGIYFDTSKDKDYLSLSKRSFEDNQTRLNEQKE--KKNEADFVLWKF---DEGF 184
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
+ +P+G+GRPGWH EC AM DIH GG+DL FPHHENE AQ CA + A+
Sbjct: 185 YAAPFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLAS 243
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNGF+N+ G KMSKS N I + L + + +R ++ HYR +++
Sbjct: 244 HWLHNGFVNINGEKMSKSLNNSFFIEDAL-------KEFSGEALRFYLMSVHYRAHFNYS 296
Query: 324 VQRLTEAEILLSKWPQTSTSKG-------------IIDPAVLSALYNDLNTVSAIQALHK 370
++ L+ + L K + + +L AL +DLN A+ +
Sbjct: 297 LEDLSLCKKRLDKLYRLKKRLDLNLLEDKPKKCERELSLTILQALQDDLNISKALALFDE 356
Query: 371 LARESTKNHD--------LLPIFNASAHILG------IEVCKEHLNKNISIAIEKLVQER 416
+ D L F A I G I ++ +K IE + +R
Sbjct: 357 FIANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSKEQIAWIETQIAKR 416
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K K ++ AD +R+ L G +L D + T W++
Sbjct: 417 SEAKKAKDYALADKLRQDLAEFGVVLLDT------TQGTIWER 453
>gi|315638875|ref|ZP_07894047.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
gi|315481093|gb|EFU71725.1| cysteine--tRNA ligase [Campylobacter upsaliensis JV21]
Length = 454
Score = 282 bits (722), Expect = 7e-74, Method: Composition-based stats.
Identities = 148/463 (31%), Positives = 223/463 (48%), Gaps = 54/463 (11%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
I MY+CGPTVYD AH+G+AR I FD+L R+L + + + RN TDIDDKI+++
Sbjct: 18 GVITMYLCGPTVYDNAHLGHARSSICFDLLRRVLLSLG--RKLYFARNYTDIDDKILKKM 75
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +++ IT K + +D L L P +P+AT +I QMI LI ++ G
Sbjct: 76 QESG------ESLEQITQKYIAHYERDMKNLRVLEPDLKPKATEYIKQMIELILHLQRQG 129
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
Y + I FDTS Y S S+R + + ++ KKN +DF+LWK E
Sbjct: 130 FTYTLEDGIYFDTSKDKEYLSLSKRGFMDNQTRLIAQKE--KKNESDFVLWKF---DEGF 184
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
+ +P+G+GRPGWH EC AM DIH GG+DL FPHHENE AQ CA + A+
Sbjct: 185 YAAPFGKGRPGWHSECVAMIEALFKDSLDIHAGGVDLFFPHHENEAAQCRCAFN-KNLAS 243
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+HNGF+N+ G KMSKS N I + L + + +R ++ HYR +++
Sbjct: 244 HWLHNGFVNINGEKMSKSLNNSFFIKDAL-------KEFSGEALRFYLMSVHYRAHFNYS 296
Query: 324 VQRLTEAEILLSKWPQTSTSKG-------------IIDPAVLSALYNDLNTVSAIQALHK 370
++ L+ + L K + + +L AL +DLN A+ L +
Sbjct: 297 LEDLSLCKKRLDKLYRLKKRLDLNSLEDKPKKCERELSLTILQALQDDLNISKALALLDE 356
Query: 371 LARESTKNHD--------LLPIFNASAHILG------IEVCKEHLNKNISIAIEKLVQER 416
+ D L F A I G I ++ ++ IE + +R
Sbjct: 357 FIANANLKLDENKALKEGLREDFKELAFIFGVGFEDVILYFQQGFSEEQIAWIETQITKR 416
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K K ++ AD +R+ L G +L D + T W++
Sbjct: 417 SEAKKAKDYALADKLRQDLAEFGVVLLDT------AQGTIWER 453
>gi|225155153|ref|ZP_03723648.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
gi|224804100|gb|EEG22328.1| Cysteine--tRNA ligase [Opitutaceae bacterium TAV2]
Length = 472
Score = 282 bits (722), Expect = 8e-74, Method: Composition-based stats.
Identities = 161/481 (33%), Positives = 236/481 (49%), Gaps = 44/481 (9%)
Query: 3 KKIKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I+++++L R+ E R Y CGPTVY AHIGN R +V D++ RLL +
Sbjct: 1 MSIRLHDSLSREARELAPSHADGFFRFYNCGPTVYAPAHIGNFRTFVVNDLIRRLLEIEF 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G V +VRN+TD+DDK I R+R+E ++ +T + T++F D T L CL P
Sbjct: 61 GPDRVRHVRNLTDVDDKTIRRSREEK------RPLADVTLQWTEKFHADCTALGCLPPHV 114
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDE-------- 172
+P AT HI + I +I + GHAY A+ + F +S P YG+ SR K E
Sbjct: 115 EPAATTHIAEQIDMIAILERKGHAYRAADGSVYFKVNSFPGYGALSRVKERELKPGSALA 174
Query: 173 --QKMGTRVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSSHYLG 228
+ K++ +DF LWK P + W SPWG+GRPGWHIECSAMS +LG
Sbjct: 175 SGNAAPAAAHDSDEKEDGSDFALWKARKPEDGDVFWPSPWGQGRPGWHIECSAMSKKHLG 234
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D+H GG+DL+FPHHENEIAQS C + A W H+ L ++G+KMSKS N T+
Sbjct: 235 DTIDLHTGGVDLLFPHHENEIAQSQCCNGT-LFARHWYHSEHLLVDGKKMSKSLNNLYTL 293
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------- 341
++L E +R A+L H R+ ++FT+ L AE L+
Sbjct: 294 DQLREM------GHTPAALRYALLAGHPRKQLNFTLDSLHAAEKALATLRHFRDSLVKRG 347
Query: 342 ----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG---- 393
+ AVL+AL DLNT +A+ AL A ++
Sbjct: 348 LKPDHAPSTRFDAVLNALREDLNTPAALGALFGEINSYDHRPAHHGDLAAFDRVIQQALG 407
Query: 394 --IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ I L ++R + K +++AD +R Q+ + G+ + D K+ +
Sbjct: 408 LDLTPLPPPPPAEIPAETAALAEQRWTAKQQKNYAAADALRAQIAATGWTMIDRKDGYSL 467
Query: 452 Q 452
+
Sbjct: 468 E 468
>gi|257388228|ref|YP_003178001.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
gi|257170535|gb|ACV48294.1| cysteinyl-tRNA synthetase [Halomicrobium mukohataei DSM 12286]
Length = 494
Score = 282 bits (721), Expect = 8e-74, Method: Composition-based stats.
Identities = 140/510 (27%), Positives = 224/510 (43%), Gaps = 74/510 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL + F+ DP ++ +Y CG T D AH+G+AR + DV++R L +
Sbjct: 1 MTLRVTNTLTGEREAFEPRDPDSVLLYYCGLTTSDPAHLGHARGWVHVDVMHRWLAHLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+++KI+ R + ++ + + Q + D L
Sbjct: 61 D--VRHVENFTDVNEKIVARVGENG------ESEADVARHYVQSVIDDMRALNLRRAEVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P+++ +++ +I G+AYEAN + FD ++ YG S +++DE + E+
Sbjct: 113 PRVSEHVPEIVAMVETLIEKGYAYEANGSVYFDVTTFEEYGKLSNQQLDEIEAQGDPDEQ 172
Query: 183 YHKKNPADFILWKRS---------------------TPMEPGWESPWGRGRPGWHIECSA 221
K+NPADF LWK W+SPW GRPGWHIECSA
Sbjct: 173 SEKRNPADFALWKAGGVDPAAIEDHQHEGASPPEAACETAQTWDSPWSEGRPGWHIECSA 232
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS+ +LG+ DIH GG DL+FPHHENEIAQS A ++ A W+H L +G KMS S
Sbjct: 233 MSTTHLGETIDIHVGGQDLVFPHHENEIAQSEAATG-QQFARHWLHVRLLETKGEKMSSS 291
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF + ++ + V+R +L T Y ++ + EA +
Sbjct: 292 LGNFFAVEAAVD-------EYGTDVVRTFLLSTAYHNSAVYSEATIDEAIERWETLERGY 344
Query: 342 TSK----GIID------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+D +A+ +D NT A+ AL +L +
Sbjct: 345 ERAVRACDDVDAYATVEDDTLRTAVTTAREHFETAMNDDFNTREALAALTELVGAVNVHV 404
Query: 380 DLLPIFNASA-------------HILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKK 424
D F+ A +LG+ +E L+ R
Sbjct: 405 DEQSSFDYRALREAVETIEELGGGVLGLSFGGSEGGDVSVAEDLVELLLDVREAERAAGN 464
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ AD +R ++ES G ++D + +
Sbjct: 465 YERADELRDEVESLGVEVQDTDDGPTYRLG 494
>gi|227496370|ref|ZP_03926660.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
gi|226834097|gb|EEH66480.1| cysteine--tRNA ligase [Actinomyces urogenitalis DSM 15434]
Length = 496
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 155/515 (30%), Positives = 238/515 (46%), Gaps = 94/515 (18%)
Query: 3 KKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++Y++ R + + P + +Y+CG TV HIG+ R I FDVL R L
Sbjct: 7 PALRLYDSAARAVVPLAPTVTPGTVAIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERCG 66
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ ++ P +P + ++F L PT+
Sbjct: 67 --QHVLLVRNVTDIDDKILAKSAAATPPVP----WWAWAQRFEREFDAAYRALGVTPPTY 120
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDE-----QKM 175
+PRAT H+PQMI LIQ ++ GHAY + FD S+P+YGS + +++D+ +
Sbjct: 121 EPRATGHVPQMIDLIQRLLDAGHAYVGEAGNVYFDVRSLPDYGSLTNQRVDDLATTEDES 180
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK++ P EP W++PWGRGRPGWH+ECSAMS YLG+ FD
Sbjct: 181 QLDEDVEADKRDPRDFALWKKAKPGEPADAAWDTPWGRGRPGWHLECSAMSRRYLGESFD 240
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL FPHHENE AQS A A W+HN ++ ++G KMSKS GN + + ELL
Sbjct: 241 IHGGGIDLRFPHHENEQAQSHGAGWG--FARRWVHNAWVTVKGEKMSKSLGNSLVVAELL 298
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-- 350
+S+ V+RLA+ HYR ++F+ + L A L + T +
Sbjct: 299 -------KSYDPAVLRLALGTVHYRSTVEFSEETLDSAAALWERLAGAVTRAAEVSDDVD 351
Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-----------F 385
++A+ +DLN A+ +H + +
Sbjct: 352 APGEQLRERALPAEYVAAMDDDLNLAGAMAVVHATLKRLNTALAASAVDATEVGEAALDL 411
Query: 386 NASAHILGIEVCKEHLN----------------KNISIAIEKLVQE-------------R 416
A ++G++ E + + L+++
Sbjct: 412 RAELDVMGLDPLAEPWRSRVLGAGAAGGSDAAMSALDHLVTALIEDRAAARAAKDWARA- 470
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
D +R QL + G ++ED +
Sbjct: 471 ------------DALRDQLTAAGVVVEDGADGARW 493
>gi|116515227|ref|YP_802856.1| hypothetical protein BCc_306 [Buchnera aphidicola str. Cc (Cinara
cedri)]
gi|122285377|sp|Q057D6|SYC_BUCCC RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|116257081|gb|ABJ90763.1| cysteinyl-tRNA synthetase [Buchnera aphidicola str. Cc (Cinara
cedri)]
Length = 476
Score = 282 bits (721), Expect = 9e-74, Method: Composition-based stats.
Identities = 156/482 (32%), Positives = 235/482 (48%), Gaps = 57/482 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++I+NTL +K F + I +YVCG T YDF HIG+AR I+FD++ R L+Y
Sbjct: 1 MLRIFNTLTKKKEIFDFLLNKKINIYVCGVTTYDFCHIGHARTFIIFDIIIRYLQYLGYN 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
Y+RNITDIDDKII +A+ N++I I+ ++ + KD L + P +P
Sbjct: 61 T--FYIRNITDIDDKIINKAKIN------NESIHILVNRMIKLMHKDFLSLNLIKPDQEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
R T HI +I I+ ++ + +AY ++N+ + + S E+ T
Sbjct: 113 RVTQHISNIISSIKLLLKNNYAYVSDNKDILFKLNNFKEYGFLSNRMFNCSEKNFTTISK 172
Query: 181 EKYHKKNPADFILWKRSTPMEP----GWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHG 235
EK + N DF+LWK S + W SPWG GRPGWHIECS++ +++ V DIHG
Sbjct: 173 EKNYINNINDFVLWKHSNQLSIDTCTNWSSPWGAGRPGWHIECSSIINNFFKDGVVDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL+FPHHENEIAQ + N WIH+G + + KMSKS N ++I LL
Sbjct: 233 GGIDLLFPHHENEIAQLKSMNNSFS-VNFWIHSGMVINKNHKMSKSFSNSVSIQYLL--- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------- 340
+ + + +IR L THYR P+ ++ + L + + K ++
Sbjct: 289 ----KKYDSEIIRWYFLATHYRHPLYYSEKNLLMMKNIFIKIYRSLLDCVVTINTKIDYE 344
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHIL 392
+ I SA+ +D NT A L K+++ KN L IL
Sbjct: 345 YHLRNKIKRKFFSAMNDDFNTPKACSILQKISKLIYKNKKNNTYLANILASDLVYLGKIL 404
Query: 393 GIEVCKEH----------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
G+ + ++ I +EKL R K+++ +D IRK+L G I+
Sbjct: 405 GLFQNDPKNFFLKDNFCNKSTDLLIIVEKLFHMRNFYRSKKQWNLSDIIRKKLFCLGVIV 464
Query: 443 ED 444
ED
Sbjct: 465 ED 466
>gi|239947072|ref|ZP_04698825.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921348|gb|EER21372.1| cysteinyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 350
Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats.
Identities = 165/348 (47%), Positives = 220/348 (63%), Gaps = 15/348 (4%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNTL R F D +N++MYVCGPTVYD HIGN+R ++V+D+LYR++
Sbjct: 1 MQIQFHLYNTLSRTKEVFNPQDQANVKMYVCGPTVYDNPHIGNSRSVVVYDLLYRIVIKI 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+G + V YVRNITD+DDKII+RA + I+ +T K TQ+F + L C+ P+
Sbjct: 61 FGSRAVKYVRNITDVDDKIIDRAE------LLGITINELTDKVTQEFHTNMAYLGCMLPS 114
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+P+AT HI MI +I+ +I HAY A+N + FD S PNY S R ++E G RV
Sbjct: 115 IEPKATEHIDVMIEIIERLITKDHAYIADNHVYFDVLSAPNYTELSNRNLEEMFEGVRVE 174
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
KKNP DF+LWK + E +ESPWG GRPGWHIECSAMS YLG+ FDIHGGG
Sbjct: 175 NSKTKKNPQDFVLWKPAKQNESANMNFESPWGLGRPGWHIECSAMSYKYLGENFDIHGGG 234
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHH NEIAQS CA A WIHNGFL + G+KMSKS GNFIT+ +L++
Sbjct: 235 ADLIFPHHTNEIAQSRCAFLSSTYAKYWIHNGFLTVNGKKMSKSLGNFITVRDLMD---- 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+ V+RL +L +HYR P+D+ + + +A+ L W + +
Sbjct: 291 --KQIQGEVVRLFLLSSHYRRPLDYNDKAIEDAKKTLDYWYRAIENIN 336
>gi|76802853|ref|YP_330948.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
gi|76558718|emb|CAI50311.1| cysteine--tRNA ligase [Natronomonas pharaonis DSM 2160]
Length = 497
Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats.
Identities = 142/504 (28%), Positives = 221/504 (43%), Gaps = 66/504 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL + EF+ DP N+ +Y CG TV D+AH+G+AR + DV++R L
Sbjct: 1 MTLRVSNTLSGEREEFEPADPDNVLLYYCGLTVSDYAHLGHARTWVHVDVIHRWLEALGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V NITD+++KI+ R + D + + Q + D L
Sbjct: 61 D--VRHVENITDVNEKIVARVGEPADGDTFGDDEGDVATHFIDQLLSDMRSLNLKRAEVY 118
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P++I LI+ ++ G+AYE+N + FD + YG S ++++ + E+
Sbjct: 119 PRVSEHVPEIIDLIETLVERGYAYESNGSVYFDVTEFEEYGKLSNQRLEAVEAQGPETEQ 178
Query: 183 YHKKNPADFILWKR--------------------STPMEPGWESPWGRGRPGWHIECSAM 222
K++PADF LWK +P W SPWG GRPGWHIECSAM
Sbjct: 179 AEKRHPADFALWKAGGVSESALEEHRDADCEYATESPAGQTWASPWGEGRPGWHIECSAM 238
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
S +L DIH GG DL+FPHHENEIAQS A E+ A W+H ++ KMS S
Sbjct: 239 SMTHLDDSIDIHMGGRDLVFPHHENEIAQSEAATG-EQFARYWLHADLFQMDDEKMSSSL 297
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS- 341
GNFI ++E + + +R+ L Y ++ + EA +
Sbjct: 298 GNFIPVSEAVAR-------FGVNPLRMFFLSASYNSTQTYSEAAIEEALERWDRLAAAYE 350
Query: 342 --------------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
+ + A A+ +D NT A+ AL LA + D
Sbjct: 351 RAAAAADSPAAGTKVDSPLGEAVEAAEAAFTEAMNDDFNTREALSALFDLASAINSHLDD 410
Query: 382 L-------------PIFNASAHILGIEVCKEHLNKN--ISIAIEKLVQERLILLKMKKFS 426
+LG + + +E L++ R + + +
Sbjct: 411 RDRYDYRALRRGIEAFERLGGDVLGFDFDGSADGEAALAGELVELLLEVREAEREAENYE 470
Query: 427 SADYIRKQLESKGFILEDYKNPDN 450
AD IR +E+ G ++D +
Sbjct: 471 RADKIRDDIEALGVEIQDTDDGAE 494
>gi|157167844|ref|XP_001662428.1| cysteinyl-tRNA synthetase [Aedes aegypti]
gi|108871286|gb|EAT35511.1| cysteinyl-tRNA synthetase [Aedes aegypti]
Length = 526
Score = 281 bits (720), Expect = 1e-73, Method: Composition-based stats.
Identities = 161/507 (31%), Positives = 237/507 (46%), Gaps = 80/507 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IY+ R+ Q P+ I Y CGPTVYD AHIG+A + D+L R+L+ ++G
Sbjct: 22 IRIYSCRFREKVPLQLPSPARITSFYTCGPTVYDSAHIGHASCYVRLDILQRILKDHFGL 81
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ VT NITDIDDKII RA + + + I Q+F D RL P +
Sbjct: 82 RLVT-AMNITDIDDKIIRRAAE------VGKPWTDIARHYEQEFWTDLQRLNVRPPDIKL 134
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T+HIP+++ I+ +I +AY++ + + F+T++ P YG ++Q
Sbjct: 135 RVTDHIPRIVAFIEQLIAKNYAYKSSDGSVYFETANYPQYGKLQNIPTEQQSSP------ 188
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+ ADF LWK + P EP W SP+G GRPGWHIECS +++ G+ D H GGLDL F
Sbjct: 189 ESKKSAADFALWKAAKPGEPSWPSPFGLGRPGWHIECSTLATQIFGRQLDFHAGGLDLRF 248
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGR 300
PHHENE AQSCC ++ + WIH G L+L + KMSKS N ++I EL+
Sbjct: 249 PHHENEEAQSCCYHGVDDWVHYWIHTGQLHLEGQTHKMSKSLKNTVSIGELMG------- 301
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-------------------- 340
+ A R+ L++HYR I+F +T A +L K+
Sbjct: 302 KYSADEFRMLCLLSHYRSVIEFGDDSMTVATNVLKKFRSFFGDCRAYVEGVKPAGMIDSG 361
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFN 386
+D + L ND NT S + +L LA K+ +
Sbjct: 362 ALHGKVQEVDEKIEEFLRNDFNTASVVTSLGDLASTVNKSINQGNSGDAAIVASESGVVQ 421
Query: 387 ASAH-------ILGIEVCKE--------HLNKNISIAIEKLVQ----ERLILLKMKK--- 424
A + +LG+ E +I IE +VQ R+ + K
Sbjct: 422 AMMNYIRGKFTLLGLLEFDEVRKTSPGSGDGHSIEQVIESMVQIRGAIRVQAMDSKDRRL 481
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNG 451
F+ D IR +L+ ++D+ +
Sbjct: 482 FAICDQIRDRLKEVNVEIKDHGKSSSW 508
>gi|6599474|gb|AAF18749.1|AF162864_1 cysteinyl-tRNA synthetase [Rhodothermus marinus]
Length = 504
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 162/510 (31%), Positives = 234/510 (45%), Gaps = 64/510 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++YNTL R I ++ + +R+Y CGPTVY +AHIGN R + D++ R+ +
Sbjct: 5 SKTLRLYNTLTRSIEPIYPLERNPLRLYACGPTVYTYAHIGNFRSFLTADLIVRVAQALG 64
Query: 62 GEKCVTYVRNITD-----ID--------DKIIERAR--QEHPSIPINDAISIITSKNTQQ 106
+ YV N+TD +D DK +ERA +E P I + TQ
Sbjct: 65 WQTV--YVCNVTDVGHLTVDDYADASGQDK-LERALRSEEGRRFP---NIWDLARYYTQA 118
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS 166
F++D L + P +PRAT HI Q I I+ ++ GHAYE + F S P+YG S
Sbjct: 119 FLEDWQTLKLVEPDVRPRATEHIRQQILAIEQLVKTGHAYETRQGVYFHVPSFPDYGKLS 178
Query: 167 RRKIDEQ--KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+ EQ + V + K++P DF LWK+ W SPWG G PGWHIECS MS
Sbjct: 179 GNRDPEQLARAVRDVVQDPEKRDPRDFALWKKDEKHLMQWYSPWGWGFPGWHIECSVMSM 238
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
YLG+ FD+H GG DLIFPHHE EIAQ+ + A W+H FL +EG KMSKS GN
Sbjct: 239 EYLGETFDLHLGGEDLIFPHHECEIAQAESLTG-KPLARYWVHTRFLLVEGEKMSKSKGN 297
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
F T+ EL+ + GG+ +R A++ YREP++FT + L ++ ++ ++ + +
Sbjct: 298 FFTVRELIFPPEAGGQGIDPMALRYALISGKYREPLNFTRKHLRDSIRIVQRYQEAARHV 357
Query: 345 GIIDPAVLSALYN--DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN 402
+ S D + + L L + L ILG +
Sbjct: 358 EAALESDRSGPDRLGDRLSTIYDKTLEALCDDLNTPVALAAALEGVKLILGFGDQLNRAS 417
Query: 403 KNIS----IAIEKLVQ-----ERLIL--LKMKK-FSSADY-------------------- 430
+ I+ L+ ER + K F
Sbjct: 418 AESARRWLDQIDALLGFVYPPERPCAHTRREKDPFVEKVERLLAERDAARRARDFARADA 477
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR+QL G + D TRW++K
Sbjct: 478 IREQLLQMGVEVMDT------PEGTRWRRK 501
>gi|159484322|ref|XP_001700207.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
gi|158272523|gb|EDO98322.1| cysteinyl-tRNA synthetase [Chlamydomonas reinhardtii]
Length = 637
Score = 281 bits (718), Expect = 2e-73, Method: Composition-based stats.
Identities = 150/412 (36%), Positives = 216/412 (52%), Gaps = 49/412 (11%)
Query: 1 MKKKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
+++++ +NT+ + F+ + ++ MYVCG TVYD++HIG+AR + FDVLYR L
Sbjct: 32 LRERVTFFNTMSKSKELFRPRLSDGSVSMYVCGVTVYDYSHIGHARVYVAFDVLYRFLSA 91
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
G VTYVRN TDIDDKII RA+Q + S +T + +F KD L L P
Sbjct: 92 ACGY-KVTYVRNFTDIDDKIIARAQQARSGVET----SELTERFIDEFNKDMAALNVLPP 146
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+PRAT +PQMI I +II +GHAY + ++ FD +S+P YG S R+ ++ + G R
Sbjct: 147 ALEPRATAFVPQMISTITDIIANGHAYAVDGGDVFFDVASLPGYGRLSGRQQEDNRAGER 206
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V K++PADF LWK + P EP W SPWG GRPGWHIECS+M +G V DIHGGG
Sbjct: 207 VAVDSRKRSPADFALWKAAKPGEPAWPSPWGPGRPGWHIECSSMIRELMGPVIDIHGGGR 266
Query: 239 DLIFPHHENEIAQSCCADRIE---------------------------------KTANIW 265
DL+FPHHENE+AQS A W
Sbjct: 267 DLVFPHHENELAQSQAACGCGQHGHEHGHEHGGQQGGASTSGGDGSQSQLHNGTDFVRYW 326
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+HNGF+N++ KMSKS GNF TI ++L + +R ++ + YR P++++ +
Sbjct: 327 LHNGFVNVDSEKMSKSLGNFFTIRDVLAR-------YHPLALRWFLVSSQYRAPLNYSDK 379
Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L +A L + +++ + A + + A +
Sbjct: 380 GLEDASGRL--YYVAQARLDVVEALRAAGEEGQRAMAEAEVVMAQAAANANS 429
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 23/49 (46%)
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
A++ +QER K F+ +D IR L +KG +L D + +
Sbjct: 584 EEAVQAAIQERTEARAAKDFARSDAIRVDLAAKGVLLLDTPEGTSWRPG 632
>gi|103485844|ref|YP_615405.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
gi|98975921|gb|ABF52072.1| cysteinyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
Length = 527
Score = 280 bits (717), Expect = 2e-73, Method: Composition-based stats.
Identities = 144/538 (26%), Positives = 228/538 (42%), Gaps = 101/538 (18%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++N+L R++ F+ + P R+Y CGPTVY++ HIGN R + D L R L +
Sbjct: 11 SPPLRLFNSLTRRLETFEPVHPGEARVYSCGPTVYNYPHIGNMRAYVFADTLGRTLSFKG 70
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+T+V NITD+ +DK+ + A ++ +I I T+ + D
Sbjct: 71 Y--KLTHVINITDVGHLTDDADAGEDKLEKAAAEKA------QSIWDIARHYTEAYWADV 122
Query: 112 TRLACL--------APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
L H AT+++PQMI + I H YE ++ + FDTS++ +YG
Sbjct: 123 KALNIRGPMKAGKPEAAHWSIATDYVPQMIEFAKAIADK-HCYELDSGLYFDTSTVADYG 181
Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECS 220
+R DE + R+ K++PADF +W+++ P E W+SPWG+G PGWH+ECS
Sbjct: 182 RLARHATDEGES--RIDPVDGKRHPADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECS 239
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC-ADRIEKTANIWIHNGFLNLEGRKMS 279
MS LG FDIH GG+D HH NEIAQ+ + + A IW+HN FL KMS
Sbjct: 240 VMSEALLGFPFDIHTGGIDHREIHHPNEIAQNQARSCSTDSGARIWMHNNFLVERSGKMS 299
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ-------------- 325
KS G F+ + L++ + + RL L HYR ++F+ +
Sbjct: 300 KSAGEFLRLQLLID------KGYHPLAYRLMCLQAHYRSELEFSWEGLGAALTRLKRLVM 353
Query: 326 ---------RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL-----NTVSAIQ----- 366
L+E + ID + + D AI
Sbjct: 354 AVQRTKEAATLSEWKPFKKYLRSPGMVDDYIDSINETDEWFDFTGILGEFDDAISNDLNT 413
Query: 367 ----------ALHKLARESTKN-----HDLLPIFNASAHILGIEVCK---------EHLN 402
AL KL E+ + + L + I G+ + +
Sbjct: 414 ASAFPTSEKLALTKLVEEAVTDPFIQLDNRLRLIATMDQIFGLRLLELDRIDLRIRPKTA 473
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IE ++ R K F+++D +R +L + G + D W+ +
Sbjct: 474 TITESEIEAILTRRKEARAAKDFATSDKLRDELIAAGVEVMD-----GDPLGWDWRLE 526
>gi|320355263|ref|YP_004196602.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
gi|320123765|gb|ADW19311.1| cysteine synthase [Desulfobulbus propionicus DSM 2032]
Length = 775
Score = 280 bits (717), Expect = 3e-73, Method: Composition-based stats.
Identities = 145/485 (29%), Positives = 235/485 (48%), Gaps = 50/485 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++NT+ RK FQ I + + +Y CGPT + +I + R +IV D++ R L
Sbjct: 305 SQLRLFNTMTRKKEVFQPIRDNRVTLYACGPTAAESPNIAHCRRLIVADLINRSLLAQGY 364
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V N TD+DD I A + T + +F + L T
Sbjct: 365 --AVELYMNFTDLDDNTITGAIDAGADL------REFTGRYIDEFKQAIEALNVQQATGY 416
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P A+ H+ MI + ++I G+AYE I FD S +YG S + + K+G V
Sbjct: 417 PLASEHVGHMIEIAHDLIHKGYAYEKLGSIYFDISKFKHYGRLSGIDLSKIKIGQTVDLD 476
Query: 183 YHK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
++ NP DF L KRST E +E+ WG RPGWHIECSAMS++YLG+ DIH
Sbjct: 477 NYEKDNPRDFTLLKRSTLAELKKGIFYETDWGNIRPGWHIECSAMSTNYLGETIDIHTAS 536
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHENEIA + + AN W+H+G L ++GRKM+K GN +T+ E+L+
Sbjct: 537 QDLLFPHHENEIAIAEALTG-KPLANYWLHSGQLLMDGRKMAKETGNVVTLREVLD---- 591
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------------- 342
R + +R +L HYR+P+ F+ +RL A L + + +
Sbjct: 592 --RGYGGRELRFMLLGVHYRKPLLFSFKRLNAARTALRRIDEYTRKLLCLPAGLPHPELA 649
Query: 343 -SKGIIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASAH 390
++ A+ +DLN AI AL +++ + +D+L
Sbjct: 650 SYVSELEQRFHDAINDDLNISGAIGALFNFIKQTNPVVQARQLDRDQKNDVLEALRMVNT 709
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ + ++ I++L+++R ++K +++AD R++L KG + D
Sbjct: 710 VLGVLRLEHCP---LTPEIDRLIRQRERARQLKDWTAADSAREELLRKGVTIVDTAAGPI 766
Query: 451 GQRMT 455
+++T
Sbjct: 767 WEQIT 771
>gi|256371123|ref|YP_003108947.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007707|gb|ACU53274.1| cysteinyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 446
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 147/462 (31%), Positives = 218/462 (47%), Gaps = 35/462 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y+T R++ + P + +YVCGPTVYD H+G+ R +VFD L R L
Sbjct: 1 MLRLYDTARRELIQLTPGTPEQVTVYVCGPTVYDDPHLGHGRLAVVFDTLRRTLERL--V 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V NITDIDDKI++RA +E + P I + ++ L PT P
Sbjct: 59 APVRFVSNITDIDDKIVDRAAREGVTPP------AIAERYESRWWDAIDALGVRRPTVAP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A+ + M+ LI+ ++ GHAY N + +P+YG + ++E + G RV
Sbjct: 113 HASEWLDAMVALIERLVDRGHAYMTKNGVYLSVDHVPDYGLLKHQALEELRAGARVEVDD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK G+ + G GRPGWH EC AMS+ LG FD+HGGG+DL+FP
Sbjct: 173 AKRSPLDFALWKTVESDAYGFATSLGYGRPGWHTECVAMSTELLGSTFDLHGGGMDLVFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ D A W+HN F+ LEG KMSKS GN +++ + +
Sbjct: 233 HHENERAQASLLDMG--FAQHWVHNAFVELEGEKMSKSLGNTFGLHDAIASA-------G 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
V+RLA L HYR P++ T L +A L++ + + D
Sbjct: 284 GRVVRLAYLRAHYRSPVELTTTTLEQAAAQLARLDSQAGAGDARAAEPADLEEFDAALAD 343
Query: 364 AI---------------QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIA 408
+ LA ES + A LG+ V +I
Sbjct: 344 DLDTPAALAVMAEAARAARSAALAGESALANRRRAALAAMLETLGLPVPP---RASIPSE 400
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ LV ER + + F+ AD +R ++ + G+ + D N
Sbjct: 401 VTALVAERDHAKRDRDFARADALRAEIAALGYQVRDTPNGPE 442
>gi|150398926|ref|YP_001322693.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
gi|150011629|gb|ABR54081.1| cysteinyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 459
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 151/476 (31%), Positives = 226/476 (47%), Gaps = 50/476 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYNTL +K F + ++++VCGPT Y +HIG+AR I FD + R L+Y
Sbjct: 1 MLQIYNTLSKKEELFLPNHQNIVKLFVCGPTTYAESHIGHARTYIAFDAIVRYLKYLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++NIT + + + +++ +++++D L
Sbjct: 60 -TVFYLQNIT------DIDDKIIDKAKIQSKNPDLLSKHYEKKYLEDMENLGVNNVNFYA 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT H ++I ++ +I G AYE N + F+ S +G S + I+E RV
Sbjct: 113 RATEHTFEIINQVKILIEKGFAYETENGVYFEVSKFQEFGKLSNQNIEELN-VHRVNPDG 171
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+ DF+LWK+ + +P W+SPWG GRPGWHIE +A++ Y G +DIHGGGLDLIFP
Sbjct: 172 LKKDVKDFVLWKKVSE-KPCWDSPWGFGRPGWHIEDTAITEKYFGPKYDIHGGGLDLIFP 230
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHE EIAQ + W+H GFLN+ G KMSKS NFITI E+LE +
Sbjct: 231 HHEAEIAQMESISGEKPMVKYWMHTGFLNVNGTKMSKSLSNFITIKEILE-------KYN 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------- 347
A R +L THYR PIDF+ + L ++ + S
Sbjct: 284 ALEFRFFVLSTHYRSPIDFSSENLEASKKSFERITNFIKSTEFFIPILEIEHENDDLVEQ 343
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------PIFNASAHI 391
A+ ND NT AI A+ R K+ + + +
Sbjct: 344 NIKFTKEKFFDAMNNDFNTPLAISAIFGYVRFINKHLNDKNISKKSLLKSSELIFELMQV 403
Query: 392 LGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
LG E+ +KN ++ ++ R L + K++ +DYIR +L ++D K
Sbjct: 404 LGFEIKTNLKNDKNAEELLDLILNVRSKLREKKEWEISDYIRNRLNEINIKIDDIK 459
>gi|291528005|emb|CBK93591.1| cysteinyl-tRNA synthetase [Eubacterium rectale M104/1]
Length = 475
Score = 280 bits (716), Expect = 3e-73, Method: Composition-based stats.
Identities = 154/501 (30%), Positives = 223/501 (44%), Gaps = 77/501 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K YNTL R+I I MY CGPTVY FAHIGN R I+ DVL + LRY
Sbjct: 1 MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH S+ + + T F KD
Sbjct: 61 GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
T + P ATN IP+ I++++ +I G+AY A + FDTS + +Y FS
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172
Query: 171 DEQKM---GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
EQ V E +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG+ DIH GG+D IFPHH NEIAQS W H LN KMSKS G
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGA 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+T++ L E + + R L +HYR+P++F+ L A +K +
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345
Query: 345 -----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
A+ NDLNT AI ++ + + + L + + +L
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405
Query: 394 IEVCKE-----HLNKNISIAIEKLVQE-----------------RLILLKMKKFSSADYI 431
+ + + ++ +E + + D I
Sbjct: 406 LGLRESGKALLEAASSVDSELEAFINDKIAERAAAKKAKDFATA-------------DAI 452
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R +L +KG ++D + +
Sbjct: 453 RDELLAKGVAIKDTREGVKWE 473
>gi|238923819|ref|YP_002937335.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
gi|238875494|gb|ACR75201.1| cysteinyl-tRNA synthetase [Eubacterium rectale ATCC 33656]
Length = 475
Score = 280 bits (715), Expect = 5e-73, Method: Composition-based stats.
Identities = 153/501 (30%), Positives = 224/501 (44%), Gaps = 77/501 (15%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ K YNTL R+I I MY CGPTVY FAHIGN R I+ DVL + LRY
Sbjct: 1 MENNFKFYNTLTRQIDTVVPRVDGKIGMYTCGPTVYHFAHIGNIRSYIMEDVLEKALRYV 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
+ V V NITD+ +DK+++ A++EH S+ + + T F KD
Sbjct: 61 GYD--VKRVMNITDVGHLSSDGDTGEDKMLKGAKREHKSV------MEVAKEYTDAFFKD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
T + P ATN IP+ I++++ +I G+AY A + FDTS + +Y FS
Sbjct: 113 FTAVHNRMPDVVEPATNCIPEFIHMVEVLIEKGYAYFAGGNVYFDTSKLDDYFVFSSAVE 172
Query: 171 DEQKM---GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSS 224
EQ V E +KKN DF+LW + E W+SPWG G PGWHIECS +S
Sbjct: 173 KEQLQVGVRDDVEEDVNKKNKNDFVLWFTQSKFEDQALKWDSPWGVGYPGWHIECSCISM 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG+ DIH GG+D IFPHH NEIAQS W H LN KMSKS G
Sbjct: 233 KHLGEYVDIHCGGVDNIFPHHTNEIAQSESYLG-HDWCKYWFHVNHLNDRAGKMSKSKGA 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+T++ L E + + R L +HYR+P++F+ L A +K +
Sbjct: 292 ILTVSVLQE------KGYNPLAYRFFCLQSHYRKPLEFSFDALDNAVAAYNKIAKRVAEL 345
Query: 345 -----------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
A+ NDLNT AI ++ + + + L + + +L
Sbjct: 346 KDEGDIDETAFADFKKKFTDAVSNDLNTSMAITIVYDVLKADISDRTKLALIDDFEQVLD 405
Query: 394 IEVCKE-----HLNKNISIAIEKLVQE-----------------RLILLKMKKFSSADYI 431
+ + + + ++ +E + + D I
Sbjct: 406 LGLRESGKALLEASSSVDSELEAFINDKIAERAAAKKAKDFATA-------------DAI 452
Query: 432 RKQLESKGFILEDYKNPDNGQ 452
R +L ++G ++D + +
Sbjct: 453 RDELLARGVAIKDTREGVKWE 473
>gi|289642333|ref|ZP_06474481.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
gi|289507865|gb|EFD28816.1| cysteinyl-tRNA synthetase [Frankia symbiont of Datisca glomerata]
Length = 528
Score = 279 bits (714), Expect = 5e-73, Method: Composition-based stats.
Identities = 137/353 (38%), Positives = 192/353 (54%), Gaps = 25/353 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ IY+T R++ F+ + P ++ +YVCGPTV H+G+ R + FD+L R L
Sbjct: 1 MGLHIYDTRTRRLRPFEPLRPGHVSVYVCGPTVQSPPHVGHIRTAVAFDLLRRWLVASGL 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT+V+N+TDIDDKII A + +++ + ++ T+ F + L PT Q
Sbjct: 61 E--VTFVQNVTDIDDKIIINASRAG------ESVWELATRQTRAFDDAYRAVGVLPPTIQ 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+M+ LI ++ G+AY + F S YG S ++ + +
Sbjct: 113 PRATGHIPEMLALIGRLVDTGYAYPGGGSVWFRVSRFAGYGGLSHQRPEAVQASPE--CD 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP WESPWGRGRPGWHIECSAM+ YLG+VFDIHGGGLDL+F
Sbjct: 171 EGKVDPRDFALWKGAKPGEPFWESPWGRGRPGWHIECSAMAGKYLGEVFDIHGGGLDLVF 230
Query: 243 PHHENEIAQSCCADRIE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
PHHENE AQS A + A W+H G L G KMSKS GN +++ E
Sbjct: 231 PHHENERAQSASAAHSHGGAGGGAPQMARYWMHVGLLTTGGTKMSKSLGNSFLVSDAFEQ 290
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+ V+R +L HYR +++T + L E+ + + I
Sbjct: 291 VR-------PQVLRYHLLSAHYRSSLEYTPEGLAESAAAHDRIETFVRNALDI 336
Score = 80.5 bits (197), Expect = 6e-13, Method: Composition-based stats.
Identities = 16/104 (15%), Positives = 34/104 (32%), Gaps = 15/104 (14%)
Query: 363 SAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE------HLNKNISI 407
A+ L + + +LG++ + L ++
Sbjct: 422 RALAVLFGAVGRGNQVLSKARRRELAGWVDVVRRMLVVLGLDPVSQWPAAGSELRPALNG 481
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+E ++ R + ++ AD IR +L + G I+ED
Sbjct: 482 VMEIVLDLRSAARARRDYTEADEIRSRLAAGGIIVEDTPEGQRW 525
>gi|109121280|ref|XP_001083935.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
isoform 3 [Macaca mulatta]
Length = 563
Score = 279 bits (714), Expect = 6e-73, Method: Composition-based stats.
Identities = 146/524 (27%), Positives = 221/524 (42%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 52 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNI 111
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 112 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 164
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II GHAY + FD S + + P
Sbjct: 165 TENIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVGVVPGP---VGEPADSD 221
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 222 KRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 281
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L+++ KMSKS N+ITI + L +++
Sbjct: 282 HENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTF 334
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
V R L + YR ID++ + + +
Sbjct: 335 SPDVFRFFCLRSSYRSAIDYSDSAMLHAQQQLLALGSFLEDARAYMKGQLACGSVREVML 394
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV AL +D +T + A+ LA ++
Sbjct: 395 WERLASTRSAVKEALADDFDTPRVVDAILGLAHHGNGQLRAASKEPGVPRSPAVFGAIIS 454
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA--------- 428
F +GI + + +E+LV+ R + + F+ A
Sbjct: 455 YFEQFFETVGISLGNQQCVSGDGSEATLRGVVEELVRFRQKVRQ---FALAKAEATGEAR 511
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + + W+
Sbjct: 512 RQQLLERQPLLEACDTLRQDLTAHGISIKDRNSTTS-----TWE 550
>gi|221633882|ref|YP_002523108.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
gi|221156184|gb|ACM05311.1| cysteinyl-tRNA synthetase [Thermomicrobium roseum DSM 5159]
Length = 407
Score = 279 bits (713), Expect = 8e-73, Method: Composition-based stats.
Identities = 149/409 (36%), Positives = 208/409 (50%), Gaps = 35/409 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L I F +D +R+YVCG T YD H+G+A +VFD+L R+ +Y+
Sbjct: 10 RLFNSLTGTIEPFAPLDGRTVRLYVCGVTPYDTTHMGHAMTYLVFDILNRICQYHGW--R 67
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+NITDIDD I+ +ARQ + + + + +QF +D L L P+ PRA
Sbjct: 68 VKYVQNITDIDDDILRKARQ------VGEPWDRLGDRYIRQFQEDLNALNVLFPSVFPRA 121
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVPE 181
T IP MI +IQ ++ G AY + + F +S P+YG R DE P+
Sbjct: 122 TEEIPLMIEIIQKLLERGAAYMRDGNVYFRVASDPDYGHLCRCSRDEMIRLSAERGADPQ 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++P DF+LW+ + P EP W+SPWG GRPGWHIECSAM+ YLG D+HGGG DLI
Sbjct: 182 DPRKEDPLDFLLWQAAQPGEPTWDSPWGPGRPGWHIECSAMAMKYLGPQIDVHGGGYDLI 241
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
+PHHE+EIAQS A W+H + EG KMSKS GN + + + L R
Sbjct: 242 YPHHESEIAQSESYTGTSPFARFWVHVAMVEYEGAKMSKSLGNLVLVRDTL-------RR 294
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST---------SKGIIDPAVL 352
IRL +L HYR P + E L+ + + T + +
Sbjct: 295 HTGDAIRLYLLSHHYRTPFAYEDDGPARFEPLVQRLREAVTAPGGSGSPLDLAPLRDQLA 354
Query: 353 SALYNDLNTVSAIQALHK-------LARESTKNHDLLPIFNASAHILGI 394
+AL +DL+T AIQ L ARE +LG+
Sbjct: 355 AALADDLDTPRAIQLLADAAERLLRAAREGQAIEQAREQLREMGSLLGL 403
>gi|225631085|ref|ZP_03787816.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225591218|gb|EEH12369.1| Cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 350
Score = 279 bits (713), Expect = 8e-73, Method: Composition-based stats.
Identities = 164/345 (47%), Positives = 221/345 (64%), Gaps = 18/345 (5%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +K F D +++MYVCGPTVYD AHIGNAR ++V+DVL+RLL++ YG
Sbjct: 3 RLYNTLTKKKELFTPTDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFRLLKFCYG--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I IT+ + F D + C PTH+P+A
Sbjct: 61 VTYVRNITDIDDKIINAASEK------NSNIESITTYYIKAFHDDMESINCKEPTHEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T ++ +I LI++++ GHAYE++ + F+ S YG+ S +K DE G+RV +K
Sbjct: 115 TENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENK 174
Query: 186 KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+P DF+LWK + ++ W SPWG GRPGWHIECSAMS YLGK FDIHGGG+DL
Sbjct: 175 KHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWHIECSAMSYAYLGKDFDIHGGGIDLQ 234
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIAQS A A WIHNGFL + KMSKS N + + +LL++
Sbjct: 235 FPHHENEIAQSKSAFAGSMFAKYWIHNGFLTVNEEKMSKSLFNIVKVRDLLDS------G 288
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
VIR A+L THYR+P+D+T +++A+ L+K+ + I
Sbjct: 289 IKGEVIRYALLKTHYRKPLDWTENVISDAQETLNKFYRLLRGLDI 333
>gi|94495840|ref|ZP_01302419.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
gi|94424532|gb|EAT09554.1| cysteinyl-tRNA synthetase [Sphingomonas sp. SKA58]
Length = 518
Score = 278 bits (712), Expect = 9e-73, Method: Composition-based stats.
Identities = 149/513 (29%), Positives = 229/513 (44%), Gaps = 81/513 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R + F I+ + R+Y CGPTVY++AHIGN R + D L R L +
Sbjct: 23 LRLFNSLTRAVAPFAPIEDGHARVYSCGPTVYNYAHIGNLRAYVFTDTLRRTLLWKG--L 80
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
VT++ NITD+ DDK+ AR S I I + TQ F ++ L
Sbjct: 81 SVTHIINITDVGHLTSDADAGDDKMEAAARASAKS------IWDIAAHYTQAFKQNIADL 134
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
+AP+ AT+++PQMI + I H YE ++ + FD+ S+P+YG+ + + +
Sbjct: 135 NIIAPSEWTVATDYVPQMIEFAEKI-APDHCYELDSGLYFDSRSVPDYGALAGGR--DDA 191
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ K+NP+DF +W++S P E W+SPWG+G PGWH+ECS MS LG+ F
Sbjct: 192 AHARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSQARLGQPF 251
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKT-----------ANIWIHNGFLNLEGRKMSK 280
DIH GG+D HH NEIAQ+ A W+HN FL KMSK
Sbjct: 252 DIHTGGIDHREIHHPNEIAQNQAFHACCDPDVGAVDAGFTGARWWMHNNFLVDRQGKMSK 311
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--- 337
S G F T+ L++ RL L HYR ++F+ L A L +
Sbjct: 312 SKGGFTTLFSLIDA------GVHPLAYRLLCLGAHYRSELEFSADNLAAALTRLKRLVMG 365
Query: 338 ----------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARE 374
+ +A+ +DL T A+ L + +A +
Sbjct: 366 VEGLKARAEGVTWQSPRLDYLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEEAIAVK 425
Query: 375 STKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKF 425
+ L + A LG + + + + +E ++ R K F
Sbjct: 426 KVPADEKLCLIAAFDQALGFNLLSLTRADLRMRPKDAQLTADQVETELERRAAARANKDF 485
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+ +D IR +L +KG + D +P W+
Sbjct: 486 ALSDTIRDELIAKGVEVMDG-DPLRWD----WR 513
>gi|307295116|ref|ZP_07574958.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
gi|306879590|gb|EFN10808.1| cysteinyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
Length = 505
Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats.
Identities = 147/508 (28%), Positives = 228/508 (44%), Gaps = 76/508 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R + F I P++ R+Y CGPTVY++AH+GN R + D L R L + +
Sbjct: 16 LRLFNSLTRTVDPFAPIQPNHARVYSCGPTVYNYAHLGNLRAYVFTDTLRRTLLWKGLD- 74
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
VT++ NITD+ DDK+ AR + S I I + T F ++ L
Sbjct: 75 -VTHIINITDVGHLTSDADAGDDKMEAAARAQAKS------IWDIAAHYTDAFKRNIADL 127
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
+AP+ AT+++PQMI + I H YE + FD+SS+P+YG+ + + +
Sbjct: 128 NIIAPSEWTVATDYVPQMIAFAEKI-APAHCYELETGLYFDSSSVPDYGALAGGR--DDA 184
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ K+NP+DF +W++S P E W+SPWG+G PGWH+ECS MS LG F
Sbjct: 185 AHARIDPVAGKRNPSDFAIWRKSPPGEQRQMEWDSPWGKGAPGWHLECSVMSEARLGHPF 244
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTA------NIWIHNGFLNLEGRKMSKSNGNF 285
DIH GG+D HH NEIAQ+ W+HN FL KMSKS G F
Sbjct: 245 DIHTGGIDHREIHHPNEIAQNQAYCACNDAQPGFTGAQWWMHNNFLVDRQGKMSKSKGGF 304
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------- 337
T+ L++ RL L HYR ++F+ + ++ A L +
Sbjct: 305 TTLFSLIDA------GVHPLAYRLLCLGAHYRSELEFSAESVSAALTRLKRLVMGVENLK 358
Query: 338 -----------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKNH 379
+ +A+ +DL T A+ L + +A +
Sbjct: 359 ARAEGITWQSLRLDWLRANLHPKLAPLLEQFDAAISDDLMTPRALPLLEETIAMKKVPVD 418
Query: 380 DLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
+ L + A LG+ + + + IE + R K F+ +D
Sbjct: 419 EKLCLLAAFDQALGLNLLTIGRADLRIQPRDAQIAPDEIEAELDRRQTARAEKDFALSDE 478
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IR L ++G + D +P W+
Sbjct: 479 IRDALIARGVEVMDG-DPLRWD----WR 501
>gi|76799247|ref|ZP_00781419.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
gi|76585400|gb|EAO61986.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
Length = 320
Score = 278 bits (712), Expect = 1e-72, Method: Composition-based stats.
Identities = 128/329 (38%), Positives = 189/329 (57%), Gaps = 19/329 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IKIY+T+ R + +F ++ + MYVCGPTVY++ HIGNAR ++ FD + R Y +
Sbjct: 1 MIKIYDTMTRSLQDFIPLNEGKVNMYVCGPTVYNYIHIGNARSVVAFDTIRRYFEYCGYQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ N TD+DDKII+ A + + K F++D L T P
Sbjct: 61 --VNYISNFTDVDDKIIKGAAEAGMDT------KSFSDKFISAFMEDVAALGVKPATKNP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK- 182
R +++ ++I ++ ++ AYEAN ++ F S +Y + + +++ ++G
Sbjct: 113 RVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLANKTLEDLEIGASGRVDG 172
Query: 183 --YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP DF LWK + E WESPWG+GRPGWHIECS M++ LG DIHGGG DL
Sbjct: 173 EGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMATEILGDTIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH NEIAQS + AN W+HNGF+N++ KMSKS GNFIT++++L +
Sbjct: 233 EFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGNFITVHDML-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
S VIR + YR+P++FT + + +
Sbjct: 285 SVDGQVIRFFLATQQYRKPVNFTEKAVHD 313
>gi|293194132|ref|ZP_06609933.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
gi|292819774|gb|EFF78785.1| cysteine--tRNA ligase [Actinomyces odontolyticus F0309]
Length = 454
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 143/432 (33%), Positives = 217/432 (50%), Gaps = 51/432 (11%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +Y++ ++ + P + +Y+CG TV H+G+ R + FD L R LR E
Sbjct: 1 MLHLYDSKSARVQPLTPVTPGKVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VTYVRN+TDIDDKI+ ++ + + ++F + L APT++P
Sbjct: 61 --VTYVRNVTDIDDKILHKSAEAGWD------WWAWAYRFEREFTQAYETLGVQAPTYEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK-----MGT 177
RAT HIP+ + L+Q++I GHAY + + FD S +YGS +R+++ + +
Sbjct: 113 RATGHIPEQLDLVQSLIDAGHAYSDGHGNVYFDVHSQADYGSLTRQRLADMRTTEDDAQI 172
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
+ K++P DF LWK + P EP W+SPWGRGRPGWH+ECSAMS YLG FDIH
Sbjct: 173 DEAVEAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIH 232
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG+DL FPHHENE AQS A + A +W+HN ++ +G KMSKS GN ++I L E
Sbjct: 233 GGGIDLRFPHHENEQAQSHGAG--WEFARLWVHNAWVTTKGEKMSKSLGNVLSIGALTE- 289
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK---------- 344
+PA +R A+ H+R I++ + L A K+
Sbjct: 290 ------EYPAVAVRWALSTVHHRSSIEWGAETLPAAHAAWEKFSTFVARAIETAGEAPAS 343
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---------IFNASA 389
+ A ++A+ +DLN A+ LH+ + + +
Sbjct: 344 EIALAPADLPEAFVAAMDDDLNVAGALAVLHEHLKAGNAALAAGDVSGVYREQILVRSML 403
Query: 390 HILGIEVCKEHL 401
+LG++ E
Sbjct: 404 DVLGLDPASEQW 415
>gi|55378085|ref|YP_135935.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
gi|68052897|sp|Q5V2M3|SYC_HALMA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|55230810|gb|AAV46229.1| cysteinyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
Length = 492
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 142/506 (28%), Positives = 225/506 (44%), Gaps = 75/506 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL + F+ DP ++ +Y CG T D H+G+AR + DV+ R L Y
Sbjct: 1 MTLRVTNTLTGEKEPFEPRDPDSVLLYYCGLTTSDPPHLGHARGWVHVDVMARWLDYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N+TD+++KI+ R ++ D+ + + QQ + D L
Sbjct: 61 D--VHHVENLTDVNEKIVARVGEDG------DSEADVARHYVQQAIDDMRSLNLGRAEVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P++I L++ +I GHAYE N + FD +S +YG S + +D+ + E
Sbjct: 113 PRVSEHVPEIIDLVERLIEQGHAYEQNGSVYFDVTSFEDYGKLSNQSVDDIESQGADTEG 172
Query: 183 YHKKNPADFILWKR--------STPMEPG-------------WESPWGRGRPGWHIECSA 221
K++PADF LWK + P W+SPWG GRPGWHIECSA
Sbjct: 173 E-KRHPADFALWKAGGVDPADIAEHQHPEAAPAEEACQTAQIWDSPWGEGRPGWHIECSA 231
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS +L + DIH GG DL+FPHHENE+AQS A ++ AN W+H L E KMS S
Sbjct: 232 MSMTHLDESIDIHVGGQDLVFPHHENEVAQSEAATG-KQFANYWLHVRLLETEEEKMSSS 290
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GN+ T+ + +E + V+R +L T Y ++ + + EA+ + +
Sbjct: 291 LGNYFTVADAVE-------EFGPDVLRTFLLSTAYTSRATYSDETIAEAKERWDRLSRGY 343
Query: 342 TSKGIIDPAVLSAL----------------------YNDLNTVSAIQALHKLARESTKNH 379
V + +D NT A+ AL L +
Sbjct: 344 ERAVEACDDVDAHTKVTDETLRDAVEDARSAFEAALNDDFNTREAMTALLDLTAAVNTHV 403
Query: 380 D------------LLPIFNAS-AHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKK 424
D + F ILG+ + ++ ++ R +
Sbjct: 404 DGHDEYDYQGLRRAVETFEEFGGGILGLAFGDDDSGDVSLAGDVVDLVLTVRQQEREAGN 463
Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
+ AD +R +LE+ G ++D +
Sbjct: 464 YERADELRDELEALGVEVQDTDDGPT 489
>gi|47226781|emb|CAG06623.1| unnamed protein product [Tetraodon nigroviridis]
Length = 499
Score = 278 bits (711), Expect = 1e-72, Method: Composition-based stats.
Identities = 148/508 (29%), Positives = 222/508 (43%), Gaps = 91/508 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L ++ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 14 LKVFNSLTKQKEPLILAREGVATWYSCGPTVYDHAHLGHACSYVRFDIVQRILTRLFG-I 72
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + +TDIDDKII+R+ +E+ + I S +F +D L + P R
Sbjct: 73 TVIHAMVVTDIDDKIIKRSWEENICSTV------IASLYEDEFKRDMLSLKVIPPAVYLR 126
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++PQ++ I+ II +GHAY ++ FD SI R ++
Sbjct: 127 VTENVPQIVSFIERIIENGHAYAAREGDVYFDIKSIGE-----RYGKFGGAADSQPEPGS 181
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
HK++ DF LWKRS EP WESPWGRGRPGWHIECS ++S G DIH GG+DL FP
Sbjct: 182 HKRDARDFALWKRSKAGEPSWESPWGRGRPGWHIECSTIASTVFGSQLDIHSGGIDLAFP 241
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRS 301
HHENEIAQS + + AN ++H+G L+L+ KMSKS N+ITI + L +S
Sbjct: 242 HHENEIAQSEAYHQCGQWANYFLHSGHLHLKSSAEKMSKSLKNYITIKDFL-------KS 294
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY----- 356
+ A R+ L++ YR +D++ + EA L G L
Sbjct: 295 FSANEFRMFCLLSKYRSAVDYSDGSMLEARSSLGSICSFMHDAGAYMKGQLQCTSVQEAF 354
Query: 357 -----------------NDLNTVSAIQALHKLARESTKNHD-----------------LL 382
D +T A+ A+ L + + ++
Sbjct: 355 LWERLAEAKSSVVEALAEDFDTPRAVSAVMNLVHHANRQLQPVSKGGEGARSPAVFAAIV 414
Query: 383 PIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSA-------- 428
+ GIE+ + + +E+L + R + F+ A
Sbjct: 415 SYIRDILDVFGIELLRSTETSASGLCGSLEGVVEQLTRFRSEVRA---FALARHDSPTEP 471
Query: 429 -------------DYIRKQLESKGFILE 443
D +R L G IL+
Sbjct: 472 GLHPERIPLLKACDALRNDLAPLGVILK 499
>gi|309803791|ref|ZP_07697877.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
gi|308164200|gb|EFO66461.1| cysteine--tRNA ligase [Lactobacillus iners LactinV 11V1-d]
Length = 357
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 148/362 (40%), Positives = 201/362 (55%), Gaps = 23/362 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KI+NTL K EF+ + MYVCGPTVY++ HIGNAR +I FD + R L Y E
Sbjct: 1 MKIFNTLSNKKEEFKPQIAGKVNMYVCGPTVYNYIHIGNARSVIAFDTIRRYLEYRGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y+ N TD+DDK+I +AR+E N +++ + + + FV DTT L T PR
Sbjct: 60 -VKYISNFTDVDDKMINQARKE------NVSVADLADRYIKAFVADTTALNIKPATFNPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
AT I +I I+ +I G+AY +N++ F YG S + IDE + V
Sbjct: 113 ATEEITDIISFIKVLIAKGYAYVVDNDVYFRAKKFTKYGCLSGQNIDELEEGASQHISVE 172
Query: 181 EKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
E+ K++ DF LWK E W SPWG+GRPGWHIECS MS+ YLG DIHGGG D
Sbjct: 173 EQKKKEDAIDFALWKGQKTLDEIAWNSPWGKGRPGWHIECSVMSTKYLGNTIDIHGGGQD 232
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE+AQS +K N W+HNGF+ + + KMSKS NFIT+++LL
Sbjct: 233 LQFPHHENELAQSEAKTG-QKFVNYWLHNGFVTVGEKQEKMSKSLNNFITVHDLL----- 286
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
+ V+R M YR+PI++T L +AE +L ++ + +
Sbjct: 287 --KKVDPQVLRFYMSSVQYRKPINYTEDGLRQAEAVLKRYKNILRNIKERLSEKNDVSDS 344
Query: 358 DL 359
DL
Sbjct: 345 DL 346
>gi|229176690|ref|ZP_04304094.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
gi|228606733|gb|EEK64150.1| Cysteinyl-tRNA synthetase [Bacillus cereus 172560W]
Length = 420
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 148/444 (33%), Positives = 216/444 (48%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIKFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLSEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ KE L + Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419
>gi|228919040|ref|ZP_04082419.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228956531|ref|ZP_04118327.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229040995|ref|ZP_04189758.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
gi|229107776|ref|ZP_04237412.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|229125607|ref|ZP_04254639.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|229142896|ref|ZP_04271337.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229148499|ref|ZP_04276755.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
gi|296500924|ref|YP_003662624.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|228634915|gb|EEK91488.1| Cysteinyl-tRNA synthetase [Bacillus cereus m1550]
gi|228640517|gb|EEK96906.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228657799|gb|EEL13605.1| Cysteinyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|228675625|gb|EEL30833.1| Cysteinyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228727292|gb|EEL78486.1| Cysteinyl-tRNA synthetase [Bacillus cereus AH676]
gi|228803096|gb|EEM49918.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|228840565|gb|EEM85827.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|296321976|gb|ADH04904.1| cysteinyl-tRNA synthetase [Bacillus thuringiensis BMB171]
Length = 420
Score = 278 bits (710), Expect = 2e-72, Method: Composition-based stats.
Identities = 148/444 (33%), Positives = 216/444 (48%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS------ 341
+++++ + + +IR ML HYR PI+F+ + L L +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 342 ------------TSKGIIDPA---VLSALYNDLNTVSAIQALHKLARESTKN-------- 378
I+ A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ KE L + Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KERNIILEDT------AQGTRWKR 419
>gi|323453109|gb|EGB08981.1| hypothetical protein AURANDRAFT_37286 [Aureococcus anophagefferens]
Length = 660
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 153/550 (27%), Positives = 227/550 (41%), Gaps = 106/550 (19%)
Query: 2 KKKIKIYNTLERKITEFQAIDP-SNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
K ++ IYN+L R F +DP + MYVCGPTVYD AH+G+AR + FDV+ R+LR
Sbjct: 24 KPQLMIYNSLTRSKVPFVPMDPLGKVITMYVCGPTVYDAAHLGHARTYLQFDVMRRILRD 83
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
G V YV N+TD+DDKII R+ + S + + F++D T L P
Sbjct: 84 ALGY-DVNYVMNVTDVDDKIIMRSAERGVS------PETLAREWEHAFLEDMTSLGVERP 136
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
T PR T ++P+++ ++ I+ +G AY + FDT + G + + E +
Sbjct: 137 TSMPRVTEYVPEIVAFVEKIVANGFAYADQGSVYFDTVAFGKAGYDYGKLVPESIGSAEL 196
Query: 180 PEKYH----------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ KK+P DF LWK S P EP W SPWG GRPGWHIECSAM + +G
Sbjct: 197 MAESEGKLGILLGGGKKDPRDFALWKASKPGEPTWPSPWGDGRPGWHIECSAMIDNTIGS 256
Query: 230 V--------FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
DIHGGG+DL FPHH+NE+AQ ++T N + H G L++ G KMSKS
Sbjct: 257 GGVGGAAGCIDIHGGGVDLRFPHHDNELAQGEAFCACKQTVNYFAHTGHLHIRGLKMSKS 316
Query: 282 NGNFITINELLETKK--FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
NFITI + L + G +RL + Y P D++ L A ++ K+ +
Sbjct: 317 LKNFITIGQALAGLEGVEGSEPVHPRTMRLMFCLVSYNAPCDYSDNMLANARVVEKKFKE 376
Query: 340 TSTS----------------------------KGIIDPAVLSALYNDLNTVSAIQALHKL 371
+ V + +D +T A+ AL L
Sbjct: 377 YFLNVAAALRPLDADPDSRQKLCAEDKELLAALKKAQDTVYARFLDDFDTPGAVLALQTL 436
Query: 372 ARESTKNHDL-------------------LPIFNASAHILGIE----------------- 395
++ + +LG+E
Sbjct: 437 VDTTSAYLQKFDAKQASRAVPCSLALCATARYVGETLDLLGLEGLCADDVLRRLKLTPSH 496
Query: 396 -----VCKEHLNKNISIAIEKLVQERLILLKM---KK----FSSADYIRKQ-LESKGFIL 442
+ + ++ + R + + D +R L + G L
Sbjct: 497 KPAAALGSGDAAAALGPLLDVIAAFRDDVRAAGREGDTQQVLALCDALRDDALPALGVRL 556
Query: 443 EDYKNPDNGQ 452
ED +
Sbjct: 557 EDKGAASVWK 566
>gi|85374564|ref|YP_458626.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
gi|84787647|gb|ABC63829.1| cysteinyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
Length = 500
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 161/513 (31%), Positives = 231/513 (45%), Gaps = 80/513 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R + EFQ I P R+Y CGPTVY++ HIGN R I D L R L + +
Sbjct: 6 LKLFNSLTRSLEEFQPIHPGEARVYTCGPTVYNYQHIGNMRAYIFADTLGRTLSWKGFDL 65
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
+V NITD+ DDK+ + A +E S I Q F D RL
Sbjct: 66 --KHVINITDVGHLTSDADAGDDKMEKAAAREGKSA------WDIARYYQQVFEADLDRL 117
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
P H PRAT+++ MI ++I H YE ++ + FD S++P YG +R DE +
Sbjct: 118 NIRKPEH-PRATDYVESMIAWAKSIEAK-HCYELDSGLYFDVSTVPEYGRLARAVTDEGE 175
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ E K+N ADF +W+++ P E W+SPWG+G PGWH+ECS MS+ LG F
Sbjct: 176 --GRIDEVEGKRNAADFAIWRKTPPGETRQMEWDSPWGKGAPGWHLECSVMSAELLGHPF 233
Query: 232 DIHGGGLDLIFPHHENEIAQSCCAD-RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIH GG+D HH NEIAQ+ + + A IW+HN FL KMSKS+G F+T+
Sbjct: 234 DIHTGGIDHREIHHPNEIAQNQAHNCSPDSGAKIWMHNNFLIDRRGKMSKSSGEFLTLQA 293
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ------------------------- 325
L++ R + R+ L HYR ++FT +
Sbjct: 294 LVD------RGFHPLAYRMLCLQAHYRSELEFTWEGLEAALVRLKRMVMALETLKARHAE 347
Query: 326 ------------RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LA 372
EA L G +A+ +DLNT ++ A+ LA
Sbjct: 348 LVSASMPNSKPWAQMEAWTLKQVQGDDWGKLGPAIEKFGTAIADDLNTAISLTAMEDLLA 407
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKN----ISIAI-----EKLVQERLILLKMK 423
+ L + +A +LG ++ + I E ER K
Sbjct: 408 TKKIDPAKKLVLASAFDAVLGFDLLNLSRTDLRTRPATAEISEAEIEAAFAERKEARAAK 467
Query: 424 KFSSADYIRKQLESKGFILEDY-KNPDNGQRMT 455
F+ +D IR L +KG + D +R T
Sbjct: 468 DFARSDAIRDDLAAKGVEVMDGDPLGWEWKRGT 500
>gi|260753260|ref|YP_003226153.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
gi|258552623|gb|ACV75569.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis NCIMB
11163]
Length = 516
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 154/522 (29%), Positives = 223/522 (42%), Gaps = 88/522 (16%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+N+L +KI F IDP +R+Y CGPTVY+FAH+GN R + D L R+L + V
Sbjct: 10 FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67
Query: 67 TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
+V NITD+ DDK+ A I + T+ F D L
Sbjct: 68 NHVINITDVGHLTSDSDTGDDKMEAAA------HKAQKTIWDVARFYTEAFWSDLKNLNI 121
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
PT AT+HI MI + I G Y+ ++ + FDTS + YG + + E +
Sbjct: 122 FNPTIWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGV 179
Query: 177 TRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
R+ KK+PADF LW+RS+P E W SPWG G PGWH+ECS MS YLG+ FDI
Sbjct: 180 GRIETVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDI 239
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTA--NIWIHNGFLNLEGRKMSKSNGNFITINEL 291
H GG+D HH NEIAQ+ ++ N W+HN FL KMSKS G+F+T++ L
Sbjct: 240 HTGGIDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTL 299
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------ 345
+E R+ L HYR ++F+ + A L +
Sbjct: 300 IEA------GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKK 353
Query: 346 ----------------------------------------IIDPAVLSALYNDLNTVSAI 365
I A+ NDL A+
Sbjct: 354 VVADGEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQAL 413
Query: 366 QALHK-LARESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQE 415
L + L + + + L + + ILG+ + + + L++E
Sbjct: 414 PLLEETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEE 473
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
R + K K F+++D IR +L G + D +P + W
Sbjct: 474 RQLKRKEKDFAASDAIRDRLSEAGIDVLDG-DPLGWEWRPEW 514
>gi|227537539|ref|ZP_03967588.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
gi|227242676|gb|EEI92691.1| cysteine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
Length = 390
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 137/399 (34%), Positives = 186/399 (46%), Gaps = 39/399 (9%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ + +YNT+ RK +F I PS + MYVCGPTVY H+GN R + FD+++R L +
Sbjct: 1 MENNLVLYNTISRKKEKFNPIHPSMVGMYVCGPTVYSDVHLGNCRTFVSFDLIFRYLLHL 60
Query: 61 YGEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V YVRNITD DDK ++A+ E I K T F
Sbjct: 61 GY--KVRYVRNITDAGHLEGDRDEGDDKFAKKAKLEQLE------PMEIVQKYTIGFHDV 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSR 167
L P+ +P AT HI + I +I+ II +G+AYE N + FD +Y +
Sbjct: 113 LRLFNTLPPSIEPTATGHISEQIEMIKQIIDNGYAYEVNGTVYFDVEKYVQKYDYTVLTN 172
Query: 168 RKIDEQKMGTRVPEKYHKKN-PADFILW-KRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
RK+++ TR +K DF LW K W +PW G PGWHIECSAMS+
Sbjct: 173 RKLEDLLNNTRELGGQDEKKGRLDFALWIKAKPEHIMRWPAPWSTGFPGWHIECSAMSNK 232
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
YLG FDIHGGG+DL HH NEIAQS + A W+H L + G +MSKS+GN
Sbjct: 233 YLGAQFDIHGGGMDLAATHHTNEIAQSEACNHTSP-ARYWMHTNMLTVNGARMSKSSGNG 291
Query: 286 ITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS--- 341
EL R + +R ML HYR +DF+ + L A+ +
Sbjct: 292 FLPQELFTGNHPLLERGYSPMAVRFFMLQAHYRSTLDFSNEALDAADKGFKRLMNAIALL 351
Query: 342 -----------TSKGIIDPAVLSALYNDLNTVSAIQALH 369
+ I +A+ +D N+ I
Sbjct: 352 NKITPSKATSGFNLEDIRKNCYAAMDDDFNSPILIAVTF 390
>gi|257051141|ref|YP_003128974.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
gi|256689904|gb|ACV10241.1| cysteinyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
Length = 496
Score = 277 bits (709), Expect = 2e-72, Method: Composition-based stats.
Identities = 141/508 (27%), Positives = 229/508 (45%), Gaps = 76/508 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++ NTL + F+ DP + +Y CG T D H+G+AR + DV++R L +
Sbjct: 1 MTLRVTNTLSGEREAFEPQDPDAVTLYYCGLTTSDPPHLGHARGWVHVDVMHRWLSWLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+++KI+ R + S + + Q ++D L
Sbjct: 61 D--VHHVENFTDVNEKIVARVGEVGGSE------ADVARTYIQDVIRDMRSLNLKRAEVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + H+P++I L++ +I G+AYEAN + FD ++ +YG S + ++E E+
Sbjct: 113 PRVSEHVPEIIDLVETLIDRGYAYEANGSVYFDVTAFEDYGELSNQTVEELDAQGDPDER 172
Query: 183 YHKKNPADFILWKR--STPMEPG-------------------WESPWGRGRPGWHIECSA 221
K++P DF LWK P + G W+SPWG+GRPGWHIECSA
Sbjct: 173 GEKRHPQDFALWKAGGVDPADIGAHRHADAAPAEDACRTAQTWDSPWGQGRPGWHIECSA 232
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS +LG+ DIH GG DL+FPHHENE+AQS A ++ AN W+H G L KMS S
Sbjct: 233 MSMTHLGETIDIHVGGQDLVFPHHENEVAQSEAATG-DRFANYWLHVGLLETGEEKMSSS 291
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF T+ + + + V+R +L T Y +T + L+EA +
Sbjct: 292 LGNFATVEDAIA-------EYGLGVVRTFLLSTAYHSRAAYTEETLSEATKRFETLERGY 344
Query: 342 TSK----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ A+ A+ +D NT A+ AL + ++
Sbjct: 345 ERAVEAADSVDATAKTTDDALREAVETVREAIPRAMNDDFNTREALAALVEFTSAVNRHV 404
Query: 380 D------------LLPIFNASA-HILGIEVCKEHLNKNI----SIAIEKLVQERLILLKM 422
D + +++ A +LG+ + + +E ++ R
Sbjct: 405 DEVEPYDYRGLRRAIDVYDEFAVGVLGLPLGDGGSDTGDVRLAEDLVELVLDVRAQERDA 464
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDN 450
+ AD +R +L + G ++D +
Sbjct: 465 GNYERADELRDELAALGVEVQDSDDGPT 492
>gi|301060756|ref|ZP_07201571.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
gi|300445153|gb|EFK09103.1| cysteine--tRNA ligase [delta proteobacterium NaphS2]
Length = 770
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 136/490 (27%), Positives = 227/490 (46%), Gaps = 58/490 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++YNT+ R+ +F I + + +Y CGPT+ + R ++ D++ R + Y
Sbjct: 303 KSGLRVYNTMTRRKEDFVPIKENQVTLYSCGPTLCQVVDLVQCRRLVFSDLITRYMVYRG 362
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V ++ N+TD+DD+ IE A++ S+ T F+KD L + T
Sbjct: 363 YD--VNHIMNVTDLDDRTIEGAQRAGVSL------KEFTDMFYNSFMKDLDSLNIIRATQ 414
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR + H+ MI L Q ++ G+AYE I FD S +YG S+ +++ ++G V
Sbjct: 415 YPRPSEHVDDMIELAQTLLEKGYAYEKLRSIYFDISRFKDYGKLSKIDLNKIRIGKTVDL 474
Query: 182 KYHK-KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++ +NP DF L KRST E +++ WG RPGWH+EC+A++ LG DIH
Sbjct: 475 DQYEKENPKDFTLLKRSTLNELKSGLFFKTKWGNIRPGWHLECAAIALKTLGPTHDIHTS 534
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+ L+FPHHEN IA S A AN W+HN + G + S+ +T+ +LL
Sbjct: 535 GVSLVFPHHENAIAISKAATGR-PLANYWLHNEPVMFNGP--NPSDDVKLTLRDLLT--- 588
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-------SKWPQTSTSKGIID- 348
+ IR +L HYR+PI F+ +L + K ++ D
Sbjct: 589 ---EGFKGREIRYWLLSRHYRKPIFFSHTKLAAVRNTIAHLDKFVQKIYFAKSTSEDPDL 645
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LPIFNASA 389
++A+ +D N +A+ AL + R D L
Sbjct: 646 DQTIYALKQGFVTAMDDDFNVAAALAALFQFTRNINLRMDQRGLSTSDREKTLAALTRIN 705
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LGI + + KL+++R + K + +AD++RK++E+ G + D +
Sbjct: 706 SVLGIMNLDPP---DSDAEVAKLIEKRELARSQKDWGTADHLRKEMEAMGIEVIDTPSGP 762
Query: 450 NGQRMTRWKQ 459
RW++
Sbjct: 763 ------RWRK 766
>gi|260772517|ref|ZP_05881433.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
gi|260611656|gb|EEX36859.1| cysteinyl-tRNA synthetase [Vibrio metschnikovii CIP 69.14]
Length = 397
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 149/416 (35%), Positives = 216/416 (51%), Gaps = 45/416 (10%)
Query: 70 RNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
RNITDIDDKII+RA + ++ +T + Q+ D L L P +PRAT +I
Sbjct: 2 RNITDIDDKIIKRASENQ------ESCDSLTERLIQEMYTDFDALNILRPDVEPRATAYI 55
Query: 130 PQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++I L++ +I G AY N +++F+ S YG S++ + + + G RV + K++P
Sbjct: 56 EEIIALVERLIDRGFAYVADNGDVMFEVSKFKEYGRLSKQDLTQLQAGARVDIETAKRSP 115
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF+LWK S P EP W+SPWG GRPGWHIECSAM+S LG FDIHGGG DL FPHHENE
Sbjct: 116 LDFVLWKMSKPGEPTWQSPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQFPHHENE 175
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
IAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L + + +R
Sbjct: 176 IAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL-------QHYDPETVR 227
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDL 359
++ HYR ++++ + LT+A L + SA+ +D
Sbjct: 228 YFLMSGHYRSQLNYSEENLTQARASLERLYTALRGLDMTVAAAGGEEYVSRFTSAMNDDF 287
Query: 360 NTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEH-------LNKN 404
NT A L +ARE + L + A ++GI + N +
Sbjct: 288 NTPEAYSVLFDMAREVNRLKTEDMLQASALGALMRELADVIGILYQEPERFLQSSVANDD 347
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+ IE L++ R K +++AD R +L G ILED N T W++K
Sbjct: 348 QAEEIEALIKLRNDSRANKDWANADLARHKLTEMGIILEDGPN------GTTWRRK 397
>gi|85057859|ref|YP_456775.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
AYWB]
gi|109894883|sp|Q2NIP7|SYC_AYWBP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|84789964|gb|ABC65696.1| cysteinyl-tRNA synthetase [Aster yellows witches'-broom phytoplasma
AYWB]
Length = 438
Score = 277 bits (708), Expect = 3e-72, Method: Composition-based stats.
Identities = 155/456 (33%), Positives = 218/456 (47%), Gaps = 36/456 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++IYN+L RK F+ P I +YVCGPTVY+ H+GN RP+I FD + R L +
Sbjct: 1 MLQIYNSLTRKKEFFKPDHPPQINIYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEML--K 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV NITDIDDKIIE S+ + +K + F L +P
Sbjct: 59 FKVYYVVNITDIDDKIIE------TSLKNQVLEKDLANKYIKSFNNLLETLNIQTINFKP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT +I MI IQ ++ G AY + I F S I +YG ++ + + K R
Sbjct: 113 QATQYINSMILYIQTLLDQGFAYFTDQGIYFRVSKITDYGKLKKQDLSQLKQNVRKQLDP 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+ P DFILWK+++ + SPW GRPGWH EC+ M DIHGGG DL FP
Sbjct: 173 QKEFPGDFILWKKTSQG-ITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A +K AN ++H L+ + +KMSKS GN I +LL + +
Sbjct: 232 HHENEIAQTH-AHSHQKLANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYN 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
+I+ +L THYR+PI+F+ + + + K T I
Sbjct: 284 PCIIKFLILSTHYRKPINFSYDLMEQTQQKYKKITYFLTKNNFYLKVNHFFCQTLDQDIM 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIF-NASAHILGIEVCKEHLNKNI 405
+ +D T I + ++ + + T+ D L F N+ IL V NK
Sbjct: 344 QLFHQLMQDDFATHKVIDLMEQIIKRAHQTQILDKLSQFQNSLLLILNTLVIAIPFNKPT 403
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++ K + F AD +RKQL KGFI
Sbjct: 404 KKDLQT-YFLWQDARKCRDFIQADILRKQLLDKGFI 438
>gi|195941732|ref|ZP_03087114.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi 80a]
Length = 480
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 144/497 (28%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R + D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L ++ L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|114052012|ref|NP_001039409.1| cysteinyl-tRNA synthetase, mitochondrial precursor [Bos taurus]
gi|115502846|sp|Q2KIF8|SYCM_BOVIN RecName: Full=Cysteinyl-tRNA synthetase, mitochondrial; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|86826764|gb|AAI12655.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Bos taurus]
Length = 555
Score = 276 bits (707), Expect = 4e-72, Method: Composition-based stats.
Identities = 150/518 (28%), Positives = 223/518 (43%), Gaps = 91/518 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YN+L R+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 45 KVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFG-CT 103
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII RA + ++ + + + + F +D L L PT R
Sbjct: 104 VVMVMGITDVDDKIIRRANE------MSVSPASLARLYEEDFKQDMAALKVLPPTAYLRV 157
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+PQ++ I+ +I +GHAY + FD S + + + P
Sbjct: 158 TEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGD---RYGKLVGVAPGPVGEPVDSD 214
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S G DIH GG+DL FPH
Sbjct: 215 KRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVDLAFPH 274
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + + N ++H+G L+++ G KMSKS N++TI + L RS
Sbjct: 275 HENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL-------RST 327
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----------------------LSKWPQT 340
V RL L + YR ID++ L EA L +
Sbjct: 328 SPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPIQEDVL 387
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
G AV +AL +D +TV A+ A+ L +
Sbjct: 388 WERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAVLGAVVA 447
Query: 384 IFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA--------- 428
+G+ + + + +E+LV+ RL + + F+ A
Sbjct: 448 SVEHFFETVGVSLAERQCVPGAGSPAALYSLVEELVRFRLKVRQ---FALASGEAPGEAR 504
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQ 452
D +R+ L G ++D +
Sbjct: 505 RQRLLERQPLLEACDALRRDLAVHGISIKDRSGSSTWE 542
>gi|241761347|ref|ZP_04759435.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
10988]
gi|241374254|gb|EER63751.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ATCC
10988]
Length = 516
Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats.
Identities = 154/522 (29%), Positives = 222/522 (42%), Gaps = 88/522 (16%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+N+L +KI F IDP +R+Y CGPTVY+FAH+GN R + D L R+L + V
Sbjct: 10 FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67
Query: 67 TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
+V NITD+ DDK+ A I + T+ F D L
Sbjct: 68 NHVINITDVGHLTSDSDTGDDKMEAAA------HKAQKTIWDVARFYTEAFWSDLKNLNI 121
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
PT AT+HI MI + I G Y+ ++ + FDTS + YG + + E +
Sbjct: 122 FNPTIWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGV 179
Query: 177 TRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
R+ KK+PADF LW+RS+P E W SPWG G PGWH+ECS MS YLG+ FDI
Sbjct: 180 GRIETVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDI 239
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTA--NIWIHNGFLNLEGRKMSKSNGNFITINEL 291
H GG+D HH NEIAQ+ ++ N W+HN FL KMSKS G+F+T++ L
Sbjct: 240 HTGGIDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTL 299
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------PQTST 342
+E R+ L HYR ++F+ + A L +
Sbjct: 300 IEA------GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKK 353
Query: 343 SKGIIDPAVLSALYNDLNTVS-------------------AIQALHKLA----------- 372
+P L A + AI L LA
Sbjct: 354 VVADGEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILELFDLAVSNDLMLPQAL 413
Query: 373 --------RESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQE 415
+ + + L + + ILG+ + + + L++E
Sbjct: 414 PLLEETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLDLLEE 473
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
R + K K F+++D IR +L G + D +P + W
Sbjct: 474 RQLKRKEKDFAASDAIRDRLSEAGIDVLDG-DPLGWEWRPEW 514
>gi|218249402|ref|YP_002375106.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|223888983|ref|ZP_03623574.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|224533521|ref|ZP_03674110.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|226321905|ref|ZP_03797431.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|226735049|sp|B7J2G1|SYC_BORBZ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|218164590|gb|ACK74651.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|223885799|gb|EEF56898.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|224513194|gb|EEF83556.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|226233094|gb|EEH31847.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|312148140|gb|ADQ30799.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi JD1]
Length = 480
Score = 276 bits (706), Expect = 5e-72, Method: Composition-based stats.
Identities = 144/497 (28%), Positives = 226/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R + D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C + ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIAECFLDNK-WCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|298711628|emb|CBJ32684.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 663
Score = 276 bits (705), Expect = 6e-72, Method: Composition-based stats.
Identities = 141/535 (26%), Positives = 223/535 (41%), Gaps = 101/535 (18%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R T F D + + Y+CGPTVY +H+G+AR + FD+L R++ +
Sbjct: 40 LKVFNSLTRTKTRFVPKDSNRVLWYMCGPTVYAPSHMGHARTYLHFDILRRVMTD-FFGY 98
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V+ NITDIDDKII RA + + + + +++D L APT R
Sbjct: 99 DVSLCMNITDIDDKIITRANEGG------QNYRELAAHFEEDYMQDMALLGVRAPTVVTR 152
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN----------YGSFSRRKIDEQK 174
+ IP+++ IQ II +G+AYE+N + F+ S ++ +
Sbjct: 153 VSEFIPEVVEYIQGIIDNGYAYESNGSVYFNVQSFEGKKGHAYAKLLPEGVGNGELMAEG 212
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH----YLGKV 230
G K++ DF LWKRS EP W SPWG GRPGWHIECS M+S
Sbjct: 213 EGALSLGAGDKRSSGDFALWKRSREGEPSWPSPWGDGRPGWHIECSVMASATFEGMGDGT 272
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIH GG+DL FPHH+NE+AQ+ + N ++H G L+++G KMSKS NFITI +
Sbjct: 273 MDIHSGGVDLKFPHHDNEMAQAEAKYDCCQWVNYFLHTGHLHIKGFKMSKSLKNFITIKQ 332
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------- 343
L+ IRL L+ Y P+D+ ++ A + + +
Sbjct: 333 ALQEN-------SPRQIRLLFLLHKYNTPMDYGDDAMSGALAAERTFSEFFHNVKAALRR 385
Query: 344 -------------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---- 380
V L +D++T A+ AL +L + K +
Sbjct: 386 TTARDPARTKEPELALMSSLSDAKKEVKKCLCDDVDTPGAMGALQELVKNVNKYIEAKER 445
Query: 381 ------------LLPIFNASAHILGI-----------------------EVCKEHLNKNI 405
+ G+ E + +
Sbjct: 446 AGEPIVADCVRGAAEYVTKIFKVFGLASPGPALGFSQVGDAGVGGDASGEGGEASREAIL 505
Query: 406 SIAIEKLVQERLILL---KMKK----FSSADYIRKQLE-SKGFILEDYKNPDNGQ 452
++ L + R + + ++ D++R++L G LED + +
Sbjct: 506 GPVLDVLSEFRDKVRGCGRAGDTKGVLAACDHVREELLPGVGVRLEDKGDQAVWK 560
>gi|56551082|ref|YP_161921.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
gi|61216128|sp|Q5NR44|SYC_ZYMMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56542656|gb|AAV88810.1| cysteinyl-tRNA synthetase [Zymomonas mobilis subsp. mobilis ZM4]
Length = 516
Score = 276 bits (705), Expect = 7e-72, Method: Composition-based stats.
Identities = 154/522 (29%), Positives = 223/522 (42%), Gaps = 88/522 (16%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+N+L +KI F IDP +R+Y CGPTVY+FAH+GN R + D L R+L + V
Sbjct: 10 FFNSLSKKIENFTPIDPERVRLYSCGPTVYNFAHLGNLRAYVFTDSLRRMLNWKGY--PV 67
Query: 67 TYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
+V NITD+ DDK+ A I + T+ F D L
Sbjct: 68 NHVINITDVGHLTSDSDTGDDKMEAAA------HKAQKTIWDVARFYTEAFWSDLKNLNI 121
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
PT AT+HI MI + I G Y+ ++ + FDTS + YG + + E +
Sbjct: 122 FNPTIWSIATDHIEDMIAFARKIEEAGFTYQLDSGLYFDTSRLKEYGLLAGHR--EAEGV 179
Query: 177 TRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
R+ KK+PADF LW+RS+P E W SPWG G PGWH+ECS MS YLG+ FDI
Sbjct: 180 GRIETVAGKKHPADFALWRRSSPDEKRQMEWISPWGPGAPGWHLECSVMSMKYLGEQFDI 239
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTA--NIWIHNGFLNLEGRKMSKSNGNFITINEL 291
H GG+D HH NEIAQ+ ++ N W+HN FL KMSKS G+F+T++ L
Sbjct: 240 HTGGIDHREIHHCNEIAQNQAFTGDQQKTGANFWLHNNFLVDRSGKMSKSKGSFLTLSTL 299
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------ 345
+E R+ L HYR ++F+ + A L +
Sbjct: 300 IEA------GIHPLAYRVLCLSAHYRSELEFSPDNILAALTRLKRLVIAVGQLKKKVQKK 353
Query: 346 ----------------------------------------IIDPAVLSALYNDLNTVSAI 365
I A+ NDL A+
Sbjct: 354 VVADGEPDWLRAFDERSFSKGAPLDYQRGLIEAPLKKEALAILERFDQAVSNDLMLPQAL 413
Query: 366 QALHK-LARESTKNHDLLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQE 415
L + L + + + L + + ILG+ + + + L++E
Sbjct: 414 PLLEETLGNKKLQPEEQLRLIASMDMILGLNLLHLDRASLNIRPKNASLQENNVLALLEE 473
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
R + K K F+++D IR +L G + D +P + W
Sbjct: 474 RQLKRKEKDFAASDAIRNRLSEAGIDVLDG-DPLGWEWRPEW 514
>gi|218508011|ref|ZP_03505889.1| cysteinyl-tRNA synthetase [Rhizobium etli Brasil 5]
Length = 245
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 151/241 (62%), Positives = 187/241 (77%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K+YNTL R+ + F IDP N+RMYVCGPTVYDFAHIGNARP+IVFDVL+RLLR+ YG
Sbjct: 5 PELKLYNTLTREKSVFAPIDPKNVRMYVCGPTVYDFAHIGNARPVIVFDVLFRLLRHVYG 64
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VTY RNITD+DDKI RA ++HP +P+N+AI +T K QF D L CL P +
Sbjct: 65 ENHVTYARNITDVDDKINARALRDHPGLPLNEAIRAVTEKTETQFHADVAELGCLEPNVE 124
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT++I +MI +I+ +I +GHAY A+ E++FDT S+ +YG S+R +DEQ+ G RV
Sbjct: 125 PRATDNIEEMIEIIEKLISNGHAYAASGEVLFDTKSMADYGQLSKRPLDEQQAGARVAVD 184
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
HKKNP DF+LWK S+ EPGW+SPWGRGRPGWHIECSAMS YLG +FDIHGGGLDLIF
Sbjct: 185 AHKKNPGDFVLWKLSSHNEPGWDSPWGRGRPGWHIECSAMSRRYLGDIFDIHGGGLDLIF 244
Query: 243 P 243
P
Sbjct: 245 P 245
>gi|300711054|ref|YP_003736868.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
gi|299124737|gb|ADJ15076.1| cysteinyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
Length = 495
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 142/509 (27%), Positives = 224/509 (44%), Gaps = 73/509 (14%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + NTL + EF+ + +YVCG TV D AH+G+AR + DV+ R L +
Sbjct: 1 MLSVTNTLSDEREEFRP-TGDEVLVYVCGLTVSDDAHLGHARVWVHADVMCRWLSHEG-- 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V N TD+++KI R + + + + + ++D L T P
Sbjct: 58 HAVRHVENFTDVNEKIAAR----IDEGDLGGSELGVARRFIEGTLEDMRGLNLQRATVYP 113
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + H+P+++ LI+ ++ GHAYE++ + FD ++ YG S +++ + + E+
Sbjct: 114 RVSEHVPEILALIERLLESGHAYESDGSVYFDVTTFEEYGKLSNQRVTDLEAQGDPTERS 173
Query: 184 HKKNPADFILWK-----------------RSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
K+NPADF LWK P W+SPWG GRPGWHIECSAM+ +
Sbjct: 174 EKRNPADFALWKAGGVSESAIRDHEKVDHAHPPDGETWDSPWGEGRPGWHIECSAMAMTH 233
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
L + DIH GG DL+FPHHENEIAQS A + AN W+H G L +G KMS S GNF
Sbjct: 234 LDETIDIHVGGHDLVFPHHENEIAQSEAATG-KPFANYWLHTGLLETDGEKMSSSLGNFF 292
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-- 344
T++ L+ + V+R L T Y F+ + EA+ + +
Sbjct: 293 TVSAALD-------EFGPDVLRSFYLATEYGSNQTFSEDAMAEAKERYERLERAYERAIE 345
Query: 345 --------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ A+ +D A+ AL +LA ++ D
Sbjct: 346 AADGPDARTKIEDHELRAAIEEARGEFVRAMNDDFGVREAMSALLELAGALNRHLDAREE 405
Query: 385 FNASA-------------HILGIEVCKEHLNKNI--SIAIEKLVQERLILLKMKKFSSAD 429
++ A I G + +E +++ R + + AD
Sbjct: 406 YDYRALRRAIETIEGFGGEIFGFSFGSGAGDGVDLAGDLVELVLEVREAEREAGNYERAD 465
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+R+ LE+ G +ED T ++
Sbjct: 466 ALREDLEALGVTVEDEAEG----EGTTYR 490
>gi|221218126|ref|ZP_03589592.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|221192074|gb|EEE18295.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 72a]
Length = 480
Score = 275 bits (704), Expect = 8e-72, Method: Composition-based stats.
Identities = 145/497 (29%), Positives = 227/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R + D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|306836885|ref|ZP_07469840.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304567226|gb|EFM42836.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 374
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 135/391 (34%), Positives = 197/391 (50%), Gaps = 31/391 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++I++T R +F+ I P + +Y+CG T HIG+ R + FD+L R L
Sbjct: 1 MNTLRIFDTATRSQRDFEPIRPGHASIYLCGATPQAQPHIGHLRSGVAFDILRRWLLAQG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V VRN+TDIDDKI+ +A + N S ++F K L L P+
Sbjct: 61 YD--VALVRNVTDIDDKILTKAAEN------NRPWWEWVSTYEREFTKAYNLLGVLPPSV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQKM 175
+PRAT + QM+ +Q +I G AY + FD + + ++
Sbjct: 113 EPRATGFVTQMVEYMQRLIDAGFAYPVPAPDGAAGSVYFDVEAWTKAEGSDYGALSGNRV 172
Query: 176 GTRVPEKYHK---KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ ++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS++YLG FD
Sbjct: 173 EEMEQGESDNAGKRSPLDFALWKAAKPGEPSWPTPWGRGRPGWHLECSAMSTYYLGSNFD 232
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GGLDL FPHHENEIAQS A +K AN W+HN ++ + G KMSKS GN ++I+ +L
Sbjct: 233 IHCGGLDLQFPHHENEIAQSHAAG--DKFANYWMHNHWVTMAGEKMSKSLGNVLSISNML 290
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGII 347
E + +R + HYR ++++ LTEA + +G
Sbjct: 291 ELVR-------PVELRYYLGSAHYRSVLEYSESALTEAAAGYRRIEGFVKRFAGVERGDW 343
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
P A+ +D+ A+ A+H R K+
Sbjct: 344 TPDFEDAMNDDIAVPKALAAIHTTVRAGNKD 374
>gi|119953383|ref|YP_945592.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
gi|254765179|sp|A1R030|SYC_BORT9 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119862154|gb|AAX17922.1| cysteinyl-tRNA synthetase [Borrelia turicatae 91E135]
Length = 481
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 146/498 (29%), Positives = 225/498 (45%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YNT + ++E + I++Y CGPTVY++AHIGN R I D+L + LR
Sbjct: 1 MLLRLYNTKTKSLSEVKNFSD--IKVYACGPTVYNYAHIGNFRTYIFEDLLIKSLRLL-- 56
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V Y NITDI +DK+++ AR+ ++ I+ T+ F D
Sbjct: 57 KYNVNYAMNITDIGHLTGEFDEGEDKVVKAARERGLTVY------EISRFFTEAFFCDCE 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ +I MI +I+ + +G Y N + FDTS +YG + +++
Sbjct: 111 KLNIVRPDKVLIASEYIASMIEVIKVLEQNGFTYFVNGNVYFDTSLFKSYGQMAGINLND 170
Query: 173 QK--MGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ +RV KKN +DF+LW + E W+SPWG G P WH+EC+AM+
Sbjct: 171 FEFSSVSRVEVDPSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLDCF 230
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
DIH GG+D I HH NEIA + C +I++H FL +E KMSKSN NFIT
Sbjct: 231 RSTLDIHLGGVDHIGVHHINEIAIAECYLNR-MWCDIFVHGEFLIMEDEKMSKSNNNFIT 289
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----SKWPQTSTS 343
I +L + R L HYR + FT L ++ +K +S
Sbjct: 290 IQDL------ETNGFSPLDFRYFCLTAHYRTQLKFTFNNLRACKVARKNMLNKLTAVFSS 343
Query: 344 KGIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLL 382
D + L + DL+ A+ L + ++ L
Sbjct: 344 LNQFDLLLLSKNYENIESVLEKRYYDSFLEKIAFDLSIPQALALLWDIIKDDNLSALSKL 403
Query: 383 PIFNASAHILGIEVCK------EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +L + + + E NI A+ L++ER + K F AD IR+
Sbjct: 404 RLTFKFDEVLSLGLKEGVFREIEKDRINIDDAMNSLLEERRLAKIRKDFKRADEIREYFY 463
Query: 437 SKGFILEDYKNPDNGQRM 454
SKGF+L D + +R
Sbjct: 464 SKGFVLIDTEEGTKVKRG 481
>gi|292655283|ref|YP_003535180.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
gi|291370540|gb|ADE02767.1| cysteinyl-tRNA synthetase [Haloferax volcanii DS2]
Length = 494
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 148/505 (29%), Positives = 221/505 (43%), Gaps = 72/505 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + EF++ + +YVCG TV D AH+G+AR + D+++R L Y
Sbjct: 1 MTLSVTNTLTGEREEFES-HGDEVLLYVCGLTVSDHAHLGHARLWMHADLMHRWLDYEGY 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+++KI R + D + + ++D L
Sbjct: 60 D--VRHVENFTDVNEKIAAR----IGEDDLGDDEAGVAEHFVGDVIRDMRGLNLKRAEVY 113
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + HIP++I L+Q ++ GHAYE+N + FD S+ +YG S +K++E + E+
Sbjct: 114 PRVSEHIPEIIDLVQTLVDRGHAYESNGSVYFDVSTFDDYGKLSNQKLEELESRATKDER 173
Query: 183 YHKKNPADFILWKR-------------------STPMEPGWESPWGRGRPGWHIECSAMS 223
K+NP DF LWK P WESPWG GRPGWHIECSAMS
Sbjct: 174 SEKRNPTDFALWKAGAVDPKTAAEHRDPDLEPLHAPCGETWESPWGEGRPGWHIECSAMS 233
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+LG DIH GG DL+FPHHENEIAQS A ++ A W+H G L EG KMS S G
Sbjct: 234 MTHLGDTLDIHVGGRDLVFPHHENEIAQSEAATG-QQFARYWLHVGLLQTEGDKMSSSLG 292
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
NF T+ + L+ + A VIR L T Y ++ + + EAE + + +
Sbjct: 293 NFFTVGDALD-------EFGADVIRTFYLSTAYGSEQTYSAETIAEAEERWERLERAYEA 345
Query: 344 K----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTK---- 377
A+ +D N A+ L LA +
Sbjct: 346 AVDAVDSPDARTKVEATDLRDTVTETRENFREAMNDDFNVREAMAELLGLAGAVNRHVAD 405
Query: 378 -----NHDLLPIFNAS----AHILGIEVCKEHLNKNI---SIAIEKLVQERLILLKMKKF 425
L A + G+ ++ ++ ++ R + +
Sbjct: 406 ADEYDYRALRRAVEAFEDLGGEVFGLSFGDAGEGGDVSVAEDLVQLVLDVREAEREAGNY 465
Query: 426 SSADYIRKQLESKGFILEDYKNPDN 450
AD +R L + G +ED +
Sbjct: 466 ERADDLRDDLTALGVDVEDGPDGAT 490
>gi|228898843|ref|ZP_04063125.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|228963190|ref|ZP_04124359.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228796448|gb|EEM43887.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228860743|gb|EEN05121.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
Length = 420
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 147/444 (33%), Positives = 216/444 (48%), Gaps = 57/444 (12%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
+VFD + R L Y + V YV N TD+DDK+I+ A + +P I + + +
Sbjct: 1 MVFDTVRRYLEYKGYD--VQYVSNFTDVDDKLIKAANELGEDVPT------IADRFVEAY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
+D T L C T PR T ++ +I IQ ++ G+AYE+ ++ F T YG S
Sbjct: 53 FEDVTALGCKHATVHPRVTENMDIIIEFIQELVNKGYAYESEGDVYFKTKEFEGYGKLSH 112
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ I + + G R+ K++P DF LWK + E WESPWG+GRPGWHIECSAM+ YL
Sbjct: 113 QPIADLRHGARIEVGEKKQDPLDFALWKAAKEGEIFWESPWGQGRPGWHIECSAMARKYL 172
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS GNFI
Sbjct: 173 GDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKSLGNFIL 231
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
+++++ + + +IR ML HYR PI+F+ + L L + +
Sbjct: 232 VHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAYGNLKHR 284
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------- 378
A A+ +D NT +AI L+ +A + +
Sbjct: 285 MESSTDLTDHNEKWLVEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSK 344
Query: 379 ---HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ILG+E+ +E L + Q+R+ K + F+ +D IR L
Sbjct: 345 VVIEAYVKQLETLFDILGLELTQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDL 401
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
+ + ILED + TRWK+
Sbjct: 402 KGRNIILEDT------AQGTRWKR 419
>gi|296481581|gb|DAA23696.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Bos
taurus]
Length = 555
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 150/518 (28%), Positives = 222/518 (42%), Gaps = 91/518 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YN+L R+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 45 KVYNSLTRRKDPLIVSRADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILSRVFG-CT 103
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII RA + ++ + + + + F +D L L PT R
Sbjct: 104 VVMVMGITDVDDKIIRRANE------MSVSPASLARLYEEDFKQDMAALKVLPPTAYLRV 157
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T H+PQ++ I+ +I +GHAY + FD S + + + P
Sbjct: 158 TEHVPQIVAFIERLIANGHAYCTAKGNVYFDLQSRGD---RYGKLVGVAPGPVGEPVDSD 214
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P EP W SPWG GRPGWHIECS ++S G DIH GG+DL FPH
Sbjct: 215 KRHTSDFALWKAAKPQEPFWGSPWGDGRPGWHIECSTIASLVFGSQLDIHSGGVDLAFPH 274
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + + N ++H+G L+++ G KMSKS N++TI + L RS
Sbjct: 275 HENEIAQCEAFHQCPQWGNYFLHSGHLHVKGGGEKMSKSLKNYVTIKDFL-------RST 327
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEIL----------------------LSKWPQT 340
V RL L + YR ID++ L EA L +
Sbjct: 328 SPDVFRLFCLRSSYRSAIDYSEGALLEARSLLRATAAFVEDARAYLRGQLAGGPIQEDVL 387
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----------------P 383
G AV +AL +D +TV A+ A+ L +
Sbjct: 388 WERLGRTKAAVQAALADDFDTVRAVDAVMDLVHHGNRQLKAASEEPRGPRSPAVLGAVVA 447
Query: 384 IFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSA--------- 428
+G+ + + + +E+LV RL + + F+ A
Sbjct: 448 SVEHFFETVGVSLAERQCVPGAGSPAALHSLVEELVCFRLKVRQ---FALASGEAPGEAR 504
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQ 452
D +R+ L G ++D +
Sbjct: 505 RQRLLERQPLLEACDALRRDLAVHGISIKDRSGSSTWE 542
>gi|225549500|ref|ZP_03770466.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|225369777|gb|EEG99224.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 118a]
Length = 480
Score = 275 bits (703), Expect = 1e-71, Method: Composition-based stats.
Identities = 145/497 (29%), Positives = 227/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R + D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYVFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNIAQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|28493314|ref|NP_787475.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
gi|28572575|ref|NP_789355.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|61216626|sp|Q83GF1|SYC1_TROWT RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
Full=Cysteine--tRNA ligase 1; Short=CysRS 1
gi|61216630|sp|Q83HS8|SYC1_TROW8 RecName: Full=Cysteinyl-tRNA synthetase 1; AltName:
Full=Cysteine--tRNA ligase 1; Short=CysRS 1
gi|28410707|emb|CAD67093.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|28476355|gb|AAO44444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
Length = 466
Score = 275 bits (702), Expect = 1e-71, Method: Composition-based stats.
Identities = 150/487 (30%), Positives = 214/487 (43%), Gaps = 56/487 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+TL R+I D + +YVCGPTV HIG+ R +V+D L R L Y
Sbjct: 1 MTLNLYDTLSRRIVTLDCRD--RVELYVCGPTVQSPPHIGHMRSGVVYDCLRRWLEYKG- 57
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITDIDDKI+ AR S + I + + F + L P ++
Sbjct: 58 -LPVLYVRNITDIDDKILASAR----STETGETWWQIAYRVSGLFNEAYKALFVKPPDYE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
P T HIP +I I+ +I AY A + F P+YG + +K
Sbjct: 113 PLVTAHIPDIIKAIEILIQKNVAYRAMDGSGNVFFSIDKHPSYGELTDQKDL----LIDD 168
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF LWK +P WESPWG GRPGWHIECS M++ YLG F IHGG
Sbjct: 169 CITPGKRDPRDFTLWKEKKDTDPDLAFWESPWGPGRPGWHIECSVMATKYLGTRFAIHGG 228
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G+DL FPHHENE+AQ+ A+IW+H G +N+EG KMSKS GN + + + L
Sbjct: 229 GVDLRFPHHENELAQARALG--AHFADIWMHTGAVNVEGIKMSKSFGNSVLVQDALS--- 283
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQTS 341
+R L HYR +++T L++A +K +
Sbjct: 284 ----KVSPSALRYYFLTAHYRSTLNYTENSLSQACNTWNKLQGCIYRVYDYLEREGYEND 339
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-------ILGI 394
++ ++L NDLN A+ +H RE + D + +L I
Sbjct: 340 FCVSQLNTDFSTSLDNDLNIPEALAIVHNKVREMNRLVDTQADMQYLGNTLSEVVEMLSI 399
Query: 395 E-------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
N ++ L++ R F ++D +R+ L + D
Sbjct: 400 LCPIDHKITYTSGAQDNSKALLQVLLEARDRARSKGDFYTSDLLRELLAEADISVSDGHV 459
Query: 448 PDNGQRM 454
R
Sbjct: 460 SYGSPRG 466
>gi|216264257|ref|ZP_03436249.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|215980730|gb|EEC21537.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 156a]
Length = 480
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 146/497 (29%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K +I++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L ++ L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|148553156|ref|YP_001260738.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
gi|148498346|gb|ABQ66600.1| cysteinyl-tRNA synthetase [Sphingomonas wittichii RW1]
Length = 510
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 149/511 (29%), Positives = 214/511 (41%), Gaps = 79/511 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++L R F IDP+ +R+Y CGPTVY+FAH+GN R + D L R L +
Sbjct: 11 LMLFDSLTRSTRAFAPIDPAMVRLYSCGPTVYNFAHLGNLRAYVFTDTLRRTLNWKGW-- 68
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V NITD+ DDK+ E + I I + T F D L
Sbjct: 69 PVNHVINITDVGHLTSDADEGDDKM------EAAAKKAARTIWEIAAFYTDAFKADLRDL 122
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
+APT AT+HI MI + I G +YE + + FDTS +P+YG + + DE
Sbjct: 123 NIIAPTLWSVATDHIQDMIAFARTIEAAGASYELDGGLYFDTSKVPDYGRLAGARGDE-- 180
Query: 175 MGTRVPEKYHKKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ E K+N ADF LW+RS + W SPWG G PGWH+ECS MS YLG F
Sbjct: 181 TVGRIAEVEGKRNAADFALWRRSATGEQRQMEWMSPWGPGAPGWHLECSVMSMKYLGSQF 240
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
DIH GG+D HH NEIAQ+ AN W+HN FL G KMSKS G F T+
Sbjct: 241 DIHTGGIDHREIHHCNEIAQNQAFTGTAASGANFWMHNNFLVDRGGKMSKSKGGFATLAG 300
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--KGIID 348
+++ + RL L HYR ++F+ + L A L++ + D
Sbjct: 301 VID------KGVHPLAYRLLCLSAHYRSELEFSPEALASALTRLTRLVLAAQQLRDKAGD 354
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNI--- 405
P L + + A A + E+ + L ++ +
Sbjct: 355 PDWLRLIDETGASKGASFAYQRSVVEAGLGAKAHALIVQFDEALSNDLMVPQTLPLLETA 414
Query: 406 --------------------------------------------SIAIEKLVQERLILLK 421
IE L+++R
Sbjct: 415 IADKAIPAEERLRLLASMDLALGLGLLRLRRVDLRLRPADARIGDDEIEALIEQRQAARA 474
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
K ++++D IR +L +G + D
Sbjct: 475 DKDYAASDRIRDELAERGVSVMDGAGDMRWD 505
>gi|312149265|gb|ADQ29336.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi N40]
Length = 480
Score = 275 bits (702), Expect = 2e-71, Method: Composition-based stats.
Identities = 146/497 (29%), Positives = 227/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKGYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K +I++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----ILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L ++ L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARGNLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|225552408|ref|ZP_03773348.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
gi|225371406|gb|EEH00836.1| cysteinyl-tRNA synthetase [Borrelia sp. SV1]
Length = 480
Score = 274 bits (701), Expect = 2e-71, Method: Composition-based stats.
Identities = 145/497 (29%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLIASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIAECFLD-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVSQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|325000166|ref|ZP_08121278.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
Length = 440
Score = 274 bits (700), Expect = 2e-71, Method: Composition-based stats.
Identities = 153/467 (32%), Positives = 220/467 (47%), Gaps = 73/467 (15%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
MYVCG TV HIG+ R + +DVL R L + VT VRN+TDIDDKI+ ++
Sbjct: 2 SMYVCGATVQGLPHIGHVRSGLNYDVLRRWLGRSGYD--VTLVRNVTDIDDKILRKSEAA 59
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + F L CL P+ +PRAT HI QM+ LI+ +I GHAY
Sbjct: 60 G------RPWWEWAATHERAFTAAYDALGCLPPSVEPRATGHITQMVELIERLIERGHAY 113
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
AN ++ F ++P YG+ S +K+D+ G K++P DF LWK + P EP W +
Sbjct: 114 AANGDVYFAVRTMPEYGTLSGQKVDDVHQGEGEAGD--KRDPLDFTLWKAAKPGEPSWPT 171
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWH+ECSAM++ YLG FDIHGGGLDL+FPHHENE AQS A + A W+
Sbjct: 172 PWGHGRPGWHLECSAMATAYLGPEFDIHGGGLDLVFPHHENERAQSHAAG--DPFARFWL 229
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
HN ++ + G KMSKS GN + I LL+ + +R ++ HYR I+++
Sbjct: 230 HNAWVTMGGEKMSKSLGNTLAIEALLQRVR-------PVELRYYLVGPHYRSAIEYSDAA 282
Query: 327 LTEAEILLSKWPQT----------STSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
L EA + + +AL +DL T A+ A+HKL RE
Sbjct: 283 LDEAVAAYRRVESFVNRVRERHGLPEPSTELPAEFTAALDDDLGTPIALGAVHKLVREGN 342
Query: 377 KNHD---------LLPIFNASAHILGIEVC---------KEHLNKNISIAIEKLVQ---- 414
D A+ +LG++ + + + +E +++
Sbjct: 343 TALDAGDARTASQAASCVRATTGVLGLDPLAAGGAADNAGDAARQALGTLVESMLERRQA 402
Query: 415 ---------ERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
D +R +L + G +ED
Sbjct: 403 ARARRDFATA-------------DRLRDELLAAGIAVEDGAGGSTWT 436
>gi|39938627|ref|NP_950393.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
gi|61216243|sp|Q6YR75|SYC_ONYPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|39721736|dbj|BAD04226.1| cysteinyl-tRNA synthetase [Onion yellows phytoplasma OY-M]
Length = 438
Score = 273 bits (698), Expect = 4e-71, Method: Composition-based stats.
Identities = 160/456 (35%), Positives = 220/456 (48%), Gaps = 36/456 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L RK F P I MYVCGPTVY+ H+GN RP+I FD + R L
Sbjct: 1 MLKIYNSLTRKKEFFNPAHPPQINMYVCGPTVYNHLHLGNTRPLIFFDTVKRYLEMLNF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV NITDIDDKIIE A + + +K + F L +P
Sbjct: 60 -RVYYVVNITDIDDKIIENALKNQV------LEQDLANKYIKSFNNLLKTLNIQTINFKP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT +I MI IQ ++ G AY + I F S I +YG ++ + + K R
Sbjct: 113 QATQYINSMIVYIQTLLDQGFAYFTDQGIYFRVSKIDDYGKLKKQDLSQLKQNARKQLDP 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+ P DFILWK+++ + SPW GRPGWH EC+ M DIHGGG DL FP
Sbjct: 173 QKEFPGDFILWKKTSQG-ITYPSPWFAGRPGWHTECATMIEQLFKLPLDIHGGGTDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ+ A +K AN ++H L+ + +KMSKS GN I +LL + +
Sbjct: 232 HHENEIAQTH-AHSHQKLANFFMHVERLDYQNQKMSKSLGNIIWCKDLL-------KQYN 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IID 348
+I+L +L THYR+PI+F+ + +A+ K T I
Sbjct: 284 PCIIKLLILSTHYRKPINFSYDLMEQAQQKYQKITDFLTKNNFYLKVNQFSCQALDQDIM 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLARES--TKNHDLLPIF-NASAHILGIEVCKEHLNKNI 405
+ +DL T I + + +++ T+ D L F N+ IL I NK
Sbjct: 344 QLFHQLMQDDLATHKVIDLMEQTIKQAHQTQILDKLSQFQNSLLLILNILGITIPFNKPT 403
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++ K + F+ AD +RKQL KGFI
Sbjct: 404 KTDLQT-YFLWQDARKYRDFAQADILRKQLLDKGFI 438
>gi|296188978|ref|XP_002742588.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
[Callithrix jacchus]
Length = 565
Score = 273 bits (698), Expect = 5e-71, Method: Composition-based stats.
Identities = 144/524 (27%), Positives = 222/524 (42%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 52 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNI 111
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 112 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 164
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ++ I+ II GHAY + FD S + P
Sbjct: 165 TENIPQIVSFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVSVAPG---PAGEPADSD 221
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P+DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 222 KRHPSDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 281
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L++ + KMSKS N++TI + L +++
Sbjct: 282 HENEIAQCEVFHQCEQWGNYFLHSGHLHMKGKEEKMSKSLKNYVTIKDFL-------KTF 334
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
+ RL L + YR ID++ + + +
Sbjct: 335 SPDIFRLFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLASGSVREVML 394
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL +D +T S + A+ L ++
Sbjct: 395 WERLSSTKRAVRAALADDFDTPSVLDAILGLVHHGNGELRATPKEPGGPRSPAVFGAIIS 454
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA--------- 428
F +GI + + +++LV+ R + + F+ A
Sbjct: 455 YFEQFFETVGISLANQQCVSGDGGEATLRGVVDELVRFRQQVRQ---FALATPEATGEAQ 511
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + W+
Sbjct: 512 RQQRLERQPLLEACDTLRRGLTAHGINIKDRSQTTS-----TWE 550
>gi|226320825|ref|ZP_03796378.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
gi|226233767|gb|EEH32495.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 29805]
Length = 480
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 145/497 (29%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKNTYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|219685228|ref|ZP_03540048.1| cysteine--tRNA ligase [Borrelia garinii Far04]
gi|219673324|gb|EED30343.1| cysteine--tRNA ligase [Borrelia garinii Far04]
Length = 480
Score = 273 bits (697), Expect = 5e-71, Method: Composition-based stats.
Identities = 147/497 (29%), Positives = 230/497 (46%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT R +E + +N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTRDFSELA--NFANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISKFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVVYPDKVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS+GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L E +++ R L +HYR + F+ L E ++++ S
Sbjct: 290 KDLEE------QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLP 383
D + + + DLN + L ++ + L
Sbjct: 344 DPADLNMLNKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLK 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L K+ + ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLIDTKEGTKVKRG 480
>gi|110667612|ref|YP_657423.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
gi|109625359|emb|CAJ51782.1| cysteine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
Length = 497
Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats.
Identities = 147/500 (29%), Positives = 222/500 (44%), Gaps = 73/500 (14%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + NTL + EF+ + +YVCG TV D AH+G+AR + D+++R L Y
Sbjct: 1 MTLSVTNTLTGEREEFEP-RGDEVLLYVCGLTVSDHAHLGHARLWVHADIMHRWLEYQGY 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V N TD+++KI+ R + + + + T ++D L T
Sbjct: 60 --TVRHVENFTDVNEKIVAR----IGEDELGETEATVADHFTNSVIQDMRGLNLKRATVY 113
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR + HIP +I L+++++ G+AYEAN + FD ++ YG S +++DE + T E+
Sbjct: 114 PRVSEHIPTIIDLVESLLDDGYAYEANGSVYFDVTAFDGYGDLSNQQLDEMEAQTPADER 173
Query: 183 YHKKNPADFILWKR-------------------STPMEPGWESPWGRGRPGWHIECSAMS 223
K++PADF LWK T W +PWG GRPGWHIECSAMS
Sbjct: 174 AEKRHPADFALWKAGGVKPDDLNEHRSEELDQLETTHGQTWNAPWGEGRPGWHIECSAMS 233
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+L + DIH GG DL+FPHHENE+AQS A ++ A W+H G L G KMS S G
Sbjct: 234 MDHLDETLDIHVGGRDLMFPHHENEVAQSEAATD-QQFARYWLHVGLLQSAGDKMSSSIG 292
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
N +TI + L+ VIR+ L T YR L EA + +
Sbjct: 293 NILTIKQALDEHGV-------NVIRMFYLATAYRSEQTLGQSELAEATERWDRLNRAYEM 345
Query: 344 KGIIDPAVLSA----------------------LYNDLNTVSAIQALHKLARESTKNHD- 380
+ + + ND N AI +L KLA ++ D
Sbjct: 346 AVDASNSTDAYAIVEDESLRSSVSETKSSFTSAMNNDFNVREAIASLLKLATSVNRHLDS 405
Query: 381 -----------LLPIFNAS-AHILGIEVCKEHLN----KNISIAIEKLVQERLILLKMKK 424
+ F A + G++ + + IE ++ R +
Sbjct: 406 QERYDYRGLYMAIEAFEALGGEVCGLKFGDQPTGDGTVEIAEELIELILDVRETEREAGN 465
Query: 425 FSSADYIRKQLESKGFILED 444
+ AD +R L+ G ++D
Sbjct: 466 YDRADELRDSLDEIGIEVQD 485
>gi|15594944|ref|NP_212733.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi B31]
gi|224532694|ref|ZP_03673311.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
gi|6831681|sp|O51545|SYC_BORBU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|2688519|gb|AAC66952.1| cysteinyl-tRNA synthetase (cysS) [Borrelia burgdorferi B31]
gi|224512312|gb|EEF82696.1| cysteine--tRNA ligase [Borrelia burgdorferi WI91-23]
Length = 480
Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats.
Identities = 145/497 (29%), Positives = 227/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|225548609|ref|ZP_03769656.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|225370639|gb|EEH00075.1| cysteinyl-tRNA synthetase [Borrelia burgdorferi 94a]
Length = 480
Score = 273 bits (697), Expect = 6e-71, Method: Composition-based stats.
Identities = 146/497 (29%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELT--NFENVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F D
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISEFFTEAFFNDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPDKVLVASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
RV K+N ADF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTLPRVDVDKFKRNKADFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA + C +K ++++H FL ++ KMSKS GNFIT+
Sbjct: 231 DALDIHLGGVDHIGVHHINEIAIAECFLN-KKWCDVFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L + +++ R L +HYR + F++ L E L++K S
Sbjct: 290 KDLED------QNFSPLDFRYLCLTSHYRNQLKFSLDNLQASKIARENLINKLSYFYESL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLNTLNKDLKNFGFSVEKEYYDSFVEKISFDLNVAQGLALLWEIIKSDNLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLQNHDVVIDENMKALIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTRVKRG 480
>gi|292609692|ref|XP_682732.4| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial [Danio rerio]
Length = 566
Score = 272 bits (696), Expect = 6e-71, Method: Composition-based stats.
Identities = 153/520 (29%), Positives = 225/520 (43%), Gaps = 93/520 (17%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
YN+L +K Y CGPTVYD AH+G+A + FD+L R+L +G V
Sbjct: 57 YNSLTKKKEPLILSQEKIATWYSCGPTVYDHAHLGHACSYVRFDILQRILSRLFG-INVI 115
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
+V ITDIDDKII+R+ +E N + + + ++F KD L L P R T
Sbjct: 116 HVMVITDIDDKIIQRSLEE------NISPITLARMHEEEFKKDMLALRVLPPVVYMRVTE 169
Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ+I I+ II +GHAY + + F+T SI + K+ K+
Sbjct: 170 NIPQIIAFIERIIGNGHAYVTSQGNVYFNTKSISH----RYGKLVNLGGNAGEQGVQDKE 225
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
N DF LWK S P EP WESPWG+GRPGWHIECS ++S G DIH GG+DL FPHHE
Sbjct: 226 NSRDFALWKASKPFEPYWESPWGQGRPGWHIECSTIASSVFGHQLDIHSGGIDLAFPHHE 285
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEG--RKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQS + E+ N ++H+G L+L+G KMSKS N++TI + L + + A
Sbjct: 286 NEIAQSEAYHQCEQWGNYFLHSGHLHLKGSVEKMSKSLKNYVTIKDFLAS-------YTA 338
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL--------- 355
RL L+T YR ID++ + EA+ LS + +
Sbjct: 339 NEFRLFCLLTKYRSAIDYSDASMNEAQSTLSTISAFFHNAQAYMQGHMQCQPVEEGFLWE 398
Query: 356 -------------YNDLNTVSAIQALHKLARESTKNHD----------------LLPIFN 386
+D +T A+ A+ L ++
Sbjct: 399 RLSNTQTSVHKMLADDFDTPKAVDAIMSLIYHGNCQLQPATKVDGPRSPAVFGAIMSYVM 458
Query: 387 ASAHILGIEVCKEHL----NKNISIAIEKLVQERLILLK----------------MKK-- 424
+ G+++ + + ++ +E+LV R + K K
Sbjct: 459 EIMSVFGVDLSDKTEVQVSSGVLNNVVEELVHFRSEVRKFALSVEDQAPQESQTGNKNQK 518
Query: 425 ------------FSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ D +R L G ++D +
Sbjct: 519 RHHQPDRLHLSLLKACDALRNNLAPLGVHIKDRGTNSTWE 558
>gi|295148062|ref|NP_001171155.1| hypothetical protein LOC361184 [Rattus norvegicus]
gi|183986065|gb|AAI66536.1| RGD1311612 protein [Rattus norvegicus]
Length = 550
Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats.
Identities = 156/524 (29%), Positives = 234/524 (44%), Gaps = 95/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L K + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I IQ II HGHAY A + FD + + + V
Sbjct: 151 TENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKLVNTVPSATAEPAV--DSD 208
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSAM+S G DIH GG+DL FPH
Sbjct: 209 KRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPH 268
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L++ + KMSKS N+ITI + L +++
Sbjct: 269 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------QTF 321
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------PQT 340
V RL L T+YR ID++ L EA LL
Sbjct: 322 SPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVGEDVL 381
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL ND +T A+ ++ L + + ++
Sbjct: 382 WERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVFGAIVA 441
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSA--------- 428
+GI + K S +++LV+ RL + + ++ A
Sbjct: 442 YVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGATGEAR 498
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D G + W+
Sbjct: 499 KQQLQERQPLLEACDALRQDLMTHGINVKDR-----GHAASTWE 537
>gi|332242118|ref|XP_003270233.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
isoform 1 [Nomascus leucogenys]
Length = 564
Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats.
Identities = 144/524 (27%), Positives = 221/524 (42%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 53 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNI 112
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 113 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 165
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II GHAY + FD + + + P
Sbjct: 166 TENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLVGVVPG---PVGEPADSD 222
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 223 KRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 282
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L++ + KMSKS N+ITI + L +++
Sbjct: 283 HENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTF 335
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
R L + YR I+++ + + +
Sbjct: 336 SPDTFRFFCLRSSYRSAINYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAML 395
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL +D +T I A+ LA ++
Sbjct: 396 WERLSSTKRAVKAALADDFDTPRVIDAILGLAHHGNGQLRAAPKEPGGPRSPAVFGAIIS 455
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA------DYI 431
F +GI + + +++LV+ R + + F+ A D
Sbjct: 456 YFEQFFETVGISLANQRCVSGDGSEATLHGVVDELVRFRQEVRQ---FALAMPEATGDAR 512
Query: 432 RKQLESK-----------------GFILEDYKNPDNGQRMTRWK 458
R+QL + G ++D + + W+
Sbjct: 513 RQQLLERQPLLEACDTLRRGLTVHGINIKDRSSTTS-----TWE 551
>gi|224534810|ref|ZP_03675382.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
gi|224514058|gb|EEF84380.1| cysteine--tRNA ligase [Borrelia spielmanii A14S]
Length = 480
Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats.
Identities = 147/497 (29%), Positives = 231/497 (46%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + +N+++Y CGPTVYD+AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKNFSELT--NFNNVKVYACGPTVYDYAHIGNFRTYIFGDLLIKALRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F KD
Sbjct: 59 --KVDYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTV------HEISEFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI-D 171
+L + P A+ HIP MI +I+ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNIVYPNKVLVASKHIPIMIEVIKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLIN 170
Query: 172 EQKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+ +RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L E +++ R L +HYR + F++ L E ++++ S
Sbjct: 290 EDLEE------QNFSPLDFRYLCLTSHYRSQLKFSLNNLQASRIARENMINRLSYFYASL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 DPVDLSMLNKDLKNFAFSAEKEYYDSFIERVSFDLNISQGLALLWEIIKSENLGLVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ ++ + + KE L + +++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEVISLNLRKEILKNLENHDVVVDESMKILIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|306842058|ref|ZP_07474730.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
gi|306287808|gb|EFM59231.1| cysteinyl-tRNA synthetase [Brucella sp. BO2]
Length = 452
Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats.
Identities = 187/453 (41%), Positives = 252/453 (55%), Gaps = 52/453 (11%)
Query: 52 VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+L+RLLR+ YG + VTY RNITD+DDKI RA +++P +P N+AI +T QF D
Sbjct: 1 MLFRLLRHVYGAQHVTYARNITDVDDKINARAARDYPDLPFNEAIRKVTESTNAQFQADV 60
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFS 166
L L PT QPRAT H+ +M +I ++ G AY A + ++F S++ P YG+ +
Sbjct: 61 AALGNLQPTVQPRATEHMDEMRAMIDRLVQRGVAYVAEDHVLFSPSAMNARKGPRYGALA 120
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAM- 222
RR +DE G RV +K++ DF+LWK S EPGW SP G GRPGWHIECSAM
Sbjct: 121 RRSLDEMLAGARVDVASYKRDEMDFVLWKPSKKGEPGWPSPAGIETLGRPGWHIECSAMS 180
Query: 223 -------------SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
FDIHGGG+DL+FPHHENEIAQSCCA E+ ANIW+HNG
Sbjct: 181 MAKLLEPFGGGLKCDDPERNQFDIHGGGIDLVFPHHENEIAQSCCALGTERMANIWMHNG 240
Query: 270 FLNLEGRKMSKSNGNFITINELL---------ETKKFGGRSWPAPVIRLAMLMTHYREPI 320
FL +EG+KMSKS GNFITI ++L W RL+ML THYREPI
Sbjct: 241 FLQVEGQKMSKSLGNFITIRDVLNDGLPQLGEWGDNTVRDRWVGLAARLSMLQTHYREPI 300
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL-------YNDLNTVSAIQALHKLAR 373
++T QRL E+ L +W +G P LS +DLN+ +AI AL R
Sbjct: 301 NWTAQRLAESADELHRWYGLLRDEGFGAPEKLSQAGAVAAALCDDLNSWAAITAL----R 356
Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKK 424
++ K+ D+ + A ++G+ ++ I AI + ERL + K
Sbjct: 357 QAFKSRDVAALGEGMA-LMGLFDPYFVTASDVPIFARADVDASAIAARIAERLNFIDAKN 415
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++ AD IR +L +G L+D K+P G+R+T W
Sbjct: 416 WAEADRIRDELLQEGVQLKDGKDPATGERITTW 448
>gi|219115755|ref|XP_002178673.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217410408|gb|EEC50338.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 647
Score = 272 bits (696), Expect = 7e-71, Method: Composition-based stats.
Identities = 146/524 (27%), Positives = 223/524 (42%), Gaps = 88/524 (16%)
Query: 2 KKKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++ I N+L R+ F +D S + Y+CGPTVY +H+G+AR + FD++ R+L +
Sbjct: 31 DPRLWITNSLTRQKEHFLTMDGSSRMVWYMCGPTVYAPSHMGHARTYLGFDIIRRILERH 90
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+G VT V N+TDIDDKIIERA ++H + + +F +D L PT
Sbjct: 91 FGY-HVTLVMNVTDIDDKIIERAAEQHVG------HLQLARRYEAEFHQDMADLGVAPPT 143
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
R T ++ ++ I NII G AYE+N + FD + + K+ +++G
Sbjct: 144 TLTRVTEYMDEVTAYIANIIQRGFAYESNGSVYFDVQTFSDTPHMHYCKLAPEQVGNAEL 203
Query: 181 EKY-----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-- 227
K++P DF LWK++ P EP W+SPWG GRPGWHIECS M+S L
Sbjct: 204 LAEGEGKLTQDFVTDKQSPRDFALWKKTKPGEPSWDSPWGPGRPGWHIECSVMASDVLDR 263
Query: 228 ---GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+ D+H GG+DL FPHH+NE+AQ+ + N ++H G L+++G KMSKS N
Sbjct: 264 LLQHRRMDLHSGGVDLKFPHHDNEMAQAEAECGETQWVNYFVHAGHLHIKGLKMSKSLKN 323
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS- 343
FITI + LE A IR+ L+ Y +D+ +T A ++ + +
Sbjct: 324 FITIQQALEIN-------SARQIRMLFLLHKYNAQMDYGDNTMTHAMETEKRFVEFFHNV 376
Query: 344 -------------------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
V AL +D +T +A+ L L R +
Sbjct: 377 KACLRQHRMDDSQKWDATTIRLQQTLAAAKTKVHDALRDDFDTPTAMSVLVDLVRATNIY 436
Query: 379 -----------HDLLPIFNASAHILGIE--------------VCKEHLNKNISIAIEKLV 413
++ G+ +E L + +
Sbjct: 437 VEGDTVVNLVVRNVASYVTDIFRTFGLVGSEDVGFATESGGASREETLGPVLDALMNFRA 496
Query: 414 QERLILLKMKK----FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
R D R L + G LED + +
Sbjct: 497 AVRDKARSQ-DVGGVLDLCDAFRDLHLPNLGIRLEDKADGSVWK 539
>gi|66475306|ref|XP_627469.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
gi|32398684|emb|CAD98644.1| cysteinyl-tRNA-synthetase, possible [Cryptosporidium parvum]
gi|46229332|gb|EAK90181.1| cysteinyl-tRNA synthetase [Cryptosporidium parvum Iowa II]
gi|323508907|dbj|BAJ77346.1| cgd6_960 [Cryptosporidium parvum]
gi|323510143|dbj|BAJ77965.1| cgd6_960 [Cryptosporidium parvum]
Length = 581
Score = 272 bits (696), Expect = 8e-71, Method: Composition-based stats.
Identities = 152/557 (27%), Positives = 226/557 (40%), Gaps = 121/557 (21%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ + N++ TEF ++ + Y CGPTVYD AH+G+AR + FD++ R+L Y
Sbjct: 40 LMLNNSMTGGRTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLED-YFGY 98
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V NITDIDDKII+R+ ++ + + + +F D L P R
Sbjct: 99 DVYLVMNITDIDDKIIKRSNEQKR-----ENFLDLAREFELEFFDDMKALNVKMPDVVTR 153
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
+ IP++I I II G AYE+ + FD S +++ + +
Sbjct: 154 VSEFIPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRVLEG 213
Query: 184 ---------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
KK+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG DIH
Sbjct: 214 EGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPIDIH 273
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG+DL FPHH+NE+AQS + N ++H+G L++ G KMSKS NF TI E+L
Sbjct: 274 SGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEIL-- 331
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------PQ 339
+ IR+ L+ + P++++ + + I + K
Sbjct: 332 -----KENSPRHIRMLFLLHKWDAPMNYSPETSLQEAIAVDKTFVNFFANVKARLRTSYL 386
Query: 340 TSTSKGIIDPAVL------------SALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
++ K I+ L +++NT IQAL L + +L
Sbjct: 387 KNSQKHDIEEEKLRLAIESSSEKIDEFFKDNINTPEVIQALQSLVTVANSYMNLKSDDQI 446
Query: 384 ----------IFNASAHILGIEVCKEHL--------NKNISIAIEKLVQE--------RL 417
ILG+ + + +E+L E R
Sbjct: 447 VGNILRRCATYVYKILSILGLCGEDNEKLNYKDTCDSAYDNSKVEELTNEFMEIIGGFRS 506
Query: 418 IL-----------LKMK------KF------------------SSADYIRK-QLESKGFI 441
K K F S D +R QL
Sbjct: 507 CAKEESKKLMGLCRKEKKAISNNDFGNVGSLIDEVNKSSISLLSKCDQVRDVQLSKLKIT 566
Query: 442 LEDYKNPDNGQRMTRWK 458
LED + WK
Sbjct: 567 LEDRPDGSF-----IWK 578
>gi|224042836|ref|XP_002190645.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial (putative)
[Taeniopygia guttata]
Length = 652
Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats.
Identities = 135/531 (25%), Positives = 212/531 (39%), Gaps = 103/531 (19%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
+N+ + + Y CGPTVYD AH+G+A + FD++ R++ + V
Sbjct: 124 FNSRSQSKEPLVLVTEGVATWYSCGPTVYDHAHLGHACSYVRFDIIRRIMT-RFFGIEVI 182
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
V ITDIDDKII+RA + +N + + + F +D L L PT R T+
Sbjct: 183 MVMGITDIDDKIIKRANE------MNISPIALARIYEEDFKQDMAALKVLPPTVYMRVTD 236
Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ+I I+ I+ G AY + + FD S + + K+
Sbjct: 237 NIPQIISFIETIMSSGQAYATSQGNVYFDVKSWGRRYGVLTAINPDTQ---DEAVDSDKR 293
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ DF LWK + P E W SPWG+GRPGWHIECS +SS GK DIH GG+DL FPHHE
Sbjct: 294 HGKDFALWKAAKPQELSWNSPWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAFPHHE 353
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQ + E+ N ++H+G L+++ KMSKS N+ITI + L + +
Sbjct: 354 NEIAQCEVYHQCEQWGNYFLHSGHLHVKGSQEKMSKSLKNYITIKDFL-------KKCSS 406
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQTST 342
R+ L Y I+++ + + + +
Sbjct: 407 DQFRMFCLRGRYSSAIEYSEESMEDAKNRLQAISSFIRDANAYIKGQLVCDPVREDILWE 466
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------------NHDLLPIF 385
V +A +D +T A+ A+ L + ++
Sbjct: 467 RLANTKATVKAAFADDFDTSRAVAAIMDLIHHGNRQLKAVTKDAVSPRSSVVYGSIISYI 526
Query: 386 NASAHILGIEVCKEH------LNKNISIAIEKLVQERLILL------------------- 420
+ LG+ + + +S IE+LV+ R +
Sbjct: 527 EGFFNALGMSFGERQVALGGDKSAVLSSVIEELVRFRSKVRHYALALPRAADAAPLEGAA 586
Query: 421 -----------KMKK--------FSSADYIRKQLESKGFILEDYKNPDNGQ 452
K K+ + D +R L + G ++D +
Sbjct: 587 GAEEPKQEQKEKRKQLMQERKPLLEACDSLRGDLAAFGIHIQDRAAVSTWE 637
>gi|158521179|ref|YP_001529049.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
gi|158510005|gb|ABW66972.1| cysteine synthase [Desulfococcus oleovorans Hxd3]
Length = 771
Score = 272 bits (695), Expect = 1e-70, Method: Composition-based stats.
Identities = 125/482 (25%), Positives = 203/482 (42%), Gaps = 58/482 (12%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
++NTL R+ F + +Y CGPTV+ +G R M+ D+L R L Y E V
Sbjct: 305 LFNTLTREKEAFAPLAQGKASIYSCGPTVHARMDLGQCRRMVFADLLCRYLVYRGFE--V 362
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
++ NITD DD+ IE A++ + + T F D L P A+
Sbjct: 363 RHIVNITDFDDRTIEGAQKAGMDL------AAFTGTYIDLFKADLKTLRVHPADAYPLAS 416
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK- 185
P+M+ L++ ++ G AYE + FD +S YG S ++ ++G V ++
Sbjct: 417 QEAPEMVALVEKLVDRGVAYEKLRSVYFDIASAEGYGGLSNIDTNKIRLGATVDLDEYEK 476
Query: 186 KNPADFILWKRSTPMEP--GWE--SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+NP DF L KR+ E GW + WG RP HI+C+A+S YLG FDIH G DL+
Sbjct: 477 ENPRDFTLLKRAKMSELKQGWYLKTRWGNVRPSLHIQCAAISRKYLGDRFDIHTGSRDLV 536
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHENEIA + A E A W+H + + T+ + L+
Sbjct: 537 FPHHENEIAIARAATGREP-ARYWVHCDSVLESDDSVHWKTA-RTTLEQALDM------G 588
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------- 345
+ +R ++ HYR+ + F+ R+ A L++ S
Sbjct: 589 FTGRQLRYWLISGHYRKALSFSADRIAAAASALARLDGCVRSLADLAANPSAESARQMEG 648
Query: 346 ----------IIDPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPI 384
I + A+ +DLN +A+ + K + +
Sbjct: 649 AEQDVDQLLYDIRQGFVDAMDDDLNVSAALANIFKNVKTVNVMLDQSRLDGPAAEKIQDA 708
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
F +L + + ++ +++L+++R K K + AD +R+ L G + D
Sbjct: 709 FAGIDSVLQVFDFDQTPADDLLPEVKQLMEQREAARKAKDWELADRLRETLRDMGVSVTD 768
Query: 445 YK 446
K
Sbjct: 769 EK 770
>gi|149730502|ref|XP_001496717.1| PREDICTED: similar to Cysteinyl-tRNA synthetase 2, mitochondrial
(putative) [Equus caballus]
Length = 559
Score = 271 bits (694), Expect = 1e-70, Method: Composition-based stats.
Identities = 147/518 (28%), Positives = 222/518 (42%), Gaps = 91/518 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YN+ R+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 49 KVYNSRTRRKDPLIVGSADATSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 107
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+ V ITD+DDKII RAR+ +N + + + + + F +D L L PT R
Sbjct: 108 IIMVMGITDVDDKIIRRARE------MNVSPTSLANLYEEDFKQDMAALKILPPTVYLRV 161
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II GHAY + FD S + P +
Sbjct: 162 TENIPQIISFIEGIIAKGHAYSTAKGNVYFDLQSRGDKYGKLVGVAPGP---VGEPVESD 218
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS +SS G DIH GG+DL FPH
Sbjct: 219 KRHASDFALWKAAKPQEMFWASPWGNGRPGWHIECSTISSLVFGSQLDIHSGGIDLAFPH 278
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + ++ N ++H+G L++ + KMSKS N+ITI + L ++
Sbjct: 279 HENEIAQCEVFHQCKQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTA 331
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEIL-------------LSKWPQTSTSKGIIDP 349
V RL + + YR ID++ + EA+ L + G
Sbjct: 332 SPDVFRLFCMRSSYRSAIDYSDGAVLEAKHLLLAATAFVEDARAYMRGQLACGPIGEDVL 391
Query: 350 AVL---------SALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
+AL +D +T A+ A+ L + ++
Sbjct: 392 WERLSHTKGAVKAALADDFDTPGAVDAVMDLIHHGNRQLKAVTKEPGGPRSPAVFGSIVS 451
Query: 384 IFNASAHILGIEVCKEHLNKNIS------IAIEKLVQERLILLKMKKFSSA--------- 428
+GI + S +E+LV+ RL + + F+ A
Sbjct: 452 YIEQFFETVGISLADRQFVSGDSGSATLHSVVEELVRFRLKVRQ---FALATGEATREAR 508
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQ 452
D +R+ L + G ++D + +
Sbjct: 509 RQQLLERQPLLEACDTLRQDLVAHGISIKDRSSTSTWE 546
>gi|149057584|gb|EDM08827.1| rCG43187, isoform CRA_a [Rattus norvegicus]
Length = 549
Score = 271 bits (693), Expect = 1e-70, Method: Composition-based stats.
Identities = 155/524 (29%), Positives = 233/524 (44%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L K + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGKKEPLIVGRSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTSVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I IQ II HGHAY A + FD + + +
Sbjct: 151 TENIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKLVNTVPSATAEPV---DSD 207
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSAM+S G DIH GG+DL FPH
Sbjct: 208 KRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPH 267
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L++ + KMSKS N+ITI + L +++
Sbjct: 268 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------QTF 320
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------------PQT 340
V RL L T+YR ID++ L EA LL
Sbjct: 321 SPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVGEDVL 380
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL ND +T A+ ++ L + + ++
Sbjct: 381 WERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVFGAIVA 440
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSA--------- 428
+GI + K S +++LV+ RL + + ++ A
Sbjct: 441 YVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGATGEAR 497
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D G + W+
Sbjct: 498 KQQLQERQPLLEACDALRQDLMTHGINVKDR-----GHAASTWE 536
>gi|269103035|ref|ZP_06155732.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
CIP 102761]
gi|268162933|gb|EEZ41429.1| cysteinyl-tRNA synthetase [Photobacterium damselae subsp. damselae
CIP 102761]
Length = 410
Score = 271 bits (693), Expect = 2e-70, Method: Composition-based stats.
Identities = 152/444 (34%), Positives = 214/444 (48%), Gaps = 74/444 (16%)
Query: 55 RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
R LRY + T+VRNITDIDDKII+RA + + +T + + D L
Sbjct: 3 RYLRYLGYDL--TFVRNITDIDDKIIKRAAENG------ETCDSLTERLIGEMHADFDAL 54
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQ 173
P +PRAT I ++I L + +I G AY N +++F+ S +YG S++ +D+
Sbjct: 55 GMKRPDVEPRATAFISEIIALCERLIERGFAYVADNGDVMFEVSKFKDYGRLSKQDLDQL 114
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ G RV + K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDI
Sbjct: 115 QAGARVDIELAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSAILGDHFDI 174
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
HGGG DL FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF TI ++L
Sbjct: 175 HGGGSDLQFPHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDREKMSKSLGNFFTIRDVL- 232
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------- 345
+ +R ++ HYR ++++ L +A L + +
Sbjct: 233 ------NHYDPETVRYFLMSGHYRSQLNYSEDNLKQARSALERLYTSLRGLDTSVEAAGG 286
Query: 346 -IIDPAVLSALYNDLNTVSAIQALHKLAREST--KNHDLLPI------FNASAHILGIEV 396
A+ +D NT A L +ARE K D+ A +LG+
Sbjct: 287 EEFVARFKEAMDDDFNTPEAYSVLFDMAREINRLKTDDMAAASVLGARMRELADVLGLLG 346
Query: 397 CKEH------LNKNISIAIEKLVQERLILLKMKKFSSADYI--------------RKQLE 436
+ N + IE L+Q+R + R +L
Sbjct: 347 QEPEVFLQSGANDDDVAEIEALIQQR--------------LDARAAKDWAAADQARDKLT 392
Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
G ILED G + T W++K
Sbjct: 393 EMGIILED------GPQGTTWRRK 410
>gi|216263552|ref|ZP_03435547.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
gi|215980396|gb|EEC21217.1| cysteinyl-tRNA synthetase [Borrelia afzelii ACA-1]
Length = 480
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 143/497 (28%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLHNTRTKDFSELT--NFDNVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+++ AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTV------QEISEFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVVYPDKVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS+GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSSGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L E +++ R L +HYR + F++ L E ++++ S
Sbjct: 290 KDLEE------QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASL 343
Query: 345 G--------------------IIDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+ + + DLN + L ++ + L
Sbjct: 344 DPVALGVLNKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L + ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|111115428|ref|YP_710046.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
gi|123341311|sp|Q0SMQ8|SYC_BORAP RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|110890702|gb|ABH01870.1| cysteinyl-tRNA synthetase [Borrelia afzelii PKo]
Length = 480
Score = 271 bits (692), Expect = 2e-70, Method: Composition-based stats.
Identities = 143/497 (28%), Positives = 227/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++NT + +E + N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLHNTRTKDFSELT--NFDNVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+++ AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVVKTAREKGLTV------QEISEFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVVYPDKVLIASKHIPIMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L E +++ R L +HYR + F++ L E ++++ S
Sbjct: 290 KDLEE------QNFSPLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASL 343
Query: 345 G--------------------IIDPAVLSALYNDLNTVSAIQALHKLAREST-KNHDLLP 383
+ + + DLN + L ++ + L
Sbjct: 344 DPVALGVLNKDLKNFGFSEEKEYYDSFIEKVSFDLNISQGLALLWEIIKSENLSFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L + ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKNLENHDVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|13938199|gb|AAH07220.1| Cysteinyl-tRNA synthetase 2, mitochondrial (putative) [Homo
sapiens]
Length = 564
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 144/524 (27%), Positives = 221/524 (42%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 53 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCSI 112
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 113 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 165
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II G+AY + FD S + + P
Sbjct: 166 TENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPG---PVGEPADSD 222
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 223 KRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 282
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L+ + KMSKS N+ITI + L +++
Sbjct: 283 HENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFL-------KTF 335
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
V R L + YR ID++ + + +
Sbjct: 336 SPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAML 395
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL +D +T + A+ LA ++
Sbjct: 396 WERLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIIS 455
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA--------- 428
F +GI + + +++LV+ R + + F+ A
Sbjct: 456 YFEQFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEATGDAR 512
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + + W+
Sbjct: 513 RQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 551
>gi|13375695|ref|NP_078813.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor [Homo
sapiens]
gi|74761587|sp|Q9HA77|SYCM_HUMAN RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|10433519|dbj|BAB13978.1| unnamed protein product [Homo sapiens]
gi|55957407|emb|CAI17004.1| novel protein [Homo sapiens]
gi|55957784|emb|CAI16971.1| novel protein [Homo sapiens]
gi|119629531|gb|EAX09126.1| hypothetical protein FLJ12118 [Homo sapiens]
Length = 564
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 144/524 (27%), Positives = 221/524 (42%), Gaps = 96/524 (18%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 53 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCSI 112
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 113 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 165
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II G+AY + FD S + + P
Sbjct: 166 TENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPG---PVGEPADSD 222
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 223 KRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 282
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L+ + KMSKS N+ITI + L +++
Sbjct: 283 HENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFL-------KTF 335
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
V R L + YR ID++ + + +
Sbjct: 336 SPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAML 395
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL +D +T + A+ LA ++
Sbjct: 396 WERLSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIIS 455
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA--------- 428
F +GI + + +++LV+ R + + F+ A
Sbjct: 456 YFEQFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEATGDAR 512
Query: 429 --------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + + W+
Sbjct: 513 RQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 551
>gi|219684162|ref|ZP_03539106.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
gi|219672151|gb|EED29204.1| cysteinyl-tRNA synthetase [Borrelia garinii PBr]
Length = 480
Score = 270 bits (691), Expect = 3e-70, Method: Composition-based stats.
Identities = 146/497 (29%), Positives = 229/497 (46%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E + +N+++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELA--NFANVKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISKFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVVYPDKVLIASKHIPNMIEVVKILEEKKITYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSRGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
+L E +++ R L +HYR + F+ L E ++++ S
Sbjct: 290 KDLEE------QNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLP 383
D + + + DLN + L ++ + L
Sbjct: 344 DPADLNMLNKDLKNFGFSAEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLR 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L K+ + ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIMSLNLREEILKKSENHNVVVDENMKTLIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLIDTKEGTKVKRG 480
>gi|224531997|ref|ZP_03672629.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
gi|224511462|gb|EEF81868.1| cysteinyl-tRNA synthetase [Borrelia valaisiana VS116]
Length = 480
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 148/497 (29%), Positives = 228/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E D +++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKVYNTRTKDFSELTNFDD--VKLYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDFDDGEDKVAKTAREKGLTVY------EISEFFTEAFFKDCR 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L P A+ HIP MI +++ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVTYPDKVLIASKHIPIMIEVVKILEEKKVTYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMTFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGLGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS GNFITI
Sbjct: 231 DKLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSLGNFITI 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
N+L E +++ + R L +HYR + F++ L E ++++ S
Sbjct: 290 NDLEE------QNFSSLDFRYLCLTSHYRNQLKFSLNNLQASKIARENMINRLSYFYASL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLP 383
+D + + + DLN + L ++ + L
Sbjct: 344 NPVDLKILDKDLKNLSSNAEKEYYDSFVEKISFDLNVPQGLALLWEIIKSENLGFVSKLK 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L I ++ L++ER I K F AD IR
Sbjct: 404 LAFVFDEIMSLNLKEEILKSLENHDVVIDDDMKTLIEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLVDTKEGTKVKRG 480
>gi|224369768|ref|YP_002603932.1| CysS3 [Desulfobacterium autotrophicum HRM2]
gi|223692485|gb|ACN15768.1| CysS3 [Desulfobacterium autotrophicum HRM2]
Length = 759
Score = 270 bits (690), Expect = 3e-70, Method: Composition-based stats.
Identities = 130/475 (27%), Positives = 213/475 (44%), Gaps = 50/475 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNTL R F+ + +Y CGPTV+ R + D+L R L Y
Sbjct: 302 NLTLYNTLTRSQERFEPKAQGKVAVYTCGPTVHKAMDPTRFRRFVATDLLVRYLEYRG-- 359
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V NITD+DD+ I+ + + ++P T + + F KD TRL P
Sbjct: 360 LTVNHVVNITDLDDRTIKGSERMDMTVP------EFTRPHIRSFKKDLTRLGVRPAQAYP 413
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ HI M+ + + ++ G AYE N + D SS+ YGS S +D+ ++G V
Sbjct: 414 LVSEHIEDMVAVAERLVEQGVAYEKLNSLYCDISSLEGYGSLSGVNLDKIRVGATVDLDD 473
Query: 184 HK-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
++ NP DF L KR E + WG RP H++C+A++ Y G FDIH G
Sbjct: 474 YEKDNPRDFTLLKRVGLSELKRGVCVRTKWGNVRPSLHLQCAALAMKYHGGGFDIHTGSR 533
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
+L+FPHHENE A S + E A IW+H + +G ++ G +LLE
Sbjct: 534 ELLFPHHENENAMSRALVK-EPLARIWVHCDCVTYDGSLGVETLGEVDL--DLLEKL--- 587
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
W V+R +L HYR+P+ F+ Q L +A L ++ + S
Sbjct: 588 --GWEPRVVRFFLLSCHYRKPLTFSSQGLIDAGRALDRFDRCIESLSQVREGEPFPGMDQ 645
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHI 391
I +S++ +DL + L K + + ++L +F +
Sbjct: 646 LLYDIRNGFISSMDDDLKISGVMAVLFKGVKTLNRLIACHQIDARGAREVLALFREINGV 705
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
L I + K++S L+++R +++ AD +R+++++ G + D K
Sbjct: 706 LNIFEFEP--GKSVSHEAAALIEKREAARLSGQWTLADRLRQEIKALGVEINDKK 758
>gi|332242120|ref|XP_003270234.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial
isoform 2 [Nomascus leucogenys]
Length = 572
Score = 270 bits (690), Expect = 4e-70, Method: Composition-based stats.
Identities = 141/486 (29%), Positives = 212/486 (43%), Gaps = 74/486 (15%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 53 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNI 112
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 113 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 165
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II GHAY + FD + + + P
Sbjct: 166 TENIPQIISFIEGIIARGHAYSTAKGNVYFDLKARGDKYGKLVGVVPG---PVGEPADSD 222
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPH
Sbjct: 223 KRHASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPH 282
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQ + E+ N ++H+G L++ + KMSKS N+ITI + L +++
Sbjct: 283 HENEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTF 335
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQT 340
R L + YR I+++ + + +
Sbjct: 336 SPDTFRFFCLRSSYRSAINYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAML 395
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
AV +AL +D +T I A+ LA ++
Sbjct: 396 WERLSSTKRAVKAALADDFDTPRVIDAILGLAHHGNGQLRAAPKEPGGPRSPAVFGAIIS 455
Query: 384 IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA------DYI 431
F +GI + + +++LV+ R + + F+ A D
Sbjct: 456 YFEQFFETVGISLANQRCVSGDGSEATLHGVVDELVRFRQEVRQ---FALAMPEATGDAR 512
Query: 432 RKQLES 437
R+QL
Sbjct: 513 RQQLLE 518
>gi|203288037|ref|YP_002223052.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
gi|201085257|gb|ACH94831.1| cysteinyl-tRNA synthetase [Borrelia recurrentis A1]
Length = 485
Score = 270 bits (689), Expect = 5e-70, Method: Composition-based stats.
Identities = 142/498 (28%), Positives = 226/498 (45%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + ++E + + + +Y CGPTVY++AHIGN R I D+L + L+
Sbjct: 5 MLLKLYNTKTKCLSEVKNLSETK--IYACGPTVYNYAHIGNLRTYIFEDLLIKSLKL--F 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V Y NITDI +DK+++ A++ ++ I+ T+ F D
Sbjct: 61 KYNVNYAMNITDIGHLTGDFDDGEDKVVKAAKERGLTVY------DISRFFTKAFFDDCK 114
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L L P A+ +I MI +++ + +G Y N + FD S NYG + +++
Sbjct: 115 KLNILYPDKVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLND 174
Query: 173 --QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ +RV + K+N +DF+LW + E W+SPWG G P WH+EC+ M+ +Y
Sbjct: 175 INENSVSRVELDFSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYF 234
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
+IH GG+D I HH NEIA C + +++IH FL +E KMSKSN +FIT
Sbjct: 235 NSTLNIHLGGIDHIRVHHVNEIAIMECYLG-KNWCDMFIHGEFLIMENEKMSKSNNDFIT 293
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----KWPQTSTS 343
I L + + R L HYR + FT L ++ K +S
Sbjct: 294 IKNLED------EGFSPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSS 347
Query: 344 KGIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLL 382
D + L + DLN + L + R++ + L
Sbjct: 348 LSQFDISLLSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLSKL 407
Query: 383 PIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +L + + +E L + I + L++ER + K F AD IR+
Sbjct: 408 KLAFKFDEVLSLGLREEILREIDMSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCR 467
Query: 437 SKGFILEDYKNPDNGQRM 454
SKGFIL D + +R
Sbjct: 468 SKGFILIDTEEGTKVKRG 485
>gi|51598852|ref|YP_073040.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
gi|61216166|sp|Q660S3|SYC_BORGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|51573423|gb|AAU07448.1| cysteinyl-tRNA synthetase [Borrelia garinii PBi]
Length = 480
Score = 269 bits (688), Expect = 6e-70, Method: Composition-based stats.
Identities = 146/497 (29%), Positives = 225/497 (45%), Gaps = 62/497 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +E +++Y CGPTVY++AHIGN R I D+L + LR+
Sbjct: 1 MILKLYNTRTKDFSELANFSD--VKVYACGPTVYNYAHIGNFRTYIFGDLLIKTLRFLGY 58
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V Y NITDI +DK+ + AR++ ++ I+ T+ F KD
Sbjct: 59 --KVNYAMNITDIGHLTGDLDDGEDKVAKTAREKGLTVY------EISKFFTEAFFKDCK 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ HIP MI +I+ + Y +N + FDTS +YG + + +
Sbjct: 111 KLNVVYPDKVLIASKHIPNMIEVIKILEEKKFTYFSNGNVYFDTSCFKSYGEMAGIDLID 170
Query: 173 -QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+RV K+N DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 KDMAFSRVDIDKFKRNKTDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLEYFK 230
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D I HH NEIA C +K +I++H FL ++ KMSKS+GNFIT+
Sbjct: 231 DTLDIHLGGVDHIGVHHINEIAIVECFLN-KKWCDIFVHGEFLIMDYNKMSKSHGNFITV 289
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----EAEILLSKWPQTSTSK 344
K +++ R L +HYR + F+ L E ++++ S
Sbjct: 290 ------KGLEEQNFSPLDFRYLCLTSHYRNQLKFSFNNLKASKIARENMINRLSYFYASL 343
Query: 345 GIID--------------------PAVLSALYNDLNTVSAIQALHKLARESTKNH-DLLP 383
D + + + DLN + L ++ + L
Sbjct: 344 DPADLNMLNKDLKNFGFSIEKEYYDSFVEKVSFDLNVSKGLALLWEVIKSENLGFVSKLK 403
Query: 384 IFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ I+ + + +E L K+ I ++ L++ER I K F AD IR
Sbjct: 404 LAFIFDEIISLNLREEILKKSENHNIVIDENMKILLEERRIAKCEKNFKRADEIRDFFAK 463
Query: 438 KGFILEDYKNPDNGQRM 454
KGF+L D K +R
Sbjct: 464 KGFVLIDTKEGTKVKRG 480
>gi|224369114|ref|YP_002603278.1| CysS1 [Desulfobacterium autotrophicum HRM2]
gi|223691831|gb|ACN15114.1| CysS1 [Desulfobacterium autotrophicum HRM2]
Length = 668
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 134/475 (28%), Positives = 214/475 (45%), Gaps = 51/475 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ NTL +K F+ +I +Y CGPTV+ H+G AR + D+L R L +
Sbjct: 213 LKVLNTLTQKKELFKPNKSESIGIYSCGPTVHGRIHLGEARRFVFSDLLCRYLEFSGY-- 270
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V NITD+DDKIIE + + H + + T +N QF KD L T P
Sbjct: 271 KVNHVMNITDLDDKIIEASEKAHMDMDL------FTEENIIQFKKDLDLLGIRDATKYPL 324
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
A+ H+ +MI L II +G YE + FD S +P+YG S +D+ +GT V +
Sbjct: 325 ASLHVEEMISLADKIIENGFGYEKLRSVYFDVSKLPSYGRLSGVDLDKMNLGTTVDLDDY 384
Query: 185 K-KNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ ++P DF L KR E + + WG RP WHI+C AM+ YL + FDIH
Sbjct: 385 EKEDPRDFTLLKRVKLNELKKGIYYSTKWGNVRPSWHIQCPAMAMKYLSENFDIHTSARH 444
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHENEIA + + AN W+H G + E +++ + L +
Sbjct: 445 LIFPHHENEIAIAEAVTG-KLLANYWMHCGPVMFEDKEVDEKKR-------FLTVEFVLK 496
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP---------- 349
+ +R +L ++Y+ + F+ +RL L + + ++
Sbjct: 497 MGFSERELRYWLLSSNYQRSLPFSRERLLAKRKSLKRVDDFIQALLNVENADNDSVVEDL 556
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHIL 392
A+ +DLN A+ ++ K R+ +++ F +L
Sbjct: 557 AQDTIDEFTKAMDDDLNISVALASIFKTVRKGNNLIQKMEMTAQAAENIINAFKKIDAVL 616
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
+ + + L+ R L K K + +AD IR +LE++G + D +
Sbjct: 617 NVFSFDPPF---LEQDTQVLMDRRNALRKGKDWEAADQIRVELENRGIEINDLGD 668
>gi|153824225|ref|ZP_01976892.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|126518251|gb|EAZ75476.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
Length = 263
Score = 269 bits (687), Expect = 7e-70, Method: Composition-based stats.
Identities = 128/272 (47%), Positives = 172/272 (63%), Gaps = 10/272 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGSGRPGWHIECSAMNSSILGTHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
PHHENEIAQSCCA + N W+H+G + ++
Sbjct: 233 PHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVD 263
>gi|170049121|ref|XP_001870889.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
gi|167871024|gb|EDS34407.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
Length = 516
Score = 269 bits (687), Expect = 8e-70, Method: Composition-based stats.
Identities = 169/504 (33%), Positives = 238/504 (47%), Gaps = 77/504 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+IY+ ER Q + Y CGPTVYD AHIG+A + D++ R+LR ++
Sbjct: 28 IRIYSCKERAKVPLQLASDPSSFTSFYTCGPTVYDSAHIGHASCYVRLDIVQRILRDHFR 87
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V+ NITDIDDKII+RA ++ ++ + Q+F D RL P +
Sbjct: 88 LRLVS-AMNITDIDDKIIKRAGEDG------RPWQDVSRRYEQEFWGDLQRLNVRLPDIR 140
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
R T+HIP ++ ++ +I G AY+++++ + F+TS YG E
Sbjct: 141 LRVTDHIPAIVGFVEALIREGFAYKSSDDSVYFETSRYSQYGKLQNIPAVE------EST 194
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+ ADF LWK + P EP WESP+G GRPGWHIECS +++ GK D H GGLDL
Sbjct: 195 SEGKKSAADFALWKAAKPGEPAWESPFGPGRPGWHIECSTLATQIFGKRLDFHAGGLDLR 254
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGG 299
FPHHENE AQSCC + WIH G L+LEG+ KMSKS N I+I ELLE
Sbjct: 255 FPHHENEEAQSCCYHGVPDWVQHWIHTGQLHLEGQTAKMSKSLKNTISIGELLERS---- 310
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------- 345
A R+ L++HYR I+F Q +T A +L K+
Sbjct: 311 ---SADEFRMLCLLSHYRSAIEFGDQSMTVATNVLRKFHSFFDDSKAYVSGVKPATVINS 367
Query: 346 --------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------------- 383
ID + L ND NT SAI +L LA K+ + P
Sbjct: 368 ADLQSTLQEIDLKIDEFLRNDFNTASAITSLGDLASVVHKSINQKPPEAVQASESGTVQA 427
Query: 384 ---IFNASAHILGIEVCKEHLNKNISIA------IEKLVQERL----ILLKMKK---FSS 427
++ G+E E+ IS I+ +VQ R ++ K F+
Sbjct: 428 VTNYIRDKLNLFGLEAFGENRKSEISSKDSTGQIIDSVVQIRNSVRGQAIESKDRRLFAV 487
Query: 428 ADYIRKQLESKGFILEDYKNPDNG 451
D +R QL+ G ++D+ +
Sbjct: 488 CDQMRNQLKQAGVEVKDHGRNSSW 511
>gi|320095413|ref|ZP_08027091.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319977656|gb|EFW09321.1| cysteine--tRNA ligase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 437
Score = 268 bits (686), Expect = 9e-70, Method: Composition-based stats.
Identities = 141/431 (32%), Positives = 215/431 (49%), Gaps = 51/431 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y++ + + + P + +Y+CG TV H+G+ R + FD L R LR E
Sbjct: 1 MRLYDSKTASVRPLEPVVPGEVGIYLCGATVQGSPHVGHLRAAVSFDTLIRWLRRSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI+ ++ Q + ++F L APT++PR
Sbjct: 60 -VTYVRNVTDIDDKILTKSAQAGWD------WWAWAYRYEREFTSAYDALGVQAPTYEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQK-----MGTR 178
AT HIP I L++ ++ GHAY+ + FD S P+YGS +R+++ + +
Sbjct: 113 ATGHIPDQIDLVRRLVERGHAYDDGAGNVYFDVHSQPDYGSLTRQRLADMRTTEDEAQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + P EP W+SPWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 AAVEAGKRDPRDFALWKATKPGEPATASWDSPWGRGRPGWHLECSAMSRRYLGDEFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL FPHHENE AQS A A +W+HN ++ +G KMSKS GN +++ L
Sbjct: 233 GGIDLRFPHHENEQAQSHGAGWA--FARMWVHNAWVTTKGEKMSKSLGNVLSLEALT--- 287
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW----------------PQ 339
R PA +R A+ H+R I++ + L A +++ +
Sbjct: 288 ----RDHPAVAVRWALSTVHHRSAIEWGPETLDNAASAWARFSGFVSRAIEAVGEAGAEE 343
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLP------IFNASAH 390
+ + A A+ +DLN A+ H+ + + D + +
Sbjct: 344 VAIPADGLPAAFREAMDDDLNVAGALAVAHEHLKAGNVALGSGDAEAVRREQVLVRSMLD 403
Query: 391 ILGIEVCKEHL 401
+LG++
Sbjct: 404 VLGLDPASPQW 414
>gi|203284503|ref|YP_002222243.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
gi|201083946|gb|ACH93537.1| cysteinyl-tRNA synthetase [Borrelia duttonii Ly]
Length = 485
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 142/498 (28%), Positives = 224/498 (44%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + ++E + + + +Y CGPTVY++AHIGN R I D+L + L+
Sbjct: 5 MLLKLYNTKTKCLSEVKNLSETK--IYACGPTVYNYAHIGNLRTYIFEDLLIKSLKL--F 60
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V Y NITDI +DK+++ A++ ++ I T+ F D
Sbjct: 61 KYNVNYAMNITDIGHLTGDFDDGEDKVVKAAKERGLTVC------EIGKFFTKAFFDDCK 114
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L L P A+ +I MI +++ + +G Y N + FD S NYG + +++
Sbjct: 115 KLNILHPDKVLVASEYILDMIEVVKVLEKNGFTYFVNGNVYFDISRFKNYGQMAGINLND 174
Query: 173 --QKMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ +RV K+N +DF+LW + E W+SPWG G P WH+EC+ M+ +Y
Sbjct: 175 INENSVSRVELDLSKRNKSDFVLWFTNSKFQNQEMKWDSPWGFGYPSWHLECATMNLNYF 234
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
+IH GG+D I HH NEIA C + +++IH FL +E KMSKSN +FIT
Sbjct: 235 NSTLNIHLGGIDHIRVHHVNEIAIMECYLG-KNWCDMFIHGEFLIMENEKMSKSNNDFIT 293
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----KWPQTSTS 343
I L + + R L HYR + FT L ++ K +S
Sbjct: 294 IKNLED------EGFSPLDFRYFCLTAHYRTQLKFTFHSLKACKVARENLLSKLTSCYSS 347
Query: 344 KGIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLL 382
D + L + DLN + L + R++ + L
Sbjct: 348 LSQFDISLLSQDDENIEFILEHKYYDSFLERIAFDLNIPKVLALLWDIVRDNNLSSLAKL 407
Query: 383 PIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +L + + +E L + I + L++ER + K F AD IR+
Sbjct: 408 KLAFKFDEVLSLGLREEILREIDRSRIVIDDVMNSLIEERRLAKLKKDFKRADEIREYCR 467
Query: 437 SKGFILEDYKNPDNGQRM 454
SKGFIL D + +R
Sbjct: 468 SKGFILIDTEEGTKVKRG 485
>gi|118084394|ref|XP_416955.2| PREDICTED: similar to MGC88928 protein [Gallus gallus]
Length = 624
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 131/468 (27%), Positives = 202/468 (43%), Gaps = 68/468 (14%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
YN+ R Y CGPTVYD AH+G+A + FD++ R+L + E V
Sbjct: 43 YNSRSRSKEPLVLAKDGVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILT-RFFETEVI 101
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
V ITDIDDKII RA + +N + + + F +D L L PT R T
Sbjct: 102 MVMGITDIDDKIIRRANE------MNISPVALARIYEEDFKQDMASLKVLPPTVYMRVTE 155
Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ+I I+ II +G AY + + FD +S + + K+
Sbjct: 156 NIPQIISFIKTIIANGQAYATSQGNVYFDVNSWGERYGVLTAVSPDTQ---GEAVDTDKR 212
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ DF LWK + P E W SPWG+GRPGWHIECS +SS GK DIH GG+DL FPHHE
Sbjct: 213 HGRDFALWKAAKPQELSWSSPWGKGRPGWHIECSTISSAVFGKQLDIHTGGIDLAFPHHE 272
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQ + E+ N ++H+G L+++ KMSKS N+ITI + L + + +
Sbjct: 273 NEIAQCEVYHQCEQWGNYFLHSGHLHVKGSQEKMSKSLKNYITIKDFL-------KKFSS 325
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQTST 342
R+ L + Y ++F+ + + + +
Sbjct: 326 DQFRMFCLRSRYSSAVEFSDETMNDAKNVLQAISSFIRDANAYIKGQLVCDPVREDVLWE 385
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------------NHDLLPIF 385
V +A +D +T A+ A+ L + +
Sbjct: 386 RLASTKVNVKAAFADDFDTSRAVAAIMDLIHHGNRQLKAVTKDAVSPRSSVVYGSITSYI 445
Query: 386 NASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSS 427
+ + LG+ + + + +S +++LV R + ++
Sbjct: 446 ESFFNALGMSLEERQVAVGGGNTALLSNVMDELVSFRTKVR---NYAL 490
>gi|15790190|ref|NP_280014.1| hypothetical protein VNG1097G [Halobacterium sp. NRC-1]
gi|169235919|ref|YP_001689119.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
gi|21264026|sp|Q9HQL9|SYC_HALSA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|10580644|gb|AAG19494.1| cysteinyl-tRNA synthetase [Halobacterium sp. NRC-1]
gi|167726985|emb|CAP13771.1| cysteine--tRNA ligase [Halobacterium salinarum R1]
Length = 494
Score = 268 bits (685), Expect = 1e-69, Method: Composition-based stats.
Identities = 145/502 (28%), Positives = 227/502 (45%), Gaps = 71/502 (14%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
NT + F+ DP N+ +Y CG TV D AH+G+AR + DV+ R L + V +
Sbjct: 7 NTRSGEQEAFEPDDPENVLVYTCGLTVSDDAHLGHARLWVQSDVMTRWLSHAGYG--VRH 64
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
V+N+TD+++KI+ R + + D + + + TQ + D L PR + H
Sbjct: 65 VQNVTDVNEKIVARVGADG----LGDTEAAVAAHYTQSVIDDMRALNLARADVYPRVSEH 120
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+P++I LI +++ G+AYEA + FD YG+ S +++DE E+ K++P
Sbjct: 121 VPEIIDLIGDLVDAGYAYEAGGSVYFDVRRFEEYGALSGQQVDELDPQGPDAEQAEKRHP 180
Query: 189 ADFILWKR-------------------STPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
ADF LWK W SPWG GRPGWHIECSAM+ +L
Sbjct: 181 ADFALWKAGGVSPDDANTHRDDELPPLDGERGQTWASPWGEGRPGWHIECSAMAMTHLDD 240
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG DL+FPHHENEIAQS A E+ A+ W+H L +G KMS S GNF T++
Sbjct: 241 HIDIHVGGQDLVFPHHENEIAQSEAASG-ERFADHWLHVRLLETDGEKMSSSLGNFFTVS 299
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
+ + V+R+ ++ T Y + ++ ++EA + +
Sbjct: 300 NAVAER-------GPNVVRMLLVSTSYTQRQTYSEATVSEATQRWERLQRAHERAADAID 352
Query: 350 AVLSA----------------------LYNDLNTVSAIQALHKLARESTKN--------- 378
+V + + D NT +A+ AL +LA ++
Sbjct: 353 SVAAHAKPADDALRTAVADARGEFAAAMRADFNTRAAVSALLELASAVNRHVDGTDTYDY 412
Query: 379 ---HDLLPIFNAS-AHILGIEVCK---EHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
HD + F +LG++ E I+ ++ R + AD +
Sbjct: 413 QGLHDAVDAFETLGGDVLGLQFDDGAGEDAVSLADDVIDLVLDVREQERTAGNYERADDL 472
Query: 432 RKQLESKGFILEDYKNPDNGQR 453
R +LE+ G +ED + +R
Sbjct: 473 RDRLEALGVSVEDTDDGATVRR 494
>gi|221055309|ref|XP_002258793.1| cysteine--trna ligase [Plasmodium knowlesi strain H]
gi|193808863|emb|CAQ39566.1| cysteine--trna ligase, putative [Plasmodium knowlesi strain H]
Length = 695
Score = 268 bits (685), Expect = 2e-69, Method: Composition-based stats.
Identities = 149/546 (27%), Positives = 224/546 (41%), Gaps = 123/546 (22%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N+L R EF + IR Y CGPTVYD AH+G+AR + FD++ R+L Y + V
Sbjct: 128 NSLTRSKVEFVPQEKDQIRWYACGPTVYDAAHLGHARTYVSFDIIRRIL-VNYFKYDVFM 186
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
V NITDIDDKII+R+ +E S + + K +F +D +L L PT R + +
Sbjct: 187 VINITDIDDKIIKRSEEEKVS------FTELARKWELEFWEDMKKLNVLLPTAITRVSEY 240
Query: 129 IPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ Q+I+ I+ II + +AY + FD + +++ + + +
Sbjct: 241 VDQIIHYIEKIIENKYAYVSEEGSVYFDIDAFKKNPKHFYARMEPLSVKDETKILEGEGD 300
Query: 188 PA----------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
DF LWK S P EP W SPWG+GRPGWHIECS M+S+ LG V DIH GG
Sbjct: 301 LGVISKKKKNSYDFALWKSSKPNEPYWNSPWGKGRPGWHIECSTMASNILGSVLDIHSGG 360
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 361 VDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHMLS---- 416
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTSTSK 344
+ IR+ L+ + ++++ + + L K S
Sbjct: 417 ---QYTPNQIRILFLLNKWDNFMNYSPNGESMIQCVEIDKFLFNFFALLEMKIKNFHLSN 473
Query: 345 GIIDPAVLSALYN----------------DLNTVSAIQALHKLARESTKN---------- 378
+ + N + NT I AL KL E
Sbjct: 474 SNLFWTQVDNNLNNLFRSTKNKVHQALLDNFNTPEVILALQKLITEINIYLQNEKVQIGL 533
Query: 379 -HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ-------------------ERLI 418
+L + G+ + KN ++L+Q R I
Sbjct: 534 LLELKHYISFILDTFGLVYGQTQSGKN--EKFDELLQTLGTYRSNIRTTLQSNAKLIRKI 591
Query: 419 LLKMKK---------------------FS---------------SADYIRKQ-LESKGFI 441
+ K ++ D +R + L + G +
Sbjct: 592 MKDTKDVTKKGGEEDENNSTTQQRDLLYAEFVNSVKANNETLLKECDLLRDERLLNLGIL 651
Query: 442 LEDYKN 447
++D N
Sbjct: 652 IDDRPN 657
>gi|73989537|ref|XP_534184.2| PREDICTED: similar to CG8257-PA [Canis familiaris]
Length = 628
Score = 268 bits (684), Expect = 2e-69, Method: Composition-based stats.
Identities = 146/496 (29%), Positives = 221/496 (44%), Gaps = 91/496 (18%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
+Y CGPTVYD AH+G+A + FD++ R+L +G V V ITD+DDKII RA +
Sbjct: 140 LYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFGY-NVIMVMGITDVDDKIIHRASE-- 196
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+N + + + + ++F +D L L PT R T IPQ+I I+ II +GHAY
Sbjct: 197 ----MNVSPASLANLYEEEFKQDMAALKVLPPTVYVRVTETIPQIISFIEGIIANGHAYS 252
Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ FD S + + P K++ +DF LWK + P E W S
Sbjct: 253 TAQGNVYFDLQSRGDKYGKLVGVVPGP---LGEPVDSDKRHASDFALWKAAKPQEVFWAS 309
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG+GRPGWHIECS +SS G DIH GG+DL FPHHENEIAQ + ++ N ++
Sbjct: 310 PWGKGRPGWHIECSTISSLVFGSQLDIHSGGVDLAFPHHENEIAQCEAFHQCKQWGNYFL 369
Query: 267 HNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
H+G L++ + KMSKS N+ITI + L +++ V RL + + YR ID++
Sbjct: 370 HSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTFSPDVFRLFCMRSSYRAAIDYSD 422
Query: 325 QRLTEAEIL----------------------LSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
+ EA+ L + AV +AL +D NT
Sbjct: 423 GTMLEAKHLLLVVAAFVEDARAYMKGQLVCGPIRDDVLWERLCHTQEAVKAALADDFNTP 482
Query: 363 SAIQALHKLARESTKN-----------------HDLLPIFNASAHILGIEVCKEHLNKNI 405
+A+ A+ L + ++ +GI + L
Sbjct: 483 AAVDAIMDLIHHGNRQLKARTKEPGGPRSPAVFGSIVSYIKQFFETVGISLADRQLVSED 542
Query: 406 S------IAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLE 436
S +E+LV+ RL + + F+ A D +R+ L
Sbjct: 543 SSRATLHSVVEELVRFRLKVRQ---FALATEAATREAGRQQLLDRRPLLEACDTLRQDLA 599
Query: 437 SKGFILEDYKNPDNGQ 452
+ G ++D + +
Sbjct: 600 AHGISIKDRSSTSTWE 615
>gi|227495626|ref|ZP_03925942.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
gi|226830858|gb|EEH63241.1| cysteine--tRNA ligase [Actinomyces coleocanis DSM 15436]
Length = 445
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 143/459 (31%), Positives = 213/459 (46%), Gaps = 68/459 (14%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R + FD L R L+ VTYVRNITDIDDKI+ ++ + + + +K
Sbjct: 1 MRSAVAFDTLIRWLKRNG--MKVTYVRNITDIDDKILRKSAE------VGEPWWAWAAKF 52
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNY 162
++F L L T +PRAT HI + LI +I GHAY + FD S+ +Y
Sbjct: 53 EREFSAAYDALGLLPATFEPRATAHITDQLNLINRLIERGHAYADGQGNVYFDVHSLDDY 112
Query: 163 GSFSRRKI-----DEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPG 214
GS +R+ + E + + K++ DF LWK + P EP W+SPWGRGRPG
Sbjct: 113 GSLTRQDLANMRTTEDESQIDSATEAGKRDTRDFALWKSAKPTEPTTAAWDSPWGRGRPG 172
Query: 215 WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
WH+ECSAMS YLG+ FDIHGGG+DL FPHHENE AQS A AN+W+HN ++ L+
Sbjct: 173 WHLECSAMSERYLGETFDIHGGGIDLRFPHHENEQAQSHGAGWG--FANLWVHNAWVTLK 230
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G KMSKS GN + + ++LET PAPV+R A+ H+R +++ + L A+
Sbjct: 231 GEKMSKSLGNSLVVADILETV-------PAPVLRFALGTVHHRSTVEYGEETLAAAQAAW 283
Query: 335 SKWPQTSTSKGII-------------------DPAVLSALYNDLNTVSAIQALHKLARES 375
+ + A +A+ +DLN A+ ++++ +
Sbjct: 284 DRLAGFVVRATQLLAENQVAEISEGELAQHPLPEAFAAAMNDDLNVAGALASVYERLKAG 343
Query: 376 TKNHDLLPI---------FNASAHILGIEVCKEHLNK--------------NISIAIEKL 412
A ILG++ + + +
Sbjct: 344 NSALTAGDTETVRVALCDVRAMLSILGLDPASTQWAPFVFGNGSSNNGAQHALDTLVSAV 403
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
++ER K + AD +R +L G ++ED +
Sbjct: 404 IEERAQARADKDWGRADALRDRLTVAGIVVEDSADGARW 442
>gi|281202238|gb|EFA76443.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 633
Score = 267 bits (682), Expect = 3e-69, Method: Composition-based stats.
Identities = 139/514 (27%), Positives = 221/514 (42%), Gaps = 78/514 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++IYN+L F I + Y+CGPTVYD +H+G+AR I FD++ R+++ Y
Sbjct: 28 SELQIYNSLTSSKVPFTPISGGKSVSWYICGPTVYDASHMGHARSYISFDIIRRIMKD-Y 86
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V Y+ N + S + ++ K F D L L P
Sbjct: 87 LGYDVQYIMN------ITDIDDKIIIRSREQGITHTELSRKWENSFFDDLKALNVLPPDA 140
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS-------FSRRKIDEQK 174
R T ++P+++ ++ II +G AYE+N + FDT + + +
Sbjct: 141 LTRVTEYVPEIVTFVEKIIANGFAYESNGSVYFDTEAYMKVHEYGKLEPSSVGNEKLNSE 200
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
+ K+N DF LWK+S EP W SPWG GRPGWHIECSAM+S LG DIH
Sbjct: 201 GEGALSAGSDKRNNNDFALWKKSKEGEPKWNSPWGEGRPGWHIECSAMASDILGANIDIH 260
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG DL FPHH+NEIAQS ++ N +IH+G L ++G KMSKS NFITI + L
Sbjct: 261 SGGEDLKFPHHDNEIAQSEAHYGCKQWINYFIHSGHLLIDGLKMSKSLKNFITIQDAL-- 318
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------- 347
+ + A IR+ L+ Y +P++++ + +T + + + + I
Sbjct: 319 -----KKYTARQIRMLFLIHRYDKPMNYSTESMTNVIEIEKIFTEFFHAVKSIVRDAPQS 373
Query: 348 -------------------DPAVLSALYNDLNTVSAIQALHKLARESTKN---------- 378
V L ++ NT AI AL+ L + +
Sbjct: 374 LAQNWEQVDKDLNNQLLETKKKVHEFLLDNFNTTDAIHALNDLVKRTNVYLADKNRNPRL 433
Query: 379 ---HDLLPIFNASAHILGI---------EVCKEHLNKNISIAIEKLVQERLILLK---MK 423
+++ + G+ ++ + ++ LV+ R + K
Sbjct: 434 AILNNIATYITHILRVFGLVEGSAIGFGSGGSANVEDTLKPVLDALVEFRNQIRSSAINK 493
Query: 424 KFSS----ADYIRKQ-LESKGFILEDYKNPDNGQ 452
FS D++R + L G ++D +
Sbjct: 494 DFSKILQSCDHLRDEVLPLLGVKIDDKSGNSVWK 527
>gi|153803824|ref|ZP_01958410.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
gi|124120641|gb|EAY39384.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-3]
Length = 248
Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats.
Identities = 124/255 (48%), Positives = 162/255 (63%), Gaps = 9/255 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +D+ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSQYSEYGKLSKQDLDQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FDIHGGG DL F
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFDIHGGGSDLQF 232
Query: 243 PHHENEIAQSCCADR 257
PHHENEIAQSCCA
Sbjct: 233 PHHENEIAQSCCAHD 247
>gi|187918460|ref|YP_001884023.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
gi|229558618|sp|B2S0U7|SYC_BORHD RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|119861308|gb|AAX17103.1| cysteinyl-tRNA synthetase [Borrelia hermsii DAH]
Length = 481
Score = 266 bits (681), Expect = 4e-69, Method: Composition-based stats.
Identities = 144/498 (28%), Positives = 220/498 (44%), Gaps = 63/498 (12%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YNT + +++ + + + Y CGPTVY++AHIGN R I D+L + LR
Sbjct: 1 MLLKLYNTKTKSLSDIKNFSDTKV--YACGPTVYNYAHIGNLRTYIFEDLLIKSLRLL-- 56
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
+ V Y NITDI +DK+++ AR+ ++ I+ T+ F D
Sbjct: 57 KYNVNYAMNITDIGHLTGDFDEGEDKVVKAARERGLTVY------EISRFFTEAFFDDCA 110
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+L + P A+ +I MI +++ + +G Y N + FDTS YG + ++
Sbjct: 111 KLNIVYPDKVLVASEYIASMIEVVKVLEQNGFTYFVNGNVYFDTSRFNGYGQMAGINLNN 170
Query: 173 Q--KMGTRVPEKYHKKNPADFILWK---RSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+RV KKN +DF+LW + E W+SPWG G P WH+EC+AM+ Y
Sbjct: 171 FGRSSVSRVEIDLSKKNKSDFVLWFTNSKFKDQEMKWDSPWGFGYPSWHLECAAMNLDYF 230
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
DIH GG+D + HH NEIA + C + ++++H FL +E KMSKSN NFIT
Sbjct: 231 KSTLDIHLGGVDHVGVHHINEIAIAECYLN-KMWCDMFVHGEFLIMEDEKMSKSNNNFIT 289
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----SKWPQTSTS 343
I +L + R L HYR + FT L +I +K +S
Sbjct: 290 IKDL------ESDGFSPLDFRYFCLTAHYRTQLKFTFSNLRACKIARENMLNKLTFFYSS 343
Query: 344 KGIID--------------------PAVLSALYNDLNTVSAIQALHKLAREST-KNHDLL 382
D L + DL+ A+ L + ++ L
Sbjct: 344 LSQFDMALLNKNCENIESVSENKYYNNFLEKIAFDLSIPQALALLWDIVKDDDLSALLKL 403
Query: 383 PIFNASAHIL------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ +L G+ E NI + L++ER + K F AD IR+
Sbjct: 404 LLAFKFDEVLSLGLKEGVLREIERDRVNIDDTMHSLIEERRLAKLRKDFKRADEIREYFR 463
Query: 437 SKGFILEDYKNPDNGQRM 454
SKGF+L D + +R
Sbjct: 464 SKGFVLIDTEEGTKVKRG 481
>gi|313228816|emb|CBY17967.1| unnamed protein product [Oikopleura dioica]
Length = 636
Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats.
Identities = 151/521 (28%), Positives = 230/521 (44%), Gaps = 84/521 (16%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+K+ N+L R EF+ D ++ Y CGPTVYD +H+G+AR + FD++ R+LR Y
Sbjct: 19 PKLKVNNSLTRSKDEFRTADGKTVKWYSCGPTVYDHSHMGHARSYVSFDIIRRILRD-YF 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y NITDIDDKII+R+ ++ N + +++ +D L P
Sbjct: 78 GYDVFYQINITDIDDKIIKRS-----TVTDNSIFDALPRYWEKKYFEDMQALNIEDPDCL 132
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R + ++P+++ ++ II HG+AYE+N + F + + K+ + +G R
Sbjct: 133 TRVSEYVPEIVTFVEKIIEHGYAYESNGSVYFKVDHFDSSSNHYYAKLVPEAVGNREALA 192
Query: 183 Y----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++ +DF LWK S P EP W+SPWG+GRPGWHIECS M+S +GK D
Sbjct: 193 EGEGSLAAAASEKRSESDFALWKNSKPGEPSWDSPWGKGRPGWHIECSVMASDIMGKTMD 252
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + ++H G L + G KMSKS NFITI E L
Sbjct: 253 IHSGGVDLKFPHHDNELAQSEAYHANDNWVQYFLHTGHLTIAGCKMSKSLKNFITIKEAL 312
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------- 345
+ A IRL+ L+ + + +D++ L +A + +
Sbjct: 313 -------KKNSARQIRLSFLLHAWDKTLDYSDNTLADAVQYEKAISEFFANIKAALLNDD 365
Query: 346 ------------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--F 385
V L ++LNT A AL + + K F
Sbjct: 366 GILKKWGAPEKDLHAEFMAAQNDVHDKLCDNLNTAGACLALKDIVSATNKYLAKQENPDF 425
Query: 386 NASAHI-------------------LGIEVCKEHLNKNISIAI----EKLVQERLILLK- 421
++ +G V + N+N+ + + L Q R +
Sbjct: 426 KLLRNVGTYVTKIMKCFGCLNSEDQIGFPVEGQAQNQNMDQLVAPYLQCLAQFRQEIRNT 485
Query: 422 ---------MKKFSSADYIRK-QLESKGFILEDYKNPDNGQ 452
K D +R +L G LED +
Sbjct: 486 TRGDNSDLSKKLMQMCDDLRDMKLVDLGVRLEDKMDETGKP 526
>gi|156096861|ref|XP_001614464.1| cysteine -tRNA ligase [Plasmodium vivax SaI-1]
gi|148803338|gb|EDL44737.1| cysteine -tRNA ligase, putative [Plasmodium vivax]
Length = 686
Score = 266 bits (680), Expect = 5e-69, Method: Composition-based stats.
Identities = 147/546 (26%), Positives = 224/546 (41%), Gaps = 123/546 (22%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N+L R EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y + V
Sbjct: 119 NSLTRSKVEFVPQEKNQIKWYACGPTVYDAAHLGHARTYVSFDIIRRIL-VNYFKYDVFM 177
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
V NITDIDDKII+R+ +E S + + K +F +D +L L PT R + +
Sbjct: 178 VINITDIDDKIIKRSEEEKVS------FTELARKWECEFWEDMKKLNVLLPTAITRVSEY 231
Query: 129 IPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ Q+I+ I+ II + +AY + FD +++ + + +
Sbjct: 232 VDQIIHYIEKIIDNKYAYVSEEGSVYFDIDEFKKSPKHFYARMEPLSVKDETKILEGEGD 291
Query: 188 PA----------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V DIH GG
Sbjct: 292 LGVISKKKKNAYDFALWKSSKPNEPYWDSPWGKGRPGWHIECSTMASNILGSVLDIHSGG 351
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 352 VDLRFPHHDNELAQSEAFFDASQWVNYFLHSGHLHIEGLKMSKSLKNFITIKHMLS---- 407
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI-------------LLSKWPQTSTSK 344
+ IR+ L+ + ++++ + + L K +
Sbjct: 408 ---EYTPNQIRILFLLNKWDSFMNYSPNGESMVQCVEIDKFVFNFFALLEMKIKNFHLTN 464
Query: 345 GIIDPAVLSALYN----------------DLNTVSAIQALHKLARESTKN---------- 378
+ + N + NT I AL KL E
Sbjct: 465 SNLFWTQVDDNLNKLFRSTKSKVHQALLDNFNTPEVILALQKLITEINIYLQNEKIQIGL 524
Query: 379 -HDLLPIFNASAHILGIEVCKEHLNKNI--SIAI-----------------EKLVQERLI 418
+L + G+ + KN + KL+ R I
Sbjct: 525 LLELKHYISFILDTFGLVYGQAQGEKNDKFDELLHTLGTYRSNIRTTLQSNAKLI--RKI 582
Query: 419 LLKMKK---------------------FS---------------SADYIRKQ-LESKGFI 441
+ K ++ D +R + L + G +
Sbjct: 583 TKETKDATKKGEQECESSAAAQQRDLLYAEFVNSVKANNETLLKECDLLRDERLLNLGIL 642
Query: 442 LEDYKN 447
++D N
Sbjct: 643 IDDRPN 648
>gi|219849725|ref|YP_002464158.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219543984|gb|ACL25722.1| cysteinyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 400
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 145/415 (34%), Positives = 204/415 (49%), Gaps = 35/415 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL R F + +YVCG T YD H+G+AR IVFDVL R LR
Sbjct: 1 MQLFSTLSRIREPFSPPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLRRQG--A 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTY +NITD+DD + ERAR++ + + Q D L L PT PR
Sbjct: 59 TVTYCQNITDVDDPLFERARRDGV------NWYELAERQIAQLRADCADLNILPPTFAPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE----QKMGTRVP 180
+ + MI +I+ ++ GHAY + + F + P++G +R E P
Sbjct: 113 VSEEVAIMIPIIERLVELGHAYVVDGNVYFSIQTDPDFGRMARMGYAELLSIANQRGNNP 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LW+R P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DL
Sbjct: 173 HDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSIRYLGEQIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHH EIAQS A A IW+H G + L+G KMSKS GN + + L+
Sbjct: 233 IFPHHSCEIAQSESATGKRPFARIWMHVGLVWLDGEKMSKSLGNLVFARDALQMH----- 287
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------V 351
+R +L HYRE D+ + + E + + G V
Sbjct: 288 --HPDALRWYLLSEHYREDFDYRREAVARYEQYAADLRHALSLTGGTHSPLDVSRGRSDV 345
Query: 352 LSALYNDLNTVSAIQALH-------KLARESTKNHDLLPIFNASAHILGIEVCKE 399
++++ +DL+T +A+ +LH A E A +LG + +
Sbjct: 346 ITSMNDDLDTPAALASLHAMAGMIIDAAAEGRDVSTAQATVRDLALMLGFTLRDK 400
>gi|306817738|ref|ZP_07451480.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
gi|304649552|gb|EFM46835.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
Length = 538
Score = 266 bits (679), Expect = 6e-69, Method: Composition-based stats.
Identities = 145/342 (42%), Positives = 201/342 (58%), Gaps = 26/342 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ + EF+ + P + +Y+CGPTV H+G+ R + FDVL R LR E
Sbjct: 1 MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI++++R+ + + + ++F L + P P
Sbjct: 60 -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I L+Q +I GHAY + + F S+P+YGS + +++ E
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE AQS A A +W+HN +L L+G KMSKS GN + + LL
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
WPAPV+RLA++ THYR ++F+ L +A L K+
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKF 325
Score = 74.0 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 29/133 (21%)
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------SAHILGIEVC 397
+ ++AL +DLN A+ ALH+ + A +LG++
Sbjct: 397 LPEDFVAALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPA 456
Query: 398 KEHLNKNISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLES 437
+ S A + L+++R + + ++ AD +R LE+
Sbjct: 457 DSAWGASDSGASAGAGSKNRKDPSVDCLKSLVAALLEQRGAAKQSRDWARADALRDLLEA 516
Query: 438 KGFILEDYKNPDN 450
G + D
Sbjct: 517 SGLQITDTPTGAT 529
>gi|269976318|ref|ZP_06183314.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
gi|269935647|gb|EEZ92185.1| cysteinyl-tRNA synthetase [Mobiluncus mulieris 28-1]
Length = 538
Score = 266 bits (679), Expect = 7e-69, Method: Composition-based stats.
Identities = 144/342 (42%), Positives = 201/342 (58%), Gaps = 26/342 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ + EF+ + P + +Y+CGPTV H+G+ R + FDVL R LR E
Sbjct: 1 MKLYDSATHAVREFKPLTPGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI++++R+ + + + ++F L + P P
Sbjct: 60 -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I L+Q ++ GHAY + + F S+P+YGS + +++ E
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE AQS A A +W+HN +L L+G KMSKS GN + + LL
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
WPAPV+RLA++ THYR ++F+ L +A L K+
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKF 325
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 29/133 (21%)
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------SAHILGIEVC 397
+ ++AL +DLN A+ ALH+ + A +LG++
Sbjct: 397 LPEDFVAALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPA 456
Query: 398 KEHLNKNISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLES 437
+ S A + L+++R + + ++ AD +R LE+
Sbjct: 457 DSAWGASDSGASAGAGSKNRKDPSADCLKSLVAALLEQRGAAKQSRDWARADALRDLLEA 516
Query: 438 KGFILEDYKNPDN 450
G + D
Sbjct: 517 SGLQITDTPAGAT 529
>gi|209877248|ref|XP_002140066.1| cysteinyl-tRNA synthetase [Cryptosporidium muris RN66]
gi|209555672|gb|EEA05717.1| cysteinyl-tRNA synthetase, putative [Cryptosporidium muris RN66]
Length = 591
Score = 266 bits (679), Expect = 7e-69, Method: Composition-based stats.
Identities = 129/403 (32%), Positives = 197/403 (48%), Gaps = 33/403 (8%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N+L TEF ++ I Y CGPTVYD AH+G+AR + FD++ R+L Y V
Sbjct: 44 NSLTAGKTEFIPVNGKRINWYACGPTVYDSAHLGHARTYVTFDIVRRILED-YFGYDVYM 102
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
V NITDIDDKII+R+ ++ + + + ++F D L P R +
Sbjct: 103 VMNITDIDDKIIKRSIEQKRDNFL-----DLAREYEKEFFDDMHALNVKPPDIITRVSEF 157
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSI----------PNYGSFSRRKIDEQKMGTR 178
IP+++ I II G AYE + + FD ++ S + + G
Sbjct: 158 IPEILDYISTIIYRGFAYECDGSVYFDINAFRSKEGHFYGRMEPKSVADESKVLEGEGDL 217
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
KK+P DF LWK++ P EP W+SPWG+GRPGWHIECSAM+S+ LG DIH GG+
Sbjct: 218 GEHSKDKKSPLDFALWKKAKPGEPFWDSPWGKGRPGWHIECSAMASNTLGFPIDIHSGGI 277
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH+NE+AQS + N ++H+G L++ G KMSKS NF TI ++L
Sbjct: 278 DLRFPHHDNELAQSEAHYDQPQWVNYFLHSGHLHIHGAKMSKSLKNFTTIRDVL------ 331
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------- 348
+ + IR+ L+ + PI+F+ + + + + K + +
Sbjct: 332 -KEYSPRHIRMLFLLHKWDGPINFSPETSLKEAVAVDKVFINFFANVKANLRISFIENPL 390
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
+ L T A + + K R++ +++ +
Sbjct: 391 KHDIEEEKLRLATECAAEKIDKQLRDNLNTPEVISSLQYLVSV 433
>gi|26332939|dbj|BAC30187.1| unnamed protein product [Mus musculus]
Length = 581
Score = 265 bits (677), Expect = 1e-68, Method: Composition-based stats.
Identities = 146/521 (28%), Positives = 225/521 (43%), Gaps = 90/521 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 68 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 126
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 127 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 180
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + +
Sbjct: 181 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPSATAEPG---DSD 237
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 238 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 297
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI + L +++
Sbjct: 298 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFL-------KTF 350
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
V RL L T+YR I+++ L EA+ LL L+
Sbjct: 351 SPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEEDVL 410
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
ND +T A+ + L + + ++
Sbjct: 411 WERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVFGAIIS 470
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------ILLK-- 421
+GI + S +++LV+ RL K
Sbjct: 471 YVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQ 530
Query: 422 --MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ + D +R+ L + G ++D G + W+
Sbjct: 531 LQERQPLLEACDTLRQDLVTHGINVKDR-----GSAASTWE 566
>gi|67809679|gb|AAY81974.1| cysteinyl-tRNA synthetase [Wolbachia pipientis]
Length = 404
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 170/418 (40%), Positives = 238/418 (56%), Gaps = 36/418 (8%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
IGNAR ++V+DVL++LL++ YG VTYVRNITDIDDKII A ++ N I IT
Sbjct: 1 IGNARSVVVYDVLFQLLKFCYG--KVTYVRNITDIDDKIINAASEK------NSNIESIT 52
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ + F D + C PT++P+AT ++ +I LI++++ GHAYE++ + F+ S
Sbjct: 53 TYYIKAFHDDMESINCKKPTYEPKATENVDYIIKLIEHLLQSGHAYESDKHVYFNIESYH 112
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG----WESPWGRGRPGWH 216
YG+ S +K DE G+RV +KK+P DF+LWK + ++ W SPWG GRPGWH
Sbjct: 113 EYGALSGKKTDELVPGSRVEVNENKKHPGDFVLWKPANDIDYKLSSYWNSPWGEGRPGWH 172
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
IECSAMS YLGK FDIHGGG+DL FPHHENEIAQS A A W+HNGFL +
Sbjct: 173 IECSAMSYAYLGKDFDIHGGGIDLQFPHHENEIAQSKSAFAGSMFAKYWMHNGFLTVNEE 232
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS N + + +LL++ VIR A+L THYR+P D+T +++A+ L+K
Sbjct: 233 KMSKSLFNIVKVRDLLDS------GIKGEVIRYALLKTHYRKPPDWTENVISDAQETLNK 286
Query: 337 WPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDL 381
+ + S I + AL NDLN A+ LH++A + K L
Sbjct: 287 FYRLSRGLDTINIDESNAEISKDFIDALKNDLNIPEALAILHEMAAKINKMSNESEKLKL 346
Query: 382 LPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
F SA +G+ + IE+L+ R + K +++AD IR QL+
Sbjct: 347 TESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLK 404
>gi|242024681|ref|XP_002432755.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212518240|gb|EEB20017.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 530
Score = 265 bits (676), Expect = 1e-68, Method: Composition-based stats.
Identities = 145/511 (28%), Positives = 236/511 (46%), Gaps = 71/511 (13%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ IKIYN ++ + ++ + ++ Y+CGPTVY+ +H+G+A + FD++ R+L +
Sbjct: 38 ETDIKIYNKIKNEKVPLILLNKNFVKWYLCGPTVYNSSHVGHASTYVRFDIIRRILEQNF 97
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G + V ITDIDDKII++A ++ + K +F K+ L L+PT
Sbjct: 98 GIRPVV-ALGITDIDDKIIKKAN------LLSTNFKTLAKKYELEFFKNLKDLNVLSPTF 150
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
R ++HIP +I I I+ AY + FDT+S YG + ++
Sbjct: 151 VLRVSDHIPHIIDFIYKIVDKRQAYVSKEGCVYFDTASFGKYGKLNPIPLENSDPVRIGK 210
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ Y DF LWK + P EP W+SPWG GRPGWHIECSAM+S G D+H GG+DL
Sbjct: 211 KSY-----LDFTLWKAAKPGEPFWDSPWGNGRPGWHIECSAMASEIFGSKMDLHSGGIDL 265
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE AQSC ++ N W+H+G L ++ KMSKS NFITI+E L +
Sbjct: 266 KFPHHENEEAQSCSYHDCDQWVNYWLHSGQLMIDDEKMSKSLNNFITIDEFL-------K 318
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL----------SKWPQTSTSKGIIDPA 350
++ + +R+ +HYR + ++ + + A + + +++ KG ++ +
Sbjct: 319 TYSSDHMRMFCFESHYRNALHYSSESMKTAVSTCNLFSDFLMDANSYIKSNWYKGNVEES 378
Query: 351 VL--------SALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFN 386
++ L +D NT + +L L + + + + +
Sbjct: 379 IILKMSNVIKDCLMDDFNTSQCLISLMNLTKNTVRMMNEEVTVTSSRSPGAVAAVKTYVE 438
Query: 387 ASAHILGIEVCKEHLNKNISI---------AIEKLVQERLILLKMKK-------FSSADY 430
G ++ + AI + R L +K S D
Sbjct: 439 GLLKSFGFQLDTALSQEGEDDIKMEFILNSAINFRQEVRKEALALKDKTLKGNLLKSCDS 498
Query: 431 IRKQLESKGFILEDY-KNPDNGQRMTRWKQK 460
R+ L + G L+D KN + T+ + K
Sbjct: 499 FRENLGTVGITLKDQEKNATSWGIKTKKELK 529
>gi|162448886|ref|YP_001611253.1| hypothetical protein sce0616 [Sorangium cellulosum 'So ce 56']
gi|161159468|emb|CAN90773.1| cysS1 [Sorangium cellulosum 'So ce 56']
Length = 529
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 158/545 (28%), Positives = 246/545 (45%), Gaps = 117/545 (21%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++TL +K+ P +RMY CGPT YD AH+G+ R + D+L R LR
Sbjct: 1 MPALRLHDTLTQKLAPLAPRRPGEVRMYCCGPTTYDVAHVGHGRAALAPDILVRHLRARG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YVRN+TD+DDKI++R+ + + ++++ + + +D L CL P
Sbjct: 61 --LRVVYVRNVTDVDDKILQRSAESG------EPPMDLSARMARLYQEDVAALGCLTPDV 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN-----------EIIFDTSSIPNYGSFSRRKI 170
+P+ + HIP++I L++ +I G AY ++ + S P+YG S+R +
Sbjct: 113 EPKVSEHIPEVIALVERLIERGAAYVVERPGDVRDVRDVRDVYYSVRSFPSYGKLSKRNL 172
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
DE ++G RV K++P DF LWK P GW+SPWG+GRPGWHIECSAM+ YLG
Sbjct: 173 DELRVGARVGPCEDKRDPLDFALWKGVAPGGWGWDSPWGKGRPGWHIECSAMAGRYLGAG 232
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIE-KTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
FD+H GG+DL+FPHHENEIAQS A A+IWIHNGF+N++ KM+KS GNF+ +
Sbjct: 233 FDVHCGGMDLVFPHHENEIAQSEAAHPEGAPLASIWIHNGFVNVDKEKMAKSLGNFVKLR 292
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT----------EAEILLSKWPQ 339
++ +R +L HYR P++F + EAE +
Sbjct: 293 DVYARN-------DPEALRYFLLTVHYRGPLEFDTHKRDDGRVVFPGVVEAERRVDYLYA 345
Query: 340 TSTSKGIIDP-----------------------------------AVLSALYNDLNTVSA 364
T + +AL +DLNT
Sbjct: 346 TLDRLSALSALAGPPAAGEGAEPELPARLPKGFAALAALADGAPARAAAALDDDLNTPVV 405
Query: 365 IQALHKLARESTKNHDLL---------------------PIFNASAHILGIEVCKEHLNK 403
+ + ++A+ + + D +S +LG+ + +
Sbjct: 406 LSIIAEVAKAANELADAAQRRGKDQDVARAAPPLARRLHAALRSSLDVLGLLQTPSPVYQ 465
Query: 404 NISIAIEKLVQERLIL----LKM--------------KKFSSADYIRKQLESKGFILEDY 445
+ ++RL L + K F+ D +RK+LE G + D
Sbjct: 466 ARTQ------EQRLGLLGTTRQAIEAKLAERAAARAAKDFARGDALRKELERDGIEVADS 519
Query: 446 KNPDN 450
Sbjct: 520 PTGTT 524
>gi|147901608|ref|NP_001083370.1| probable cysteinyl-tRNA synthetase, mitochondrial precursor
[Xenopus laevis]
gi|82237606|sp|Q6PA41|SYCM_XENLA RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|38014676|gb|AAH60463.1| MGC68641 protein [Xenopus laevis]
Length = 572
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 150/527 (28%), Positives = 225/527 (42%), Gaps = 96/527 (18%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK+YN+L RK DP+ Y CGPTVYD AH+G+A + FD + R+L +G
Sbjct: 55 IKVYNSLTRKKEPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDTIRRILLKVFGID 114
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +TDIDDKII+RA++ +N + + Q F +D T L L PT R
Sbjct: 115 IV-MAMVVTDIDDKIIKRAKE------LNISPVALARTYEQDFKQDMTALRVLPPTVYMR 167
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T IPQ+I IQ II +GHAY + + FD SI + + + +
Sbjct: 168 VTESIPQIISFIQQIIANGHAYSTSQGNVYFDVQSIGDQYGKFNDSFCDAASESALQ--- 224
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK S P EP W SPWG+GRPGWHIECS ++S GK DIH GG+DL FP
Sbjct: 225 DKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLDIHTGGIDLAFP 284
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRS 301
HHENEIAQ + + N ++H G L+L KMSKS N++TI E L +S
Sbjct: 285 HHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLKNYVTIKEFL-------KS 337
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------------- 340
+ +R+ L + Y+ ++++ + + +A L
Sbjct: 338 FSPDHLRMFCLRSKYKSAVEYSKESMHDAVNTLHLISSFVDDAKAYLKGQLICQPVQETL 397
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------------NHDLL 382
V +A +D +T A+ A+ L + ++
Sbjct: 398 LWQRLNETKVNVKAAFSDDFDTPRAVDAVLDLIHHGNRQLKAVSKESSSPRSPIVYGAMV 457
Query: 383 PIFNASAHILGIE------VCKEHLNKNISIAIEKLVQERLILL---------------K 421
I+GI +E + + +E++V R + +
Sbjct: 458 SYIEQFLEIMGISLGQNQVPAEERHSAMLFNVVEEMVSFRSKVRNYSLATNESATAIGQE 517
Query: 422 MK-KFSS---------------ADYIRKQLESKGFILEDYKNPDNGQ 452
K ++ D R+ L G ++D + +
Sbjct: 518 EKQQYKERRRQLLLEREPLLQACDIARQHLAVYGINVKDRGDTSTWE 564
>gi|189409152|ref|NP_077210.1| probable cysteinyl-tRNA synthetase, mitochondrial [Mus musculus]
gi|148690118|gb|EDL22065.1| mCG11180, isoform CRA_a [Mus musculus]
Length = 552
Score = 264 bits (674), Expect = 2e-68, Method: Composition-based stats.
Identities = 146/521 (28%), Positives = 224/521 (42%), Gaps = 89/521 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + +
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDL--HARGDKYGKLVNTVPSATAEPAGDSD 208
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 209 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 268
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI + L +++
Sbjct: 269 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFL-------KTF 321
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
V RL L T+YR I+++ L EA+ LL L+
Sbjct: 322 SPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEEDVL 381
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
ND +T A+ + L + + ++
Sbjct: 382 WERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVFGAIIS 441
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------ILLK-- 421
+GI + S +++LV+ RL K
Sbjct: 442 YVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQ 501
Query: 422 --MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ + D +R+ L + G ++D G + W+
Sbjct: 502 LQERQPLLEACDTLRQDLVTHGINVKDR-----GSAASTWE 537
>gi|300123539|emb|CBK24811.2| unnamed protein product [Blastocystis hominis]
Length = 595
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 148/511 (28%), Positives = 218/511 (42%), Gaps = 93/511 (18%)
Query: 23 PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
P + Y CGPTVYD AH+G+AR + D++ R+LR Y V +V NITDIDDKII+R
Sbjct: 3 PRKVLWYSCGPTVYDVAHMGHARTYLSQDIIMRILRD-YFNYDVQFVMNITDIDDKIIKR 61
Query: 83 ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
+ + + + K +F++D L C R + ++ ++I +IQ II +
Sbjct: 62 STEAGI------PFTELARKYENEFMEDMKTLGCRTANVITRVSEYVDEIIEMIQGIINN 115
Query: 143 GHAYEANNEIIFDTSSIPNYG--------------SFSRRKIDEQKMGTRVPEKYHKKNP 188
G+AYEAN + FDT+S S + K++P
Sbjct: 116 GYAYEANGSVYFDTTSFQKNHVYGKLSTAHAVLSLSLVPEMVGNVNTEEEQDFASEKRHP 175
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL----GKVFDIHGGGLDLIFPH 244
DF LWK S P EP W SPWG GRPGWHIECSAMS D+H GG+DL PH
Sbjct: 176 NDFALWKASKPGEPMWNSPWGAGRPGWHIECSAMSFSIFKTISDGRIDVHSGGVDLRLPH 235
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
H NE+AQS ++ N ++H G LN++G KMSKS NFITI + L + +
Sbjct: 236 HTNEMAQSEAYMECSQSVNYFLHTGHLNIDGLKMSKSLKNFITIRQTL-------QQFTP 288
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAE----------------------ILLSKWPQT-- 340
IR+ L+ + ++++ + EA +W
Sbjct: 289 SQIRIYFLLHKWNTTMNYSDGAMEEARAKEKLFAEFFHNVKATLRQLTADQPQRWDDAEV 348
Query: 341 --STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------- 387
+ +V + L +D +T A++AL L R + + A
Sbjct: 349 QLNAQLDAARTSVHTCLCDDFDTAGAMEALEGLVRAVYRYLETAKHIVAPLVLSCAGFVS 408
Query: 388 -SAHILGIEVCKEHL-----------NKNISIAIEKLVQERLILLKMK-K----FSSADY 430
+ G+ + + +S +E L + R ++ K + D
Sbjct: 409 QMFRVFGLIEPEPKIGFAAGEEAADREAVLSPVVEILSKFRTVVKKNRADPAALLKLCDE 468
Query: 431 IRKQ-LESKGFILEDYKNPDNGQRMTRWKQK 460
IR L G LED N T WK +
Sbjct: 469 IRDDILPFVGIRLEDTAN------GTIWKLE 493
>gi|12845041|dbj|BAB26596.1| unnamed protein product [Mus musculus]
Length = 552
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 146/521 (28%), Positives = 223/521 (42%), Gaps = 89/521 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + +
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDL--HARGDKYGKLVNTVPSATAEPAGDSD 208
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 209 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 268
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI + L +++
Sbjct: 269 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFL-------KTF 321
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
V RL L T+YR I+++ L EA+ LL L+
Sbjct: 322 SPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEEDVL 381
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
ND +T A+ + L + + +
Sbjct: 382 WERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVFGAITS 441
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------ILLK-- 421
+GI + S +++LV+ RL K
Sbjct: 442 YVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQ 501
Query: 422 --MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ + D +R+ L + G ++D G + W+
Sbjct: 502 LQERQPLLEACDTLRQDLVTHGINVKDR-----GSAASTWE 537
>gi|289064335|gb|ADC80543.1| cysteine aminoacyl-tRNA synthetase [Toxoplasma gondii]
Length = 904
Score = 263 bits (673), Expect = 3e-68, Method: Composition-based stats.
Identities = 141/558 (25%), Positives = 220/558 (39%), Gaps = 131/558 (23%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ EF + + Y CGPTVYD +H+G+AR + FDV+ R++ Y VT
Sbjct: 251 NSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YLNYDVTM 309
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
NITDIDDKII+R+ ++ + ++F D T L PT R + +
Sbjct: 310 CMNITDIDDKIIKRSTEQGVD------FLTLARHWEKEFFNDMTALNVRLPTVVTRVSEY 363
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-------- 180
IP+++ LI+ I+ +G+ YE+ + FDT + +++ +
Sbjct: 364 IPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVLEGEGEL 423
Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK++ EP W+SPWG+GRPGWHIECSAM+ L DIH GG+
Sbjct: 424 GLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLDIHSGGI 483
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH+NE+AQS A+ + N ++H+G L++ G KMSKS NFITI E L
Sbjct: 484 DLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECLSR---- 539
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSKG 345
+ A IRL LM + ++++ T + + K +
Sbjct: 540 ---FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDNFFALVKAKLRDATPVSD 596
Query: 346 IIDPAV-----------------------LSALYNDLNTVSAIQALHKLARESTKN---- 378
A+ ++ NT A+ AL L +
Sbjct: 597 YAQKWTSDDFALNETLRATKEQASASAGVHKAILDNFNTPEALVALQHLMSAANSYLNQK 656
Query: 379 ----------HDLLPIFNASAHILGIEVCKE--------HLNKNISIAIEKLVQ----ER 416
++ I G+ E + + ++ LVQ R
Sbjct: 657 TGEDVKAPLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQCLGAFR 716
Query: 417 LILLK---------MKKFSS-----------------------------------ADYIR 432
I+ + D +R
Sbjct: 717 EIVRTSASHGMRVVNQDLKRVAASPVGSEVSPSDEEGKGDLLASLSETMRSLLQACDDVR 776
Query: 433 K-QLESKGFILEDYKNPD 449
+L G +L+D +
Sbjct: 777 DKKLPELGILLQDRPDGT 794
>gi|115502847|sp|Q8BYM8|SYCM_MOUSE RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|148690122|gb|EDL22069.1| mCG11180, isoform CRA_e [Mus musculus]
Length = 551
Score = 263 bits (673), Expect = 4e-68, Method: Composition-based stats.
Identities = 146/521 (28%), Positives = 225/521 (43%), Gaps = 90/521 (17%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + +
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPSATAEPG---DSD 207
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 208 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 267
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGGRSW 302
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI + L +++
Sbjct: 268 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDFL-------KTF 320
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------- 355
V RL L T+YR I+++ L EA+ LL L+
Sbjct: 321 SPDVFRLFCLRTNYRSAIEYSDSTLVEAKHLLLGLASFVEDARAYVKGQLTCGPVEEDVL 380
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-----------------HDLLP 383
ND +T A+ + L + + ++
Sbjct: 381 WERLTSTKKAVKAALANDFDTPRAVNTILDLVHHANRQLRAVSKEASGPRSPTVFGAIIS 440
Query: 384 IFNASAHILGIEVCKEHLNKNISI------AIEKLVQERL--------------ILLK-- 421
+GI + S +++LV+ RL K
Sbjct: 441 YVEQFFETVGISLANRQCVSGDSSTVTLRCVVDELVRFRLKVRQYALDTPGAAGEARKRQ 500
Query: 422 --MKK--FSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ + D +R+ L + G ++D G + W+
Sbjct: 501 LQERQPLLEACDTLRQDLVTHGINVKDR-----GSAASTWE 536
>gi|298246065|ref|ZP_06969871.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
gi|297553546|gb|EFH87411.1| cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
Length = 395
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 134/408 (32%), Positives = 205/408 (50%), Gaps = 33/408 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL + I F + +YVCG T YD H+G+A + FD L R L
Sbjct: 1 MKLFNTLTQSIDPFTPLKQGLATLYVCGVTPYDTTHLGHAFTYVSFDTLIRYLEAQG--I 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TDIDD ++ +AR+ +N A + + T +F+ D L P R
Sbjct: 59 TVRYVQNVTDIDDDVLRKARE------LNMAWDELGRRETARFLGDMDALNVRRPDVYAR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR--------RKIDEQKMG 176
AT+ IP ++ ++Q+++ G AY + + + P++G+ R +D
Sbjct: 113 ATDAIPDIVEIVQDLVEKGLAYVSEGCVFYSVKQDPDFGTLGRAIGLNDYQSMLDVANER 172
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE K +P DF+LW+ P EP W SPWG GRPGWHIECSAMS +LG+ DIHGG
Sbjct: 173 GNFPEDKRKHDPLDFVLWQAQAPGEPAWPSPWGPGRPGWHIECSAMSIRHLGQQIDIHGG 232
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHH EIAQS + + W+H G + +G KMSKS GN I+ LL
Sbjct: 233 GADLAFPHHTCEIAQSEHYTGKKPFSQFWMHTGMVYQDGEKMSKSLGNLTLISNLL---- 288
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ---RLTEAEILLSKWPQ-----TSTSKGIID 348
+++ VIR+ + HYR+P + T + + E L + + + +
Sbjct: 289 ---KTYSPDVIRVTLQSHHYRQPWECTPEDLSKAQETIELFKQVRRLVGEESHGEDAQVR 345
Query: 349 PAVLSALYNDLNTVSAIQALHKLARE--STKNHDLLPIFNASAHILGI 394
A+ NDL+ +A+ L + A+ + ++ + A +LG+
Sbjct: 346 ALFQQAMENDLDAPTAVSGLREAAQTVIANRDLNAGAEVIRQARVLGL 393
>gi|88608185|ref|YP_506222.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
gi|109894911|sp|Q2GE74|SYC_NEOSM RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|88600354|gb|ABD45822.1| cysteinyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
Length = 507
Score = 263 bits (672), Expect = 4e-68, Method: Composition-based stats.
Identities = 155/402 (38%), Positives = 212/402 (52%), Gaps = 27/402 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K++++NTL EF + +RMYVCGPTVYD HIGN R +V+D++YR+L +
Sbjct: 1 MKLRVHNTLSGLKEEFFPLSSEVVRMYVCGPTVYDVPHIGNIRASVVYDIVYRVLLKLF- 59
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YVRNITD+DDKII A + F + L CL+PT +
Sbjct: 60 -PEVIYVRNITDVDDKIITAASVRGVK------CDKVALHYEHIFHEHLGLLNCLSPTVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+AT +I +MI +IQ +I +G+AY + FD S YG S+RK ++ G RV +
Sbjct: 113 PKATQNIGKMISMIQALIDNGNAYSVGGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEKD 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P DFILWK + W SPWG GRPGWHIECSAM+ LG FDIHGGG DL F
Sbjct: 173 VDKKHPGDFILWK--SDDHVYWPSPWGNGRPGWHIECSAMTLATLGADFDIHGGGADLKF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE AQS CA+ + A W+HNGFL + G KMSKS GN + ++ L+E+
Sbjct: 231 PHHENERAQSMCANPGSQFARYWVHNGFLTVNGEKMSKSLGNVVNVDTLVES------GV 284
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
VIR ++ THY +P+D+ + EA L K+ G++ + ++
Sbjct: 285 TPNVIRFVLISTHYSKPLDWNDAMVGEAINSLIKFKLALLDSGVLPKSKSHIGSLNIGVC 344
Query: 363 SAIQALHK-----------LARESTKNHDLLPIFNASAHILG 393
S + +AR K + N + G
Sbjct: 345 SDNAEDEEVDPRSCASEVIVARNKRKAKNFSKKMNEIFNKFG 386
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 31/133 (23%), Positives = 51/133 (38%), Gaps = 11/133 (8%)
Query: 330 AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE-----STKNHDLLPI 384
+ +K+ I + +D NT AI LHKL+ + K ++L +
Sbjct: 378 MNEIFNKFGGLGDDCSIYTREFFECMADDFNTPGAIAVLHKLSDGVRLVGAEKVNNLAHL 437
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
LGI++ + I +Q+R + K F AD IR L G ++ D
Sbjct: 438 LYNLLIFLGIDLGVRQ-SSVSEDFIRSQLQKRADCKRQKDFVEADRIRFALAKMGVLIRD 496
Query: 445 YKNPDNGQRMTRW 457
+K+ T W
Sbjct: 497 HKHAP-----TDW 504
>gi|269926313|ref|YP_003322936.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
gi|269789973|gb|ACZ42114.1| cysteinyl-tRNA synthetase [Thermobaculum terrenum ATCC BAA-798]
Length = 392
Score = 263 bits (672), Expect = 5e-68, Method: Composition-based stats.
Identities = 139/407 (34%), Positives = 204/407 (50%), Gaps = 35/407 (8%)
Query: 5 IKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+Y+TL +I + + + + +YVCG T YD H+G+A + FDVL R L
Sbjct: 1 MKLYDTLTNQI---KPLAGEDGRVSVYVCGITPYDTTHLGHAFLYVTFDVLIRYLESTGY 57
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V Y +N+TDIDD I+ +A++ +N + + T +F+ D L P H
Sbjct: 58 Q--VIYTQNVTDIDDDILRKAKE------LNMFYLDLAERETNRFLSDLRALNVRMPDHY 109
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
P AT I M+ ++ +I GHAY + + FD + +G S+ +E R
Sbjct: 110 PHATQEIDGMVEIVSKLIDKGHAYVRDGNVYFDIDTYEGFGQLSKLSREEMIAIARERGG 169
Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
PE + +P DF+LW+RS EP W+SPW +GRPGWHIECS MS YLG IHGGG
Sbjct: 170 NPEDPLRDDPLDFLLWQRSAEGEPAWDSPWSKGRPGWHIECSTMSLKYLGASLTIHGGGA 229
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHE E AQS C I W+H G L +G KMSKS GN + ++ LL
Sbjct: 230 DLIFPHHECERAQSECYTGISPFVKHWMHVGMLRYQGEKMSKSLGNLVLVDRLL------ 283
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
+++ +RL ++ HY+E ++ + EAE L K ++ D D
Sbjct: 284 -QNYSPDAVRLVLISHHYQESWEYQDSMIEEAEKLAQKIRIAASLAPAHDAEFQDTYEFD 342
Query: 359 ---------LNTVSAIQALHKLARES--TKNHDLLPIFNASAHILGI 394
LNT A++ L L+ E +++ + A LG+
Sbjct: 343 LFRQAMEDNLNTPRAVELLRSLSEEIIQNDDNNKACVLRQIATTLGL 389
>gi|163846330|ref|YP_001634374.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222524094|ref|YP_002568565.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
gi|163667619|gb|ABY33985.1| cysteinyl-tRNA synthetase [Chloroflexus aurantiacus J-10-fl]
gi|222447973|gb|ACM52239.1| cysteinyl-tRNA synthetase [Chloroflexus sp. Y-400-fl]
Length = 398
Score = 263 bits (671), Expect = 5e-68, Method: Composition-based stats.
Identities = 146/410 (35%), Positives = 203/410 (49%), Gaps = 35/410 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++TL R F + +YVCG T YD H+G+AR IVFDVL R L++
Sbjct: 1 MQLFSTLSRTRETFTVPTDRPVTLYVCGVTPYDTTHMGHARTFIVFDVLVRYLQWQG--A 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y +N+TD+DD + ERAR++ + + +Q D L L PT PR
Sbjct: 59 TVRYCQNVTDVDDPLFERARRDGV------QWDELAERQIRQLRADCADLNILPPTFFPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE----QKMGTRVP 180
+ + MI +I+ +I GHAY + + F + P++G +R E P
Sbjct: 113 VSEEVGTMIPIIERLIELGHAYVVDGNVYFSIQTDPDFGRMARMGYSELLAIANQRGNNP 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LW+R P EP WESPWG GRPGWHIECSAMS YLG+ DIHGGG DL
Sbjct: 173 HDPNKRDPLDFVLWQRGNPDEPKWESPWGLGRPGWHIECSAMSQRYLGEQIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHH EIAQS A A W+H G + L+G KMSKS GN + + L R
Sbjct: 233 IFPHHSCEIAQSESATGKRPFARFWMHVGLVWLDGEKMSKSLGNLVFARDAL-------R 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------PAV 351
IR +L HYRE D+ L E + Q + G V
Sbjct: 286 EHHPDAIRWYLLSEHYREDFDYRRDALVRFEQYAADLRQALSVTGGSHSPLDVSRGREDV 345
Query: 352 LSALYNDLNTVSAIQALHKL-------ARESTKNHDLLPIFNASAHILGI 394
++A+ +DL+T + + LH + A+E + A +LG
Sbjct: 346 IAAMNDDLDTPTVLAVLHTMAGMIIDGAKEGRDVSSAQAVVRDLALMLGF 395
>gi|307701600|ref|ZP_07638617.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
gi|307613279|gb|EFN92531.1| cysteine--tRNA ligase [Mobiluncus mulieris FB024-16]
Length = 538
Score = 262 bits (670), Expect = 7e-68, Method: Composition-based stats.
Identities = 144/342 (42%), Positives = 201/342 (58%), Gaps = 26/342 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ + EF+ ++ + +Y+CGPTV H+G+ R + FDVL R LR E
Sbjct: 1 MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI++++R+ + + + ++F L + P P
Sbjct: 60 -VTYVRNVTDIDDKILKKSRE------LGVPWWALAAHFEREFDWAYRALNTVPPDVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I L+Q +I GHAY + + F S+P+YGS + +++ E
Sbjct: 113 ATGHIPQQIALVQRLIDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE AQS A A +W+HN +L L+G KMSKS GN + + LL
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
WPAPV+RLA++ THYR ++F+ L +A L K+
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKF 325
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 45/133 (33%), Gaps = 29/133 (21%)
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------SAHILGIEVC 397
+ ++AL +DLN A+ ALH+ + A +LG++
Sbjct: 397 LPEDFVAALDDDLNVPGALPALHRAVKTGHSALASGDTAAAAAQALQLRAMLDVLGLDPA 456
Query: 398 KEHLNKNISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLES 437
+ S A + L+++R + + ++ AD +R LE+
Sbjct: 457 DSAWGASDSGASAGAGSKNRKDPSVDCLKSLVAALLEQRGAAKQSRDWARADALRDLLEA 516
Query: 438 KGFILEDYKNPDN 450
G + D
Sbjct: 517 SGLQITDTPAGAT 529
>gi|70953127|ref|XP_745684.1| cysteine--tRNA ligase [Plasmodium chabaudi chabaudi]
gi|56526086|emb|CAH76958.1| cysteine--tRNA ligase, putative [Plasmodium chabaudi chabaudi]
Length = 582
Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats.
Identities = 147/541 (27%), Positives = 229/541 (42%), Gaps = 111/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y +
Sbjct: 22 NLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILT-NYFK 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDKII+R+ +E + + K +F +D L L PT
Sbjct: 81 YDVFMVINITDIDDKIIKRSEEEKV------NFTELARKWEYEFWEDMKNLNVLLPTSIT 134
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
R + ++ ++I I+ II + +AY + + FD + + +++ +
Sbjct: 135 RVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKIL 194
Query: 181 --------EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+KKN DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML 314
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTSTSK 344
+ + + IR+ L+ + ++++ +
Sbjct: 315 -------KKYTSNQIRILFLLNKWDSFMNYSPNGEGMTQCIEIDKFFTNFFALINMKIKN 367
Query: 345 GIIDPAVLSALYND---------------------LNTVSAIQALHKLARESTKN----- 378
++ L D NT A+ A+ KL E
Sbjct: 368 FDLNNCDLYWNDTDNKLNNTFRQTKTNIHNFFLDNFNTPEALVAIQKLITEINIYLQNGK 427
Query: 379 ------HDLLPIFNASAHILGI--EVCKEHLNKNISIA----------IEKLVQE----- 415
+L N + G+ + ++ N I ++Q+
Sbjct: 428 VQIGLLLELKHYINFIMNTFGLFYDQAQKAKPNNFDNLLHVLGSYRSNIRTILQKNAKLI 487
Query: 416 RLILLKMK----------------KF------------SSADYIRKQ-LESKGFILEDYK 446
R ++K F D +R Q L + G +++D
Sbjct: 488 RKASKEIKIDSSDPATVENNNKINDFIKEIKTNNEDLLKECDLLRDQHLLNMGILIDDRP 547
Query: 447 N 447
N
Sbjct: 548 N 548
>gi|67623595|ref|XP_668080.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis TU502]
gi|54659275|gb|EAL37860.1| cysteinyl-tRNA-synthetase [Cryptosporidium hominis]
Length = 425
Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats.
Identities = 123/342 (35%), Positives = 179/342 (52%), Gaps = 23/342 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ + N++ TEF ++ + Y CGPTVYD AH+G+AR + FD++ R+L Y
Sbjct: 40 LMLNNSMTGGKTEFIPVNGRRVNWYACGPTVYDSAHLGHARNYVTFDIIRRVLED-YFGY 98
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V NITDIDDKII+R+ ++ + + + +F D L P R
Sbjct: 99 DVYLVMNITDIDDKIIKRSNEQKR-----ENFLDLAREFELEFFDDMKALNVKMPDVITR 153
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI----------PNYGSFSRRKIDEQK 174
+ IP++I I II G AYE+ + FD S S + +
Sbjct: 154 VSEFIPEIIDFISTIISRGFAYESEGSVYFDVESFRADEKHVYGRMEPKSVADVNRLLEG 213
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
G KK+P DF LWK++ P EP W+SPWG+GRPGWHIECS M+S+ LG DIH
Sbjct: 214 EGELGEHLKDKKSPLDFALWKKAKPEEPCWDSPWGKGRPGWHIECSVMASNTLGFPIDIH 273
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GG+DL FPHH+NE+AQS + N ++H+G L++ G KMSKS NF TI E+L
Sbjct: 274 SGGIDLRFPHHDNELAQSEAHYDQAQWVNYFLHSGHLHIHGSKMSKSLKNFTTIQEIL-- 331
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
+ IR+ L+ + P++++ + + I + K
Sbjct: 332 -----KENSPRHIRMLFLLHKWDAPMNYSPETSLQEAIAVDK 368
>gi|284043153|ref|YP_003393493.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
gi|283947374|gb|ADB50118.1| cysteinyl-tRNA synthetase [Conexibacter woesei DSM 14684]
Length = 456
Score = 262 bits (670), Expect = 8e-68, Method: Composition-based stats.
Identities = 148/483 (30%), Positives = 224/483 (46%), Gaps = 60/483 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ I I++T ++ + +P + +Y CGPTVY H+GNARP +VF + R L +
Sbjct: 1 MRTIAIHDTRSGRLLPLEPREPGKVGIYACGPTVYGRIHVGNARPFVVFSLYKRFLEHEG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VT+V N+TD++DKI + AR + ++ T +V DT L P H
Sbjct: 61 YD--VTFVANVTDVNDKIYDAARAAGVESE------QLAAEMTAAYVADTDALGLGRPDH 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+P A I +++ LI +I GHAY ++ FD S P YG S R +D+ G +
Sbjct: 113 EPLARETIDEIVALIAVLIERGHAYAVEGDVYFDVRSYPAYGELSHRDVDQMDQGEGISG 172
Query: 182 KYHKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++P DF LWK E W++PWGRGRPGWHIECSAM+ LG FD+HGGG DL
Sbjct: 173 ASLKRDPLDFALWKAWKDGEDTSWDAPWGRGRPGWHIECSAMAETLLGVGFDVHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHENE AQ+C A A +W+HNG + LEG KM+KS GN ++E L
Sbjct: 233 VFPHHENEAAQTCAARGA-PLARLWMHNGMVRLEGEKMAKSVGNIFLLHEALAAHGR--- 288
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------STSKGIIDPA 350
+ HYR+PI ++ +RL EA + + + + A
Sbjct: 289 ----DALVAYFCGGHYRQPIAYSDERLAEAARSVERIREAGRRLVTGSASPDDLSGLREA 344
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLL-----PIFNASAHILGIE--VCKEHLNK 403
+AL +D NT A+ A+ RE+ + + ++ ++ +
Sbjct: 345 FFAALADDFNTPRAMAAVFDWVREANRRAEAGSPVGDADLREMLQVVALDNLLDATDGAD 404
Query: 404 NISIAIEKLV-------------QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
A ++L+ D +R +L + G+ + D
Sbjct: 405 APDAAAQELLARREAARAARDFAAA-------------DTLRDELAALGWTVRDGAAGPE 451
Query: 451 GQR 453
R
Sbjct: 452 LIR 454
>gi|227876791|ref|ZP_03994900.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
gi|227842688|gb|EEJ52888.1| cysteine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
Length = 538
Score = 262 bits (669), Expect = 1e-67, Method: Composition-based stats.
Identities = 143/342 (41%), Positives = 200/342 (58%), Gaps = 26/342 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ + EF+ ++ + +Y+CGPTV H+G+ R + FDVL R LR E
Sbjct: 1 MKLYDSATHAVREFKPLNTGKVGLYLCGPTVQGAPHLGHLRAALDFDVLVRWLRRSGLE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYVRN+TDIDDKI++++R+ + + ++F L + P P
Sbjct: 60 -VTYVRNVTDIDDKILKKSRELGL------PWWALAAHFEREFDWAYRALNTVPPDVTPH 112
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKI-----DEQKMGTR 178
AT HIPQ I L+Q ++ GHAY + + F S+P+YGS + +++ E
Sbjct: 113 ATGHIPQQIALVQRLLDRGHAYADTAGNVYFAVKSLPDYGSLTNQRVADLATTEDAAQID 172
Query: 179 VPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK + P EP W++PWGRGRPGWH+ECSAMS YLG FDIHG
Sbjct: 173 AATESGKRDPRDFALWKAAKPEEPADAAWDAPWGRGRPGWHLECSAMSQAYLGDTFDIHG 232
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GGLDL FPHHENE AQS A A +W+HN +L L+G KMSKS GN + + LL
Sbjct: 233 GGLDLRFPHHENEQAQSHGAGWG--FARLWMHNAWLTLKGEKMSKSVGNVVGVRRLLG-- 288
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
WPAPV+RLA++ THYR ++F+ L +A L K+
Sbjct: 289 -----KWPAPVVRLAVIATHYRTNLEFSEDTLVQAAGLWDKF 325
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 23/133 (17%), Positives = 46/133 (34%), Gaps = 29/133 (21%)
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLAR---------ESTKNHDLLPIFNASAHILGIEVC 397
+ ++AL +DLN A+ ALH+ + + A +LG++
Sbjct: 397 LPEDFVAALDDDLNVPGALPALHRAVKTGHSALASGDIAAAAAQALQLRAMLDVLGLDPA 456
Query: 398 KEHLNKNISIA--------------------IEKLVQERLILLKMKKFSSADYIRKQLES 437
+ S A + L+++R + + ++ AD +R LE+
Sbjct: 457 DSAWGASDSGASAGAGSKNRKDPSADCLKSLVAALLEQRGAAKQSRDWARADALRDLLEA 516
Query: 438 KGFILEDYKNPDN 450
G + D
Sbjct: 517 SGLQITDTPTGAT 529
>gi|168998632|ref|YP_001687900.1| hypothetical protein pK2044_00350 [Klebsiella pneumoniae
NTUH-K2044]
Length = 328
Score = 261 bits (668), Expect = 1e-67, Method: Composition-based stats.
Identities = 142/344 (41%), Positives = 197/344 (57%), Gaps = 25/344 (7%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG TVYD H+G+AR + FD++ R LR+ + VT+VRNITDIDDKII+RAR
Sbjct: 1 MYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD--VTFVRNITDIDDKIIQRARDTG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ +T + + D +L L P +PR T HIPQ+I +I+ ++ AY
Sbjct: 59 ------EDWRSLTERMVHEMHIDFAKLGILPPDIEPRPTEHIPQIISMIERLLHRQFAYI 112
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N +++F T+S +YG S + I + GTR+ +K++P DF+LWKR+ P EP W S
Sbjct: 113 AENGDVMFSTASAKDYGKLSGQDITMLRAGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPS 172
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG GRPGWHIECSAM+ HYLG FDIHGGG DLIFPHHENEIAQS A+ N W+
Sbjct: 173 PWGEGRPGWHIECSAMNCHYLGTHFDIHGGGSDLIFPHHENEIAQSTSAND-GPYVNYWL 231
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G + + KMSKS NF T+ ++L + A +R +L HYR+P++++ +
Sbjct: 232 HTGMVTVNKEKMSKSLNNFFTLRDILHR-------FDAQSVRFFLLGAHYRKPLNYSEEN 284
Query: 327 LTEAEILLSKWPQTSTSK--------GIIDPAVLSALYNDLNTV 362
+ A L++ A+ +D NT
Sbjct: 285 IHIARASLTRLYTACQFADGSRSEQHDAWRARFCEAMDDDFNTP 328
>gi|312381823|gb|EFR27474.1| hypothetical protein AND_05800 [Anopheles darlingi]
Length = 1017
Score = 261 bits (666), Expect = 2e-67, Method: Composition-based stats.
Identities = 151/526 (28%), Positives = 227/526 (43%), Gaps = 96/526 (18%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
+ ++++Y+ ++ +I+P + Y CGPTVYD AHIG+A + D+L R+L+
Sbjct: 503 LTTELRLYDGKTKEKVPL-SINPQKPFLSFYTCGPTVYDSAHIGHASCYVRLDILQRILK 561
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+++ VT NITDIDDKII RA + + K +F D T L
Sbjct: 562 HHFQLPLVT-AMNITDIDDKIIARANERGMD------WQALARKYEAEFWNDLTNLNVQP 614
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
P + R T HIP ++ +Q +I G+AY + + F+TS YG + +
Sbjct: 615 PDVKLRVTEHIPAIVRFVQTLIDKGYAYRADDGSVYFETSKYERYGKLQKVIL------E 668
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-----WGRGRPGWHIECSAMSSHYLGKVFD 232
E K++P+DF LWK S P EP W GRPGWHIECS M+SH GK D
Sbjct: 669 PAQESRFKRHPSDFALWKASKPGEPAWSGEGEAVSVTSGRPGWHIECSTMASHVFGKRLD 728
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINE 290
H GGLDL FPHHENE QSCC + WIH G L+L + KMSKS N I+I+E
Sbjct: 729 FHAGGLDLRFPHHENEETQSCCYHDVPDWVTHWIHTGQLHLEGQTHKMSKSLKNTISISE 788
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-------- 342
LL + A R+ L++HYR I++ + + A +L K+
Sbjct: 789 LL-------QEHTADEFRMLCLLSHYRSVIEYGSESMATASNVLRKFISFFQDSKAYVDG 841
Query: 343 -----------------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
V + L ND NT +++ AL L + K +
Sbjct: 842 LKPQTYGNGSSEENLFDCLAKTRNIVEACLTNDFNTANSVLALSDLISTAQKAINGNEQL 901
Query: 386 -----------NASAHIL-------------GIEVCK-------------EHLNKNISIA 408
+ +L G++ + ++ +
Sbjct: 902 GDGAHPRLIGASNIGAVLAVTRYVREQLLSYGLQSFERSTHRQINGAIQLPIVDSVVEAI 961
Query: 409 IEKLVQERLILLKMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
++ + RL L+ K F D +R L++ G L+D+ +
Sbjct: 962 VKTRAEIRLRALETKDKQLFLVCDQLRNSLKTAGIELKDHGKTSSW 1007
>gi|82541403|ref|XP_724944.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
gi|23479772|gb|EAA16509.1| cysteinyl-tRNA synthetase [Plasmodium yoelii yoelii]
Length = 579
Score = 260 bits (665), Expect = 3e-67, Method: Composition-based stats.
Identities = 148/541 (27%), Positives = 227/541 (41%), Gaps = 111/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y +
Sbjct: 22 NLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILT-NYFK 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDKII+R+ +E + + K +F +D L L P+
Sbjct: 81 YDVFMVINITDIDDKIIKRSEEEKV------NFTELARKWEYEFWEDMKSLNVLLPSSIT 134
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
R + ++ ++I I+ II + +AY + + FD + + +++ +
Sbjct: 135 RVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKIL 194
Query: 181 --------EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+KKN DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGNVLD 254
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 255 IHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKSML 314
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTSTSK 344
+ + A IR+ L+ + ++++ +
Sbjct: 315 -------KKYTANQIRILFLLNKWDSFMNYSPNGEGMTQCIEIDKFFTNFFALINMKIKN 367
Query: 345 GIIDPAVLSALYND---------------------LNTVSAIQALHKLARESTKN----- 378
++ L D NT A+ A+ KL E
Sbjct: 368 FDLNNCDLYWNDTDNKLNNIFRQTKTNIHNFFLDNFNTPEALVAIQKLITEINIYLQNGK 427
Query: 379 ------HDLLPIFNASAHILGIEVCKEHLNKNISIA------------IEKLVQERLIL- 419
+L N LG+ + K+ + I ++Q+ L
Sbjct: 428 IQIGLLLELKQYINFIMTTLGLFYDEAQKTKSNNFDNLLHVLGSYRSNIRAILQKNAKLI 487
Query: 420 LK-MKK-------------------F------------SSADYIRKQ-LESKGFILEDYK 446
K K F D +R Q L + G +++D
Sbjct: 488 RKISKDIKTDTSDTATLDNNNKYNEFIKGIKTNNEELLKECDILRDQHLLNMGILIDDRP 547
Query: 447 N 447
N
Sbjct: 548 N 548
>gi|146162816|ref|XP_001010154.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila]
gi|146146260|gb|EAR89909.2| cysteinyl-tRNA synthetase family protein [Tetrahymena thermophila
SB210]
Length = 716
Score = 260 bits (664), Expect = 3e-67, Method: Composition-based stats.
Identities = 147/565 (26%), Positives = 221/565 (39%), Gaps = 129/565 (22%)
Query: 5 IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+ NTL + + EF +R Y CGPTVYD +HIG+AR I D++ R++ Y
Sbjct: 71 LKVKNTLNPQNLVEFVPHKGKQVRFYNCGPTVYDSSHIGHARTYISADIIKRIM-VKYFG 129
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V + NITDIDDKII+++ + + + K + +D L P
Sbjct: 130 YDVFHCMNITDIDDKIIKKSNESG------EEFTAFARKWEMDYWQDMETLNVDKPDVIV 183
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + ++P++I I+ II +G+AY AN + F+ + K++ Q +
Sbjct: 184 RVSEYVPEIISYIEKIIENGYAYVANGSVYFNVDKFHESPTHCYSKLEPQSVNDAQKLDE 243
Query: 184 -----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++P DF LWK S P EP W+SPWG+GRPGWHIECS M+S LG D
Sbjct: 244 GEGALGKKDEKEKRSPRDFALWKASKPGEPFWDSPWGQGRPGWHIECSTMASEILGYPVD 303
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEK----TANIWIHNGFLNLEGRKMSKSNGNFITI 288
IH GG DL FPHH+NE+AQS + N ++H G L+++G KMSKS NFITI
Sbjct: 304 IHMGGEDLKFPHHDNELAQSEAFYNKQDCQNQWVNYFMHTGHLHIDGLKMSKSLKNFITI 363
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII- 347
L V+RL + Y +D+T + EA+ K+ + + I
Sbjct: 364 KHL-------SSQHSQRVLRLLFMKQTYDSTMDYTTDSIHEAKTKDKKYSEFYLTMNAIL 416
Query: 348 -------------------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+ A + N A++ L ++
Sbjct: 417 LQSEINVPQKWGPREFELRDLFVEKQDNIHRAFQKNFNVPEALKELDEIITAVNTYIKEK 476
Query: 383 PIF-----------NASAHILGIEVCKEHLNKNISIAIEK--LV-QERLILL-KMKK--- 424
PI + LG+ K+ I L+ R + K
Sbjct: 477 PIIHLLIRSIFNYVKHIFNCLGLIYEKQQAQAKDDTFIRTVGLISSLRDEIRGANKDLQV 536
Query: 425 --------------------------------------------------FSSADYIRKQ 434
+ ++D IR +
Sbjct: 537 INKAAINAKSSLGEITLKLEPNASESAVQIATDYITQVLKCVEDNQLQQIYKASDEIRDE 596
Query: 435 -LESKGFILEDYKNPDNGQRMTRWK 458
L G ++D K + WK
Sbjct: 597 KLIQIGIRIDDGKPGEPSL----WK 617
>gi|241856247|ref|XP_002416056.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215510270|gb|EEC19723.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
Length = 547
Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats.
Identities = 141/513 (27%), Positives = 213/513 (41%), Gaps = 84/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I++Y+ + R + + Y CGPTVYD +H+G+A + D++ R+L + +
Sbjct: 42 IRVYDPIGRAKVPLKLQHERVAKWYSCGPTVYDSSHVGHAYTYLRTDIIRRIL-GRFFDV 100
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V ITDIDDKII RA Q + + + + ++F +D +L L PT R
Sbjct: 101 DVVMVMGITDIDDKIIARAVQ------LGETPETLARRYEREFREDIAKLGVLPPTLYAR 154
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ ++P ++ + + GHAY A + + FD S P+YG F + V
Sbjct: 155 VSEYVPSVVRFCEVLRDKGHAYAAADGSLYFDVSQRPDYGLFRAPGMGSSIPVVGVKRDP 214
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
DF LWK + P EP W SPWG GRPGWHIECSAM+S LG DIH GG DL FP
Sbjct: 215 R-----DFALWKGAKPGEPQWTSPWGPGRPGWHIECSAMASELLGDSVDIHTGGRDLAFP 269
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNL-----EGRKMSKSNGNFITINELLETKKFG 298
HHENE AQS + W+H G + + + KMSKS GN + + +LE
Sbjct: 270 HHENEEAQSRSRHGKSRWVRHWLHMGQVMVAKGGTDAVKMSKSAGNTLPLQTVLEDH--- 326
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------- 345
A +RL L +HY + + L +A++ L+ + G
Sbjct: 327 ----SAETLRLLCLRSHYSADVVVGPEALHQAQVNLNMLRDFCANAGSYVRGELPARELN 382
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---------------L 381
+ + A+ +DL+ A + +LA +
Sbjct: 383 EPELLGQLAYLKIQLREAMADDLDYSQATARVLELASRLNGRLQGPCAQTSAAGACRGAI 442
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIE---KLV---------QERLILLKMKK----- 424
+ G + ++ A E LV R L K
Sbjct: 443 AAALVLVSRFFGDVGVELATRDTLASASETSTALVVDSVVAFRSAVRQHALAHKDSSRPL 502
Query: 425 FSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
+ D +R QL +G ++D G + + W
Sbjct: 503 LEACDSLRDQLALEGVQIKDR-----GSQSSTW 530
>gi|145499052|ref|XP_001435512.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124402645|emb|CAK68115.1| unnamed protein product [Paramecium tetraurelia]
Length = 679
Score = 260 bits (664), Expect = 4e-67, Method: Composition-based stats.
Identities = 144/551 (26%), Positives = 235/551 (42%), Gaps = 115/551 (20%)
Query: 5 IKIYNTLER-KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+ N+L+ ++ F I+ + Y CGPTVY +H+G+AR + DV+ R LR Y
Sbjct: 37 LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRD-YFN 95
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ V NITDIDDKII A+ T + F L P
Sbjct: 96 YDLLSVMNITDIDDKIINGAKLAKQD------FLEFTRVWEKDFFSAMEALNIELPDVIT 149
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNY--------GSFSRRKIDEQKM 175
R ++++P+++ I+ II +G+AY++N + FD + + E +
Sbjct: 150 RVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDVQKYLADGHTYPKMRPEMNVDLLQEGEG 209
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
++V ++ K++P DF LWK S P EP W SPWG GRPGWHIECS M+S LG D+H
Sbjct: 210 ESQVNKQQEKRSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMASAILGNPIDLHA 269
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DLIFPHH+N +AQ+ ++ N +IH G LN+ RKMSKS NF+TI+E+L
Sbjct: 270 GGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLKNFLTIDEVL--- 326
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+ + +RL + Y ++++ +++ +A + + + I
Sbjct: 327 ----KRYTPRQVRLNFAIHQYDAVMNYSEEQVEQAISKDKAYQEFFQNTKIYLRESQVTG 382
Query: 348 ------------------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------- 378
V +AL + + + I+A+ KL +
Sbjct: 383 PQKWTQNDFQISNSLRNTKQIVHAALLKNFDFPTVIEAIDKLINQVNAQIAGKTVRAPLV 442
Query: 379 HDLLPIFNASAHILGIEVC----------------------------------------- 397
++ + +LG+
Sbjct: 443 QSVVQYVHFILGLLGLNYLTLNNNSIDIKSIMAEVCSIRDQVKLAARKGEFEAISNIVTQ 502
Query: 398 -----KEHLNKNISIAIEKLVQERLILLKMKK----FSSADYIRKQ-LESKGFILEDYKN 447
+++L+ I I + Q+ L + K F D +R + L G +ED K+
Sbjct: 503 KHFQYEKNLSNLIVDNINQFQQQVLAASQEKNKQQLFQLCDKLRDEQLFELGIQIED-KD 561
Query: 448 PDNGQRMTRWK 458
D + + WK
Sbjct: 562 KD---QPSIWK 569
>gi|258597035|ref|XP_001347434.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
gi|254922413|gb|AAN35347.2| cysteinyl-tRNA synthetase, putative [Plasmodium falciparum 3D7]
Length = 677
Score = 259 bits (662), Expect = 6e-67, Method: Composition-based stats.
Identities = 146/544 (26%), Positives = 221/544 (40%), Gaps = 114/544 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y +
Sbjct: 106 NLFVNNSLTHSKVEFIPQEGNKIKWYACGPTVYDAAHLGHARTYVSFDIIRRIL-VNYFK 164
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDKII+R+ +E + + K +F +D L L PT
Sbjct: 165 YDVFMVINITDIDDKIIKRSVEEKIG------FTELARKWEYEFWEDMKSLNVLLPTAIT 218
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGT 177
R + ++ ++ I+ II + +AY + FD S Y + ++
Sbjct: 219 RVSEYVGDIVKYIEKIIENKYAYVSEEGSVYFDIDEFKKSEKHFYARMEPLSVKDENKIL 278
Query: 178 RVPEK-----YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
KKN DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LG V D
Sbjct: 279 EGEGDLGVISKKKKNAYDFALWKSSKPNEPHWDSPWGKGRPGWHIECSTMASNILGDVLD 338
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 339 IHSGGIDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML 398
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS----------------- 335
+ + IR+ L+ + ++++ + + +
Sbjct: 399 T-------KYTSNQIRILFLLNKWDNFMNYSPNGESMVQCIEIDKSFTNFFAIILMKIKN 451
Query: 336 --------KWPQTSTSKGII----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
W ++ + ++ NT A+ A+ KL E D
Sbjct: 452 FDLNSCNLYWSDADNKLNLLFRQTKNKIHEHFLDNFNTPDALLAIQKLITEINIYMDKEK 511
Query: 384 I-----------FNASAHILGIEVCKEHLNKNI--SIAIEKL--------VQERLILL-- 420
I N G+ K ++ L + +
Sbjct: 512 IQIGLLLEIKHYINFIFDTFGLIYGDAPKGKYDKFDELLQTLGTYRRNIRINLQSNAKLI 571
Query: 421 ----KMKK--------------------F------------SSADYIRKQ-LESKGFILE 443
K K F D +R Q L + G +++
Sbjct: 572 RNILKEKNKKNDLDPVAAQEKSELLHSEFINNIKANNELLLKECDLLRDQHLLNMGILID 631
Query: 444 DYKN 447
D N
Sbjct: 632 DRPN 635
>gi|300813895|ref|ZP_07094199.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
str. F0141]
gi|300511958|gb|EFK39154.1| putative cysteine--tRNA ligase [Peptoniphilus sp. oral taxon 836
str. F0141]
Length = 276
Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats.
Identities = 130/283 (45%), Positives = 168/283 (59%), Gaps = 10/283 (3%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L K EF I+ + MY CGPTVY++ H+GNARP++VFD L R Y +
Sbjct: 1 MKLFNSLTGKKEEFYPINSGKVTMYNCGPTVYNYIHVGNARPIVVFDTLRRYFLYKGLD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP-THQP 123
V +V N TDIDDKII RA +E N I K ++F KD + L T P
Sbjct: 60 -VKFVLNFTDIDDKIINRANEE------NKTTEQIAEKYIEEFKKDASALGLYDYQTINP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT+ + QMI IQ +I G AY ++ ++ FD + YG S +KI++ + G+RV
Sbjct: 113 RATHVVDQMISFIQTLIDKGAAYVSSGDVYFDVNYDKEYGKLSGKKIEDLRAGSRVDVSD 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+NP DF LWK EP W++PWG GRPGWHIECS M+ LG DIH GG DL FP
Sbjct: 173 LKRNPYDFALWKNKKENEPYWKAPWGEGRPGWHIECSVMAKTLLGDTIDIHTGGEDLKFP 232
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
HHENEIAQS + A W+HNG + + KMSKS GNF
Sbjct: 233 HHENEIAQSETCNDA-PFARFWLHNGMITVNNEKMSKSKGNFF 274
>gi|298527059|ref|ZP_07014468.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
gi|298496853|gb|EFI32147.1| cysteinyl-tRNA synthetase 1 [Mycobacterium tuberculosis 94_M4241A]
Length = 384
Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats.
Identities = 126/334 (37%), Positives = 184/334 (55%), Gaps = 19/334 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++++T + +F + P ++ +Y+CG TV HIG+ R + FD+L R L +
Sbjct: 6 RLRLHDTAAGVVRDFVPLRPGHVSIYLCGATVQGLPHIGHVRSGVAFDILRRWLLARGYD 65
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++RN+TDI+DKI+ +A + + + F L L P+ +P
Sbjct: 66 --VAFIRNVTDIEDKILAKAAAAG------RPWWEWAATHERAFTAAYDALDVLPPSAEP 117
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
RAT HI QMI +I+ +I GHAY ++ FD S P YG S KID+ G V
Sbjct: 118 RATGHITQMIEMIERLIQAGHAYTGGGDVYFDVLSYPEYGQLSGHKIDDVHQGEGVAAG- 176
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++ DF LWK P EP W +PWGRGRPGWH+ECSAM+ YLG FDIH GG+DL+FP
Sbjct: 177 -KRDQRDFTLWKGEKPGEPSWPTPWGRGRPGWHLECSAMARSYLGPEFDIHCGGMDLVFP 235
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQS A A W+HNG++ + G KMSKS GN +++ +L+ +
Sbjct: 236 HHENEIAQSRAAGDG--FARYWLHNGWVTMGGEKMSKSLGNVLSMPAMLQRVR------- 286
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
+R + HYR ++F+ + +A
Sbjct: 287 PAELRYYLGSAHYRSMLEFSETAMQDAVKAYVAL 320
>gi|149635956|ref|XP_001514971.1| PREDICTED: hypothetical protein [Ornithorhynchus anatinus]
Length = 522
Score = 259 bits (661), Expect = 8e-67, Method: Composition-based stats.
Identities = 143/503 (28%), Positives = 217/503 (43%), Gaps = 96/503 (19%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y CGPTVYD AH+G+A + FD++ R+L +G VT V ITDIDDKII+RA +
Sbjct: 22 YSCGPTVYDHAHLGHACSYVRFDIIRRILTKIFGINLVT-VMGITDIDDKIIKRANE--- 77
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-E 147
+N + + + F +D L L PT R T +IPQ+I I+ II +GHAY
Sbjct: 78 ---LNISPIALARLYEEDFKEDMAALKVLPPTVYMRVTENIPQIISFIERIIANGHAYST 134
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ FD + + + + P K++P+DF LWK + P E W SP
Sbjct: 135 NQGNVYFDLKARGDKYGTLVGMTSDPR---EEPADSDKRHPSDFALWKAAKPQEIFWTSP 191
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG GRPGWHIECS +SS G DIH GG+DL FPHHENEIAQ + + N ++H
Sbjct: 192 WGNGRPGWHIECSTISSLIFGSQLDIHSGGIDLAFPHHENEIAQCEVYHQCSQWGNYFLH 251
Query: 268 NGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+G L++ + KMSKS N+ITI + L + + RL + YR I+++
Sbjct: 252 SGHLHVKGKEEKMSKSLKNYITIKDFL-------KKFSPDEFRLFCMRGSYRSAIEYSED 304
Query: 326 RLTEAEIL----------------------LSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ EA+ L + + +AL +D +T
Sbjct: 305 SMQEAKHLLLGMSSFISDARDYMRGQLLCNPIREDILWERLASTKVNIKAALADDFDTRR 364
Query: 364 AIQALHKLARESTK-----------------NHDLLPIFNASAHILGIEVC------KEH 400
A+ A+ L R ++ GI + ++
Sbjct: 365 AVDAIMDLIRHGNSQLTAVTKETGSPRSPAVYGSIVSFIQEFCDTFGISLAGGQFVSEQR 424
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLES 437
+ + +++LVQ RL + ++ A D +R+ L
Sbjct: 425 NSATLQRVVDELVQFRLQVRT---YALALPEAPPERRRQLLRERTPLLQACDALRRDLAL 481
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G ++D N + W+ +
Sbjct: 482 CGINIKDRSNTTS-----TWEMQ 499
>gi|237844837|ref|XP_002371716.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
gi|211969380|gb|EEB04576.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii ME49]
Length = 766
Score = 259 bits (661), Expect = 9e-67, Method: Composition-based stats.
Identities = 141/558 (25%), Positives = 220/558 (39%), Gaps = 131/558 (23%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ EF + + Y CGPTVYD +H+G+AR + FDV+ R++ Y VT
Sbjct: 113 NSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YLNYDVTM 171
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
NITDIDDKII+R+ ++ + ++F D T L PT R + +
Sbjct: 172 CMNITDIDDKIIKRSTEQGVD------FLTLARHWEKEFFNDMTALNVRLPTVVTRVSEY 225
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-------- 180
IP+++ LI+ I+ +G+ YE+ + FDT + +++ +
Sbjct: 226 IPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVLEGEGEL 285
Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK++ EP W+SPWG+GRPGWHIECSAM+ L DIH GG+
Sbjct: 286 GLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLDIHSGGI 345
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH+NE+AQS A+ + N ++H+G L++ G KMSKS NFITI E L
Sbjct: 346 DLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECLSR---- 401
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS-------------KWPQTSTSKG 345
+ A IRL LM + ++++ T + + K +
Sbjct: 402 ---FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDNFFALVKAKLRDATPVSD 458
Query: 346 IIDPAV-----------------------LSALYNDLNTVSAIQALHKLARESTKN---- 378
A+ ++ NT A+ AL L +
Sbjct: 459 YAQKWTSDDFALNETLRATKEQASASAGVHKAILDNFNTPEALVALQHLMSAANSYLNQK 518
Query: 379 ----------HDLLPIFNASAHILGIEVCKE--------HLNKNISIAIEKLVQ----ER 416
++ I G+ E + + ++ LVQ R
Sbjct: 519 TGEDVKAPLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQCLGAFR 578
Query: 417 LILLK---------MKKFSS-----------------------------------ADYIR 432
I+ + D +R
Sbjct: 579 EIVRTSASHGMRVVNQDLKRVAASPVGSEVSPSDEEGKGDLLASLSETMRSLLQACDDVR 638
Query: 433 K-QLESKGFILEDYKNPD 449
+L G +L+D +
Sbjct: 639 DKKLPELGILLQDRPDGT 656
>gi|221481003|gb|EEE19417.1| cysteinyl-tRNA synthetase, putative [Toxoplasma gondii GT1]
Length = 684
Score = 258 bits (659), Expect = 1e-66, Method: Composition-based stats.
Identities = 142/552 (25%), Positives = 222/552 (40%), Gaps = 125/552 (22%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ EF + + Y CGPTVYD +H+G+AR + FDV+ R++ Y VT
Sbjct: 37 NSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YLNYDVTM 95
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
NITDIDDKII+R+ ++ + ++F D T L PT R + +
Sbjct: 96 CMNITDIDDKIIKRSTEQGVD------FLTLARHWEKEFFNDMTALNVRLPTVVTRVSEY 149
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-------- 180
IP+++ LI+ I+ +G+ YE+ + FDT + +++ +
Sbjct: 150 IPEVVALIERIVKNGYGYESQGSVYFDTQTFRKNEKHVYGRMEPTSVSDEARVLEGEGEL 209
Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK++ EP W+SPWG+GRPGWHIECSAM+ L DIH GG+
Sbjct: 210 GLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLDIHSGGI 269
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH+NE+AQS A+ + N ++H+G L++ G KMSKS NFITI E L
Sbjct: 270 DLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECLSR---- 325
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL------------------------ 334
+ A IRL LM + ++++ T + +
Sbjct: 326 ---FTARQIRLLCLMNRWDSFMNYSPDGETMQQAVDVDRAFDYFFALVKAKLRDATPVSD 382
Query: 335 --SKWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------- 378
KW + V A+ ++ +T A+ AL L +
Sbjct: 383 YAQKWTSDDFALNETLRATKEQVHKAILDNFSTPEALVALQHLMSAANTYLNQKTGEDVK 442
Query: 379 ----HDLLPIFNASAHILGIEVCKE--------HLNKNISIAIEKLVQ----ERLILLK- 421
++ I G+ E + + ++ LVQ R I+
Sbjct: 443 APLVKEVAKYIFHMLKIFGVVEDDEDNMAYVKSKGSSAAAEEVDGLVQCLGAFREIVRTS 502
Query: 422 --------MKKFSS-----------------------------------ADYIRK-QLES 437
+ D +R +L
Sbjct: 503 ASHGMRVVNQDLKRVAASPVGSEVSPSEEEGKGDLLASLSETMRSLLQACDDVRDKKLPE 562
Query: 438 KGFILEDYKNPD 449
G +L+D +
Sbjct: 563 LGILLQDRPDGT 574
>gi|85709165|ref|ZP_01040231.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
gi|85690699|gb|EAQ30702.1| cysteinyl-tRNA synthetase [Erythrobacter sp. NAP1]
Length = 486
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 134/509 (26%), Positives = 207/509 (40%), Gaps = 89/509 (17%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R+I EF I R+Y CGPTVY++ HIGN R + D L R L+
Sbjct: 10 LRLFNSLNRQIEEFVPIHEGEARVYTCGPTVYNYQHIGNMRAYVFADTLGRTLQLKG--L 67
Query: 65 CVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
+T+V NITD+ +DK+ + A + S I + F +D RL
Sbjct: 68 KLTHVINITDVGHLTSDADEGEDKMEKMAASQGKSA------WDIARFYQEDFERDLARL 121
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK 174
H PRAT ++ +MI + + H YE + + FD S++ +YG +R +E +
Sbjct: 122 NVQKKQH-PRATQYVEEMIAWGKRVADK-HCYELESGLYFDVSTVADYGKLARAVTEEGE 179
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
R+ K+N ADF +W+++ E W+SPWG+G PGWH+ECS M LG F
Sbjct: 180 --GRIERLEGKRNAADFAIWRKTPEGETRQMEWDSPWGKGAPGWHLECSVMGEALLGFPF 237
Query: 232 DIHGGGLDLIFPHHENEIAQ---SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG+D HH NEIAQ CC+ + N + +S +
Sbjct: 238 DIHTGGIDHREIHHPNEIAQNQAYCCSGGLSDATN--SGARIWMHNNFLVERSGKMSKSS 295
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
E L + + + R+ L HYR ++F+ + L A L +
Sbjct: 296 GEFLRLQLLVDKGFHPHAYRMMCLQAHYRSELEFSWEGLEAALTRLKRMIMAVERLADAP 355
Query: 349 PAVL--------------SALYNDLNTVSAIQALHK-LARESTKNHDLLPIFNASAHILG 393
+ A+ +DLNT A+ AL LA + + +LG
Sbjct: 356 SQPVAEHPKFAAPLAKFEEAMSDDLNTAIALTALEDALATKKVDAGIKRAVVEHMDAVLG 415
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILL------------------------KMKKFSSAD 429
+++ R L K F+++D
Sbjct: 416 LDLFSLS---------------RADLRIRPASAEIAEEEIEDALARRKAARAEKDFATSD 460
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWK 458
IR +L +KG + D WK
Sbjct: 461 AIRDELAAKGVEVMDGD-----PLGWDWK 484
>gi|68072763|ref|XP_678295.1| cysteine--tRNA ligase [Plasmodium berghei strain ANKA]
gi|56498716|emb|CAH94957.1| cysteine--tRNA ligase, putative [Plasmodium berghei]
Length = 582
Score = 258 bits (658), Expect = 2e-66, Method: Composition-based stats.
Identities = 147/541 (27%), Positives = 228/541 (42%), Gaps = 111/541 (20%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y +
Sbjct: 22 NLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILT-NYFK 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDKII+R+ +E + + K +F +D L L P+
Sbjct: 81 YDVFMVINITDIDDKIIKRSEEEKV------NFTELARKWEYEFWEDMKSLNVLLPSSIT 134
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
R + ++ ++I I+ II + +AY + + FD + + +++ +
Sbjct: 135 RVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKIL 194
Query: 181 --------EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+KKN DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITI +L
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITIKNML 314
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL--------TEAEILLSKWPQTSTSK 344
+ + + IR+ L+ + ++++ +
Sbjct: 315 -------KKYTSNQIRILFLLNKWDSFMNYSPNGEGMTQCIEIDKFFTNFFALINMKIKN 367
Query: 345 GIIDPAVLSALYND---------------------LNTVSAIQALHKLARESTKN----- 378
++ L D NT A+ ++ KL E
Sbjct: 368 FDLNNCDLYWNDTDNKLNNIFRQTKTNIHNFFLDNFNTPEALVSIQKLITEINIYLQNGK 427
Query: 379 ------HDLLPIFNASAHILGIEVCKEHLNKNISIA------------IEKLVQERLIL- 419
+L N G+ + K+ + I ++Q+ L
Sbjct: 428 IQIGLLLELKQYINFIMTTFGLFYDEPQKTKSNNFDNLLHVLGSYRSNIRTILQKNAKLI 487
Query: 420 LK-----------------MKKF---------------SSADYIRKQ-LESKGFILEDYK 446
K KKF D +R Q L + G +++D
Sbjct: 488 RKVSKEIKTDASDTASLDNDKKFNEFIKDIKTNNENLLKECDILRDQHLLNMGILIDDRP 547
Query: 447 N 447
N
Sbjct: 548 N 548
>gi|307204345|gb|EFN83100.1| Cysteinyl-tRNA synthetase, mitochondrial [Harpegnathos saltator]
Length = 511
Score = 257 bits (657), Expect = 3e-66, Method: Composition-based stats.
Identities = 148/502 (29%), Positives = 231/502 (46%), Gaps = 76/502 (15%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN + R + ++ Y+CGPTVYD AHIG+A I D++ R+L + V
Sbjct: 36 VYNPVTRCKVPLILKTKNVLKWYMCGPTVYDSAHIGHATTYIKSDIIRRILTDH-FNIDV 94
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V ITDIDDKII+ A + + + +F++D RL P R T
Sbjct: 95 LLVMGITDIDDKIIKCALESKQD------FKALARRFEMEFLEDMNRLNVREPYIYCRVT 148
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+++P++++ ++ +I G+ Y + + FDT+ YG S + + K
Sbjct: 149 DYVPRIVHFVEKLIASGYGYILKDGSVYFDTNKYNRYGKIS--------IPSPDATHPDK 200
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K+ DF LWK EP WESPWGRGRPGWHIECSA++S G D+H GG+DL FPHH
Sbjct: 201 KSTLDFALWKAGKSDEPFWESPWGRGRPGWHIECSAIASAVFGNSIDVHSGGIDLAFPHH 260
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPA 304
ENE AQSCC +++ N W+H G L+L+ KMSKS N ++I + L+ + A
Sbjct: 261 ENEEAQSCCYHGVDQWVNYWLHCGHLHLKGDVKMSKSLRNTVSIRDYLD-------KYSA 313
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST----------SKGIIDPAVL-- 352
+R L++HYR I+F+ + + A + K + G ID +L
Sbjct: 314 NQLRTLCLLSHYRNGIEFSDEVMQNAVSVTKKIENFISDSDTYTAGKLQAGEIDENLLLT 373
Query: 353 -------SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI-------------- 391
SAL +D +T A+ A+ L K SA++
Sbjct: 374 NTRSKVDSALADDFDTSRAMHAILNLVGVGNKMFRQSDASPRSANVYGSHASAVAVVSNY 433
Query: 392 -------LGIEVCKEHLNKNISIAIEKLVQERLILLKM-----KK---FSSADYIRKQLE 436
G ++ + I+ ++ R + K + D +R++L
Sbjct: 434 VSNTLSKFGFSQSASAKDRQVEEIIDHCLRFRAAVRNRALENPKNDALLKACDNVREELS 493
Query: 437 SKGFILEDYKNPDNGQRMTRWK 458
+ G +++D K+ + RWK
Sbjct: 494 TCGILVKDIKDNFSW----RWK 511
>gi|159900776|ref|YP_001547023.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
gi|159893815|gb|ABX06895.1| cysteinyl-tRNA synthetase [Herpetosiphon aurantiacus ATCC 23779]
Length = 396
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 131/407 (32%), Positives = 201/407 (49%), Gaps = 33/407 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +Y+TL + + ID +RMYVCG T YD H+G+AR +V+D + R L +
Sbjct: 1 MLLYDTLCQTPVAMEPID-GFVRMYVCGVTPYDTTHMGHARTYVVYDTIRRYLEWQG--L 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TDIDD I+ ++ Q + + + T++F++D L P H +
Sbjct: 58 PVLYVQNVTDIDDDILRKSAQLGLT------WDELGRQETERFLRDMDALNVRMPNHYVK 111
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
AT+ I ++I + +I G AYE + F+ + P++GS + P
Sbjct: 112 ATDAIAKIIEVNSGLIERGVAYENQGNVYFNVHADPDFGSLAHSDYASMLAIANERGNFP 171
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ HK++P DF+LW+ + P EP W+SPWGRGRPGWHIEC+AM YLG +IHGGG DL
Sbjct: 172 DDPHKRDPLDFVLWQATKPGEPWWDSPWGRGRPGWHIECTAMVLEYLGPQINIHGGGSDL 231
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHH E+AQ+ W H G + EG KMSKS GN + ++ L +
Sbjct: 232 QFPHHACELAQAENFTGQSPHVAAWSHIGMVYYEGEKMSKSLGNLVLASKTL-------Q 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST--------SKGIIDPAVL 352
+ A IRL +L +YR+ +++ + E + ++ Q + +
Sbjct: 285 HYSADAIRLGLLKYYYRDQFEYSNDDVAWGERTVERFKQAVNSGVSGGALHAEELRNEAI 344
Query: 353 SALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHILGI 394
+AL D T + +QAL LA E +LG+
Sbjct: 345 AALDADFQTPACLQALITLAEASINGEIDDAELAATTLRELGAVLGL 391
>gi|222478729|ref|YP_002564966.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222451631|gb|ACM55896.1| cysteinyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 497
Score = 256 bits (654), Expect = 5e-66, Method: Composition-based stats.
Identities = 143/509 (28%), Positives = 214/509 (42%), Gaps = 77/509 (15%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ + +TL + EF ++ +YVCG TV D H+G+AR DVL+R L +
Sbjct: 1 MSLVVTDTLADERVEFT--ADGDVTLYVCGLTVSDDPHLGHARLWFHADVLHRWLDHVGY 58
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N+TD+++KI R + T L L
Sbjct: 59 D--VRHVENVTDVNEKITAR----IGERDAWTDERDVAETFTATTFDAMRGLNLLRAEVY 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T H+P+++ L++ +I G+AYE+N + FD ++ +YG S + + + + E+
Sbjct: 113 PRVTEHVPEIVDLVETLIEKGYAYESNGSVYFDVTAFDDYGKLSNQNVQDLEAQGEPDER 172
Query: 183 YHKKNPADFILWKRS------------------TPMEPGWESPWGRGRPGWHIECSAMSS 224
K+NP+DF LWK TP W SPW GRPGWH+ECSAMS+
Sbjct: 173 SEKRNPSDFALWKADGVSETAAREHAKHDHGDETPSGEIWNSPWSEGRPGWHVECSAMST 232
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+LG DIH GG DL+FPHHENEIAQS A E A W+H G L +EG KMS S GN
Sbjct: 233 THLGDTLDIHMGGRDLVFPHHENEIAQSEAATG-ETFARHWLHVGLLAMEGEKMSSSIGN 291
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
F T+ + L+ VIR YR T + + EAE + +T
Sbjct: 292 FWTVPDALDELGV-------NVIRTFYAGAAYRSEQALTEETIAEAEERWERLSRTYDRA 344
Query: 345 ----------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-- 380
+ +A+ +DLN A AL L ++ D
Sbjct: 345 VEALDSTEARAKAEDEELRGAVETARDDLATAMNDDLNLREATAALLDLTDAVNRHVDDV 404
Query: 381 -----------------LLPIFNASAHILGIEVCKEHLNKNI--SIAIEKLVQERLILLK 421
+ N + +LG++ ++ ++ R +
Sbjct: 405 EDGDTESAYDYRGLREAVEAFENLAGDVLGLQFESTTDGDVDLAGELVDLVLDVREAERE 464
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ AD +R L G +ED +
Sbjct: 465 AGNYERADELRDALREVGVEIEDGPDGAT 493
>gi|158300888|ref|XP_001238361.2| AGAP011821-PA [Anopheles gambiae str. PEST]
gi|157013377|gb|EAU75859.2| AGAP011821-PA [Anopheles gambiae str. PEST]
Length = 525
Score = 255 bits (652), Expect = 8e-66, Method: Composition-based stats.
Identities = 146/521 (28%), Positives = 231/521 (44%), Gaps = 89/521 (17%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
+ +++Y+ ++ Q I PS + Y CGPTVYD AHIG+A + D+L R+LR
Sbjct: 16 LTHDLRLYDGRLKEKVALQ-IHPSKSYLSFYTCGPTVYDSAHIGHASCYVRLDILQRILR 74
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+++ VT NITDIDDKII RA ++ + + +F D RL A
Sbjct: 75 HHFHLPLVT-AMNITDIDDKIIARALEQQVD------WQQLARRYEDEFWSDLQRLNVCA 127
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
P + R T+HIP +I +Q ++ G AY + + F+T+ YG +
Sbjct: 128 PDVKLRVTDHIPAIIRFVQTLVEKGFAYSTADGSVYFETAKYERYGKLQKV----IIEPE 183
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K K++ +DF LWK S P EP W +P + GRPGWHIECS ++SH G+ D H G
Sbjct: 184 SNASKGQKRHQSDFALWKASKPGEPFWTAPGFSHGRPGWHIECSTLASHLFGRTIDFHAG 243
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
GLDL FPHHENE QSCC + W+H G L+L + KMSKS N ++I ELL
Sbjct: 244 GLDLRFPHHENEETQSCCYHDVPDWVTHWLHTGQLHLEGQTHKMSKSLKNTVSIGELLGA 303
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
+ A R+ L++HYR I++ + + A +L K+ + + A
Sbjct: 304 -------YSADEFRMLCLLSHYRSAIEYGPEAMGTARNVLRKFASFFSDAKAYIDGLKPA 356
Query: 355 LYNDLNTVSAIQALHK--------LARESTKNHDLLPIFNASAHI--------------- 391
Y+ +T S + L L + + +L + ++++
Sbjct: 357 AYDATSTESLLGKLSNTRTTVREFLKNDFNTANSVLALGELASNVQRIINSHEPSTSGVS 416
Query: 392 -----------------------LGIEVCKEH-----------LNKNISIAIEKLV---- 413
G++ + N+++ IE +V
Sbjct: 417 LIGSSNVGAVLAVTEYIREELVSYGVQSLDKQSPQHSRQMGNDANQSLEQLIEAMVATRS 476
Query: 414 QERLILLKMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
+ RL ++ K F D +R +L+ ++D+ +
Sbjct: 477 EIRLQAIETKNPQLFKVCDLLRDRLKLANVEVKDHGKTSSW 517
>gi|189234350|ref|XP_973716.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
castaneum]
Length = 501
Score = 255 bits (651), Expect = 1e-65, Method: Composition-based stats.
Identities = 146/495 (29%), Positives = 219/495 (44%), Gaps = 68/495 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++N R + + + Y CGPTVYD +HIG+A + D++ RLLR+ Y
Sbjct: 26 IKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRH-YFNL 84
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V NITDIDDKII RA + K +F KD L P R
Sbjct: 85 NVVTVMNITDIDDKIIARAN------TAKVPPKELAKKFEAEFWKDLDALDVRRPDCVLR 138
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ + I+ +I G AY+A + + FD + NY D +
Sbjct: 139 VTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKLQNIGEDAPE------PSK 192
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
KK+ DF LWK + P E W S WG+GRPGWHIECSA++ H LG DIH GG+DL FP
Sbjct: 193 FKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLGPEIDIHAGGIDLRFP 252
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELLETKKFGGRSW 302
HHENE AQSC + N W+H G L+L+ +KMSKS N I+I+ +LE
Sbjct: 253 HHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISISSMLEDTT------ 306
Query: 303 PAPVIRLAMLMTHYREPIDFTVQ--------------RLTEAEILLSKWPQTSTSKGIID 348
AP R+A LM+HYR ++++ + + + L+ + + +
Sbjct: 307 -APAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYLNGYLKADVDNDTVS 365
Query: 349 PAVLSALY-------NDLNTVSAIQALHKLARESTKNH----------------DLLPIF 385
V+ + +D NT I +++L +
Sbjct: 366 KLVVESANKIHSALIDDFNTSEVISTINELISAVNSILHSSRTDLCDTKSVAVIAASNLV 425
Query: 386 NASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLK----MKK---FSSADYIRKQLE 436
+++ ++ GI V K+ + N + L R + + K D +R L+
Sbjct: 426 SSTLNMFGINVNKKQSSVCDNYVEVMNILNDFRQSIRQLGISNKDKNVLELCDKVRDNLK 485
Query: 437 SKGFILEDYKNPDNG 451
S G ++D+ +
Sbjct: 486 SIGITIKDHGKMSSW 500
>gi|145547719|ref|XP_001459541.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427366|emb|CAK92144.1| unnamed protein product [Paramecium tetraurelia]
Length = 668
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 149/551 (27%), Positives = 231/551 (41%), Gaps = 115/551 (20%)
Query: 5 IKIYNTLER-KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+ N+L+ ++ F I+ + Y CGPTVY +H+G+AR + DV+ R LR Y+
Sbjct: 37 LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARTYLGIDVIRRTLRDYFHY 96
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
++ V NITDIDDKII A T + F L P
Sbjct: 97 DLLS-VMNITDIDDKIITGANAAK------QDFLEFTKVWEKDFFDAMEALNIELPDVIT 149
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG------- 176
R ++++P+++ IQ II +G+AYE+N + F+ G + E
Sbjct: 150 RVSDYVPEIVTFIQKIISNGYAYESNGSVYFEVQKYIADGHTYPKMRPEVNAELLQEGEG 209
Query: 177 -TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
++V ++ KK+P DF LWK S P EP W+SPWG GRPGWHIECS M+S LG D+H
Sbjct: 210 ESQVNKQSEKKSPYDFALWKASKPEEPKWQSPWGEGRPGWHIECSVMASAILGNPIDLHA 269
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL+FPHH+N +AQ+ E+ N +IH G LN+ RKMSKS NF+TI E+L
Sbjct: 270 GGIDLLFPHHDNSLAQAEACFNCEQWINYFIHLGHLNIADRKMSKSLKNFMTIEEVL--- 326
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+ + +RL + Y P +++ +++ +A + + + I
Sbjct: 327 ----KRYTPRQVRLNFAIHQYDAPQNYSEEQMEQAIAKDKSYQEFFQNTKIYLRQSQVTD 382
Query: 348 ------------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----- 384
+ AL N+ + + + A KL + +
Sbjct: 383 AQKWTENDFQLSALFRSTKQIIHQALTNNFDFPTVVDATDKLINQVNIQIAAKNVRAPLI 442
Query: 385 ------FNASAHILGIEVCKEHLNK-NISIAIEKLVQERL----ILL------------- 420
N +LGI N+ +I +E++ R
Sbjct: 443 SSVVNYVNFIFGLLGINYQTLFSNQIDIQPLMEQVCSIRDKVKVAARNNDFESITNAVSQ 502
Query: 421 ----------------------------KMKK----FSSADYIRK-QLESKGFILEDYKN 447
+ K F D +R QL + G +ED K+
Sbjct: 503 KQLEYEKNISNHLVDAINQFQQEVLVASQNKNKQQIFQLCDKLRDQQLFNLGIKIED-KD 561
Query: 448 PDNGQRMTRWK 458
D + + WK
Sbjct: 562 KD---QASVWK 569
>gi|222834518|gb|EEE72995.1| predicted protein [Populus trichocarpa]
Length = 241
Score = 255 bits (650), Expect = 1e-65, Method: Composition-based stats.
Identities = 127/249 (51%), Positives = 155/249 (62%), Gaps = 8/249 (3%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + +YN+L RK + P + MYVCGPTVY+FAHIGNARP +VFDVL RLLR
Sbjct: 1 MTSALSLYNSLTRKKEPLRTGQPGRVTMYVCGPTVYNFAHIGNARPAVVFDVLARLLREQ 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y E V Y RN TD+DDKI A E I IT++ + +D L L P
Sbjct: 61 YAE--VVYARNFTDVDDKINASAAAEGV------PIGTITARYIDAYHEDMRALGVLIPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PR T HIP +I LIQ +I +G+AY + ++F S P YG S R+ ++ G RV
Sbjct: 113 LEPRVTEHIPAIIALIQRLIANGNAYVEQDHVLFHVPSFPAYGQLSGRRPEDMLAGVRVD 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+K++P DF+LWK ST PGW SPWGRGRPGWHIECSAM +LG DIHGGG DL
Sbjct: 173 VAPYKRDPLDFVLWKPSTAEVPGWPSPWGRGRPGWHIECSAMIGQHLGSTIDIHGGGQDL 232
Query: 241 IFPHHENEI 249
IFPHHENEI
Sbjct: 233 IFPHHENEI 241
>gi|320533525|ref|ZP_08034187.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
F0337]
gi|320134258|gb|EFW26544.1| cysteinyl-tRNA synthetase [Actinomyces sp. oral taxon 171 str.
F0337]
Length = 498
Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats.
Identities = 142/416 (34%), Positives = 212/416 (50%), Gaps = 46/416 (11%)
Query: 3 KKIKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++Y++ R I P + +Y+CG TV HIG+ R I FDVL R L
Sbjct: 26 PALRLYDSAARAIVPLAPTATPGLVTIYLCGATVQGSPHIGHMRSGIAFDVLRRWLERSG 85
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V +RN+TDIDDKI+ ++ P +P + ++F L APT+
Sbjct: 86 QE--VRLIRNVTDIDDKILSKSAAAEPPVP----WWAWAQRFEREFDAAYRALGVAAPTY 139
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDE-----QKM 175
+PRAT HIP+MI L+Q ++ GHAY + + +D S+P+YGS + +++++ +
Sbjct: 140 EPRATGHIPEMIDLVQRLLDAGHAYIGESGNVYYDVRSLPDYGSLTNQRLEDLATTEDES 199
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ K++P DF LWK + P EP W +PWGRGRPGWH+ECSAMS YLG+ FD
Sbjct: 200 QLDDDVEADKRDPRDFALWKAAKPTEPADAAWGAPWGRGRPGWHLECSAMSRRYLGETFD 259
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IHGGG+DL FPHHENE AQS A A W+HN ++ ++G KMSKS GN + + ELL
Sbjct: 260 IHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTIKGEKMSKSLGNSLVVAELL 317
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------- 337
+ + A V+RLA+ H+R ++F+ + L +A L +
Sbjct: 318 -------KRYDAAVLRLALGTVHHRSTVEFSDETLADAAALWERLSGAILRAYEFCDDGG 370
Query: 338 ------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
P + +A+ DLN A+ +H + + +
Sbjct: 371 TNPVEAPAEQVRARALPAEFTAAMDEDLNLAGAMAVVHATLKALNVALSRIDTVDK 426
>gi|145492154|ref|XP_001432075.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124399184|emb|CAK64678.1| unnamed protein product [Paramecium tetraurelia]
Length = 672
Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats.
Identities = 142/556 (25%), Positives = 227/556 (40%), Gaps = 121/556 (21%)
Query: 5 IKIYNTLER-KITEFQAIDPSNIRMYVCGPTVYDFAHIGNAR---------PMIVFDVLY 54
+K+ N+L+ ++ F I+ + Y CGPTVY +H+G+AR + DV+
Sbjct: 25 LKLANSLKGSELVPFIPINGRQVNFYYCGPTVYSNSHLGHARQCYCNYVFRTYLGIDVIR 84
Query: 55 RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
R LR Y + V NITDIDDKII A+ N T + F L
Sbjct: 85 RTLRD-YFNYDLLSVMNITDIDDKIINGAK------SANQDFLEFTKVWEKDFFSAMEAL 137
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP---------NYGSF 165
P R ++++P+++ I+ II +G+AY++N + FD
Sbjct: 138 NIELPDVITRVSDYVPEIVTFIEKIIANGYAYDSNGSVYFDYFQFQIKLQHTYPKMRPET 197
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
+ + E + ++ ++ KK+P DF LWK S P EP W SPWG GRPGWHIECS M+S
Sbjct: 198 NADLLQEGEGESQANKQSEKKSPNDFALWKASKPEEPKWPSPWGEGRPGWHIECSVMASA 257
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
LG D+H GG+DLIFPHH+N +AQ+ ++ N +IH G LN+ RKMSKS NF
Sbjct: 258 ILGNPIDLHAGGIDLIFPHHDNSLAQAEACFNCDQWINYFIHLGHLNIADRKMSKSLKNF 317
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+TI+E+L + + IRL + Y ++++ +++ +A + + +
Sbjct: 318 LTIDEVL-------KRYTPRQIRLNFAIHQYDAVMNYSEEQVEQAISKDKAYQEFFQNTK 370
Query: 346 II--------------------------DPAVLSALYNDLNTVSAIQALHKLAREST--- 376
I + +AL + + + I A+ KL +
Sbjct: 371 IYLRESQVTGPQKWTQNDFQISNLLRNTKQVIHAALLKNFDFPTVIDAIDKLINQVNVQI 430
Query: 377 -----KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE----RLI----LLK-- 421
+ + + ILG+ + S I+ ++ E R K
Sbjct: 431 AGKTVRAPLVSSVVQYVNFILGLIGLNYQAQNSNSSDIKSIMAEVCSIRDQVKLAARKGE 490
Query: 422 ---------------MKK----------------------------FSSADYIRK-QLES 437
K F D +R +L
Sbjct: 491 FEAISNIVSQKQFQYEKNLSNGIVDCINQFQQLVLAASQEKNKQQLFQLCDRLRDEELFE 550
Query: 438 KGFILEDYKNPDNGQR 453
G +ED + ++
Sbjct: 551 LGIKIEDKEQASIWKQ 566
>gi|296270626|ref|YP_003653258.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296093413|gb|ADG89365.1| cysteinyl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 451
Score = 255 bits (650), Expect = 2e-65, Method: Composition-based stats.
Identities = 145/432 (33%), Positives = 219/432 (50%), Gaps = 38/432 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T R + EF P + +Y+CGPTV H G R I FD+L R L++
Sbjct: 1 MGLRLYDTFHRAVREFSPRIPGRVSIYLCGPTVVTPPHAGQMRSQIDFDILQRWLKFRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V RN+TD++DKII R+ E IT + F + L CL P+ +
Sbjct: 61 D--VLLCRNVTDVEDKIIGRSISEGT------PWWRITDSVYRMFDRAFADLGCLPPSVE 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI +I+ ++ GHAYE + ++ F +S P YG+ S +++ +++
Sbjct: 113 PRATGHIPEMIEMIEELLARGHAYEHDGDVYFSVASYPRYGALSGQRM--ERLRVTERPA 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWKR EP W+SPWG+GRPGWH+ECSAM+ YLG FDIHGGG +LIF
Sbjct: 171 RGKRDPRDFTLWKRVDLGEPVWDSPWGKGRPGWHLECSAMARRYLGPAFDIHGGGSNLIF 230
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE+AQS ++ A W+HNG + G K+ K G+ + LL +
Sbjct: 231 PHHENELAQSRALG--DEFARFWVHNGQVTYGGEKIRKRLGDPFAVPALLGRVR------ 282
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI-----IDPAVLSALYN 357
+R + HYR ++F++ L EA + + G + A+ +
Sbjct: 283 -PVELRYYLAAAHYRSRLEFSLAALEEAAAAYRRIERFVLRVGADRSPVLPHRFAEAMDD 341
Query: 358 DLNTVSAIQALHKLAREST---------KNHDLLPIFNASAHILGIEVCKEHLN-----K 403
DLN A+ +H E + A +LG++ EH +
Sbjct: 342 DLNVPRALSLVHAAVAEGNAALVTRDHVAAARICGSVRAMLDVLGLDPLSEHWAGGEPLE 401
Query: 404 NISIAIEKLVQE 415
I+ A+ +LV+E
Sbjct: 402 EIAAAVLRLVRE 413
>gi|258570935|ref|XP_002544271.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
gi|237904541|gb|EEP78942.1| cysteinyl-tRNA synthetase [Uncinocarpus reesii 1704]
Length = 692
Score = 254 bits (649), Expect = 2e-65, Method: Composition-based stats.
Identities = 140/459 (30%), Positives = 207/459 (45%), Gaps = 62/459 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R F +DP + Y CGPTVYD AH+G+AR + D+L RLLR
Sbjct: 24 PPLKIWNSLTRSKVPFVPLDPEGRKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERA--------RQEHPSIPINDA--ISIITSKNTQQFVKD 110
Y + V ++ NITD+DDK +A + SI D + +T + +F+ D
Sbjct: 83 YFKFDVRFIMNITDVDDKPDTKADVMLAYLDKLHGSSICGEDYSIFTKLTKRFEDRFMAD 142
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYG------ 163
L + R + IP+++ ++ I+ H AY + + FD ++ G
Sbjct: 143 ARALNIIDADEVTRVSEFIPEIVSFVEQIVQHNFAYVTGDGSVYFDIAAFETVGNHYARL 202
Query: 164 ---SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
+ + + G + + K++ ADF LWK S P EP W SPWG GRPGWHIECS
Sbjct: 203 EPWNRNDTALQADGEGALINKSIEKRSKADFALWKASKPGEPSWPSPWGPGRPGWHIECS 262
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKTANIWIHNGFLNLEGR 276
AM+S LGK DIH GG+DL FPHH+NE+AQS ++ N ++H G L+++G
Sbjct: 263 AMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQWVNYFLHMGHLSIQGS 322
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS NF TI E LE W +R+ LM + + I+ T + K
Sbjct: 323 KMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGSWADGIEITEDLVKAGNAWEEK 377
Query: 337 WPQTS--------------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
AV +L + NT A+ A+ L +
Sbjct: 378 LNNFFLSVRNSSETMTPSSTDDSLADQLKAAQKAVHESLCDSFNTAGAMIAISGLVTQYN 437
Query: 377 KN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
D+ + +ILG+ ++ I
Sbjct: 438 SADKSTLNPQHIKDVAKWVTSIVNILGLNGSAGPDSEEI 476
>gi|309789812|ref|ZP_07684391.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
gi|308228116|gb|EFO81765.1| cysteinyl-tRNA synthetase [Oscillochloris trichoides DG6]
Length = 397
Score = 254 bits (648), Expect = 3e-65, Method: Composition-based stats.
Identities = 143/409 (34%), Positives = 204/409 (49%), Gaps = 35/409 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L R+ F + +YVCG T YD HIG+AR ++FD+L R LR+ E
Sbjct: 1 MRLYNSLSREKDRFVLPADRPVTLYVCGVTPYDTTHIGHARTFLIFDLLVRFLRWQGAE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y +N+TD+DD + ERA ++ + + T+Q + D L + PT+ PR
Sbjct: 60 -VRYCQNVTDVDDPLFERAARDGVK------WQDLAATQTEQLLADYAALNIIMPTYFPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE----QKMGTRVP 180
A+ I MI +I+ +I GHAY + F + P++G +R DE P
Sbjct: 113 ASEEIGTMIPIIERLIELGHAYVIEGNVYFSVQTDPDFGKMARMGYDELLAVANQRGNKP 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K++P DF+LW+ P +P W SPWG GRPGWHIECSAM++ YLG DIHGGG DL
Sbjct: 173 DDPLKRDPLDFVLWQTGKPGDPTWPSPWGPGRPGWHIECSAMATRYLGAQIDIHGGGADL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHH EIAQ IW+H G + L+G KMSKS GN + + L +
Sbjct: 233 IFPHHPCEIAQIEPVTGKRPFVQIWMHTGLVWLDGEKMSKSLGNLVFARDAL-------K 285
Query: 301 SWPAPVIRLAMLMTHYREPIDFT----VQRLTEAEILLSKWPQTSTSKGIIDPA-----V 351
A +R + HYR+ D+ +L + S +DP
Sbjct: 286 EHSADTLRWYLFSQHYRQEFDYQRAEVANAAEAVALLHTALDAVSGDGAPLDPDASRAEF 345
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILG 393
L+AL +DLNT +A+ LH +AR + + A I G
Sbjct: 346 LAALEDDLNTPTALAVLHLMARNTISAAADGANVVAYQQTLHELAQIFG 394
>gi|156543451|ref|XP_001601176.1| PREDICTED: similar to Albumin [Nasonia vitripennis]
Length = 515
Score = 253 bits (645), Expect = 5e-65, Method: Composition-based stats.
Identities = 153/496 (30%), Positives = 218/496 (43%), Gaps = 72/496 (14%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN + + T + Y+CGPTVYD AHIG+A + FD++ R+L + + V
Sbjct: 38 VYNPITKCKTPLILRNNKVATWYMCGPTVYDSAHIGHACTYVKFDIIRRIL-SEFFDINV 96
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V +TDIDDKII+RA + + IT K ++F+ D L L P + T
Sbjct: 97 VLVMGLTDIDDKIIKRANESG------QSWQSITQKYEKEFISDMDSLNVLKPFATCKVT 150
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
N+IPQ++ ++ I+ AY + + FDTS+ NYG K
Sbjct: 151 NYIPQIVEFVEKIVNKNGAYVGKDGSVYFDTSNYRNYGKLD--------TPQAQEPHPDK 202
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++ DF LWK S EP WESPWGRGRPGWHIECSA++S LG DIH GG+DL FPHH
Sbjct: 203 RSSLDFALWKASKENEPYWESPWGRGRPGWHIECSAIASTVLGSNIDIHSGGMDLAFPHH 262
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPA 304
ENE AQSCC + N W+H G L+LE KMSKS N ++I LL ++ A
Sbjct: 263 ENEEAQSCCYHEKNQWINYWLHTGHLHLEGDTKMSKSLQNTVSIPSLL-------KTQTA 315
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-------- 356
R+ L++ YR+ + F+ + A L K ++ L
Sbjct: 316 NQFRMLCLLSDYRKNVIFSKTLVHTAITTLKKIEFFTSDCNEYICGKLDCGNVNSVELLK 375
Query: 357 --------------NDLNTVSAIQALHKLARESTKNHDLLPIFNA------SAHI----- 391
+D +T A+ A+ KL K + A A +
Sbjct: 376 CLEDTRQEVNSALADDFDTAKAMHAILKLISLGNKMIQAKHVTTAARETGSIAAVSNYVQ 435
Query: 392 -----LGIEVC-KEHLNKNISIAIEKLVQERLI------LLKMKK---FSSADYIRKQLE 436
LGI + +IS ++ V R K + D +RK L
Sbjct: 436 SVISKLGISQSMGSKQSNDISHVLDITVAFRNEIRSIALAKSEKDVESLKACDNLRKNLS 495
Query: 437 SKGFILEDYKNPDNGQ 452
G + D + +
Sbjct: 496 DFGVDIRDRQGKSSWT 511
>gi|284931715|gb|ADC31653.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
Length = 435
Score = 252 bits (643), Expect = 1e-64, Method: Composition-based stats.
Identities = 154/461 (33%), Positives = 230/461 (49%), Gaps = 50/461 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+TL + + ID + I +YVCGPTVYD HIGN RP++ FDVL RLL + K
Sbjct: 1 MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEHS--NK 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V NITDIDDKII +A++ +N + +T + T + + L P +
Sbjct: 56 KVNFVHNITDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDALNIKLPKIV-K 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + +I I+ I +AYE + +I FDT+ IP+YG S+RK+DEQ G RV +
Sbjct: 109 VTDVMNGIIKYIEKIYDKQYAYELDGDIYFDTTRIPDYGVLSKRKLDEQISGIRVKSNEN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS-HYLGKVFDIHGGGLDLIFP 243
K +P DF+LWK+ T W S +G GRPGWH EC+ + + K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKK-TVNGIKWNSKFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ + AN W+H G L ++ KMSKS NFI + L+E+ +
Sbjct: 228 HHENENAQNLALHN-KNLANCWVHVGHLLIDNEKMSKSLNNFIYVKHLIESHNY------ 280
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIIDP 349
IR T + +P++F + A+ + K S ++
Sbjct: 281 -RAIRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEH 400
AL+++LN +A + + L + ++ I I GI H
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIKVLNESIAYKKIDENIWAYQQLIWCLEIYGIVPDMIH 399
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ I + + LL K + AD IR +L +K +
Sbjct: 400 NEQIIDQ-----INQWSELLNNKDYEKADSIRNKLINKKVL 435
>gi|85000123|ref|XP_954780.1| cysteinyl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65302926|emb|CAI75304.1| cysteinyl-tRNA synthetase, putative [Theileria annulata]
Length = 694
Score = 251 bits (642), Expect = 1e-64, Method: Composition-based stats.
Identities = 154/524 (29%), Positives = 225/524 (42%), Gaps = 95/524 (18%)
Query: 5 IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + +R Y CGPTVYD AH+G+AR I D + +L Y
Sbjct: 68 LYVKNSLNPSSKVEFVPEEGRKVRWYTCGPTVYDAAHMGHARTYIACDTIRSILE-NYLN 126
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ +V NITD++DKII+RA E + +TS ++F D L P
Sbjct: 127 YDLFFVENITDVEDKIIQRALNEG------KPFTEVTSHWEKEFWNDMLSLGVSLPDCIT 180
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
R ++++ +++ I+ I+ +G+AY ++ + FD S N G K++
Sbjct: 181 RVSDYMTEIVDFIKKILDNGYAYVSDGSVYFDIESFRNSGKHVYAKLEPTSFNDLNRILD 240
Query: 182 --------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFD 232
+KK+ +DF LWK+S EP WESPWGRGRPGWHIECSAMS+ G +VFD
Sbjct: 241 AEGTLGEVSLNKKSKSDFALWKKSKVNEPSWESPWGRGRPGWHIECSAMSTCIFGKEVFD 300
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NEIAQS + AN ++H G L++ G KMSKS NFIT+ E+L
Sbjct: 301 IHSGGIDLRFPHHDNEIAQSEAYFDTNRWANYFLHFGHLHIHGLKMSKSLKNFITVKEML 360
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV----------------------QRLTEA 330
+ IRL L + Y ++F
Sbjct: 361 S-------KYNKRQIRLLFLNSRYDSTLNFNSGPDGMDEPIAIDETFFNFFSTLNSKLSN 413
Query: 331 EILLSKWPQTSTSK----GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------- 376
L KW + + + V +A ++ +T + L K
Sbjct: 414 LSLDQKWSEDDLNLNNEFEKLKSNVHAAFLDNFDTPKVLSNLCKFISTVNTFMFDPKNQI 473
Query: 377 KNHDLLPIFNASAHILGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMKKF 425
K L ILG+ K ++N + +LV R F
Sbjct: 474 KYTQALLFKQYLYRILGVLKLVEPGCEYGVENKSGSSENEKSLLNELVDLRQKTRA---F 530
Query: 426 SSA------------------DYIRKQ-LESKGFILEDYKNPDN 450
+ A D +R Q L + G ILED + +
Sbjct: 531 AQATLKNKVDSETTKELLKQCDRLRDQTLPNLGIILEDCDDGSS 574
>gi|301778487|ref|XP_002924663.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Ailuropoda melanoleuca]
Length = 611
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 144/495 (29%), Positives = 220/495 (44%), Gaps = 91/495 (18%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y CGPTVYD AH+G+A + FD++ R+L +G + V ITD+DDKII RA +
Sbjct: 124 YSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CNIIMVMGITDVDDKIIRRAAE--- 179
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
+N + + + + + F +D L L PT R T +IPQ+I I+ II +GHAY
Sbjct: 180 ---MNVSPASLANLYEEDFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYST 236
Query: 149 -NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ FD SI + + + P K++ +DF LWK + P E W SP
Sbjct: 237 AQGNVYFDLRSIGD---KYGKLVGAVPSPVGEPVDSDKRHASDFALWKAAKPQEVFWASP 293
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECS +SS G+ DIH GG DL FPHHENEIAQ + + N ++H
Sbjct: 294 WGKGRPGWHIECSTISSLVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLH 353
Query: 268 NGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+G L++ + KMSKS N+ITI + L +++P V RL + + YR ID++
Sbjct: 354 SGHLHVKGKEEKMSKSLKNYITIKDFL-------KTFPPDVFRLFCMRSAYRSAIDYSDG 406
Query: 326 RLTEAE----------------------ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ EA+ + AV +AL +D +T +
Sbjct: 407 TMLEAKQLLLAAAAFVEDARAYMKGQLVCGPVRDDVLWERLRHTKDAVKAALADDFDTPA 466
Query: 364 AIQALHKLARESTKN-----------------HDLLPIFNASAHILGIEVCKEHLNKNIS 406
A+ A+ L + ++ +GI + S
Sbjct: 467 AVDAVMDLVHHGNRQLKAHAKEPGGPRSPAVFGSIVSYVERFFETVGISLADRQSVSGDS 526
Query: 407 ------IAIEKLVQERLILLKMKKFSSA-----------------------DYIRKQLES 437
+E+LV+ RL + + F+ A D +R+ L +
Sbjct: 527 SRATLHSVVEELVRFRLQVRQ---FALATGAATREARRQQQLDRQPLLEACDALRRDLVT 583
Query: 438 KGFILEDYKNPDNGQ 452
G ++D + +
Sbjct: 584 HGISIKDRSSTSTWE 598
>gi|328952801|ref|YP_004370135.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
gi|328453125|gb|AEB08954.1| cysteine synthase [Desulfobacca acetoxidans DSM 11109]
Length = 770
Score = 251 bits (641), Expect = 2e-64, Method: Composition-based stats.
Identities = 128/491 (26%), Positives = 209/491 (42%), Gaps = 56/491 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + +NT R F +Y GPT+ + + +AR ++V D+L R L Y
Sbjct: 304 RPTLCFFNTEGRSKQAFLPQHLGQASIYTDGPTMDGYLTLTDARRLMVADLLRRYLEYRG 363
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V V N+TD+DD+ I A ++ T + +F D L
Sbjct: 364 YQ--VKQVVNLTDLDDRTIRGAVAAGL------PLNAFTQQYIDEFFADIDALRLKRAEV 415
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+AT+HI M+ L++ ++ G+AYE + FD S YG S +++ ++G V
Sbjct: 416 YPKATDHIDDMVALVKRLLEKGYAYEKLRSVYFDISRFRGYGKLSHVNLEKIRLGKTVDL 475
Query: 182 KYHK-KNPADFILWKRSTPMEPG----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
++ NP DF L KR+ E + + WG RPGWH+EC+AM+ +LG+ FDI G
Sbjct: 476 DDYEKDNPCDFTLLKRAKLGELKLGLYYPTEWGNVRPGWHLECAAMALKHLGESFDIVTG 535
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G +LIFPHHEN IA + A W+HN + L ++ + T+ L +T
Sbjct: 536 GSNLIFPHHENVIAICEAVSG-KPLARYWLHNESV-LGVMAAAEESEGPTTVRRLFQTGV 593
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------- 347
+G +R +L THYR+ + + + L A + +
Sbjct: 594 WGVD------LRFLLLATHYRKTLHLSNEALDAARRSRRRLDLFLERLNRVNGGKPEGDL 647
Query: 348 -------DPAVLSALYNDLNTVSAIQALHKLAREST-----------KNHDLLPIFNASA 389
+ +AL +DLN A+ AL RE + ++ F
Sbjct: 648 PERLARLESEFTAALDDDLNIAGALAALFNFQREINIWMDRGRLAEAEAEAIIDQFRQFD 707
Query: 390 HILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+LG+ AIE+ ++ER + F+ AD IR++L G + D
Sbjct: 708 RVLGVMNFPTPAPT--DAAIEEKLREREEARGRQDFARADEIRQELAVLGIEVLDTPTGP 765
Query: 450 NGQRMTRWKQK 460
W+++
Sbjct: 766 A------WRRR 770
>gi|71026881|ref|XP_763084.1| cysteinyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68350037|gb|EAN30801.1| cysteinyl-tRNA synthetase, putative [Theileria parva]
Length = 659
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 149/524 (28%), Positives = 228/524 (43%), Gaps = 95/524 (18%)
Query: 5 IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + ++ Y CGPTVYD AH+G+AR I D + +L Y
Sbjct: 68 LYVKNSLSPSSKVEFVPEEGRKVKWYTCGPTVYDVAHMGHARTYIACDTIRSILE-NYLN 126
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ +V NITD+DDKII+RA E S S ++S ++F D L P
Sbjct: 127 YDLFFVENITDVDDKIIQRALNEGKS------YSEVSSHWEREFWNDMLSLGVSLPDCIT 180
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE-- 181
R ++++ +++ I+ I+ +G+AY ++ + FD + + G K++
Sbjct: 181 RVSDYMVEIVDFIKKILDNGYAYVSDGSVYFDIEAFRSSGKHVYAKLEPTSFNDLNRILD 240
Query: 182 --------KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFD 232
+KK+ +DF LWK+S EP W+SPWG+GRPGWHIECSAMS+ G +VFD
Sbjct: 241 AEGTLGEVSVNKKSKSDFALWKKSKVNEPSWDSPWGKGRPGWHIECSAMSTCIFGKEVFD 300
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NEIAQS K AN ++H G L++ G KMSKS NFI+I E+L
Sbjct: 301 IHSGGVDLRFPHHDNEIAQSEAYFDSNKWANYFLHFGHLHIHGLKMSKSLKNFISIKEML 360
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFT--VQRLTEAEILLSKWPQTSTSK------ 344
+ IR+ L + Y ++F + E + + ++
Sbjct: 361 T-------KYNKRQIRILFLNSRYDSTLNFNSGPDGMDEPVSIDETFFNFFSTLNSKLSS 413
Query: 345 ------------------GIIDPAVLSALYNDLNTVSAIQALHKLAREST---------- 376
+ V +A ++ +T + L K
Sbjct: 414 LSVDQKWSEDDLNLNKEFEKLKSNVHAAFLDNFDTPKVLSNLCKFISTVNTFISDSKTQI 473
Query: 377 KNHDLLPIFNASAHILGIEVC-----------KEHLNKNISIAIEKLVQERLILLKMKKF 425
K L ILG+ K ++N + +LV R F
Sbjct: 474 KYTQALLFKQYLYRILGVLKLVEPGCEYGVENKSESSENEKSLLNELVNLRQKTRA---F 530
Query: 426 SSA------------------DYIRKQ-LESKGFILEDYKNPDN 450
+ A D++R Q L + G ILED + +
Sbjct: 531 AQATLKNNLDSEATKDLLKHCDHLRDQKLPNLGIILEDCDDGTS 574
>gi|289739575|gb|ADD18535.1| cysteinyl-tRNA synthetase [Glossina morsitans morsitans]
Length = 537
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 138/514 (26%), Positives = 225/514 (43%), Gaps = 74/514 (14%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++ ++IYN + ++ F + + Y CGPTVYD H+G+A + D+L R+LR++
Sbjct: 34 IETDLRIYNCVAKRNVPFILNNQYFVTWYTCGPTVYDSCHLGHASCYVKLDILQRILRHH 93
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V+ NITDIDDKII + S + + +F D +L L P
Sbjct: 94 FNLNIVS-AMNITDIDDKIIAK------SENLGKDWRDVARFYEAEFWTDLKKLNVLEPN 146
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+ R T+HIP++I I+ II AY ++ + D S+ NYG +DEQ ++
Sbjct: 147 VKARVTDHIPKIINYIERIIKKRMAYVGDDNSVYMDVKSVKNYGKLQNISLDEQNAEEQL 206
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ KK+P DF LWK P + SPWG GRP WHIECS ++ G IH GG+D
Sbjct: 207 EKG-IKKSPMDFALWKARK-TGPTFPSPWGDGRPAWHIECSTLAGMIFGDNVHIHAGGID 264
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKF 297
L FPHHENE QSC ++ N W+H G L++ E +KMS S N IT+ ++L
Sbjct: 265 LRFPHHENEECQSCVYHDNKQWVNYWLHTGHLSMKGESQKMSNSLKNTITVKDML----- 319
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----------------- 340
+ + R+A ++HYR +D++ + + A+ L+K+
Sbjct: 320 --KKYSGDDFRMACALSHYRNSMDYSDELMEMAKSNLNKFKGFRTDCLAYLSGKKTAVGL 377
Query: 341 -----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL--------LPIFNA 387
+ + S++ +D NT +I L ++ + +A
Sbjct: 378 DDSAIFENLKFAQSHIDSSIKDDFNTARSITTLMDQISSISRCINAQPGSEVQTASSLDA 437
Query: 388 SAHI----------LGI--------EVCKEHLNKNISIAIEKLVQ----ERLILLKMKK- 424
A + G E+ +++ ++ ++ R + K
Sbjct: 438 VAAVSNYVSFILQSFGFAFVTGQEHELNTTTEQFDLNALLDDILNTRKSIREKAVADKND 497
Query: 425 --FSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
F D +RK L G + D+ + R
Sbjct: 498 HLFEICDDLRKCLLQNGIDIRDHSKGSSWTFTKR 531
>gi|541386|pir||F53402 cysteine-tRNA ligase (EC 6.1.1.16) - Bacillus stearothermophilus
(fragment)
Length = 221
Score = 250 bits (639), Expect = 3e-64, Method: Composition-based stats.
Identities = 99/227 (43%), Positives = 137/227 (60%), Gaps = 8/227 (3%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++YNTL RK F+ ++P+ ++MYVCGPTVY++ HIGNAR IVFD + R L +
Sbjct: 1 MSSIRLYNTLTRKKEPFEPLEPNKVKMYVCGPTVYNYIHIGNARAAIVFDTIRRYLEFRG 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ VTYV N TD+DDK+I+ AR+ S+P I + + + +D L C
Sbjct: 61 YD--VTYVSNFTDVDDKLIKAARELGESVP------AIAERFIEAYFEDIQALGCKKADI 112
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
PR T +I +I IQ +I G+AYE + ++ + T P YG S + IDE + G R+
Sbjct: 113 HPRVTENIGTIIEFIQALIDKGYAYEVDGDVYYRTRKFPGYGKLSHQSIDELQAGARIEV 172
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
K +P DF LWK + E W+SPWG+GRPGWHIECSAM+ YLG
Sbjct: 173 GEKKDDPLDFALWKAAKEGEICWDSPWGKGRPGWHIECSAMAGRYLG 219
>gi|325120070|emb|CBZ55622.1| hypothetical protein NCLIV_060470 [Neospora caninum Liverpool]
Length = 671
Score = 249 bits (637), Expect = 5e-64, Method: Composition-based stats.
Identities = 112/317 (35%), Positives = 167/317 (52%), Gaps = 17/317 (5%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ EF + + Y CGPTVYD +H+G+AR + FDV+ R++ Y VT
Sbjct: 16 NSMAGGKVEFVPQKGNRVCWYGCGPTVYDASHMGHARTYVTFDVIRRIMSD-YLNYDVTM 74
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
NITDIDDKII+R+ ++ + ++F D L P+ R + +
Sbjct: 75 CMNITDIDDKIIKRSIEQGVD------FLTLARHWEKEFFNDMAALNVRLPSVVTRVSEY 128
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-------- 180
IP+++ LI+ I+ +G+ YE+ + FDT + +++ +
Sbjct: 129 IPEVLSLIERIVKNGYGYESQGSVYFDTQTFRKTDKHIYGRMEPSSVSDESRVLEGEGEL 188
Query: 181 --EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K++P DF LWK++ EP W+SPWG+GRPGWHIECSAM+ L DIH GG+
Sbjct: 189 GLTSSEKRHPCDFALWKKAKEGEPSWDSPWGKGRPGWHIECSAMADSILPFPLDIHSGGI 248
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHH+NE+AQS A+ + N ++H+G L++ G KMSKS NFITI E L
Sbjct: 249 DLRFPHHDNELAQSEAANDRPQWVNYFLHSGHLHIHGAKMSKSLKNFITIKECLSRFTAR 308
Query: 299 GRSWPAPVIRLAMLMTH 315
+ R++ H
Sbjct: 309 QIRLLCLMNRVSSQEPH 325
>gi|68063221|ref|XP_673620.1| hypothetical protein [Plasmodium berghei strain ANKA]
gi|56491605|emb|CAI02493.1| hypothetical protein PB300790.00.0 [Plasmodium berghei]
Length = 386
Score = 249 bits (637), Expect = 5e-64, Method: Composition-based stats.
Identities = 124/371 (33%), Positives = 190/371 (51%), Gaps = 25/371 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + + I+ Y CGPTVYD AH+G+AR + FD++ R+L Y +
Sbjct: 22 NLMVNNSLTHSKVEFVPQEGNTIKWYACGPTVYDAAHLGHARTYVSFDIIRRILT-NYFK 80
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V NITDIDDKII+R+ +E + + K +F +D L L P+
Sbjct: 81 YDVFMVINITDIDDKIIKRSEEEKV------NFTELARKWEYEFWEDMKSLNVLLPSSIT 134
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-- 180
R + ++ ++I I+ II + +AY + + FD + + +++ +
Sbjct: 135 RVSEYVNEIIKFIEKIIENKYAYVSSEGSVYFDIDAFKKNPNHFYARMEPMSVKDETKIL 194
Query: 181 --------EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+KKN DF LWK S P EP W+SPWG+GRPGWHIECS M+S+ LGKV D
Sbjct: 195 EGEGDLGVISKNKKNSYDFALWKSSKPNEPSWDSPWGKGRPGWHIECSTMASNILGKVLD 254
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
IH GG+DL FPHH+NE+AQS + N ++H+G L++EG KMSKS NFITIN++
Sbjct: 255 IHSGGVDLRFPHHDNELAQSEAFFDHSQWVNYFLHSGHLHIEGLKMSKSLKNFITINDMF 314
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
+ + IR+ L + + ++ + + + + I +
Sbjct: 315 -------KQYTCARIRILFLFNSWDSFMSYSPNGEGKTQCIEIDQSFANFFAIINMITMF 367
Query: 353 SALYNDLNTVS 363
DL +
Sbjct: 368 DLNECDLYWNA 378
>gi|271969633|ref|YP_003343829.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|270512808|gb|ACZ91086.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 459
Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats.
Identities = 146/474 (30%), Positives = 227/474 (47%), Gaps = 42/474 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y+T R++ ++RMY CGPTVY +AH+GN R ++ D++ R+
Sbjct: 1 MLRLYDTRNRQVGPVLPEGARSMRMYTCGPTVYRYAHVGNFRSYVLADLIRRVSERQ--R 58
Query: 64 KCVTYVRNITDI-------------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
V RNITD+ +DKI+ +AR E + I F+ D
Sbjct: 59 IRVVACRNITDVGHLVDDAEIDPAGEDKILLQARAEGRTGL------EIARFYEAAFLSD 112
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRK 169
T L P H PRAT I MI +I +I GHAY + + FD +S P YG S +
Sbjct: 113 TATLNIRPPEHSPRATETIDLMIEMIAKLIEKGHAYPTPDGSVFFDAASFPTYGEISGNR 172
Query: 170 IDEQKMGTRVP-EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+D K G R+ K+ AD+ LWK + E WE+PWGRG PGWHIECSAMS +LG
Sbjct: 173 LDRLKPGHRLEGVDPRKRFHADWALWKP-SDREMTWEAPWGRGFPGWHIECSAMSLRFLG 231
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ D+H GG+DL FPHHE+E AQS E W+H L +GRKM+KS GN + +
Sbjct: 232 EHIDVHTGGIDLRFPHHEDERAQSDATAGHE-VVRHWVHGEHLLFDGRKMAKSTGNVVLL 290
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
++++ +RLA+L YR+ ++ T L A+ L +W
Sbjct: 291 QDVVDA------GLDPLAVRLALLEHRYRQQMNLTWDTLRAADRTLRRWRSHVAEWSETP 344
Query: 349 PAVL---------SALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASAHILGIEVC- 397
+ +A +DL+T A++ + +L R+ + F ILG+++
Sbjct: 345 SRPMPAERVSRIEAAFDDDLDTPLALRLMRELERDDSIAPGSRFEAFLHLDQILGLDLSI 404
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
++++ L++ RL + ++ +D +R +L + G + D
Sbjct: 405 DIGRSRSLPPGAADLLERRLRARAARDWAVSDRLRDELATMGVQVTDTPEGQTW 458
>gi|188524105|ref|ZP_03004185.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195867746|ref|ZP_03079747.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198273408|ref|ZP_03205944.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|195660058|gb|EDX53438.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195660601|gb|EDX53857.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|198249928|gb|EDY74708.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
Length = 436
Score = 249 bits (636), Expect = 7e-64, Method: Composition-based stats.
Identities = 148/462 (32%), Positives = 225/462 (48%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ K+ E I I +Y CGPTVY+ HIGNARP+I DVLYR L+ + E
Sbjct: 1 MKLYDSYSNKLVE---ISDKLISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKHNIET 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 58 --KYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIINYIQKLIDKQAGYFVGDDVYFDTKKALNYGQLSKRDLENDIVGMRIENVVN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KRNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINAYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA-------QYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
V+R Y++PI F+ + + + E + K T +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEIFKIKNTIYNAKNYLYFNHELKSLVPIDHFK 339
Query: 350 AVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI----FNASAHILGIEVCKE 399
+ +DL+ V + +H ++ KN + L + ILGIE
Sbjct: 340 PFDELINDDLDFVGIVDLIHISVKKINTLIKENKNINELKLNLVQLLYMLDILGIEFIDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K ++ AD +RK+L + G +
Sbjct: 400 HNDENL-----ALLNAWKNYVDKKDYTKADELRKELINIGIL 436
>gi|294660604|ref|NP_853461.2| cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
gi|187608843|sp|Q7NAH7|SYC_MYCGA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|284812267|gb|AAP57029.2| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
gi|284930959|gb|ADC30898.1| Cysteinyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
Length = 435
Score = 249 bits (635), Expect = 8e-64, Method: Composition-based stats.
Identities = 150/461 (32%), Positives = 229/461 (49%), Gaps = 50/461 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y+TL + + ID + I +YVCGPTVYD HIGN RP++ FDVL RLL + K
Sbjct: 1 MKLYDTLTKTNVD---IDANEINIYVCGPTVYDHIHIGNLRPIVTFDVLRRLLEHS--NK 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V N+TDIDDKII +A++ +N + +T + T + + L P +
Sbjct: 56 KVNFVHNLTDIDDKIINQAQR------LNLSEEEVTKRYTSAYFEILDELNIKLPKIV-K 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T+ + +I I+ I +AYE + +I FDT+ I +YG S+RK+DEQ G RV +
Sbjct: 109 VTDVMSGIIKYIEKIYDKQYAYELDGDIYFDTTRIADYGVLSKRKLDEQISGIRVKSNEN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS-HYLGKVFDIHGGGLDLIFP 243
K +P DF+LWK++ W S +G GRPGWH EC+ + + K F IHGGG+DL+FP
Sbjct: 169 KTSPNDFVLWKKTVEG-IKWNSRFGLGRPGWHTECAYIIDQEFKQKGFVIHGGGIDLVFP 227
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE AQ+ + N W+H G+L ++ KMSKS NFI + L+E+ +
Sbjct: 228 HHENENAQNLALHN-KNLVNCWVHVGYLLIDNEKMSKSLNNFIYVKHLIESHNY------ 280
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW--------------PQTSTSKGIIDP 349
IR T + +P++F + A+ + K S ++
Sbjct: 281 -RAIRWVFYNTAHTQPLNFDGTIIKAAQKDVEKIISTVNRFRTFLIANKNNIPSSSLVCE 339
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKEH 400
AL+++LN +A + + L + ++ I I GI H
Sbjct: 340 EFKKALFDNLNFANATKVIWDLIKVLNESIAYKKIDENIWAYQQLIWCLEIYGIVPDMIH 399
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ I + + LL K + AD IR +L +K +
Sbjct: 400 NEQIIDQ-----INQWSELLNNKDYEKADSIRNKLINKKVL 435
>gi|195057996|ref|XP_001995365.1| GH23122 [Drosophila grimshawi]
gi|193899571|gb|EDV98437.1| GH23122 [Drosophila grimshawi]
Length = 533
Score = 249 bits (635), Expect = 9e-64, Method: Composition-based stats.
Identities = 139/515 (26%), Positives = 220/515 (42%), Gaps = 85/515 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I+IYN R +P + Y CGPTVYD H+G+A + D++ R+LR Y+
Sbjct: 26 IQIYNHTVRGKVPLVLRNPHVVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDYFKYN 85
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+R+R+ + +F D RL P +
Sbjct: 86 LVT-AMNITDVDDKIIKRSRETG------RNWLELAQAFAAEFKLDMHRLNVKPPNLRAH 138
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ +I + I+ ++ AY + + + FD +S +YG + ++ P+
Sbjct: 139 VSANIATIQLFIEQLLATQQAYVSQDNSVYFDVASCASYGKLEKL----LQLQESNPQSS 194
Query: 184 HKKNPADFILWKRSTP------MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K+ ADF LWK EP WE+ W G GRPGWHIECSA++ + G+ DIH G
Sbjct: 195 GKRTAADFALWKAKKEGEAAQQDEPSWEASWGGVGRPGWHIECSAIAGKFFGRQLDIHAG 254
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLET 294
GLDL FPHHENE AQ C ++ N W+H G L+L + KMSKS GN I++ E+L
Sbjct: 255 GLDLRFPHHENEEAQCCAHYETDQWVNYWLHTGQLHLVGDEHKMSKSRGNTISVEEMLT- 313
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---- 350
+ A R+A L+++YR + + + A L K+
Sbjct: 314 ------KYTADEFRMACLLSNYRNAMPYGDSLMITARQTLRKFKNFHADLSAYMQFQKPL 367
Query: 351 ------------------VLSALYNDLNTVSAIQALHKLARESTKNHDL----------- 381
++L +D +T A+ L ++ +
Sbjct: 368 KLLDEGALQAQLKHTMLEFDNSLRDDFDTARALAVLMDQMSSISRCINEQQSDAEQEPAY 427
Query: 382 -LPIFNASAHI-------LGIEVCKEHLNK------NISIAIEKLVQERLILL------- 420
L + A+ + GI + + +I+ I L+ R L
Sbjct: 428 CLDLLLAAGNFIGNAMQNFGITPFDQQQQEQLNPTTDINALIGDLLAVRRQLREKAIGES 487
Query: 421 --KMKK-FSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ + D +R L+ GF + D+K+ +
Sbjct: 488 VIQNRQMLAVCDQLRDLLQRHGFQVRDHKHGSSWT 522
>gi|156082812|ref|XP_001608890.1| cysteinyl-tRNA synthetase [Babesia bovis T2Bo]
gi|154796140|gb|EDO05322.1| cysteinyl-tRNA synthetase, putative [Babesia bovis]
Length = 662
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 147/521 (28%), Positives = 218/521 (41%), Gaps = 90/521 (17%)
Query: 5 IKIYNTLER-KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ + N+L EF + I Y CGPTVYD AH+G+AR + D + +L Y
Sbjct: 59 LLLRNSLAGDAKVEFVPENGRRINWYCCGPTVYDTAHLGHARTYVACDTIRSILE-RYFN 117
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V V N+TDIDDKII+RA E + + S+ +F +D L P
Sbjct: 118 YDVHLVINVTDIDDKIIQRANDEGCK------FNELASRWEHEFWEDMAALGVDPPNVIT 171
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R + +P++I I+ I+ +G+AYEA+ + FD + K++
Sbjct: 172 RVSEFLPEIISYIETIMKNGYAYEADGSVYFDIDAFIGSDKHVYAKLEPNSYNDLCRITD 231
Query: 184 ----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK--VF 231
HKK+P DF LWK++ P EP W SPWG GRPGWHIECSAM S+ GK +
Sbjct: 232 GEGTLGEVSTHKKSPRDFALWKKAKPGEPFWSSPWGEGRPGWHIECSAMCSNVFGKDTII 291
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG+DL FPHH+NEIAQS + N ++H G L+++G KMSKS NFI+I +L
Sbjct: 292 DIHSGGIDLKFPHHDNEIAQSEAFSDRNQWVNYFLHFGHLHIQGLKMSKSLKNFISIKQL 351
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ-------------------------- 325
L + IR+ L + + +++ +
Sbjct: 352 L-------NKYNKRQIRILFLTSRHDGTLNYNPEPQGMAEAIAIDETFFNFFSLLNSRLD 404
Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL---- 381
+ A+ L + +T + V A ++ +T +Q++
Sbjct: 405 KRENAQKLGEDDVRLNTEFERLRDTVHGAFLDNFDTPKVLQSMCAFISTLNAYLSTPQSY 464
Query: 382 ------LPIFNASAHILGIEVCKE----------HLNKNISIAIEKLVQERLILL----- 420
L I IL I KE + +E L+ R
Sbjct: 465 LRQALGLSIKKYMYKILEILKLKEPGTEYGQDENQESSVSGPLLEHLLNFRAKTRLFAQH 524
Query: 421 --KMKK---------FSSADYIRKQ-LESKGFILEDYKNPD 449
K K+ D +R + L G +LED +
Sbjct: 525 CMKTKEVDVGKTADLLKLCDLVRDEQLPELGILLEDRDGGE 565
>gi|270001919|gb|EEZ98366.1| hypothetical protein TcasGA2_TC000823 [Tribolium castaneum]
Length = 511
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 146/505 (28%), Positives = 219/505 (43%), Gaps = 78/505 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK++N R + + + Y CGPTVYD +HIG+A + D++ RLLR+ Y
Sbjct: 26 IKVFNCTARTKVPLIVKNKNLVTWYTCGPTVYDSSHIGHASCFVKLDIIQRLLRH-YFNL 84
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V V NITDIDDKII RA + K +F KD L P R
Sbjct: 85 NVVTVMNITDIDDKIIARAN------TAKVPPKELAKKFEAEFWKDLDALDVRRPDCVLR 138
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T ++ + I+ +I G AY+A + + FD + NY D +
Sbjct: 139 VTENMDVIKNFIRELIDKGKAYKAGDNSVYFDVGAYDNYAKLQNIGEDAPE------PSK 192
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY----------LGKVFDI 233
KK+ DF LWK + P E W S WG+GRPGWHIECSA++ H LG DI
Sbjct: 193 FKKSKMDFALWKAAKPGEISWVSEWGKGRPGWHIECSALAGHVLVPTIRNNTSLGPEIDI 252
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG-RKMSKSNGNFITINELL 292
H GG+DL FPHHENE AQSC + N W+H G L+L+ +KMSKS N I+I+ +L
Sbjct: 253 HAGGIDLRFPHHENEEAQSCARYCRPQWVNYWLHTGHLHLKDSQKMSKSLHNTISISSML 312
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ--------------RLTEAEILLSKWP 338
E AP R+A LM+HYR ++++ + + + L+ +
Sbjct: 313 EDTT-------APAFRMACLMSHYRSRMEYSNEFVITASKVLQNYINFVDNCQNYLNGYL 365
Query: 339 QTSTSKGIIDPAVLSALY-------NDLNTVSAIQALHKLARESTKNH------------ 379
+ + V+ + +D NT I +++L
Sbjct: 366 KADVDNDTVSKLVVESANKIHSALIDDFNTSEVISTINELISAVNSILHSSRTDLCDTKS 425
Query: 380 ----DLLPIFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLK----MKK---FS 426
+ +++ ++ GI V K+ + N + L R + + K
Sbjct: 426 VAVIAASNLVSSTLNMFGINVNKKQSSVCDNYVEVMNILNDFRQSIRQLGISNKDKNVLE 485
Query: 427 SADYIRKQLESKGFILEDYKNPDNG 451
D +R L+S G ++D+ +
Sbjct: 486 LCDKVRDNLKSIGITIKDHGKMSSW 510
>gi|195380357|ref|XP_002048937.1| GJ21318 [Drosophila virilis]
gi|194143734|gb|EDW60130.1| GJ21318 [Drosophila virilis]
Length = 566
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 139/513 (27%), Positives = 220/513 (42%), Gaps = 85/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I+IYN R +P + Y CGPTVYD H+G+A + D++ R+LR ++
Sbjct: 60 IRIYNHSVRGKVPLVLRNPQMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRDHFKYN 119
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+R+R+ + +F ++ T L P +
Sbjct: 120 LVT-AMNITDVDDKIIKRSRETG------RNWLELAHAYDAEFKENMTWLNVKPPNLRAH 172
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ +IP + I ++++ AY A + + FD S NYG + + +
Sbjct: 173 VSANIPVIQRFIDQLLVNKQAYVAQDNSVYFDVSKYANYGKLEKISKEAH-----AVAEM 227
Query: 184 HKKNPADFILWKRST-PMEPGWESPWGR-GRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP W + WG GRPGWHIECSA++S + G D H GGLDL
Sbjct: 228 GKRNAADFALWKAQKEEHEPSWPASWGGAGRPGWHIECSAIASMFFGNKVDFHAGGLDLR 287
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + ++ N W+H G L+L+ +KMSKS GN +T+ +LL
Sbjct: 288 FPHHENEEAQCCAHFKTDQWVNYWLHTGQLHLQGEEQKMSKSLGNTVTVEQLL------- 340
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+ + A R+A L+++YR + ++ Q + A L K+
Sbjct: 341 QKYTADEFRMACLLSNYRNAMQYSDQLMLTARQTLRKFKNFHADLSAYMQFQKPLKLLDQ 400
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
++L +D +T I L ++ + L +
Sbjct: 401 GALQAQLKHMVQEFDNSLRDDFDTARCIAVLLDQMSSISRCINEQQADAQQDPAHCLDLL 460
Query: 386 NASAHI-------LG-----------IEVCKEHLNKNISIAIEKLVQERLILLKM----- 422
A+ + G ++ +I+ I ++ R L +
Sbjct: 461 LAAGNFISVAMLNFGISPLAALKQQQLQPADATARVDINALIADVLAIRCQLREQAVNGN 520
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K + D +R L+ GF + D+K +
Sbjct: 521 VKNVELLALCDRLRNLLQRHGFSVRDHKKGSSW 553
>gi|196006167|ref|XP_002112950.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
gi|190584991|gb|EDV25060.1| hypothetical protein TRIADDRAFT_25636 [Trichoplax adhaerens]
Length = 532
Score = 248 bits (632), Expect = 2e-63, Method: Composition-based stats.
Identities = 133/506 (26%), Positives = 202/506 (39%), Gaps = 81/506 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IK+YN+L Y+CGPTVYD H+G+A + FD++ R++ +
Sbjct: 37 IKVYNSLTNSKVSLILPQDKLATWYMCGPTVYDSPHLGHASSYVKFDIIRRIMTDL-FDI 95
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ V ITDIDDKI++RA + K ++F++D L L T R
Sbjct: 96 DIVMVMGITDIDDKIVQRAADTKTG------FRDLARKYEKEFLEDMECLNVLRATRVTR 149
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T HI +I I+ I HG+AY+ + + F T +
Sbjct: 150 VTEHIDHIIKFIEKIFQHGYAYKTSDGSVYFYTEKYGDRYGKLAPSRQTIHKSIDKATDS 209
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K + DF LWK + EP W+SPWG GRPGWHIECSAMSS G DIH GG+DL+FP
Sbjct: 210 EKISDRDFALWKAAKADEPCWQSPWGSGRPGWHIECSAMSSAIFGNQLDIHTGGIDLLFP 269
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENEIAQ +I + N ++H G L++ KMSKS NF+TI + L
Sbjct: 270 HHENEIAQCEAYHQINQWTNYFLHTGHLHIAKEKMSKSLRNFVTIKDYLNLN-------S 322
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA--------- 354
R L++ YR P ++ +AE++ K+ +++
Sbjct: 323 PDQFRTLCLLSKYRSPTEYNSDIFKKAEVVHQKFSSYINDAKAYVDGSINSLIASESEIL 382
Query: 355 -------------LYNDLNTVSAIQALHKLARESTKNHD-------------------LL 382
L +D +T +AI L L + + + +
Sbjct: 383 EKLAMTKSQVRIALADDFDTPTAINYLLNLLSFANVHSNTTTKSKRSYTARSPSVIAAVS 442
Query: 383 PIFNASAHILGI-EVCKEHLNKNISIAIEKLVQERLILL-------KMK-----KFS--- 426
G+ + + ++ +V R + K + +
Sbjct: 443 TYVEKLLSSFGLSRQDDKRYSPLSESVVDSVVGFRSNIRNYALDKLKNRLKLPSDYESSK 502
Query: 427 ---------SADYIRKQLESKGFILE 443
D R L + G I++
Sbjct: 503 NPDCSYLLDLCDNYRNDLLNAGIIVK 528
>gi|195122364|ref|XP_002005681.1| GI18944 [Drosophila mojavensis]
gi|193910749|gb|EDW09616.1| GI18944 [Drosophila mojavensis]
Length = 537
Score = 247 bits (631), Expect = 2e-63, Method: Composition-based stats.
Identities = 141/516 (27%), Positives = 221/516 (42%), Gaps = 86/516 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R +P + Y CGPTVYD H+G+A + D++ R+LR Y +
Sbjct: 27 INIYNHRVRGKVPLVLRNPHMVTWYTCGPTVYDKTHVGHASTYVKVDIIQRILRD-YFKY 85
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ NITD+DDKII R++++ + +F ++ RL P +
Sbjct: 86 NLITAMNITDVDDKIITRSKEQG------RNWQELARTYDAEFKENMLRLNVKPPNMRAH 139
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ +IP + I+ +I + AY A + + FD S NYG +E +
Sbjct: 140 VSANIPVIQRFIEQLIENQQAYVAEDKSVYFDVSKCQNYGKLQNISKEE---WALQENEQ 196
Query: 184 HKKNPADFILWKRST-PMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ ADF LWK EP W S W G GRPGWHIECSA++ + G+ D H GGLDL
Sbjct: 197 GKRSAADFALWKAKKAKYEPSWSSKWGGEGRPGWHIECSAIAGMFFGEELDFHAGGLDLR 256
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + + N W+H G L+L + +KMSKS GN IT++E+L
Sbjct: 257 FPHHENEEAQCCAHFKKNQWVNYWLHTGQLHLLGDQQKMSKSLGNTITVDEML------- 309
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY--- 356
+S+ A R+A L+++Y + ++ Q + A L K+ + +
Sbjct: 310 KSYTADEFRMACLLSNYNNAMPYSDQLMLTARQTLKKFRNFHADLNAYMQFQKAPKFLDR 369
Query: 357 -------------------NDLNTVSAIQALHKLARESTKNHD------------LLPIF 385
+D +T AI L ++ + L +
Sbjct: 370 GALQSQLDHMVLEFDNSLRDDFDTARAISVLMDQMSSISRCINHQSADAEQEPGHCLDLL 429
Query: 386 NASAHI-------LGIEVCKEHLN-------------KNISIAIEKLVQERLILLKM--- 422
A+ + LGI + N ++++ + L+ R L +
Sbjct: 430 LAAGNFIGSSMLNLGISSLADSSNLLSQQQQANSSAQVDVNLLVADLLAIRSQLREQAAE 489
Query: 423 ----KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
KK +D +R L+ G + D+K +
Sbjct: 490 SANVKKLELLELSDRLRNVLQEHGINVRDHKQGSSW 525
>gi|26553474|ref|NP_757408.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
gi|61216349|sp|Q8EX28|SYC_MYCPE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|26453480|dbj|BAC43812.1| cysteinyl-tRNA synthetase [Mycoplasma penetrans HF-2]
Length = 439
Score = 247 bits (631), Expect = 3e-63, Method: Composition-based stats.
Identities = 153/460 (33%), Positives = 221/460 (48%), Gaps = 50/460 (10%)
Query: 5 IKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIY+ + + ++D NI+MYVCGPTVY+ HIGN RP+I FDVL RL
Sbjct: 1 MKIYDFVSKTDKE--VSLDKKNIKMYVCGPTVYNHVHIGNLRPIITFDVLNRLFLELGY- 57
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-Q 122
VT++ NITDIDDKI+ +A++E+ ++S Q+ +
Sbjct: 58 -NVTFIHNITDIDDKIVNKAKEENIGEL------ELSSYYETQYFDILKTINIHTSNMKF 110
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR ++HI + IQ I+ + AY + ++ FDT+ YG S +K+DE +G + +
Sbjct: 111 PRVSDHIKDIENYIQKIVNNKFAYLVDGDVYFDTTKSNQYGKISNKKLDELLVGDKSEDN 170
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K NP DF LWK T + W+ + GRPGWH ECS + + YLG DIHGGG+DL F
Sbjct: 171 LKKNNPQDFALWK-QTTIGLNWDLKFSTGRPGWHTECSCLINKYLGDQIDIHGGGIDLKF 229
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q+ + + A IW+H G LN+ +KMSKS NFI +LL +
Sbjct: 230 PHHENENIQNIAVNN-KDLARIWMHVGHLNINNQKMSKSLSNFILAKDLLS-------EY 281
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG--------------IID 348
+R T Y P++FT + L ++ L D
Sbjct: 282 NTNTVRWFFYQTSYSNPLNFTTENLINSKNQLENIIYNLNIFKSHLIIEQKYNEKNLEFD 341
Query: 349 PAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNA-----SAHILGIEVCK 398
+ L L N+ N + + + + + S KN + L + ILGI
Sbjct: 342 KSNLIELTNNFNLPNIVSFIEEKIKYSSILLRNKNFEELNKLHFNLSYLLTKILGII--- 398
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
H+N AIE L+ + L + K FS +D RK L K
Sbjct: 399 -HVNLFDDEAIE-LLNKWNKLKQEKNFSESDKYRKLLMEK 436
>gi|124002858|ref|ZP_01687710.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
gi|123992086|gb|EAY31473.1| cysteinyl-tRNA synthetase [Microscilla marina ATCC 23134]
Length = 568
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 126/300 (42%), Positives = 166/300 (55%), Gaps = 24/300 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KI NTL F+ ++P + MYVCGPTVY+ HIGNARP + FDVL R L Y
Sbjct: 12 PPLKIQNTLTNTKEVFEPLNPPFVGMYVCGPTVYNNPHIGNARPAVFFDVLSRYLTYLGY 71
Query: 63 EKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
V YVRNITD+ +D+I ++A+ E I + T ++++
Sbjct: 72 --KVRYVRNITDVGHLTGSENDGEDRISKQAKLEQLE------PMEIVNIYTNKYLELMD 123
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI---PNYGSFSRRK 169
L P+ P AT HI + I +Q I+ G AYE+ + FD NYG S R
Sbjct: 124 ALNVKRPSISPTATGHIVEQIDTVQKILDAGLAYESEGSVYFDVKKYNERHNYGELSGRV 183
Query: 170 IDEQKMGTRVPEK--YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
IDE TR + KKNP DF +WK+++P W SPWG G PGWH+ECS MS+ Y
Sbjct: 184 IDELLANTRENLEGQSEKKNPMDFAIWKKASPEHLMRWNSPWGEGFPGWHLECSVMSTKY 243
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
LG+ FDIHGGG+DL+FPHHE EIAQ+ A+ + W+HN L ++G KMSKS
Sbjct: 244 LGEQFDIHGGGMDLMFPHHECEIAQAKAANGGKAPVKYWMHNNMLTIDGVKMSKSPRVKW 303
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 52/399 (13%), Positives = 114/399 (28%), Gaps = 53/399 (13%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I + + + + + + +A+ P+ + + G
Sbjct: 181 GRVIDELLANTRENLEGQSEKKNPMDFAIWKKAS---PEHLMRWNSPWGEGFPGWHLECS 237
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ T + +D K K +
Sbjct: 238 VMSTKYLGEQFDIHGGGMDLMFPHHECEIAQAKAANGGKAPVKYWMHNNMLTIDGVKMSK 297
Query: 213 PGW--HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
E + + G D+ DL P + + E +
Sbjct: 298 SPRVKWSEEALTNLKTGGLPDDLVAKVKDLNQPQKDEFDEKPEKYLGKEAQPHFRQIQEQ 357
Query: 271 LNLEGRKMSKSNGNFITINELLET-KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
+ NFITI E+ + +++ IRL +L HYR IDF+ + L +
Sbjct: 358 A--------QEFVNFITIEEVFTGEHEILAQAYSPMTIRLFILQAHYRSTIDFSNKALLD 409
Query: 330 AEILLSKWPQTSTSKGIID--------------------PAVLSALYNDLNTVSAIQALH 369
A+ K + +++ L ++ +D+NT A+ +
Sbjct: 410 AQKAYKKLMNSLRVLKLMEYPTAAGTLNTKLDQQINGFCDNALRSMNDDMNTAKALAQIF 469
Query: 370 KLARESTK----NHDLLPIFNASAH------------ILGIEVCKEHLNKNISIAIEKLV 413
+ ++ D+ I A+ + G+ K + + + I+ ++
Sbjct: 470 NINKKINHFYTHPQDIATIEKATFDRMKSFFITFIVDVFGLIEEKTNKQEVL---IQGML 526
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ K + D IR + G +++D K +
Sbjct: 527 DLYKDAKENKDYDKVDQIRTTFKESGLLIKDLKTGVDWA 565
>gi|171920807|ref|ZP_02695358.2| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|225550663|ref|ZP_03771612.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|171903571|gb|EDT49860.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|225379817|gb|EEH02179.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 436
Score = 247 bits (630), Expect = 3e-63, Method: Composition-based stats.
Identities = 146/462 (31%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------------ 352
V+R Y++PI F+ + + + E + K +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFG 339
Query: 353 ---SALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
+ +DL+ V + +H ++ KN D+ L ILGI
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436
>gi|186701979|ref|ZP_02971607.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|186700745|gb|EDU19027.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 436
Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats.
Identities = 148/462 (32%), Positives = 224/462 (48%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------IIDPAV 351
V+R Y++PI F+ + + + E + K + ID
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFG 339
Query: 352 L--SALYNDLNTVSAIQALHKLARES------TKNHDLLPI----FNASAHILGIEVCKE 399
L + +DL+ V + +H ++ K+ + L + ILGI
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H +KN+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDKNL-----ALLNTWKNYIDKKDYVKADELRKQLINIGIL 436
>gi|209554323|ref|YP_002284545.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|209541824|gb|ACI60053.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
Length = 436
Score = 247 bits (630), Expect = 4e-63, Method: Composition-based stats.
Identities = 146/462 (31%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------------ 352
V+R Y++PI F+ + + + E + K +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFG 339
Query: 353 ---SALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
+ +DL+ V + +H ++ KN D+ L ILGI
Sbjct: 340 FFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436
>gi|291000007|ref|XP_002682571.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
gi|284096198|gb|EFC49827.1| cysteinyl-tRNA synthetase [Naegleria gruberi]
Length = 668
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 142/541 (26%), Positives = 216/541 (39%), Gaps = 113/541 (20%)
Query: 5 IKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YN+L + +F D + I Y CGPTVYD++H+G+AR + FD++ R+L Y
Sbjct: 29 IEVYNSLTCQKEKFILQDNSNTITWYTCGPTVYDWSHMGHARTYVGFDIVRRILED-YFN 87
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+ NITDIDDKII++ + F +D +L PT
Sbjct: 88 FNVIYIENITDIDDKIIKK------------NFLSVPRYYEHLFWEDMKQLQVKTPTVLV 135
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK--------- 174
R T HI +++ IQ II +G AYE + FD + K++
Sbjct: 136 RVTEHIDEVVSFIQQIIDNGFAYEEGGNVYFDVEAFQQNQKHVYGKLEPWNVNCEERLMD 195
Query: 175 ---MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS-------- 223
+ + KK+ DF LWK S P EP W+S WG+GRPGWHIECSAM+
Sbjct: 196 GEGESETEKKVFKKKSKKDFALWKTSKPGEPEWDSKWGKGRPGWHIECSAMACYALQQAA 255
Query: 224 ----SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
D+H GG+DL FPHH+NE+AQS + N ++H G L+++G MS
Sbjct: 256 KLAGRSANDATLDVHCGGIDLKFPHHDNELAQSEAYLGSRQWVNYFLHTGHLSIDGMSMS 315
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
KS NFITI + LE + A IR+ L + + ++++ + A+ + + +
Sbjct: 316 KSKKNFITIRQALE-------KYTARQIRMMFLYRKFDDEMEYSETTMEYAKSIEKSFQE 368
Query: 340 TSTSKGIIDPAV-------LSALYN----------------------DLNTVSAIQALHK 370
+ II + +T+ + L
Sbjct: 369 FFGNLKIIFRDYVTKTGKSIEKWDQADFELSETLSKSKLDVDTALRNSFDTIKCMITLQS 428
Query: 371 LARESTKNHDLLP------------IFNASAHILGIEV----------CKEHLNKNISIA 408
L + + + + G+ E +N++
Sbjct: 429 LIKATNTYLEKKNYPSVPLLKQVGYYVTRIFSVFGLVDGVDTFGFPVSGGESYEENVAPI 488
Query: 409 IEKL----VQERLILLKMKK------FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRW 457
I L + R I + D +R L G LED K T W
Sbjct: 489 INALSDFRSEIRNIARDKNDKKEQRILQTCDSLRDDVLPGLGIRLEDKK------ETTSW 542
Query: 458 K 458
K
Sbjct: 543 K 543
>gi|260787696|ref|XP_002588888.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
gi|229274059|gb|EEN44899.1| hypothetical protein BRAFLDRAFT_268799 [Branchiostoma floridae]
Length = 512
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 150/525 (28%), Positives = 219/525 (41%), Gaps = 96/525 (18%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+L R+ + S Y CGPTVYD AH+G+A + FD++ R++ ++ V
Sbjct: 2 VYNSLCRRKVPLILPNKSFASWYQCGPTVYDHAHLGHACCYVKFDIIRRIMEDFFNIDLV 61
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V ITDIDDKII +AR+ +N + + +F +D RL PT R T
Sbjct: 62 -MVMGITDIDDKIISKARE------LNMEFTHVAQTFANEFKRDMVRLRVQPPTVYTRVT 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
N++PQ+I +Q II G+AY N + FD YG + K
Sbjct: 115 NYMPQIITFVQKIIDRGYAYPTDNGSVYFDVRK---YGDRYGKLSVPSCFFLSPAVDKEK 171
Query: 186 KNPADFILWKRSTPMEPGWESPW--GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+ DF LWK P EP W SPW G+GRPGWHIECS M+S G DIH GG+DL+FP
Sbjct: 172 RGFRDFALWKAGKPGEPWWTSPWGKGKGRPGWHIECSTMASAIFGDQLDIHTGGIDLMFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRS 301
HHENEIAQ + + AN ++H G L+ + KMSKS N ITI E LE
Sbjct: 232 HHENEIAQCEAHHCVPQWANYFLHAGHLHKTSDKDKMSKSLKNTITIREFLE-------K 284
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------------- 340
+ A R+ LMT YR +++ + EA +
Sbjct: 285 YTANQFRIFCLMTRYRSVVEYCDTMMNEAVSVQRTLTSFLNNADAYIRGQLQCEAIDEAL 344
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLL 382
G A+ +D +T +A++A+ L R + K +
Sbjct: 345 LMEKLGETKDKFRRAISDDFDTRAALEAILHLVRVTNKQLRTGGEVENPVRSPGVIAAIQ 404
Query: 383 PIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERL-----------IL------ 419
+ +LG+E + + ++ LV+ R
Sbjct: 405 AYVDRVLQLLGVEYPGRRVGGATVQQAVMKDVLDSLVKFRNTVRHYALLKGPDAQPNPAG 464
Query: 420 ----------LKMKK--FSSADYIRKQLESKGFILEDYKNPDNGQ 452
K ++ + D IR +L G ++D + Q
Sbjct: 465 EGEVGQGKLQRKEREPLMKACDEIRTELVWAGIQIQDRGRKSSWQ 509
>gi|185178726|ref|ZP_02964542.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188024163|ref|ZP_02996889.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188518554|ref|ZP_03004015.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|225551139|ref|ZP_03772085.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|184209327|gb|EDU06370.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188018795|gb|EDU56835.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|188997891|gb|EDU66988.1| cysteinyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|225378954|gb|EEH01319.1| cysteine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
Length = 436
Score = 246 bits (629), Expect = 4e-63, Method: Composition-based stats.
Identities = 146/462 (31%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------------ 352
V+R Y++PI F+ + + + E + K +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNHQLKSLTQIDHFR 339
Query: 353 ---SALYNDLNTVSAIQALHKLAREST----KNHDL------LPIFNASAHILGIEVCKE 399
+ +DL+ V + +H ++ KN D+ L ILGI
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKKNKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436
>gi|50364902|ref|YP_053327.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
gi|61216193|sp|Q6F230|SYC_MESFL RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|50363458|gb|AAT75443.1| cysteinyl-tRNA synthetase [Mesoplasma florum L1]
Length = 441
Score = 246 bits (628), Expect = 6e-63, Method: Composition-based stats.
Identities = 147/464 (31%), Positives = 222/464 (47%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+++TL ++ + I+ I +Y CGPT+YD+ HIGNARP+I+ D L R L
Sbjct: 1 MKLFDTLTQEQ---KNINKEVINIYSCGPTIYDYIHIGNARPIILMDTLIRFLESEG--I 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +++NITDIDDKIIE+A QE N IT K F+++ L P
Sbjct: 56 KVNFLQNITDIDDKIIEKAIQE------NKTEKEITDKYLSAFLQNLKDLKIRMPDKLIP 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
+ I +M I +++ AY + ++ FD YG S +KI++ G RV +
Sbjct: 110 ISEKISEMNLFIDDLVKLEAAYNVDGDVYFDIQKFSDEYGKLSNKKINDLISGNRVEIED 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
K NP DF +WK+ T ++S +G+GRPGWH EC+ + Y G+ DIH GG+DL F
Sbjct: 170 KKNNPLDFSVWKK-TEKGITFDSNFGKGRPGWHTECALLIDEYFKGETIDIHSGGIDLQF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q E ++IW+HNG L + G KMSKS GN +T+ L ++
Sbjct: 229 PHHENERIQFIAKHGKE-ISDIWVHNGHLTINGEKMSKSLGNTMTLTNFLA-------NY 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ----------------TSTSKGI 346
+ ++R L T+Y++P++ + +A + K T+
Sbjct: 281 NSDILRWIFLTTYYKQPLNINDDLIEQANKFIQKINNLSKKIKQLLIENKFVKTNQFDEE 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVC 397
I + NDLNT + L ++ K L N LG+ +
Sbjct: 341 IIKQFKIHMKNDLNTSRVLTLLEDTLKDINKLSTLKEFDDLFLKINSLNYILKTLGLSI- 399
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
++N +S + L ++ K F AD IRK L SKG +
Sbjct: 400 --NINTFVSDEEQNLFLLWKKIVSEKDFEKADEIRKVLISKGIL 441
>gi|13357680|ref|NP_077954.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170761946|ref|YP_001752206.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508782|ref|ZP_02958248.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|24418701|sp|Q9PR21|SYC_UREPA RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|11271610|pir||H82930 cysteinyl-tRNA synthetase UU123 [imported] - Ureaplasma urealyticum
gi|6899081|gb|AAF30529.1|AE002113_3 cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827523|gb|ACA32785.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675727|gb|EDT87632.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
33697]
Length = 436
Score = 246 bits (627), Expect = 7e-63, Method: Composition-based stats.
Identities = 144/462 (31%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIDKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESAAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNINNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
V+R Y++PI F+ + + + E + K +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFE 339
Query: 350 AVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI----FNASAHILGIEVCKE 399
+ +DL+ V + +H ++ K+ + L + ILGI
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436
>gi|171920288|ref|ZP_02691052.2| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|171902701|gb|EDT48990.1| cysteinyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
27813]
Length = 436
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 144/462 (31%), Positives = 221/462 (47%), Gaps = 51/462 (11%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+Y++ ++ E I+ I +Y CGPTVY+ HIGNARP+I DVLYR L+ +
Sbjct: 1 MKLYDSYSNQLVE---INDELISIYNCGPTVYNHIHIGNARPLITMDVLYRFLKKH--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
YV NITDIDDKII A N ++ +++K L L P+
Sbjct: 56 KTKYVLNITDIDDKIINYALAN------NLKELEVSEYYFNEYLKIKKALNTLEM-INPK 108
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ ++I IQ +I Y +++ FDT NYG S+R ++ +G R+ +
Sbjct: 109 VSTHMDKIIDYIQKLIYKQAGYFIGDDVYFDTKKALNYGQLSKRDLENDIVGMRIESVAN 168
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K NP DFILWK++ W +PWG GRPGWH ECS + + Y+G+ IHGGG+DL FPH
Sbjct: 169 KHNPNDFILWKKTNKGIM-WNTPWGIGRPGWHSECSCLINTYIGEQVSIHGGGIDLKFPH 227
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENE AQ+ + A +W+H G +N+ KMSKS NFI + +LL +
Sbjct: 228 HENENAQNQVLYN-KNLAKVWMHFGLVNVNNEKMSKSLNNFILVKDLLA-------EYDY 279
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------------IIDP 349
V+R Y++PI F+ + + + E + K +
Sbjct: 280 QVVRWFFYQADYKQPIKFSHEIMKQNEKEILKIKNAIYNAKNYLYFNNQLKSLTQIDHFE 339
Query: 350 AVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI----FNASAHILGIEVCKE 399
+ +DL+ V + +H ++ K+ + L + ILGI
Sbjct: 340 LFDERINDDLDFVGIVDLIHISVKKINILIKENKDMNELKLNLTQLLYMLDILGINFVDL 399
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
H ++N+ L+ + K + AD +RKQL + G +
Sbjct: 400 HNDENL-----ALLNTWKNYVDKKDYVKADELRKQLINIGIL 436
>gi|115903770|ref|XP_796899.2| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
purpuratus]
gi|115973007|ref|XP_001191711.1| PREDICTED: similar to MGC88928 protein [Strongylocentrotus
purpuratus]
Length = 523
Score = 245 bits (625), Expect = 1e-62, Method: Composition-based stats.
Identities = 136/529 (25%), Positives = 223/529 (42%), Gaps = 101/529 (19%)
Query: 6 KIYNTLER-------KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
+ N+L K ++ + + CGPTVYD AHIG+A + FD++ R+L
Sbjct: 18 HVLNSLTAAHDRKSAKKEPLLLMNKNVATWFACGPTVYDSAHIGHASSYVRFDIIRRIL- 76
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+ + V V ITDIDDKII R+ +++ + ++F +D L L
Sbjct: 77 AEFFQTSVVMVMGITDIDDKIIRRSHEQNL-----KDFRELAGFYEREFYQDMQHLKVLP 131
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF--DTSSIPNYGSFSRRKIDEQKM 175
T R ++HIP+++ I +II +G+ Y ++ + F D ++ Y + + +D Q
Sbjct: 132 ATVYTRVSDHIPEILTFIDSIIKNGYGYSTSSGSVYFNVDAFTLERYDKLASQDLDVQHD 191
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
+ K++P DF LWK P EP W++PWG+GRPGWHIECSAMS G+ DIH
Sbjct: 192 EGKEFIDPEKRHPRDFALWKGVKPGEPWWDAPWGKGRPGWHIECSAMSKAIFGERLDIHT 251
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFL--NLEGRKMSKSNGNFITINELLE 293
GG DL FPHH NEIAQ + AN ++H+G L + KMSKS N ++I + L
Sbjct: 252 GGRDLAFPHHNNEIAQCEACFNSNQWANYFLHSGHLYRKYDADKMSKSLQNVVSIQDFL- 310
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------- 340
+++ R LM+ Y +++ + +A +L +
Sbjct: 311 ------KTYTPNQFRFLCLMSKYDHDLEYGPDTMQQAVVLHRQMSAFLNDADAYVKGQIC 364
Query: 341 ---------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
V+ AL +D +T A+ + KLA N +
Sbjct: 365 CKPFNEAELMQRLETTREEVIEALADDFDTKRALDCIMKLAHTCNSNFSQVSE------- 417
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS------------------------ 427
+ ++ +++A++ LV R + + ++
Sbjct: 418 ---STQLDQSSQAMTVALDTLVNFRQDVRR---WALTDQEDHGISSVSQSSHGDSDDVRQ 471
Query: 428 ---------------ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
D++R L G ++D + + KQKP
Sbjct: 472 RRRKLMKERAPLLNACDHVRDTLTQNGIQIKDRGATATWEFVE--KQKP 518
>gi|195485861|ref|XP_002091264.1| GE12334 [Drosophila yakuba]
gi|194177365|gb|EDW90976.1| GE12334 [Drosophila yakuba]
Length = 560
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 143/513 (27%), Positives = 225/513 (43%), Gaps = 84/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R+ +P + Y CGPTVYD AH+G+A + D+L R+LR Y+
Sbjct: 48 INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+RA+ + +F +D +RL +
Sbjct: 108 LVT-AMNITDVDDKIIKRAQLAGLD------WQKMARAYEAEFRQDMSRLNVQPADVRSH 160
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T +P +I IQ +I AY + + FD S NYG + ++
Sbjct: 161 VTTTMPVIIQFIQQLIDQKQAYVTPDNSVYFDVSKSQNYGKLENLGL----SKEKLERGS 216
Query: 184 HKKNPADFILWKRSTP-MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP WE+PW G GRPGWHIECSA++ + G+ D H GGLDL
Sbjct: 217 IKRNSADFALWKARKSGSEPTWEAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLDLR 276
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + ++ N W+H G L++ + +KMSKS GN I+++ELL
Sbjct: 277 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL------- 329
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+ + A R+A L+++YR + ++ Q + A L ++
Sbjct: 330 KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFKNFQADLSAYTQFLKPVHLLDE 389
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
+ L +D +T AI L ++ + + +
Sbjct: 390 GALKAQLTYTVTEFDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCIDLL 449
Query: 386 NASAHI-------LGI------EVCKEHLNKNI-----SIAIEKLVQERLILLKM----- 422
A+ + G+ E +E ++ + S+ + ++ R + +
Sbjct: 450 LAAGNFINRVIVTFGLTEFQDREPLQEKVSFSDHGIDPSLLVNDVINVRGRMRERAISGD 509
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ D +R L+ G + D+K +
Sbjct: 510 VKNQQLLAACDELRSLLQQHGIQVRDHKQGSSW 542
>gi|330816203|ref|YP_004359908.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327368596|gb|AEA59952.1| cysteinyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 457
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 145/439 (33%), Positives = 216/439 (49%), Gaps = 39/439 (8%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M I++YNT+ R+ + + P + +YV GPT++D AH+GN RP +VFDVL RLLR +
Sbjct: 1 MNAPIQLYNTITREKSPLRTPVPGRVTLYVGGPTLHDHAHLGNVRPAVVFDVLARLLRLH 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
Y V +V + D+DD+I A +++ T++ + +D L LAP
Sbjct: 61 Y--PDVLHVGRLADVDDRIHAAALAAG------ESVEAFTARYRDAWREDLDALGVLAPD 112
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+PRA+ + ++ ++ GHAY ++F S P +G R +++ R
Sbjct: 113 VEPRASEQVAGVVEQAARLLERGHAYIEAGHVLFHVPSYPGHGRLCGRPVEDMIALARGE 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+++P DF+LWK + P W SPWG GRPGWH +C+++ LG+ DIHGGG DL
Sbjct: 173 PAPRRRHPLDFVLWKPAEHGFPAWPSPWGAGRPGWHAQCTSILERELGREIDIHGGGQDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
I PHHENEIAQ CA+ W+HN FL + +KMSK N +T+ L E
Sbjct: 233 IHPHHENEIAQLACANGRPPN-RTWLHNAFLTVNWQKMSKPLRNVVTLRALRERA----- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGIIDPAVL 352
IRLA+L HYR+P+++ +QRL+ A L++ + D AVL
Sbjct: 287 --SGEAIRLALLSVHYRQPLNWNLQRLSSARRTLTRGYHVLAAARGTRVDTAVEPDEAVL 344
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAHILGIEVCKEHLNKNIS 406
+AL NDLN +A+ L+ L ASA LG+
Sbjct: 345 AALRNDLNVPAALARLNGLLAAVDGAATESARIRAKSRLLASARPLGLLQRAP------E 398
Query: 407 IAIEKLVQE---RLILLKM 422
A+ +L E R +
Sbjct: 399 SALRELGAEAVPRERARRA 417
>gi|284031725|ref|YP_003381656.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Kribbella flavida DSM 17836]
gi|310947189|sp|D2PPT3|MSHC_KRIFD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|283811018|gb|ADB32857.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Kribbella flavida DSM 17836]
Length = 406
Score = 244 bits (623), Expect = 2e-62, Method: Composition-based stats.
Identities = 130/405 (32%), Positives = 199/405 (49%), Gaps = 26/405 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++Y+T + E RMYVCG T YD H+G+A + FD++ RL R
Sbjct: 17 RRLRLYDTASGGLVEVPPGPDGPARMYVCGITPYDATHMGHAATYVTFDLVNRLWRDAGY 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y +NITD+DD ++ERA + + + Q F D T L + P
Sbjct: 77 --TVHYTQNITDVDDPLLERATATGVE------WTDLAEREIQLFRDDMTALRVIPPQEY 128
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV--- 179
IP ++ I + G Y+ + ++ F + P +G S D +
Sbjct: 129 VGVVESIPLVVERIAELQQAGAVYDVDGDLYFAVKADPAFGGISSYDADTMRTLFGERGG 188
Query: 180 -PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
P++ K++P D ++W++ P EP W+SP+GRGRPGWHIECSA++ YLG D+ GGG
Sbjct: 189 DPDREGKRDPLDCLVWQQERPGEPAWDSPFGRGRPGWHIECSAIALQYLGMTIDVQGGGS 248
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHHE +++ CA A ++H + L+G KMSKS GN + + +
Sbjct: 249 DLIFPHHEMSASEAQCATGQHPFARAYVHQAMVGLDGEKMSKSKGNLVLV------SRER 302
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLS 353
IRLA+L HYR +T L +A+ L W T D A+ +
Sbjct: 303 QAGSDPMAIRLALLAHHYRTDWFWTDSELLDAQERLDVWRGAITRGTGPDGPAAVDALRA 362
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASA--HILGIEV 396
AL NDL+T +A+ A+ + A E+ + A A +LGI++
Sbjct: 363 ALTNDLDTTAALAAIDQWA-ETNGDDPEASALVALAVDALLGIKL 406
>gi|194883178|ref|XP_001975680.1| GG22443 [Drosophila erecta]
gi|190658867|gb|EDV56080.1| GG22443 [Drosophila erecta]
Length = 560
Score = 243 bits (621), Expect = 4e-62, Method: Composition-based stats.
Identities = 142/513 (27%), Positives = 222/513 (43%), Gaps = 84/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R+ +P Y CGPTVYD AH+G+A + D+L R+LR Y+
Sbjct: 48 INIYNHGLRQKVPLILRNPQMATWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+RA+ + +F +D RL +
Sbjct: 108 LVT-AMNITDVDDKIIKRAQLAGLD------WQKMARAYEAEFRQDMLRLNVQPADVRSH 160
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T +P +I IQ +I AY + + FD S NYG + E ++
Sbjct: 161 VTTTMPVIIQFIQQLIDEKQAYVTPDNSVYFDVSKSQNYGKLQNIGLSE----EKLERGS 216
Query: 184 HKKNPADFILWKRSTPM-EPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP W +PW G GRPGWHIECSA++ + G+ D H GGLDL
Sbjct: 217 IKRNSADFALWKARKSSGEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDFHAGGLDLR 276
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + E+ N W+H G L++ + +KMSKS GN I+++ELL
Sbjct: 277 FPHHENEEAQCCARYKTEQWVNYWLHTGQLHMVGDHQKMSKSLGNTISVSELL------- 329
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL------- 352
+ + A R+A L+++YR + ++ Q + A L ++ +
Sbjct: 330 KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPIHLLDE 389
Query: 353 ---------------SALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
+ L +D +T AI L ++ + + +
Sbjct: 390 GALKAQLTHTVTELDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCIDLL 449
Query: 386 NASAHI-------LGIEVCKEHLNK-----------NISIAIEKLVQERLILLKM----- 422
A+ + G+ ++ + + S+ + ++ R + +
Sbjct: 450 LAAGNFINRVIVTFGLSELQDRESSQEKVSFSDHGIDPSLLVNDVINVRGRMRESATSGD 509
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ D +R L+ G + D+K +
Sbjct: 510 VKNQQLLAACDELRNLLQQHGIQVRDHKQGSSW 542
>gi|195334248|ref|XP_002033796.1| GM20229 [Drosophila sechellia]
gi|194125766|gb|EDW47809.1| GM20229 [Drosophila sechellia]
Length = 558
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 146/513 (28%), Positives = 224/513 (43%), Gaps = 86/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R+ +P + Y CGPTVYD AH+G+A + D+L R+LR Y+
Sbjct: 48 INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+RA+ + +F +D RL A +
Sbjct: 108 LVT-AMNITDVDDKIIKRAQLAGLD------WQKMARAYEAEFRQDMLRLNVQAADVRSH 160
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T +P +I IQ +I AY + + FD S NYG + E K
Sbjct: 161 VTTTMPVIIQFIQQLIAEKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDK------LDP 214
Query: 184 HKKNPADFILWKRSTP-MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP W +PW G GRPGWHIECSA++ + G+ DIH GGLDL
Sbjct: 215 IKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLDLR 274
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + ++ N W+H G L++ + +KMSKS GN I+++ELL
Sbjct: 275 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHMVGDAQKMSKSLGNTISVSELL------- 327
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+ + A R+A L+++YR + ++ Q + A L ++
Sbjct: 328 KKYTADEFRMACLLSNYRNAMPYSDQLMLTARQTLQRFKNFQADLSAYTQFLKPVHLLDE 387
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
+ L +D +T AI L ++ + + +
Sbjct: 388 GALKAQLTHTVTEFDNCLRDDFDTARAISVLMDQMSSISRCINEQQVDAQEEPAYCIDLL 447
Query: 386 NASAHI-------LGI--EVCKEHLNKNIS---------IAIEKLVQERLILLKM----- 422
A+ + G+ +E L + +S + + ++ R + +
Sbjct: 448 LAAGNFINRGIVTFGLSELQDRESLQEKVSFTDHSIDPNLLVNDVINVRGRMRERATSGN 507
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ D +R L+ G + D+K +
Sbjct: 508 VKNPQLLAACDELRSLLQQHGIQVRDHKQGSSW 540
>gi|19922218|ref|NP_610930.1| CG8257 [Drosophila melanogaster]
gi|7303228|gb|AAF58291.1| CG8257 [Drosophila melanogaster]
gi|16183283|gb|AAL13681.1| GH24360p [Drosophila melanogaster]
gi|220945642|gb|ACL85364.1| CG8257-PA [synthetic construct]
gi|220955498|gb|ACL90292.1| CG8257-PA [synthetic construct]
Length = 558
Score = 243 bits (620), Expect = 5e-62, Method: Composition-based stats.
Identities = 148/513 (28%), Positives = 224/513 (43%), Gaps = 86/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R+ +P + Y CGPTVYD AH+G+A + D+L R+LR Y+
Sbjct: 48 INIYNHGLRQKVPLILRNPQMVTWYTCGPTVYDSAHLGHASTYVKVDILQRILRDYFKIN 107
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII+RA+ + +F +D RL AP +
Sbjct: 108 LVT-AMNITDVDDKIIKRAQLAGLD------WQKMARAYEAEFRQDMLRLNVQAPDVRSH 160
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T +P +I IQ +I AY + + FD S NYG + E K
Sbjct: 161 VTTTMPVIIQFIQQLIDGKQAYVTPDNSVYFDVSKSKNYGKLQNLGLSEDK------LDP 214
Query: 184 HKKNPADFILWKRSTP-MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP W +PW G GRPGWHIECSA++ + G+ DIH GGLDL
Sbjct: 215 IKRNTADFALWKARKSGSEPTWAAPWGGEGRPGWHIECSAIAGLFFGRQLDIHAGGLDLR 274
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + ++ N W+H G L++ + KMSKS GN I+++ELL
Sbjct: 275 FPHHENEEAQCCARYKTDQWVNYWVHTGQLHMVGDREKMSKSLGNTISVSELL------- 327
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+ + A R+A L+++YR + ++ Q + A L ++
Sbjct: 328 KKYTADEFRMACLLSNYRNAMPYSDQLMVTARQTLQRFRNFQADLSAYTQFLKPVHLLDE 387
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
+ L +D +T AI L ++ + + +
Sbjct: 388 GALKAQLTHTVTEFDNCLRDDFDTARAISVLIDQMSSISRCINEQQVDAQEEPAYCIDLL 447
Query: 386 NASAHI-------LGI--EVCKEHLNKNIS---------IAIEKLVQERLILLKM----- 422
A+ + G+ KE L + +S + + ++ R + +
Sbjct: 448 LAAGNFINRAIVTFGLSELQDKESLQEKVSFTDHSIDPNLLVNDVINVRGRMRERATSGN 507
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ D +R L+ G + D+K +
Sbjct: 508 VKNPQLLAACDELRSLLQQHGIQVRDHKQGSSW 540
>gi|303236112|ref|ZP_07322714.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
gi|302483694|gb|EFL46687.1| putative cysteine--tRNA ligase [Prevotella disiens FB035-09AN]
Length = 310
Score = 241 bits (615), Expect = 2e-61, Method: Composition-based stats.
Identities = 116/291 (39%), Positives = 157/291 (53%), Gaps = 24/291 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + IYNTL R+ FQ I N+ MYVCGPTVY H+G+ARP I FD+L+R L++
Sbjct: 1 MQNLVIYNTLHRQKERFQPIAAPNVGMYVCGPTVYGDPHLGHARPSITFDILFRYLQHIG 60
Query: 62 GEKCVTYVRNITDI----------DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
V YVRNITD+ DDKI ++AR E I T ++
Sbjct: 61 Y--KVRYVRNITDVGHLEHDADEGDDKIEKKARLEQLE------PMEIAQFYTNRYHNAM 112
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRR 168
L L+P+ +P AT HI + L++ I+ +G+AYE+N I FD + S R
Sbjct: 113 RMLNVLSPSIEPHATGHIIEQEELVKEIMANGYAYESNGSIYFDVTKYDKDHKYGRLSGR 172
Query: 169 KIDEQKMGTRVPEK-YHKKNPADFILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHY 226
+ + +R K+N DF LWKR+ P W SPW G PGWH EC+AM Y
Sbjct: 173 NLTDMINNSRELAGVSEKRNQVDFALWKRAMPEHIMRWPSPWSDGFPGWHCECTAMGRKY 232
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
LG FDIHGGG+DL+FPHHE EIAQ+ + + W+HN + + G+K
Sbjct: 233 LGNHFDIHGGGMDLVFPHHECEIAQAVASQG-DDMVKYWMHNNMITINGKK 282
>gi|198426695|ref|XP_002130035.1| PREDICTED: similar to cysteinyl-tRNA synthetase 2
(mitochondrial)(putative) [Ciona intestinalis]
Length = 523
Score = 241 bits (614), Expect = 2e-61, Method: Composition-based stats.
Identities = 138/512 (26%), Positives = 206/512 (40%), Gaps = 90/512 (17%)
Query: 5 IKIYNTLE--RKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
IK+ N+ R+ + DP ++ Y CGPTVYD HIG+A I FD + R+L
Sbjct: 28 IKVKNSYGCLRQQKALAPLIVADPKHVTWYACGPTVYDKTHIGHASSYIRFDTIRRILT- 86
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
Y ++ V IT+IDDKII RA +N + +F D L L P
Sbjct: 87 NYFGLTISMVMGITNIDDKIITRAN------LLNKEFLSMAEHYENEFKTDLLNLNILPP 140
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
R + +P+++ I ++ HAY + FD G +
Sbjct: 141 IAYVRVSEIVPELLSFIYRLLEQRHAYVSKQGNVWFDVDQFTKVGKLVPI----HQEWKE 196
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
K+ DF LWK + P EP WE+PWG+GRPGWH+ECS ++S Y GK DIH G
Sbjct: 197 SDSGGEKRCARDFALWKAAKPGEPYWEAPWGKGRPGWHLECSTIASLYFGKQIDIHSGAS 256
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHE+EI QS E+ AN ++H+G L KMSKS GN + ++E L
Sbjct: 257 DLEFPHHESEILQSEAFHCEEQWANYFLHSGLLKFGKSKMSKSLGNVVNVDEAL------ 310
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------------------ 340
+ V+R L T + + +T + + + +
Sbjct: 311 -KRHSPDVLRYLCLSTAWHTNLSYTSKDIKHVKASIQLLKTFLSKCQQYVQGNIETKNFD 369
Query: 341 ----STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HD 380
S V + ND +T ++AL +L K +
Sbjct: 370 SAAIYHSLDTCKSEVYVCMCNDFDTPGVLRALKQLCYSVEKTFGEQIVVENWEPGNHVRN 429
Query: 381 LLPIFNASAHI------LGI--------EVCKEHLNKNISIAIEKLVQERLILLK----- 421
P ++ LG + + K +E+L++ R + K
Sbjct: 430 TKPFVEVMTYVTETFTNLGFQSISAAHTDSNPDITAKGQDDILEELLKFRAKVRKLAMSS 489
Query: 422 MK---K------FSSADYIRKQLESKGFILED 444
K F DY+R +L +KG ++D
Sbjct: 490 NKTSDDGLKQLLFKECDYLRNELSNKGISIKD 521
>gi|262165957|ref|ZP_06033694.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
gi|262025673|gb|EEY44341.1| cysteinyl-tRNA synthetase [Vibrio mimicus VM223]
Length = 372
Score = 240 bits (613), Expect = 3e-61, Method: Composition-based stats.
Identities = 133/385 (34%), Positives = 194/385 (50%), Gaps = 38/385 (9%)
Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSS 158
T + Q+ D L P +PRAT +I ++I L+Q +I G AY N +++F+
Sbjct: 2 TERLIQEMYADFDALNIKRPDVEPRATAYIEEIIALVQRLIERGFAYVADNGDVMFEVGK 61
Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
YG S++ +++ + G RV + K++P DF+LWK S P EP WESPWG GRPGWHIE
Sbjct: 62 YDEYGKLSKQDLEQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIE 121
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
CSAM+S LG FDIHGGG DL FPHHENEIAQSCCA + N W+H+G + ++ KM
Sbjct: 122 CSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDKEKM 180
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
SKS GNF TI ++L + A +R ++ HYR ++++ + L +A L +
Sbjct: 181 SKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLY 233
Query: 339 QTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDL 381
+A+ +D NT A L +ARE + L
Sbjct: 234 NALRGLDRSVPAAGGEEYLSRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASAL 293
Query: 382 LPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ A ++GI + + IE L++ R K +++AD R +L
Sbjct: 294 GSLMRELADVIGILYQEPETFFQGSAEDEEAEQIEALIKLRNDSRAAKDWANADMARDKL 353
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQK 460
G +LED N T W++K
Sbjct: 354 NEMGIVLEDGPN------GTTWRRK 372
>gi|195149692|ref|XP_002015790.1| GL10829 [Drosophila persimilis]
gi|194109637|gb|EDW31680.1| GL10829 [Drosophila persimilis]
Length = 556
Score = 240 bits (612), Expect = 4e-61, Method: Composition-based stats.
Identities = 146/516 (28%), Positives = 227/516 (43%), Gaps = 87/516 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I+IYN R+ +P+ + Y CGPTVYD AH+G+A + D++ R+LR Y+
Sbjct: 47 DIRIYNNGMRRKVPLILRNPNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFNI 106
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT NITD+DDKII +AR + +F +D RL P +
Sbjct: 107 NLVT-AMNITDVDDKIIRKARDSGCD------WLGMARTYEAEFKQDMLRLNVQPPDIRT 159
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T+++P ++ I+ +I HAY + + FD S P+YG R + ++
Sbjct: 160 HVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKLQRLGMSTEE-----KSD 214
Query: 183 YHKKNPADFILWKRSTP-MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+N ADF LWK EP W +PW G GRPGWHIECSA++ + G D H GGLDL
Sbjct: 215 LFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLDL 274
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENE AQ C + ++ N W+H G L + + +KMSKS GN I+I+E+L
Sbjct: 275 RFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEML------ 328
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
+S+ + R+A L+++YR + ++ Q + A L ++
Sbjct: 329 -QSYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRFKNFQADLSAYTQFLKPIRKLD 387
Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPI 384
S+L +D +T + L ++ + L +
Sbjct: 388 EGALKAQIAHMVTEFDSSLRDDFDTARGVSVLIDQMTSISRCINEQQVDAEEEPAYCLDL 447
Query: 385 FNASAH-------ILGI--EVCKEHLNKNIS-----------IAIEKLVQERLILL---- 420
A+ + GI E L++ I + I ++ R L
Sbjct: 448 LTAAGNYINRAMLTFGITKLTETESLSQEIPLPTAGGAVDPALLIADILAIRGKLRREAI 507
Query: 421 --KMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
+ K ++ D +R LE G + D+K +
Sbjct: 508 SGQQKNIPLLAACDELRNLLEQHGIQIRDHKEGSSW 543
>gi|301606905|ref|XP_002933053.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Xenopus (Silurana) tropicalis]
Length = 572
Score = 239 bits (610), Expect = 7e-61, Method: Composition-based stats.
Identities = 140/541 (25%), Positives = 216/541 (39%), Gaps = 124/541 (22%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG-- 62
IK+YN+L R+ DP+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 55 IKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVFGID 114
Query: 63 ---------EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
KII+RA++ +N + + Q F +D T
Sbjct: 115 TVVVMVVTDIDD------------KIIKRAKE------LNISPVALARTYEQDFKQDMTA 156
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDE 172
L L PT R T +IPQ+I I++II +G+AY + + FD SI +
Sbjct: 157 LKVLPPTVYMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFNDSFSD 216
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++ DF LWK S P EP W SPWG+GRPGWHIECS ++S GK D
Sbjct: 217 TAS---ESASQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLD 273
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINE 290
IH GG+DL FPHHENEIAQ + + N ++H G L+L KMSKS N++T+ E
Sbjct: 274 IHTGGIDLAFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYVTVKE 333
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
L +S+ R+ L + Y+ ++++ + +A L
Sbjct: 334 FL-------KSFSPDQFRMFCLRSKYKSAVEYSNGSMHDAVNTLHTISSFVDDAKAYMKG 386
Query: 341 ------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------- 377
V +A +D +T A+ A+ L +
Sbjct: 387 QLICQPVQEALLWQRLNETKVNVKAAFSDDFDTPRAVDAVMDLIHHGNRQLKAVSKESNS 446
Query: 378 ------NHDLLPIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKF 425
++ ILGI + + + + +E+++ R + +
Sbjct: 447 PRSSVVYGAMISYIEQFLEILGISLSQNQVAAEDRHSAVLFNVVEEMISFRSKVR---NY 503
Query: 426 SSA----------------------------------DYIRKQLESKGFILEDYKNPDNG 451
+ A D +R+ L G ++D N
Sbjct: 504 ALAADESPNAIGQEEKQQYKERRRQLLLEREPLLQACDIMRQHLAVYGINVKDRGNTSTW 563
Query: 452 Q 452
+
Sbjct: 564 E 564
>gi|269861043|ref|XP_002650237.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|220066327|gb|EED43813.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 500
Score = 239 bits (610), Expect = 8e-61, Method: Composition-based stats.
Identities = 141/505 (27%), Positives = 222/505 (43%), Gaps = 74/505 (14%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K I +Y+++ +K EF DP+N++MYVCGPTVYD HIG+AR I FD++ ++L Y
Sbjct: 3 NKSILLYDSISKKKIEFIPDDPTNVKMYVCGPTVYDSPHIGHARTYISFDIIRKILE-NY 61
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E VT+V NI + S N ++ ++F D +L P
Sbjct: 62 FEYNVTFVMNI------TDIDDKIIIRSKEKNLDPIQLSQIYEKEFFDDMDKLKVKRPDF 115
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
R T HIPQ+I IQ + +G Y +N + FD ++ ++ +
Sbjct: 116 ITRVTEHIPQIINFIQKLENNGLTYVSNGSVYFDLKKYKKIFKYNVLRLSGIEQHLIDTT 175
Query: 182 -----KYHKKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
KK+ DF LWK E + SPWG GRPGWHIECS MS+H G DIHG
Sbjct: 176 VKSIISTEKKSLDDFALWKNVVNKDELKFHSPWGEGRPGWHIECSVMSTHIFGSKLDIHG 235
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG+DL+FPHHENEIAQ + ++H G LN++GRKMSKS NF+TI+E++
Sbjct: 236 GGIDLMFPHHENEIAQCQGYFN-DTWVKYFLHTGHLNIDGRKMSKSLKNFLTISEII--- 291
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
++ IR+ L H+ P++++ ++L A++ K ++ I
Sbjct: 292 ----NNYSGITIRILFLQHHWNSPMNYSEEQLKRADVTRKKIFNFISTAESIITQQKLNN 347
Query: 348 ----------------------------DPAVLSALYNDLNTVSAIQALHKLARESTK-- 377
+ +++N A + L
Sbjct: 348 INNFQKSNPYIRSMTSVDKELYAVLLNTKQIIDKHFRDNINFSDAFLEITNLITNVNTVI 407
Query: 378 -------NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM-KK----- 424
+++L I GI + ++ L R+ + + +
Sbjct: 408 SDLSTDILYNILTYIKKILDIFGIIEDHQIQDELSEKFANILNNFRMQIRQSLRNKATFK 467
Query: 425 --FSSADYIRKQLESKGFILEDYKN 447
F+ D IR ++++ G+ +ED K+
Sbjct: 468 ELFTICDKIRDEVKTVGYQIEDTKD 492
>gi|156744229|ref|YP_001434358.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
gi|156235557|gb|ABU60340.1| cysteinyl-tRNA synthetase [Roseiflexus castenholzii DSM 13941]
Length = 401
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 139/413 (33%), Positives = 201/413 (48%), Gaps = 39/413 (9%)
Query: 5 IKIYNTLERKI-TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +++TL + D + +YVCG T YD H+G+A ++FDVL R +R+ G
Sbjct: 1 MWLFDTLRGQKAELLIPRDRP-LTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y +N TD+DD + ERA ++ + + T+QFVKD L + P P
Sbjct: 59 -TVRYCQNTTDVDDPLFERAARDGI------PWDELARRETEQFVKDCQALNLIPPDFFP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-----IDEQKMGTR 178
+A+ I MI +I+ ++ GHAY N + FD S+ P YG+ +R +
Sbjct: 112 KASEEIATMIPIIERLVELGHAYVRNGNVYFDVSTEPTYGAMARVDGYEALLALANERGN 171
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
P K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG DIHGGG
Sbjct: 172 NPNDPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQIDIHGGGR 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHH +EI Q+ + W+H G L+G+KMSKS GN + I + L
Sbjct: 232 DLIFPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDF----------TVQRLTEAEILLSKWPQTSTSKGIID 348
+ A +R +L YR+ ++ V+RLT A +
Sbjct: 286 -QQHSADALRWYLLSFPYRDDFEYVRSDVPLAVQQVERLTAALAAQGDSKGEPLNAEPFY 344
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD-------LLPIFNASAHILGI 394
+AL NDL+T A+ + L+ + AH+ G
Sbjct: 345 QTYFAALDNDLDTPKALAQIGALSNAILEAASSGYNVVGAQSALREMAHVFGF 397
>gi|82236042|sp|Q6DJ95|SYCM_XENTR RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|49522960|gb|AAH75287.1| albumin [Xenopus (Silurana) tropicalis]
Length = 572
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 140/541 (25%), Positives = 216/541 (39%), Gaps = 124/541 (22%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG-- 62
IK+YN+L R+ DP+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 55 IKVYNSLTRRKDPLILADPTVATWYSCGPTVYDHAHLGHACSYVRFDIIRRILLKVFGID 114
Query: 63 ---------EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
KII+RA++ +N + + Q F +D T
Sbjct: 115 TVVVMVVTDIDD------------KIIKRAKE------LNISPVALARTYEQDFKQDMTA 156
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDE 172
L L PT R T +IPQ+I I++II +G+AY + + FD SI +
Sbjct: 157 LKVLPPTVYMRVTENIPQIISFIEHIIANGYAYATSQGNVYFDVQSIGERYGKFNDSFSD 216
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++ DF LWK S P EP W SPWG+GRPGWHIECS ++S GK D
Sbjct: 217 TAS---ESASQDKRHIRDFALWKTSKPEEPYWASPWGKGRPGWHIECSTIASSVFGKHLD 273
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINE 290
IH GG+DL FPHHENEIAQ + + N ++H G L+L KMSKS N++T+ E
Sbjct: 274 IHTGGIDLAFPHHENEIAQCEAYHQSTQWGNYFLHTGHLHLKGNEEKMSKSLRNYLTVKE 333
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
L +S+ R+ L + Y+ ++++ + +A L
Sbjct: 334 FL-------KSFSPDQFRMFCLRSKYKSAVEYSNGSMHDAVNTLHTISSFVDDAKAYMKG 386
Query: 341 ------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK----------- 377
V +A +D +T A+ A+ L +
Sbjct: 387 QLICQPVQEALLWQRLNETKVNVKAAFSDDFDTPRAVDAVMDLIHHGNRQLKAVSKESNS 446
Query: 378 ------NHDLLPIFNASAHILGIEVCKEHLNKN------ISIAIEKLVQERLILLKMKKF 425
++ ILGI + + + + +E+++ R + +
Sbjct: 447 PRSSVVYGAMISYIEQFLEILGISLSQNQVAAEDRHSAVLFNVVEEMISFRSKVR---NY 503
Query: 426 SSA----------------------------------DYIRKQLESKGFILEDYKNPDNG 451
+ A D +R+ L G ++D N
Sbjct: 504 ALAADESPNAIGQEEKQQYKERRRQLLLEREPLLQACDIMRQHLAVYGINVKDRGNTSTW 563
Query: 452 Q 452
+
Sbjct: 564 E 564
>gi|148657437|ref|YP_001277642.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
gi|148569547|gb|ABQ91692.1| cysteinyl-tRNA synthetase [Roseiflexus sp. RS-1]
Length = 401
Score = 239 bits (609), Expect = 8e-61, Method: Composition-based stats.
Identities = 139/413 (33%), Positives = 205/413 (49%), Gaps = 39/413 (9%)
Query: 5 IKIYNTLERKI-TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +++TL + D + +YVCG T YD H+G+A ++FDVL R +R+ G
Sbjct: 1 MWLFDTLRGQKAELLIPRDRP-LTLYVCGVTPYDTTHVGHAHTFLIFDVLIRYIRHCGG- 58
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y +N TD+DD + ERA ++ + + T+QFVKD L + P P
Sbjct: 59 -TVRYCQNTTDVDDPLFERAARDGI------PWDELARRETEQFVKDCRALNLIPPDFFP 111
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK-----IDEQKMGTR 178
+A+ I MI +I+ +I GHAY N + +D S+ P YG+ +R +
Sbjct: 112 KASEEIAAMIPIIERLIELGHAYVRNGNVYYDVSTEPTYGAMARVSGYEELLALANERGN 171
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
P K +P DF+LW+RS P EP W SPWGRGRPGWHIEC+AM++ YLG DIHGGG
Sbjct: 172 NPNDPLKDDPLDFVLWQRSRPGEPTWPSPWGRGRPGWHIECTAMATRYLGPQLDIHGGGR 231
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DLIFPHH +EI Q+ + W+H G L+G+KMSKS GN + I + L
Sbjct: 232 DLIFPHHPSEIVQTEPYTGKRPFVHFWVHGGLAWLDGQKMSKSLGNLVFIKDAL------ 285
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI----------ID 348
R A +R +L YR+ ++ + +AE + + ++G
Sbjct: 286 -RQHSADALRWYLLSFPYRDDFEYVRSDVPQAEQKVGQLKAALAAQGDPRGERLNPEPFR 344
Query: 349 PAVLSALYNDLNTVSAIQ-------ALHKLARESTKNHDLLPIFNASAHILGI 394
A +AL +DL+T A+ A+ + A D A++ G
Sbjct: 345 QAYFAALDDDLDTPKALAQISVLSGAILEAASSGYDVSDAQSALRDMANVFGF 397
>gi|312197580|ref|YP_004017641.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia sp. EuI1c]
gi|311228916|gb|ADP81771.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia sp. EuI1c]
Length = 426
Score = 239 bits (609), Expect = 9e-61, Method: Composition-based stats.
Identities = 125/422 (29%), Positives = 201/422 (47%), Gaps = 40/422 (9%)
Query: 6 KIYNTLERKITEFQAIDP-------SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
++++T ++ P ++ +YVCG T YD H+G+A + +D+L R LR
Sbjct: 20 RLFDTSRGRLEPVGPELPAAAGTAGPSVSLYVCGITPYDATHLGHAFTYVTYDLLNRALR 79
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+ V +V N+TD+DD ++ERA ++ + + + T+ F D T L L
Sbjct: 80 DAGYQ--VRFVENVTDVDDPLLERAARDGVD------WTEVAERETELFRTDMTALRVLP 131
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--- 175
P H IP ++ ++ ++ G Y + ++ F ++ P +G S +
Sbjct: 132 PDHYVGVVEAIPLIVEMVTELVAAGATYTLDGDVYFSVAAAPRFGYVSGLDAAAMRALSA 191
Query: 176 -GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
P++ KK+P D LW+ P EP W SP+G GRPGWHIECSA++ YLG V D+
Sbjct: 192 ERGGDPDRRGKKDPLDPPLWRAEQPGEPSWPSPFGPGRPGWHIECSAIARRYLGDVIDVQ 251
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL+FPHHE A + A A ++H G + L+G KMSKS GN +
Sbjct: 252 GGGEDLVFPHHECSSAHAEVATGHNPFARRYVHTGMVGLDGHKMSKSRGNLELV------ 305
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
+ R IRLA+L +R+ ++T L AE L +W D L
Sbjct: 306 SRLRARGVAPAAIRLALLAHSHRDDWEWTEGELAAAEARLGRWRAAVALPAGPDATGLLA 365
Query: 353 ---SALYNDLNTVSAIQALHKLARES--------TKNHDLLPIFNASAHILGIEVCKEHL 401
+A+ +DL+T +A+ A+ + A + T +L + +LG+++ K
Sbjct: 366 EVRAAVASDLDTPTALGAVDRWAATALAGTGGGDTAAPELTRLL--VDALLGVDLGKVET 423
Query: 402 NK 403
N
Sbjct: 424 NG 425
>gi|301117980|ref|XP_002906718.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262108067|gb|EEY66119.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 688
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 122/367 (33%), Positives = 175/367 (47%), Gaps = 50/367 (13%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN++ R T F + + Y+CGPTVYD H+G+ R FD + R+L Y
Sbjct: 35 LRLYNSMTRSKTAFVPMQGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYVRRILED-YFGL 93
Query: 65 CVTYVRNITDIDDKIIERARQEH----------------------------PSIPINDAI 96
V V NITDIDDKII RA + +
Sbjct: 94 EVELVMNITDIDDKIILRASETGWLEANPGKELPKDKDEKAKLVMEWASQQSAEDNMRRT 153
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
++ + F++D L PT R + ++P+++ ++ II +G AYE+N + FDT
Sbjct: 154 RELSKFWEKSFLEDMAALNIKTPTVITRVSEYVPEVVEFVEGIIKNGFAYESNGSVYFDT 213
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKY----------HKKNPADFILWKRSTPMEPGWES 206
++ + K+ + +G K+N +DF LWK+S EP W S
Sbjct: 214 AAFGQSKGKAYGKLLPENVGQSELLAEGEGALSAGQSDKRNASDFALWKKSKSGEPFWPS 273
Query: 207 PWGRGRPGWHIECSAMSSH----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
PWG GRPGWHIECSAM+S G D+H GG+DL FPHH+NEIAQS +
Sbjct: 274 PWGEGRPGWHIECSAMASDALKHLAGGKIDVHSGGIDLRFPHHDNEIAQSEAYFDFSQWV 333
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
N ++H G LN+EG KMSKS NF+ I E L +R L+ Y P+D+
Sbjct: 334 NYFVHTGHLNIEGLKMSKSLKNFVKIQEALMDN-------SPRQLRFLFLLHKYNVPMDY 386
Query: 323 TVQRLTE 329
+ E
Sbjct: 387 NDNSMDE 393
>gi|118617863|ref|YP_906195.1| cysteinyl-tRNA synthetase [Mycobacterium ulcerans Agy99]
gi|310947204|sp|A0PQV5|MSHC_MYCUA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|118569973|gb|ABL04724.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium ulcerans Agy99]
Length = 411
Score = 238 bits (608), Expect = 1e-60, Method: Composition-based stats.
Identities = 119/412 (28%), Positives = 197/412 (47%), Gaps = 33/412 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++Y+T +R++ + MYVCG T YD H+G+A + FD+++RL
Sbjct: 16 EPELRLYDTADRQVRPVAP--GNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV+N+TD+DD + ERA ++ + ++ F +D L L+P
Sbjct: 74 HE--VRYVQNVTDVDDPLFERADRDGVD------WRDLAAQEVALFREDMAALRVLSPHD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRK----IDEQK 174
AT + ++I L++ ++ G AY + ++ + + + +G S + +
Sbjct: 126 YVGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLFE 185
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
P + K + D +LW+ + P EP W SP+G GRPGWHIEC+A++ +G D+
Sbjct: 186 QRGGDPGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGLDVQ 245
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + C ++ A ++H G + +G KMSKS GN + +
Sbjct: 246 GGGSDLIFPHHEFTAAHAECVTGEQRFARHYVHAGMIGWDGHKMSKSRGNLVLV------ 299
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGIIDP 349
+RL +L HYR ++ Q L EA L +W +
Sbjct: 300 SGLRAEGVNPAAVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAAVVA 359
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNA--SAHILGIEV 396
V L +DLNT AI AL A ++ ++ P A +LG+++
Sbjct: 360 RVRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411
>gi|42561475|ref|NP_975926.1| cysteinyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|61216209|sp|Q6MS23|SYC_MYCMS RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|42492974|emb|CAE77568.1| cysteine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|301321346|gb|ADK69989.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
Gladysdale]
Length = 441
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 139/464 (29%), Positives = 216/464 (46%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L + ++ I +Y CGPTVY++ HIGNARP+++ DVL R L+
Sbjct: 1 MQLYNSLSKTKKT---LNKKTINLYCCGPTVYNYIHIGNARPILLVDVLIRYLKSR--SI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII +A + N ++ K T +++D L P
Sbjct: 56 KVNYLQNITDIDDKIILKALEN------NLNELEVSQKYTSAYLEDLKSLNINQPDKIIL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
+ + +MI I+N++ AY + ++ FD Y S K+DE G RV
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRVEIDS 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
K DF LWK+ T + W+S +G GRPGWH EC + Y + DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWDSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q A ++ A+IW+HNG L + KMSKS GN I + + + +
Sbjct: 229 PHHENERIQFI-AKNNKELAHIWLHNGHLQINDEKMSKSLGNVILVRDFI-------KKH 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGI 346
+R L T+Y +P++ + + +A K S +
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKKDLKIKSINSSE 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
+ +DLNT + + L ++ KN + L+ N +LG +
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDLLIKQINKNIVDKNLDNFNLLIGSLNYILDVLGFDNV 400
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ N + L + L+K K+F+ AD IR +L +G +
Sbjct: 401 FNYKFDNKTKE---LFLKWQELVKNKEFNKADLIRNKLIEQGIL 441
>gi|256372010|ref|YP_003109834.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
gi|256008594|gb|ACU54161.1| Cysteine--tRNA ligase [Acidimicrobium ferrooxidans DSM 10331]
Length = 372
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 149/396 (37%), Positives = 214/396 (54%), Gaps = 28/396 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+T +++ + + I++Y CG T YD AH+G+A + FDVL R L + +
Sbjct: 1 MRIYDTQAQRVVDLELRPGEEIKIYTCGITPYDAAHLGHAAVYVTFDVLARHLERH--RQ 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VRN+TD+DD I+ +AR+ + + + QF +D T L P +PR
Sbjct: 59 RARCVRNVTDVDDDILRKARE------LGTNYLDLAAMEIAQFDQDMTALGVRRPAVEPR 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVP 180
AT+ I +++ L+Q+++ GHAYE + + F +S P +GS S D P
Sbjct: 113 ATSAIAEILSLVQDLVDSGHAYEVDGWVYFSVASEPTFGSISHLDRDTMIALARERGGDP 172
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ K +P DF+LW+ S EP WES +G GRPGWHIECSA++ LG V DIHGGG DL
Sbjct: 173 DDPRKHDPLDFVLWQPSLADEPAWESRFGPGRPGWHIECSALAMRELGPVVDIHGGGSDL 232
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHE E AQS E W+H G + L+G KMSKS GN + + ELL +
Sbjct: 233 IFPHHECEAAQSRAITG-EPFVRHWVHVGMVRLDGVKMSKSLGNLVFVRELL-------K 284
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
PA V+RLA+L HYR D+T L EA W T G +D + L NDL+
Sbjct: 285 EVPAAVVRLALLSQHYRTSWDWTGGLLEEARERYGLWRAAGTGDGAVDEVDAA-LDNDLD 343
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
T A++A+ + AR + +A +LG+E+
Sbjct: 344 TPGALEAIDRAARAGRG-------VSEAARMLGVEL 372
>gi|298715268|emb|CBJ27917.1| Cysteinyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 664
Score = 238 bits (607), Expect = 2e-60, Method: Composition-based stats.
Identities = 129/377 (34%), Positives = 176/377 (46%), Gaps = 24/377 (6%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
++NT+ + ++ Y CGPTVYD AH+G+AR + DV+ R+L Y V
Sbjct: 47 VWNTVNGCLEPLPDPSTGMLKWYSCGPTVYDSAHLGHARTYVSLDVIRRVLTD-YFRFDV 105
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
TY ITD+DDKII RAR+ A + ++ +QF++D + L P R T
Sbjct: 106 TYALGITDVDDKIIARARENGLREWPEVA--EMAAEFERQFLEDMSDLGVRPPDALTRVT 163
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY--H 184
+HIP ++ IQ I+ +G YEA + FD + K
Sbjct: 164 DHIPDIVAYIQRILENGMGYEAAGGVYFDVEGMGGAYGKLGVKASSSTTPEEEGGSELRG 223
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ DF LWK + EP WESP+GRGRPGWHIECSAM+ G D+H GG+DL FPH
Sbjct: 224 KRSHKDFALWKTAKADEPSWESPFGRGRPGWHIECSAMTHSLFGPNLDVHSGGVDLKFPH 283
Query: 245 HENEIAQSCCA------------------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
H NEIAQ + WIH G LN+EG KMSKS NF+
Sbjct: 284 HTNEIAQCEAHACGGVAATAAATGDGGVGGERKPWVRHWIHTGHLNIEGLKMSKSLKNFV 343
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
TI E LE G+ A R+ LM Y + F+ R+ EA ++ + + +
Sbjct: 344 TIREYLEGHS-AGQEAAAEDFRMFCLMHKYSSNVTFSEDRMEEASVVRGRLQRFLALADV 402
Query: 347 IDPAVLSALYNDLNTVS 363
A D
Sbjct: 403 TIGAARKNRPADTAVRW 419
>gi|153827601|ref|ZP_01980268.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
gi|149737926|gb|EDM52831.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
Length = 222
Score = 238 bits (606), Expect = 2e-60, Method: Composition-based stats.
Identities = 102/230 (44%), Positives = 141/230 (61%), Gaps = 9/230 (3%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYN+L R+ EF+ I + MYVCG T+YD HIG+ R + FDV+ R LRY +
Sbjct: 1 MLKIYNSLTRQKEEFKPIVAGKVGMYVCGVTIYDLCHIGHGRTFVSFDVVARYLRYLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
T+VRNITDIDDKII+RA + + +T + Q+ D L P +P
Sbjct: 61 L--TFVRNITDIDDKIIKRAAENA------ETCESLTERLIQEMYADFDALNIKRPDVEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT +I ++I L++ +I G AY N +++F+ S YG S++ +++ + G RV +
Sbjct: 113 RATAYIEEIIALVERLIERGFAYVADNGDVMFEVSRYSEYGKLSKQDLEQLQAGARVDIE 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S LG FD
Sbjct: 173 AAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGWHIECSAMNSSILGNHFD 222
>gi|198456470|ref|XP_001360335.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
gi|198135626|gb|EAL24910.2| GA20936 [Drosophila pseudoobscura pseudoobscura]
Length = 556
Score = 237 bits (605), Expect = 3e-60, Method: Composition-based stats.
Identities = 145/516 (28%), Positives = 227/516 (43%), Gaps = 87/516 (16%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I++YN R+ + + + Y CGPTVYD AH+G+A + D++ R+LR Y+
Sbjct: 47 DIRVYNNGMRRKVPLILRNQNMVTWYTCGPTVYDSAHLGHASTYVKVDIIQRILRNYFNI 106
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT NITD+DDKII +AR + +F +D RL P +
Sbjct: 107 NLVT-AMNITDVDDKIIRKARDSGCD------WLGMARTYEAEFKQDMLRLNVQPPDIRT 159
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
T+++P ++ I+ +I HAY + + FD S P+YG R + ++
Sbjct: 160 HVTSNMPAIVQFIEELINDSHAYVTEDNSVYFDVSKYPHYGKLQRLGMSTEE-----KSD 214
Query: 183 YHKKNPADFILWKRSTP-MEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+N ADF LWK EP W +PW G GRPGWHIECSA++ + G D H GGLDL
Sbjct: 215 LFKQNSADFALWKAKKEADEPSWAAPWGGEGRPGWHIECSAIAGFFFGHKLDFHAGGLDL 274
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
FPHHENE AQ C + ++ N W+H G L + + +KMSKS GN I+I+E+L
Sbjct: 275 RFPHHENEEAQCCVRYQTDQWVNYWMHTGQLYIAGDEQKMSKSLGNTISISEML------ 328
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-------- 350
+S+ + R+A L+++YR + ++ Q + A L ++
Sbjct: 329 -QSYTSDEFRMACLLSNYRNAMPYSEQLMLTARQTLQRFKNFQADLSAYTQFLKPIRKLD 387
Query: 351 --------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPI 384
S+L +D +T + L ++ + L +
Sbjct: 388 EGALKAQIAHMVTEFDSSLRDDFDTARGVSVLIDQMTSISRCINEQQVDAEEEPAYCLDL 447
Query: 385 FNASAH-------ILGI--EVCKEHLNKNIS-----------IAIEKLVQERLILL---- 420
A+ + GI E L++ IS + I ++ R L
Sbjct: 448 LTAAGNYINRAMLTFGITKLTETESLSQEISLPTAGGAVDPALLIADILAIRGKLRREAI 507
Query: 421 --KMKK---FSSADYIRKQLESKGFILEDYKNPDNG 451
+ K ++ D +R LE G + D+K +
Sbjct: 508 SGQQKNIPLLAACDELRNLLEQHGIQIRDHKEGSSW 543
>gi|307181000|gb|EFN68774.1| Cysteinyl-tRNA synthetase, mitochondrial [Camponotus floridanus]
Length = 518
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 142/503 (28%), Positives = 217/503 (43%), Gaps = 74/503 (14%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN + + + ++ Y+CGPTVYD AHIG+A I D++ R+L Y +
Sbjct: 39 VYNPITKCKVPLILKTENVLKWYMCGPTVYDSAHIGHAATYIKSDIIRRIL-SNYFNIDI 97
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V ITDIDDKII+ + + ++ +F D +L P R T
Sbjct: 98 LLVMGITDIDDKIIKCSIESGKD------FKTLSKHFETEFYADMNKLNIGEPYLYCRVT 151
Query: 127 NHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
++IPQ+I+ ++ ++ + Y + + FDT+ YG D K K
Sbjct: 152 DYIPQIIHFVEELLTRNYGYITKDGSVYFDTNKYNKYGKLKTSVHDVVKSQH-----PDK 206
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K+ DF LWK + EP W PWG GRPGWHIECSA++S G DIH GG+DL FPHH
Sbjct: 207 KSALDFALWKAAKNNEPSWRCPWGYGRPGWHIECSAIASAVFGNSVDIHSGGIDLAFPHH 266
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPA 304
ENE AQSCC + + N W+H G LNL+ KMSKS N I+I LE + A
Sbjct: 267 ENEEAQSCCYHNVNQWVNYWLHCGHLNLKGDVKMSKSLKNTISIQNYLE-------EYSA 319
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY-------- 356
+R+ L++HYR I+F+ + + A ++ K+
Sbjct: 320 NHLRMLCLLSHYRNDIEFSDEVMQNAVLVTQKFDNFINDCDNYVVGKFETGDIDENLLFT 379
Query: 357 --------------NDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASA 389
+D NT AI A+ L K + + N +
Sbjct: 380 TLYDTRNKVYSALADDFNTSKAIHAIINLIGIGNKMLYQSNITPHSKGISAVAAVSNYVS 439
Query: 390 HILG-IEVCKEHLNKNISIAIEKLVQ--------ERLILLKM--KK---FSSADYIRKQL 435
L + + + ++ + I+ ++ R L+ K D +R L
Sbjct: 440 STLSKLGISRSTMSTAENQQIKDIIDCFLNFRMTIRNRALEQNPKDTILLKECDNVRMNL 499
Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
+ G +++D ++ N WK
Sbjct: 500 STYGIVVKDQQSVTNW----SWK 518
>gi|170694947|ref|ZP_02886096.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
gi|170140045|gb|EDT08224.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
Length = 255
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 108/247 (43%), Positives = 151/247 (61%), Gaps = 13/247 (5%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++IYNTL R F + +RMYVCG TVYD+ H+G+AR M+VFD++ R LR
Sbjct: 1 MES-LRIYNTLARDKQTFVPLQAGVVRMYVCGMTVYDYCHVGHARVMVVFDIVQRWLRTL 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ VTYVRNITDIDDKII RA + + I +T + +D L P
Sbjct: 60 GYQ--VTYVRNITDIDDKIIRRAVENG------ETIKSLTDRFINALHEDADALGIARPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+PRAT+ IPQM+ +I+ + +G+AY+ ++ ++ + YG S + +++ + G RV
Sbjct: 112 IEPRATDFIPQMLGMIETLEANGYAYQASDGDVNYAVRKFAGYGKLSGKSLEDLRAGERV 171
Query: 180 PEKYHKKNPADFILWKRSTPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P DF+LWK+S EP GW+S +GRGRPGWHIECSAM LG+ FDIHGG
Sbjct: 172 AANDAKEDPLDFVLWKQSKEGEPADTGWDSKYGRGRPGWHIECSAMGCALLGERFDIHGG 231
Query: 237 GLDLIFP 243
G DL F
Sbjct: 232 GQDLQFR 238
>gi|145344518|ref|XP_001416778.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577004|gb|ABO95071.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 746
Score = 237 bits (604), Expect = 3e-60, Method: Composition-based stats.
Identities = 153/596 (25%), Positives = 232/596 (38%), Gaps = 158/596 (26%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+ NT + F+ + +++ Y+CGPTVYD AH+G+AR + FDVL R++ Y V
Sbjct: 47 LLNTFTKTKVPFKPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVMM-EYFGYDV 105
Query: 67 TYVRNITDIDDKII------------ERARQEHPSIPINDAIS----------------- 97
+V N+TDIDDKII + AR+ + + ++
Sbjct: 106 RFVMNVTDIDDKIIMRAHTRRAEAVVKAARETGETRLGAETLAVEKLLAEGGKPLGALDS 165
Query: 98 ----------------IITSKNTQQFVKDTTRLACLAPTHQ------------------P 123
I + LA +
Sbjct: 166 ATRTLANAVKAAIGSGIDAEHCCAKDWTIQDGYLTLAHQFEAEFMEDMKSLGVARPDMLT 225
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP----------NYGSFSRRKIDEQ 173
R + ++ ++I IQ II G AYE+N + FD + N +
Sbjct: 226 RVSEYVDKVILYIQVIINKGFAYESNGSVYFDVKAFEAAENHKYGKLNQNAMENITEAMD 285
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
G EK KK DF+LWK S EP W SPWG GRPGWHIECSAM S LG+ DI
Sbjct: 286 GEGALEAEKSEKKCDFDFVLWKMSKDGEPCWSSPWGMGRPGWHIECSAMCSDILGQSVDI 345
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
+GGG+DL FPHHEN++AQS E+ N +IH G L+++G KMSKS NFITI L
Sbjct: 346 NGGGIDLNFPHHENQLAQSEAHYDTEQWVNFFIHTGHLHIDGLKMSKSLKNFITIRAAL- 404
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE------------------------ 329
+ + A IR L+ + +P++ T +
Sbjct: 405 ------KMYSARQIRFLFLLNQWCDPMELTPVAAPDGSGVIGFKQMDLALSIERLFVEFF 458
Query: 330 -----------------AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + + S + AV AL +++NT + + AL L
Sbjct: 459 HSIKGVFRTSGSYHVDKQQTWNERERELSDALDTSQAAVHEALIDNINTPNTLLALQDLV 518
Query: 373 RESTKNH------DLLPIF--------NASAHILGI-------------EVCKEHLNKNI 405
+ + K D+ P+ + LG+ E E + +
Sbjct: 519 KATNKYLAETGSVDVRPLLLERVGKFVTKILNCLGVCLDTGAVGFPESSEGSSEGREETL 578
Query: 406 SIAIEKLVQERLILLK-------MKKFSSA-DYIRK-QLESKGFILEDYKNPDNGQ 452
S ++ + + R + K K+ +A D +R L G L+D + +
Sbjct: 579 SPFLDLMTKFRDDIRKLAQGGASAKELLTACDNLRDVGLPELGVKLDDKEGGALWK 634
>gi|26334827|dbj|BAC31114.1| unnamed protein product [Mus musculus]
gi|148690121|gb|EDL22068.1| mCG11180, isoform CRA_d [Mus musculus]
Length = 335
Score = 237 bits (604), Expect = 4e-60, Method: Composition-based stats.
Identities = 111/288 (38%), Positives = 158/288 (54%), Gaps = 13/288 (4%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + +
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPSATAEPG---DSD 207
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 208 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 267
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINE 290
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI +
Sbjct: 268 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKD 315
>gi|332031259|gb|EGI70793.1| Cysteinyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
Length = 518
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 156/503 (31%), Positives = 228/503 (45%), Gaps = 72/503 (14%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IYN + + + ++ Y+CGPTVYD AHIG+A I D++ R+L Y V
Sbjct: 36 IYNLITKCKVPLILKTQNILKWYICGPTVYDSAHIGHATTYIKSDIIRRILSD-YFNIDV 94
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V ITDIDDKII R+ + ++ +F D +L P + R T
Sbjct: 95 LLVMGITDIDDKIIRRSNESGKD------FKTLSRHFETEFFADMNKLNIREPYLRCRVT 148
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
++IPQ+I I+ +I G Y + + F+TS YG S +D V K
Sbjct: 149 DYIPQIIQFIEKLIAKGDGYVAPDGSVYFNTSKYNKYGKLSTLVLDTVNDQNFV----GK 204
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K+ DF LWK + EP W+SPW GRPGWHIECSA++S G DIH GG+DL FPHH
Sbjct: 205 KSALDFALWKAAKENEPSWKSPWSYGRPGWHIECSAIASTVFGNSIDIHSGGIDLAFPHH 264
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLE-GRKMSKSNGNFITINELLETKKFGGRSWPA 304
ENE AQSCC +++ N W+H G L+L+ KMSKS N I+I + LE ++ A
Sbjct: 265 ENEEAQSCCYHDVDQWVNYWLHCGHLSLKGDVKMSKSLKNTISIQDYLE-------NYSA 317
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------TSKGIIDPAVLSA 354
+R+ L++HYR I+F+ + + A + K G ID +L
Sbjct: 318 NNLRMLCLLSHYRNGIEFSDEVIQTAMSVTKKIDNFINDCDNYVAGKFKTGEIDENLLYT 377
Query: 355 L------------YNDLNTVSAIQALHKLARESTK-------------NHDLLPIFNASA 389
+D +T A+ A+ L K + + N +
Sbjct: 378 TLHDTRSKVYSALADDFDTSKAMHAIINLVGIGNKMFHQDNVTSRSNNVSVVAAVSNYLS 437
Query: 390 HIL---GIEVCKEHLNKN--ISIAIEKLVQERLILLKM------KK---FSSADYIRKQL 435
+IL GI + +N I I+ + R + K D +RK L
Sbjct: 438 NILSKFGISRSTKSTVENRQIEDIIDHFLNFRKTVRIRALEQNPKDTILLKECDNVRKCL 497
Query: 436 ESKGFILEDYKNPDNGQRMTRWK 458
+ G +++D KN ++ WK
Sbjct: 498 YTCGIMVKDQKNDNSS---WSWK 517
>gi|313665040|ref|YP_004046911.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
gi|312949642|gb|ADR24238.1| cysteine--tRNA ligase [Mycoplasma leachii PG50]
Length = 441
Score = 236 bits (603), Expect = 4e-60, Method: Composition-based stats.
Identities = 143/464 (30%), Positives = 219/464 (47%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y++L + ++ I +Y CGPTVY++ HIGNARP+I+ DVL R L+
Sbjct: 1 MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVILVDVLIRYLKSR--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ Y++NITDIDDKII +A N I+ K T+ ++ D L P
Sbjct: 56 KINYLQNITDIDDKIILKALDN------NLTELEISQKYTKAYLNDLESLNINQPDKIIL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
+ + +MI I++++ AYE ++ F+ N Y S K+DE G R+
Sbjct: 110 ISEKMNEMIKFIKDLVDIKAAYELEGDVYFNIKKYQNEYCKLSGYKLDELISGKRIEIDS 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
K DF LWK+ T + W+S +G GRPGWH EC + Y + DIH GG+DL F
Sbjct: 170 KKDYSLDFSLWKK-TEIGIKWDSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q A ++ ANIW+HNG L + KMSKS GN I + + + + +
Sbjct: 229 PHHENERIQFI-AKNNKELANIWLHNGHLQINNEKMSKSLGNVILVKDFI-------KKY 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS----------------TSKGI 346
+R L T+Y +P++ + + +A K S ++
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLEIELINQSE 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
S + +DLNT + + L ++ KN + L+ + +LG
Sbjct: 341 YIDQFNSYMDDDLNTSLVLSLIDSLIKQINKNILDNKFENFNLLISSLSYILDVLGF--- 397
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
K N N +KL + L+K K+F AD IRK L +G +
Sbjct: 398 KNVFNYNFKKETKKLFLKWQQLVKNKEFDKADLIRKDLIEQGIL 441
>gi|183983109|ref|YP_001851400.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
gi|310947198|sp|B2HFY1|MSHC_MYCMM RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|183176435|gb|ACC41545.1| cysteinyl-tRNA synthetase, MshC [Mycobacterium marinum M]
Length = 411
Score = 236 bits (602), Expect = 6e-60, Method: Composition-based stats.
Identities = 119/411 (28%), Positives = 195/411 (47%), Gaps = 33/411 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T +R++ + MYVCG T YD H+G+A + FD+++RL
Sbjct: 17 PELRLYDTADRQVRPVAP--GNTATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N+TD+DD + ERA ++ + ++ F +D L L+P
Sbjct: 75 E--VRYVQNVTDVDDPLFERADRDGVD------WRDLAAQEVALFREDMAALRVLSPHDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRK----IDEQKM 175
AT + ++I L++ ++ G AY + ++ + + + +G S + +
Sbjct: 127 VGATEAVAEIIELVEKLLASGAAYVLDGEHPDVYYRSDATLQFGYESGYDRDTMLGLFEQ 186
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
P + K + D +LW+ + P EP W SP+G GRPGWHIEC+A++ +G D+ G
Sbjct: 187 RGGDPGRPGKNDALDALLWRAARPGEPSWPSPFGPGRPGWHIECAAIALSRVGSGLDVQG 246
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + C + A ++H G + +G KMSKS GN + +
Sbjct: 247 GGSDLIFPHHEFTAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLV------S 300
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGIIDPA 350
+RL +L HYR ++ Q L EA L +W +
Sbjct: 301 GLRAEGVNPAAVRLGLLAGHYRADRFWSQQVLDEAVGRLQRWRAATTLPAGPDAAAVVAR 360
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKN---HDLLPIFNA--SAHILGIEV 396
V L +DLNT AI AL A ++ ++ P A +LG+++
Sbjct: 361 VRQYLADDLNTPKAIAALDGWATDALDYGGHDEVAPRLVASTIDALLGVDL 411
>gi|194246729|ref|YP_002004368.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
gi|193807086|emb|CAP18522.1| Cysteinyl-tRNA synthetase [Candidatus Phytoplasma mali]
Length = 438
Score = 236 bits (601), Expect = 7e-60, Method: Composition-based stats.
Identities = 145/459 (31%), Positives = 211/459 (45%), Gaps = 42/459 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KIYNTL RK F+ + + I MYVCGPTVYD H+GNARP+I F++L + L+ +
Sbjct: 1 MLKIYNTLTRKKEIFKPLYSNIINMYVCGPTVYDNIHLGNARPLIFFNMLKKYLQNLNFQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y NI + +I I++K F+ +L + P
Sbjct: 61 --VNYAVNI------TDIDDKIIKIAIEQKTTEKFISTKYINCFLNILKQLEIENIDYFP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ T+ IP +I I+ +I G+AY + + F I NYG + I++ K R
Sbjct: 113 QVTDFIPSIISYIEKLIFKGYAYINDQGVYFRVGLISNYGQLGSKIIEDLKKNNRKEFDS 172
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+N DFILWK++ ++SPW GRPGWH EC M DIHGGG DL FP
Sbjct: 173 QKENHQDFILWKKTK-FGIKYQSPWFEGRPGWHTECVVMIKKIFNVTLDIHGGGNDLKFP 231
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HHENE+AQS D +N +IH G ++ + KMSKS GN I + +LL + +
Sbjct: 232 HHENELAQSIAYDGN-NLSNFFIHIGRIDYQQVKMSKSLGNVIWVKDLL-------KKFH 283
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------D 348
VI+L +L +YR+PI+F + + K I
Sbjct: 284 PNVIKLLILSHYYRQPINFHDSLMEQFVAKYEKINNLLQKNNFILKINNIFSNQLEISMI 343
Query: 349 PAVLSALYNDLNTVSAIQALHKLAR--ESTKNHDLLP----IFNASAHILGIEVCKEHLN 402
+ +DLNT + + + K + N D L +ILGI++ + +
Sbjct: 344 KEFYEYMNDDLNTPNVVSLIEKGLKIFHQNINFDRLSQIQNTLIFILNILGIKIFLKPVT 403
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
K I ++ K + F +DY RK L GFI
Sbjct: 404 K----EIIEIYHLWQKEFKCRNFEKSDYYRKILIDLGFI 438
>gi|83319731|ref|YP_424102.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|109894910|sp|Q2ST11|SYC_MYCCT RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|83283617|gb|ABC01549.1| cysteinyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 441
Score = 236 bits (601), Expect = 8e-60, Method: Composition-based stats.
Identities = 140/464 (30%), Positives = 221/464 (47%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y++L + ++ I +Y CGPTVY++ HIGNARP+I+ DVL R L+
Sbjct: 1 MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVILVDVLTRYLKSR--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ Y++NITDIDDKII +A N I+ K T+ +++D L P
Sbjct: 56 KINYLQNITDIDDKIILKALDN------NLTELEISQKYTKAYLEDLESLNINQPDKIIL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKY 183
+ + +M+ I++++ AYE + ++ FD N Y S K+DE G R+
Sbjct: 110 ISEKMNEMVKFIKDLVDIKAAYELDGDVYFDIKKYQNEYCKLSGYKLDELISGKRIEIDS 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
KK DF LWK+ T + W+S +G GRPGWH EC + Y + DIH GG+DL F
Sbjct: 170 KKKYSLDFSLWKK-TQIGIKWDSFFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q A ++ A+IW+HNG L + KMSKS GN I + + + +
Sbjct: 229 PHHENERIQFI-AKNNKELADIWLHNGHLQINDEKMSKSLGNVILVKDFI-------KKH 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGI 346
+R L T+Y +P++ + + +A K + +
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKISLIKQSK 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
+ + +DLNT + + L ++ KN + L+ + +LG
Sbjct: 341 YIDQFNNYMDDDLNTSLVLSLIDSLIKQINKNILDNISDNFNLLISSLSYILDVLGF--- 397
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
K+ N I++L + L+K K+F AD IRK L +G +
Sbjct: 398 KDVFNYKFKKEIKELFLKWQQLVKDKEFDKADLIRKDLIEQGIL 441
>gi|26344287|dbj|BAC35800.1| unnamed protein product [Mus musculus]
gi|148690123|gb|EDL22070.1| mCG11180, isoform CRA_f [Mus musculus]
Length = 392
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 113/289 (39%), Positives = 162/289 (56%), Gaps = 13/289 (4%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + + ++ T P
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGD---KYGKLVNTVPSATAEPGDSD 207
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++ +DF LWK + P E W SPWG GRPGWHIECS M+S G DIH GG+DL FPH
Sbjct: 208 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMASEVFGSHLDIHTGGIDLAFPH 267
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINEL 291
HENEIAQS + ++ N ++H+G L+++ KMSKS N+ITI +
Sbjct: 268 HENEIAQSEVFHQCQQWGNYFLHSGHLHVKGTEEKMSKSLKNYITIKDC 316
>gi|261211911|ref|ZP_05926198.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
gi|260839261|gb|EEX65893.1| cysteinyl-tRNA synthetase [Vibrio sp. RC341]
Length = 364
Score = 235 bits (600), Expect = 1e-59, Method: Composition-based stats.
Identities = 131/378 (34%), Positives = 190/378 (50%), Gaps = 38/378 (10%)
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSF 165
D L P +PRAT +I ++I L++ +I G AY N +++F+ YG
Sbjct: 1 MYADFDALNIKRPDVEPRATAYIEEIIALVERLIERGFAYVADNGDVMFEVGKYDEYGKL 60
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
S++ +D+ + G RV + K++P DF+LWK S P EP WESPWG GRPGWHIECSAM+S
Sbjct: 61 SKQDLDQLQAGARVDVEAAKRSPLDFVLWKMSKPGEPTWESPWGAGRPGWHIECSAMNSS 120
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
LG FDIHGGG DL FPHHENEIAQSCCA + N W+H+G + ++ KMSKS GNF
Sbjct: 121 ILGNHFDIHGGGSDLQFPHHENEIAQSCCAHGTQ-YVNTWMHSGMVMVDKEKMSKSLGNF 179
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
TI ++L + A +R ++ HYR ++++ + L +A L +
Sbjct: 180 FTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYNALRGLD 232
Query: 346 ---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNAS 388
+A+ +D NT A L +ARE + L +
Sbjct: 233 RSVPAAGGEEYLSRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDLTNASALGSLMREL 292
Query: 389 AHILGIE------VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
A ++GI + + IE L++ R K +++AD R +L G +L
Sbjct: 293 ADVIGILHQEPESFFQGSAEDEDAEQIEALIKLRNDSRAAKDWANADMARDKLNEMGIVL 352
Query: 443 EDYKNPDNGQRMTRWKQK 460
ED N T W++K
Sbjct: 353 EDGPN------GTTWRRK 364
>gi|296269905|ref|YP_003652537.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Thermobispora bispora DSM 43833]
gi|310947224|sp|D6Y1N8|MSHC_THEBD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|296092692|gb|ADG88644.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Thermobispora bispora DSM 43833]
Length = 403
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 123/400 (30%), Positives = 189/400 (47%), Gaps = 27/400 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T R++ E + RMYVCG T YD H+G+A + FD++ R R +
Sbjct: 19 LRLYDTATREVRETEP--SGKARMYVCGITPYDATHLGHANTYLAFDLVNRAWRDAGHD- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y +N TD+DD ++ERA+ + + + F D L L P
Sbjct: 76 -VHYTQNTTDVDDPLLERAQAIGVD------WRELADREIELFRTDMEALRILPPRDYVA 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
T I + +I ++ G Y +++ F ++ P +G+ S + +
Sbjct: 129 VTEVIDDIAEVIVRLMERGATYRIGDDVYFSVAAAPKFGAISGYDEETMRRLFAERGGDP 188
Query: 184 ---HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K+NP D++LW+ P EP WESP+GRGRPGWH+EC+A++ +LG FD+ GGG DL
Sbjct: 189 GRAGKRNPLDWLLWRGERPGEPSWESPFGRGRPGWHVECTAIALRHLGPGFDVSGGGSDL 248
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHE + A A ++H G + EG KMSKS GN + ++EL
Sbjct: 249 IFPHHEMGACEGHVATGEWPFARAYVHAGMVAYEGEKMSKSRGNLVFVSELRHEA----- 303
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSAL 355
IRLA+L HYR ++T RLTEAE L++W D V +
Sbjct: 304 --DPMAIRLALLARHYRSDWEWTPDRLTEAEARLARWRAAVARPAGPDGAALLARVRERI 361
Query: 356 YNDLNTVSAIQALHKLARESTKNHDLLPIFNAS-AHILGI 394
+DL+ A+ + A + + +LG+
Sbjct: 362 ADDLDAPGALALIDAWAAADGDDASAPGLVRDMVDALLGV 401
>gi|226306683|ref|YP_002766643.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase MshC [Rhodococcus erythropolis PR4]
gi|310947210|sp|C0ZZW9|MSHC_RHOE4 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|226185800|dbj|BAH33904.1| probable cysteine--1D-myo-inosityl
2-amino-2-deoxy-alpha-D-glucopyranoside ligase MshC
[Rhodococcus erythropolis PR4]
Length = 413
Score = 234 bits (598), Expect = 2e-59, Method: Composition-based stats.
Identities = 119/412 (28%), Positives = 190/412 (46%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T +R++ MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 PPLRLYDTADRQVRPVTP--GKKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD + ERA ++ + ++ + T F +D L L P
Sbjct: 75 D--VHYVQNVTDVDDPLFERANRDG------EDWIVLGIRETALFREDMEALRVLPPKDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A + +++ L++ + G AY ++ D + + +
Sbjct: 127 IGAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K+NP D ++W+ P EP W SP+G GRPGWHIEC+A++ + +G FD+
Sbjct: 187 ERGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFV------ 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
K G IRL +L HYR+ +T Q L +A+ L W + +
Sbjct: 301 SKLRGEGVDPAAIRLGLLSGHYRQDRAWTDQVLEDAQSRLKVWREAAALDSAPSATDTVA 360
Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGIEV 396
L +DL+T A+ AL AR + + +A +LGI +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAIEGGGSDTQAPGEFADAVDALLGISL 412
>gi|330805509|ref|XP_003290724.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
gi|325079146|gb|EGC32761.1| hypothetical protein DICPUDRAFT_155256 [Dictyostelium purpureum]
Length = 638
Score = 234 bits (597), Expect = 2e-59, Method: Composition-based stats.
Identities = 140/530 (26%), Positives = 221/530 (41%), Gaps = 90/530 (16%)
Query: 2 KKKIKIYNTLERKITEFQ--AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
+ ++ + N+L T F D I Y CGPTVYD +H+G+AR I FD+L R++R
Sbjct: 30 ETELVVNNSLTGGKTPFVFSNKDGKTITWYACGPTVYDASHMGHARTYISFDILRRVMRD 89
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
Y + +V N + S N + S ++ K F +D L L P
Sbjct: 90 -YLGFNIRFVMN------ITDIDDKIIIRSKEQNISHSDLSKKWESSFFEDMKALNVLPP 142
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP--------NYGSFSRRKID 171
R T ++PQ++ +Q II +G AYE+ + FDT S S +
Sbjct: 143 DALTRVTEYVPQIVDYVQKIIDNGFAYESEGSVYFDTQSFIKSHDYGKLEPNSVGNENLA 202
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ G K++P DF LWK+S EP W SPWG GRPGWHIECSAM+S LG
Sbjct: 203 AEGEGALSVGISDKRSPFDFALWKKSKEGEPVWSSPWGEGRPGWHIECSAMASDILGDNI 262
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DIH GG DL FPHH+NE+AQS ++ N +IH+G L ++G KMSKS NFITI E
Sbjct: 263 DIHSGGSDLKFPHHDNELAQSEAYFGNKQWINYFIHSGHLLIDGLKMSKSLKNFITIKEA 322
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL------------------------ 327
LE + + +R+ ++ Y + ++++ + +
Sbjct: 323 LE-------KYTSRQMRMFFILHKYDKAMNYSSESMGYAIEMEKTFVEFFHTVKQLIRDS 375
Query: 328 --TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------- 378
+ + + V L ++ NT A++AL +L ++
Sbjct: 376 PLSNPQFWENAEKDLEKYLQHTKAEVHRFLMDNFNTSDALKALSELVSKTNVYLRDCNAQ 435
Query: 379 ---------HDLLPIFNASAHILGIEVCKEH-------LNKNISIAI----EKLVQERLI 418
+ ++ G+ + + N+ + + + + R
Sbjct: 436 KKNPRINLVQTVAEYVTYIFNVFGLVDNSSNSIGFGSGVKGNLEEEMTPILDAITKFRSE 495
Query: 419 LLK---MKK----FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWKQK 460
+ K + D +R + L G ++D G WK +
Sbjct: 496 VRSSAIAKDTASILKTCDTLRDEILPLLGIKMDDK-----GANGAIWKFE 540
>gi|269126521|ref|YP_003299891.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Thermomonospora curvata DSM 43183]
gi|310947225|sp|D1A2Q5|MSHC_THECD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|268311479|gb|ACY97853.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Thermomonospora curvata DSM 43183]
Length = 414
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 124/380 (32%), Positives = 188/380 (49%), Gaps = 25/380 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T + + RMYVCG T YD H+G+A + FD++ R+ R G
Sbjct: 24 LHLHDTATGTVRPTRP--GPTARMYVCGITPYDATHLGHAATYLAFDLVNRVWRD--GGH 79
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TD+DD ++ERA Q + + F D T L L P H
Sbjct: 80 KVCYVQNVTDVDDPLLERAEQTGQD------WRELADREIALFRDDMTALRILPPDHYVG 133
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR----RKIDEQKMGTRVP 180
A IP ++ +I+ + G YE N ++ F S+ P++G S + + P
Sbjct: 134 AVEAIPLIVEMIERLRSRGAVYEVNGDLYFPISADPDFGRVSGLTTEQMLPLFAERGGDP 193
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ KK+P D +LW+ P EP WESP+G GRPGWH+ECSA+S H+LG FD+ GGG DL
Sbjct: 194 QRRGKKDPLDALLWRAQRPGEPSWESPFGPGRPGWHVECSAISIHHLGMAFDVEGGGSDL 253
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHE + + A A ++H G + L+G+KMSKS GN + ++ L
Sbjct: 254 AFPHHEMSASHAQVATGRHPHAKAYVHTGMVGLDGQKMSKSLGNLVFVSRLRAD------ 307
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAVLSAL 355
+RLA+L HYR ++T + L A L +W + V L
Sbjct: 308 GADPMAVRLALLAHHYRSDWEWTGEDLPRATARLERWRAAVQLPAGPPAAAVAAEVRRHL 367
Query: 356 YNDLNTVSAIQALHKLARES 375
DL+ SA+ + + A ++
Sbjct: 368 SQDLDAPSALVTVDRWAEQA 387
>gi|229494883|ref|ZP_04388636.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rhodococcus erythropolis SK121]
gi|229318241|gb|EEN84109.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rhodococcus erythropolis SK121]
Length = 413
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 120/412 (29%), Positives = 192/412 (46%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T +R++ MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 PPLRLYDTADRQVRPVTP--GEKATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD + ERA ++ + ++ + T F +D L L P
Sbjct: 75 D--VHYVQNVTDVDDPLFERANRDG------EDWIVLGMRETALFREDMEALRVLPPKDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A + +++ L++ + G AY ++ D + + +
Sbjct: 127 IGAVESVNEVVELVEKFVASGAAYIVDDAEFPDVYFRADATEQFGYESGYDRATMEKFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K+NP D ++W+ P EP W SP+G GRPGWHIEC+A++ + +G FD+
Sbjct: 187 ERGGDPDRVGKRNPLDALVWRAERPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDVQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFV------ 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDP 349
K G IRL +L HYR+ +T Q L +A+ L W + + S
Sbjct: 301 SKLRGEGVDPAAIRLGLLSGHYRQDRAWTDQVLADAQSRLKVWREAAALGSAPSATDTVA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGIEV 396
+ L +DL+T A+ AL AR + + +A +LGI +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAIEGGGSDTQAPGEFADAVDALLGISL 412
>gi|331703852|ref|YP_004400539.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
95010]
gi|328802407|emb|CBW54562.1| Cysteinyl tRNA synthetase [Mycoplasma mycoides subsp. capri LC str.
95010]
Length = 441
Score = 234 bits (596), Expect = 3e-59, Method: Composition-based stats.
Identities = 135/464 (29%), Positives = 213/464 (45%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y++L + ++ I +Y CGPTVY++ HIGNARP+++ DVL R L+
Sbjct: 1 MQLYDSLSKTKKT---LNKKTINLYCCGPTVYNYIHIGNARPVLLVDVLIRYLKSR--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII +A N ++ K T +++D L P
Sbjct: 56 KVNYLQNITDIDDKIILKALDN------NLNELEVSQKYTNAYLEDLKSLNINQPDKIIL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
+ + +MI I+N++ AY + ++ F+ Y S K+DE G RV
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFNIKKYENEYCKLSGYKLDELISGKRVEIDS 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
K DF LWK+ T + W S +G GRPGWH EC + Y + DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWNSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q A ++ A+IW+HNG L + KMSKS GN I + + + +
Sbjct: 229 PHHENERIQFI-AKNNKELAHIWLHNGHLQINDEKMSKSLGNVILVRDFI-------KQH 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGI 346
+R L T+Y +P++ + +A K S +
Sbjct: 281 NKNTLRWIFLTTNYTQPLNIRDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIKSINSSE 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
+ +DLNT + + L ++ K+ + L+ + +LG +
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDSLIKQINKDIVDKNLDNFNLLIGSLDYILDVLGFDNV 400
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ N + L + L+K K+F+ AD IR +L +G +
Sbjct: 401 FNYKFDNKTKE---LFLKWQELVKNKEFNKADIIRNKLIEQGIL 441
>gi|15384254|gb|AAK96213.1|AF405551_1 cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 406
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 130/424 (30%), Positives = 197/424 (46%), Gaps = 50/424 (11%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
+M DIH GG DL+FPHHENE Q+ CA +E A W+HNGF+N+
Sbjct: 171 SMVFETLALTDTPYQIDIHAGGADLVFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINN 229
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
KMSKS GN I + L +++ ++R +L HYR ++F + L ++ L
Sbjct: 230 EKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNFNEEDLLMSKKRLD 282
Query: 336 KWPQTSTS--------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD------- 380
K + +L + +DLN A+ L + + + D
Sbjct: 283 KIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLENMLSSTNEKLDQNPKNKA 342
Query: 381 ----LLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADY 430
+L +LGI +++ IE ++ER K F AD
Sbjct: 343 LKGEILANLKFVEELLGIGFKDPSAYFQLGVSESEKQEIENKIEERKRAKAQKDFLKADS 402
Query: 431 IRKQ 434
IR++
Sbjct: 403 IREE 406
>gi|315443963|ref|YP_004076842.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
gi|315262266|gb|ADT99007.1| cysteinyl-tRNA synthetase [Mycobacterium sp. Spyr1]
Length = 412
Score = 233 bits (595), Expect = 4e-59, Method: Composition-based stats.
Identities = 112/390 (28%), Positives = 182/390 (46%), Gaps = 29/390 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++++ +R+I + MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 PQLRLFDSADRQIRPVSP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+NITD+DD + ERA ++ + + T F +D L + P
Sbjct: 75 D--VHYVQNITDVDDPLFERAARDGIG------WRELGDRETDLFREDMAALRVVPPRDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT I ++I +++ ++ G AY ++ D + +
Sbjct: 127 VAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYESGYDRETMLALFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K +P D +LW+ P EP W SP+G GRPGWH+EC+A++ +G V DI
Sbjct: 187 ERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNVLDIQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + C + A ++H G + +G KMSKS GN + +++L
Sbjct: 247 GGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL--- 303
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
IRL + HYR+ ++ L EA+ L +W + G D +
Sbjct: 304 ---RRDGVDPGAIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDATDVVA 360
Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNH 379
L +DL+T A+ A+ A ++
Sbjct: 361 RVRRYLADDLDTPKALAAIDGWAEDTLSYG 390
>gi|254796714|ref|YP_003081550.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
gi|254589939|gb|ACT69301.1| cysteinyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
Length = 484
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 146/320 (45%), Positives = 190/320 (59%), Gaps = 16/320 (5%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCGPTVYD HIGN R IV+D++YR+L + V YVRNITD+DDKII A +
Sbjct: 1 MYVCGPTVYDVPHIGNIRASIVYDIVYRVLLKLF--PEVVYVRNITDVDDKIITSASAQG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
I + + F + L CL+PT +P+AT I +MI +IQ +I G+AY
Sbjct: 59 V------RCDEIALRYERIFHEHLDLLNCLSPTVEPKATQSIGRMISMIQALIDRGNAYS 112
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ FD S YG S+RK ++ G RV E +KK+P DF+LWK + W SP
Sbjct: 113 VAGNVYFDVGSFAEYGVLSKRKKEQLVYGVRVEEDVNKKHPGDFVLWK--SDDHVYWPSP 170
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG+GRPGWHIECSAM+ LG FDIHGGG DL FPHHENE AQS CA+ K A WIH
Sbjct: 171 WGKGRPGWHIECSAMTLATLGADFDIHGGGADLKFPHHENERAQSMCANPGSKFARYWIH 230
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
NGFL ++G KMSKS GN + ++ L+E+ VIR ++ THY +P+D+ +
Sbjct: 231 NGFLTVKGEKMSKSLGNVVNVDTLVES------GVTPNVIRFVLISTHYSKPLDWNDAMV 284
Query: 328 TEAEILLSKWPQTSTSKGII 347
EA L K+ G++
Sbjct: 285 GEAVNSLMKFKLALLDSGVL 304
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 27/118 (22%), Positives = 45/118 (38%), Gaps = 6/118 (5%)
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNAS 388
K+ I + +D NT AI LH L+ + +K ++L +
Sbjct: 359 FDKFESFGDDCSIYTREFFECMADDFNTPGAIAVLHGLSDKVRLIGTSKVNNLAYLLYNL 418
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
LGI++ + I +Q R + K F AD IR L G ++ D++
Sbjct: 419 LIFLGIDLGVRQ-SSVSEDFIRSQLQRRADCKRQKNFVEADEIRSVLAQMGVLIRDHR 475
>gi|312139693|ref|YP_004007029.1| mycothiol ligase mshc [Rhodococcus equi 103S]
gi|325676858|ref|ZP_08156531.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|311889032|emb|CBH48345.1| mycothiol ligase MshC [Rhodococcus equi 103S]
gi|325552406|gb|EGD22095.1| cysteine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 413
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 122/412 (29%), Positives = 196/412 (47%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T +R++ + +MYVCG T YD H+G+A + FD++ R+LR
Sbjct: 17 PALRLYDTADRQVRPVTP--GATAKMYVCGITPYDATHLGHAATYLTFDLVNRVLRDAG- 73
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD + ERA ++ + ++ + T F +D L L P
Sbjct: 74 -HAVHYVQNVTDVDDPLFERADRDG------EDWVVLGMRETALFREDMEALRVLPPQDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I +++ L++ + G AY ++ D + + + +
Sbjct: 127 IGAVESIGEVVELVEKFVASGAAYVVDDPEYPDVYFRADATAQFGYESGYDRATMDHFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D ++W+ P EP W SP+G GRPGWHIEC+A++ + +G FDI
Sbjct: 187 ERGGDPNRPGKRDPLDALVWRAQRPGEPSWPSPFGPGRPGWHIECAAIALNRIGSGFDIQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A ++ A ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLIFPHHEFSAAHAESATGTDRFARHYVHTGMIGLDGEKMSKSRGNLVFV------ 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDP 349
K G IRL +L HYR +T Q L +A+ L+ W + + S
Sbjct: 301 SKLRGEGVDPAAIRLGLLSGHYRVDRPWTDQVLADAQERLALWRKAAALESAPSAEDTVA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLAREST-----KNHDLLPIFNASAHILGIEV 396
+ L +DL+T A+ AL AR + +A +LG+E+
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRAVDHGGPDAGAPGAFADAVDALLGVEL 412
>gi|86741333|ref|YP_481733.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
gi|123723762|sp|Q2J9N8|MSHC_FRASC RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|86568195|gb|ABD12004.1| cysteinyl-tRNA synthetase [Frankia sp. CcI3]
Length = 464
Score = 233 bits (594), Expect = 4e-59, Method: Composition-based stats.
Identities = 119/379 (31%), Positives = 183/379 (48%), Gaps = 25/379 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K ++I++T + E R+YVCG T YD H+G+A + +D+ R+LR
Sbjct: 41 KPLRIFDTATSSVRELAPAV--TARLYVCGITPYDATHLGHAFTYLTYDLAQRVLRDAG- 97
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD ++ERA ++ + + F +D T L LAP
Sbjct: 98 -HHVHYVQNVTDVDDPLLERATRDGLD------WRALADREIDLFREDMTALRMLAPDAY 150
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
IP ++ ++ ++ G AY+ ++++ F ++ P +G S E
Sbjct: 151 VGVVEAIPMIVDMVVELVDRGAAYQVDDDLYFSIATAPAFGEISHLSRAEMLAICAERGG 210
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
P + KK+P D +LW+ P EP W SP+G GRPGWHIECSA++ HYLG V DI GGG
Sbjct: 211 DPRRTGKKDPLDPLLWRAHRPGEPSWPSPFGPGRPGWHIECSAIARHYLGGVIDIQGGGT 270
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHE A + A I A ++H ++L+G KMSKS GN + +
Sbjct: 271 DLSFPHHECSAAHAEVAAGIRPFARSYVHTAMVSLDGHKMSKSRGNLEFV------SRLR 324
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----S 353
+RLA+L + E ++T L +A +++W D L
Sbjct: 325 RAGVDPAALRLALLDHRHTEDWEWTPGLLDDAVDRMNRWRAAVALPTGPDAMGLLAAVRE 384
Query: 354 ALYNDLNTVSAIQALHKLA 372
L +DL+ A+ A+
Sbjct: 385 RLADDLDAPGAVAAVDAWV 403
>gi|321309540|ref|YP_004191869.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
gi|319801384|emb|CBY92030.1| cysteinyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
Length = 424
Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats.
Identities = 135/457 (29%), Positives = 207/457 (45%), Gaps = 61/457 (13%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+Y++LE+ + DP ++Y+CGPTVYD+ HIGN P+I+FD L R L Y
Sbjct: 1 MSLKLYDSLEQTLKTL-PKDP---KIYLCGPTVYDYVHIGNVAPLIIFDFLIRYLEYKRE 56
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
Y+ NITDIDDKI+ +A++ ++ I S+ T ++ L + PT
Sbjct: 57 NYL--YIHNITDIDDKIVNKAKE------LSLKEEEIASEYTDHYLWVMNALNVIKPTLM 108
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P+ ++HI + + +++ G A+ +++ + I NYG S++ ++ K
Sbjct: 109 PKVSDHIEDIQRDVSSLLESGFAHFEGKDVVMNIGKIKNYGCLSKQNLNMLKS------- 161
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+F LWK + W+SPWG GRPGWH EC + + Y D+HGGG+DL F
Sbjct: 162 -----NENFCLWKYMENGK-TWKSPWGDGRPGWHSECFSFINRYSRGGVDLHGGGIDLKF 215
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE A S + + IW++ G L + K+SKS + +LLE +
Sbjct: 216 PHHENENAHSEALY-SKSLSKIWMYIGHLQTQDGKISKSTNKKFLVKDLLE-------KY 267
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------KGIID 348
A +R L + Y P+ R+ E + T G +D
Sbjct: 268 SANSLRYLFLTSKYSLPLLVDESRIEEVGKEFDNYLLTINQAKTYLYLNGGEINSAGDLD 327
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGIEVCKE 399
LS NDLN + L KL +E I LG ++ E
Sbjct: 328 SEFLSIFENDLNLPEVLTWLQKLKKEVLTGIKEKKIEVVSKGGSQLIRHLEFLGFKIEDE 387
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
H +N+ L+ E L K +S AD IR+ L+
Sbjct: 388 HTVENV-----ALIDEWKNSLANKDYSKADEIRELLK 419
>gi|326436975|gb|EGD82545.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 528
Score = 233 bits (594), Expect = 5e-59, Method: Composition-based stats.
Identities = 143/532 (26%), Positives = 221/532 (41%), Gaps = 95/532 (17%)
Query: 5 IKIYNTLERKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++N L R++ + + Y CGPTVYD +HIG+A FD+L R++ ++
Sbjct: 16 LRVFNGLTRQLETVNPAGVNERGWLTWYQCGPTVYDHSHIGHAVCFQRFDILRRVMERHF 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
G V V +TDIDDKII +A E I + + F +D L L P H
Sbjct: 76 G-MHVLQVWGMTDIDDKIIRKAHTEQ------RHWQDIARQYEESFFQDMAALNILPPAH 128
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS------------FSRRK 169
R T HI ++I IQ I+ GHAY + + FD + S R
Sbjct: 129 ITRVTEHIDEIIEFIQGILDRGHAYVTPSGVYFDLQAFGEDKYGRLGKGVQSTAAASTRA 188
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + HK++ ADF LWKR +P W++P+G+GRPGWHIECSAM+S YLG+
Sbjct: 189 DADAGAAADSNDAAHKRHRADFALWKRGDAGDPTWDAPFGKGRPGWHIECSAMASKYLGQ 248
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+DL++PHH NE+AQ + H G L KMSKS GN I I
Sbjct: 249 HIDIHTGGIDLLYPHHTNELAQCESHYGHCDWVRHFWHTGHLTTRSEKMSKSLGNTIAIK 308
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
+ L++ +R+ L + YR I F+ +T A LL + + P
Sbjct: 309 DFLQSHTHND-------LRMLCLQSRYRSDIAFSDSDVTAASRLLQRLSSFVANMDATTP 361
Query: 350 A---------------------------VLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+ +AL +D NT A++ ++++ +
Sbjct: 362 FAPPQTQSLRPSPACVELMETMCTSAAALDAALCDDFNTPQALKIVNQVVTSTNHAAANS 421
Query: 383 PI-----------FNASAHILGIEVCKEHLNKN-----------ISIAIEKLVQERLILL 420
+ + G+ + + + + I+ V+ R
Sbjct: 422 DVALGVLSHAGRWVRGVLEMFGLTLPSPSGSSSSSSTTTTDGSRAAGVIDACVELRSTAR 481
Query: 421 -----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQKP 461
K + ++ D R QL S G + D + + W+ KP
Sbjct: 482 EIALSSGDADVKGRLLAACDATRDQLGSHGVEVRDARTGPS------WRWKP 527
>gi|66807293|ref|XP_637369.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74996749|sp|Q54KR1|SYCC_DICDI RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|60465778|gb|EAL63854.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 660
Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats.
Identities = 136/544 (25%), Positives = 218/544 (40%), Gaps = 113/544 (20%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
+ ++ I N+L F + + Y CGPTVYD +H+G+AR I FD++ R+++
Sbjct: 33 ETELLINNSLTGGKVPFVFNESGKGRSLTWYACGPTVYDASHMGHARTYISFDIIRRIMK 92
Query: 59 YYYGEKCVTYVRNITDIDDKIIE---------RARQEHPSIPINDAISIITSKNTQQFVK 109
Y + YV N RA + S S ++ K F +
Sbjct: 93 -NYLGFNIQYVMN---------ITDIDDKIIIRANENGIS------HSDLSKKWETAFFE 136
Query: 110 DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK 169
D L L P R T ++PQ++ ++ II +G AYE+N + FDT + + + +
Sbjct: 137 DMKLLNVLPPDALTRVTEYVPQIVEYVEKIISNGFAYESNGSVYFDTVAFSKAHDYGKLE 196
Query: 170 IDEQKMGTRVPEKY----------HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIEC 219
+ E K++ DF LWK+S P EP W SPWG GRPGWHIEC
Sbjct: 197 PNSVGNEKLAAEGEGSLTATSAVSEKRSGFDFALWKKSKPGEPVWNSPWGEGRPGWHIEC 256
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
SAM+S LG DIH GG DL FPHH+NE+AQS + N ++H+G L ++G KMS
Sbjct: 257 SAMASDLLGGNIDIHSGGSDLKFPHHDNELAQSEAFYGNRQWINYFVHSGHLLIDGLKMS 316
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
KS NFITI + LE + + +R+ ++ Y + ++++ + + A + + +
Sbjct: 317 KSLKNFITIKQALE-------KYTSRQMRMFFILHKYDKAMNYSPESMGYAIEMEKTFVE 369
Query: 340 TSTSKGII--------------------------DPAVLSALYNDLNTVSAIQALHKLAR 373
+ I + V + ++ NT A++ L L
Sbjct: 370 FFHTAKQILRDSPLSLPQFWTQAEKDLNKHLQNANDQVHQFILDNFNTSDALKTLSDLVN 429
Query: 374 ESTKN----------------HDLLPIFNASAHILGI---------EVCKEHLNKNISIA 408
++ + + G+ NI
Sbjct: 430 KTNVYIRSCAEQKTNPRLNLISAIAEYITYIFSVFGLTESSTASSMIGFGSAGKGNIEEE 489
Query: 409 I----EKLVQERLILLK---MKK----FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTR 456
+ L Q R + K + D +R + L G ++D
Sbjct: 490 MTPILNALTQFRSEVRASAIAKDTTSILKTCDNLRDEVLPLLGVKIDDKSATTAM----- 544
Query: 457 WKQK 460
WK +
Sbjct: 545 WKFE 548
>gi|291242855|ref|XP_002741321.1| PREDICTED: cysteinyl-tRNA synthetase 2, mitochondrial-like, partial
[Saccoglossus kowalevskii]
Length = 424
Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats.
Identities = 123/357 (34%), Positives = 174/357 (48%), Gaps = 20/357 (5%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+YN+L R + + Y+CGPTVYD AHIG+A + FDVL R+L + + V
Sbjct: 77 VYNSLTRTKVPLILQKDNIAKWYMCGPTVYDSAHIGHASCYVRFDVLRRILT-EFFDIDV 135
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
V +T+IDDKII RAR++ + +F D L L T R T
Sbjct: 136 VMVMGVTNIDDKIINRAREKDVD------FKQLARIYENEFASDMQALKVLPATVYTRVT 189
Query: 127 NHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
++IPQ++ +QNII G AY + FD + G + + K
Sbjct: 190 DYIPQILVFVQNIIDTGCAYSTPSGSVYFDVEAFGIERYAKLMPHVRHDHGRHI-VEPEK 248
Query: 186 KNPADFILWKRSTPMEPGWESPWGR--GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
++ DF LWK + P EP W SPWG+ GRPGWHIECS MSS G DIH GG+DL FP
Sbjct: 249 RHLRDFALWKAAKPGEPWWSSPWGQGKGRPGWHIECSTMSSAIFGNALDIHTGGIDLAFP 308
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGR--KMSKSNGNFITINELLETKKFGGRS 301
HH+NEIAQ + + N ++H+G L+L+ KMSKS GN IT+ + L +
Sbjct: 309 HHDNEIAQCEACHQTHQWTNYFLHSGILHLKDDAEKMSKSIGNTITVQDYL-------QK 361
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
A R+ L+T Y I++ + +A +L + ++ D
Sbjct: 362 HTANQFRMICLLTKYSHNIEYCEDIVMQASSILHTLSAFLSDADAYVRGQMTCHSLD 418
>gi|227833074|ref|YP_002834781.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
gi|262182436|ref|ZP_06041857.1| cysteinyl-tRNA synthetase [Corynebacterium aurimucosum ATCC 700975]
gi|310947180|sp|C3PG89|MSHC_CORA7 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|227454090|gb|ACP32843.1| MshC ligase [Corynebacterium aurimucosum ATCC 700975]
Length = 414
Score = 233 bits (593), Expect = 6e-59, Method: Composition-based stats.
Identities = 120/413 (29%), Positives = 191/413 (46%), Gaps = 34/413 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y++ + ++ I MYVCG T YD H+G+A + FD++YR L
Sbjct: 17 SPLHLYDSADGEVKRLN-IKGETATMYVCGITPYDSTHLGHAATYLTFDLIYRQLLDNGY 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y +NITD+DD + ERA ++ + + F D L+ P H
Sbjct: 76 --KVNYAQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMELLSVFPPQHF 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I ++ ++Q ++ G AY ++ D + + + +
Sbjct: 128 VGAMEAIDEITEMVQALLDAGAAYVVDDPDYPDVYASIEATKNFGYESNYSREQMETFFA 187
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D ++W+ EP WESP+G GRPGWHIECSA++++ LG FDI
Sbjct: 188 ERGGDPERPGKRDPLDALIWRAHREGEPAWESPFGPGRPGWHIECSAIATNRLGSSFDIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHE A + A +E+ A ++H G + LEG KMSKS GN + +++L+E
Sbjct: 248 GGGSDLKFPHHEFSAAHAEAALGVERMAQSYVHTGMIGLEGTKMSKSLGNLVFVHKLVEA 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA 354
IRL + HYRE D++ + L A+ L +W S + G ++
Sbjct: 308 ------GVDPSAIRLGVFSGHYREDRDWSDEVLHTAQERLERWRAASRNPGTVEEIKEVV 361
Query: 355 LY------NDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEV 396
DL+T AI L + A ++ + + A +LG+ +
Sbjct: 362 HNVRLALAEDLDTQRAIAVLDQWAEQALGAAEASEEASDVLRTAVNSLLGVRL 414
>gi|256384189|gb|ACU78759.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
gi|256385021|gb|ACU79590.1| cysteine--tRNA ligase [Mycoplasma mycoides subsp. capri str. GM12]
gi|296455708|gb|ADH21943.1| cysteine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 441
Score = 233 bits (593), Expect = 7e-59, Method: Composition-based stats.
Identities = 136/464 (29%), Positives = 212/464 (45%), Gaps = 50/464 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y++L + ++ I +Y CGPTVY++ HIGNARP+++ DVL R L+
Sbjct: 1 MQLYDSLSKTKKN---LNKKTINLYCCGPTVYNYIHIGNARPVLLVDVLIRYLKSR--NI 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V Y++NITDIDDKII +A N ++ K T +++D L P
Sbjct: 56 KVNYLQNITDIDDKIILKALDN------NLNELEVSQKYTTAYLEDLKSLNINQPDKIIL 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI-PNYGSFSRRKIDEQKMGTRVPEKY 183
+ + +MI I+N++ AY + ++ FD Y S K+DE G R+
Sbjct: 110 ISQKMNEMIDFIKNLVDINAAYVLDGDVYFDIKKYENEYCKLSGYKLDELISGKRIEIDS 169
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIF 242
K DF LWK+ T + W S +G GRPGWH EC + Y + DIH GG+DL F
Sbjct: 170 KKHYSLDFSLWKK-TDIGIKWNSVFGLGRPGWHTECVLLIDEYFNHQTIDIHVGGIDLKF 228
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE Q A ++ A+IW+HNG L + KMSKS GN I + + +
Sbjct: 229 PHHENERIQFI-AKNNKELAHIWLHNGHLQINDEKMSKSLGNVILVRDF-------NKQH 280
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------------WPQTSTSKGI 346
+R L T+Y +P++ + + +A K S +
Sbjct: 281 NKNTLRWIFLTTNYTQPLNISDDLIYQANKFFEKLTNLSKKTIQFIIKNDLKIQSINSSE 340
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
+ +DLNT + + L ++ K+ + L+ N +LG
Sbjct: 341 YINKFNEYMEDDLNTSLVLSLIDLLIKQINKDIVDKNLDNFNLLIGSLNYILDVLGFNNV 400
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ N + L + L+K K+F+ AD IR +L +G +
Sbjct: 401 FNYKFDNKTKE---LFLKWQELVKNKEFNKADIIRNKLIEQGIL 441
>gi|301108884|ref|XP_002903523.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262097247|gb|EEY55299.1| cysteinyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 678
Score = 232 bits (592), Expect = 7e-59, Method: Composition-based stats.
Identities = 141/546 (25%), Positives = 211/546 (38%), Gaps = 130/546 (23%)
Query: 16 TEF---QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
F ++ P+ ++ Y CGPTVYD AH+G+AR + D+L R+ G V V +
Sbjct: 38 EPFPRGTSVTPNILKWYACGPTVYDKAHLGHARAYVSQDILRRVAERTGGY-NVQLVMGV 96
Query: 73 TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
TD+DDKII+RA+++ N + + + QQF D RL PT R + H+P++
Sbjct: 97 TDVDDKIIKRAKEQ------NVSFHTLAWEQEQQFFADMARLYVKPPTAITRVSEHLPEI 150
Query: 133 IYLIQNIILHGHAYE--ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH------ 184
+ I+ I G AY+ + + F+T + + + Q+ E
Sbjct: 151 VKYIEEIQHKGFAYQAVDGSGVYFNTRQLGDKYGKLDPRRQTQRDEQLQTEAEAAVEESD 210
Query: 185 --------KKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K++P DF LWK + P EP W SPWG GRPGWHIECSAM+ H LG D+H
Sbjct: 211 VAEEEEKVKRDPRDFALWKAAKEPDEPAWPSPWGLGRPGWHIECSAMTHHVLGDRLDVHT 270
Query: 236 GGLDLIFPHHENEIAQSCCAD------RIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
GG+DL FPHH NEIAQ + EK N ++H G L + GRKMSKS NFI++
Sbjct: 271 GGVDLRFPHHNNEIAQCEAHNHGPQCGHDEKWCNHFVHFGHLYIRGRKMSKSLKNFISVR 330
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
+ L A RL L YR + ++ R+ +AE + S
Sbjct: 331 DFLA------EGHTADHFRLFCLQFKYRASLVYSEDRVRDAEATAGRLRGFFRSVVAYGS 384
Query: 350 AVLSALY------------------------------------NDLNTVSAIQALHKLAR 373
+ +DL+T A+ + +L
Sbjct: 385 GHDMSSSSHTETLETKSKRCEQVDLELLDALFETRALVDAALLDDLDTPRALSLVLELVS 444
Query: 374 ESTKNH---------------DLLPIFNASAHILGIEVCKEHLN---------------- 402
L + G+E +
Sbjct: 445 RGNAYLLAQRGDLGAPDEVLISLTGYVLEVLELFGLEGLHSEFSAMLRRRFTAFGHPETQ 504
Query: 403 ------------KNISIAIEKLVQERLILLKM--KK---------FSSADYIRK-QLESK 438
+ I L+Q R + + + + D +R +L
Sbjct: 505 RELDGRHELVSRDDQEALIRSLLQFRASVREEALRDPKQPGNARVLALCDALRNEELPQL 564
Query: 439 GFILED 444
G +ED
Sbjct: 565 GIQIED 570
>gi|68536033|ref|YP_250738.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
gi|123761878|sp|Q4JVN7|MSHC2_CORJK RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
ligase 2; Short=MSH ligase 2
gi|68263632|emb|CAI37120.1| cysS1 [Corynebacterium jeikeium K411]
Length = 415
Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats.
Identities = 123/430 (28%), Positives = 193/430 (44%), Gaps = 46/430 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T + + + I + MYVCG T YD H+G+A + FD+++R LR
Sbjct: 17 PQLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRAAGH 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+NITD+DD + ERA ++ + + F D LA + P
Sbjct: 76 G--VHYVQNITDVDDPLFERAERDGVD------WQDLGTSQIDLFRSDMEDLAVIPPRDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I ++I ++ ++ G AY+ + D + + + +
Sbjct: 128 IGAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESRYDEQQMAEFFA 187
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ EP W+SP+G GRPGWHIECSA++ + LG F I
Sbjct: 188 ERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHE + A +++ A+ ++H G + L+G KMSKS GN + ++ L
Sbjct: 248 GGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSRLTAA 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------II 347
IRL + HYR+ D+T L AE L+ W + +
Sbjct: 308 ------GHEPAAIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTTLDEAREL 361
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISI 407
V L NDL+T +A++AL A ++ E I
Sbjct: 362 VATVRGHLANDLDTAAALEALDDWAADTKTGA----------------AGDEAAASEIKT 405
Query: 408 AIEKLVQERL 417
AI+ L+ RL
Sbjct: 406 AIDALLGVRL 415
>gi|145223636|ref|YP_001134314.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|310947196|sp|A4TB85|MSHC_MYCGI RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|145216122|gb|ABP45526.1| cysteinyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
Length = 444
Score = 232 bits (592), Expect = 8e-59, Method: Composition-based stats.
Identities = 112/390 (28%), Positives = 182/390 (46%), Gaps = 29/390 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++++ +R+I + MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 49 PQLRLFDSADRQIRPVSP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVWRDSGH 106
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+NITD+DD + ERA ++ + + T F +D L + P
Sbjct: 107 D--VHYVQNITDVDDPLFERAARDGIG------WRELGDRETDLFREDMAALRVVPPRDY 158
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT I ++I +++ ++ G AY ++ D + +
Sbjct: 159 VAATEAIAEVIEVVEKLLASGAAYVVDDAQYPDVYFHAGATVQFGYESGYDRETMLALFA 218
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K +P D +LW+ P EP W SP+G GRPGWH+EC+A++ +G V DI
Sbjct: 219 ERGGDPDRPGKSDPLDALLWRAERPEEPSWPSPFGPGRPGWHVECAAIAMTRIGNVLDIQ 278
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + C + A ++H G + +G KMSKS GN + +++L
Sbjct: 279 GGGSDLIFPHHEFSSAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL--- 335
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
IRL + HYR+ ++ L EA+ L +W + G D +
Sbjct: 336 ---RRDGVDPGAIRLGLFAGHYRQDRYWSPAVLDEAQQRLHRWRSATALDGAPDATDVVA 392
Query: 353 ---SALYNDLNTVSAIQALHKLARESTKNH 379
L +DL+T A+ A+ A ++
Sbjct: 393 RVRRYLADDLDTPKALAAIDGWAEDTLSYG 422
>gi|120404450|ref|YP_954279.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|310947205|sp|A1TAS3|MSHC_MYCVP RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|119957268|gb|ABM14273.1| cysteinyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 429
Score = 232 bits (591), Expect = 1e-58, Method: Composition-based stats.
Identities = 114/386 (29%), Positives = 183/386 (47%), Gaps = 29/386 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y++ +R++ + MYVCG T YD H+G+A + FD+++RL R
Sbjct: 34 PQLRLYDSADRQVRPVAP--GATATMYVCGITPYDATHLGHAATYLTFDLVHRLWRDSGH 91
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+NITD+DD + ERA+++ + + T+ F +D L L P
Sbjct: 92 D--VHYVQNITDVDDPLFERAQRDGIG------WRELGDRETELFREDMAALRVLPPRDY 143
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT I +++ L++ ++ G AY ++ D + + +
Sbjct: 144 VAATEAIAEVVELVEKMLAAGAAYVVDDPQYPDVYFRADATVQFGYESGYDRDTMLALFA 203
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K +P D +LW P EP W SP+G GRPGWH+EC+A++ +G DI
Sbjct: 204 ERGGDPDRPGKSDPLDALLWLAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTGLDIQ 263
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + C + A ++H G + +G KMSKS GN + +++L
Sbjct: 264 GGGSDLIFPHHEFSAAHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL--- 320
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
IRL + HYR+ ++ L EA L +W + G D +
Sbjct: 321 ---RRDGVDPAAIRLGLFAGHYRDDRFWSPAVLDEALARLHRWRSATALAGAPDATDVVA 377
Query: 353 ---SALYNDLNTVSAIQALHKLARES 375
L +DL+T A+ AL A ++
Sbjct: 378 RVRRYLADDLDTPKALAALDGWATDA 403
>gi|226360027|ref|YP_002777805.1| cysteinyl-tRNA synthetase [Rhodococcus opacus B4]
gi|310947211|sp|C1ASS8|MSHC_RHOOB RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|226238512|dbj|BAH48860.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase MshC [Rhodococcus opacus B4]
Length = 415
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 118/410 (28%), Positives = 188/410 (45%), Gaps = 37/410 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T +R++ MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 PPLRLFDTADRQVRPVTP--GRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD + ERA ++ + ++ + T F +D L L P
Sbjct: 75 D--VHYVQNVTDVDDPLFERANRDG------EDWVVLGMRETALFREDMEALRVLPPRDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I ++I +++ + G AY ++ D + + +
Sbjct: 127 IGAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRADATEQFGYESGYDRATMDTFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K+NP D ++W+ + P EP W SP+G GRPGWHIECSA++ + +G FD+
Sbjct: 187 ERGGDPDRPGKQNPLDALVWRAARPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDVQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFV------ 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDP 349
K G IRL +L HYR+ +T Q L +A L W + S
Sbjct: 301 SKLRGEGVDPAAIRLGLLSGHYRQDRPWTEQVLADAHTRLQLWKDAAALESAQSATDTIA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHI 391
+ L +DL+T A+ AL AR ++ + +A +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRALDNGGSDTNAPTEFAAAVDALLGV 410
>gi|255084145|ref|XP_002508647.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
gi|226523924|gb|ACO69905.1| hypothetical protein MICPUN_113739 [Micromonas sp. RCC299]
Length = 744
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 137/600 (22%), Positives = 221/600 (36%), Gaps = 159/600 (26%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++ N+ + F +D + + Y+CGPTVYD AH+G+AR + FDV+ R++ Y
Sbjct: 43 RLLNSFTKTKVPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVIRRVMTD-YFRYD 101
Query: 66 VTYVRNITDIDDKI------------IERARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
V ++ N+TDIDDKI I A + + + + + +
Sbjct: 102 VRFIMNVTDIDDKIVMRAHLRRSEAMIAAAEAVGGLDALIAPLKALLASGEKNLGEQEAL 161
Query: 114 LACLAPTHQ--------------------------------------------PRATNHI 129
A L R + +
Sbjct: 162 TASLCAAIVAKDPTKVADPDWTVQDGYLALAHAFEAEFMEDMRLMGVARPDALTRVSEYT 221
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG----------SFSRRKIDEQKMGTRV 179
+++ IQ II G+AYE+N + FD + + ++ G
Sbjct: 222 EKIVQYIQTIIDRGYAYESNGSVYFDVPTFEQSPNHKYAKLNKEALKNVELAMDGEGALA 281
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ K+ DF+LWK S P EP W SPWG GRPGWHIECSAM S LG+ DI+GGG+D
Sbjct: 282 ADASEKRAENDFVLWKASKPGEPRWPSPWGLGRPGWHIECSAMCSDILGEAVDINGGGID 341
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHEN++AQS I++ N ++H G L+++G KMSKS NFITI L
Sbjct: 342 LNFPHHENQLAQSEAHYDIKQWVNYFVHTGHLHIDGLKMSKSLKNFITIRAAL------- 394
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA----- 354
+ + A IR L+ + +P+D T + +A + ++ S
Sbjct: 395 KMYTARQIRFLFLLHQWSDPMDLTPVQEGDAVTGFQQMEAAVIAEKTFVEFFHSVKGALR 454
Query: 355 -------------------------------------LYNDLNTVSAIQALHKLARESTK 377
+ +++NT + I++L +L K
Sbjct: 455 GLGCAAGYSVDQEHTWGDEERALSSAIDAARAGVHAAMIDNINTPAVIKSLKELVGGVNK 514
Query: 378 N--------------HDLLPIFNASAHILGI----------------------EVCKEHL 401
LG+ + +E +
Sbjct: 515 YLGSVAADAVRPLLVESAARYVTMILACLGVAETTGGIGLGDIAGGGGEGRGSDSKEEAM 574
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSA-----DYIRK-QLESKGFILEDYKNPDNGQRMT 455
+ + ++ + R + + A D +R L G L+D + + T
Sbjct: 575 APVLDLVVKFRDEIRALARSGAD-AKALMQACDRVRDVGLPELGVKLDDREGGALWKLST 633
>gi|72162231|ref|YP_289888.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
gi|123733517|sp|Q47NV4|MSHC_THEFY RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|71915963|gb|AAZ55865.1| cysteinyl-tRNA synthetase [Thermobifida fusca YX]
Length = 412
Score = 231 bits (590), Expect = 1e-58, Method: Composition-based stats.
Identities = 127/380 (33%), Positives = 189/380 (49%), Gaps = 25/380 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T+ + RMYVCG T YD AH+G+A + FD++ R+ R
Sbjct: 21 LSVHDTVTGSRRTITP--GATARMYVCGITPYDAAHLGHAFTYLTFDLVNRVWRDAG--H 76
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+NITDIDD ++ERA + ++ Q F +D L L P
Sbjct: 77 TVDYVQNITDIDDPLLERAAATGQD------WQELAAREIQVFREDMAALRILPPRAFLG 130
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
+ + + + G YE + +I F + P +GS S+
Sbjct: 131 VVESMDLIADFVARLRAQGVTYEVDGDIYFSAADAPGFGSLSQLDRTAMLELFAERGGDP 190
Query: 184 ---HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KK+P D++LW+ P EP W++P GRGRPGWH+ECSA+S H LG FD++GGG DL
Sbjct: 191 GRAGKKDPLDWLLWRAERPGEPAWDTPLGRGRPGWHVECSAISVHELGMGFDLNGGGDDL 250
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHE A++CCA A ++H + L+G KMSKS GN + +++L +
Sbjct: 251 IFPHHEMGAAEACCATGSRPQARHYLHVAMVGLDGEKMSKSRGNLVFVSQLRKA------ 304
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SAL 355
IRLA+L HYR ++T L AE L +W + + D L SAL
Sbjct: 305 GTDPMAIRLALLAHHYRTAWEWTDADLRTAEQRLERWRAAAAVENAPDARPLLARVRSAL 364
Query: 356 YNDLNTVSAIQALHKLARES 375
+DL+T +A+ A+ + A +
Sbjct: 365 ADDLDTATALAAVDEWADAA 384
>gi|195436238|ref|XP_002066076.1| GK22127 [Drosophila willistoni]
gi|194162161|gb|EDW77062.1| GK22127 [Drosophila willistoni]
Length = 491
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 134/497 (26%), Positives = 210/497 (42%), Gaps = 83/497 (16%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
+ Y CGPTVYD AH+G+A + D++ R+LR Y+ VT NITD+DDKII RAR+
Sbjct: 2 VSWYTCGPTVYDSAHLGHASTYVKVDIIQRILRDYFRINLVT-AMNITDVDDKIIRRARE 60
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ +F +D L P + + +I + I +I + A
Sbjct: 61 SGC------NWLDMARAYEAEFREDMLSLNVQPPDIRSHVSANIDNIQRFINELISNEQA 114
Query: 146 YEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPG 203
Y + + FD S +YG R ID + HK++ +DF LWK P EP
Sbjct: 115 YVTKDYSVYFDVSKAVHYGKLQRADIDS--STEPGEQGTHKRHRSDFALWKAKKFPDEPS 172
Query: 204 WESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W + W G GRPGWHIECSA++ + G+ D H GGLDL FPHHENE AQ C ++
Sbjct: 173 WPASWGGEGRPGWHIECSAIAGMFFGRRLDFHAGGLDLRFPHHENEEAQCCARYETDQWV 232
Query: 263 NIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
N W+H G L++ + KMSKS N I+++ELL + + A R+A L+++YR +
Sbjct: 233 NYWMHTGQLHVAGDKDKMSKSLKNTISVSELL-------KHYTADEFRMACLLSNYRNAM 285
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIID----------------------PAVLSALYND 358
++ Q + A L K+ +L +D
Sbjct: 286 PYSDQLMITARQTLQKFRNFQADLSAYTSFLKPLKYLDEGALRAQLAHTVNEFDESLRDD 345
Query: 359 LNTVSAIQALHKLARESTKNHDL------------LPIFNASAHI-------LGIEVCKE 399
+T + L ++ + L + A+ + G+ KE
Sbjct: 346 FDTARGLSVLMDQMSSISRCINDQEGNAEQEPAYCLDLLIAAGNFINKVMGDFGLTELKE 405
Query: 400 HLNK------------NISIAIEKLVQERLILLKM------KK---FSSADYIRKQLESK 438
+ + S + ++ R + + K + D +R L+ +
Sbjct: 406 TESSKSRQQQLSALGLDSSNLVSDILSLRGNIRQQATAQSPKNLQLLAVCDDLRNVLQQQ 465
Query: 439 GFILEDYKNPDNGQRMT 455
G + D+K + T
Sbjct: 466 GIQVRDHKQGSSWVVAT 482
>gi|290977210|ref|XP_002671331.1| predicted protein [Naegleria gruberi]
gi|284084899|gb|EFC38587.1| predicted protein [Naegleria gruberi]
Length = 416
Score = 231 bits (589), Expect = 2e-58, Method: Composition-based stats.
Identities = 122/362 (33%), Positives = 174/362 (48%), Gaps = 35/362 (9%)
Query: 7 IYNTLERKITEFQ----AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+YNTL + + D I Y CGPTVYD H+G+AR + D++YR+L + Y
Sbjct: 55 LYNTLSKSKVSLKIAKRLSDVPVINWYSCGPTVYDDTHLGHARNYVCLDIIYRILAH-YF 113
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V ITD+DDKI++RA + + S I+ K F++D +L + P
Sbjct: 114 NYPVLHVMGITDVDDKILKRAAE------LGKQPSEISRKYEFDFIEDMKKLNVIQPYVY 167
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSI----PNYGSFSRRKIDEQKMGT 177
R T HI ++ ++ + +G Y N + FD+ YG S E
Sbjct: 168 TRVTEHIEEIKQFVEEMEKNGFTYTTANGGVYFDSKKFEQNDHYYGKLSPNNAQESIQQE 227
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK-----VFD 232
+ + KK+P DF LWK ++ GWES WG GRPGWHIECSAM H D
Sbjct: 228 HIEHREEKKDPRDFALWKFTSRDYLGWESKWGYGRPGWHIECSAMIDHIFNNKSGAATID 287
Query: 233 IHGGGLDLIFPHHENEIAQ-------SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
IH GG+DL FPHH NEIAQ C R N +IH G L+++G KMSKS NF
Sbjct: 288 IHSGGIDLAFPHHNNEIAQSEAKNHAHFCCSRETNWCNYFIHVGHLHIKGLKMSKSLKNF 347
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
ITI + L + + R+ L+ Y + +D+ + EA + + +
Sbjct: 348 ITIKDFL-------KRYSPDQFRIFCLLHQYNQTLDYNEDAIGEAIKVEKRILDFLHNIS 400
Query: 346 II 347
+
Sbjct: 401 KL 402
>gi|306836112|ref|ZP_07469098.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304567962|gb|EFM43541.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 412
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 119/408 (29%), Positives = 200/408 (49%), Gaps = 32/408 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +Y++ + Q + MYVCG T YD H+G+A + FD++YR ++
Sbjct: 18 QLYLYDSANQTKAPVQ-VKGDTATMYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAG 74
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
K V Y +NITD+DD + ERA ++ + + F D L+ + P H
Sbjct: 75 KKVNYAQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRSDMELLSVIPPQHFI 128
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A + +++ ++Q ++ +G AY ++ D + + + + R
Sbjct: 129 GAMEAVDEIVDMVQKLLDNGAAYVVDDPEYPDVYASIDATEEFGYESNYSMEQMREFFAE 188
Query: 184 H--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
KK+P D ++W+ EP W+SP+G GRPGWHIECSA++++YLG FDI G
Sbjct: 189 RGGDPDRPGKKHPMDALIWRAHREGEPAWKSPFGPGRPGWHIECSAIATNYLGSTFDIQG 248
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE A + A +++ A ++H G + L+G KMSKS GN + +++L+E
Sbjct: 249 GGSDLKFPHHEFSAAHAEAALGVDRMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLVE-- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---- 351
+ IRL + HYR D++ + L +A+ L+ W + G + A
Sbjct: 307 ----QGEDPSAIRLGVFSGHYRAERDWSDEVLDQAKARLATWRTALEAPGSLSAAEGAVA 362
Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFN-ASAHILGI 394
AL +DL+T +A++A+ A + + A +LG+
Sbjct: 363 GLRQALADDLDTPTALRAIDDWAGSDRGEDEEGAAQLVRTALDSLLGV 410
>gi|110004174|emb|CAK98512.1| probable cysteinyl-trna synthetase protein [Spiroplasma citri]
Length = 445
Score = 231 bits (588), Expect = 2e-58, Method: Composition-based stats.
Identities = 138/465 (29%), Positives = 214/465 (46%), Gaps = 48/465 (10%)
Query: 5 IKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL R F I +Y CGPTVY++ HIGNAR +I D+L L++ +
Sbjct: 1 MKLYNTLTRN---FTDYSQTKKINIYGCGPTVYNYIHIGNARAIITVDLLVSFLQFQ--Q 55
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y++N TDIDDKII +A EH + I + F +D L PT
Sbjct: 56 IEVNYIQNYTDIDDKIIAKAAAEHKTE------QEIAEFYIKAFEEDVFNLNVRTPTKWV 109
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEK 182
R T+H+ ++ IQ ++ AYE N + FD YG + +KI E + R+
Sbjct: 110 RVTDHVKDIVTFIQKLVKINAAYEVNGSVYFDIAKYQTQYGQLANKKISELEANARIEHD 169
Query: 183 YHKKNPADFILWKRSTP--MEPGWESPWG--RGRPGWHIECSAMSSHYLG-KVFDIHGGG 237
+K + DF LWK++T P ++ +GRPGWH EC+ + + + DIH GG
Sbjct: 170 ANKHSQYDFALWKQTTEGISFPFYDQKGKLYQGRPGWHTECAVLIDKFFHKETIDIHAGG 229
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+DL+FPHHENE Q A ++ A IW+HNG LN+ +KMSKS N I + + +
Sbjct: 230 IDLVFPHHENERIQFF-AKNNKEIAKIWMHNGHLNVADKKMSKSLNNTILVRDFI----- 283
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
+ + A +R + T+Y +P++ T + A+ K + + +
Sbjct: 284 --KLYGANTLRYLLYATNYTQPLNVTETLIISAQGETEKIFKVLKAINLYLVEYDLNYNL 341
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN--------------- 402
+ + + L +LA ++L I + I+ ++ + LN
Sbjct: 342 TQHGHNVKEVLAELANNLNSP-NVLNIISKMTKIINTQLRDKKLNLQLASDFYNIIFNIM 400
Query: 403 ------KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
IS I K + E + K F AD +RK L K +
Sbjct: 401 NFNFKLPLISSEIRKYLLEWIKSKNNKDFVKADELRKVLVEKDIL 445
>gi|111017896|ref|YP_700868.1| cysteinyl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|122956108|sp|Q0SIC6|MSHC_RHOSR RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|110817426|gb|ABG92710.1| cysteine--tRNA ligase [Rhodococcus jostii RHA1]
Length = 415
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 117/410 (28%), Positives = 186/410 (45%), Gaps = 37/410 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T +R++ MYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 PPLRLFDTADRQVRPVTP--GRTATMYVCGITPYDATHLGHAATYLTFDLVNRIWRDAGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD + ERA ++ + ++ + T F +D L L P
Sbjct: 75 D--VHYVQNVTDVDDPLFERANRDG------EDWVVLGMRETALFREDMEALRVLPPRDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I ++I +++ + G AY ++ D N + +
Sbjct: 127 IGAVESIGEVIEMVEKFVASGAAYVVDDPEFPDVYFRANATEQFGYESGYDRETMDKFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D ++W+ P EP W SP+G GRPGWHIECSA++ + +G FD+
Sbjct: 187 ERGGDPDRPGKEDPLDALVWRAVRPGEPSWPSPFGPGRPGWHIECSAIALNRIGSGFDVQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G + L+G KMSKS GN + +
Sbjct: 247 GGGSDLIFPHHEYSAAHAESATGDRRFARHYVHTGMIGLDGEKMSKSRGNLVFV------ 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
K G IRL +L HYR+ +T Q L +A L W + +
Sbjct: 301 SKLRGEGVDPAAIRLGLLSGHYRQDRPWTEQLLADAHTRLQLWKDAAALESAPSATDTIA 360
Query: 352 --LSALYNDLNTVSAIQALHKLAR--------ESTKNHDLLPIFNASAHI 391
L +DL+T A+ AL AR ++ + +A +
Sbjct: 361 RLRQHLADDLDTPKALDALDGWARRALDHGGSDTNAPSEFAAAVDALLGV 410
>gi|296418824|ref|XP_002839025.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635019|emb|CAZ83216.1| unnamed protein product [Tuber melanosporum]
Length = 718
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 146/593 (24%), Positives = 213/593 (35%), Gaps = 149/593 (25%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ IYN+L R+ F IDP I Y CGPTVYD H+G+AR + DVL R+LR
Sbjct: 23 PPLHIYNSLTREKNVFVPIDPSGRRITWYCCGPTVYDAGHLGHARNYVTTDVLRRILRD- 81
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPI---------------------------- 92
Y V +V+N+TD+DDKII RARQ+H
Sbjct: 82 YFGFDVQFVQNVTDVDDKIILRARQQHLLEEFISRNSSITPEVASTVSTAWTAYLKKNTA 141
Query: 93 ------------------NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
+ + I+ K T + ++
Sbjct: 142 AGDDVTPENFETWAVGAQKEIMMILDEKTTNATSSILLPYLDSLNQGREYPPEVFSKLTS 201
Query: 135 LIQNIILHGHAYEA--NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--------KYH 184
+N A + S +K+ ++ + +
Sbjct: 202 YWENHFNEDMATLNVLPPTTVTRVSEFIPENVAFVKKLVDRGFAYPTADGSSLIADGEAS 261
Query: 185 KKNPADFILWKRS---TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK P DF LWK P EP W+SPWG+GRPGWHIECS M S LG DIH GG+DL
Sbjct: 262 KKTPQDFALWKAFKAEKPGEPSWDSPWGKGRPGWHIECSVMCSEVLGGQVDIHSGGIDLA 321
Query: 242 FPHHENEIAQSCC-----------ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FPHH+NEIAQS AD + N ++H G L++ G KMSKS NF++I +
Sbjct: 322 FPHHDNEIAQSEAYWDGCCDTPKTADGKHQWVNYFLHMGHLSIHGSKMSKSLKNFVSIRD 381
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---------- 340
L W +R+ L+ +R+ I+ L EA+ + +
Sbjct: 382 ALTRG-----GWTPRGLRVVFLLGGWRDGIEVREGVLMEAKSWETTVAKFFSNVKALIAE 436
Query: 341 ----------------------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ +AL + NT +A++AL L + K
Sbjct: 437 EEEEEKKGNRAKQLFGPLEHAIYKDLDTARQNLHTALCDSFNTPTAMKALTDLIGSTNKY 496
Query: 379 HDL---LPIFNASAH-------ILGIEVCKEHLNKN----------ISIAIEKLV----- 413
L A I G++ + + A + L+
Sbjct: 497 MSRTKSLAAVKEIARWVTRIVTIFGLDSTSTPNGSDRIGWADSATSSTGAEDILLPYLRT 556
Query: 414 ------QERLILLKM-KK------FSSADYIRK-QLESKGFILEDYKNPDNGQ 452
R + + K +D +R L S G L+D ++
Sbjct: 557 LSTFRDNVRTLAISSPKDTISKDILLLSDRLRDHDLASLGVALDDRESAKGAP 609
>gi|257056227|ref|YP_003134059.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|310947214|sp|C7MWX8|MSHC_SACVD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|256586099|gb|ACU97232.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 415
Score = 230 bits (587), Expect = 3e-58, Method: Composition-based stats.
Identities = 121/393 (30%), Positives = 197/393 (50%), Gaps = 31/393 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+ +++Y+T +I P + +MYVCG T YD H+G+A + FD+++RL
Sbjct: 16 SRPLRLYDTATGQIR---PTAPGRVAKMYVCGITPYDATHLGHAATYLAFDLVHRLWLDA 72
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V YV+N+TDIDD ++ERA ++ + ++ + T F +D L L P
Sbjct: 73 GHE--VHYVQNVTDIDDPLLERAERDS------EDWVVLGLRETALFREDMEALRVLPPR 124
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMG 176
A IP+++ +I+ ++ G AY ++ ++ FD S +G S + +
Sbjct: 125 DFVGAVESIPEVVEMIEKLLASGAAYRVDDPEYPDVYFDRSFTGRFGYESNYDDETMRAI 184
Query: 177 TRV----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
P++ K++P D +LW+ P EP W+S GRGRPGWHIECSA++ +LG FD
Sbjct: 185 FPERGGDPDRPGKRDPLDALLWRVERPGEPAWDSSLGRGRPGWHIECSAIALKHLGIGFD 244
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
+ GGG DL+FPHHE A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 245 VQGGGSDLVFPHHEFSAAHAEAMTGEHPFARHYVHAGMIGLDGEKMSKSKGNLVFVSRLR 304
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGII 347
IRLA+ HYR+ ++T + L +A L++W +
Sbjct: 305 ADDV------DPSAIRLALFAGHYRDDREWTDELLKQANSRLARWREAVSLPSGPDAEAT 358
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ L +DL+T A+ A+ E+ ++
Sbjct: 359 VDRLRDHLADDLDTPKALAAVDAWVDEALRHRS 391
>gi|194754415|ref|XP_001959490.1| GF12902 [Drosophila ananassae]
gi|190620788|gb|EDV36312.1| GF12902 [Drosophila ananassae]
Length = 559
Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats.
Identities = 145/513 (28%), Positives = 224/513 (43%), Gaps = 86/513 (16%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I IYN R+ P Y CGPTVYD H+G+A + D+L R+LR Y+
Sbjct: 49 INIYNPGMRRKVPLILRSPHMATWYTCGPTVYDETHLGHASTYVKVDILQRILRDYFKIN 108
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VT NITD+DDKII RA + + +F +D RL P +
Sbjct: 109 LVT-AMNITDVDDKIIMRASLDGQD------WLQLARDYEAEFRRDMLRLNVKPPDVRSH 161
Query: 125 ATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T+ +P +I IQ +I +AY ++N + FD S YG ++ I+E+
Sbjct: 162 VTSSMPVIIQFIQELIDDNYAYITSSNSVYFDVSKSKEYGKLAKVTIEEETS------SN 215
Query: 184 HKKNPADFILWKRST-PMEPGWESPWG-RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K+N ADF LWK EP W++PWG GRPGWHIECSA++ + G+ D H GGLDL
Sbjct: 216 EKRNSADFALWKARKTQKEPSWQAPWGGEGRPGWHIECSAIAGLFFGRTVDFHAGGLDLR 275
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENE AQ C + ++ N W+H G L+L + RKMSKS N I++ ELL
Sbjct: 276 FPHHENEEAQCCARYKTDQWVNYWLHTGQLHLTGDQRKMSKSLRNTISVEELL------- 328
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------- 350
+ + A R+A L+++YR + ++ + A L ++
Sbjct: 329 KKYTADEFRMACLLSNYRNAMYYSDDLMQTARQTLQRFKNFHADLSAYVQFLKPVHLLDE 388
Query: 351 -------------VLSALYNDLNTVSAIQALHKLARESTKNHDL------------LPIF 385
++L +D +T AI + ++ + + +
Sbjct: 389 GALRAQLAHTMAEFDNSLRDDFDTSRAISVMIDQMSSISRCINEQKVDAQEEPAYCMDLL 448
Query: 386 NASAHI-------LGI--EVCKEHLNK---------NISIAIEKLVQERLILLKM----- 422
A+ + G+ KE L + SI ++ ++ R + +
Sbjct: 449 MAAGNFINRAMLTFGVSELAPKEALEAQVPSTTHKIDSSILVDDVLSVRGRMRQEAFSGQ 508
Query: 423 -KK---FSSADYIRKQLESKGFILEDYKNPDNG 451
K ++ D +R L+ G + D+K +
Sbjct: 509 QKNSQLLAACDELRTLLQQHGIQVRDHKQGSSW 541
>gi|296165216|ref|ZP_06847763.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295899405|gb|EFG78864.1| cysteine--tRNA ligase [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 411
Score = 230 bits (586), Expect = 4e-58, Method: Composition-based stats.
Identities = 125/411 (30%), Positives = 201/411 (48%), Gaps = 33/411 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T +R++ S MYVCG T YD H+G+A + FD++YR ++
Sbjct: 17 PELRLYDTSDRQVRPVAP--GSTATMYVCGITPYDSTHLGHAATYLTFDLVYR--QWLDL 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD + ERA ++ + + +F +D L L P
Sbjct: 73 GHDVHYVQNVTDVDDPLFERAERDGVD------WRELGDREVARFREDMAALRVLPPREY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNE---IIFDTSSIPNYGSFSRRK----IDEQKM 175
AT IP+++ L++ ++ G AY + + + + + P +G S +
Sbjct: 127 VAATQAIPEVVELVEKMLASGGAYVIDGDYPDVYYRADATPQFGYESGYDRETMLRLFGE 186
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
PE+ K + D +LW+ + P EP W SP+G GRPGWH+EC+A++S +G DI G
Sbjct: 187 RGGDPERAGKTDELDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIASSRIGSGLDIQG 246
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + C + A ++H G + +G KMSKS GN + ++ L
Sbjct: 247 GGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTL---- 302
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPA 350
+ IRL +L HYR ++ Q L EA L +W + +
Sbjct: 303 --RAQGVEPAAIRLGLLSGHYRADRFWSPQVLEEANTRLGRWRSATGLPAGPDAADVIAR 360
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFN-ASAHILGIEV 396
V L +DLNT A+ AL A ++ + + D + A +LG+E+
Sbjct: 361 VRQYLADDLNTPKALAALDGWATDALEYGGHDTDAPRLVATAIDALLGVEL 411
>gi|13508095|ref|NP_110044.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
gi|2500964|sp|P75423|SYC_MYCPN RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1674171|gb|AAB96128.1| cysteinyl-tRNA synthetase [Mycoplasma pneumoniae M129]
Length = 437
Score = 229 bits (584), Expect = 7e-58, Method: Composition-based stats.
Identities = 138/462 (29%), Positives = 213/462 (46%), Gaps = 55/462 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K + +T+ + ++ I +Y+CGPTVY+ H+GN RP+IVFDVL R+L+
Sbjct: 5 EPKFTLIDTVSNQSVV---LEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQAA- 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V +V+NITDIDDKII+ A+Q+ S + + + + +L L H
Sbjct: 61 -QYKVQFVQNITDIDDKIIKIAQQQEISE------AQLCKQQITAYKSLLKKLNILPIKH 113
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
T+ I +M I ++ G AY + F S +P YG + R ++ +
Sbjct: 114 LQ-VTDKIDKMPGYIARLVKKGFAYVSPLGNTYFSVSQLPQYGILANRVVETIE-----D 167
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K+N DF+LWK T W SPWG GRPGWH+EC+ + + IHGGG+DL
Sbjct: 168 EATDKRNKLDFVLWK-QTTAGVKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDL 226
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE A + W+H G L E +KMSKS NF+ + L F
Sbjct: 227 KFPHHENENAMHMALYD-KPLTQHWMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF--- 282
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPA 350
++R HY P+D + + +A + + W S I P
Sbjct: 283 ----RILRWLFYQKHYYHPLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPK 338
Query: 351 VLSALY----NDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
++ N+LN +AI + KL ++ + + L + +ILGI
Sbjct: 339 QFEPVFKALLNNLNFANAITHIWKLVKQINHDVSKQNLSGLKEHLSHLEWALNILGIGFK 398
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
H N+ +L+++ L K + AD +R++L KG
Sbjct: 399 SIHTKLNV-----QLIKKWASLRKNGQLDKADEVRQKLIKKG 435
>gi|301633284|gb|ADK86838.1| cysteine--tRNA ligase [Mycoplasma pneumoniae FH]
Length = 437
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 138/462 (29%), Positives = 213/462 (46%), Gaps = 55/462 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K + +T+ + ++ I +Y+CGPTVY+ H+GN RP+IVFDVL R+L+
Sbjct: 5 EPKFTLIDTVSNQSVV---LEQKQINIYLCGPTVYNDLHLGNTRPLIVFDVLQRVLQAA- 60
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V +V+NITDIDDKII+ A+Q+ S + + + + +L L H
Sbjct: 61 -QYKVQFVQNITDIDDKIIKIAQQQEISE------AQLCKQQITAYKSLLKKLNILPIKH 113
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
T+ I +M I ++ G AY + F S +P YG + R ++ +
Sbjct: 114 LQ-VTDKIDKMPGYIARLVQMGFAYVSPLGNTYFSVSQLPQYGILANRVVETIE-----D 167
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E K+N DF+LWK T W SPWG GRPGWH+EC+ + + IHGGG+DL
Sbjct: 168 EATDKRNKLDFVLWK-QTTAGVKWNSPWGWGRPGWHVECAFLIDYSFKDQLTIHGGGVDL 226
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHENE A + W+H G L E +KMSKS NF+ + L F
Sbjct: 227 KFPHHENENAMHMALYD-KPLTQHWMHIGHLMFENQKMSKSLQNFLLAVDFLTIHDF--- 282
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPA 350
++R HY P+D + + +A + + W S I P
Sbjct: 283 ----RILRWLFYQKHYYHPLDLSQSLIEQACSDIKRIQKAVNVCRTWFVYSEQSAIPAPK 338
Query: 351 VLSALY----NDLNTVSAIQALHKLARESTKN---------HDLLPIFNASAHILGIEVC 397
++ N+LN +AI + KL ++ + + L + +ILGI
Sbjct: 339 QFEPVFKALLNNLNFANAITHIWKLVKQINHDVSKQNLSGLKEHLSHLEWALNILGIGFK 398
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
H N+ +L+++ L K + AD +R++L KG
Sbjct: 399 SIHTKLNV-----QLIKKWASLRKNGQLDKADEVRQKLIKKG 435
>gi|227503624|ref|ZP_03933673.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
gi|227075660|gb|EEI13623.1| cysteinyl-tRNA synthetase [Corynebacterium accolens ATCC 49725]
Length = 412
Score = 228 bits (582), Expect = 1e-57, Method: Composition-based stats.
Identities = 118/408 (28%), Positives = 200/408 (49%), Gaps = 32/408 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +Y++ + Q + MYVCG T YD H+G+A + FD++YR ++
Sbjct: 18 QLYLYDSANQTKAPVQ-VKGDTATMYVCGITPYDSTHLGHAATYLTFDLIYR--QFLDAG 74
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
K V Y +NITD+DD + ERA ++ + + F D L+ + P H
Sbjct: 75 KKVNYAQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRSDMELLSVIPPQHFI 128
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A + +++ ++Q ++ +G AY ++ D + + + + R
Sbjct: 129 GAMEAVDEIVDMVQKLLDNGAAYVVDDPEYPDVYASIDATEEFGYESNYSMEQMREFFAE 188
Query: 184 H--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
KK+P D ++W+ EP W+SP+G GRPGWHIECSA++++YLG FDI G
Sbjct: 189 RGGDPDRPGKKHPMDALIWRAHREGEPAWKSPFGSGRPGWHIECSAIATNYLGSTFDIQG 248
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE A + A +++ A +++ G + L+G KMSKS GN + +++L+E
Sbjct: 249 GGSDLKFPHHEFSAAHAEAALGVDRMAQFYVYTGMIGLDGVKMSKSLGNLVFVHKLVE-- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---- 351
+ IRL + HYR D++ + L +A+ L+ W + G + A
Sbjct: 307 ----QGEDPSAIRLGVFSGHYRAERDWSDEVLDQAKARLATWRTALEAPGALSAAEDAVA 362
Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFN-ASAHILGI 394
AL +DL+T +A++A+ A + + A +LG+
Sbjct: 363 GLRQALADDLDTPAALRAIDNWAGSDRGEDEEGAAQLVRTALDSLLGV 410
>gi|158316655|ref|YP_001509163.1| cysteinyl-tRNA synthetase [Frankia sp. EAN1pec]
gi|310947183|sp|A8LH67|MSHC_FRASN RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|158112060|gb|ABW14257.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
Length = 444
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 106/342 (30%), Positives = 169/342 (49%), Gaps = 20/342 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++ +T + +R+Y CG T YD H+G+A + +D++ R+LR
Sbjct: 40 RDLRVLDTAHGGVRTLDL--GPTVRLYACGITPYDATHLGHAFTYLTYDLVQRVLRDAGH 97
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N+TD+DD ++ERA ++ + + F D T L L P H
Sbjct: 98 E--VRYVQNVTDVDDPLLERATRDGID------WRDLARREIDLFRADMTALRILPPDHY 149
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK----IDEQKMGTR 178
+ ++ ++ ++ G AY + ++ F ++ P++G + +
Sbjct: 150 VGVVEAVGLIVDMVSQLVERGAAYSVDGDLYFSVAAAPDFGQVAHLDPAQMLVSCAEHGG 209
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
P + KK+P D +LW+ P EP W SP+G GRPGWH+ECSA++ HYLG DI GGG
Sbjct: 210 DPGRPGKKDPLDPLLWRAERPGEPSWPSPFGPGRPGWHVECSAIARHYLGATIDIQGGGS 269
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
DL FPHHE A + A+ A ++H ++L+G KMSKS GN ++ LL
Sbjct: 270 DLAFPHHECSAAHAEVANGARPFARAYVHTALVSLDGHKMSKSRGNLEFVSRLLA----- 324
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
R IRLA+L H+ ++T + A L +W
Sbjct: 325 -RGADPAAIRLALLQHHHTVEWEWTAAAMPAAAERLDRWRAA 365
>gi|326780298|ref|ZP_08239563.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces cf. griseus XylebKG-1]
gi|326660631|gb|EGE45477.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces cf. griseus XylebKG-1]
Length = 409
Score = 228 bits (580), Expect = 2e-57, Method: Composition-based stats.
Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDGQD------WTELAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AY+ + +I F + P++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDSGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + P EP W+ + G GRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
+RLA+L HYR ++T Q L EA L++W S + V
Sbjct: 301 -RREGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380
>gi|297560505|ref|YP_003679479.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
gi|310947207|sp|D7B412|MSHC_NOCDD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|296844953|gb|ADH66973.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Nocardiopsis dassonvillei subsp. dassonvillei
DSM 43111]
Length = 407
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 115/340 (33%), Positives = 164/340 (48%), Gaps = 21/340 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T +I MY CG T YD AH+G+A + FD++ R+ R +
Sbjct: 19 LRVHDTATGRIRTTTP--GPRAGMYACGITPYDAAHLGHAFTYLTFDLVNRVWRDAGHD- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TDIDD ++ERA + + F +D L + PT
Sbjct: 76 -VNYVQNTTDIDDPLLERAEATGVD------WRDLAHREIDVFREDMAALRIIPPTSYVG 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
+ + L I G AYE + ++ F + P +G S +
Sbjct: 129 VVESVDLISDLAARIRDTGAAYELDGDLYFSVAEAPEFGEISNLDRGQMLELFGERGGDP 188
Query: 184 ---HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
KK+P D++LW+ P EP W+SP GRGRPGWHIECSA++ LG FD++GGG DL
Sbjct: 189 QRTGKKDPLDWLLWRAERPGEPAWDSPLGRGRPGWHIECSAIALDRLGPAFDLNGGGSDL 248
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHE A++ CA A+ +H G + L+G KMSKS GN + + K +
Sbjct: 249 IFPHHEMGAAETRCATG-GPNAHNHLHVGMVGLDGEKMSKSLGNLVFV------SKLRQQ 301
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
VIRLAML HYR P ++T L A +W
Sbjct: 302 GVDPAVIRLAMLAHHYRAPWEWTDAELPAATARAERWRSA 341
>gi|260578725|ref|ZP_05846633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium jeikeium ATCC 43734]
gi|258603222|gb|EEW16491.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium jeikeium ATCC 43734]
Length = 415
Score = 227 bits (579), Expect = 2e-57, Method: Composition-based stats.
Identities = 120/414 (28%), Positives = 191/414 (46%), Gaps = 35/414 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T + + + I + MYVCG T YD H+G+A + FD+++R LR
Sbjct: 17 PQLRLYDTADDVVKPVE-IPAGEVGMYVCGITPYDSTHLGHAATYLTFDLIHRYLRAGGH 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+NITD+DD + ERA ++ + + F D LA + P
Sbjct: 76 G--VHYVQNITDVDDPLFERAERDGVD------WQDLGTSQIDLFRSDMEDLAVIPPRDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A I ++I ++ ++ G AY+ + D + + + +
Sbjct: 128 IGAMESIDEVIEMVAKLLEVGAAYQLEGDEYPDIYADYTFLPQFGYESRYSEEQMAEFFA 187
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ EP W+SP+G GRPGWHIECSA++ + LG F I
Sbjct: 188 ERGGDPERPGKRHPMDALLWRAHREGEPKWDSPFGPGRPGWHIECSAIAVNRLGAPFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHE + A +++ A+ ++H G + L+G KMSKS GN + +++L
Sbjct: 248 GGGSDLRFPHHEFSATHAEAAHGVDRMAHHYVHTGMIGLDGTKMSKSLGNLVFVSKLTAA 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------II 347
IRL + HYR+ D+T L AE L+ W + +
Sbjct: 308 ------GHEPAAIRLGVYAGHYRQDRDWTNDVLAHAEHRLASWRAALATGSTPLDEAREL 361
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-----PIFNASAHILGIEV 396
V L NDL+T +A+ AL A ++ I A +LG+ +
Sbjct: 362 VATVRGHLANDLDTAAALDALDGWAADTKAGAAGDEAAASEIKTAIDALLGVRL 415
>gi|182439633|ref|YP_001827352.1| cysteinyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|310947221|sp|B1W2Y7|MSHC_STRGG RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|178468149|dbj|BAG22669.1| putative cysteinyl-tRNA synthetase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 409
Score = 227 bits (579), Expect = 3e-57, Method: Composition-based stats.
Identities = 124/381 (32%), Positives = 195/381 (51%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDGQD------WTELAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AY+ + +I F + P++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYDLDGDIYFSVDTDPHFGEVSGLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + P EP W+ + G GRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGEGRPGWHIECVAIALDHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSTL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
+RLA+L HYR ++T Q L EA L++W S + V
Sbjct: 301 -RREGVDPAALRLALLSRHYRSDWEWTDQVLAEAVERLARWRAAVSRPDGPSAEALVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380
>gi|239940119|ref|ZP_04692056.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|239986608|ref|ZP_04707272.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291443551|ref|ZP_06582941.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291346498|gb|EFE73402.1| cysteinyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 409
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 123/381 (32%), Positives = 193/381 (50%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDGQD------WTELAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AY+ ++ F + P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYDLEGDVYFSVDADPHFGEVSGLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + P EP W+ + G GRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARPGEPSWDGASLGDGRPGWHIECVAIALDHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVGLDGEKMSKSRGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T Q L +A L++W S + V
Sbjct: 301 -RRDGVDPAAIRLALLSRHYRSDWEWTDQVLADAVERLARWRAAVSRPDGPSADALVEQV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380
>gi|296117896|ref|ZP_06836479.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium ammoniagenes DSM 20306]
gi|295969127|gb|EFG82369.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium ammoniagenes DSM 20306]
Length = 420
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 124/415 (29%), Positives = 201/415 (48%), Gaps = 39/415 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+Y++ + KI + ++ MYVCG T YD H+G+A + FDV+YR+L+
Sbjct: 18 SLKLYDSADEKIKPVR-VEGDTATMYVCGITPYDSTHLGHAATYVTFDVIYRMLQDQG-- 74
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+NITD+DD + ERA ++ + F D +L P
Sbjct: 75 HKVHYVQNITDVDDPLFERAERDGVD------WRELGESQVDLFRSDMEQLGVYPPQDYI 128
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----- 178
A I ++I L Q ++ +G AY ++ D + + S + + +
Sbjct: 129 GAIESIDEVIDLTQKLLDNGAAYAVDDAKYPDVYASVDATSQFGYESNYDRETMEKFFAE 188
Query: 179 ---VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
P++ KK+P D +LW+ + EP WESP+G GRPGWH+ECSA++++ LG F I G
Sbjct: 189 RGGDPDREGKKDPLDALLWRAAREGEPSWESPFGAGRPGWHVECSAIATNRLGSSFLIQG 248
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL +PHHE A + +++ A ++H G + L+G KMSKS GN + +++L+E
Sbjct: 249 GGSDLKYPHHEYSAAHAEAGLGVDRMAEFYVHAGMIGLDGTKMSKSLGNLVFVHKLVE-- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------------- 340
+ A IRL + HYR D++ + L+ A L+ W
Sbjct: 307 ----QGAEASAIRLGLYAHHYRGDRDWSDEVLSTAVERLNTWRTAVAETDDADASIDAAA 362
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ A+ L NDL+TV A+ + + A++ T + A +LG+
Sbjct: 363 AQQAAEETVQALREYLANDLDTVGALNVIDEWAKKPTTAEAAGVVATAVDGLLGV 417
>gi|172040712|ref|YP_001800426.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
gi|310947168|sp|B1VDU4|MSHC2_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase 2;
Short=L-Cys:GlcN-Ins ligase 2; AltName: Full=Mycothiol
ligase 2; Short=MSH ligase 2
gi|171852016|emb|CAQ04992.1| MshC ligase [Corynebacterium urealyticum DSM 7109]
Length = 439
Score = 227 bits (578), Expect = 3e-57, Method: Composition-based stats.
Identities = 120/391 (30%), Positives = 193/391 (49%), Gaps = 30/391 (7%)
Query: 3 KKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++Y+T + R D + + +YVCG T YD H+G+A FD++ R LR
Sbjct: 31 PELRLYDTADDRVKAVALPDDGAPVGIYVCGITPYDSTHLGHAATYNTFDLVNRYLRAAG 90
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N+TD+DD + ERA ++ + + T F D T+L L P
Sbjct: 91 HG--VTYVQNVTDVDDPLFERADRDGVD------WRELGKEQTDLFRSDMTQLRILPPEF 142
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A I +++ ++ ++ G AY + E D + Y + + R
Sbjct: 143 FVGAMETIDEVVEMVSTLLDKGAAYVVDGE-YPDIYADHTYTEQFGYESRYDEATMRELF 201
Query: 180 ------PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
PE+ K++P D +LW+ EP W++P+G GRPGWH+EC+A++++ LG+ F I
Sbjct: 202 AERGGDPEREGKRHPLDALLWRAHRTGEPEWDAPFGSGRPGWHVECAAIATNRLGEQFAI 261
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG+DL +PHHE A + A ++ A ++H G + LEG KMSKS GN ++ L
Sbjct: 262 QGGGVDLRYPHHEYSAAHAEAACGNQRMAGHYVHTGMIGLEGTKMSKSLGNLEFVSALTA 321
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGII 347
+ + IR+ + HYRE D++ + L EAE L+KW +
Sbjct: 322 ------QGFDPAAIRVGLYAGHYREDRDWSAEVLNEAEDRLAKWRAAAAEENNPQRVAEV 375
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
V L NDL+T S ++ L + A ++
Sbjct: 376 LATVTGHLANDLDTPSVLRTLDEWAAAVNES 406
>gi|118472573|ref|YP_888468.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|308197104|sp|A0QZY0|MSHC_MYCS2 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|118173860|gb|ABK74756.1| cysteinyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 412
Score = 227 bits (578), Expect = 4e-57, Method: Composition-based stats.
Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++ +R++ MYVCG T YD H+G+A + FD+++RL
Sbjct: 17 PALRLFDSADRQVRPVTP--GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDAG- 73
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD + ERA ++ + + TQ F +D L L P
Sbjct: 74 -HTVQYVQNVTDVDDPLFERAERDGID------WRTLGDRETQLFREDMAALRVLPPHDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+ I +++ +++ ++ G AY + D + + + +
Sbjct: 127 VAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K + D +LW+ P EP W SP+GRGRPGWH+ECSA++ +G DI
Sbjct: 187 ERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGLDIQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + + A ++H G + +G KMSKS GN + +++L
Sbjct: 247 GGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQL--- 303
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
+ IRL + HYRE ++ + L EA L++W + D +
Sbjct: 304 ---RAQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATDVIA 360
Query: 353 ---SALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNASAHILGIEV 396
L +DL+T A+ AL ++ + +LG+++
Sbjct: 361 RVRQYLADDLDTPKALAALDGWCTDALSYGGHDTESPRLVATTVDALLGVDL 412
>gi|219109269|pdb|3C8Z|A Chain A, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
Enzyme In The Mycothiol Biosynthetic Pathway
gi|219109270|pdb|3C8Z|B Chain B, The 1.6 A Crystal Structure Of Mshc: The Rate Limiting
Enzyme In The Mycothiol Biosynthetic Pathway
Length = 414
Score = 226 bits (577), Expect = 5e-57, Method: Composition-based stats.
Identities = 112/412 (27%), Positives = 187/412 (45%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++ +R++ MYVCG T YD H+G+A + FD+++RL
Sbjct: 19 PALRLFDSADRQVRPVTP--GPTATMYVCGITPYDATHLGHAATYLTFDLVHRLWLDAG- 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD + ERA ++ + + TQ F +D L L P
Sbjct: 76 -HTVQYVQNVTDVDDPLFERAERDGID------WRTLGDRETQLFREDMAALRVLPPHDY 128
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
AT+ I +++ +++ ++ G AY + D + + + +
Sbjct: 129 VAATDAIAEVVEMVEKLLASGAAYIVEDAEYPDVYFRADATAQFGYESGYDRDTMLTLFA 188
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K + D +LW+ P EP W SP+GRGRPGWH+ECSA++ +G DI
Sbjct: 189 ERGGDPDRPGKSDQLDALLWRAERPGEPSWPSPFGRGRPGWHVECSAIALTRIGTGLDIQ 248
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + + A ++H G + +G KMSKS GN + +++L
Sbjct: 249 GGGSDLIFPHHEYSAAHAESVTGERRFARHYVHTGMIGWDGHKMSKSRGNLVLVSQL--- 305
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-- 352
+ IRL + HYRE ++ + L EA L++W + D +
Sbjct: 306 ---RAQGVDPSAIRLGLFSGHYREDRFWSNEVLDEANARLARWRSATALPEAPDATDVIA 362
Query: 353 ---SALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNASAHILGIEV 396
L +DL+T A+ AL ++ + +LG+++
Sbjct: 363 RVRQYLADDLDTPKALAALDGWCTDALSYGGHDTESPRLVATTVDALLGVDL 414
>gi|256376329|ref|YP_003099989.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Actinosynnema mirum DSM 43827]
gi|310947170|sp|C6WIA0|MSHC_ACTMD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|255920632|gb|ACU36143.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Actinosynnema mirum DSM 43827]
Length = 412
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 123/410 (30%), Positives = 195/410 (47%), Gaps = 34/410 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++++T ++ R+YVCG T YD H+G+A + FD++ R+
Sbjct: 17 RPLRLHDTATGEVRPTAP--GDTARLYVCGITPYDATHLGHAATYLAFDLVQRVWLDNGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD ++ERA ++ D ++ + T F +D L LAP
Sbjct: 75 D--VHYVQNVTDVDDPLLERAARDQ------DDWVVLAMRETALFREDMEALRVLAPREY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFD--------TSSIPNYGSFSRRKIDEQK 174
A IP ++ +I+ ++ G AY +++ D + +
Sbjct: 127 VGAVESIPGIVDMIEKLLASGAAYRLDDDEYPDVYFPHDATPNFGYESNYDRETMLRLFA 186
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
P++ K++P D +LW+ + P EP WE+ G GRPGWHIECS ++ L FD+
Sbjct: 187 ERGGDPDRPGKRDPLDALLWRMARPGEPSWETSIGTGRPGWHIECSHIALANLDTPFDLQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL+FPHHE A + A + H G + L+G KMSKS GN + +++L T
Sbjct: 247 GGGSDLVFPHHEYSAAHAEALTGQHPFARHYAHAGMIGLDGEKMSKSRGNLVFVSKLRST 306
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDP 349
VIRLA+ HYRE +T + EA L+ W + + +
Sbjct: 307 ------GVDPGVIRLALFAGHYREDRPWTDELFAEAGTRLALWRSAADLESGPSVDDVVA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARES----TKNHDLLPIFN-ASAHILGI 394
V L NDL+T A+ AL ARE+ + + +F A +LGI
Sbjct: 361 RVREHLGNDLDTPKALAALDAWAREAWDRGGPDTEAPGVFRTAVDALLGI 410
>gi|311899990|dbj|BAJ32398.1| putative ATP-dependent L-cysteine--1D-myo-inosityl
2-amino-2-deoxy-alpha-D-glucopyranoside ligase
[Kitasatospora setae KM-6054]
Length = 409
Score = 226 bits (576), Expect = 5e-57, Method: Composition-based stats.
Identities = 119/340 (35%), Positives = 172/340 (50%), Gaps = 19/340 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++IY+T + E R+YVCG T YD H+G+A FD++ R+ + +
Sbjct: 19 LRIYDTATSSVREVVP-TGPTARLYVCGITPYDATHLGHAATYTTFDLVQRVWKDAGHD- 76
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TD+DD ++ERA + +++ + T F +D T L L P H
Sbjct: 77 -VLYVQNVTDVDDPLLERA------VATGQDWTVLAERETALFREDMTALRMLPPAHYIG 129
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR----RKIDEQKMGTRVP 180
A IP ++ L+Q ++ G AYE + ++ F S P +G S + + P
Sbjct: 130 AVESIPWIVPLVQRLLASGAAYEVDGDVYFSVESDPRFGEVSGLTREQMLPVFAERGGDP 189
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
E+ KKNP D +LW + P EP WE+ G GRPGWHIEC A++ +LG FDI GGG DL
Sbjct: 190 ERPGKKNPLDALLWLAARPGEPAWETELGHGRPGWHIECVAIALQFLGMDFDIQGGGSDL 249
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
FPHHE A + A A ++H G + L+G KMSKS GN + ++ L
Sbjct: 250 SFPHHEMGAAHAQVALGEHPYARAYVHAGMVGLDGHKMSKSRGNLVFVSAL------RRD 303
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T L A L+ W
Sbjct: 304 GVDPAAIRLALLAHHYRSDWEWTPADLDTALTRLAAWRDA 343
>gi|289641824|ref|ZP_06473981.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia symbiont of Datisca glomerata]
gi|289508349|gb|EFD29291.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia symbiont of Datisca glomerata]
Length = 413
Score = 226 bits (576), Expect = 6e-57, Method: Composition-based stats.
Identities = 123/408 (30%), Positives = 189/408 (46%), Gaps = 32/408 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++ +T R + + +RMYVCG T YD H+G+A + +D+ YR+L +
Sbjct: 19 LRVSDTATRAVR---PLAAGQTVRMYVCGITPYDATHLGHAFTYLTYDLAYRVLLDAGHD 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TD+DD + ERAR++ I T+ F D T L L P
Sbjct: 76 --VVYVQNVTDVDDPLFERARRDSLD------WREIARSQTELFRADMTALRILPPAVYA 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A IP +I LI+ + G AY +I F + P +G S E
Sbjct: 128 GAVESIPLVIELIEQLRDRGAAYPVEQDIYFPIGAAPRFGEVSHLSHAEMVTRAAGNGGD 187
Query: 184 ----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K +P D +LW+ EP W SP+G GRPGWHIEC+A++ +LG DI GGG D
Sbjct: 188 PRRAGKDDPLDPLLWRAERAGEPSWPSPFGPGRPGWHIECAAIALAHLGDSIDIQGGGTD 247
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHHE +A + A + A ++H ++L G KMSKS GN ++ LL
Sbjct: 248 LVFPHHECGVAHAEVASGVWPFARTYVHTAMVSLGGHKMSKSRGNLEFVSRLLRG----- 302
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL-----SA 354
IRLA+L + ++T + A L++W + D L
Sbjct: 303 -GVQPAAIRLALLDHRHTVGWEWTPGAIDTARDRLARWQAATAGASAPDARPLLDDVRRH 361
Query: 355 LYNDLNTVSAIQALHKLARESTK----NHDLLPIFNA-SAHILGIEVC 397
L +DL+ A+ A+ + A + + + + A +LG+++
Sbjct: 362 LADDLDAPGALAAVDRWAATALTVGGQDPEAPELARAIIDSLLGVDLD 409
>gi|193216531|ref|YP_001999773.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
gi|193001854|gb|ACF07069.1| cysteinyl-tRNA synthetase [Mycoplasma arthritidis 158L3-1]
Length = 401
Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats.
Identities = 136/420 (32%), Positives = 200/420 (47%), Gaps = 31/420 (7%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y+CGPTVY++ HIGN RP++ FD++ R RY + Y+ NITDIDDKII ++ +E
Sbjct: 6 YLCGPTVYNYPHIGNMRPIVTFDLMIRAQRYLG--DEIFYLHNITDIDDKIINKSLEE-- 61
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N + ITS + ++ T PT R T+ + M IQ +I AY+
Sbjct: 62 ----NKSEKEITSFYEKYYLNLFTLFNLEMPTKVIRVTDSLDDMYNYIQRLIDIKAAYQV 117
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ FD N + + + P DF LWK ++ + SP+
Sbjct: 118 GKNVFFDIEKYQNTYGSISNQKIANLNYDEDKFQKNN--PFDFALWKETSKG-IKFASPF 174
Query: 209 GRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
G GRPGWH ECS Y GK DIH GG+DLIFPHHENE Q + A W+H
Sbjct: 175 GEGRPGWHTECSCFIDKYFEGKTIDIHAGGIDLIFPHHENENIQHFALHH-QPIAKNWMH 233
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
G LN + +KMSKS GN I ++ LE + A +L ML T+Y +PI+ T + L
Sbjct: 234 FGTLNYKNQKMSKSIGNLIYPHDFLE-------KYEADTYKLLMLTTNYAKPINLTDEML 286
Query: 328 TEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
+ ++K+ ID ++ + + +++ +A +L + TK+ +
Sbjct: 287 VLNQNQINKFKVIASKCLLEKMHDSIDQEKVNHIIALIASLNFAKANEELIK-LTKSKEK 345
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
F A ILG + + K E+L Q+ + K F AD +R +L KG I
Sbjct: 346 YTTFIAIMKILGFNFASKTITKED----EELYQQWKNEVANKNFEQADTLRAKLIKKGLI 401
>gi|254385070|ref|ZP_05000404.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
gi|194343949|gb|EDX24915.1| cysteinyl-tRNA synthetase [Streptomyces sp. Mg1]
Length = 409
Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats.
Identities = 130/408 (31%), Positives = 198/408 (48%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +KI++T + + P + R+YVCG T YD HIG+A FD++ R+ +
Sbjct: 17 RDLKIHDTATQGT---ITLAPGPVARIYVCGITPYDATHIGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERALRDG------QDWTELAERETSLFREDMTALRMLPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE + +I F S PN+G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDIYFSVESDPNFGQVSHLDAQAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + P EP W+ + GRGRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPDRAGKKNPLDPMLWMAARPGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
IRLA+L HYR ++T + L EA L +W + + +
Sbjct: 301 -RRAGVDPAAIRLALLSHHYRADWEWTDEVLAEAVARLERWRAAVSRPDGLPADALVEEI 359
Query: 352 LSALYNDLNTVSAIQALHKLARESTK---NHDLLPIF--NASAHILGI 394
AL NDL+ A+ A+ + + + P A +LG+
Sbjct: 360 REALANDLDAPGALAAVDRWVDAQNASDGDDESAPGLVSRAVDALLGV 407
>gi|15609267|ref|NP_216646.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Rv]
gi|31793310|ref|NP_855803.1| cysteinyl-tRNA synthetase [Mycobacterium bovis AF2122/97]
gi|121638012|ref|YP_978236.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Pasteur
1173P2]
gi|148661945|ref|YP_001283468.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148823340|ref|YP_001288094.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis F11]
gi|167967870|ref|ZP_02550147.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|215403514|ref|ZP_03415695.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 02_1987]
gi|215411843|ref|ZP_03420627.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|215427508|ref|ZP_03425427.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T92]
gi|215431057|ref|ZP_03428976.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
gi|215446356|ref|ZP_03433108.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T85]
gi|218753852|ref|ZP_03532648.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis GM 1503]
gi|219558106|ref|ZP_03537182.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T17]
gi|224990506|ref|YP_002645193.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253798807|ref|YP_003031808.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
1435]
gi|254232288|ref|ZP_04925615.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
gi|254364936|ref|ZP_04980982.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
Haarlem]
gi|254551164|ref|ZP_05141611.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis '98-R604
INH-RIF-EM']
gi|260187126|ref|ZP_05764600.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
gi|260201240|ref|ZP_05768731.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis T46]
gi|260205422|ref|ZP_05772913.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis K85]
gi|289443634|ref|ZP_06433378.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Mycobacterium tuberculosis T46]
gi|289447756|ref|ZP_06437500.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
CPHL_A]
gi|289554084|ref|ZP_06443294.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
605]
gi|289570243|ref|ZP_06450470.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
gi|289574811|ref|ZP_06455038.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
gi|289745403|ref|ZP_06504781.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
02_1987]
gi|289750724|ref|ZP_06510102.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
gi|289754239|ref|ZP_06513617.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
gi|289758250|ref|ZP_06517628.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
gi|289762291|ref|ZP_06521669.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
1503]
gi|294993134|ref|ZP_06798825.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 210]
gi|297634716|ref|ZP_06952496.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN 4207]
gi|297731705|ref|ZP_06960823.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN R506]
gi|298525625|ref|ZP_07013034.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|306776378|ref|ZP_07414715.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu001]
gi|306780156|ref|ZP_07418493.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu002]
gi|306784900|ref|ZP_07423222.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu003]
gi|306789267|ref|ZP_07427589.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu004]
gi|306793596|ref|ZP_07431898.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu005]
gi|306797986|ref|ZP_07436288.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu006]
gi|306803865|ref|ZP_07440533.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu008]
gi|306808437|ref|ZP_07445105.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu007]
gi|306968261|ref|ZP_07480922.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu009]
gi|306972490|ref|ZP_07485151.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu010]
gi|307080200|ref|ZP_07489370.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu011]
gi|307084779|ref|ZP_07493892.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu012]
gi|313659040|ref|ZP_07815920.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis KZN V2475]
gi|54039653|sp|P67018|MSHC_MYCBO RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|54042274|sp|P67017|MSHC_MYCTU RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947194|sp|A1KKH3|MSHC_MYCBP RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947195|sp|C1AQ46|MSHC_MYCBT RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947201|sp|A5U4F6|MSHC_MYCTA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947202|sp|A5WPA3|MSHC_MYCTF RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947203|sp|C6DPT0|MSHC_MYCTK RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|3261823|emb|CAB10724.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium
tuberculosis H37Rv]
gi|31618902|emb|CAD97007.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis
AF2122/97]
gi|121493660|emb|CAL72135.1| Probable cysteinyl-tRNA synthetase CysS2 [Mycobacterium bovis BCG
str. Pasteur 1173P2]
gi|124601347|gb|EAY60357.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis C]
gi|134150450|gb|EBA42495.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis str.
Haarlem]
gi|148506097|gb|ABQ73906.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis H37Ra]
gi|148721867|gb|ABR06492.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis F11]
gi|224773619|dbj|BAH26425.1| cysteinyl-tRNA synthetase [Mycobacterium bovis BCG str. Tokyo 172]
gi|253320310|gb|ACT24913.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
1435]
gi|289416553|gb|EFD13793.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Mycobacterium tuberculosis T46]
gi|289420714|gb|EFD17915.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
CPHL_A]
gi|289438716|gb|EFD21209.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
605]
gi|289539242|gb|EFD43820.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis K85]
gi|289543997|gb|EFD47645.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T17]
gi|289685931|gb|EFD53419.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
02_1987]
gi|289691311|gb|EFD58740.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T92]
gi|289694826|gb|EFD62255.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis EAS054]
gi|289709797|gb|EFD73813.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis GM
1503]
gi|289713814|gb|EFD77826.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis T85]
gi|298495419|gb|EFI30713.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis 94_M4241A]
gi|308215167|gb|EFO74566.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu001]
gi|308326927|gb|EFP15778.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu002]
gi|308330361|gb|EFP19212.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu003]
gi|308334196|gb|EFP23047.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu004]
gi|308337992|gb|EFP26843.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu005]
gi|308341678|gb|EFP30529.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu006]
gi|308345168|gb|EFP34019.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu007]
gi|308349474|gb|EFP38325.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu008]
gi|308354105|gb|EFP42956.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu009]
gi|308358045|gb|EFP46896.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu010]
gi|308361985|gb|EFP50836.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu011]
gi|308365646|gb|EFP54497.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
SUMu012]
gi|323719283|gb|EGB28425.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
CDC1551A]
gi|326903745|gb|EGE50678.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis
W-148]
gi|328458569|gb|AEB03992.1| cysteinyl-tRNA synthetase 2 cysS2 [Mycobacterium tuberculosis KZN
4207]
Length = 414
Score = 226 bits (575), Expect = 8e-57, Method: Composition-based stats.
Identities = 124/414 (29%), Positives = 195/414 (47%), Gaps = 36/414 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y++ +R++ S MYVCG T YD H+G+A + FD+++RL
Sbjct: 17 PQLRLYDSADRQVRPVAP--GSKATMYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E YV+NITDIDD + ERA ++ + F +D L L P
Sbjct: 75 ELH--YVQNITDIDDPLFERADRDGVD------WRDLAQAEVALFCEDMAALRVLPPQDY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN------EIIFDTSSIPNYGSFSRRK----IDE 172
AT I +M+ LI+ ++ G AY + +I F + +G S +
Sbjct: 127 VGATEAIAEMVELIEKMLACGAAYVIDREMGEYQDIYFRADATLQFGYESGYDRDTMLRL 186
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFD 232
+ P + K + D +LW+ + P EP W SP+G GRPGWH+EC+A++ +G D
Sbjct: 187 CEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLD 246
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
I GGG DLIFPHHE A + C + A ++H G + +G KMSKS GN + ++ L
Sbjct: 247 IQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSAL- 305
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGII 347
+ +RL +L HYR ++ Q L EA L +W + + +
Sbjct: 306 -----RAQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHRWRTATALPAGPAAVDV 360
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLP---IFNASAHILGIEV 396
V L +DL+T AI AL ++ + HD + A +LG+++
Sbjct: 361 VARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVATAIDALLGVDL 414
>gi|227542084|ref|ZP_03972133.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
gi|227182135|gb|EEI63107.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51866]
Length = 442
Score = 225 bits (574), Expect = 1e-56, Method: Composition-based stats.
Identities = 122/418 (29%), Positives = 194/418 (46%), Gaps = 43/418 (10%)
Query: 8 YNTLERKITEF----------QAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRL 56
+++L + + + MYVCG T YD H+G+A + FD++YR
Sbjct: 39 FDSLTGTPVPLNLYDSADDRIKPVKAGKVATMYVCGITPYDATHLGHAATYLAFDLIYRQ 98
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L+ + V YV+N+TD+DD + ERA ++ N + + F D +L+
Sbjct: 99 LKANGHD--VHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSV 150
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
P + ++I ++Q +I G Y ++ D N + +
Sbjct: 151 FPPQDFVGVQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREE 210
Query: 177 TRVPEKYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
K++P D ++WK + P EP W++P+G GRPGWHIECSA++ + L
Sbjct: 211 MLDVFAERGGDPERPGKEDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLS 270
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FDI GGG DL+FPHHE A + A + A ++H G + L+G KMSKS GN + +
Sbjct: 271 VPFDIQGGGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFV 330
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTST 342
++LLE IRL++ HYR DF+ L + E L+ + T
Sbjct: 331 SKLLE------EGHTPAAIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRA 384
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLP---IFNASAHILGIEV 396
+ + AL +DL+T AI A+ A RE T + D + +A +LGI++
Sbjct: 385 EAEALVTEIREALADDLDTPRAIAAIEAWANREWTGDSDPEAGRIVASALDALLGIKL 442
>gi|258652959|ref|YP_003202115.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Nakamurella multipartita DSM 44233]
gi|310947206|sp|C8X8S1|MSHC_NAKMY RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|258556184|gb|ACV79126.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Nakamurella multipartita DSM 44233]
Length = 405
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 110/385 (28%), Positives = 177/385 (45%), Gaps = 30/385 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++Y++ ++ DP + MYVCG T YD H+G+A + FD+++R +
Sbjct: 17 RPLRLYDSATGEVR---PTDPGPVATMYVCGITPYDATHLGHAATYLAFDLVHR--MWLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+NITDIDD ++ERA+++ S + + F D T L + P
Sbjct: 72 AGHQVHYVQNITDIDDPLLERAQRDGVS------WRKLADREIGLFRDDMTALRVIPPAD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---- 177
A + ++ +Q +I G AY +E D + +
Sbjct: 126 YIGAVEAMDEVTAAVQELIDAGAAYRVPDEQYPDVYFDVTASGQFGYESRYDEATMLRLS 185
Query: 178 ----RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
P++ K+ D +LW+ P EP W SP G GRPGWHIEC+ ++ + +G V D+
Sbjct: 186 AERGGDPDRPGKRQRLDPLLWRVERPQEPSWSSPMGPGRPGWHIECAVIAGNRIGPVIDL 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + A + H G + L+G KMSKS GN + ++ LL
Sbjct: 246 QGGGSDLIFPHHECSAAHAEVLSGKRPFARHYTHAGMIGLDGEKMSKSRGNLVFVSRLLH 305
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ----RLTEAEILLSKWPQTSTSKGIIDP 349
+ +RL +L HYR+ ++ + + +T +
Sbjct: 306 ------QGVDPMAMRLGLLAGHYRQDRAWSDEVLTAAEARLARWRAAAARTGVDADSVVQ 359
Query: 350 AVLSALYNDLNTVSAIQALHKLARE 374
A+ L +DL+T + I+AL A +
Sbjct: 360 AIRDGLADDLDTPTVIEALDAWAAD 384
>gi|237785512|ref|YP_002906217.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
gi|310947182|sp|C4LIL9|MSHC_CORK4 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|237758424|gb|ACR17674.1| MshC ligase [Corynebacterium kroppenstedtii DSM 44385]
Length = 520
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 123/400 (30%), Positives = 197/400 (49%), Gaps = 36/400 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T R++T D + + YVCG T YD H+G+A + FDVL R L
Sbjct: 24 LHMWDTASREVTPLTPSDEATV--YVCGITPYDSTHLGHAATYVTFDVLNRQLLANG--H 79
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N+TD+DD + ERA+++ + + T F +D L + PT
Sbjct: 80 RVNFVQNVTDVDDPLFERAQRDGVD------WQELGEEQTDLFRQDMANLGVIPPTSYIG 133
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
A IP +I ++ ++ +G AY ++ ++ D ++ P +G SR +
Sbjct: 134 AVEAIPDVIDMVSTLLDNGSAYVVDDPTYPDVYADRTATPQFGYESRYDEATMEQFFAER 193
Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ K++P D +LW+ P EP W+SP+GRGRPGWHIEC+A+++ YLG FD+ GG
Sbjct: 194 GGDPDRPGKRDPLDSLLWRAERPGEPAWDSPFGRGRPGWHIECAAIAARYLGSHFDVQGG 253
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHE A A +E+ A+ ++H G + L G KMSKS GN + ++ L
Sbjct: 254 GEDLIFPHHEYSAAHVEAACGVERMADHYMHTGLIALGGVKMSKSLGNLVFVSRLCNA-- 311
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---------- 346
IRLA+ HYR+ +++ L A L+ W +
Sbjct: 312 ----GTDPSSIRLALYAGHYRDQRNWSDALLAAASRRLALWRTAVETVHAHNDADSEARA 367
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ V AL DL+T +A+ + + A + +
Sbjct: 368 RRLVDDVRQALATDLDTPAAVDLVDEWAGSIVDKEKIWDL 407
>gi|13432247|sp|Q49784|MSHC_MYCLE RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
Length = 412
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 123/413 (29%), Positives = 195/413 (47%), Gaps = 33/413 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++++Y+T +R++ A MYVCG T YD H+G+A + FD+++RL
Sbjct: 14 PELRLYDTSDRQVRPVSAAVAPTCKATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDL 73
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
E V YV+N+TD+DD + ERA + + + F D L L P
Sbjct: 74 GHE--VHYVQNVTDVDDPLFERADRNGVD------WRDLAEREVALFRDDMASLRILPPH 125
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRKIDEQ---- 173
AT I +++ L+ +++ G AY ++ +I F + +G S D
Sbjct: 126 DYVAATETIVEIVELVDKMLVSGAAYVIDDEYPDIYFRADATLQFGYESGYDRDTMLRLY 185
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ P + K D +LW+ + P EP W SP+G GRPGWH+EC+A++ +G DI
Sbjct: 186 EQSGGDPRRPGKNGELDALLWRAARPGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDI 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + C + A ++H G + + KMSKS GN + ++ L
Sbjct: 246 QGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTL-- 303
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIID 348
+ P IRL +L HYR ++ Q L +A L +W ++ +
Sbjct: 304 ----RAQGAPPSAIRLGLLAGHYRADRFWSSQLLDDAIARLHRWRTAASMPAGPDVADVI 359
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLP---IFNASAHILGIEV 396
V L +DL+T AI AL ++ + HD + A +LG+++
Sbjct: 360 ARVRGYLADDLDTPKAIAALDGWVTDALEYGGHDAAAPKLLATAIDALLGVDL 412
>gi|320011719|gb|ADW06569.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces flavogriseus ATCC 33331]
Length = 409
Score = 225 bits (573), Expect = 1e-56, Method: Composition-based stats.
Identities = 123/381 (32%), Positives = 194/381 (50%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDG------EDWTELAERETALFREDMTALRMLPPKH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE + ++ F S P++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVESDPHFGEVSNLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMTFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEHPFAKAYVHAGMVGLDGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAV 351
IRL +L HYR ++T Q L +A L++W + + V
Sbjct: 301 -RRADVDPAAIRLTLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLSADALVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL+T +A+ A+ + A
Sbjct: 360 REALADDLDTPAALAAVDRWA 380
>gi|76799584|ref|ZP_00781709.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
gi|76585067|gb|EAO61700.1| cysteinyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
Length = 351
Score = 224 bits (572), Expect = 2e-56, Method: Composition-based stats.
Identities = 121/362 (33%), Positives = 184/362 (50%), Gaps = 28/362 (7%)
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
++D L T PR +++ ++I ++ ++ AYEAN ++ F S +Y +
Sbjct: 1 MEDVAALGVKPATKNPRVIDYMDEIIDFVKVLVDKEFAYEANGDVYFRVSKSHHYAKLAN 60
Query: 168 RKIDEQKMGTRVPEK---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+ +++ ++G K+NP DF LWK + E WESPWG+GRPGWHIECS M++
Sbjct: 61 KTLEDLEIGASGRVDGEGEIKENPLDFALWKSAKSGEVSWESPWGKGRPGWHIECSVMAT 120
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
LG DIHGGG DL FPHH NEIAQS + AN W+HNGF+N++ KMSKS GN
Sbjct: 121 EILGDTIDIHGGGADLEFPHHTNEIAQSEAKTG-KTFANYWMHNGFVNVDNEKMSKSLGN 179
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-- 342
FIT++++L +S VIR + YR+P++FT + + +AE+ L T
Sbjct: 180 FITVHDML-------KSVDGQVIRFFLATQQYRKPVNFTEKAVHDAEVNLKYLKNTFNLP 232
Query: 343 --------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---DLLPIFNASAHI 391
A A+ +D NT + I + ++A+ H + F I
Sbjct: 233 IQENANDEELEQFVKAFQGAMDDDFNTANGITVIFEMAKWINSGHYTSRVKETFAELLEI 292
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
GI +E + IE L+++R + F++AD IR +L +G L D K+
Sbjct: 293 FGIVFQEE----VLDADIESLIEQRQEARANRDFATADRIRDELAKQGIKLLDTKDGVRW 348
Query: 452 QR 453
R
Sbjct: 349 TR 350
>gi|331697134|ref|YP_004333373.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Pseudonocardia dioxanivorans CB1190]
gi|326951823|gb|AEA25520.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Pseudonocardia dioxanivorans CB1190]
Length = 412
Score = 224 bits (571), Expect = 2e-56, Method: Composition-based stats.
Identities = 121/412 (29%), Positives = 200/412 (48%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T ++ MYVCG T YD H+G+A + FD++ R R
Sbjct: 17 PPLRLHDTSTGRVRPTAP--GPEATMYVCGITPYDATHLGHAATYLAFDLVNRYWRDLGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TDIDD ++ERA ++ D ++ + T F +D L + P H
Sbjct: 75 D--VHYVQNVTDIDDPLLERAARDQ------DDWVVLGMRETALFREDMEALRVVPPRHY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
A + ++ + ++ G AY ++ ++ FD+++ ++G S +R
Sbjct: 127 IGAVEAMGEIAEFVGKLLAGGSAYRIDDPEFPDVYFDSTASGHFGYESNYDEQTMIALSR 186
Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
P++ K++PAD +LW+ + EP WES G GRPGWH+EC+A++ + LG D++
Sbjct: 187 ERGGDPDRPGKRHPADALLWRMAREGEPSWESDLGAGRPGWHVECAAIALNRLGDQIDLN 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + + A ++H G + L+G KMSKS GN + +++L
Sbjct: 247 GGGSDLIFPHHEFGAAHAEAHTGVHPFARHYVHTGMIGLDGEKMSKSRGNLVFVSKLRAD 306
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
+RLA+L HYR +T L A+ L++W + T D
Sbjct: 307 D------VDPNAVRLALLSGHYRTDRAWTDDLLEAAQQRLARWREAVTLDAGPDATETVA 360
Query: 352 --LSALYNDLNTVSAI-----QALHKLARESTKNHDLLPIFNASAHILGIEV 396
+ L +DL+T A+ A L R T I A +LG+++
Sbjct: 361 NLRAHLADDLDTPRALAAVDAWAGAALERRGTDAAAPATIRTAVDALLGVKL 412
>gi|227488922|ref|ZP_03919238.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
gi|227091106|gb|EEI26418.1| cysteine--tRNA ligase [Corynebacterium glucuronolyticum ATCC 51867]
Length = 442
Score = 224 bits (570), Expect = 3e-56, Method: Composition-based stats.
Identities = 124/411 (30%), Positives = 198/411 (48%), Gaps = 36/411 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +Y++ + +I + + + MYVCG T YD H+G+A + FD++YR L+ +
Sbjct: 49 LNLYDSADDRI---KPVKAGKVATMYVCGITPYDATHLGHAATYLAFDLIYRQLKANGHD 105
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TD+DD + ERA ++ N + + F D +L+ P
Sbjct: 106 --VHYVQNVTDVDDPLFERAERD------NVDWRELGTSQIDLFRSDMEKLSVFPPQDFV 157
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ ++I ++Q +I G Y ++ D N + +
Sbjct: 158 GVQEAVDEVIDMVQELIDKGVVYAIDDPEYPDLYVRVNATEQFGYESRFSREEMLDVFAE 217
Query: 184 H--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
KK+P D ++WK + P EP W++P+G GRPGWHIECSA++ + L FDI G
Sbjct: 218 RGGDPERPGKKDPLDALVWKMARPGEPSWDAPFGAGRPGWHIECSAIARNRLSVPFDIQG 277
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL+FPHHE A + A + A ++H G + L+G KMSKS GN + +++LLE
Sbjct: 278 GGRDLVFPHHEFSAAHAEAATGEPRMAGHYVHGGMIALDGVKMSKSLGNLVFVSKLLE-- 335
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP------QTSTSKGIIDP 349
IRL++ HYR DF+ L + E L+ + T +
Sbjct: 336 ----EGHTPAAIRLSVFSGHYRADRDFSGAILKQCESLVERLRASVDKPSTRAETEALVT 391
Query: 350 AVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLP---IFNASAHILGIEV 396
+ AL +DL+T AI A+ A RE T + D + +A +LGI++
Sbjct: 392 EIREALADDLDTPRAIAAIEAWANREWTGDSDPEAGRIVASALDALLGIKL 442
>gi|328876354|gb|EGG24717.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 628
Score = 223 bits (569), Expect = 4e-56, Method: Composition-based stats.
Identities = 151/513 (29%), Positives = 228/513 (44%), Gaps = 79/513 (15%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ I N+L EF + + Y+CGPTVYD +H+G+AR I FDV+ R++R Y
Sbjct: 30 LFINNSLTMSKNEFVPSSGTKDVSWYICGPTVYDASHMGHARSYISFDVIRRIMRD-YMG 88
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YV NITDIDDKII RAR+ + + ++ F +D L L P
Sbjct: 89 FNIMYVMNITDIDDKIIIRARERGIT------HTELSRACEASFFEDMKALNVLPPDALT 142
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG--------SFSRRKIDEQKM 175
R T +I +++ ++ II +G AYE+N + FDT + + K++ +
Sbjct: 143 RVTEYITEIVTFVEKIIENGFAYESNGSVYFDTVAYSKQHDYGKLDPNAVGNEKLNSEGE 202
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
G K+N DF LWK+S +EP W SPWG GRPGWHIECSAM+S LG DIH
Sbjct: 203 GALSAAVSEKRNNNDFALWKKSKELEPKWNSPWGEGRPGWHIECSAMASDILGPNIDIHS 262
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHH+NEIAQS + ++ N +IH+G L ++G KMSKS NFITI E L
Sbjct: 263 GGEDLKFPHHDNEIAQSEAHYKCKQWINYFIHSGHLLIDGSKMSKSLKNFITIQEAL--- 319
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------- 347
+ + A +R+ L+ Y +P++++V+ +T A + + + I
Sbjct: 320 ----KKYTARQMRMLFLIHKYDKPMNYSVESMTNAIEIEKIFTEFFHLVKGIIRSTSIAG 375
Query: 348 ------------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------- 380
V + ++ NTV I L +L +S +
Sbjct: 376 EQNWEKADKELNAELQQAKRDVDKFIMDNFNTVDVIHRLKELISKSNIYINDKSRAPRVA 435
Query: 381 ----LLPIFNASAHILGI-----EVCKEHLNKNISIAI----EKLVQERLILLK---MKK 424
+ + G+ N+ + + +V R + K
Sbjct: 436 IIQGVADYVTYILRVFGLTEAGGVGFGVAGEGNVEETMTPMFDAIVDFRNQMRSLAIAKD 495
Query: 425 ----FSSADYIRKQ-LESKGFILEDYKNPDNGQ 452
+ D R L G ++D +
Sbjct: 496 TTKILQACDSFRDDVLPLHGVKIDDRATGSTWK 528
>gi|227549273|ref|ZP_03979322.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
44291]
gi|227078592|gb|EEI16555.1| cysteinyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
44291]
Length = 404
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 123/404 (30%), Positives = 197/404 (48%), Gaps = 32/404 (7%)
Query: 4 KIKIYNTLER--KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++K+Y+T ++ K + + MYVCG T YD H+G+A + FD++ R L
Sbjct: 18 ELKLYDTADQVVKPVDTTPNAHGEVGMYVCGITPYDSTHLGHAATYLTFDLVQRQLIANG 77
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+NITD+DD + ERA ++ + F D L + P
Sbjct: 78 --HRVHYVQNITDVDDPLFERAARDGVD------WRELGQSQIDLFRSDMGILGVIPPRD 129
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV- 179
A + ++I ++ ++ AY + +I + +G S +E +
Sbjct: 130 YIGAIESVNEVIEMVGKLLDASAAYRLDHGDIYASIDATAQFGYESNYSREEMETYFAER 189
Query: 180 ---PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ K++P D ++W+ EP W+SP+G GRPGWHIECSA++++ LG F I GG
Sbjct: 190 GGDPERPGKRDPLDALVWRGHRDGEPAWDSPFGPGRPGWHIECSAIATNRLGATFAIQGG 249
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE A + A R + A ++H G + L+G KMSKS GN + +++L E
Sbjct: 250 GSDLAFPHHEFSAAHAEAAYRQRRMATHYVHAGMIALDGVKMSKSLGNLVFVHKLTE--- 306
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDPA 350
+ A IRLA+ HYR DF+ L AE L++W ++
Sbjct: 307 ---KGHEASAIRLAVFAEHYRTDRDFSDAILVAAEQRLARWRDNLARPVGQVDAAVVVDK 363
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ +AL +DL+T +A++ + + A + I A +LG+
Sbjct: 364 LRAALADDLDTAAALRIIDEAAGDHEG-----AIARAIDGLLGV 402
>gi|227487324|ref|ZP_03917640.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227542745|ref|ZP_03972794.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51866]
gi|227092750|gb|EEI28062.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51867]
gi|227181511|gb|EEI62483.1| cysteinyl-tRNA synthetase [Corynebacterium glucuronolyticum ATCC
51866]
Length = 404
Score = 223 bits (568), Expect = 5e-56, Method: Composition-based stats.
Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 32/403 (7%)
Query: 5 IKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+++T ++++ E + MYVCG T YD H+G+A + FD+ R L
Sbjct: 19 LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQLLANG- 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 78 -HKVHYVQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMEILSVIPPCDY 130
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A + ++I ++Q ++ G AYE +I + +G S +
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190
Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ K++P D ++W+ EP W+SP+G GRPGWH+ECSA++++ LG F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE A + A ++E+ A ++H G + L+G KMSKS GN + +++L E
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA--- 307
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
IRLA+ HYRE DF+ L EAE L++W + + + +
Sbjct: 308 ---GHDPSAIRLAVFSGHYREDRDFSDAILAEAEERLARWREQLAGEVSEAGATDVVDKL 364
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ L +DLNT A+ L A + + I A +LG+
Sbjct: 365 RAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGV 402
>gi|269114835|ref|YP_003302598.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis]
gi|268322460|emb|CAX37195.1| Cysteinyl-tRNA synthetase [Mycoplasma hominis ATCC 23114]
Length = 401
Score = 223 bits (568), Expect = 6e-56, Method: Composition-based stats.
Identities = 137/421 (32%), Positives = 207/421 (49%), Gaps = 38/421 (9%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y+CGPTVY++ HIGN RP++ FD++ R R + V ++ NITDIDDKII +A+QE
Sbjct: 5 YLCGPTVYNYPHIGNLRPIVSFDLMIRAQRQLGED--VYFLHNITDIDDKIIAKAKQE-- 60
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N I+S ++ + P R T+ + M IQ++I G AY+
Sbjct: 61 ----NKTEKEISSFYEAYYLNLFKLFSIEMPNKIVRVTDSLNDMYEYIQSLIEKGAAYQV 116
Query: 149 NNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
N + FD YG S +K+ + K++P DF LWK +T ++SP
Sbjct: 117 NGNVYFDVLKFKDVYGKISNQKLANLISDSSNEVD--KRSPYDFALWKDTTEG-IKFQSP 173
Query: 208 WGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
+G GRPGWH ECS + Y GK DIHGGG+DLIFPHHENE Q + + A WI
Sbjct: 174 FGLGRPGWHTECSCFINKYFEGKQLDIHGGGIDLIFPHHENENIQHFAIN-RQDIAKDWI 232
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G LN + +KMSKS GN I E L +++ A +L ML T Y +PI+ T +
Sbjct: 233 HFGTLNYKNQKMSKSIGNIIYAEEFL-------KNYSADTYKLLMLSTSYSKPINITDEL 285
Query: 327 LT---------EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L EA S+ + + ++L+ A + L++ +
Sbjct: 286 LASLQKQINNIEAHFNKSQLEDIKYTLDKQIIDSILKNVSNLDFSLAFKQLNEQLKSPLN 345
Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+ +F +LG ++ + ++ + L ++ IL + K++ AD IR L++
Sbjct: 346 YGNAFFVFK----VLGFKLVENKVSNDDKE----LYRKWNILKEQKQYDKADEIRNILKT 397
Query: 438 K 438
K
Sbjct: 398 K 398
>gi|134098795|ref|YP_001104456.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|310947213|sp|A4FBV6|MSHC_SACEN RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|133911418|emb|CAM01531.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 412
Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 36/413 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++++T ++ + RMYVCG T YD H+G+A + FD+++R+
Sbjct: 17 RPLRLFDTAAGEVR---PVTAGRTARMYVCGITPYDATHLGHAATYLAFDLVHRIWLDNG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+N+TDIDD ++ERA ++ N+ ++ + T F +D L + PT
Sbjct: 74 HD--VHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A IP++ + ++ G AY +++ D + + + +
Sbjct: 126 FIGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLS 185
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K++P D +LW+ + EP WES G GRPGWH+ECS ++ + LG FD+
Sbjct: 186 AERGGDPDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFDV 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL FPHHE A + A + H G + L+G KMSKS GN + +
Sbjct: 246 QGGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFV----- 300
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIID 348
+ G IRLA+L HYR +T LT+ L++W + S +
Sbjct: 301 -SRLRGDRVDPMAIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPVV 359
Query: 349 PAVLSALYNDLNTVSAIQALHKLARES--TKNHDL---LPIFNASAHILGIEV 396
+ L +DL+T A+ A+ E+ + D I +A +LG+++
Sbjct: 360 ERLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 412
>gi|61216674|sp|Q8NQC4|MSHC_CORGL RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|21324282|dbj|BAB98907.1| Cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
Length = 404
Score = 223 bits (567), Expect = 6e-56, Method: Composition-based stats.
Identities = 120/418 (28%), Positives = 195/418 (46%), Gaps = 38/418 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
+++++T ++++ + + + MYVCG T YD H+G+A + FD++YR+L
Sbjct: 1 MPLELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL-- 58
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
+ V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 59 LDNDHDVHYVQNITDVDDPLFERAARDGVD------WRDLGTSQINLFRSDMEALSIIPP 112
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
A I ++I +++ ++ G AY + D + N + +
Sbjct: 113 KDYIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAE 172
Query: 180 PEKYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
KKNP D +LW+ + EP WESP+G GRPGWHIECSA++++ LG F
Sbjct: 173 FFAERGGDPERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSF 232
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
DI GGG DLIFPHHE A + A +E+ A ++H G ++ +G KMSKS GN ++ L
Sbjct: 233 DIQGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRL 292
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------ 345
IRL + HYR D+ + L AE L+ W + + +
Sbjct: 293 TAA------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAI 346
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
+ + + L DL+T A+ A+ A D + A +LG+++
Sbjct: 347 AVVEQLRAHLSADLDTPGALAAVDNWAAGIDTTTDSKEFTEVGNIVVAAIDALLGVQL 404
>gi|333028184|ref|ZP_08456248.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
gi|332748036|gb|EGJ78477.1| putative cysteinyl-tRNA synthetase [Streptomyces sp. Tu6071]
Length = 409
Score = 223 bits (567), Expect = 7e-56, Method: Composition-based stats.
Identities = 122/381 (32%), Positives = 188/381 (49%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + R+YVCG T YD H+G+A FD++ R+
Sbjct: 17 RDLRIHDTATNGPVTLTP---GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDSG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 74 --RQVHYVQNVTDVDDPLLERAVRDG------EDWTGLAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F +S ++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLCAMGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L +
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSKGNLVFVSRLRKD-- 303
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T + L EA L++W S + V
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ A+ A + A
Sbjct: 360 RDALADDLDSPRALLAFDRWA 380
>gi|21220159|ref|NP_625938.1| cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|256788729|ref|ZP_05527160.1| cysteinyl-tRNA synthetase [Streptomyces lividans TK24]
gi|289772623|ref|ZP_06532001.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces lividans TK24]
gi|61216726|sp|Q9ADA4|MSHC_STRCO RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|13620189|emb|CAC36366.1| putative cysteinyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289702822|gb|EFD70251.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces lividans TK24]
Length = 409
Score = 222 bits (566), Expect = 7e-56, Method: Composition-based stats.
Identities = 124/408 (30%), Positives = 201/408 (49%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGP---VTLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDGVD------WTALAEQETALFREDMTALRMLPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE ++ F + P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDVYFSVEADPHFGGVSHLDAATMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGTLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + +++L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVGLDGEKMSKSKGNLVFVSQL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRL +L HYR ++T Q L +A L +W + +
Sbjct: 301 -RREGVDPAAIRLTLLAHHYRSDWEWTDQVLQDALARLDRWRAAVSRPDGPPAEALVEEI 359
Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
AL NDL++ +A+ A+ + A ++ + D+ + A +LG+
Sbjct: 360 REALANDLDSPAALAAVDRWAALQQESGGTDIGAPGVVSRAVDALLGV 407
>gi|19552728|ref|NP_600730.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|62390397|ref|YP_225799.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum ATCC 13032]
gi|41325734|emb|CAF21523.1| PUTATIVE CYSTEINE TRNA SYNTHETASE [Corynebacterium glutamicum ATCC
13032]
Length = 420
Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats.
Identities = 120/416 (28%), Positives = 195/416 (46%), Gaps = 38/416 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++T ++++ + + + MYVCG T YD H+G+A + FD++YR+L
Sbjct: 19 LELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--LD 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 77 NDHDVHYVQNITDVDDPLFERAARDGVD------WRDLGTSQINLFRSDMEALSIIPPKD 130
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A I ++I +++ ++ G AY + D + N + +
Sbjct: 131 YIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEFF 190
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
KKNP D +LW+ + EP WESP+G GRPGWHIECSA++++ LG FDI
Sbjct: 191 AERGGDPERPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSFDI 250
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + A +E+ A ++H G ++ +G KMSKS GN ++ L
Sbjct: 251 QGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRLTA 310
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------II 347
IRL + HYR D+ + L AE L+ W + + + +
Sbjct: 311 A------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAIAV 364
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
+ + L DL+T A+ A+ A D + A +LG+++
Sbjct: 365 VEQLRAHLSADLDTPGALAAVDNWAAGIDTTTDSKEFTEVGNIVVAAIDALLGVQL 420
>gi|262202368|ref|YP_003273576.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Gordonia bronchialis DSM 43247]
gi|310947185|sp|D0LDR0|MSHC_GORB4 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|262085715|gb|ACY21683.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Gordonia bronchialis DSM 43247]
Length = 413
Score = 222 bits (566), Expect = 9e-56, Method: Composition-based stats.
Identities = 121/411 (29%), Positives = 183/411 (44%), Gaps = 34/411 (8%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++Y+T +R + +YVCG T YD H+G+A + FD + R+LR
Sbjct: 16 SPALRLYDTADRAVRPVAP--GPTATLYVCGITPYDATHLGHAATYVTFDQVNRVLRDQG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + S+ Q F D T L L P
Sbjct: 74 HD--VHYVQNITDVDDPLFERAERDGVD------WRELGSEQIQLFRDDMTALRVLPPRD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A + ++I ++ ++ G AY ++ D + + +
Sbjct: 126 YIGAMESVDEVIEAVEKLLASGAAYVVDDPEYPDVYFRTDATEQFGYESGYDRATMARFF 185
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K++P D +LW+ + EP WE+P+G GRPGWHIECSA++ + LG FDI
Sbjct: 186 AERGGDPDRAGKRDPLDAVLWRAARDGEPSWEAPFGPGRPGWHIECSAIALNRLGIEFDI 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 QGGGNDLIFPHHEFSAAHGEALTDSRRFARHYVHTGMVGLDGEKMSKSRGNLVFVSVL-- 303
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-- 351
IRLA+L HYR +T L A L +W + + D A
Sbjct: 304 ----RRDGVDPAAIRLALLADHYRSDRMWTDDVLATAVDRLQRWRTAAAAPAGPDAAPTV 359
Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKN-----HDLLPIFNASAHILGI 394
L +DL+T A+ A+ + I A +LG+
Sbjct: 360 ARLRQHLADDLDTPKALDAVDAWCADVRTGIGSDPAAPAQIARAVDALLGV 410
>gi|300934462|ref|ZP_07149718.1| cysteinyl-tRNA synthetase [Corynebacterium resistens DSM 45100]
Length = 438
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 116/436 (26%), Positives = 192/436 (44%), Gaps = 56/436 (12%)
Query: 3 KKIKIYNTLERKITEF-QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +Y+T + +I I MYVCG T YD H+G+A + FD++ R L
Sbjct: 17 PELCLYDTADDQIRPVSIPPAGKEIGMYVCGITPYDSTHLGHAATYLTFDLINRYLVAAG 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + F D L + P
Sbjct: 77 HQ--VHYVQNITDVDDPLFERAERDGVD------WRELGDSQIDLFRSDMEALQVIPPRD 128
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A + +++ ++ ++ G AY+ +++ D + + +
Sbjct: 129 YIGAIESVGEVVEMVGRLLEVGAAYQLSDDEFADIYADHTFTKQFGYESRYDASTMAELF 188
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K++P D +LW+ EP W++P+G GRPGWHIECSA++++ LG F I
Sbjct: 189 AERGGDPERPGKRHPMDALLWRAHREGEPQWDAPFGAGRPGWHIECSAIATNRLGPQFSI 248
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL FPHHE A + A E+ A+ ++H G + L+G KMSKS GN + +++L
Sbjct: 249 QGGGSDLRFPHHEFSAAHAEAAHGCERMADHYVHAGMIALDGVKMSKSLGNLVFVSKLTA 308
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-------------- 339
IRL + +HYR D++ + L AE L W +
Sbjct: 309 A------GHEPSAIRLGVYASHYRTDRDWSDEVLATAEQRLRLWREALLALSNHAEKALA 362
Query: 340 ------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------HD 380
S I V + + +DL+T +A+ + + A+E+ K D
Sbjct: 363 ETEETKDSRTNSAPGSAPQIVQTVRAHIAHDLDTPAALATVDQWAQETIKAATSEGLSED 422
Query: 381 LLPIFNASAHILGIEV 396
+ + GI++
Sbjct: 423 PTAVKRGLDTLFGIDL 438
>gi|32479379|ref|NP_862232.1| cysteinyl-tRNA synthetase [Corynebacterium striatum]
gi|81324595|sp|Q9FB57|MSHC_CORST RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|9945792|gb|AAG03366.1| CysS [Corynebacterium striatum]
Length = 404
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 32/403 (7%)
Query: 5 IKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+++T ++++ E + MYVCG T YD H+G+A + FD+ R L
Sbjct: 19 LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQLLANG- 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 78 -HKVHYVQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMEILSVIPPCDY 130
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A + ++I ++Q ++ G AYE +I + +G S +
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190
Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ K++P D ++W+ EP W+SP+G GRPGWH+ECSA++++ LG F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE A + A ++E+ A ++H G + L+G KMSKS GN + +++L E
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA--- 307
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
IRLA+ HYRE DF+ L EAE L++W + + + +
Sbjct: 308 ---GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDKL 364
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ L +DLNT A+ L A + + I A +LG+
Sbjct: 365 RAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGV 402
>gi|254823397|ref|ZP_05228398.1| cysteinyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 400
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 119/385 (30%), Positives = 190/385 (49%), Gaps = 28/385 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T +R++ S MYVCG T YD H+G+A + FD++YR ++
Sbjct: 6 PELRLYDTSDRQVRPVA--SGSTATMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDL 61
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TD+DD ++ERA ++ + + F +D T L LAP
Sbjct: 62 GHDVHYVQNVTDVDDPLLERAERDGID------WRELAQREVSLFREDMTALRMLAPREY 115
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRK----IDEQKM 175
AT I +++ L++ ++ G AY +I + + P +G S +
Sbjct: 116 VGATEAIAEVVELVEKMLASGAAYVVEGEYPDIYYRADATPQFGYESGYDRETMLRLFSE 175
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
P++ K + D +LW+ + P EP W SP+G GRPGWH+EC+A++ +G DI G
Sbjct: 176 RGGDPQRPGKTDQLDALLWRAARPGEPSWPSPFGDGRPGWHVECAAIALSRIGSGLDIQG 235
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + C + A ++H G + +G KMSKS GN + ++ L
Sbjct: 236 GGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTL---- 291
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPA 350
+ A IRL +L HYR ++ Q L EA L +W + +
Sbjct: 292 --RAQGVEAAAIRLGLLAGHYRGDRYWSQQVLDEAVARLQRWRTATALPTGPDAADVIAR 349
Query: 351 VLSALYNDLNTVSAIQALHKLARES 375
V L +DL+T A+ AL + ++
Sbjct: 350 VRQYLADDLDTPKALAALDGWSTDA 374
>gi|54024903|ref|YP_119145.1| cysteinyl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|61216443|sp|Q5YVL0|MSHC_NOCFA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|54016411|dbj|BAD57781.1| putative ATP-dependent L-cysteine:1D-myo-inosityl
2-amino-2-deoxy-alpha-D-glucopyranoside ligase [Nocardia
farcinica IFM 10152]
Length = 412
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 115/412 (27%), Positives = 192/412 (46%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T +R++ + MYVCG T YD H+G+A + FD++ R+LR
Sbjct: 17 PPLRLYDTADRQVRPVAP--GATATMYVCGITPYDATHLGHAATYLTFDLVNRVLRDGGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD + ERA ++ + S+ + F D L L P
Sbjct: 75 D--VHYVQNVTDVDDPLFERAARDGVD------WRELGSREIELFRTDMAALRVLPPREY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A + +++ +Q ++ +G AY ++ D + + +
Sbjct: 127 VGAVESVEEVVEFVQKLLANGAAYVVDDPDFPDIYFRTDATEQFGYESGYDRATMERLFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ + P EP W +P+G GRPGWHIECSA++ + LG FDI
Sbjct: 187 ERGGDPDRPGKRDPLDALLWRAARPGEPSWPAPFGAGRPGWHIECSAIALNRLGPEFDIQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLI+PHHE A + + A ++H G + L+G KMSKS GN + ++ L +
Sbjct: 247 GGGSDLIYPHHEYSAAHAESVVAGRRFARHYVHAGLIGLDGEKMSKSRGNLVLVSTLRKD 306
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDP 349
IRL +L HYR+ +T L A L++W + +
Sbjct: 307 ------GVDPAAIRLGLLDGHYRQDRMWTDAVLEAALARLARWRSATALSAGPAAHDTIA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARES-----TKNHDLLPIFNASAHILGIEV 396
+ L +DL++ A+ A+ E+ + + I A +LG+ +
Sbjct: 361 RLRQHLADDLDSPKALAAVDNWVTEALDYGGSDSGAPAAIAEAVDALLGVRL 412
>gi|291005851|ref|ZP_06563824.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 404
Score = 222 bits (565), Expect = 1e-55, Method: Composition-based stats.
Identities = 116/413 (28%), Positives = 193/413 (46%), Gaps = 36/413 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++++T ++ + RMYVCG T YD H+G+A + FD+++R+
Sbjct: 9 RPLRLFDTAAGEVR---PVTAGRTARMYVCGITPYDATHLGHAATYLAFDLVHRIWLDNG 65
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+N+TDIDD ++ERA ++ N+ ++ + T F +D L + PT
Sbjct: 66 HD--VHYVQNVTDIDDPLLERANRD------NEDWVVLAMRETALFREDMEALRVVPPTD 117
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A IP++ + ++ G AY +++ D + + + +
Sbjct: 118 FIGAVESIPEIEEAVGKLLASGAAYRVDDDEYPDVYFRHSATGRFGYESNYDEATMLDLS 177
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K++P D +LW+ + EP WES G GRPGWH+ECS ++ + LG FD+
Sbjct: 178 AERGGDPDRKGKEHPLDALLWRMARDGEPSWESELGPGRPGWHLECSVIALNRLGMGFDV 237
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL FPHHE A + A + H G + L+G KMSKS GN + +
Sbjct: 238 QGGGSDLAFPHHEFSAAHAEALAGDHPFARHYCHAGMIGLDGEKMSKSKGNLVFV----- 292
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIID 348
+ G IRLA+L HYR +T LT+ L++W + S +
Sbjct: 293 -SRLRGDRVDPMAIRLALLDGHYRSDRSWTADALTKGSARLARWREAVALEAGPSAEPVV 351
Query: 349 PAVLSALYNDLNTVSAIQALHKLARES--TKNHDL---LPIFNASAHILGIEV 396
+ L +DL+T A+ A+ E+ + D I +A +LG+++
Sbjct: 352 ERLRDRLSDDLDTERALLAVDAWVDEALCRRGGDAEAPAAIRDAVDGLLGVQL 404
>gi|302561530|ref|ZP_07313872.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
gi|302479148|gb|EFL42241.1| conserved hypothetical protein [Streptomyces griseoflavus Tu4000]
Length = 409
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 126/408 (30%), Positives = 198/408 (48%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + +DP + R+YVCG T YD HIG+A FD++ R+ +
Sbjct: 17 RDLRIHDTATG---DLVTLDPGPVARIYVCGITPYDATHIGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAERDGLD------WTALAERETALFREDMTALRMLPPRQ 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G YE + +I F + P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRELGATYELDGDIYFSVEADPHFGEVSHLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KK+P D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKDPVDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLVFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSTL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T Q L +A L W + +
Sbjct: 301 -RRDGVDPAAIRLALLAHHYRADWEWTDQVLQDAVTRLDHWRAAVSRPDGPPADALVEEI 359
Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
AL DLN +A+ A+ + A +E + D+ + A +LG+
Sbjct: 360 REALAGDLNAPAALAAVDRWAVLQEESGGTDIGAPGVVSRAVDALLGV 407
>gi|295839782|ref|ZP_06826715.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. SPB74]
gi|197697718|gb|EDY44651.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. SPB74]
Length = 409
Score = 221 bits (564), Expect = 1e-55, Method: Composition-based stats.
Identities = 121/381 (31%), Positives = 190/381 (49%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + R+YVCG T YD H+G+A FD++ R+
Sbjct: 17 RDLRIHDTATDGPVTLTP---GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDSG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 74 --RQVHYVQNVTDVDDPLLERAVRDG------EDWTGLAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F +S ++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRERGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ G GRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGDGRPGWHIECVAIALDHLGMAFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + +++L +
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSRGNLVFVSQLRKD-- 303
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T + L EA L++W T + V
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGTPAETLVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ A++A+ + A
Sbjct: 360 RDALADDLDSPRALRAIDRWA 380
>gi|108800119|ref|YP_640316.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119869247|ref|YP_939199.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
gi|126435744|ref|YP_001071435.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
gi|123070011|sp|Q1B774|MSHC_MYCSS RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947199|sp|A3Q1B7|MSHC_MYCSJ RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|310947200|sp|A1UHV1|MSHC_MYCSK RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|108770538|gb|ABG09260.1| cysteinyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119695336|gb|ABL92409.1| cysteinyl-tRNA synthetase [Mycobacterium sp. KMS]
gi|126235544|gb|ABN98944.1| cysteinyl-tRNA synthetase [Mycobacterium sp. JLS]
Length = 415
Score = 221 bits (564), Expect = 2e-55, Method: Composition-based stats.
Identities = 115/411 (27%), Positives = 191/411 (46%), Gaps = 36/411 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++Y++ +R++ + MYVCG T YD H+G+A + FD+++RL
Sbjct: 17 PQLRLYDSADRQVR---PVSAGDTATMYVCGITPYDATHLGHAATYLAFDLVHRLWLDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+NITD+DD + ERA ++ + ++ Q F +D L L P
Sbjct: 74 --HRVHYVQNITDVDDPLFERAARDGID------WRDLGAREIQLFREDMAALRVLPPHD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
AT+ I ++I L++ ++ G AY ++ ++ + + +G S +
Sbjct: 126 YVAATDAIAEVIELVEKMLASGAAYVVDDPEFPDVYYRADATVQFGYESNYDHETMLTLF 185
Query: 178 RVPEKY----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K + D +LW+ P EP W SP+G GRPGWH+EC+A++ +G DI
Sbjct: 186 AERGGDPDRAGKADELDALLWRAERPGEPSWPSPFGPGRPGWHVECAAIALSRIGTGLDI 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + + A ++H G + +G KMSKS GN + +
Sbjct: 246 QGGGSDLIFPHHEFSAAHAESVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLV----- 300
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIID 348
+ IRL +L HYRE ++ L++A+ L +W + + +
Sbjct: 301 -SRLRAEGVDPSAIRLGLLAGHYREDRFWSDDVLSDAQTRLQRWRRATSLPTGPDATDVL 359
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGI 394
V + L +DL+T A+ AL E+ + A +LG+
Sbjct: 360 ARVRTYLADDLDTPKALIALDAWCTEALDGGGSDVTAPKTVATAVDALLGV 410
>gi|296139847|ref|YP_003647090.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Tsukamurella paurometabola DSM 20162]
gi|310947226|sp|D5UPJ5|MSHC_TSUPD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|296027981|gb|ADG78751.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Tsukamurella paurometabola DSM 20162]
Length = 414
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 118/385 (30%), Positives = 183/385 (47%), Gaps = 31/385 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y+T ++ + +++P + MYVCG T YD H+G+A + FD++ R+LR E
Sbjct: 19 LRLYDTSDQAVR---SVNPGAVSGMYVCGITPYDATHLGHAATYLTFDLINRVLRANGHE 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TD+DD + ERA ++ + ++ T F +D L LAP
Sbjct: 76 --VHYVQNVTDVDDPLFERAARDGID------WRDLGARETDLFCEDMQALRVLAPQDYI 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A I ++I L+ ++ +G AY ++ D + + +
Sbjct: 128 GAVESIDEVIALVGRLLENGAAYIVDDPEFPDVYYRTDATEQFGYESGYDRATMERFFAE 187
Query: 184 H--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K++P D +LW+ + P EP W SP G GRPGWHIEC+A++ + LG FDI G
Sbjct: 188 RGGDPDRPGKRDPLDALLWRAARPGEPSWPSPQGPGRPGWHIECAAIAQNRLGVGFDIQG 247
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + A ++H + L+G KMSKS GN + ++ L
Sbjct: 248 GGSDLIFPHHEFSAAHVEADTGERRFARHYVHAAMIGLDGEKMSKSRGNLVFVSTL---- 303
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--- 352
IRL + HYR ++ + L A+ L W + D A L
Sbjct: 304 --RRAGVDPAAIRLGLFEGHYRTDRAWSDEVLARAQARLDLWRNAFAAASSPDGAELVGR 361
Query: 353 --SALYNDLNTVSAIQALHKLARES 375
L +DL+T A+ AL A +
Sbjct: 362 LRRYLADDLDTPKALSALDAWAHRA 386
>gi|169629202|ref|YP_001702851.1| cysteinyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
gi|310947193|sp|B1MPE6|MSHC_MYCA9 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|169241169|emb|CAM62197.1| Cysteinyl-tRNA synthetase (CysS) [Mycobacterium abscessus]
Length = 412
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 117/412 (28%), Positives = 186/412 (45%), Gaps = 34/412 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++Y+T +R++ MYVCG T YD H+G+A + FD++YR ++
Sbjct: 17 PQLRLYDTADRQVRPVT--TGPTATMYVCGITPYDATHLGHAATYLTFDLIYR--QWLDA 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+N+TDIDD + ERA ++ + + T+ F D T L L P
Sbjct: 73 GLDVHYVQNVTDIDDPLFERADRDGID------WRELGDRETELFRGDMTALRVLPPREY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT I +I L++ ++ G AY ++ D + +
Sbjct: 127 VRATESIACIIELVEKMLASGAAYVVDDPEYPDVYFRVDATEQFGYESGYDIETMSRLFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K N D +LW+ + P EP WE+ +G GRPGWH+ECSA+ LG DI
Sbjct: 187 ERGGDPGRPGKANELDALLWRAARPGEPSWEASFGPGRPGWHVECSAIVLRELGAGIDIQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + + A ++H G + +G KMSKS GN L++
Sbjct: 247 GGGSDLIFPHHEYSAAHAEAVTAQRRFARHYVHAGMIGWDGHKMSKSRGN------LVKV 300
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDP 349
+ +RL +L HYR ++ L +A+ L++W +
Sbjct: 301 SGLTAQGVDPAAVRLGLLAGHYRADRSWSDAVLADAQGRLARWRHAVALSAAPSARDVVA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK-----NHDLLPIFNASAHILGIEV 396
V L +DL+T +A+ AL ++ + +A +LG+++
Sbjct: 361 RVRRYLADDLDTPNALAALDNWVTDALAYGGHDAAAGAQVRDAVDALLGVQL 412
>gi|153217385|ref|ZP_01951136.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
gi|124113603|gb|EAY32423.1| cysteinyl-tRNA synthetase [Vibrio cholerae 1587]
Length = 314
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 116/328 (35%), Positives = 164/328 (50%), Gaps = 37/328 (11%)
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
S YG S++ +D+ + G RV + K++P DF+LWK S P EP WESPWG GRPGW
Sbjct: 1 MSQYSEYGKLSKQDLDQLQAGARVDIEAAKRSPLDFVLWKMSKPGEPTWESPWGPGRPGW 60
Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
HIECSAM+S LG FDIHGGG DL FPHHENEIAQSCCA + N W+H+G + ++
Sbjct: 61 HIECSAMNSSILGNHFDIHGGGSDLQFPHHENEIAQSCCAHDTQ-YVNTWMHSGMVMVDK 119
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
KMSKS GNF TI ++L + A +R ++ HYR ++++ + L +A L
Sbjct: 120 EKMSKSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLE 172
Query: 336 KWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------N 378
+ +A+ +D NT A L +ARE +
Sbjct: 173 RLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNA 232
Query: 379 HDLLPIFNASAHILGIEVCKEH------LNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
L + A ++GI + + IE L++ R K +++AD R
Sbjct: 233 SALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLAR 292
Query: 433 KQLESKGFILEDYKNPDNGQRMTRWKQK 460
+L G +LED N T W++K
Sbjct: 293 DKLNEMGIVLEDGPN------GTTWRRK 314
>gi|172039961|ref|YP_001799675.1| cysteinyl-tRNA synthetase [Corynebacterium urealyticum DSM 7109]
gi|310947167|sp|B1VEQ2|MSHC1_CORU7 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
ligase 1; Short=MSH ligase 1
gi|171851265|emb|CAQ04241.1| unnamed protein product [Corynebacterium urealyticum DSM 7109]
Length = 404
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 124/403 (30%), Positives = 198/403 (49%), Gaps = 32/403 (7%)
Query: 5 IKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+++T ++++ E + MYVCG T YD H+G+A + FD+ R L
Sbjct: 19 LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQLLANG- 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 78 -HKVHYVQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMEILSVIPPRDY 130
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A + ++I ++Q ++ G AYE +I + +G S +
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190
Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ K++P D ++W+ EP W+SP+G GRPGWH+ECSA++++ LG F I GGG
Sbjct: 191 GDPDREGKRDPLDALVWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE A + A ++E+ A ++H G + L+G KMSKS GN + +++L E
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA--- 307
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
IRLA+ HYRE DF+ L EAE L++W + + + +
Sbjct: 308 ---GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDKL 364
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ L +DLNT A+ L A + + I A +LG+
Sbjct: 365 RAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGV 402
>gi|288923721|ref|ZP_06417819.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia sp. EUN1f]
gi|288344927|gb|EFC79358.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Frankia sp. EUN1f]
Length = 401
Score = 221 bits (563), Expect = 2e-55, Method: Composition-based stats.
Identities = 107/323 (33%), Positives = 162/323 (50%), Gaps = 19/323 (5%)
Query: 21 IDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
+ P +YVCG T YD H+G+A + +D++ R+LR E V YV+N+TD+DD +
Sbjct: 4 LRPGPTASLYVCGITPYDATHLGHAFTYLTYDLVQRVLRDAGHE--VRYVQNVTDVDDPL 61
Query: 80 IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
+ERA ++ + + F D T L L P H +P ++ +I +
Sbjct: 62 LERADRDGID------WRDLARREIDLFRADMTALRVLPPDHYVGVVEAVPLIVEMIGQL 115
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVPEKYHKKNPADFILWK 195
+ G AY ++ F SS +G + + P + KK+P D +LW+
Sbjct: 116 VERGAAYSVEGDLYFSVSSAKEFGEVAGLSPAQMLALAAERGGDPGRPGKKDPLDPLLWR 175
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
P EP W SP+G GRPGWH+ECSA++ H+LG DI GGG DL+FPHHE A + A
Sbjct: 176 AERPGEPSWPSPFGPGRPGWHVECSAIARHHLGAPIDIQGGGSDLVFPHHECSAAHAEVA 235
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
A ++H + L+G KMSKS GN ++ LL IRLA+L H
Sbjct: 236 GGTAPFARAYVHTAMVGLDGHKMSKSRGNLEFVSRLLAG------GADPAAIRLALLHHH 289
Query: 316 YREPIDFTVQRLTEAEILLSKWP 338
+ ++T L A++++ +W
Sbjct: 290 HTVEWEWTPADLPAADLMVRRWR 312
>gi|311739444|ref|ZP_07713279.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
gi|311305260|gb|EFQ81328.1| cysteine--tRNA ligase [Corynebacterium pseudogenitalium ATCC 33035]
Length = 415
Score = 221 bits (562), Expect = 2e-55, Method: Composition-based stats.
Identities = 120/410 (29%), Positives = 203/410 (49%), Gaps = 32/410 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++Y++ + I + + MYVCG T YD H+G+A + FD++YR
Sbjct: 21 QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRAFLDAG-- 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
K V YV+NITD+DD + ERA ++ + + F D L+ P
Sbjct: 78 KKVHYVQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRSDMELLSVFPPQDYI 131
Query: 124 RATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
A + +++ ++Q ++ G AY + +I + +G S +E +
Sbjct: 132 GAMEAVDEVVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYESNYSAEEMRTFFAE 191
Query: 180 ----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
P++ KKNP D ++W+ EP W+SP+G GRPGWHIECSA++++ LG FDI G
Sbjct: 192 RGGDPDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGSTFDIQG 251
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE A + A +E+ A ++H G + L+G KMSKS GN + +++L+
Sbjct: 252 GGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLV--- 308
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDP 349
G IRL + HYR+ D++ + L A+ L+ W + +
Sbjct: 309 ---GAGEDPSAIRLGVFAGHYRDERDWSDEALDAAKRRLAAWREALAQPGSMAGAEGVVA 365
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAH-ILGIEV 396
+ +A+ NDL+T +A+ A+ + A + + + + +LG++
Sbjct: 366 KLRAAIANDLDTPAALAAVDEWAEADRGTDEDGAADLVRTALNSLLGVQA 415
>gi|308450233|ref|XP_003088225.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
gi|308248740|gb|EFO92692.1| hypothetical protein CRE_17704 [Caenorhabditis remanei]
Length = 364
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 140/376 (37%), Positives = 199/376 (52%), Gaps = 37/376 (9%)
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSF 165
D L CLAP PRATN+I QM +I N++ G AY + N ++ F+ NYG
Sbjct: 1 MNDDAENLGCLAPDEAPRATNYIDQMQNMIGNLVNKGTAYPSANGDVYFEVEKFENYGRL 60
Query: 166 SRRKIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
S RK+D+ + RV + KK+P DF+LWK + EP W SPWG GRPGWHIECSAMS
Sbjct: 61 SGRKLDDMQAGASERVDVEVEKKHPFDFVLWKHAKENEPSWASPWGNGRPGWHIECSAMS 120
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+ LG FDIHGGG DL+FPHHENEIAQS A E+ N W+H GF+N++G KMSKS G
Sbjct: 121 TCCLGNHFDIHGGGSDLLFPHHENEIAQSEAATD-EQYVNYWMHVGFINVDGEKMSKSLG 179
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL-SKWPQTST 342
NF TI +++E + VIR ++ +HYR +DF+ L EA++
Sbjct: 180 NFFTIRDVME-------KFHPEVIRYFIVSSHYRSRVDFSDFALKEAKLRFLVFIMHLKR 232
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILG 393
+ +++ +D NT AI L ++ +E + +ILG
Sbjct: 233 INKSMAIKPQTSMRDDFNTSEAIAVLFEIIKELNRAVKEENAAQSTLYYSTLRHLTNILG 292
Query: 394 I------EVCKEHLNKN----ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ + K + + IE +Q+R+ K K F+ AD IR+ L ++G +LE
Sbjct: 293 LVQYNVDDFLKSDIGQEALGLSEADIEDFIQQRVDAKKNKDFARADEIRQSLLAQGVVLE 352
Query: 444 DYKNPDNGQRMTRWKQ 459
D + + T W++
Sbjct: 353 DTR------QGTIWRR 362
>gi|271967212|ref|YP_003341408.1| cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
gi|310947222|sp|D2AU10|MSHC_STRRD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|270510387|gb|ACZ88665.1| Cysteine--tRNA ligase [Streptosporangium roseum DSM 43021]
Length = 407
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 120/406 (29%), Positives = 195/406 (48%), Gaps = 31/406 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T ++ Q R+YVCG T YD H+G+A + FD++ RL R E
Sbjct: 19 LRLFDTAAGEVGPTQP--GPTARLYVCGITPYDATHLGHANTYLAFDLVNRLWRDAGHE- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + +N TD+DD ++ERA Q + + + F D L L P
Sbjct: 76 -VHFTQNATDVDDPLLERAEQTGQD------WRELAEREIELFRTDMEALRILPPREYVG 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVP 180
T I Q+ LI+ + G Y+ + ++ FD ++ P +G+ S + P
Sbjct: 129 VTEVIDQVAELIELLRDKGATYDLDGDLYFDVAAAPKFGAVSGYSEERMLDLFGQRGGDP 188
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ KK+P D++LW+ P EP W SP+G+GRPGWHIEC+A++ LG FD+ GGG DL
Sbjct: 189 DRAGKKHPLDWLLWRAERPGEPSWPSPFGQGRPGWHIECTAIALANLGSGFDVAGGGSDL 248
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
IFPHHE + A A ++H G + L+G KMSKS GN + ++ L +
Sbjct: 249 IFPHHECGAHEGHVACGEWPFAKAYVHAGMVALDGEKMSKSKGNLVFVSRL-------RK 301
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGIIDPAVLSAL 355
IRLA+L HYR ++T +L AE+ L++W + + + +
Sbjct: 302 EADPMAIRLALLAHHYRSDWEWTADQLASAEVRLARWRSAVGLPAGPEAETVLAELRARM 361
Query: 356 YNDLNTVSAIQALHKLAREST----KNHDLLPIFNAS-AHILGIEV 396
+DL+ A+ + A + + + +LG+E+
Sbjct: 362 TDDLDAPGALAVVDAWADRALAGGGTDPGAPALVRDIVDALLGVEL 407
>gi|281425990|ref|ZP_06256903.1| cysteine--tRNA ligase [Prevotella oris F0302]
gi|281399883|gb|EFB30714.1| cysteine--tRNA ligase [Prevotella oris F0302]
Length = 421
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 118/417 (28%), Positives = 181/417 (43%), Gaps = 47/417 (11%)
Query: 76 DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
DDKI ++AR E I T ++ L L P+ +P AT HI + L
Sbjct: 9 DDKIEKKARLEQLE------PMEIAQYYTNRYHAAMEALNVLPPSIEPHATGHIIEQEEL 62
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGS---FSRRKIDEQKMGTRVPEKYHKKNPA-DF 191
++ I+ +G+AYE+N I FD S R + + +R + +K DF
Sbjct: 63 VKEILKNGYAYESNGSIYFDVEKYDKEHKYGILSGRNLTDMINNSRELQGVGEKKNQVDF 122
Query: 192 ILWKRSTPME-PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
LWK++ P W SPW G PGWH EC+AM YLG FDIHGGG+DLIFPHHE EIA
Sbjct: 123 ALWKKAQPEHIMRWPSPWSIGFPGWHCECTAMGRKYLGSHFDIHGGGMDLIFPHHECEIA 182
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG-GRSWPAPVIRL 309
Q+ + ++ + W+HN + + G+KM KS GNFIT+ + +++ IR
Sbjct: 183 QAVASQG-DQMVHYWMHNNMITINGQKMGKSLGNFITLEQFFTGNHASLTQAYTPMTIRF 241
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----------------PAVL 352
+L HYR +DF+ + L A+ + +
Sbjct: 242 FILSAHYRGTVDFSNEALEAAQKGYERLMNAFDDLERVPVSSHCDAKTDKFVRTFRQRCY 301
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------------SAHILGIEVCKE 399
A+ +DL T I L + D A + +LG++ K
Sbjct: 302 EAMNDDLQTPLVISYLFEACHLINTLLDHKAEICADCLKELGDAMKLFAFDLLGLKNEKG 361
Query: 400 HLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
N A ++ ++ R K ++++D IR L + GF ++D K+ +
Sbjct: 362 DNNVAREEAYGKVVDMVLDLRAKAKADKDWTTSDKIRDALAAAGFEVKDTKDGVTWK 418
>gi|145295647|ref|YP_001138468.1| cysteinyl-tRNA synthetase [Corynebacterium glutamicum R]
gi|310947181|sp|A4QEA0|MSHC_CORGB RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|140845567|dbj|BAF54566.1| hypothetical protein [Corynebacterium glutamicum R]
Length = 420
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 119/416 (28%), Positives = 194/416 (46%), Gaps = 38/416 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSN---IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++T ++++ + + + MYVCG T YD H+G+A + FD++YR+L
Sbjct: 19 LELFDTADQEVRLVETPPAGSDTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRIL--LD 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 77 NDHDVHYVQNITDVDDPLFERAARDGVD------WRDLGTSQINLFRSDMEALSIIPPKD 130
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A I ++I +++ ++ G AY + D + N + +
Sbjct: 131 YIGAIESIDEVIEMVKTLLDEGAAYIVEDAEYPDVYASINATDKFGYESNYDAATMAEFF 190
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
KKNP D +LW+ + EP WESP+G GRPGWHIECSA++++ LG FDI
Sbjct: 191 AERGGDPDRPGKKNPMDALLWRAAREGEPSWESPFGAGRPGWHIECSAIATNRLGHSFDI 250
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + A +E+ A ++H G ++ +G KMSKS GN ++ L
Sbjct: 251 QGGGSDLIFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVSRLTA 310
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------II 347
IRL + HYR D+ + L AE L+ W + + + +
Sbjct: 311 A------GHEPGAIRLGVFANHYRGNRDWNAESLATAEQRLATWREAARAATNREDAIAV 364
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
+ + L DL+T A+ A+ A + A +LG+++
Sbjct: 365 VEQLRAHLSADLDTPGALAAVDNWAAGIDTTAGSKEFTEVGNIVVAAIDALLGVQL 420
>gi|255325703|ref|ZP_05366800.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium tuberculostearicum SK141]
gi|255297313|gb|EET76633.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium tuberculostearicum SK141]
Length = 415
Score = 221 bits (562), Expect = 3e-55, Method: Composition-based stats.
Identities = 120/410 (29%), Positives = 203/410 (49%), Gaps = 32/410 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++Y++ + I + + MYVCG T YD H+G+A + FD++YR
Sbjct: 21 QLRLYDSANQTIAPVE-VAGDTATMYVCGITPYDSTHLGHAATYLTFDLIYRAFLDAG-- 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
K V YV+NITD+DD + ERA ++ + + F D L+ P
Sbjct: 78 KKVHYVQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRSDMELLSVFPPQDYI 131
Query: 124 RATNHIPQMIYLIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
A + +++ ++Q ++ G AY + +I + +G S +E +
Sbjct: 132 GAMEAVDEIVEMVQKLLDAGAAYVVDDPEHPDIYASIEATERFGYESNYSAEEMRTFFAE 191
Query: 180 ----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
P++ KKNP D ++W+ EP W+SP+G GRPGWHIECSA++++ LG FDI G
Sbjct: 192 RGGDPDRPGKKNPLDALIWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGSTFDIQG 251
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE A + A +E+ A ++H G + L+G KMSKS GN + +++L+
Sbjct: 252 GGSDLKFPHHEFSAAHAEAALNVERMAQFYVHTGMIGLDGVKMSKSLGNLVFVHKLV--- 308
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT------STSKGIIDP 349
G IRL + HYR+ D++ + L A+ L+ W + +
Sbjct: 309 ---GAGEDPSAIRLGVFAGHYRDERDWSDEVLDAAKRRLAAWREALAQPGSMAGAEGVVA 365
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHD--LLPIFNASAH-ILGIEV 396
+ +A+ NDL+T +A+ A+ + A + + + + +LG++
Sbjct: 366 KLRAAIANDLDTPAALAAVDEWAEADRGTDEDGAADLVRTALNSLLGVQA 415
>gi|159111673|ref|XP_001706067.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
gi|11528339|gb|AAG37230.1| cysteinyl-tRNA synthetase [Giardia intestinalis]
gi|157434160|gb|EDO78393.1| Cysteinyl-tRNA synthetase [Giardia lamblia ATCC 50803]
Length = 645
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 122/427 (28%), Positives = 193/427 (45%), Gaps = 53/427 (12%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+ N+L ++ E + PS + Y+CGPTVYD H+G+AR + FDV+ R+L Y V
Sbjct: 10 LTNSLTGRLEELRTHAPSTVLAYICGPTVYDSTHLGHARTYVTFDVVRRILED-YFGLRV 68
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y NITD+DDKII RA + S I I K Q+F+ D L+ T R T
Sbjct: 69 RYQCNITDVDDKIIARAVERGSS------IFDICRKYEQEFLSDMHTLSVRPFTVVTRVT 122
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-----------KIDEQKM 175
++ +I IQ I+ +G AY + + FD ++ + G + ++ Q
Sbjct: 123 EYMADIILFIQKIMDNGFAYVSAGSVYFDVAAARSAGYSYPKLRPLGSSSDELQLLIQNA 182
Query: 176 GTRVPEK--YHKKNPADFILWKRSTPMEP---GWESPWGR------------GRPGWHIE 218
+ K++ +DF LWK EP W++ + GRPGWHIE
Sbjct: 183 DGMDSKNRVSEKRSASDFALWKAWKETEPEDAKWDATFSHKNGAVSELITLPGRPGWHIE 242
Query: 219 CSAMSS----HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
CSAM++ G FD+H GG DL FPHH+NE+ Q + ++H+G L +
Sbjct: 243 CSAMAAAVLGKDTGGAFDLHLGGCDLQFPHHDNELIQLETWAGKKNMIGCFLHSGHLKIA 302
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G MSKS NF T+ E+L + A +R+ M Y +D+++ + A
Sbjct: 303 GDVMSKSKKNFKTVREILSI-------FTANQVRMLFCMVPYSASLDYSISMMDAAVAKD 355
Query: 335 SKW-------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
K Q + + + + Y+ Q + L+ T + + I +A
Sbjct: 356 KKITSFLSNCRQIIQHEEELSEPIKNLRYSTTEEALEAQTIEFLSNVDTAFRNDINIVSA 415
Query: 388 SAHILGI 394
+H++ +
Sbjct: 416 MSHVMLL 422
>gi|300121951|emb|CBK22525.2| Cysteinyl-tRNA synthetase [Blastocystis hominis]
Length = 593
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 136/501 (27%), Positives = 216/501 (43%), Gaps = 67/501 (13%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++ +++ ++ Q + Y CGPTVYD +H+G+AR + D+L R+L +G
Sbjct: 21 RLVDSVSGELKVIQ-QKGKTLSWYSCGPTVYDSSHVGHARTYVQIDLLQRILSRRFG-MN 78
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+ IT+IDDKII ++RQ I S+ ++F+ D RL P R
Sbjct: 79 IHSAMGITNIDDKIINKSRQ------TMIPWQEIASRYEEEFINDMQRLNVKMPMSVVRV 132
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
++ IP+++ I+ + G AY+ ++ I FDT S I + + +R+ + K
Sbjct: 133 SDMIPEIVDYIRVLEDKGIAYKTSSGIYFDTQSSLYKYEKLVPSISDVESQSRLAQDPEK 192
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++P DF LWKR+ ++ W+SPWGRGRPGWHIECS G D+H GG+DL FPHH
Sbjct: 193 RHPRDFALWKRADDIDYSWDSPWGRGRPGWHIECSVNCHSLFGDHLDVHAGGIDLRFPHH 252
Query: 246 ENEIAQSCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
NEIAQ ++ +H G + +EGRKMSKS NFITI++LL +++
Sbjct: 253 CNEIAQCEAYSGGGGGAWCDMMLHIGHIFIEGRKMSKSLKNFITIDQLL-------QTYS 305
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-------------------------P 338
A R+ ++ HY I L EA+
Sbjct: 306 ANDFRMFCMLNHYSARIQLDDNGLVEAQRQWKALEASIHRVQTELSKGSRFGDSDSRVVR 365
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQA----LHKLARESTKNHDLLP------IFNAS 388
+ + +L ND NT + LH++ + +N L I N
Sbjct: 366 RWLEKWNETKTKIDESLANDSNTRQVVSETQNLLHEIEKCLLENRQALAGRVASLIANEM 425
Query: 389 AHI---LGIEVCKEHLNKNISIAIEKLVQERLILLKM--KK---------FSSADYIRKQ 434
+ LG + I+ L + R + + K + D +R+
Sbjct: 426 IDLYTDLGFVFDAKPTEMRDKEMIDALCEFRSAVRTICLKDTHSEVSREVLQACDALRQS 485
Query: 435 LESK-GFILEDYKNPDNGQRM 454
+ G + D K+
Sbjct: 486 ASDRFGITIIDGKSDVRWVVG 506
>gi|302518136|ref|ZP_07270478.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. SPB78]
gi|318059123|ref|ZP_07977846.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actG]
gi|318078551|ref|ZP_07985883.1| cysteinyl-tRNA synthetase [Streptomyces sp. SA3_actF]
gi|302427031|gb|EFK98846.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. SPB78]
Length = 409
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 122/381 (32%), Positives = 188/381 (49%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + R+YVCG T YD H+G+A FD++ R+
Sbjct: 17 RDLRIHDTATDGPVTLTP---GEVARIYVCGITPYDATHMGHAATYNAFDLVQRVWLDSG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 74 --RQVHYVQNVTDVDDPLLERAVRDG------EDWTGLAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F +S ++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLCAMGAAYELEGDIYFSVASDRHFGEVSNLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L +
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEHPFARSYVHAGMVGLDGEKMSKSKGNLVFVSRLRKD-- 303
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T + L EA L++W S + V
Sbjct: 304 ----GVDPAAIRLALLAHHYRADWEWTAEGLQEAVDRLARWRAAVSRPDGPSAEALVEEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ A+ A + A
Sbjct: 360 RDALADDLDSPRALLAFDRWA 380
>gi|324997324|ref|ZP_08118436.1| cysteinyl-tRNA synthetase [Pseudonocardia sp. P1]
Length = 412
Score = 220 bits (561), Expect = 3e-55, Method: Composition-based stats.
Identities = 125/413 (30%), Positives = 208/413 (50%), Gaps = 36/413 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++T ++ P + MYVCG T YD H+G+A + FD++ RL R
Sbjct: 17 PPLRLHDTATGRVR---PTAPGPVATMYVCGITPYDATHLGHAATYLAFDLVNRLWRDLG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV+N+TDID+ ++ERA ++ D ++ + T F +D L L P
Sbjct: 74 HE--VHYVQNVTDIDEPLLERAERDQ------DDWVVLGLRETALFREDMEALRVLPPRQ 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
A IP++ L++ ++ G AY ++ ++ D S+ +G S ++ +
Sbjct: 126 FVGAVEAIPEIAELVEKLVASGAAYRLDDPEYPDVYHDVSATGRFGYESNYDLETMLQFS 185
Query: 178 RV----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
R P++ K+NP D +LW+ + P EP WES GRGRPGWH+EC+A+ + LG+ D+
Sbjct: 186 RERGGDPDRPGKRNPLDPLLWRMARPGEPAWESGLGRGRPGWHVECAAIGLNRLGQQIDL 245
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
+GGG DLIFPHHE + A ++H G + L+G KMSKS GN + +++L
Sbjct: 246 NGGGSDLIFPHHECGALHAESLTGEHPFARHYVHTGMIGLDGEKMSKSKGNLVFVSKLRS 305
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL- 352
+ V+R+A+L HYR+ +T + + E +++W + D A L
Sbjct: 306 S------GVDPNVVRVALLDGHYRDDRSWTDEVHAKGEGRVARWREAVELDAGPDAAELV 359
Query: 353 ----SALYNDLNTVSAIQALHKLARES--TKNHDLLP---IFNASAHILGIEV 396
+ L +DL+T A+ A+ A E+ + D A +LG+ +
Sbjct: 360 AKLRTHLADDLDTPGALAAVDAWADEALTRRGTDAGAPQLARTALDALLGVRL 412
>gi|307330786|ref|ZP_07609922.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces violaceusniger Tu 4113]
gi|306883589|gb|EFN14639.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces violaceusniger Tu 4113]
Length = 409
Score = 220 bits (561), Expect = 4e-55, Method: Composition-based stats.
Identities = 131/408 (32%), Positives = 199/408 (48%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + I++T + P + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLSIHDTATGGR---ITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA++ D + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAQRNG------DDWTALAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F S P++GS SR + +
Sbjct: 126 YIGAVESIPGIVPLVERLRDLGAAYELEGDIYFSVESDPSFGSVSRLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ G GRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGSGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAKTYVHAGMVALDGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T L EAE L +W S + +
Sbjct: 301 -RRDGVDPAAIRLALLAHHYRSDWEWTDGVLREAEERLGRWRAAVSRPDGPSAAALVEEI 359
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
AL NDL++ +A+ A+ + A T + A +LG+
Sbjct: 360 REALANDLDSPAALAAVDRWAAAQTATGGTDEGAPGLVSRAVDALLGV 407
>gi|332841659|ref|XP_509736.3| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial [Pan
troglodytes]
Length = 591
Score = 219 bits (559), Expect = 5e-55, Method: Composition-based stats.
Identities = 123/548 (22%), Positives = 200/548 (36%), Gaps = 117/548 (21%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YN+L + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 53 QVYNSLTGRKEPLIVAHAEAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTKVFGCNI 112
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V V ITD+DDKII+RA + +N + + + S + F +D L L PT R
Sbjct: 113 V-MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRV 165
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSF----SRRKIDEQKMGTRVP 180
T +IPQ+I I+ II G+AY + FD S + + E +
Sbjct: 166 TENIPQIISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGPVGEPGFSAHLK 225
Query: 181 EKYHKKNPADFILWKRSTPME-------------------PGWESPWGRGRPGWHIEC-S 220
Y + ++ E G+ PG +
Sbjct: 226 ASYTYIIFSRSSVFCCYRVSEKRRLLRRDTAWGMLPTGGWRGFHQGGRLDFPGGGDQLSF 285
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKM 278
G DIH GG+DL FPHHENEIAQ + E+ N ++H+G L+ + KM
Sbjct: 286 CGGGMLFGNQLDIHSGGIDLAFPHHENEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKM 345
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT---------- 328
SKS N+ITI + L +++ V R L + YR ID++ +
Sbjct: 346 SKSLKNYITIKDFL-------KTFSPDVFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLG 398
Query: 329 ------------EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
+ + AV +AL +D +T + A+ L
Sbjct: 399 SFLEDARAYMKGQLACGSVREAMLWERLSSTKRAVKAALADDFDTPRVVDAILGLTHHGN 458
Query: 377 KN-----------------HDLLPIFNASAHILGIEVCKEHLNKNISIA------IEKLV 413
++ F +GI + + +++LV
Sbjct: 459 GQLRASLKEPGGPRSPAVFGAIISYFEQFFETVGISLANQQYVSGDGSEATLHGVVDELV 518
Query: 414 QERLILLKMKKFSSA-----------------------DYIRKQLESKGFILEDYKNPDN 450
+ R + + F+ A D +R+ L + G ++D + +
Sbjct: 519 RFRQKVRQ---FALAMPEATGDAQRQQLLERQPLLEACDTLRRGLTAHGINIKDRSSTTS 575
Query: 451 GQRMTRWK 458
W+
Sbjct: 576 -----TWE 578
>gi|117928379|ref|YP_872930.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|310947169|sp|A0LU34|MSHC_ACIC1 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|117648842|gb|ABK52944.1| cysteinyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 403
Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats.
Identities = 123/398 (30%), Positives = 197/398 (49%), Gaps = 27/398 (6%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
+++T R++ + MYVCG T YD H+G+A + FD+L R ++ V
Sbjct: 21 LFDTASRRLVTVGSQQG--ASMYVCGITPYDATHLGHAATYVAFDLLVR--TWHDAGVTV 76
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y +N+TD+DD ++ERARQ ++ I ++ T +F D L + P
Sbjct: 77 RYAQNVTDVDDPLLERARQ------VDQPWEAIAARETAKFRADMAALRVVPPDRYVGVV 130
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY--- 183
+PQ+I LI+ + G YE + + F T +IP++G+ S D+
Sbjct: 131 ESLPQIIGLIEVLRSRGLTYELDGDQYFATHAIPDFGAVSHLGRDDMIALFAARGGDPDR 190
Query: 184 -HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+P D +LW+ P EP W +P+GRGRPGWH+EC+A++ +L D+ GGG DL+F
Sbjct: 191 AGKKDPLDALLWRGKRPEEPSWPAPFGRGRPGWHVECAAIALTHLPLPLDVQGGGADLVF 250
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHH+ AQ+ A + A ++H G + +G KMSKS GN + +++L
Sbjct: 251 PHHDMTAAQAEAATGR-RFARAYVHTGLVAYQGEKMSKSLGNLVFVSDLCAA------GA 303
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSALYN 357
+RLA+L HYR ++T + L EA L++W + AV L +
Sbjct: 304 DPMAVRLALLDHHYRTEWEWTPRLLDEATDRLAEWRAAVRRPRGAPGDGLLAAVRDRLAD 363
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAH-ILGI 394
DL+ AI + + + + D + A A +LG+
Sbjct: 364 DLDAPGAIALIDEWTTQDGDDPDAPTLVAAMADALLGV 401
>gi|227504344|ref|ZP_03934393.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
gi|227198992|gb|EEI79040.1| cysteinyl-tRNA synthetase [Corynebacterium striatum ATCC 6940]
Length = 412
Score = 219 bits (559), Expect = 6e-55, Method: Composition-based stats.
Identities = 123/410 (30%), Positives = 194/410 (47%), Gaps = 38/410 (9%)
Query: 5 IKIYNTLE---RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +Y++ + RK+ + MYVCG T YD H+G+A + FD+ YR L
Sbjct: 19 LHLYDSADETIRKVE----VSGETATMYVCGITPYDSTHLGHAATYLTFDLAYRQLLDNG 74
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + + F D L+ L P
Sbjct: 75 YQ--VHYVQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMELLSVLPPQD 126
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A I ++ ++ +I G AY ++ D + + + +
Sbjct: 127 YVGAMEVIDEVTEMVSKLIDAGAAYVVDDPEFPDVYASIDATKNFGYESNYTAAEMAEFF 186
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K+NP D ++W+ EP W+SP+G GRPGWHIECSA++++ LG FDI
Sbjct: 187 AERGGDPDRPGKRNPLDALVWRAHREGEPAWDSPFGPGRPGWHIECSAIATNRLGAPFDI 246
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL FPHHE A + A +E+ A +++H G + L+G KMSKS GN + +++L+E
Sbjct: 247 QGGGSDLKFPHHEFSAAHAEAALGVERMAQVYVHTGMIGLDGVKMSKSLGNLVFVHKLVE 306
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID----- 348
IRL + HYR D++ + L +A L W + G ++
Sbjct: 307 A------GVDPSAIRLGVFAGHYRAERDWSDEVLEQANERLGVWRDALQNPGSLEVAQEL 360
Query: 349 -PAVLSALYNDLNTVSAIQALHKLA---RESTKNHDLLPIFNASAHILGI 394
A+ AL NDL+T + + A+ A R + + I A +LG+
Sbjct: 361 VAAIRGALANDLDTPAVLAAVDAWASADRGANNDEAGELIRTALDSLLGV 410
>gi|25028195|ref|NP_738249.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
gi|259507253|ref|ZP_05750153.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium efficiens YS-314]
gi|61216662|sp|Q8FTD0|MSHC_COREF RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|23493479|dbj|BAC18449.1| cysteinyl-tRNA synthetase [Corynebacterium efficiens YS-314]
gi|259165196|gb|EEW49750.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium efficiens YS-314]
Length = 430
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 111/354 (31%), Positives = 172/354 (48%), Gaps = 25/354 (7%)
Query: 5 IKIYNTLERKITEFQ--AIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +Y+T ++++ + + MYVCG T YD H+G+A + FD++YR+L
Sbjct: 19 LALYDTADQQVKPVEVPPSGSGTPVGMYVCGITPYDSTHLGHAATYLAFDLIYRVL--LD 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V YV+NITD+DD + ERA ++ + + F KD LA + P
Sbjct: 77 NDHQVHYVQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRKDMETLAVIPPKD 130
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A I ++I ++ ++ G AY ++ D + N + +
Sbjct: 131 YIGAIESIDEVIEMVSTLLEEGAAYVVDDPEYPDVYASINATENFGYESNYDAATMAELF 190
Query: 182 KYH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
K+NP D +LW+ + EP WESP+G GRPGWHIECSA++++ LG FDI
Sbjct: 191 AERGGDPDRPGKRNPMDALLWRAAREGEPSWESPFGPGRPGWHIECSAIATNRLGHSFDI 250
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL+FPHHE A + A +E+ A ++H G ++ +G KMSKS GN ++ L
Sbjct: 251 QGGGSDLMFPHHEFSAAHAEAAHGVERMAKHYVHAGMISQDGVKMSKSLGNLEFVHRLTA 310
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
IRL + HYR D++ + L AE L+ W T +
Sbjct: 311 A------GHEPGAIRLGVYAHHYRGDRDWSDEILAAAEARLALWRSAITVATDV 358
>gi|68535433|ref|YP_250138.1| cysteinyl-tRNA synthetase [Corynebacterium jeikeium K411]
gi|260578233|ref|ZP_05846150.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium jeikeium ATCC 43734]
gi|311740644|ref|ZP_07714471.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
33035]
gi|123761918|sp|Q4JXD7|MSHC1_CORJK RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase 1;
Short=L-Cys:GlcN-Ins ligase 1; AltName: Full=Mycothiol
ligase 1; Short=MSH ligase 1
gi|68263032|emb|CAI36520.1| cysS2 [Corynebacterium jeikeium K411]
gi|258603633|gb|EEW16893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium jeikeium ATCC 43734]
gi|311304164|gb|EFQ80240.1| cysteinyl-tRNA synthetase [Corynebacterium pseudogenitalium ATCC
33035]
Length = 404
Score = 219 bits (557), Expect = 1e-54, Method: Composition-based stats.
Identities = 123/403 (30%), Positives = 197/403 (48%), Gaps = 32/403 (7%)
Query: 5 IKIYNTLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+++T ++++ E + MYVCG T YD H+G+A + FD+ R L
Sbjct: 19 LKLFDTADQRVKEVDTTPDANGEVGMYVCGITPYDSTHLGHAATYLTFDLAQRQLLANG- 77
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V Y +NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 78 -HKVHYAQNITDVDDPLFERAERDGVD------WRELGTSQINLFRSDMEILSVIPPRDY 130
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A + ++I ++Q ++ G AYE +I + +G S +
Sbjct: 131 IGAMESVDEVIAMVQQLLDAGAAYELDQGDIYASIDATEQFGYESNLDRATMEEYFAERG 190
Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ K++P D ++W+ EP W+SP+G GRPGWH+ECSA++++ LG F I GGG
Sbjct: 191 GDPDREGKRDPLDALIWRGHREGEPAWDSPFGPGRPGWHVECSAIATNRLGSHFAIQGGG 250
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE A + A ++E+ A ++H G + L+G KMSKS GN + +++L E
Sbjct: 251 SDLAFPHHEFSAAHAEAALKVERMAGHYVHAGMIALDGVKMSKSLGNLVFVHKLSEA--- 307
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ------TSTSKGIIDPAV 351
IRLA+ HYRE DF+ L EAE L++W + + + +
Sbjct: 308 ---GHDPSAIRLAVFAGHYREDRDFSDAILAEAEERLTRWREQLAGEVSEAEATEVVDKL 364
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ L +DLNT A+ L A + + I A +LG+
Sbjct: 365 RAILADDLNTPEALSLLDGAAGDCNQI-----IATALDGLLGV 402
>gi|329939109|ref|ZP_08288483.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329301994|gb|EGG45887.1| cysteinyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 409
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 119/380 (31%), Positives = 186/380 (48%), Gaps = 26/380 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++I++T Q R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGAPVTLQP--GPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLDT 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
++ V YV+N+TD+DD ++ERA ++ + + + T+ F +D T L L P H
Sbjct: 73 KRQVHYVQNVTDVDDPLLERAERDGLD------WTALAEQETKLFREDMTALRMLPPRHY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTR 178
A IP ++ L++ + G AY+ ++ F S P++G S +
Sbjct: 127 IGAVEAIPGIVPLVERLRELGAAYDLEGDVYFSVESDPHFGEVSHLDAAAMRLLSAERGG 186
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GGG
Sbjct: 187 DPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGGG 246
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE + + A ++H G + L+G KMSKS GN + + +
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFV------SRL 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVL 352
IRLA+ HYR ++T Q L +A L +W + + AV
Sbjct: 301 RRDGVDPAAIRLALHAHHYRSDWEWTDQVLRDAVARLERWRAAVSRPDGPAAEDMVEAVR 360
Query: 353 SALYNDLNTVSAIQALHKLA 372
+AL +DLN A+ A+ +
Sbjct: 361 AALADDLNAPEALAAVDRWV 380
>gi|41407974|ref|NP_960810.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|61216571|sp|Q73YS9|MSHC_MYCPA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|41396328|gb|AAS04193.1| CysS2 [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 415
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 124/411 (30%), Positives = 197/411 (47%), Gaps = 33/411 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI--RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++++Y+T +R++ A MYVCG T YD H+G+A + FD++YR ++
Sbjct: 17 PELRLYDTSDRQVRPVAAGAGPGSAATMYVCGITPYDATHLGHAATYLAFDLIYR--QWL 74
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V YV+N+TD+DD ++ERA ++ + + F +D L LAP
Sbjct: 75 DLGHDVHYVQNVTDVDDPLLERAARDGVD------WRALAEREVSLFREDMAALRILAPR 128
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANN---EIIFDTSSIPNYGSFSRRK----IDEQ 173
AT I ++ L++ ++ G AY + +I + + +G S +
Sbjct: 129 DYVGATEAIADVVELVEKMLASGAAYVVDGEFPDIYYRADATLQFGYESGYDRETMLRLF 188
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
P++ K + D +LW+ + P EP W SP+G GRPGWH+EC+A++ +G DI
Sbjct: 189 AERGGDPQRPGKTDALDALLWRAARPGEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDI 248
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DLIFPHHE A + C + A ++H G + +G KMSKS GN + +++L
Sbjct: 249 QGGGSDLIFPHHEFTAAHAECVRGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL-- 306
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIID 348
GR IRL +L HYR ++ Q L EA L +W + +
Sbjct: 307 ----RGRGVEPAAIRLGLLAGHYRGDRYWSDQVLDEATARLRRWRTATALPAGPDATDVI 362
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLP---IFNASAHILGI 394
V L +DLNT A+ AL ++ HD + +A +LG+
Sbjct: 363 ARVRQYLADDLNTPKALAALDGWTTDALDYGGHDTAAPRLVASAVDALLGV 413
>gi|123477243|ref|XP_001321790.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
gi|121904623|gb|EAY09567.1| cysteinyl-tRNA synthetase family protein [Trichomonas vaginalis G3]
Length = 660
Score = 218 bits (556), Expect = 1e-54, Method: Composition-based stats.
Identities = 152/540 (28%), Positives = 215/540 (39%), Gaps = 106/540 (19%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
IKIYN+L I + +R Y CGPTVY +H+G+AR + FD++ R+L Y
Sbjct: 11 IKIYNSLGANIVPLKREKGLPLRCYTCGPTVYSTSHLGHARTYLSFDMIRRILTD-YFNI 69
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISI---ITSKNTQQFVKDTTRLACLAPTH 121
V + N+TDIDDKII S ++ + F + L P
Sbjct: 70 PVQWSMNVTDIDDKIINTFN--GMSDDKKAKYGTALGYSADREKAFFAELDTLNIRRPDA 127
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ------KM 175
R + IP++I I N+ AYE+ + FD + G F +++ Q K
Sbjct: 128 LLRVSEVIPEIIEFISNLEEKSFAYESEGSVYFDVEKFEHDGRFVYAELERQSYLGTAKS 187
Query: 176 GTRVPEKYHKKNPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
+ K+N DF LWK++ P E WE+ WGRGRPGWHIECS MS + G F
Sbjct: 188 ENPEDMQEKKRNRNDFALWKKAKPEEEAAGQYWETKWGRGRPGWHIECSTMSGLFYGPQF 247
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN-LEGRKMSKSNGNFITINE 290
D+H GG+DL FPHH NEIAQS W+H G L G KMSKS GNF ++ +
Sbjct: 248 DLHAGGIDLRFPHHSNEIAQSQARWEKVPWVRNWMHTGTLRAANGEKMSKSLGNFFSVQD 307
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW------------- 337
L + W V+R+ +HYR P+D + +++A++ LSK
Sbjct: 308 GL-------QHWSPAVLRMIFCQSHYRNPMDLSEDNISQAQVKLSKITNFLSSIEPLTLK 360
Query: 338 -------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD---- 380
S + +D + A+ AL L E KN D
Sbjct: 361 SISELKRGFKPEDKAFSYFIAKTAEDIERYFADDFDIPKAVNALVALIDEYNKNKDVVID 420
Query: 381 -----LLPIFNASAHILGIEV---CKEHLNKNISIA-----------------IEKLVQE 415
+ +LG N N++ + I L Q
Sbjct: 421 SLVVEAAKLVRRIMVVLGFSPETVLLSQSNTNLNESGFPQAMAAYRQNVRTNNINMLKQV 480
Query: 416 RLILLK-----MKKFSSA---------------------DYIRKQ-LESKGFILEDYKNP 448
R + K+ + A D +R + L S G LED N
Sbjct: 481 RELAKSLNIDMKKQPAEANPVYDLLKQLETGVKENMTQLDTLRDESLPSIGIKLEDNANG 540
>gi|297198535|ref|ZP_06915932.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sviceus ATCC 29083]
gi|197716199|gb|EDY60233.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sviceus ATCC 29083]
Length = 409
Score = 218 bits (555), Expect = 1e-54, Method: Composition-based stats.
Identities = 131/408 (32%), Positives = 202/408 (49%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T ++DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGG---LVSLDPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TDIDD ++ERA ++ + + K T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDIDDPLLERAERDSID------WAALAEKETVLFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE + F S PN+G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDTYFSVESDPNFGKVSNLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ + GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMTFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + +++L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFVSQL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYR ++T Q L +A L +W S + +
Sbjct: 301 -RREGVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAAVSRPDGPSAEELVEEI 359
Query: 352 LSALYNDLNTVSAIQALHKLA--RESTKNHDLLP---IFNASAHILGI 394
AL NDL+ +A+ A+ + A +E D+ + A +LG+
Sbjct: 360 REALANDLDAPTALTAVDRWAALQEEQGGTDMGAPGVVTRAVDALLGV 407
>gi|328881306|emb|CCA54545.1| L-cysteine:1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase MshC [Streptomyces venezuelae ATCC 10712]
Length = 409
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 125/407 (30%), Positives = 197/407 (48%), Gaps = 31/407 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++I++T R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGRVTLAP--GPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLDT 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
++ V YV+N+TD+DD ++ERA ++ + + T F +D T L L P H
Sbjct: 73 KRQVHYVQNVTDVDDPLLERAIRDGVD------WVGLAERETALFREDMTALRMLPPQHY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTR 178
A IP ++ L++ + G AYE + +I F + P++G S + +
Sbjct: 127 IGAVEAIPGIVPLVERLRDSGAAYELDGDIYFSVDADPHFGEVSHYSTELMRHLSAERGG 186
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
PE+ KKNP D +LW + EP W+ + G GRPGWHIEC A++ +LG FD+ GGG
Sbjct: 187 DPERPGKKNPLDPMLWMAAREGEPSWDGASLGAGRPGWHIECVAIALDHLGMGFDVQGGG 246
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHE + + A ++H G + L+G KMSKS GN + + K
Sbjct: 247 SDLIFPHHEMGASHAQALTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFV------SKL 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVL 352
IRLA+L YR+ ++T Q L +A+ L +W S + +
Sbjct: 301 RRDGVDPAAIRLALLSHRYRDDWEWTDQVLRDAQERLGRWRAAVSRPDGPSADALVEELR 360
Query: 353 SALYNDLNTVSAIQALHKLAR----ESTKNHDLLPIF-NASAHILGI 394
AL +DL+T +A+ A+ + A E + + A +LG+
Sbjct: 361 EALSDDLDTPTALVAVDRWAELQAAEGGTDDSAPGLVSRAVDALLGV 407
>gi|29833189|ref|NP_827823.1| cysteinyl-tRNA synthetase [Streptomyces avermitilis MA-4680]
gi|61216619|sp|Q828M2|MSHC_STRAW RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|29610311|dbj|BAC74358.1| putative ATP-dependent l-cysteine: 1D-myo-inositoyl
2-amino-2-deoxy-alpha-D-glucopyranoside ligase
[Streptomyces avermitilis MA-4680]
Length = 409
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 113/344 (32%), Positives = 171/344 (49%), Gaps = 23/344 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + + P + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGV---IPLHPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + K T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAERDGVD------WVGLAEKETALFREDMTALRMLPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE + ++ F + P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVEADPHFGKVSNLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ + GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGASLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L G KMSKS GN + + K
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALNGEKMSKSKGNLVFV------SK 299
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T L EA L W
Sbjct: 300 LRRDGVDPAAIRLALLAHHYRSDWEWTDAVLEEALARLGTWRAA 343
>gi|326382269|ref|ZP_08203961.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326198999|gb|EGD56181.1| cysteinyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 416
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 114/353 (32%), Positives = 177/353 (50%), Gaps = 26/353 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y+T + ++ + + P + MYVCG T YD H+G+A + FD++ R+LR +
Sbjct: 19 LRLYDTSDAQV---KPVSPGEVATMYVCGITPYDATHLGHAATYVTFDLINRVLRDGGHD 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+NITD+DD + ERA ++ + ++ F D T L LAP
Sbjct: 76 --VHYVQNITDVDDPLFERAERDGVD------WRDLGAREIDLFRADMTALRVLAPRDYI 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
A I ++I + ++ +G AY ++ ++ F + P +G S +
Sbjct: 128 GAVESIDEVIDAVGKLLANGSAYVVDDPEFPDVYFSVDATPQFGYESGYDGETMAKFFAE 187
Query: 180 PEKY----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K+NP D ++W+ + EP WESP G GRPGWHIECSA++ + LG FDI G
Sbjct: 188 RGGDPDRAGKRNPLDALVWRAARDGEPSWESPMGPGRPGWHIECSAIALNRLGMAFDIQG 247
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + A ++H G + L+G KMSKS GN + +++L
Sbjct: 248 GGSDLIFPHHEFSAAHGEALTGERRFARHYVHTGMIGLDGEKMSKSLGNLVLVSKLRAA- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
A +RL ++ HYR +T LT+ E L+ W + + D
Sbjct: 307 -----GVDAGAVRLGLMSQHYRADRMWTDDILTDGERRLATWRRAAKHATGPD 354
>gi|310947220|sp|D7BSS4|MSHC_STRBB RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|297161859|gb|ADI11571.1| cysteinyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 409
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 131/408 (32%), Positives = 199/408 (48%), Gaps = 33/408 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGG--PLT-LDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TDIDD ++ERA D + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDIDDPLLERAVANG------DDWTALAERETTLFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F S P++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDIYFSVESDPSFGGVSGLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + P EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPDRPGKKNPLDPMLWLAARPGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAKAYVHAGMVALDGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAV 351
IRLA+L HYRE ++T L EA+ L++W + +
Sbjct: 301 -RRDGVDPAAIRLALLAHHYREDWEWTDGVLQEAQERLARWRAAVSRPDGPPADALLDEI 359
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGI 394
+AL NDL+ SA+ A+ + A + A +LG+
Sbjct: 360 RTALANDLDAPSALAAVDRWASAQASEGGTDEGAPGLVSRAVDALLGV 407
>gi|240047303|ref|YP_002960691.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
gi|239984875|emb|CAT04868.1| Cysteinyl-tRNA synthetase [Mycoplasma conjunctivae]
Length = 401
Score = 218 bits (554), Expect = 2e-54, Method: Composition-based stats.
Identities = 132/416 (31%), Positives = 190/416 (45%), Gaps = 25/416 (6%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
I+ + ++YVCGPTVYDF HIGN RP+I FD L +LR Y K V ++ NITDIDDKII
Sbjct: 3 INKDSFKIYVCGPTVYDFIHIGNLRPIISFDFLISILR--YFNKKVDFLHNITDIDDKII 60
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
RA E N + S I + +++ P + T+H+ ++I I N+
Sbjct: 61 NRALAE------NKSESEIANFYYLHYLEMLKIYNVFPPNMIIKVTDHLDKIINYISNLE 114
Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
G Y + ++IF+T I NYG S + + + N DF+LWK++
Sbjct: 115 QAGFTYYNQDGDLIFNTKKIENYGKVSGQILSKLYKNKDNKA-----NNNDFVLWKKTKK 169
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
+ S +G GRPGWH ECSAM Y DIHGGG DLIFPHHENE AQ ++ E
Sbjct: 170 G-VVYNSSFGLGRPGWHTECSAMIFDYFNTQIDIHGGGNDLIFPHHENENAQHFALNK-E 227
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
W+ G +N+ G+KMSKS GN I + + + V R +L + P
Sbjct: 228 DITKDWLRVGVININGQKMSKSLGNVILAKDF-------YQKYHPDVFRNILLTSSLSSP 280
Query: 320 IDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
I+ T + LT L+ + ++ + +P + D + A
Sbjct: 281 INITSELLTNHSNLILSYKKS-YFNHLFNPQTVDKNKVDEVLNLFLSQNFSQANLIISQL 339
Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ A I + K I + K +S AD IR++L
Sbjct: 340 LKTNQNSTLALIFQTLRFQFASLKASDEDI-AMYNLWNQKRVAKLWSEADEIREKL 394
>gi|302550316|ref|ZP_07302658.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces viridochromogenes DSM 40736]
gi|302467934|gb|EFL31027.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces viridochromogenes DSM 40736]
Length = 409
Score = 217 bits (553), Expect = 3e-54, Method: Composition-based stats.
Identities = 114/344 (33%), Positives = 173/344 (50%), Gaps = 23/344 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGG---LVTLDPGPVARIYVCGITPYDATHLGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA+++ + + + T F +D T L L P
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAQRDGLD------WAALAEQETALFREDMTALRMLPPRQ 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE ++ F S P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDLGAAYELEGDVYFSVESDPHFGKVSNLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + + K
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFV------SK 299
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T Q L +A L +W
Sbjct: 300 LRYDGVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAA 343
>gi|12045107|ref|NP_072918.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
gi|1351147|sp|P47495|SYC_MYCGE RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|3844851|gb|AAC71473.1| cysteinyl-tRNA synthetase [Mycoplasma genitalium G37]
gi|166078699|gb|ABY79317.1| cysteinyl-tRNA synthetase [synthetic Mycoplasma genitalium
JCVI-1.0]
Length = 428
Score = 217 bits (552), Expect = 3e-54, Method: Composition-based stats.
Identities = 140/444 (31%), Positives = 203/444 (45%), Gaps = 53/444 (11%)
Query: 19 QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
+ I +Y+CGPTVY+ H+GN RP+IVFDVL R+L+ + V +V+NITDIDDK
Sbjct: 11 TTLVQKTINIYLCGPTVYNDLHLGNTRPLIVFDVLNRVLKKA--KYTVNFVQNITDIDDK 68
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
II+ A+Q+ S + +T + + +L L H T I ++ I
Sbjct: 69 IIKIAQQQEVSESV------VTKQQITAYKSLLKKLNILPIKHIQ-ITEKIDKIPDYIDQ 121
Query: 139 IILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ HAY N + F +S+ YG + +M KKN DF+LWK
Sbjct: 122 LVNQNHAYVSTQNNVYFAVNSLKQYGYLAN------RMVHLEETDTDKKNKLDFVLWK-I 174
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
T W S WG GRPGWH+EC+ + + IHGGG+DL FPHHENE A
Sbjct: 175 TTAGIKWNSKWGLGRPGWHVECAFLIDYCFKNELTIHGGGVDLKFPHHENENALHMALYN 234
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ W+H G L +E +KMSKS NF+ + L F V+R HY
Sbjct: 235 -QPITKHWMHIGHLMIENQKMSKSLQNFLLAVDFLNFHDF-------RVLRWIFYQKHYL 286
Query: 318 EPIDFTVQRLTEAEILLSK----------WPQTSTSKGIIDPAVLSALY----NDLNTVS 363
PID + +A + + W S +I P ++ ++LN +
Sbjct: 287 HPIDLNQSLIEKANNDIQRIAKTLNVARTWLVYSEQSELISPKQYDPVFSALLDNLNFAN 346
Query: 364 AIQALHKLARESTKN---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
A+ A+ KL ++ + + L S +LGI H N+ +L++
Sbjct: 347 AVAAIWKLIKKINTSIKTKDFSVLREQLSFLEWSIDLLGISFKSIHTKLNV-----RLIK 401
Query: 415 ERLILLKMKKFSSADYIRKQLESK 438
E IL K K AD IRK+L K
Sbjct: 402 EWSILHKQKAMDKADQIRKKLIKK 425
>gi|297195348|ref|ZP_06912746.1| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
25486]
gi|297152754|gb|EDY63189.2| cysteinyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
25486]
Length = 366
Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 174/344 (50%), Gaps = 23/344 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTAT---DGLVTLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERATRDGHD------WTELAERETALFREDMTALRMLPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE ++ F S P++G SR + +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELEGDVYFSVESDPHFGEVSRLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L+G KMSKS GN + + K
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEHPFAKAYVHAGMVALDGAKMSKSKGNLVFV------SK 299
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T L EA + +W
Sbjct: 300 LRRDGVDPAAIRLALLSHHYRADWEWTDAVLREAVERVGRWRAA 343
>gi|295395900|ref|ZP_06806085.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
gi|294971173|gb|EFG47063.1| cysteine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
Length = 391
Score = 216 bits (551), Expect = 4e-54, Method: Composition-based stats.
Identities = 117/393 (29%), Positives = 176/393 (44%), Gaps = 31/393 (7%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
+ ++YVCG T YD H+G+A + FDVL+RL VTYV+NITD+DD ++
Sbjct: 14 VRGDEAKLYVCGITPYDATHLGHASTYVAFDVLHRLWIDAGY--SVTYVQNITDVDDPLL 71
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
ERA+ + + F D L + PTH A + + + ++
Sbjct: 72 ERAQATGVD------WQELAREQIDLFRSDMEALRVIPPTHYIGAVEAMDIVARSVVELL 125
Query: 141 LHGHAYE-ANNEIIF--DTSSIPNYGSFSRRKIDEQKMGTRVPEKY----HKKNPADFIL 193
G AY N ++ F D+S P +GS S D K+NP D +L
Sbjct: 126 DKGFAYSLDNGDVYFKIDSSYKPPFGSVSHYDADTMAKLFAERGGDPDVAGKENPLDPLL 185
Query: 194 WKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
W+ EP W GRPGWHIEC+A++ Y G + GGG DL FPHHE A +
Sbjct: 186 WRAKREGEPSWDPDGLPAGRPGWHIECTAIAQEYAGLPLHVQGGGNDLAFPHHEMGAAHA 245
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A A ++H G + EG KMSKS GN + +++L E + IRL +L
Sbjct: 246 -AAWLDTPLAQSYMHTGMVGYEGEKMSKSLGNLVLVSQLRE------QGVDPMAIRLTIL 298
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQT-----STSKGIIDPAVLSALYNDLNTVSAIQA 367
HYR + L +A L +W + + + L +DL+T +A+
Sbjct: 299 DHHYRSDWMYDDGALAKATERLEQWRRAAQCGSHYVSKDVVRELRECLADDLDTPTALSL 358
Query: 368 LHKL--ARESTKNH-DLLPIFNASAHILGIEVC 397
+ AR+ + + + A +LGI++
Sbjct: 359 IDDWAAARDQNTSESESEAVVKAVDALLGIQLA 391
>gi|213965593|ref|ZP_03393787.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium amycolatum SK46]
gi|213951752|gb|EEB63140.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium amycolatum SK46]
Length = 451
Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats.
Identities = 105/345 (30%), Positives = 173/345 (50%), Gaps = 24/345 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T ++K+++ + MYVCG T YD H+G+A + FD++YR L
Sbjct: 42 LRLYDTADQKVSQVE--AGPEATMYVCGITPYDATHLGHAATYLTFDLIYRQLLDNG--H 97
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 98 SVHYVQNITDVDDPLFERAERDGVD------WRELGTSQIDLFRSDMENLSVIPPRDYIG 151
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
A + +++ +++ ++ +G AY+ N+ D + + +
Sbjct: 152 AMESVDEVVDMVEKLLENGSAYQLTNDEYPDVYFRKSATENFGYESNYSAEQMAEFFAER 211
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K+NP D ++W+ + P EP WE+P+G GRPGWHIECSA++++ LGK FDI GG
Sbjct: 212 GGDPDRPGKENPLDALVWRAARPGEPSWEAPFGAGRPGWHIECSAIATNRLGKSFDIQGG 271
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE A + A + A ++H G + L+G KMSKS GN + +++L+
Sbjct: 272 GSDLAFPHHEFSAAHAEAATGCARMARHYVHAGMIALDGVKMSKSLGNLVFVSKLVAA-- 329
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
IR+ + +HYR D++ + L A+ L W
Sbjct: 330 ----GVDPSAIRIGVFASHYRSDRDWSDEVLEAAKARLEAWRAAC 370
>gi|302533542|ref|ZP_07285884.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. C]
gi|302442437|gb|EFL14253.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. C]
Length = 409
Score = 216 bits (551), Expect = 5e-54, Method: Composition-based stats.
Identities = 114/352 (32%), Positives = 177/352 (50%), Gaps = 23/352 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + + P + R+YVCG T YD HIG+A FD++ R+ +
Sbjct: 17 RDLQIHDTATQGT---ITLAPGPVARLYVCGITPYDATHIGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 72 NKRQVHYVQNVTDVDDPLLERALRDGHD------WTELAERETALFREDMTALRMLPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM----GT 177
A IP ++ L++ + G AYE + ++ F + P++G S +
Sbjct: 126 YIGAVEAIPGIVPLVERLRDAGAAYELDGDVYFSVEADPDFGGVSHLDAAAMRALSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FDI GG
Sbjct: 186 GDPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDIQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
IRLA+L HYR ++T L +AE L++W + +
Sbjct: 301 -RRAGVDPAAIRLALLAHHYRANWEWTDDVLAQAEARLARWRAAVSRPDGLP 351
>gi|119716853|ref|YP_923818.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
gi|310947208|sp|A1SJZ6|MSHC_NOCSJ RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|119537514|gb|ABL82131.1| cysteinyl-tRNA synthetase [Nocardioides sp. JS614]
Length = 397
Score = 216 bits (549), Expect = 7e-54, Method: Composition-based stats.
Identities = 109/340 (32%), Positives = 172/340 (50%), Gaps = 20/340 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T + R+YVCG T YD H+G+A + FD+L R R +
Sbjct: 1 MALHDTPSARKVTTTP--DGPARLYVCGITPYDATHLGHASTYVAFDLLNRAWRNAGHD- 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N+TD+DD ++ERA + H + + T+ F +D L + P H
Sbjct: 58 -VTYVQNVTDVDDPLLERAAKVHVD------WVELAERETELFRQDMAALRVIPPDHYVG 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
A IP +I LI + G Y +++ F ++ P +G+ S + P
Sbjct: 111 AVESIPLVIELIGRLETAGAIYRVEDDLYFSVTADPAFGAESGWDRERMLEIYPERGGDP 170
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
++ KK+P D ++W+ EP WESPWG GRPGWH+EC+A++ +LG FD+ GGG DL
Sbjct: 171 DRPGKKDPLDCVVWRGRREGEPSWESPWGPGRPGWHVECTAIAQRHLGGAFDVQGGGSDL 230
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+FPHHE + A A ++ H G + +G KMSKS GN + ++ L +
Sbjct: 231 VFPHHEMCAGHAQVAVPGTPFAQVYSHGGMVGYDGEKMSKSRGNLVFVSALRNSDV---- 286
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L H+R ++T +L A +++W +
Sbjct: 287 --DPMAIRLALLRHHFRSDWEWTDDQLWVAVDDIARWRKA 324
>gi|308160745|gb|EFO63218.1| Cysteinyl-tRNA synthetase [Giardia lamblia P15]
Length = 645
Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats.
Identities = 121/427 (28%), Positives = 185/427 (43%), Gaps = 53/427 (12%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
I N+L ++ E + PS + Y+CGPTVYD H+G+AR + FDV+ R+ Y V
Sbjct: 10 ITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDVIRRIFED-YFGLRV 68
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y NITD+DDKII RA + S I + K Q+F D L+ T R T
Sbjct: 69 HYQCNITDVDDKIIARAVERGSS------IFDVCRKYEQEFFSDMRTLSVRPFTVVTRVT 122
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP------ 180
++ +I IQ I+ +G AY + + FD N G + +
Sbjct: 123 EYMADIILFIQKIMDNGFAYVSAGSVYFDVVVARNAGYSYPKLRPLGSSSDELQLLIQNA 182
Query: 181 -------EKYHKKNPADFILWKRSTPMEP---GWESPWG------------RGRPGWHIE 218
K++ +DF LWK EP W++ + GRPGWHIE
Sbjct: 183 DGVDSKNRVSEKRSSSDFALWKAWKETEPEDAKWDATFSRKNGAVSELITLPGRPGWHIE 242
Query: 219 CSAMSS----HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
CSAM++ FD+H GG DL FPHH+NE+ Q + + ++H+G L +
Sbjct: 243 CSAMAAAALGKNTEGAFDLHLGGCDLQFPHHDNELIQLETWAKKKNMIGCFLHSGHLKIA 302
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G MSKS NF T+ E+L + A +R+ M Y +D+++ + A
Sbjct: 303 GDVMSKSKKNFKTVREVLNI-------FTANQVRMLFCMVPYSASLDYSISMMDAAVAKD 355
Query: 335 SKW-------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
K Q + + + + YN + Q + L+ + + I +A
Sbjct: 356 KKITSFLSNCRQIIQHEEELSEPIKNLRYNTMEETLEAQTIEFLSNVDIAFRNDISIVSA 415
Query: 388 SAHILGI 394
HI+ +
Sbjct: 416 MNHIMSL 422
>gi|325185588|emb|CCA20071.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 656
Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats.
Identities = 142/547 (25%), Positives = 209/547 (38%), Gaps = 122/547 (22%)
Query: 9 NTLERKITEFQAIDPSNIR--------------MYVCGPTVYDFAHIGNARPMIVFDVLY 54
N+L R + + + Y CGPTVYD AH+G+AR + D++
Sbjct: 27 NSLTRSLQQVVPPIDHKLGGKQSDIEDTSCIRKWYACGPTVYDRAHLGHARAYVSQDIIR 86
Query: 55 RLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
R++ +G V +TDIDDKII+RA++ + QF D RL
Sbjct: 87 RIIERQFG-ISFFLVMGVTDIDDKIIQRAKERQI------HYLELARAEESQFFYDLDRL 139
Query: 115 ACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN--EIIFDTSSIPNYG---SFSRRK 169
P R + H+ ++I I+ I+L+G AY A++ + FDT + S+
Sbjct: 140 GVRRPHAVTRVSEHVEEIIRFIERIVLNGFAYIASDVSGVYFDTEQLGTEYGKLDPSQGS 199
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRSTPM--EPGWESPWGRGRPGWHIECSAMSSHYL 227
E + KKNP DF+LWK EP WESPWG GRPGWHIECSAM + L
Sbjct: 200 SVEAVELMYESKDSIKKNPKDFVLWKTVKEPQNEPCWESPWGLGRPGWHIECSAMIHYVL 259
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADR------------IEKTANIWIHNGFLNLEG 275
G D+H GG+DL FPHH NEIAQS + E ++H G L ++G
Sbjct: 260 GDKIDLHTGGIDLRFPHHNNEIAQSEAHNYPQNKTCCSVHQINEPWCRHFLHFGHLYIQG 319
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
+KMSKS NF TI LE A R+ L YR I ++ +R+ +A +
Sbjct: 320 QKMSKSLKNFTTIEAFLE-------KHTADQFRVFCLQYKYRSNIHYSSERMRDAAAFID 372
Query: 336 KWPQTSTSKGIIDPAVLS--------------------------ALYNDLNTVSAIQALH 369
K + S L +D +T SA+Q +
Sbjct: 373 KLCNFFRNVEAYSSHESSEASKKCTDLDLEILKALFHAKERVSICLADDFDTPSALQHIS 432
Query: 370 KLARESTKNH-------------DLLPIFNASAHILGIEVCKEHLNKN------------ 404
K+ + + + + G+ E
Sbjct: 433 KMVSRANEYLLTRQEHNPIEIRMAIAQYVLDVLELFGMRQLYEEFAHLGDQKVIRKISDS 492
Query: 405 ----------ISIAIEKLVQERLILLKMKKFS----------SADYIR-KQLESKGFILE 443
+ ++ +V R + + + D R L S G L+
Sbjct: 493 ERRSESSGIRLDGLMQAVVDFRAQVRQR---ALEEGSSSILELCDAFRNDALPSLGIQLK 549
Query: 444 DYKNPDN 450
D +
Sbjct: 550 DLGSGRT 556
>gi|315506205|ref|YP_004085092.1| cysteine/1-d-myo-inosityl 2-amino-2-deoxy-alpha-d-glucopyranoside
ligase [Micromonospora sp. L5]
gi|315412824|gb|ADU10941.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Micromonospora sp. L5]
Length = 412
Score = 216 bits (549), Expect = 8e-54, Method: Composition-based stats.
Identities = 121/409 (29%), Positives = 191/409 (46%), Gaps = 34/409 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y++ + + MYVCG T YD H+G+A MI FD++ R+ R +
Sbjct: 18 SLRLYDSARQGAHPSRP--EGAASMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H
Sbjct: 76 --VRYVQNVTDIDDPLLERAERDG------EDWKVLAMRETALFREDMEALRMIPPAHYV 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
A IP + + ++ G AY + ++ FD S+ P +G S ++
Sbjct: 128 GAVESIPDIAEKVLMLLKDGAAYRLDDGTGDVYFDISAAPRFGYESNLTREQMIELFAER 187
Query: 181 EKY----HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K++P D +LW+ + EP W G GRPGWHIEC+ ++ + LG D+ G
Sbjct: 188 GGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQG 247
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + A+ ++H G + L+G KMSKS GN + ++ L
Sbjct: 248 GGNDLIFPHHECSAAHAERLTGEAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRAD- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--- 352
+RLA++ HYR +T LTEA+ L +W + + + A L
Sbjct: 307 -----KVDPMAVRLALMSGHYRSDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAA 361
Query: 353 --SALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFN-ASAHILGI 394
L +DL+T A+ A A T + +F +LGI
Sbjct: 362 VRERLADDLDTPGALAAADSWAEGALNGVTDDETAPALFRDTVDALLGI 410
>gi|167465001|ref|ZP_02330090.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 317
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 119/333 (35%), Positives = 163/333 (48%), Gaps = 47/333 (14%)
Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
+YG S + +DE + G R+ K+NP DF+LWK + P E W SPWG GRPGWHIE
Sbjct: 1 FADYGKLSHQNLDELQYGIRIEVDERKENPQDFVLWKAAKPGEVYWSSPWGNGRPGWHIE 60
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
CSA+ YLG+ DIHGGG+DL FPHHE EIAQ+ + A W+HN FLN++ KM
Sbjct: 61 CSALVHKYLGETIDIHGGGVDLTFPHHECEIAQTEALT-CKPMAKYWLHNAFLNIDNEKM 119
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
SKS GN + + E+L + V+RL M+M HYR I+F L +A L +
Sbjct: 120 SKSLGNGVLVREIL-------KRVKPQVLRLFMMMAHYRNQINFNSDGLEQAANGLERIM 172
Query: 339 QTSTSKG--------------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ T+ I + + +D NT AI A+ +L E+
Sbjct: 173 NSVTNLKHRLKIAQEGPADEQVKNRIQAIKAQFEAKMNDDFNTPDAITAVFELVSEANNT 232
Query: 379 HD-----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
LL F + +LGI + + IEKL+ ER + K ++
Sbjct: 233 LKEERVNVSTLEMLLDQFKSFDTVLGIL--EPEETDLMDEEIEKLIAERTEARRAKNWAR 290
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD IR L KG +LED + RW+QK
Sbjct: 291 ADEIRDILTEKGILLEDT------PQGIRWRQK 317
>gi|325179782|emb|CCA14185.1| cysteinyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 703
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 148/583 (25%), Positives = 206/583 (35%), Gaps = 151/583 (25%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L R F I + Y+CGPTVYD H+G+ R FD R+L Y
Sbjct: 35 LKLYNSLTRTKNHFIPIHGKRVLWYMCGPTVYDQTHLGHGRTYTCFDYARRILED-YFGY 93
Query: 65 CVTYVRN---------ITDIDDKIIERARQEH---------------------PSIPIND 94
V V N RA +
Sbjct: 94 EVELVMNITDIDDKII---------IRAAENGWKQANPGEDLPTNTEQRVRKVMEWASEQ 144
Query: 95 AISI-------ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ ++ F+ D L PT R + ++ +I L+Q II +G AYE
Sbjct: 145 SAEENMKRTKDLSQFWEASFLHDMASLGIKIPTVITRVSEYVDDIILLVQGIINNGFAYE 204
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQK---------------MGTRVPEKYHKKNPADFI 192
+N + FDT++ + K+ + + K+ +DF+
Sbjct: 205 SNGSVYFDTNTFSQSSGKAYGKLLPENIGQSDLLAEGEGSLAANPTLLGNSDKRGASDFV 264
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSS----HYLGKVFDIHGGGLDLIFPHHENE 248
LWK+S EP W SPWG GRPGWHIECSAM+S + DIH GG+DL FPHH+NE
Sbjct: 265 LWKKSKNGEPFWVSPWGPGRPGWHIECSAMASSTLQRFADGQIDIHSGGIDLRFPHHDNE 324
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
IAQS + N ++H G LN+EG KMSKS NF+ I + L + +R
Sbjct: 325 IAQSEAYFNFSQWINYFLHTGHLNIEGLKMSKSLKNFVKIKDALMDH-------SSRQLR 377
Query: 309 LAMLMTHYREPIDFTVQRLTEA----------------------EILLSKWPQTSTSKGI 346
L+ Y P+D+ + EA +W Q
Sbjct: 378 FLFLLHKYNVPMDYNDHSVEEAVVVDRFFNEFFQNVKVQLRLLGMTNAQRWEQRDIQLHD 437
Query: 347 I----DPAVLSALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNAS 388
V AL NDLNT AI L +LA+E ++ +
Sbjct: 438 AIVACKENVHQALANDLNTPQAILHLQQLAKEVSRYMASSQEHNKVSLLIRSAAEYVTSI 497
Query: 389 AHILGIEV-----------CKEHLNKNISIAI---------EKLVQERLILL-------- 420
I G+ E I E + R +
Sbjct: 498 FRIFGLIQGGSDIGFPLTNSSEEGAAVNEETILTPVLDIFSEFRDEIRELARAGTTGEID 557
Query: 421 ----KMKKFSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
K D +R + L G LED N WK
Sbjct: 558 GKALAAKILHVCDSVRDEKLPHAGIRLEDRANTKA-----IWK 595
>gi|302867391|ref|YP_003836028.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Micromonospora aurantiaca ATCC 27029]
gi|302570250|gb|ADL46452.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Micromonospora aurantiaca ATCC 27029]
Length = 412
Score = 215 bits (548), Expect = 1e-53, Method: Composition-based stats.
Identities = 121/409 (29%), Positives = 192/409 (46%), Gaps = 34/409 (8%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++Y++ + + MYVCG T YD H+G+A MI FD++ R+ R +
Sbjct: 18 SLRLYDSARQGAHPSRP--EGAASMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGLD 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H
Sbjct: 76 --VRYVQNVTDIDDPLLERAERDG------EDWKVLAMRETALFREDMEALRMIPPAHYV 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
A IP + + ++ G AY + ++ FD S+ P +G S ++
Sbjct: 128 GAVESIPDIAEKVLMLLKDGAAYRLDDGTGDVYFDISAAPRFGYESNLTREQMIELFAER 187
Query: 181 EKY----HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K++P D +LW+ + EP W G GRPGWHIEC+ ++ + LG D+ G
Sbjct: 188 GGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECTVIALNLLGDRIDVQG 247
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHE A + A+ ++H G + L+G KMSKS GN + ++ L
Sbjct: 248 GGNDLIFPHHECSAAHAERLTGEAPFADHYVHAGMIGLDGEKMSKSQGNLVFVSRLRAD- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL--- 352
+RLA++ HYR +T LTEA+ L +W + + + A L
Sbjct: 307 -----KVDPMAVRLALMSGHYRSDRSWTDDLLTEAQERLGRWRRAAAAPAGPSGAALLAA 361
Query: 353 --SALYNDLNTVSAIQALHKLA----RESTKNHDLLPIFN-ASAHILGI 394
L +DL+T A+ A + A T + +F +LGI
Sbjct: 362 VRERLADDLDTPGALAAADRWAEGTLNGVTDDETAPALFRDTVDALLGI 410
>gi|319949266|ref|ZP_08023346.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
gi|319437056|gb|EFV92096.1| cysteinyl-tRNA synthetase [Dietzia cinnamea P4]
Length = 399
Score = 215 bits (547), Expect = 1e-53, Method: Composition-based stats.
Identities = 124/410 (30%), Positives = 187/410 (45%), Gaps = 36/410 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+++T ++ E MYVCG T YD H+G+A + FD++YR L E
Sbjct: 1 MKLFDTAGGEVREVSP--GPVAGMYVCGITPYDTTHLGHAATYLTFDLVYRQLLDAGHE- 57
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N TD+DD + ERA ++ + + T F +D L L P
Sbjct: 58 -VHYVQNTTDVDDPLFERAERDGVD------WRELGDRETDLFREDMEALRVLPPRDYVA 110
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQK---- 174
AT I +++ ++ ++ GHAY + +++ + + ++G S DE
Sbjct: 111 ATETIDEVVEMVGELLDRGHAYRIDPDVDGYSDVYYRHRATADFGYESGYDDDEMAVAFA 170
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
P++ K++P D +LW+ P EP W SPWG GRPGWHIECSA++ + LG FDI
Sbjct: 171 ERGGDPDRPGKEHPLDALLWRVERPGEPSWPSPWGAGRPGWHIECSAIARNRLGMEFDIQ 230
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHE A + A A ++H + L+G KMSKS GN + + L +
Sbjct: 231 GGGSDLAFPHHEFSAAHAEAAAGRRPFARFYVHAAMIGLDGVKMSKSLGNLVRVQALRD- 289
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW-----PQTSTSKGIIDP 349
R +IRL + HYR ++ L A W +
Sbjct: 290 -----RGVDPALIRLGLFAGHYRVDRSWSDDLLERARTRYDLWCRVIARGVGADAAPVIA 344
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDL-----LPIFNASAHILGI 394
+ L +DL+T A+ + A + D I A +LGI
Sbjct: 345 ELRERLADDLDTPGALAVVDAWASATLDGDDSDPSAGAGIATALDALLGI 394
>gi|119964010|ref|YP_947911.1| cysteinyl-tRNA synthetase [Arthrobacter aurescens TC1]
gi|310947171|sp|A1R6P9|MSHC_ARTAT RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|119950869|gb|ABM09780.1| putative cysteinyl-tRNA synthetase (cysS) [Arthrobacter aurescens
TC1]
Length = 425
Score = 214 bits (546), Expect = 2e-53, Method: Composition-based stats.
Identities = 120/427 (28%), Positives = 187/427 (43%), Gaps = 49/427 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++Y+T ++ + + MYVCG T YD H+G+A + FD+L R R
Sbjct: 16 MPQLRLYDTALGRVVDVE--RQPEQSMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V+YV+N+TDIDD ++ERA + F D L LAP H
Sbjct: 74 --VRVSYVQNVTDIDDPLLERATATGVD------WRELAQSQIDLFQTDMDALNVLAPNH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSF--------- 165
A IP ++ I+ +I G AY + ++ +D +
Sbjct: 126 YIGAVEAIPDIVPAIEQLIADGVAYRVAGSEGEPDGDVYYDVETAGKRSDATDAWTLGDV 185
Query: 166 ----SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECS 220
+ ++ P + K++ D +LW+ + EP W S G GRPGWHIEC+
Sbjct: 186 SGLGEKEMLELFAERGGDPTRAGKRHALDPLLWRVARDGEPSWPGSTLGDGRPGWHIECT 245
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
++ YL F + GGG DL+FPHHE + + A + H G + L+G KMSK
Sbjct: 246 VIAQKYLPAPFTVQGGGSDLVFPHHEMGAGHAYSLSGV-PLARHYSHAGMVGLDGEKMSK 304
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
S GN + +++L + IRLA+L HYR +T EA+ L +W
Sbjct: 305 SKGNLVLVSKLRAAGEE------PAAIRLAILAHHYRSDWSWTDAEFAEAKDRLKQWRAA 358
Query: 341 STS-----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIFNASA 389
+ A+ L NDLN AI A+ A E+ ++ D + +A
Sbjct: 359 LDHAPAGSAAALISAMRDELANDLNAPGAIAAVDHWAAEAIRSGSDKSEQDTALVTDAID 418
Query: 390 HILGIEV 396
+LG+E+
Sbjct: 419 ALLGVEL 425
>gi|296393640|ref|YP_003658524.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Segniliparus rotundus DSM 44985]
gi|310947218|sp|D6ZFG9|MSHC_SEGRD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|296180787|gb|ADG97693.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Segniliparus rotundus DSM 44985]
Length = 420
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 115/419 (27%), Positives = 196/419 (46%), Gaps = 42/419 (10%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++++ +R + + P MYVCG T YD H+G+A + FD+++RL
Sbjct: 17 PRLRLWDSADR---IIRPVTPGRTATMYVCGITPYDATHLGHAATYLAFDLVHRLWLDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ V Y +NITD+DD ++ERA ++H + ++ + F D + L L P
Sbjct: 74 HQ--VAYAQNITDVDDPLLERADRDHRD------WQELAAEQIELFRTDMSALRVLPPHE 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR--------KIDEQ 173
T + ++ +++ ++ + AY D
Sbjct: 126 YVGVTESVGLVVAMVEKLLANQSAYVVAEGEYPDVYHRIAATEDFGYVSGYGREEMAQVF 185
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ P++ K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++ +G FD+
Sbjct: 186 RERGGDPDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGFDV 245
Query: 234 HGGGLDLIFPHHENE------IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
GGG DL+FPHHE + AD + A ++H G + L+G KMSKS GN +
Sbjct: 246 QGGGSDLVFPHHEFSAAHAQAQHGAGAADEHRRFARNYVHAGMIGLDGEKMSKSLGNLVF 305
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-- 345
++ L E R IRLA+ HYR + L EA+ L++W ++
Sbjct: 306 VSALRE------RGVDPSAIRLALFAGHYRADRSWDQGLLREAQERLARWRHAASLASGP 359
Query: 346 ---IIDPAVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIF-NASAHILGIEV 396
+ + L NDL+T A+ AL + E+ + + + A+ +LG+++
Sbjct: 360 AAHDVVARMREHLANDLDTPKALAALDSWSLEAAAHGGGDQEAPALVARAADALLGVQL 418
>gi|305681204|ref|ZP_07404011.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium matruchotii ATCC 14266]
gi|305659409|gb|EFM48909.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Corynebacterium matruchotii ATCC 14266]
Length = 419
Score = 214 bits (545), Expect = 2e-53, Method: Composition-based stats.
Identities = 117/388 (30%), Positives = 189/388 (48%), Gaps = 33/388 (8%)
Query: 5 IKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T + + + + MYVCG T YD H+G+A + FD+++RLL
Sbjct: 19 LRLYDTAD---ETLKPVRVTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLLIDAG- 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+NITD+DD + ERA ++ + S F D L+ + P
Sbjct: 75 -VQVTYVQNITDVDDPLFERATRDGVD------WRELGSSQIDLFRSDMADLSVIPPHDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A + ++I ++Q ++ G AY ++ D + + + +
Sbjct: 128 VGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELFA 187
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ + EP W++P+G GRPGWH+ECSA++++ LG F I
Sbjct: 188 ERGGDPDRPGKRDPLDALLWRAAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G ++L+G KMSKS GN + +++L E
Sbjct: 248 GGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLTEA 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ID 348
IRL + + HYR D++ + L AE L W +T +
Sbjct: 308 ------GHDPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARALV 361
Query: 349 PAVLSALYNDLNTVSAIQALHKLAREST 376
+ S L +DLNT +AI+A+ + A
Sbjct: 362 QQIRSLLADDLNTPAAIKAIDEWADSCN 389
>gi|304373037|ref|YP_003856246.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
gi|304309228|gb|ADM21708.1| Cysteinyl-tRNA synthetase [Mycoplasma hyorhinis HUB-1]
gi|330723349|gb|AEC45719.1| cysteinyl-tRNA synthetase [Mycoplasma hyorhinis MCLD]
Length = 400
Score = 214 bits (544), Expect = 3e-53, Method: Composition-based stats.
Identities = 128/413 (30%), Positives = 200/413 (48%), Gaps = 29/413 (7%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
+YVCGPTVYD+ HIGN RP++ D+L R+ Y + + ++ NIT+IDDKII++A E
Sbjct: 6 NIYVCGPTVYDYIHIGNLRPILTIDILNRV--KKYFKYELFFLHNITNIDDKIIKKAILE 63
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
N + I+ + ++K PT + TN + + I + G Y
Sbjct: 64 ------NKTEAEISEFYYKDYMKKLKLFNIQKPTKIVKVTNELNTIKNYIYLLQKQGFTY 117
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ N+++ F+TS + NYG S +KI+ ++ +K N DF+LWK++T + + S
Sbjct: 118 QENDDLYFNTSKVKNYGHISGQKINSLVSSSKTQ---YKSNANDFVLWKKTT-LGIKYYS 173
Query: 207 PWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
G GRPGWH ECSA+ Y K DIH GG+DLIFPHHENE AQ + + W
Sbjct: 174 LLGLGRPGWHTECSALIFKYFNKQTIDIHSGGIDLIFPHHENENAQHFALTK-KNITKKW 232
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+H G + + KMSKS N ++ +E + V R +L + PID T +
Sbjct: 233 VHVGQIKINNEKMSKSLNNVFLVDNFVE-------KYHPDVYRHILLTSSISGPIDLTNE 285
Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLL 382
L + + ++ + I L +YN + + + +E KN D
Sbjct: 286 LLEANKNKIIQYKKAFFEHLINPRKSLKKVYNPILKLFLQSKFAQANKELNLLLKNKDYA 345
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
+ ++LG + LNK L+++ L K + AD IR++L
Sbjct: 346 N-LSFIFNVLGFIFATKKLNKTDF----ALLEKWKKLKSEKNYQKADKIREKL 393
>gi|66818080|ref|XP_642733.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74997262|sp|Q54ZY3|SYCM_DICDI RecName: Full=Probable cysteinyl-tRNA synthetase, mitochondrial;
AltName: Full=Cysteine--tRNA ligase; Short=CysRS; Flags:
Precursor
gi|60470862|gb|EAL68834.1| cysteinyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 583
Score = 213 bits (542), Expect = 5e-53, Method: Composition-based stats.
Identities = 134/466 (28%), Positives = 199/466 (42%), Gaps = 75/466 (16%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
I Y CGPTVY +HIG+AR + D++ R+L Y + +V +TDIDDKII +++Q
Sbjct: 77 ISWYTCGPTVYSSSHIGHARNYMTVDIIQRILI-NYFRFNIIHVMGLTDIDDKIINKSKQ 135
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
E S S ++ K Q+F +D L P R + HI ++I I+ I +
Sbjct: 136 ELISA------SELSKKFEQEFFEDLKSLNIKPPMFTTRVSEHIDEIIKYIEKIKENQLT 189
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP------ 199
YE+ +IFD + S R ++Q + KK+ DF+LWK
Sbjct: 190 YESTKSVIFDVNKFGIDRYCSLRAANQQIKSDDTLLEKDKKSSQDFVLWKAYNENIDIDG 249
Query: 200 --MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
W+SP+G+GRPGWHIECSAM D+H GG+DL FPHH+NEIAQ
Sbjct: 250 TGNPVCWDSPFGKGRPGWHIECSAMIDSIFKDHLDVHSGGVDLEFPHHQNEIAQCEGHSH 309
Query: 258 IE--------KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
+ AN + H G L L KMSKS GN ITI + L + A +R
Sbjct: 310 SHGSGDAESTQWANYFFHIGHLILNNEKMSKSLGNVITIRDFLSR-------YSANSLRW 362
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---------------------------- 341
L+ Y +P+ F+ + L K+
Sbjct: 363 ICLIHKYNDPLSFSDETLQLCISKEIKFLNWFKIVRSKLKLEQTSVNKVKKTFNHSIELL 422
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHIL 392
+ L +D NT S I+ L L +++ ++ + + + +I
Sbjct: 423 NQLSETKYLIEKDLKDDFNTPSVIKRLELLMKQTNESMNSIDTDLLFNVQDYVESILNIF 482
Query: 393 GIEVCKEHLNKNISIA-----IEKLVQERLILLK-MKKFSSA-DYI 431
G+EV E + N + +EKL+ R + K + D I
Sbjct: 483 GLEVNSEISDHNKTDESNQFLLEKLLDFRSDVKNLAKN-EKSLDQI 527
>gi|282864361|ref|ZP_06273417.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. ACTE]
gi|282560848|gb|EFB66394.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. ACTE]
Length = 409
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 116/381 (30%), Positives = 191/381 (50%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGR---ITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDG------EDWAELAERETALFREDMTALRMLPPKH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ ++ G AYE + ++ F S P++G S + +
Sbjct: 126 YIGAVEAIPGIVPLVERLLDAGAAYELDGDVYFSVGSDPHFGGVSHLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ WHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAARDGEPSWDGGRLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHE + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLVFPHHEMGASHAQALTGEYPFAQAYVHAGMVGLDGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST-----SKGIIDPAV 351
IRL++L HYR ++T Q L +A L++W + + V
Sbjct: 301 -RRDGVDPAAIRLSLLAHHYRSDWEWTDQVLADAVERLARWRAAVSRPDGLPADALVDEV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
AL +DL++ +A+ A+ + A
Sbjct: 360 REALADDLDSPAALAAVDRWA 380
>gi|260903707|ref|ZP_05912029.1| cysteinyl-tRNA synthetase [Brevibacterium linens BL2]
Length = 419
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 109/414 (26%), Positives = 177/414 (42%), Gaps = 39/414 (9%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++T R + D + +YVCG T YD H+G+A + FD+L R+ R +
Sbjct: 20 TVFDTGTRSPRRLKGRDQA-AGLYVCGITPYDATHLGHAATYVAFDLLNRVWRDAGLD-- 76
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N TD+DD ++ERA + + F +D + L L P
Sbjct: 77 VVYVQNTTDVDDPLLERADATGVD------WRELAESQIELFREDMSALRVLPPQSYIGV 130
Query: 126 TNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSS-IPNYGSFSRRKIDEQKMGTRVPEKY 183
+ Q++ +++++ AY N ++ + S+ I
Sbjct: 131 VESVDQIVKAVEDLVDSRAAYTLDNGDVYYRVSTPINPPFGSVSHDDRATMAKLSAERGG 190
Query: 184 HKKNPA-----DFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ P D +LWK + EP W+ G GRPGWHIEC+ ++ Y G D+ GGG
Sbjct: 191 DPETPGKDNEIDPLLWKAAREGEPSWDGGKLGPGRPGWHIECTVIADKYAGLPVDVQGGG 250
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHE A + A + A ++H G + +G KMSKS GN + +++L E
Sbjct: 251 SDLVFPHHEMSAAHA-AAWKQTPLARTYMHTGMVGYQGEKMSKSKGNLVLVSKLRE---- 305
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA------- 350
+ VIR +L HYR +FT L A L W + +
Sbjct: 306 --QGVDPMVIRTVLLSNHYRSDWNFTEDLLETASARLKAWRHAAMCEAECREGLRGHIIG 363
Query: 351 -VLSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
+ +L +DL++ A+ L + A + + +A +LGI +
Sbjct: 364 LLRESLADDLDSPRALGILDEWAEHYADSPAAETAPVCGDRVADAVDALLGINL 417
>gi|225021443|ref|ZP_03710635.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
ATCC 33806]
gi|224945825|gb|EEG27034.1| hypothetical protein CORMATOL_01463 [Corynebacterium matruchotii
ATCC 33806]
Length = 419
Score = 213 bits (542), Expect = 6e-53, Method: Composition-based stats.
Identities = 117/392 (29%), Positives = 189/392 (48%), Gaps = 33/392 (8%)
Query: 5 IKIYNTLERKITEFQAI--DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++Y+T + + + + MYVCG T YD H+G+A + FD+++RLL
Sbjct: 19 LRLYDTAD---ETLKPVRVTHNQAGMYVCGITPYDSTHLGHAATYLAFDLIHRLLIDAG- 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+NITD+DD + ERA ++ + S F D L+ + P
Sbjct: 75 -VQVTYVQNITDVDDPLFERATRDGVD------WRELGSSQIDLFRSDMADLSVIPPQDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A + ++I ++Q ++ G AY ++ D + + + +
Sbjct: 128 VGAMESVGEVITMVQQLLDAGAAYVVDDPDYPDIYASITATDRFGYESNYPRQRMLELFA 187
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ + EP W++P+G GRPGWH+ECSA++++ LG F I
Sbjct: 188 ERGGDPDRPGKRDPLDALLWRVAREGEPAWDAPFGAGRPGWHVECSAIATNRLGSSFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + A ++H G ++L+G KMSKS GN + +++L E
Sbjct: 248 GGGSDLIFPHHEFSAAHAEAALASPRMAEHYVHTGMISLDGVKMSKSLGNLVFVSKLTEA 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------ID 348
IRL + + HYR D++ + L AE L W +T +
Sbjct: 308 ------GHDPSAIRLGVYLGHYRSDRDWSDKVLWAAEHRLVYWRMATTLASDESAARALV 361
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ S L +DLNT +AI+A+ + A
Sbjct: 362 QQIRSLLADDLNTPAAIKAIDEWADSCNATAT 393
>gi|239932256|ref|ZP_04689209.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291440619|ref|ZP_06580009.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291343514|gb|EFE70470.1| cysteinyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 409
Score = 213 bits (541), Expect = 7e-53, Method: Composition-based stats.
Identities = 114/343 (33%), Positives = 168/343 (48%), Gaps = 21/343 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++I++T R+YVCG T YD HIG+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGPVTLAP--GPVARIYVCGITPYDATHIGHAATYNAFDLVQRV--WLDT 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L L P H
Sbjct: 73 KRQVHYVQNVTDVDDPLLERAERDGLD------WAALAEQETALFREDMTALRMLPPRHY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTR 178
A IP ++ L++ + G AYE +I F S P++G S +
Sbjct: 127 TGAVEAIPGIVPLVERLRDLGAAYELEGDIYFSVESDPHFGQVSHLDAAAMRLLSAERGG 186
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GGG
Sbjct: 187 DPDRPGKKNPVDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALEHLGMGFDVQGGG 246
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHE + + A ++H G + L G KMSKS GN + + +
Sbjct: 247 SDLIFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFV------SRL 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T Q L +A L W
Sbjct: 301 RRDGVDPAAIRLALLAHHYRADWEWTDQVLQDAVTRLGHWRAA 343
>gi|291450490|ref|ZP_06589880.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
gi|291353439|gb|EFE80341.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
Length = 409
Score = 212 bits (540), Expect = 9e-53, Method: Composition-based stats.
Identities = 120/381 (31%), Positives = 194/381 (50%), Gaps = 28/381 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T+ + + P + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTVTGGP---KTLTPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + T F +D T L + P
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAVRDGVE------WTGLAERETALFREDMTALRMIPPRD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP++I L++ + G AYE ++ F + P++G S +
Sbjct: 126 YIGAVEAIPRIIPLVERLRDAGAAYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ G+GRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWMAAREGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHE + + A A+ ++H G + L+G KMSKS GN + ++ L
Sbjct: 246 GSDLVFPHHEMGASHAHAATGEYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAV 351
IRLA+ HYR ++T L EA L++W + D V
Sbjct: 301 -RRAGVEPAAIRLALHAHHYRADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVEQV 359
Query: 352 LSALYNDLNTVSAIQALHKLA 372
+AL +DL+ +A++A+ A
Sbjct: 360 RAALADDLDAPAALRAVDAWA 380
>gi|294628495|ref|ZP_06707055.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. e14]
gi|292831828|gb|EFF90177.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. e14]
Length = 409
Score = 212 bits (539), Expect = 1e-52, Method: Composition-based stats.
Identities = 112/343 (32%), Positives = 172/343 (50%), Gaps = 21/343 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ ++I++T + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGLVTLTP--GPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLDT 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
++ V YV+N+TD+DD ++ERA+++ + + T F +D T L L P H
Sbjct: 73 KRQVHYVQNVTDVDDPLLERAQRDDLD------WVALAERETALFREDMTALRMLPPRHY 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTR 178
A IP ++ L++ + G AYE + ++ F S P++GS SR +
Sbjct: 127 IGAVEAIPGIVPLVERLRDLGAAYELDGDVYFSVESDPHFGSVSRLDAAAMRLLSAERGG 186
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ KKNP D +LW + EP W+ G GRPGWHIEC A++ +LG FD+ GGG
Sbjct: 187 DPDRPGKKNPLDPMLWMAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGGG 246
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHHE + + A ++H G + L+G KMSKS GN + + +
Sbjct: 247 SDLAFPHHEMGASHAQVLTGEFPMAKAYVHAGMVALDGEKMSKSKGNLVFV------SRL 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T Q L +A L +W
Sbjct: 301 RRDGVDPAAIRLALLAHHYRSDWEWTDQVLQDAVARLGRWRAA 343
>gi|320165548|gb|EFW42447.1| cysteine-tRNA ligase [Capsaspora owczarzaki ATCC 30864]
Length = 582
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 144/518 (27%), Positives = 216/518 (41%), Gaps = 95/518 (18%)
Query: 8 YNTLERKITEFQA------------IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYR 55
YN L R + + + P+ + Y+CGPTVYD AH+G+A + FD++ R
Sbjct: 74 YNALTRSVAPLLSPDSNSNSHTRSDLTPNTLSWYICGPTVYDEAHLGHASCYVRFDIIRR 133
Query: 56 LLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLA 115
+L G V + +TDIDDKII +A N + S + + + FV+D
Sbjct: 134 ILTDRAG-LRVFQLMGMTDIDDKIIAKAA------STNRSHSEVARQFEESFVQDMA--- 183
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSI--PNYGSFSRRKIDE 172
P R T IP + I NII G Y ++ + FDT + D+
Sbjct: 184 VRPPDAISRVTESIPAIQQFITNIIERGFGYTASDGSVYFDTQAFGSRYGKLRPSATADK 243
Query: 173 QKMGTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGR--GRPGWHIECSAMSSHYLGK 229
P +K++P DF LWK + EPG+ SP+ + GRPGWHIECSA++ G+
Sbjct: 244 SSAEATEPADSNKRSPRDFALWKATKSASEPGYPSPFSQGLGRPGWHIECSAIA--VFGQ 301
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
DIH GG+DL+FPHHENEIAQ +++ A+ + H G L + KMSKS NF+TI
Sbjct: 302 HLDIHSGGIDLLFPHHENEIAQCEAHHGVDQWAHHFWHTGHLLINKEKMSKSLNNFVTIK 361
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
+ L RS+ + RL L+T+YR+ + F + + A L K Q
Sbjct: 362 DFL-------RSYTSNQFRLFCLLTNYRQSVHFDDKTMQGAIALERKLAQFGAVLQTAGA 414
Query: 350 AVLSAL-----------------------------YNDLNTVSAIQALHKLARESTKNHD 380
++ ND +T +A+QA L + D
Sbjct: 415 TGVAWDSPATRAWGTSEVALRDRILTFEATVDAALCNDFDTSTAMQAAMTLVHHTYLYLD 474
Query: 381 LL-----------PIFNASAHILGIEVCKEHLNK------------NISIAIEKLVQERL 417
+ + +L + C+ L+ S + Q R
Sbjct: 475 AVQGQQPNKLLVGSVARGIDGLLVLFGCQSLLSSPTTAASGAEAAALASAFADFRAQVRK 534
Query: 418 IL----LKMKK-FSSADYIRKQ-LESKGFILEDYKNPD 449
+ K+ F D R + GF L+D K+
Sbjct: 535 VAMANPKANKELFQLCDQARAETFPKLGFELQDNKSGW 572
>gi|15827673|ref|NP_301936.1| cysteinyl-tRNA synthetase [Mycobacterium leprae TN]
gi|221230150|ref|YP_002503566.1| cysteinyl-tRNA synthetase [Mycobacterium leprae Br4923]
gi|310947197|sp|B8ZRD9|MSHC_MYCLB RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|13093224|emb|CAC31683.1| cysteinyl-tRNA synthase [Mycobacterium leprae]
gi|219933257|emb|CAR71397.1| cysteinyl-tRNA synthase [Mycobacterium leprae Br4923]
Length = 384
Score = 211 bits (538), Expect = 1e-52, Method: Composition-based stats.
Identities = 119/389 (30%), Positives = 183/389 (47%), Gaps = 31/389 (7%)
Query: 25 NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
MYVCG T YD H+G+A + FD+++RL E V YV+N+TD+DD + ERA
Sbjct: 10 KATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERAD 67
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + + F D L L P AT I +++ L+ +++ G
Sbjct: 68 RNGVD------WRDLAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGA 121
Query: 145 AYEANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRS 197
AY ++ +I F + +G S D + P + K D +LW+ +
Sbjct: 122 AYVIDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGDPRRPGKNGELDALLWRAA 181
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W SP+G GRPGWH+EC+A++ +G DI GGG DLIFPHHE A + C
Sbjct: 182 RPGEPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAECVRG 241
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ A ++H G + + KMSKS GN + ++ L + P IRL +L HYR
Sbjct: 242 ERRFARHYVHAGMIGWDEHKMSKSRGNLVLVSTL------RAQGAPPSAIRLGLLAGHYR 295
Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTS-----KGIIDPAVLSALYNDLNTVSAIQALHKLA 372
++ Q L +A L +W ++ + V L +DL+T AI AL
Sbjct: 296 ADRFWSSQLLDDAIARLHRWRTAASMPAGPDVADVIARVRGYLADDLDTPKAIAALDGWV 355
Query: 373 RESTKN--HDLLP---IFNASAHILGIEV 396
++ + HD + A +LG+++
Sbjct: 356 TDALEYGGHDAAAPKLLATAIDALLGVDL 384
>gi|290961655|ref|YP_003492837.1| cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
gi|310947223|sp|C9Z2Z3|MSHC_STRSW RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|260651181|emb|CBG74302.1| putative cysteinyl-tRNA synthetase [Streptomyces scabiei 87.22]
Length = 409
Score = 211 bits (537), Expect = 2e-52, Method: Composition-based stats.
Identities = 115/344 (33%), Positives = 174/344 (50%), Gaps = 23/344 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T +DP + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTAT---DGLITLDPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + K T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERAARDDID------WVALAEKETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ ++ G AYE ++ F + P++G SR +
Sbjct: 126 YIGAVEAIPGIVPLVERLLASGAAYELEGDVYFSVEADPDFGKVSRLDAATMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ KKNP D +LW + EP W+ GRGRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPDRAGKKNPLDPMLWMAAREGEPSWDGGSLGRGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQALTGEFPMAKAYVHAGMVALHGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T Q L +A L +W
Sbjct: 301 -RRDGVDPAAIRLALLAHHYRADWEWTDQVLQDAVDRLGRWRAA 343
>gi|269124814|ref|YP_003298184.1| cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
gi|268309772|gb|ACY96146.1| Cysteine--tRNA ligase [Thermomonospora curvata DSM 43183]
Length = 372
Score = 211 bits (536), Expect = 2e-52, Method: Composition-based stats.
Identities = 120/373 (32%), Positives = 179/373 (47%), Gaps = 22/373 (5%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+ RMYVCG T YD H+G+AR + DV R+LR+ V RN+TD+DD ++ RA
Sbjct: 21 GHARMYVCGITPYDTTHLGHARTFVWADVAARVLRHAGN--TVKVCRNVTDVDD-VLTRA 77
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q S D+ + + F +D L + THQPRA N+I + I L Q ++ G
Sbjct: 78 AQRAGSPY--DSFAAVQQYY---FEQDMAALGVHSVTHQPRAHNYIRETIALAQALLDLG 132
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEP 202
HAY + F + +P R+ + PE K +P D LW+ S EP
Sbjct: 133 HAYLREGAVYFRGAHVPGQAGLDRQTALDLLAEYGDDPEDPRKDDPFDIALWRPSEAGEP 192
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W SPW GRPGWH EC++M+ G D+H GG DL FPHH E A + + A
Sbjct: 193 AWPSPWSAGRPGWHAECASMALAIFGPALDLHAGGADLRFPHHAYESALAEAMTGVRPFA 252
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+H G ++ +G KM+KS GN + + +LL + PA V+RLA+L T + + +
Sbjct: 253 RAWLHVGMVSKDGAKMAKSTGNLVFVADLL-------KEHPASVLRLALLSTPWAQEWHY 305
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
T L+ A L + + G A + L+ ++ AL+ +E +
Sbjct: 306 TPGDLSAAAARLDRLHTAAGRPGSSPAADEAVTAALLDDLNVDAALNIAEQEGGRTA--- 362
Query: 383 PIFNASAHILGIE 395
+ +L +E
Sbjct: 363 ---RTALSVLALE 372
>gi|226324504|ref|ZP_03800022.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
gi|225206952|gb|EEG89306.1| hypothetical protein COPCOM_02287 [Coprococcus comes ATCC 27758]
Length = 211
Score = 211 bits (536), Expect = 3e-52, Method: Composition-based stats.
Identities = 77/198 (38%), Positives = 110/198 (55%), Gaps = 11/198 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++NTL +K EF ++ +RMYVCGPTVY++ HIGNARPMIVFD + R Y +
Sbjct: 1 MKVFNTLTKKKEEFVPLEEGKVRMYVCGPTVYNYIHIGNARPMIVFDTVRRYFEYKGYD- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV N TD+DDKII++A +E S I+ + + KD + T P
Sbjct: 60 -VNYVSNFTDVDDKIIKKAIEEQVSA------QEISQRYIAECKKDMAGMNVKPATKHPL 112
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR---VPE 181
AT I M+ +I +I G+AYE N + F T +YG S + +D+ + G R V
Sbjct: 113 ATEEICGMVEMISELIDKGYAYEKNGTVYFSTRKFKDYGKLSHKNLDDLRSGGRSLLVSG 172
Query: 182 KYHKKNPADFILWKRSTP 199
+ K++P DF+LWK
Sbjct: 173 EDEKEDPLDFVLWKPKKK 190
>gi|240171407|ref|ZP_04750066.1| cysteinyl-tRNA synthetase [Mycobacterium kansasii ATCC 12478]
Length = 383
Score = 210 bits (535), Expect = 4e-52, Method: Composition-based stats.
Identities = 118/397 (29%), Positives = 181/397 (45%), Gaps = 35/397 (8%)
Query: 21 IDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
+ P MYVCG T YD H+G+A + FD+++RL + V YV+N+TD+DD +
Sbjct: 1 MTPGPKATMYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHD--VQYVQNVTDVDDPL 58
Query: 80 IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
ERA ++ + + + F D L L P AT + +M+ LI+ +
Sbjct: 59 FERADRDGVD------WRELADREVKLFRADMEALRVLPPHDYVAATEAVAEMVELIEKM 112
Query: 140 ILHGHAYEANNEI--IFDTSSI--------PNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ G AY + EI D G + + P + K +
Sbjct: 113 LASGAAYTVDPEIGDYPDIYYRADATVQFGYESGCDRDTMLTLFEQRGGDPSRPGKTDQL 172
Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
D +LW+ + EP W SP+G GRPGWH+EC+A++ + DI GGG DLIFPHHE
Sbjct: 173 DALLWRAARAGEPSWPSPFGPGRPGWHVECAAIALSRINSGLDIQGGGSDLIFPHHEFTA 232
Query: 250 AQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
A + C + A ++H G + +G KMSKS GN + ++ L + +RL
Sbjct: 233 AHAECVTGERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSTL------RAQGVEPSAVRL 286
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSA 364
+L HYRE +T Q L EA L +W + + V L +DL+T A
Sbjct: 287 GLLAGHYREDRFWTHQVLDEAAGRLQRWRTATALPAGPDAADVIARVRRYLADDLDTPKA 346
Query: 365 IQALHKLARESTKNHDL-----LPIFNASAHILGIEV 396
I AL A ++ + + A +LG+++
Sbjct: 347 IAALDGWATDALEYGGHDESAPTSVATAIDALLGVDL 383
>gi|255018754|ref|ZP_05290880.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
Length = 198
Score = 210 bits (534), Expect = 4e-52, Method: Composition-based stats.
Identities = 73/206 (35%), Positives = 116/206 (56%), Gaps = 8/206 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKASVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PR T ++ ++I +I +I G+AYE+ ++ F T +YG S +++ E + G RV
Sbjct: 113 PRVTENMDEIIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYN 172
Query: 183 YHKKNPADFILWKRSTPMEPGWESPW 208
K++ DF LWK + P E WESP+
Sbjct: 173 ERKQDELDFTLWKAAKPGEIFWESPF 198
>gi|302206181|gb|ADL10523.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis C231]
gi|308276423|gb|ADO26322.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis I19]
Length = 416
Score = 210 bits (534), Expect = 5e-52, Method: Composition-based stats.
Identities = 125/415 (30%), Positives = 204/415 (49%), Gaps = 40/415 (9%)
Query: 5 IKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T +R + ++ + +YVCG T YD H+G+A + FD++ R L
Sbjct: 19 LSLYDTADR---VIKPVNCSNGEVGVYVCGITPYDSTHLGHAATYLAFDLINRQLIDAG- 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+NITD+DD + ERA ++ S + + F D L+ + P
Sbjct: 75 -HTVHFVQNITDVDDPLFERAERDGVS------WRELGTDQINLFRSDMEALSVIPPRDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
A I ++I ++Q ++ +G AY + +I TS+ ++G S D +
Sbjct: 128 VGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLMEEFFA 187
Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
PE+ KK+P D ++W+ + EP W++P+G GRPGWHIECSA++++ LG F I
Sbjct: 188 ERGGDPERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRLGNNFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + + AN ++H G + L+G KMSKS GN + +++L
Sbjct: 248 GGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVFVSQLTAD 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
IRL + HYR P +++ + L++AE W + + + A
Sbjct: 308 ------GHHPSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDLQAAQNLV 361
Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
L DL+T A+ A+ A+ KN + A +LGI++
Sbjct: 362 ASIRFYLSQDLDTPKALAAVDAWAKAIEKNESSRERAAAGDLVACALDALLGIKI 416
>gi|84496470|ref|ZP_00995324.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
gi|84383238|gb|EAP99119.1| cysteinyl-tRNA synthetase [Janibacter sp. HTCC2649]
Length = 414
Score = 209 bits (533), Expect = 5e-52, Method: Composition-based stats.
Identities = 122/412 (29%), Positives = 198/412 (48%), Gaps = 40/412 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++++T ++ E + R+YVCG T YD H+G+A + FD++ R+LR E
Sbjct: 19 LRLHDTSSGELREVVP---GEVARLYVCGITPYDATHLGHAATYVAFDLVGRVLRDNGHE 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y +N+TD+DD ++ERA+++ + + +D T L + P
Sbjct: 76 --VHYTQNVTDVDDPLLERAKRDGID------WRDLAVAEADLYREDMTALQVIPPQDYI 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANN------EIIFDTSSIPNYGSFSRRKIDEQKMGT 177
+P + L++ I G AYE N ++ D S + +G S ++
Sbjct: 128 GVVEALPVIADLVRRTIESGAAYELPNDEAEGPDLYVDLSHVSGFGKVSGWTREQMLTVF 187
Query: 178 RV----PEKYHKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFD 232
P++ K++ D +LW+ + EP WE GRPGWH+EC+A++ LG D
Sbjct: 188 AERGGDPDRPGKRDVLDPLLWRAARDGEPSWEFEGLPAGRPGWHVECTAIALDRLGVPID 247
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
++GGG DLIFPHHE +AQ+ A ++ A + H G + L+G KMSKS GN + +++L
Sbjct: 248 VNGGGSDLIFPHHEMTVAQA-SAIGVDDYARLHAHAGMVGLDGHKMSKSRGNLVLVSKLR 306
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGII 347
IRL +L HYR D+T + LT A+ L W T+ S
Sbjct: 307 AD------GVDPMAIRLVLLAEHYRSDWDYTPELLTVAQTRLEHWREALSVNTAPSADET 360
Query: 348 DPAVLSALYNDLNTVSAIQALHKLA-RESTKNHDLLP----IFNASAHILGI 394
A+ +AL +DL+ A+ A+ A + + D + A +LGI
Sbjct: 361 VAAIRAALSDDLDAPRALAAIDVWADKTLSTGGDEQAAPGVLGRALDALLGI 412
>gi|281205872|gb|EFA80061.1| cysteinyl-tRNA synthetase [Polysphondylium pallidum PN500]
Length = 837
Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats.
Identities = 128/452 (28%), Positives = 181/452 (40%), Gaps = 68/452 (15%)
Query: 9 NTLERKITEFQAID----PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
N+L + + I Y CGPTVYD AH+G+AR + D++ R+L Y
Sbjct: 63 NSLSHEKKP-VPLVLENSGRTISWYTCGPTVYDSAHLGHARAYVSIDIVQRVLTD-YFNL 120
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ +V +TD+DDKII+ S + + + +F++D L P R
Sbjct: 121 NINHVMGMTDVDDKIIK------MSATKGMSFKELARQKELEFIQDMDSLNVRPPLLITR 174
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDT-SSIPNYGSFSRRKIDEQKMGT 177
+ HIP +I ++ I +G+AY+ + ++FDT YG + Q
Sbjct: 175 VSEHIPNIINFVKQIRENGYAYDVDIPGSTGQSVLFDTGKFGTRYGKLEKENQGAQADEN 234
Query: 178 RVPEKYHKKNPADFILWKRSTPMEP--------GWESPWGRGRPGWHIECSAMSSHYLGK 229
+ K DF LWK + P+ W SP+G GRPGWHIECS+M G
Sbjct: 235 LAIQSDVKLGTRDFALWKSANPITDVDGQGKLVVWNSPFGDGRPGWHIECSSMIHSIFGD 294
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEK---------TANIWIHNGFLNLEGRKMSK 280
D+H GG+DL FPHHENEIAQ N ++H G LN++G KMSK
Sbjct: 295 KLDVHAGGIDLKFPHHENEIAQCEAHFSPHPNPATGEYKQWVNYFMHIGHLNIKGLKMSK 354
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLA-----------MLMTHYREPIDFT---VQR 326
S NFITI E L W R + ID+ R
Sbjct: 355 SLKNFITIREYLAKNTATSFRWLCLTNRYFDTINYNPKSDEQYQNSLQRFIDWFNMVEMR 414
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALY------NDLNTVSAIQALHKLARESTKNHD 380
+ E + +K IID LS +D NT AI+ + L +E+ N+
Sbjct: 415 MMEPININLTRASYQQAKPIIDLFNLSKNDIHLALTDDFNTPKAIKIMQLLVKETMMNNT 474
Query: 381 LLP------------IFNASAHILGIEVCKEH 400
L G E
Sbjct: 475 QLKSIPRDILFNIYCYLRKMFTTFGFEELFSK 506
>gi|300858471|ref|YP_003783454.1| mshC ligase [Corynebacterium pseudotuberculosis FRC41]
gi|300685925|gb|ADK28847.1| MshC ligase [Corynebacterium pseudotuberculosis FRC41]
gi|302330740|gb|ADL20934.1| Cysteinyl-tRNA synthetase [Corynebacterium pseudotuberculosis 1002]
Length = 416
Score = 209 bits (531), Expect = 9e-52, Method: Composition-based stats.
Identities = 124/415 (29%), Positives = 204/415 (49%), Gaps = 40/415 (9%)
Query: 5 IKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +Y+T +R + ++ + +YVCG T YD H+G+A + FD++ R L
Sbjct: 19 LSLYDTADR---VIKPVNCSNGEVGVYVCGITPYDSTHLGHAATYLAFDLINRQLIDAG- 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V +V+NITD+DD + ERA ++ S + + F D L+ + P
Sbjct: 75 -HTVHFVQNITDVDDPLFERAERDGVS------WRELGTDQINLFRSDMEALSVIPPRDY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
A I ++I ++Q ++ +G AY + +I TS+ ++G S D +
Sbjct: 128 VGAMEAIDEVIEMVQALLDNGSAYIVDVDQYRDIYASTSATSHFGYESNYSRDLMEEFFA 187
Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
PE+ KK+P D ++W+ + EP W++P+G GRPGWHIECSA++++ LG F I
Sbjct: 188 ERGGDPERPGKKDPLDALIWRSARKGEPSWDAPFGAGRPGWHIECSAIATNRLGNNFAIQ 247
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A + + AN ++H G + L+G KMSKS GN + +++L
Sbjct: 248 GGGSDLIFPHHEFSAAHAEAAHHVHRMANHYVHAGMIALDGVKMSKSLGNLVFVSQLTAD 307
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
IRL + HYR P +++ + L++AE W + + + A
Sbjct: 308 ------GHHPSAIRLGLYSGHYRSPREWSEKILSDAEKRRELWINAADTATDLQAAQNLV 361
Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNHDLLP-------IFNASAHILGIEV 396
L DL+T A+ A+ A+ KN + A +LG+++
Sbjct: 362 ASIRFYLSQDLDTPKALAAVDAWAKAIEKNESSRERAAAGDLVACALDALLGVKI 416
>gi|254775033|ref|ZP_05216549.1| cysteinyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
25291]
Length = 384
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 120/385 (31%), Positives = 185/385 (48%), Gaps = 31/385 (8%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
MYVCG T YD H+G+A + FD++YR ++ V YV+N+TD+DD ++ERA ++
Sbjct: 12 TMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAARD 69
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + F +D L LAP AT I ++ L++ ++ G AY
Sbjct: 70 GID------WRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAAY 123
Query: 147 EANN---EIIFDTSSIPNYGSFSRRK----IDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ +I + + +G S + P++ K + D +LW+ + P
Sbjct: 124 VVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGDPQRPGKTDALDALLWRAARP 183
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
EP W SP+G GRPGWH+EC+A++ +G DI GGG DLIFPHHE A + C
Sbjct: 184 GEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVRGER 243
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
+ A ++H G + +G KMSKS GN + +++L GR IRL +L HYR
Sbjct: 244 RFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL------RGRGVEPAAIRLGLLAGHYRGD 297
Query: 320 IDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
++ Q L EA L +W + + V L +DLNT A+ AL +
Sbjct: 298 RYWSDQVLDEATARLRRWRTATALPAGPDATDVIARVRQYLADDLNTPKALAALDGWTTD 357
Query: 375 STKN--HDLLP---IFNASAHILGI 394
+ HD + +A +LG+
Sbjct: 358 ALDYGGHDTAAPRLVASAVDALLGV 382
>gi|118465539|ref|YP_881564.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
gi|310947192|sp|A0QF76|MSHC_MYCA1 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|118166826|gb|ABK67723.1| cysteinyl-tRNA synthetase [Mycobacterium avium 104]
Length = 384
Score = 208 bits (530), Expect = 1e-51, Method: Composition-based stats.
Identities = 119/385 (30%), Positives = 184/385 (47%), Gaps = 31/385 (8%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
MYVCG T YD H+G+A + FD++YR ++ V YV+N+TD+DD ++ERA ++
Sbjct: 12 TMYVCGITPYDATHLGHAATYLAFDLIYR--QWLDLGHDVHYVQNVTDVDDPLLERAARD 69
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + F +D L LAP AT I ++ L++ ++ G AY
Sbjct: 70 GID------WRALAEREVSLFREDMAALRILAPRDYVGATEAIADVVELVEKMLASGAAY 123
Query: 147 EANN---EIIFDTSSIPNYGSFSRRK----IDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ +I + + +G S + P++ K + D +LW+ + P
Sbjct: 124 VVDGEFPDIYYRADATLQFGYESGYDRETMLRLFAERGGDPQRPGKTDALDALLWRAARP 183
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
EP W SP+G GRPGWH+EC+A++ +G DI GGG DLIFPHHE A + C
Sbjct: 184 GEPSWPSPFGNGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVRGER 243
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
+ A ++H G + +G KMSKS GN + +++L GR IRL +L H+R
Sbjct: 244 RFARHYVHAGMIGWDGHKMSKSRGNLVLVSQL------RGRGVEPAAIRLGLLAGHFRGD 297
Query: 320 IDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
++ Q L EA L +W + + V L +DLNT A+ AL +
Sbjct: 298 RYWSDQVLDEATARLRRWRTATALPAGPDATDVIARVRQYLADDLNTPKALAALDGWTTD 357
Query: 375 STKN--HDLLP---IFNASAHILGI 394
+ HD + A +LG+
Sbjct: 358 ALDYGGHDTAAPRLVATAVDALLGV 382
>gi|325973156|ref|YP_004250220.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
gi|323651758|gb|ADX97840.1| cysteinyl-tRNA synthetase [Mycoplasma suis str. Illinois]
Length = 435
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 112/462 (24%), Positives = 182/462 (39%), Gaps = 51/462 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++TL R + I +Y+CGPT+Y++ H+GN RP++VFD L R +
Sbjct: 1 MNLWLFDTLSRSKKSIS--EEPVITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII-- 56
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YV+N+TDID+KII +A+ E N + I + + F L + P
Sbjct: 57 NQPYKYVQNLTDIDEKIILKAKHE------NKTVKEIVDQYAESFFNILKNLNIVWPDQL 110
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P + HI + + I +++ G A + ++K
Sbjct: 111 PTVSTHIKNIQFHIDSLLKQGKAVWDKKTQ-----------TIRFLNTGKEKGLNYFSGN 159
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ + F LWK + WESPW G PGWH+EC AM IHGGG+DL F
Sbjct: 160 EVDEEDSCFALWKENNHTSYSWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVDLKF 219
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE A +W+H G + E K+SKS+ + + E E + +
Sbjct: 220 PHHENENLLCRFWHN-HDLAKVWVHVGQVLNEAGKLSKSSNYSLAVEECAEQYSWNFLRY 278
Query: 303 PAPVIRLA--------MLMTHYRE------PIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
+R L +++ E +++ L A+ + + D
Sbjct: 279 IFMKVRYNKPFMINKEALSSYWSEWKSYLTALNYAEITLLNAKHIFFCPEKELRKIEKPD 338
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE 399
++ L NDLN + L L + + S +LG + +
Sbjct: 339 ETIVKHLENDLNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSLEVLGFTLERL 398
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ LL K + AD +R +L KG +
Sbjct: 399 SRENIDEA------ERWFDLLSQKNYEEADKLRLRLTEKGIL 434
>gi|317124881|ref|YP_004098993.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
gi|315588969|gb|ADU48266.1| cysteinyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
Length = 418
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 127/419 (30%), Positives = 199/419 (47%), Gaps = 40/419 (9%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++ +T+ ++ A + +YVCG T YD H+G+A + FD+L R LR
Sbjct: 16 SPEVRVRDTVSGELVP--AAVDGSASVYVCGITPYDATHLGHAATYLTFDLLVRSLRDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+NITDIDD ++ERA ++ S + ++ F +D T LA L P
Sbjct: 74 --VSVRYVQNITDIDDPLLERAERDGVS------WEDLATREIGLFREDMTALAVLPPDE 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY---------EANNEIIFDTSSIPNYGSFSRRK--- 169
A IP I I+ ++ G AY +++ FD S P +GS SR
Sbjct: 126 YLGAVESIPTFIAPIEQLLATGDAYLVPAPDASRPGAHDVYFDISRDPKFGSVSRLDEAG 185
Query: 170 -IDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYL 227
++ P++ K+N D +LW+ EP W+ G GRPGWHIEC+ ++ +L
Sbjct: 186 MLEVFAERGGDPDREGKRNRLDALLWRAHRAGEPEWDGGQLGPGRPGWHIECACIACTHL 245
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
G D+ GGG DL+FPHHE A + A ++H G + L+G KMSKS GN +
Sbjct: 246 GLPIDVQGGGTDLVFPHHEMSAAHARAFSGRPAFARTYVHQGMVGLDGEKMSKSKGNLVF 305
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT-----ST 342
++EL IRLA+L H+ + LT AE L+ W +
Sbjct: 306 VSEL------RRAGVDPMAIRLALLARHHAADWIWQDHDLTAAEERLATWRRALSGNGGP 359
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARES-TKNHDLLP----IFNASAHILGIEV 396
+ V +AL +DL++ A+ ++ + A E+ T+ D L + +LG+ +
Sbjct: 360 AADGTVEEVRAALADDLDSPRALASVDRWAAEALTRGGDDLGAPGLLARTLDALLGVRL 418
>gi|311113625|ref|YP_003984847.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
gi|310945119|gb|ADP41413.1| cysteinyl-tRNA synthetase [Rothia dentocariosa ATCC 17931]
Length = 438
Score = 208 bits (529), Expect = 2e-51, Method: Composition-based stats.
Identities = 109/403 (27%), Positives = 168/403 (41%), Gaps = 53/403 (13%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T + + Q +P + +YVCG T YD H+G+A + FDVL R R
Sbjct: 20 QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRDAG--VT 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYV+N+TD+DD ++ERA + + T+ F D L L P H
Sbjct: 76 VTYVQNVTDVDDPLLERATATGVD------WQELAEEQTELFRTDMEALHVLPPDHYVGV 129
Query: 126 TNHIPQMIYLIQNIILHGHAY------------EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
I + +I++++ AY +I D ++
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPGGDIYLDLKAVQALPQNEDGYSWTP 189
Query: 174 KMGTRVPEKYH---------------KKNPADFILWKRSTPMEPGWES-PWGRGRPGWHI 217
+ + K++P D +LW+ EP W++ G GRPGWHI
Sbjct: 190 GEVSHMSRDEMLDIFSERGGDPERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGWHI 249
Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
EC+ ++ ++ + GG DL FPHH+ S A + H G + L+G K
Sbjct: 250 ECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSNR-PHALHYAHTGMVGLDGHK 308
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS GN + +++L IRLA++ HYRE +T + L +A+ L +
Sbjct: 309 MSKSRGNLVLVSKLRAA------GVDPNTIRLAIMDHHYREDWFWTDEDLKKAQARLDLY 362
Query: 338 PQTSTSKGIID--------PAVLSALYNDLNTVSAIQALHKLA 372
Q S D V L +DL T A+ AL A
Sbjct: 363 RQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405
>gi|149912421|ref|ZP_01900960.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
gi|149804500|gb|EDM64593.1| cysteinyl-tRNA synthetase [Moritella sp. PE36]
Length = 276
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 97/290 (33%), Positives = 138/290 (47%), Gaps = 41/290 (14%)
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W SPWG GRPGWHIECSAM++ LG+VFDIHGGG DL+FPHHENE+AQSCCA
Sbjct: 1 KPGEPRWVSPWGEGRPGWHIECSAMNNKILGEVFDIHGGGSDLMFPHHENEVAQSCCAHN 60
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
E N W+H+G + ++ KMSKS NF TI ++LE + +R ++ HYR
Sbjct: 61 GE-YVNTWMHSGMVQIDKVKMSKSLNNFFTIRDVLE-------KYDGESVRYFLISGHYR 112
Query: 318 EPIDFTVQRLTEAEILLSKWPQT------------STSKGIIDPAVLSALYNDLNTVSAI 365
++++ L +A L + +A+ +D NT A
Sbjct: 113 SQLNYSEDNLKQARASLERLYTALRGVTVAEIDGVVPDCEAYVETFKAAMDDDFNTPEAF 172
Query: 366 QALHKLARESTK--------NHDLLPIFNASAHILGIEVCKEHL-------NKNISIAIE 410
L +LA+E + +L +LG+ + IE
Sbjct: 173 PVLFELAKEINRIKETDEKRAGELAAQLITFGEVLGLLSQDPEAFLQGDTGADDEVAEIE 232
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
L+++R K + AD R +L + G +LED G T W++K
Sbjct: 233 ALIKQRNDARVSKDWGMADDARDKLNALGIVLED------GANGTSWRRK 276
>gi|291301962|ref|YP_003513240.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Stackebrandtia nassauensis DSM 44728]
gi|310947219|sp|D3Q598|MSHC_STANL RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|290571182|gb|ADD44147.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Stackebrandtia nassauensis DSM 44728]
Length = 431
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 120/380 (31%), Positives = 193/380 (50%), Gaps = 27/380 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++Y+T + + + P RMYVCG T YD H+G+A M+ FDV+ R+ R +
Sbjct: 19 LRLYDTARQAVHATEP-HPDGARMYVCGITPYDATHLGHAATMVTFDVINRVWRDNGHD- 76
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TD+D+ + ERA ++ + ++ + T F +D L+ + P
Sbjct: 77 -VAYVQNVTDVDEPLFERAERDG------EDWVVLGMRETALFREDMEALSIIPPKAYVG 129
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRK----IDEQKMGT 177
A +P + L++ ++ G AY + ++ F ++ +GS S +
Sbjct: 130 AVESMPTIAALVERLVDAGAAYTVDDGTGDVYFPVTATEGFGSESHYDRDTMLRFFGERG 189
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
P++ K++P D +LW+ EP WES GRGRPGWHIEC+A++ +LG D++GGG
Sbjct: 190 GDPDRSGKRDPLDALLWRGEREGEPSWESRLGRGRPGWHIECAAIALAHLGDRIDVNGGG 249
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DLIFPHHE A + A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 250 NDLIFPHHEFSAAHAEAATKAVPFAKHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD--- 306
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVL 352
VIRLA+L HYRE +T + A L++W + V
Sbjct: 307 ---GVDPAVIRLALLDGHYREDRPWTAELHAAAADRLARWREAMGMSSGASGTTTAQRVR 363
Query: 353 SALYNDLNTVSAIQALHKLA 372
L +DL+T A++A+ + A
Sbjct: 364 ERLSDDLDTPGALRAVDEWA 383
>gi|83768602|dbj|BAE58739.1| unnamed protein product [Aspergillus oryzae]
Length = 531
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 117/418 (27%), Positives = 184/418 (44%), Gaps = 28/418 (6%)
Query: 17 EFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
F A+DP + Y CGPTVYD AH+G+AR D++ R+L+ Y + V +V NITD
Sbjct: 46 PFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKD-YFKFDVEFVMNITD 104
Query: 75 IDDKIIERARQEHPSIPIN--DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
+DDK+ ++P + + + +T K + F++D L L P R T + ++
Sbjct: 105 VDDKL------RGSTVPGDAYEIFTKLTKKYEEHFMRDMRDLNVLDPDEITRVTEYGQEI 158
Query: 133 IYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
++ I+ + Y + + FD S G R + DF
Sbjct: 159 ADFVEKIVTNDFGYVTLDGSVYFDIKSFEKAGHPYARDGEGTLSHAVEKRSPD-----DF 213
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
+WK S P EP W+S WG+GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 214 AIWKASRPGEPSWKSQWGQGRPGWHIECSAMASSRLGSQNDIHSGGIDLAFPHHDNELAQ 273
Query: 252 SCCAD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
S + ++ N ++H G L+++G KMSKS NF T + + L
Sbjct: 274 SEAYWSEKKQQWVNYFLHMGHLSIQGSKMSKSLKNFATSCGIGWEGTDIPEPAKQFLYPL 333
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
+ + RE + + ++ ++ D + +
Sbjct: 334 SAMRDALREATKSQGEVTHQQLKAITAETIVDERLVSQASRPYFQVFRDFHARISPSNSE 393
Query: 370 KLARESTKNHDLLPIFNASAHI----LGIEVCKEHLNKNISIAI-EKLVQERLI-LLK 421
T + +LL + + + LGI + + + L+Q R K
Sbjct: 394 D---TPTSSKELLSLCDRLRDVELFDLGIYLEDRENKPALVRPVTRDLLQSREEHARK 448
>gi|325989599|ref|YP_004249298.1| Cysteinyl-tRNA synthetase [Mycoplasma suis KI3806]
gi|323574684|emb|CBZ40340.1| Cysteinyl-tRNA synthetase [Mycoplasma suis]
Length = 435
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 112/462 (24%), Positives = 182/462 (39%), Gaps = 51/462 (11%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++TL R + I +Y+CGPT+Y++ H+GN RP++VFD L R +
Sbjct: 1 MNLWLFDTLSRSKKSIS--EEPVITIYLCGPTLYNYLHLGNLRPIVVFDFLIRYFKII-- 56
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YV+N+TDID+KII +A+ E N + I + + F L + P
Sbjct: 57 NQPYKYVQNLTDIDEKIILKAKHE------NKTVKEIVDQYAESFFNILKNLNIVWPDQL 110
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P + HI + + I +++ G A + ++K
Sbjct: 111 PAVSTHIKNIQFHIDSLLKQGKAVWDKKTQ-----------TIRFLNTGKEKGLNYFSGN 159
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ + F LWK + WESPW G PGWH+EC AM IHGGG+DL F
Sbjct: 160 EVDEEDSCFALWKENNHTSYSWESPWFPGIPGWHLECFAMIEDNFSLPITIHGGGVDLKF 219
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHHENE A +W+H G + E K+SKS+ + + E E + +
Sbjct: 220 PHHENENLLCRFWHN-HDLAKVWVHVGQVLNEAGKLSKSSNYSLAVEECAEQYSWNFLRY 278
Query: 303 PAPVIRLA--------MLMTHYRE------PIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
+R L +++ E +++ L A+ + + D
Sbjct: 279 IFMKVRYNKPFMINKEALSSYWSEWKSYLTALNYAEITLLNAKHIFFCPEKELRKIEKPD 338
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE 399
++ L NDLN + L L + + S +LG + +
Sbjct: 339 ETIVKHLENDLNLPELLSWLEDLKKTLLNSIKKSDYDNILFYWKKLLTSLEVLGFTLERL 398
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
+ LL K + AD +R +L KG +
Sbjct: 399 SRENIDEA------ERWFDLLSQKNYEEADKLRLRLTEKGIL 434
>gi|238064513|ref|ZP_04609222.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
gi|237886324|gb|EEP75152.1| cysteinyl-tRNA synthetase [Micromonospora sp. ATCC 39149]
Length = 412
Score = 208 bits (528), Expect = 2e-51, Method: Composition-based stats.
Identities = 118/411 (28%), Positives = 190/411 (46%), Gaps = 36/411 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++++ R P ++ MYVCG T YD H+G+A MI FD++ R+ R
Sbjct: 19 LTLFDSARRGT---HPSRPGDVATMYVCGITPYDATHLGHAATMITFDLVQRMWRDAG-- 73
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H
Sbjct: 74 LTVRYVQNVTDIDDPLLERAARDG------EDWKVLAMRETALFREDMEALRMIPPAHYV 127
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
A IP + + ++ G AY + ++ FD ++ P +G S E
Sbjct: 128 GAVESIPDIADKVLVLLKDGAAYRLDDGTGDVYFDIAATPEFGYESNLSRAEMLEIFPER 187
Query: 181 EKY----HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K++P D +LW+ + EP W G GRPGWHIEC+ ++ + LG+ D+ G
Sbjct: 188 GGDPERAGKRDPLDPLLWRGAREGEPSWPGGDLGPGRPGWHIECAVIALNLLGESIDVQG 247
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL+FPHHE A + A ++H G + L G KMSKS GN + ++ L
Sbjct: 248 GGNDLLFPHHECSAAHAERLTGRSPFATHYVHAGMIGLNGEKMSKSRGNLVFVSRLRAD- 306
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPA 350
+RL ++ HYR +T LT A+ L++W + + + + A
Sbjct: 307 -----RVDPMAVRLGLMAGHYRADRTWTEDLLTVAQERLARWRRAAAAPAGPSGVELMSA 361
Query: 351 VLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIF-NASAHILGIEV 396
V + L +DL+T AI A + +F + +LGI +
Sbjct: 362 VRARLADDLDTPGAIAVADDWAERVLAGTGDDRSAPSLFADTLDALLGIRL 412
>gi|317506755|ref|ZP_07964536.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Segniliparus rugosus ATCC BAA-974]
gi|316254954|gb|EFV14243.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Segniliparus rugosus ATCC BAA-974]
Length = 354
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 104/355 (29%), Positives = 167/355 (47%), Gaps = 35/355 (9%)
Query: 3 KKIKIYNTLERKITEFQAIDPS-NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++++ +R + + P MYVCG T YD H+G+A + FD++ RL
Sbjct: 17 PQLRLWDSADR---LLRPVAPGRKAGMYVCGITPYDATHLGHAATYLAFDLVCRLWLDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V Y +NITD+DD ++ERA ++ + + ++ + F D L L P
Sbjct: 74 HE--VHYTQNITDVDDPLLERAERD------DRDWRALAAEQIELFRTDMAALRVLPPQD 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR--------KIDEQ 173
T I ++ +++ ++ + AY D
Sbjct: 126 YVGVTESIDLVVAMVEKLLANQSAYVVAEGEYPDVYHRVGATEDFGYVSGYDRDEMTRVF 185
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ P++ K +P D +LW+ + P EP W SP+G GRPGWH+ECSA++ +G FD+
Sbjct: 186 RERGGDPDRPGKADPLDALLWRAARPGEPSWPSPFGPGRPGWHVECSAIALDRIGFGFDV 245
Query: 234 HGGGLDLIFPHHENEIAQSCC---------ADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
GGG DL+FPHHE A + AD + A ++H G + L+G KMSKS GN
Sbjct: 246 QGGGADLVFPHHEFSAAHAQAQVGGCSVPGADGRGRFARNYVHAGMIGLDGEKMSKSLGN 305
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
+ +++L IRLA+ HYR + L +A+ LS+W Q
Sbjct: 306 LVFVSKLRAA------GVDPSAIRLALFAGHYRADRSWDQNLLAQAQARLSRWRQ 354
>gi|284991120|ref|YP_003409674.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Geodermatophilus obscurus DSM 43160]
gi|310947184|sp|D2S6C9|MSHC_GEOOG RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|284064365|gb|ADB75303.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Geodermatophilus obscurus DSM 43160]
Length = 422
Score = 207 bits (527), Expect = 3e-51, Method: Composition-based stats.
Identities = 119/415 (28%), Positives = 191/415 (46%), Gaps = 41/415 (9%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T ++ + RMYVCG T YD H+G+A + FD++ R+ R
Sbjct: 19 LTLHDTARGEVVPTTP--DTTARMYVCGITPYDATHLGHAATYLAFDLVNRVWRDAG--H 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TDIDD ++ERA ++ + ++ + T F +D T L L P
Sbjct: 75 AVHYVQNVTDIDDPLLERAERDG------EDWVVLGMRETALFREDMTALRVLPPDDYVG 128
Query: 125 ATNHIPQMIYLIQNIILHGHAY---EANNEIIFDTSSIPNYGSFSRRK----IDEQKMGT 177
A +P+++ ++ ++ G AY + ++ D + P +GS S +
Sbjct: 129 AVESVPRIVAHVETLLDEGLAYVLDDGTGDVYHDIAQAPGFGSESGYDEATMLRFSAERG 188
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGR-GRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ K+N D +LW+ P EP W P G GRPGWHIEC+ ++ +G FD+ GG
Sbjct: 189 GDPDRPGKRNRLDPMLWRGRRPGEPSWPGPRGVAGRPGWHIECATIALETIGMGFDVQGG 248
Query: 237 GLDLIFPHHENEIAQSCCADRIE-----KTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
G DL+FPHHE + A ++H + L+G KMSKS GN + +
Sbjct: 249 GSDLVFPHHEFSAVHAEALTATVTGEKLPFARAYVHAAMIGLDGEKMSKSRGNLVFV--- 305
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GI 346
K G IRLA+L HYR +T L AE L+ W + T
Sbjct: 306 ---SKLRGEGVDPMAIRLALLAGHYRTDRAWTPDLLAGAEQRLATWRRAVTRDAGAPAAE 362
Query: 347 IDPAVLSALYNDLNTVSAIQALHK-----LARESTKNHDLLPIF--NASAHILGI 394
+ + L +DL++ AI + LA + + + P +A +LG+
Sbjct: 363 VLQGLRERLADDLDSPGAIALVDAWAERTLAATADEQEEGAPTIVCDAVDALLGV 417
>gi|156603446|ref|XP_001618835.1| hypothetical protein NEMVEDRAFT_v1g224771 [Nematostella vectensis]
gi|156200573|gb|EDO26735.1| predicted protein [Nematostella vectensis]
Length = 475
Score = 207 bits (526), Expect = 3e-51, Method: Composition-based stats.
Identities = 71/175 (40%), Positives = 105/175 (60%), Gaps = 10/175 (5%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M + IYNTL + F+ +D + +RMYVCG TVYD+ HIG+ R M+ FD++ R LR+
Sbjct: 1 MPM-LSIYNTLTKSKEAFKPLDGNKVRMYVCGMTVYDYCHIGHGRSMVAFDLVTRWLRFS 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ TYVRNITDI+DKII RAR+ + ++T + +D RL L P
Sbjct: 60 GYDL--TYVRNITDIEDKIINRARENG------EPFDVLTERMIAAMHEDEARLNILKPD 111
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQK 174
+PRAT+HIP M+ +IQ +I G+AY N ++ + + YG SR+KI++ +
Sbjct: 112 MEPRATDHIPGMLSMIQTLIDKGYAYAPGNGDVYYRVAKFMGYGKLSRKKIEDLR 166
>gi|302527180|ref|ZP_07279522.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. AA4]
gi|302436075|gb|EFL07891.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces sp. AA4]
Length = 412
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 122/410 (29%), Positives = 189/410 (46%), Gaps = 34/410 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++++T ++ + RMYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 RPLRLHDTATGQVRPTAP--GAAARMYVCGITPYDATHLGHAATYLAFDLVNRIWRDNGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N+TDID+ ++ERA ++ D ++ + T F +D L L P
Sbjct: 75 E--VHYVQNVTDIDEPLLERAERDS------DDWIVLGMRETALFREDMEALRVLPPRQF 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
A IP+++ +I ++ G AY A++ D N +
Sbjct: 127 VGAVEAIPEIVEVIAKLLADGSAYRADDAEFPDVYFDHNATGRFGYESSYDAETMAKFFA 186
Query: 183 YH--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ + EP WES G GRPGWHIECSA++ + LG FD+
Sbjct: 187 ERGGDPDRPGKRHPLDALLWRVAREGEPSWESELGAGRPGWHIECSAIAVNRLGLGFDVQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 247 GGGSDLIFPHHEYSAAHAEAVAADHPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD 306
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-----QTSTSKGIIDP 349
IRLA+ HYRE +T Q L +A+ L++W
Sbjct: 307 ------GVDPAAIRLALFAGHYREDRAWTDQLLVDAQERLARWREAVALPAGPDAEDTVA 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFN-ASAHILGI 394
+ L +DLNT A+ A+ + + + + A +LGI
Sbjct: 361 RLRDHLSDDLNTPKALTAIDAWVTSALRRDGTDQAAPGLIKEAVDALLGI 410
>gi|300786807|ref|YP_003767098.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|299796321|gb|ADJ46696.1| cysteinyl-tRNA synthetase [Amycolatopsis mediterranei U32]
Length = 412
Score = 207 bits (526), Expect = 4e-51, Method: Composition-based stats.
Identities = 124/410 (30%), Positives = 203/410 (49%), Gaps = 34/410 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +++++T +I + RMYVCG T YD H+G+A + FD++ R+ R
Sbjct: 17 RPLRLHDTATGQIRPTAP--GATARMYVCGITPYDATHLGHAATYLAFDLVNRIWRDNGH 74
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TDID+ ++ERA ++ ++ + T F +D T L + P
Sbjct: 75 D--VHYVQNVTDIDEPLLERAARDQGD------WVVLGMRETALFREDMTALRVIPPRQF 126
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
A IP+++ +I ++ +G AY A + +I FD ++ +G S +
Sbjct: 127 VGAVESIPEIVEVIAKLLANGSAYRAGDPEFPDIYFDHTATGRFGYESNYDAETMAKFFA 186
Query: 179 VPEKY----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
K++P D +LW+ + EP WES G GRPGWHIECSA++ + LG FD+
Sbjct: 187 ERGGDPGRAGKRHPLDALLWRVAREGEPSWESELGPGRPGWHIECSAIAVNRLGLGFDLQ 246
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHE A + + + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 247 GGGSDLIFPHHEYSAAHAEAVAKDGRFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD 306
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDP 349
IRLA+ HYR+ +T + LT+AE L++W + +
Sbjct: 307 ------QVDPGAIRLALFAGHYRDDRPWTDRLLTDAETRLARWREAVALATGPAAEDTVT 360
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTK----NHDLLPIFN-ASAHILGI 394
+ L ++L+T A+ A+ A E+ + + + A +LGI
Sbjct: 361 RLRDHLSDNLDTPKALAAIDAWANEALRRDGTDPTAPGLIRDAVDALLGI 410
>gi|300741532|ref|ZP_07071553.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rothia dentocariosa M567]
gi|300380717|gb|EFJ77279.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rothia dentocariosa M567]
Length = 438
Score = 206 bits (525), Expect = 4e-51, Method: Composition-based stats.
Identities = 108/403 (26%), Positives = 168/403 (41%), Gaps = 53/403 (13%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T + + Q +P + +YVCG T YD H+G+A + FDVL R R
Sbjct: 20 QIFDTSTGTVVQLQ--EPQHAGLYVCGITPYDATHMGHASTYVAFDVLNRAWRDAG--VN 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYV+N+TD+DD ++ERA + + T+ F D L L P H
Sbjct: 76 VTYVQNVTDVDDPLLERATATGVD------WQELAEEQTELFRTDMEALHVLPPEHYVGV 129
Query: 126 TNHIPQMIYLIQNIILHGHAY------------EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
I + +I++++ AY + +I D ++
Sbjct: 130 VESIQWLFPVIEDLVERSLAYRVAGYVDEKGVQHPDGDIYLDLKAVQALPQNEDGYSWTP 189
Query: 174 KMGTRVPEKYH---------------KKNPADFILWKRSTPMEPGWES-PWGRGRPGWHI 217
+ + K++P D +LW+ EP W++ G GRPGWHI
Sbjct: 190 GEVSHMSRDEMLDIFSERGGDPERSGKRDPLDPLLWRIKREGEPSWDAGSLGEGRPGWHI 249
Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
EC+ ++ ++ + GG DL FPHH+ S A + H G + L+G K
Sbjct: 250 ECTMIARKFIDGPLTVQAGGSDLKFPHHDLGAGHSWAVSNR-PHALHYAHTGMVGLDGHK 308
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS GN + +++L IRL ++ HYRE +T + L +A+ L +
Sbjct: 309 MSKSRGNLVLVSKLRAA------GVDPNTIRLTIMDHHYREDWFWTDEDLKKAQARLDLY 362
Query: 338 PQTSTSKGIID--------PAVLSALYNDLNTVSAIQALHKLA 372
Q S D V L +DL T A+ AL A
Sbjct: 363 RQAVESANGTDSSAAEQALEKVREYLADDLKTSGALMALDAWA 405
>gi|311742513|ref|ZP_07716322.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
gi|311314141|gb|EFQ84049.1| cysteine--tRNA ligase [Aeromicrobium marinum DSM 15272]
Length = 412
Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats.
Identities = 106/341 (31%), Positives = 168/341 (49%), Gaps = 21/341 (6%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++++ S+ R+YVCG T YD H+G+A + FD+L R R +
Sbjct: 24 RVHDSASGSRVTVDP--DSHARLYVCGITPYDATHLGHAATYLAFDLLQRAWRDRGLD-- 79
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTY +N+TD+DD ++ERA + T+ F +D T L ++P H A
Sbjct: 80 VTYTQNVTDVDDPLLERATATGVD------WVTLAEAQTELFRQDMTALRIISPDHYVGA 133
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PE 181
I ++ L+ + G Y ++++ FD + +GS S + P+
Sbjct: 134 VESIDLVVDLVDRLTGAGATYRVDDDLYFDVHADAGFGSVSGLDEAAMRAVFAERGGDPD 193
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ K++P D +LW+ P EP W++ GRGRPGWHIEC+A++ +LG FD+ GGG DL+
Sbjct: 194 RPGKRHPLDCLLWQAERPGEPAWDTRLGRGRPGWHIECAAIALEHLGTTFDVQGGGSDLL 253
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE +++ A + A ++H G + +G KMSKS GN + ++ L
Sbjct: 254 FPHHEMSASEAAVATGL-PFAGAFVHTGMVGYQGEKMSKSKGNLVLVSRLRAD------G 306
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
IRLA+L HYR ++ + AE L W
Sbjct: 307 HDPMAIRLALLAHHYRTDWEWHDDEIVVAEQRLGAWRSAVH 347
>gi|330805180|ref|XP_003290564.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
gi|325079310|gb|EGC32916.1| hypothetical protein DICPUDRAFT_155084 [Dictyostelium purpureum]
Length = 591
Score = 206 bits (525), Expect = 5e-51, Method: Composition-based stats.
Identities = 133/500 (26%), Positives = 214/500 (42%), Gaps = 90/500 (18%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
I Y CGPTVY +HIG+AR + D++ R+L+ Y + +V +TDIDDKI+ ++R+
Sbjct: 82 ISWYTCGPTVYSSSHIGHARNYVTVDIIQRILQD-YFRLNIIHVMGMTDIDDKILIKSRE 140
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ S S ++ ++F++D L P R + H+ ++I I+ I +
Sbjct: 141 KQISA------SELSRIYEKEFIEDLKSLNIKPPMFTTRVSEHMGEIINYIEKIRDNNLT 194
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS-------- 197
YE+ I F+ + R I+E + KK+ DF+LWK
Sbjct: 195 YESTKSIFFNVEKFGFDRYSTLRAINEHGESKDL-VDDTKKSNQDFVLWKSFNKDLDYDG 253
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD- 256
GWESP+G+GRPGWHIECSAM + G D+H GG+DL FPHH+NEIAQ
Sbjct: 254 KNEAVGWESPFGKGRPGWHIECSAMINSIFGNHLDVHSGGIDLEFPHHQNEIAQCEGHHS 313
Query: 257 -----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
+ AN ++H G L+L+ KMSKS N ITI + L+ + +R
Sbjct: 314 ECNKDGSYQWANYFLHVGHLHLKNVKMSKSLNNVITIRDFLD-------KYTPNTLRWLC 366
Query: 312 LMTHYREPIDFTVQRLT---EAEILLSKWPQTSTSK------------------------ 344
L+ Y +P+ ++ + L E E+L W + +K
Sbjct: 367 LIHRYTDPLVYSDETLKLCVEKELLFINWFKFVQNKLDEELVSVDKVKKTFNDSAALLEQ 426
Query: 345 -GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---------FNASAHILGI 394
V L ND +T + +++L L +++ ++ D + + ++ G+
Sbjct: 427 LSNTKLKVEKDLANDFDTPAVVESLQSLMKQTRESIDTIDTDLLYNIQDYIKSILNVFGL 486
Query: 395 EVCKEHL------NKNISIAIEKLVQERLILL-----------------KMKKFSSADYI 431
+V + +E L+ R L K K + D +
Sbjct: 487 DVSNLSNLPTNVGDNTNEFLLETLMDLRSDLKKLLKDVPNSQDPSFKEIKSKLYKITDQV 546
Query: 432 RKQ-LESKGFILEDYKNPDN 450
R + L + D N D
Sbjct: 547 RDKCLSEINLKVSDNANNDK 566
>gi|224031007|gb|ACN34579.1| unknown [Zea mays]
Length = 400
Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats.
Identities = 139/399 (34%), Positives = 202/399 (50%), Gaps = 65/399 (16%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L CL P+ +PR ++H+ ++I +I+ I+ + AY ++ F + P YG S RK+
Sbjct: 1 MANLQCLPPSVEPRVSDHVDEIINMIKQILDNRCAYVVGGDVYFSVDNFPEYGELSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
D+ + G RV K+NPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG
Sbjct: 61 DDNRAGERVAVDERKRNPADFALWKAAKDGEPWWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG DLIFPHHENEIAQS A + T N WIHNGF+N+ +KMSKS GNF+TI +
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAAC-CDSTINYWIHNGFVNVNSQKMSKSLGNFVTIRK 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
++E + +R+ +L THYR PI++T+++L A L QT I
Sbjct: 180 VIEM-------YHPLALRMFLLGTHYRSPINYTIEQLNVASDRLYYTYQTLRDCEEICQH 232
Query: 351 VLSA-----------------------LYNDLNTVSAIQALHKLAREST----------- 376
S + +DL+T A+ A+ + +
Sbjct: 233 QQSNTGNPLPANTLNYIQKLHDEFETSMSDDLHTSVALAAMSEPLKVMNDLLHTRKGKKQ 292
Query: 377 -KNHDLLPIFNA----SAHILGI------EVCKEHLNKNI------SIAIEKLVQERLIL 419
K + L +LG+ E ++ +K + + + ++ER
Sbjct: 293 DKRLESLSALEEKIRVVLSVLGLLPSSYHEALQQLRDKALRRASITEELVVQKIEERTAA 352
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K K++ +D IRK+L + G L D + T W+
Sbjct: 353 RKAKQYEKSDEIRKELAAVGIALMDGPD------GTTWR 385
>gi|296129854|ref|YP_003637104.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Cellulomonas flavigena DSM 20109]
gi|310947177|sp|D5UFA8|MSHC_CELFN RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|296021669|gb|ADG74905.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Cellulomonas flavigena DSM 20109]
Length = 415
Score = 206 bits (524), Expect = 6e-51, Method: Composition-based stats.
Identities = 114/426 (26%), Positives = 193/426 (45%), Gaps = 46/426 (10%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++ +T ++ A + R+YVCG T YD H+G+A + FDVL R K
Sbjct: 20 RVLDTATGRLV--VAATGPHARLYVCGITPYDATHLGHASTYVAFDVLVRAWLDEG--KT 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTY N+TD+DD ++ERA + ++ T + D T L + P
Sbjct: 76 VTYASNVTDVDDPLLERATATGVD------WRDLAAQQTALYASDMTTLGVVPPDVYRGV 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN-----NEIIFDTSSIPNYGSFSRRKIDEQKM----G 176
+PQ++ + ++ AY +++ D S+ P +GS + +
Sbjct: 130 VESVPQVVAAVDALLSRDAAYRLPAPDGGDDVYADLSADPGFGSVAGLEHAAMLALSAER 189
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHG 235
P++ K++P D +LW+ P EP W++P GRGRPGWH+EC+ ++S LG FD+ G
Sbjct: 190 GGDPDRPGKRSPLDPLLWRAERPGEPAWDAPGLGRGRPGWHVECAVIASDGLGVPFDVQG 249
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE+ + + A +H G + G KMSKS GN + +++L+
Sbjct: 250 GGSDLAFPHHESSASHLRVLTGTPQPAAAHVHTGMVGYRGHKMSKSLGNLVLVSQLVAD- 308
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-----IIDPA 350
+RLA+L YR ++T L A+ +++W + + G +
Sbjct: 309 -----GVEPMAVRLAVLAHRYRSDWEWTDDVLATAQQRVARWRRALSGNGGPAAQPVLDG 363
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
V +A+ +DL+T A+ + A + G +E ++ ++
Sbjct: 364 VRAAVADDLDTPRALAVVDAWATAALA---------------GEVPFEEGAPGVVARTVD 408
Query: 411 KLVQER 416
L+ R
Sbjct: 409 ALLGVR 414
>gi|256394535|ref|YP_003116099.1| cysteinyl-tRNA synthetase [Catenulispora acidiphila DSM 44928]
gi|310947176|sp|C7Q9B2|MSHC_CATAD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|256360761|gb|ACU74258.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Catenulispora acidiphila DSM 44928]
Length = 427
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 112/384 (29%), Positives = 180/384 (46%), Gaps = 31/384 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++T + + A P R+YVCG T YD H+G+A + FD++ R
Sbjct: 20 RLHDTAAQGLVPTPAAAPGEAARIYVCGITPYDATHMGHANTYLTFDLIQRAWLDAG--H 77
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V+YV+N+TD+DD ++ERA + T F +D T L L P H
Sbjct: 78 PVSYVQNVTDVDDPLLERAAATGRD------WEALAESETALFREDMTALRILPPQHYVG 131
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----P 180
A IP ++ L+ ++ G AY+ + ++ F + P +G+ + E P
Sbjct: 132 AVESIPLVVDLVVKLLERGAAYDVDGDVYFSVHADPAFGAVAHLDAPEMLTTFGERGGDP 191
Query: 181 EKYHKKNPADFILWKRSTPMEPGWE-------SPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+ KK+P D +LW+ EP WE + GRPGWHIEC+A++ +LG D+
Sbjct: 192 GRPGKKDPLDCLLWQAEREGEPSWEPGEQARAAGLKPGRPGWHIECAAIALEHLGMGIDL 251
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GGG DL FPHHE +++ A+ ++H+G + L+G KMSKS GN + +++L
Sbjct: 252 QGGGSDLAFPHHEMGASEAQVVTGQRPYAHSYVHSGMVGLDGEKMSKSKGNLVLVSKLRH 311
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIID 348
IRLA+L HYR ++T L A L++W +
Sbjct: 312 A------GVDPMAIRLALLAHHYRTDWEWTDADLVSAVARLARWRAAVSRPDGVPADDVL 365
Query: 349 PAVLSALYNDLNTVSAIQALHKLA 372
AV + + +DL+ A+ +
Sbjct: 366 DAVRARIADDLDAPGALAVIDAWV 389
>gi|253742420|gb|EES99254.1| Cysteinyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
Length = 644
Score = 206 bits (523), Expect = 8e-51, Method: Composition-based stats.
Identities = 124/426 (29%), Positives = 187/426 (43%), Gaps = 52/426 (12%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
I N+L ++ E + PS + Y+CGPTVYD H+G+AR + FD+ R+L Y +
Sbjct: 10 ITNSLTGRLEELRTRAPSTVLAYICGPTVYDSTHLGHARTYVTFDIARRILED-YFGLRI 68
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y NITD+DDKII RA + S I I K +F+ D L+ T R T
Sbjct: 69 HYQCNITDVDDKIIARAIERGSS------IFDICRKYEHEFLSDMRALSVRPFTVLTRVT 122
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR-------------KIDEQ 173
++ +I IQ II +G AY + + FD + N G + I
Sbjct: 123 EYMADIILFIQKIIDNGFAYVSAGSVYFDVVAARNAGYVYPKLRPLGSSSDELQLLIQNV 182
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEP---GWESPWGR------------GRPGWHIE 218
K++ +DF LWK EP W + + GRPGWHIE
Sbjct: 183 DGIDSKNRVAEKRSSSDFALWKAWKETEPEDAKWNATFSYKDGDKLEQITLPGRPGWHIE 242
Query: 219 CSAMSSHYLGKV----FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLE 274
CSAM++ LGK FD+H GG DL FPHH+NE+ Q R ++ ++H+G L +
Sbjct: 243 CSAMAAAVLGKSTEGAFDLHLGGCDLQFPHHDNELIQLETWARNKEMIGYFMHSGHLKIA 302
Query: 275 GRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
G MSKS NF T+ E+L + A +R+ M Y +D+++ + A
Sbjct: 303 GDVMSKSKKNFRTVREILSI-------FTANQVRMLFCMVPYNASLDYSISMMDAAVAKD 355
Query: 335 SKW------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
K + + + Y+ A Q++ L+ + + I +
Sbjct: 356 KKITSFLANCHQIIHADELSRPLENLRYDASEEALAAQSMEFLSNIDAAFRNDINIVSVM 415
Query: 389 AHILGI 394
HI+ +
Sbjct: 416 NHIISL 421
>gi|330939693|gb|EGH42992.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 187
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 9/194 (4%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ IYNTL + F+ +D + +RMYVCG TVYD+ H+G+ R M+ FD++ R LR+ E
Sbjct: 1 MLSIYNTLTKSKEVFKPLDGNKVRMYVCGMTVYDYCHLGHGRSMVAFDLVTRWLRFSGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITDIDDKII RAR+ ++ +T++ + +D RL L P +P
Sbjct: 61 L--TYVRNITDIDDKIINRARENG------ESFDALTARMIEAMHEDEARLNILKPDMEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RAT+HIP M +IQ +I G+AY N ++ + YG SR+KI++ ++G R+
Sbjct: 113 RATDHIPGMHAMIQTLIDKGYAYAPGNGDVYYRVGKFQGYGKLSRKKIEDLRIGARIEVD 172
Query: 183 YHKKNPADFILWKR 196
K++P DF+LWK
Sbjct: 173 ESKEDPLDFVLWKG 186
>gi|309813142|ref|ZP_07706866.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Dermacoccus sp. Ellin185]
gi|308432946|gb|EFP56854.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Dermacoccus sp. Ellin185]
Length = 420
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 112/417 (26%), Positives = 186/417 (44%), Gaps = 41/417 (9%)
Query: 4 KIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++T +I ID +YVCG T YD H+G+A + FD+ R++
Sbjct: 21 DVRLFDTAAGEI---VPIDLGEQAGLYVCGITPYDATHLGHAATYVTFDIAQRVMIDAG- 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
VTYV+N+TD+DD ++ERA ++ + + + F D L + P H
Sbjct: 77 -AQVTYVQNVTDVDDPLLERAARDGVD------WRELATSEIELFHGDMEALGVIPPQHY 129
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEAN-----------NEIIFDTSSIPNYGSFSRRKID 171
+ + ++ G AY + ++ D + P +GS S +
Sbjct: 130 VGVVESMTLHSTNVARLLERGLAYTVDVPAAENAAAGAKDVYLDLAQQPTFGSVSHWDRE 189
Query: 172 EQKMGTR----VPEKYHKKNPADFILWKRSTPMEPGWE--SPWGRGRPGWHIECSAMSSH 225
+ PE+ K++ D +LW+ EP W+ GRGRPGWHIEC++++
Sbjct: 190 QMMAVFADRGGDPEREGKRDVFDPLLWRAEREGEPAWDGGPGVGRGRPGWHIECTSIALE 249
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+LG F + GGG DLIFPHHE Q+ A+ + H G + +G KMSKS GN
Sbjct: 250 HLGNGFTLQGGGTDLIFPHHEMSAVQANALTGQPPFAHHYAHQGMVGYDGEKMSKSKGN- 308
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
L++ IRL +L HYR ++T L A+ L+ W + + G
Sbjct: 309 -----LVKVSVLRREGVDPMAIRLVLLDQHYRTDWEYTDALLDAAKERLATWRRAIEADG 363
Query: 346 IIDPAVLSALYN----DLNTVSAIQALHKL-ARESTKNHDLLPIFNA-SAHILGIEV 396
+ + A+ DL+T +A+ A+ A E + + +LG+++
Sbjct: 364 VDATPTIEAVRRALRSDLDTPAALAAIDAWCAAEGEEAVGSAQQIHDVVDALLGVKL 420
>gi|215697564|dbj|BAG91558.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 399
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 137/402 (34%), Positives = 200/402 (49%), Gaps = 71/402 (17%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L CL P+ +PR ++HI Q+I +I+ II + AY ++ F + P YG S RK+
Sbjct: 1 MANLHCLPPSVEPRVSDHIDQIINMIKQIIDNDCAYAIGGDVYFSVENFPEYGDLSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
D+ + G RV KKNPADF LWK + EP W+SPWG GRPGWHIECSAMS+HYLG
Sbjct: 61 DDNRAGERVAVDERKKNPADFALWKAAKDGEPSWDSPWGPGRPGWHIECSAMSAHYLGHS 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG DLIFPHHENEIAQS A + + N WIHNGF+N+ +KMSKS GNF+TI +
Sbjct: 121 FDIHGGGEDLIFPHHENEIAQSRAAC-CDSSINYWIHNGFVNVNSQKMSKSLGNFVTIRK 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
+ E + +R+ +L THYR PI++T++ + + + T + + +
Sbjct: 180 VTEL-------YHPLALRMFLLGTHYRSPINYTIE---QLNVASDRLYYTYQTLQDCEES 229
Query: 351 VLSA--------------------------LYNDLNTVSAIQALHKLAREST-------- 376
+ +DL+T A+ A+ + +
Sbjct: 230 CQQHQSKAGDPLPVNTTNCIQKLHDEFETSMSDDLHTSVALAAISEPLKVMNDLLHTRKG 289
Query: 377 -KNHDLLPIFNAS-------AHILGI------EVCKEHLNKNI------SIAIEKLVQER 416
K L +A +LG+ E ++ K + + + ++ER
Sbjct: 290 KKQEKRLESLSAMEEKIRMVLSVLGLLPSSYYEALQQLREKALRRASMTEEQVLQKIEER 349
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K K++ +D IRK+L + G L D + T W+
Sbjct: 350 TSARKAKQYEKSDEIRKELAAVGIALMDGPD------GTTWR 385
>gi|297626576|ref|YP_003688339.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
gi|296922341|emb|CBL56913.1| Cysteine--tRNA ligase [Propionibacterium freudenreichii subsp.
shermanii CIRM-BIA1]
Length = 418
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 122/410 (29%), Positives = 188/410 (45%), Gaps = 38/410 (9%)
Query: 19 QAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
I P + +YVCG T YD H+G+A ++FDVL R+ R V Y +N+TD+D
Sbjct: 36 VPIGPADGDAGLYVCGITPYDATHMGHAFTYVMFDVLDRVWRDLG--LNVRYAQNVTDVD 93
Query: 77 DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
D ++ERAR + S TQ F D L L P AT+ I +++ LI
Sbjct: 94 DPLLERARATGVD------WRELASDQTQLFRDDMESLRVLPPRWYVPATSIIDEVVELI 147
Query: 137 QNIILHGHAYEANN----EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP----EKYHKKNP 188
+ + G Y+ ++ + F+ P +G+ S + E+ K++
Sbjct: 148 ERLRQQGTIYQVDDPQYPDWYFEVGKAPGFGTESHLSRQDMISEFAEHGGDPERPGKRDA 207
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
D ++W+ P EP W+S GRGRPGWHIEC+A + + LG+ F + GGG DL FPHHE
Sbjct: 208 LDCLVWRMERPGEPAWDSRLGRGRPGWHIECTATALNRLGEDFAVQGGGRDLAFPHHEMC 267
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
A++ A + A +IH G + L+G KMSKS GN + + K + IR
Sbjct: 268 AAEAIVATG-KPFAEAYIHVGMVGLDGEKMSKSLGNLVLV------SKLRAQGVDPMAIR 320
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
LA+L Y +T L +A+ L W + + D + I +
Sbjct: 321 LALLAHGYASDWSWTQAGLDDAQRRLDAWRAATRASSGTDAVPV------------IADI 368
Query: 369 HKLARESTKNHDLLPIFNA-SAHILGIEVCKEHLNKNISIAIEKLVQERL 417
+ RE L + + S+ +L + + IS A++ L+ RL
Sbjct: 369 RRALREGLDTPTALAVVDEWSSAVLAGDGDDLAAPQQISQAVDALLGIRL 418
>gi|302546650|ref|ZP_07298992.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces hygroscopicus ATCC 53653]
gi|302464268|gb|EFL27361.1| cysteine-1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Streptomyces himastatinicus ATCC 53653]
Length = 373
Score = 205 bits (522), Expect = 1e-50, Method: Composition-based stats.
Identities = 113/329 (34%), Positives = 165/329 (50%), Gaps = 23/329 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + P + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLRIHDTATGGP---ITLTPGPVARIYVCGITPYDATHMGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TDIDD ++ERA D + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDIDDPLLERAVANG------DDWTALAERETALFREDMTALRMLPPRH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP ++ L++ + G AYE +I F S P +GS SR + +
Sbjct: 126 YIGAVESIPGIVPLVERLRDAGAAYEVEGDIYFSVESDPAFGSVSRLDAEAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ G GRPGWHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWVAAREGEPSWDGGSLGPGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLAFPHHEMGASHAQVLTGERPFAQSYVHAGMVGLNGEKMSKSKGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
IRLA+L HYR ++T
Sbjct: 301 -RRDGVDPAAIRLALLAHHYRSDWEWTDG 328
>gi|289705192|ref|ZP_06501594.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Micrococcus luteus SK58]
gi|289558082|gb|EFD51371.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Micrococcus luteus SK58]
Length = 422
Score = 205 bits (521), Expect = 1e-50, Method: Composition-based stats.
Identities = 120/424 (28%), Positives = 193/424 (45%), Gaps = 51/424 (12%)
Query: 4 KIKIYNTLERKITEFQAIDPS----NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
++++++T + P +YVCG T YD H+G+A + FD+L+R R
Sbjct: 18 RLRLHDTATGRTR-----HPGNDAQRASLYVCGITPYDATHLGHASTYVAFDLLHRYWRA 72
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP 119
E V YV+N+TD+DD ++ERA + + T F D L LAP
Sbjct: 73 AGLE--VAYVQNVTDVDDPLLERAEATGVD------WRALAEEQTDLFRADMAALEVLAP 124
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYG-----SFSR 167
H AT + ++ ++ ++ G AY + ++ FD + + S
Sbjct: 125 GHYVGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPDGDVYFDVRAAQSATDWRLGQVSA 184
Query: 168 RKIDEQKMGTRV----PEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAM 222
+DE P++ K++P D +LW+ EP W+ G GRPGWHIECS +
Sbjct: 185 MGLDEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECSVI 244
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
S +L F + GGG DL FPHHE A + D + A+ + H G + L+G KMSKS
Sbjct: 245 SRAHLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSKSL 303
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
GN + + R +R A+L HYR +++ Q L +A+ +++W
Sbjct: 304 GNLELV------SRLRARGVEPVAVRAAILAHHYRSDWEWSEQVLADAQARVARWRAALD 357
Query: 343 SKG-----IIDPAVLSALYNDLNTVSAIQALHKLA-----RESTKNHDLLPIFNASAHIL 392
+ AV +AL +DL+ A++AL A D +P+ + A +L
Sbjct: 358 GPHAAAGVAVLDAVHAALSDDLDAPRALEALDAWAAGTLPGLVEAAADPVPVIDVVAALL 417
Query: 393 GIEV 396
G+ +
Sbjct: 418 GLRL 421
>gi|184201038|ref|YP_001855245.1| cysteinyl-tRNA synthetase [Kocuria rhizophila DC2201]
gi|310947188|sp|B2GIP6|MSHC_KOCRD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|183581268|dbj|BAG29739.1| cysteine--1D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase MshC [Kocuria rhizophila DC2201]
Length = 438
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 115/401 (28%), Positives = 181/401 (45%), Gaps = 50/401 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++++T ++ A D +YVCG T YD H+G+A + FD+L+RL R
Sbjct: 20 RVHDTSTGQLEPLAARD-GRASLYVCGITPYDATHMGHAATYVAFDLLHRLWRDAGW--S 76
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N+TD+DD ++ERA + T+ F D + L LAP H A
Sbjct: 77 VDYVQNVTDVDDPLLERADATGVD------WRELAESQTELFRTDMSALNVLAPQHYVGA 130
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN------------NEIIFDTS---------------- 157
T + +++ ++ ++ G AY A ++ FD
Sbjct: 131 TEVVDRIVPAVERLLERGLAYRAPAGTGQGGEPAPAGDVYFDVDAAGALRAEDPDAWVVG 190
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWH 216
S R + P++ K++P D +LW+ EP W+ + G GRPGWH
Sbjct: 191 STCRLAGERDRMMPLFADHGGDPDRTGKRDPMDPLLWRAHRAGEPSWDGASLGPGRPGWH 250
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
IECS ++ L + F + GGG DL FPHH+ + + A ++H + L+G
Sbjct: 251 IECSVIALDLLPRPFTVQGGGSDLAFPHHDMGAGHAYALSG-QPMAEHYVHTAMVGLDGE 309
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS GN + ++ L + VIRLA+L HYR +T + L +A L
Sbjct: 310 KMSKSRGNLVLVSTL------RAQGMDPAVIRLAILANHYRTDWFWTDELLEQARRRLGT 363
Query: 337 WPQTSTS-----KGIIDPAVLSALYNDLNTVSAIQALHKLA 372
W + + + AV +AL DLN+ +A+ A+ A
Sbjct: 364 WREAAAKQETAGADAMLEAVRAALGEDLNSPAALIAVDAWA 404
>gi|257068786|ref|YP_003155041.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
gi|310947175|sp|C7MCZ4|MSHC_BRAFD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|256559604|gb|ACU85451.1| cysteinyl-tRNA synthetase [Brachybacterium faecium DSM 4810]
Length = 416
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 108/410 (26%), Positives = 179/410 (43%), Gaps = 36/410 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++++T +IT + P R+YVCG T YD H+G+A D++ R LR
Sbjct: 19 LRLHDTRTGRITPVVPLTPGTARLYVCGITPYDSTHLGHAATYHAADLMRRALRDSG--L 76
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +N+TD+DD ++ERA ++ + + + F +D L +AP
Sbjct: 77 AVEMAQNVTDVDDPLLERADRDGVD------WRELAASQSALFAEDMEALRVIAPETYRS 130
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN------NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + ++I ++ + G AY + D ++ G S ++
Sbjct: 131 VSEAMDEIIAVVLALHARGRAYPVEAADAAGPDWYLDLAADGALGDVSGWSEEQMLAVFA 190
Query: 179 V----PEKYHKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDI 233
P++ K+ D +LW EP W++ GRGRPGWH+EC ++ +G FD+
Sbjct: 191 ERGGDPDREGKRGRFDPLLWSAEREGEPAWDAGVLGRGRPGWHVECVCIAEEGIGLPFDV 250
Query: 234 HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE 293
GG DLIFPHH+ A S A + H+G + +G KMSKS GN + ++ L+
Sbjct: 251 QAGGSDLIFPHHDLSAAHSVALG--RPFAAAYAHSGMVGYQGEKMSKSLGNLVFVHRLV- 307
Query: 294 TKKFGGRSWPAPVIRLAMLMTHYREPIDFTV---QRLTEAEILLSKWPQTSTSKGIIDPA 350
VIRL ++ HYR ++T R E + + A
Sbjct: 308 -----REGTDPMVIRLVLMAHHYRSDWEWTDGELDRAAERLKSYRLAARRGDHRPATVEA 362
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN------ASAHILGI 394
+ +AL +DL+TV A++AL A + + A + GI
Sbjct: 363 LRAALRDDLDTVRALEALDAWAEGGSSSGAETDPAAPGDVPTAMDALFGI 412
>gi|116747926|ref|YP_844613.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
gi|116696990|gb|ABK16178.1| cysteine synthases [Syntrophobacter fumaroxidans MPOB]
Length = 773
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 109/492 (22%), Positives = 190/492 (38%), Gaps = 56/492 (11%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++ +N LERK +F+ + +R+ V GP + + +G +R ++ D L R L
Sbjct: 302 LEPDFHFFNFLERKKVDFKPVVEGKVRICVTGPPLDNPLTLGESRRFLLADFLARFLTAK 361
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V V + D+D + I S+ +S T + ++D RLA
Sbjct: 362 SF--SVEQVVQVPDLDSRTI------GGSLASRMPLSAYTRQQLDLILEDLDRLAVKRAY 413
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
PR++ HI + + ++ G AY+ + F+ S +YG+ SR + + ++GT V
Sbjct: 414 RYPRSSEHINAITEDTKTLVNKGLAYDKLRSVYFNLSGSKDYGALSRVNLKKIRIGTTVD 473
Query: 181 EKYHKK-NPADFILWKRSTPME----PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
++K NP DF L KR+T E ++ WG P WHI ++++ LG DI
Sbjct: 474 LDAYEKLNPRDFALLKRATLAELKRGVCLKTDWGNVIPTWHIAAASVALRELGAPIDIQV 533
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
+D +FPH EN + AN+W+ + + + + T L
Sbjct: 534 SSVDFLFPHLENVREIGHALTG-KPFANVWMLSERMWSGADVKREDGLSEETPIRELNKL 592
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST------------- 342
+ +R +L HYR+PI T + + A + +
Sbjct: 593 -----GYSPIEVRYWLLSNHYRKPIHVTPENIDNARRGYHRLREFIHRVQHARTASQDHK 647
Query: 343 ----SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNA 387
++ AL +DLN A L + R+ D + +F
Sbjct: 648 LLPEMIYALEQGFFDALADDLNVPRAFACLFRFIRQFNPILDREEFSEAQRRQITDVFYK 707
Query: 388 SAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
I+GI + L+ R ++ +AD IR+ L +G + D
Sbjct: 708 INGIMGIFDLELQPLSEDDQE---LIHRREKARGSGEWDTADRIRETLLQRGLKVIDT-- 762
Query: 448 PDNGQRMTRWKQ 459
TRW++
Sbjct: 763 ----PLGTRWER 770
>gi|239978594|ref|ZP_04701118.1| cysteinyl-tRNA synthetase [Streptomyces albus J1074]
Length = 385
Score = 204 bits (520), Expect = 2e-50, Method: Composition-based stats.
Identities = 118/365 (32%), Positives = 186/365 (50%), Gaps = 25/365 (6%)
Query: 19 QAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
+ + P + R+YVCG T YD H+G+A FD++ R+ + ++ V YV+N+TD+DD
Sbjct: 6 KTLTPGPVARLYVCGITPYDATHMGHAATYNAFDLVQRV--WLDTKRQVHYVQNVTDVDD 63
Query: 78 KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
++ERA ++ + + + T F +D T L + P A IP++I L++
Sbjct: 64 PLLERAVRDGVE------WTGLAERETALFREDMTALRMIPPRDYIGAVEAIPRIIPLVE 117
Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGTRVPEKYHKKNPADFIL 193
+ G AYE ++ F + P++G S + PE+ KKNP D +L
Sbjct: 118 RLRDAGAAYELEGDLYFSVEADPHFGEVSHLDATAMRLLSAERGGDPERPGKKNPLDPML 177
Query: 194 WKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
W + EP W+ G+GRPGWHIEC A++ +LG FD+ GGG DL+FPHHE + +
Sbjct: 178 WMAAREGEPSWDGGSLGQGRPGWHIECVAIALDHLGMGFDLQGGGSDLVFPHHEMGASHA 237
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A A+ ++H G + L+G KMSKS GN + ++ L IRLA+
Sbjct: 238 HAATGEYPFAHSYVHAGMVALDGEKMSKSKGNLVFVSAL------RRAGVEPAAIRLALH 291
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----PAVLSALYNDLNTVSAIQA 367
HYR ++T L EA L++W + D V +AL +DL+ +A++A
Sbjct: 292 AHHYRADWEWTDATLQEATRRLARWRAAVSRPDGPDASAVVEQVRAALADDLDAPAALRA 351
Query: 368 LHKLA 372
+ A
Sbjct: 352 VDAWA 356
>gi|256825221|ref|YP_003149181.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
gi|310947190|sp|C7NHQ9|MSHC_KYTSD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|256688614|gb|ACV06416.1| cysteinyl-tRNA synthetase [Kytococcus sedentarius DSM 20547]
Length = 438
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 111/405 (27%), Positives = 177/405 (43%), Gaps = 33/405 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++++T IT +YVCG T YD H+G+A + FD++ R LR
Sbjct: 20 RVHDTARGAITPLTPRPGQEAGLYVCGITPYDATHLGHAATYLTFDLVNRALRAAG--HP 77
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +V+N+TD+D+ ++ERA ++ + S+ Q F D L +AP A
Sbjct: 78 VRFVQNVTDVDEPLLERAERDGV------HWEELASREIQLFRDDMAALRIIAPDAYVGA 131
Query: 126 TNHIPQMIYLIQNIILHGHAYE------------ANNEIIFDTSSIPNYGSFSRRKIDEQ 173
IP + I+ ++ G AY + ++ D + +P +G S +
Sbjct: 132 VEGIPSDVAAIRAMLESGRAYRVPAEDAAADAGESPADVYLDLAQVPTFGEVSHWTPTQM 191
Query: 174 KMGTRVPEKY----HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLG 228
K++ D +LW+ EP WE G GRPGWHIEC+ ++ +LG
Sbjct: 192 MEVFADRGGDPDRAGKRDRLDPLLWRAHREGEPHWEGGSLGAGRPGWHIECTTIARDHLG 251
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
F + GGG DL+FPHHE AQ+ + A ++H + L+G KMSKS GN + +
Sbjct: 252 TPFLVQGGGDDLVFPHHEMSAAQTRALTD-DAFAEHYVHQAMVGLDGEKMSKSKGNLVLV 310
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID 348
+ L + IRLA+L HYR ++T L A L +W + +
Sbjct: 311 SRLRAAGE------DPAAIRLALLSQHYRTAWEWTDAHLEAARQRLDRWRHAAQTA-TAS 363
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
P+ A A Q ++A + L + + +LG
Sbjct: 364 PSTADAEDAPAGDAVARQLAERIADDLDAPGALAVVDRWADAVLG 408
>gi|330468546|ref|YP_004406289.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
gi|328811517|gb|AEB45689.1| cysteinyl-tRNA synthetase [Verrucosispora maris AB-18-032]
Length = 395
Score = 204 bits (519), Expect = 2e-50, Method: Composition-based stats.
Identities = 119/410 (29%), Positives = 186/410 (45%), Gaps = 37/410 (9%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
Y++ + + P MYVCG T YD H+G+A MI FD++ R+ R E V
Sbjct: 2 YDSARQAVHPTDP--PGTATMYVCGITPYDATHLGHAATMITFDLVQRMWRDAGHE--VR 57
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H A
Sbjct: 58 YVQNVTDIDDPLLERAERDG------EDWKVLAMRETALFREDMEALRIIPPAHYIGAVE 111
Query: 128 HIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY- 183
IP++ + ++ AY + ++ FD S+ P +G S E
Sbjct: 112 SIPEIAEKVLVLLKDDAAYRLDDGTGDVYFDISAAPRFGYESNLSRAEMLELFPERGGDP 171
Query: 184 ---HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++P D +LW+ + EP W G GRPGWHIEC+ ++ LG D+ GGG D
Sbjct: 172 DRAGKRDPLDPLLWRGAREGEPSWPGGELGPGRPGWHIECTVIALALLGNTIDVQGGGND 231
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
LIFPHHE A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 232 LIFPHHECSAAHAERLTGAAPFAGHYVHAGMIGLDGEKMSKSLGNLVFVSRLRAD----- 286
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----GIIDPAVLSA 354
+RLA+L HYR +T L A L +W + + + AV
Sbjct: 287 -KVDPMAVRLALLSGHYRADRSWTDDLLATAHQRLDRWRRAAAAPAGPSGEAFLAAVRDR 345
Query: 355 LYNDLNTVSAIQALHKLAREST-------KNHDLLPIF-NASAHILGIEV 396
L +DL++ A++ + A ++ + +F +LGI +
Sbjct: 346 LSDDLDSPGALRLADEWADQTLTPSPDTPTDPTAPALFSRTLDALLGIRL 395
>gi|71894372|ref|YP_278480.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
gi|71851160|gb|AAZ43769.1| cysteinyl-tRNA synthetase [Mycoplasma synoviae 53]
Length = 406
Score = 204 bits (519), Expect = 3e-50, Method: Composition-based stats.
Identities = 122/429 (28%), Positives = 197/429 (45%), Gaps = 39/429 (9%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVL---YRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
++YVCGPTVYD HIGN RP++ FD++ R L+ + ++ NITDIDDKII +A
Sbjct: 3 KIYVCGPTVYDELHIGNMRPILTFDLMLKAARYLKKDF-----IFIHNITDIDDKIIFKA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+++ N + + K +Q+++ + T T ++ + + +
Sbjct: 58 KEQ------NISEKELAQKYSQKYLNHLKTFSVDTITKLEYVTKNLEYIESFLDKLYKRD 111
Query: 144 HAY--EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+AY E + ++ NYG S + +D+ + K K N ADF LWK ++
Sbjct: 112 NAYLIENSGLYFNVEKNLNNYGKISNQNLDDMHFDFDLNSKLQKYNKADFALWKNTSEG- 170
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
++S +G+GRPGWH EC A+ G DIHGGG+DLIFPHHENE Q +
Sbjct: 171 IKFDSKFGQGRPGWHTECVALIEKNFGDSQLDIHGGGVDLIFPHHENENIQYQALY-QKD 229
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
W+ +G +NL KMSKS N I+++ LE ++ LM+ I
Sbjct: 230 ITKKWLRSGQINLNNEKMSKSLQNIISVDAFLENN-------SGNTLKFIFLMSSLTANI 282
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKG----IIDPAVLSALYN---DLNTVSAIQALHKLAR 373
+ +++A L K + S I P +S +L+ + ++ L +
Sbjct: 283 NLNENLISDASNLDKKLIKLSFLAKVNNLEIKPCDVSKEMEFLFELSFSKFMFEVNALLK 342
Query: 374 ESTKNH-DLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ KN + L + LG K + I ++ L++K + SAD +R
Sbjct: 343 NANKNDLEALNKLLFLFNTLGFSYNKLDFSSEIQT-----YKKWKAALELKDYKSADLLR 397
Query: 433 KQLESKGFI 441
+ L K I
Sbjct: 398 EDLLKKNLI 406
>gi|294811722|ref|ZP_06770365.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|326440529|ref|ZP_08215263.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294324321|gb|EFG05964.1| cysteinyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
Length = 409
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 109/344 (31%), Positives = 171/344 (49%), Gaps = 23/344 (6%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNI-RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++I++T + P + R+YVCG T YD H+G+A FD++ R+ +
Sbjct: 17 RDLQIHDTATGGA---ITLTPGPVARIYVCGITPYDATHLGHAATYNAFDLVQRV--WLD 71
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
++ V YV+N+TD+DD ++ERA ++ + + + + T F +D T L L P H
Sbjct: 72 TKRQVHYVQNVTDVDDPLLERALRDG------EDWTRLAERETALFREDMTALRMLPPKH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK----MGT 177
A IP+++ L++ ++ G AYE + +I F S P++G S +
Sbjct: 126 YIGAVEAIPRIVPLVERLLGAGAAYELDGDIYFSVESDPHFGEVSHLDAAAMRLLSAERG 185
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-WHIECSAMSSHYLGKVFDIHGG 236
PE+ KKNP D +LW + EP W+ WHIEC A++ +LG FD+ GG
Sbjct: 186 GDPERPGKKNPLDPMLWLAARSGEPSWDGGGLGPGRPGWHIECVAIALDHLGMGFDVQGG 245
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DL+FPHHE + + A ++H G + L G KMSKS GN + ++ L
Sbjct: 246 GSDLVFPHHEMGASHAQVLTGEHPFAQAYVHAGMVALHGEKMSKSRGNLVFVSAL----- 300
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
IRLA+L HYR ++T L EA L++W
Sbjct: 301 -RRDGVDPAAIRLALLAHHYRADWEWTDGVLQEAVERLARWRAA 343
>gi|15841621|ref|NP_336658.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
gi|13881872|gb|AAK46472.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CDC1551]
Length = 375
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 121/389 (31%), Positives = 183/389 (47%), Gaps = 34/389 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG T YD H+G+A + FD+++RL E YV+NITDIDD + ERA ++
Sbjct: 1 MYVCGITPYDATHLGHAATYVTFDLIHRLWLDLGHELH--YVQNITDIDDPLFERADRDG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ F +D L L P AT I +M+ LI+ ++ G AY
Sbjct: 59 VD------WRDLAQAEVALFCEDMAALRVLPPQDYVGATEAIAEMVELIEKMLACGAAYV 112
Query: 148 ANN------EIIFDTSSIPNYGSFSRRK----IDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ +I F + +G S + + P + K + D +LW+ +
Sbjct: 113 IDREMGEYQDIYFRADATLQFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAA 172
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W SP+G GRPGWH+EC+A++ +G DI GGG DLIFPHHE A + C
Sbjct: 173 RPGEPSWPSPFGPGRPGWHVECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSG 232
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ A ++H G + +G KMSKS GN + ++ L + +RL +L HYR
Sbjct: 233 ERRFARHYVHAGMIGWDGHKMSKSRGNLVLVSAL------RAQDVEPSAVRLGLLAGHYR 286
Query: 318 EPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
++ Q L EA L +W + + + V L +DL+T AI AL
Sbjct: 287 ADRFWSQQVLDEATARLHRWRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWV 346
Query: 373 RESTKN--HDLLP---IFNASAHILGIEV 396
++ + HD + A +LG+++
Sbjct: 347 TDAVEYGGHDAGAPKLVATAIDALLGVDL 375
>gi|145594700|ref|YP_001158997.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
gi|310947216|sp|A4X6W9|MSHC_SALTO RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|145304037|gb|ABP54619.1| cysteinyl-tRNA synthetase [Salinispora tropica CNB-440]
Length = 404
Score = 204 bits (518), Expect = 3e-50, Method: Composition-based stats.
Identities = 104/344 (30%), Positives = 163/344 (47%), Gaps = 24/344 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++ R MYVCG T YD H+G+A MI FD++ R+ R +
Sbjct: 11 LMLFDSARRGTAASAPT--GTGTMYVCGITPYDATHLGHAATMITFDLIQRVWRDAGLD- 67
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H
Sbjct: 68 -VTYVQNVTDIDDPLLERAARDG------EDWKVLAMRETALFREDMEALRIIPPEHYVG 120
Query: 125 ATNHIPQMIYLIQNIILHGHAYE---ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
A IP + + ++ G AY ++ FD S+ P +G S ++
Sbjct: 121 AVESIPDIAERVLMLVKEGAAYRLEDGTGDVYFDISATPRFGYESHLSREQMLEIFPERG 180
Query: 182 KY----HKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K++P D +LW+ + EP W G GRPGWHIEC+ ++ + LG D+ GG
Sbjct: 181 GDPDRAGKRDPLDPLLWRGARADEPSWPGGDLGPGRPGWHIECAVIALNLLGAQIDVQGG 240
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHE A + A ++H G + L+G KMSKS GN + ++ L
Sbjct: 241 GNDLIFPHHECSAAHAELLTGQTPFARHYVHAGMIGLDGEKMSKSRGNLVFVSRLRAD-- 298
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
+RLA++ HY + + L A+ L +W +
Sbjct: 299 ----QVDPMAVRLALMSGHYHSDRSWNDELLATAQKRLGRWRKA 338
>gi|239917682|ref|YP_002957240.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|281413827|ref|ZP_06245569.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|310947191|sp|C5CBT9|MSHC_MICLC RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|239838889|gb|ACS30686.1| cysteinyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
Length = 422
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 116/392 (29%), Positives = 182/392 (46%), Gaps = 40/392 (10%)
Query: 4 KIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++++T + + +YVCG T YD H+G+A + FD+L+R R
Sbjct: 18 RLRLHDTATGRTR--HPGNDGRRASLYVCGITPYDATHLGHASTYVAFDLLHRYWRAAGL 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YV+N+TD+DD ++ERA + + T F D L LAP H
Sbjct: 76 E--VAYVQNVTDVDDPLLERAEATGVD------WRALAEEQTDLFRADMAALEVLAPDHY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYG-----SFSRRKI 170
AT + ++ ++ ++ G AY ++ FD S + S +
Sbjct: 128 VGATEAVGLVVDAVETMLAAGRAYRVPGGDGEPEGDVYFDVRSAQSATDWRLGQVSAMDL 187
Query: 171 DEQKMGTRV----PEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSH 225
DE P++ K++P D +LW+ EP W+ G GRPGWHIECS +S
Sbjct: 188 DEMAAVFPERGGDPDRPGKRDPLDPLLWRVHREGEPAWDGRSLGSGRPGWHIECSVISRA 247
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+L F + GGG DL FPHHE A + D + A+ + H G + L+G KMSKS GN
Sbjct: 248 HLPAPFTVQGGGSDLRFPHHEFSAAHATAVDGL-PLAHTYAHTGMVALDGEKMSKSLGNL 306
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+ + R +R A+L HYR +++ Q LT+A+ +++W
Sbjct: 307 ELV------SRLRARGVEPVAVRAAILAHHYRSDWEWSEQVLTDAQARVTRWRAALDGPH 360
Query: 346 -----IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ AV +AL +DL+ A++AL A
Sbjct: 361 AAAGVAVLDAVHAALSDDLDAPRALEALDAWA 392
>gi|225468795|ref|XP_002262997.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
Length = 435
Score = 203 bits (517), Expect = 4e-50, Method: Composition-based stats.
Identities = 146/439 (33%), Positives = 210/439 (47%), Gaps = 79/439 (17%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
II RA + + + ++S+ Q+++ D T L CL+PTHQPR ++H+ Q+ +I
Sbjct: 1 IIRRANE------LGENPLTLSSRFCQEYLDDMTDLHCLSPTHQPRVSDHMDQIKDMITQ 54
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
II + AY + ++ F PNYG S RK++ + G RV K+NPADF LWK +
Sbjct: 55 IINNDCAYTIDGDVYFAVDKSPNYGRLSGRKLENNRAGERVAVDSRKRNPADFALWKAAK 114
Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
P EP W+SPWG GRPGWHIECSAMS+HYL FDIHGGG+DLIFPHHENEIAQSC A
Sbjct: 115 PGEPSWDSPWGPGRPGWHIECSAMSAHYLTFKFDIHGGGIDLIFPHHENEIAQSCAAC-Q 173
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
E + W+HNG + KMSKS GNF TI ++ + + +R +L THYR
Sbjct: 174 ESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQITDL-------YHPLALRYFLLGTHYRS 226
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGI-------------------------IDPAVLS 353
P+++++ +L A + QT + +
Sbjct: 227 PVNYSIAQLEIASEAVFYIYQTLRDCEDTLSLFQEVNGRNVCITPAAQDCIRTLQTDFQT 286
Query: 354 ALYNDLNTVSAI-QALHKLARESTKNHDLL--------------------PIFNASAHIL 392
+ +DL+T + +L + R ++L +L
Sbjct: 287 KMSDDLSTPHILNASLQEALRFINSCLNMLKKKQQKQQQLSAVESLTELGKEVKGVLSVL 346
Query: 393 GI-------EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
G+ EV ++ K + + L++ER + K K FS D IR L SKG
Sbjct: 347 GLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHLIEERALARKNKDFSKGDQIRADLASKG 406
Query: 440 FILEDYKNPDNGQRMTRWK 458
L D + T W+
Sbjct: 407 IALMD------VGKETIWR 419
>gi|281346768|gb|EFB22352.1| hypothetical protein PANDA_014037 [Ailuropoda melanoleuca]
Length = 468
Score = 203 bits (516), Expect = 6e-50, Method: Composition-based stats.
Identities = 132/478 (27%), Positives = 206/478 (43%), Gaps = 91/478 (19%)
Query: 46 PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQ 105
+ FD++ R+L +G + V ITD+DDKII RA + +N + + + + +
Sbjct: 1 SYVRFDIIRRILTRVFG-CNIIMVMGITDVDDKIIRRAAE------MNVSPASLANLYEE 53
Query: 106 QFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGS 164
F +D L L PT R T +IPQ+I I+ II +GHAY + FD SI +
Sbjct: 54 DFKQDMAALKVLPPTVYLRVTENIPQIISFIEGIIANGHAYSTAQGNVYFDLRSIGD--- 110
Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+ + P K++ +DF LWK + P E W SPWG+GRPGWHIECS +SS
Sbjct: 111 KYGKLVGAVPSPVGEPVDSDKRHASDFALWKAAKPQEVFWASPWGKGRPGWHIECSTISS 170
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSN 282
G+ DIH GG DL FPHHENEIAQ + + N ++H+G L++ + KMSKS
Sbjct: 171 LVFGRQLDIHSGGADLAFPHHENEIAQCEAFHQCRQWGNYFLHSGHLHVKGKEEKMSKSL 230
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAE----------- 331
N+ITI + L +++P V RL + + YR ID++ + EA+
Sbjct: 231 KNYITIKDFL-------KTFPPDVFRLFCMRSAYRSAIDYSDGTMLEAKQLLLAAAAFVE 283
Query: 332 -----------ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
+ AV +AL +D +T +A+ A+ L +
Sbjct: 284 DARAYMKGQLVCGPVRDDVLWERLRHTKDAVKAALADDFDTPAAVDAVMDLVHHGNRQLK 343
Query: 379 ---------------HDLLPIFNASAHILGIEVCKEHLNKNIS------IAIEKLVQERL 417
++ +GI + S +E+LV+ RL
Sbjct: 344 AHAKEPGGPRSPAVFGSIVSYVERFFETVGISLADRQSVSGDSSRATLHSVVEELVRFRL 403
Query: 418 ILLKMKKFSSA-----------------------DYIRKQLESKGFILEDYKNPDNGQ 452
+ + F+ A D +R+ L + G ++D + +
Sbjct: 404 QVRQ---FALATGAATREARRQQQLDRQPLLEACDALRRDLVTHGISIKDRSSTSTWE 458
>gi|300781182|ref|ZP_07091036.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
gi|300532889|gb|EFK53950.1| cysteine--tRNA ligase [Corynebacterium genitalium ATCC 33030]
Length = 412
Score = 203 bits (515), Expect = 6e-50, Method: Composition-based stats.
Identities = 120/411 (29%), Positives = 193/411 (46%), Gaps = 40/411 (9%)
Query: 5 IKIYNTLERK-ITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++T +++ I MYVCG T YD H+G+A + FD+++R L
Sbjct: 19 LTLFDTADQQAKEVDTTATTSGGEIGMYVCGITPYDSTHLGHAATYLTFDLVHRQLNANG 78
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV+NITD+DD + ERA ++ + T F D L+ + P
Sbjct: 79 --HSVHYVQNITDVDDPLFERAERDGVD------WRELGQSQTDLFRTDMEILSVIPPRD 130
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY--------EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
A + ++I ++Q ++ +G AY +I ++ +G S
Sbjct: 131 YIGAMESVDEVIAMVQTLLDNGSAYELVDDSGDHPVTDIYAPITATEQFGYESNLDRATM 190
Query: 174 KMGTRVPEKY----HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ K++P D +LW+ EP WE+ +G GRPGWHIECSA++++ LG
Sbjct: 191 EEYFAERGGDPERTGKRDPLDALLWRGHREGEPSWEARFGAGRPGWHIECSAIATNRLGT 250
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
F I GGG DL FPHHE A + A + + A ++H G + L+G KMSKS GN + ++
Sbjct: 251 QFAIQGGGSDLAFPHHEFSAAHAEAAYDVPRMAGHYVHAGMIALDGVKMSKSLGNLVFVH 310
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
+L E A IRLA+ HYR+ DF+ L +AE L+ W + ++ D
Sbjct: 311 KLRE------EGHDASAIRLAVFGGHYRDDRDFSYAVLDQAEQRLANWREALANEVSEDE 364
Query: 350 ------AVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ +AL +DLNT A++ + + + A +LG+
Sbjct: 365 AVGTVDKLRAALADDLNTPEALRIVDAAHGDHNGI-----VAAALDGLLGV 410
>gi|319442059|ref|ZP_07991215.1| cysteinyl-tRNA synthetase [Corynebacterium variabile DSM 44702]
Length = 430
Score = 203 bits (515), Expect = 7e-50, Method: Composition-based stats.
Identities = 104/396 (26%), Positives = 178/396 (44%), Gaps = 31/396 (7%)
Query: 5 IKIYNTLERKITEFQA-IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +Y+T + + + + +YVCG T YD H+G+A + FD+++R L
Sbjct: 19 LSLYDTADDVVRPVRTDWASGEVGIYVCGITPYDSTHLGHAATYVTFDLVHRALLDNG-- 76
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V +V NITD+DD + ERA ++ + + F D L+ + P
Sbjct: 77 HRVHFVENITDVDDPLFERAERDGVD------WRDLGTSQIDLFRSDMEALSVIPPREYI 130
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
A + ++I L+ ++ G AY + + D + +
Sbjct: 131 GAMESVDEVIDLVSRLLEVGAAYRLDGDEFPDIYVDHTFTEQFGYESRYTADEMAEFFAE 190
Query: 184 H--------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
K+ P D ++W+ EP W++P+G GRPGWH+ECSA++++ LG F + G
Sbjct: 191 RGGDPDRAGKRYPLDALVWRARRDGEPSWDAPFGAGRPGWHVECSAIATNRLGASFAVQG 250
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHE A + A ++ A+ ++H G + L+G KMSKS GN + +++L
Sbjct: 251 GGSDLRFPHHEFSAAHAEAAHGCDRMADHYVHTGMIGLDGVKMSKSLGNLVFVSKLTAD- 309
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT--------STSKGII 347
A +RL + HYR D++ L AE L++W +++ +
Sbjct: 310 -----GHDASAVRLGLYEQHYRADRDWSDAVLARAEDRLARWRAAAQTAASRPASAAAQL 364
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
V +AL +DL+T + + + P
Sbjct: 365 VADVRAALSDDLDTPRVLTLIDSWCARISDTAASAP 400
>gi|38233849|ref|NP_939616.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae NCTC 13129]
gi|61216544|sp|Q6NH81|MSHC_CORDI RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|38200110|emb|CAE49790.1| cysteinyl-tRNA synthetase [Corynebacterium diphtheriae]
Length = 414
Score = 202 bits (514), Expect = 1e-49, Method: Composition-based stats.
Identities = 110/411 (26%), Positives = 186/411 (45%), Gaps = 34/411 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +++T ++ I + +D + +YVCG T YD H+G+A + FD++ R L
Sbjct: 19 LSLFDTSDQLIKPVE-VDTPEVGVYVCGITPYDSTHLGHAATYLTFDLINRQLIDAG--H 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+NITD+D+ + ERA ++ + S F D L+ + P H
Sbjct: 76 RVHFVQNITDVDEPLFERALRDGVD------WRELGSSQIDLFRSDMENLSVIPPRHYVG 129
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
A IP++I +++ ++ +G AY ++ D + + + +
Sbjct: 130 AMESIPEVIAMVETMLANGTAYIVESDSYRDIYASITATTQFGYESHYSRELMEQFFAER 189
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
KK+ D ++W+ EP W++P+G GRPGWH+ECSA+++H+LG F I GG
Sbjct: 190 GGDPERVGKKDSLDALIWRAHRLGEPSWDAPFGAGRPGWHVECSAIATHHLGSHFAIQGG 249
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHE A + + A ++H G + L+G KMSKS GN + + +
Sbjct: 250 GSDLIFPHHEFSAAHAEATFGESRMAGHYVHTGMIGLDGTKMSKSLGNLVFV------SR 303
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV----- 351
+ IRL + HYR+ D++ LT A+ W + + +
Sbjct: 304 LTSEGYHPSDIRLGVFAGHYRDDRDWSTDLLTAAQERRQAWITAADNARDVQQVQQTIQK 363
Query: 352 -LSALYNDLNTVSAIQALHKLARES---TKNHDLLPIFNA--SAHILGIEV 396
L NDLNT + + + A A +LG+++
Sbjct: 364 IRHLLANDLNTPAVLAEVDNWANLIPLNDSARTEAGRLMASGLDALLGVKI 414
>gi|256832427|ref|YP_003161154.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Jonesia denitrificans DSM 20603]
gi|310947186|sp|C7R3Z4|MSHC_JONDD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|256685958|gb|ACV08851.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Jonesia denitrificans DSM 20603]
Length = 423
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 126/420 (30%), Positives = 186/420 (44%), Gaps = 45/420 (10%)
Query: 6 KIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +T ++ E + P MYVCG T YD HIG+A I FD+LYR
Sbjct: 20 RVMDTSSGQLVE--TVRPGVGESSMYVCGITPYDATHIGHAATYIAFDLLYRAWLDAG-- 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ V Y N+TD+DD ++ERA + + + F D + L L P
Sbjct: 76 QRVVYTSNVTDVDDPLLERATATGVD------WTELATSQITLFFDDMSALGVLPPHTYL 129
Query: 124 RATNHIPQMIYLIQNIILHGHAYEAN------------NEIIFDTSSIPNYGSFSRRKID 171
A +P +I ++++ G AY +I D +S P++GS S +
Sbjct: 130 SAVESVPMVISATRHLLESGRAYRVPVPAQERPVHSPAYDIYADVTSDPDFGSISGYTSE 189
Query: 172 E----QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHY 226
E P KKNP D I+WK EPGW+ G GRPGWHIEC+ ++
Sbjct: 190 ERVRLFTDRGGDPATPGKKNPIDPIMWKAQREGEPGWDGDDLGWGRPGWHIECTTIAHCG 249
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
+G+ + GGG DLIFPHHE A + + A++ H G + +G KMSKS GN +
Sbjct: 250 IGRSCTVQGGGSDLIFPHHEMSSAHARALFGQDAGASVHAHAGLIAYQGEKMSKSKGNLV 309
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+ + IRLA+L HYR+ ++T L W Q ++ G
Sbjct: 310 FV------SRLRQEGVDPMAIRLAILANHYRDEWEWTSDVLDAGIKRHQLWLQAMSTNGG 363
Query: 347 IDP-----AVLSALYNDLNTVSAIQALHKLARESTKNHDLLP-----IFNASAHILGIEV 396
P A+ AL NDL+ A+ A+ A + +D P + A +LGI +
Sbjct: 364 PHPGATLAAMREALSNDLDAPRALDAVDAWAYATLAGNDEDPGAPGVVSRAVNALLGIRL 423
>gi|326332343|ref|ZP_08198622.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Nocardioidaceae bacterium Broad-1]
gi|325949832|gb|EGD41893.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Nocardioidaceae bacterium Broad-1]
Length = 410
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 117/398 (29%), Positives = 190/398 (47%), Gaps = 29/398 (7%)
Query: 3 KKIKIYNTLERKITEFQAID-PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++Y+ + + +YVCG T YD H+G+A + FD+L+R
Sbjct: 17 PEVQVYD---HQRDAVVPTEGQGRRSLYVCGITPYDATHMGHANTYVAFDLLHRAWLNAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V Y +N+TD+DD ++ERA + + + T+ F +D L + P H
Sbjct: 74 YE--VGYTQNVTDVDDPLLERA------DKVGIEWEALAERETELFRQDMEALRVVPPQH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-- 179
A IP ++ LI + G Y+ + ++ + +G SR +E
Sbjct: 126 YIGAVESIPLVLSLIGELEEAGAIYKVDEDVYASVAVDDAFGEESRMSREEMLELFGERG 185
Query: 180 --PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
PE+ KK+P D +LW+ P EP W SP+G GRPGWHIEC+A++ +LG F + GG
Sbjct: 186 GDPERPGKKDPLDPLLWRAERPGEPAWPSPYGPGRPGWHIECTAIALEHLGAGFTVQAGG 245
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL+FPHHE + + A ++ A I+ H G + +G KMSKS GN + ++ L +
Sbjct: 246 SDLVFPHHEMSGSHARSAG--KEFAEIYTHGGMVAYDGHKMSKSRGNLVFVSALRNS--- 300
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS-----TSKGIIDPAVL 352
IRL +L HYR+ ++T +L +A +++W + + VL
Sbjct: 301 ---EIDPMAIRLVLLGHHYRDDWEWTDAKLFDAVDQIAEWRKAVALGRGAPAAPVVETVL 357
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
AL +DL+ A+QA+ + L +A A
Sbjct: 358 GALADDLDAPRAVQAVDAWVAATLGEGGLAETSDALAG 395
>gi|152965802|ref|YP_001361586.1| cysteinyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
gi|310947187|sp|A6W933|MSHC_KINRD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|151360319|gb|ABS03322.1| Cysteine--tRNA ligase [Kineococcus radiotolerans SRS30216]
Length = 419
Score = 202 bits (513), Expect = 1e-49, Method: Composition-based stats.
Identities = 102/391 (26%), Positives = 176/391 (45%), Gaps = 33/391 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +++T + + +YVCG T YD H+G+A + FD+L R R
Sbjct: 17 PRVHLHDTATGGLVPVGP-EAGTATLYVCGITPYDATHLGHANTYVAFDLLGRAWRDAGL 75
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V YV+N+TD+DD ++ERA + + F D L+ + P
Sbjct: 76 D--VRYVQNVTDVDDPLLERAEATGVD------WRDLAESQVELFRGDMEALSVVPPQRY 127
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
+ + +++++ G AY + ++ F + +G+ ++
Sbjct: 128 LGVVEAVDLVAEAVRDLLAAGAAYRVPGTDGGPDGDVYFPVDADAAFGTVGGYDLETMLA 187
Query: 176 ----GTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLGKV 230
P++ K+NP D +LW+ P EP WE+ GRGRPGWHIEC+A++ +LG
Sbjct: 188 LSAERGGDPQRPGKRNPLDPLLWRVERPGEPAWEAGELGRGRPGWHIECTAIALEHLGMP 247
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRI-EKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+ GG DL+FPHHE A + A + H+G + L+G KMSKS GN + ++
Sbjct: 248 IDVQAGGSDLVFPHHEMGAAHAHLLRPRARPFARAYAHSGMVALDGEKMSKSKGNLVLVS 307
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP 349
L+ V+RLA++ H+R ++T + L +A +W +
Sbjct: 308 RLVAAGVPAA------VVRLAIVDHHWRTDWEWTDEVLAQARARHERWSAAVAAPAGPPA 361
Query: 350 AVL-----SALYNDLNTVSAIQALHKLARES 375
L L +DL+ A+ A+ ++
Sbjct: 362 EALLATVRERLADDLDAPGAVAAVDAWVEQA 392
>gi|307210717|gb|EFN87140.1| Cysteinyl-tRNA synthetase, cytoplasmic [Harpegnathos saltator]
Length = 729
Score = 201 bits (510), Expect = 3e-49, Method: Composition-based stats.
Identities = 148/603 (24%), Positives = 227/603 (37%), Gaps = 169/603 (28%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFD------------- 51
+++YN+L RK F + I Y CGPTVYD +H+G+AR I FD
Sbjct: 20 LQLYNSLTRKKEVFVPQFGNRILWYSCGPTVYDASHMGHARSYISFDILRRVLSDYFGYD 79
Query: 52 -------------VLYRLLRYYYGEKCV-------------TYVR----N----ITDIDD 77
++ R + Y EK V V N ITD+D
Sbjct: 80 VLYVMNITDIDDKIIKRARQNYLYEKYVEENHNLNTILDDAKQVMSNFENTVHTITDLDK 139
Query: 78 K-------------I--IERARQE-----------------------------HPSIPIN 93
K I +E+A +E +I +
Sbjct: 140 KCMLENMLSKLTKVIENLEKAVREKDEHEIAVLQELLLKEVKDLLSDWLDQLKGSTITEH 199
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ ++ +F KD L L P+ R + ++P++I +Q II +G AY +N +
Sbjct: 200 SIFNKLSKHWESEFHKDMDALNVLKPSVLTRVSEYVPEIIAFVQQIIDNGLAYGSNGSVY 259
Query: 154 FDTSSIPNYGSFSRRKID-----EQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWES 206
FD S K+ + V E K++ DF LWK S EP W+S
Sbjct: 260 FDVSKFDKQEKHFYAKLVPEAYGDTSSDLSVTEDKLSEKRSLTDFALWKSSKAGEPWWDS 319
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
PWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQ+ ++
Sbjct: 320 PWGKGRPGWHIECSVMASVICGENLDIHTGGVDLKFPHHDNELAQAEAYFDNSHWVKYFL 379
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H+G L + G KMSKS NF+TI + L + A +RLA L+ +++ +D++
Sbjct: 380 HSGHLTIAGCKMSKSLKNFVTIQDAL-------KKHSARQLRLAFLLHSWKDTLDYSDNT 432
Query: 327 LTE--------------------------AEILLSKWPQTSTSKG----IIDPAVLSALY 356
+ +KW + + +V AL
Sbjct: 433 MNMAVQYEKFLNEFFLNIKCRIRSLGKKTTIDTFAKWTDSEMELNRKFQVAKHSVHKALC 492
Query: 357 NDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHIL----------GI 394
++++T S + + +L +S D+ I G
Sbjct: 493 DNIDTRSVLDTIRELVVDSNVYMSQNKNPNTLLLRDIAVYITKMFVIFGAISSTHDSIGF 552
Query: 395 EVCKEHLNKNISIAI----EKLVQERLILL------KMKK-FSSADYIRKQ-LESKGFIL 442
+ E + N+ + E L R + K D +R L + G L
Sbjct: 553 PIDDEAVGTNVEETVMPYLEILANFRKKVRNCAKTLKANDILQECDILRDDILPNVGVRL 612
Query: 443 EDY 445
ED
Sbjct: 613 EDS 615
>gi|187631650|sp|Q4A786|SYC_MYCH7 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|144575567|gb|AAZ54003.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
Length = 406
Score = 200 bits (509), Expect = 4e-49, Method: Composition-based stats.
Identities = 127/424 (29%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
I+ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 6 INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 63
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT R T I ++I I+ +
Sbjct: 64 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 117
Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
G Y NN+++FD IPNYG S +KI+ K + DF+LWK++
Sbjct: 118 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESLLDKNTKKTKSNN----DFVLWKKTQK 173
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 174 GL-FFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN 232
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
A W +GF+NL G+KM+KS N + + + +IR L +
Sbjct: 233 -PIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 284
Query: 319 PIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
PI+ T + + + L+ K W ++ + L+ + A + +L
Sbjct: 285 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIEGKFAKANFLIMEL 344
Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
++ +N + IF + + + ++ ++ L+ K +S AD I
Sbjct: 345 IKQ-KENSTIRKIF--------LNLRFNFTKMRLDPESQEKIKNWNKLIMDKNYSEADKI 395
Query: 432 RKQL 435
R++L
Sbjct: 396 REEL 399
>gi|229820734|ref|YP_002882260.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Beutenbergia cavernae DSM 12333]
gi|310947174|sp|C5BVB1|MSHC_BEUC1 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|229566647|gb|ACQ80498.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Beutenbergia cavernae DSM 12333]
Length = 420
Score = 200 bits (508), Expect = 4e-49, Method: Composition-based stats.
Identities = 97/335 (28%), Positives = 150/335 (44%), Gaps = 31/335 (9%)
Query: 3 KKIKIYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++++ +T E MYVCG T YD H+G+A + FD+L R R
Sbjct: 20 REVRVRDTATG---ELTPAGHDGRASMYVCGITPYDSTHLGHANTYVSFDLLVRAWRDAG 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
VTYV+N+TD+DD ++ERA + + + F D L +AP H
Sbjct: 77 --LAVTYVQNVTDVDDPLLERAAATGVD------WRQLAADQIELFHHDMVALRVVAPEH 128
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE--------ANNEIIFDTSSIPNYGSFSRRKIDEQ 173
A +P ++ ++ ++ AY + ++ S+ P +GS E
Sbjct: 129 YIGAVESVPDVVRAVERMLADRAAYRVGAAADGAGDGDVYAALSADPRFGSLGSLDEAEM 188
Query: 174 KMGTRVPEKY----HKKNPADFILWKRSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLG 228
K+ P D +LW+ EP W GRGRPGWHIEC+ +++ +LG
Sbjct: 189 LELFGERGGDPDRLGKQAPLDPLLWRVEREEEPSWPGESLGRGRPGWHIECATIAARFLG 248
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
FD+ GGG DL FPHHE + A +H G + +G KMSKS GN + +
Sbjct: 249 VPFDVQGGGTDLEFPHHEMSESHLRVLTATAHPARAHVHGGMVAYQGHKMSKSRGNLVFV 308
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+EL+ + +RL +L HY E ++
Sbjct: 309 SELVAS------GVDPMAVRLVILAHHYAEDWEYE 337
>gi|325963276|ref|YP_004241182.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469363|gb|ADX73048.1| cysteinyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 425
Score = 200 bits (508), Expect = 5e-49, Method: Composition-based stats.
Identities = 113/425 (26%), Positives = 185/425 (43%), Gaps = 49/425 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++Y+T + + ++ MYVCG T YD H+G+A + FD+L R R
Sbjct: 16 MPAIRLYDTAAGREVALE--QENHPSMYVCGITPYDATHMGHASSYVAFDLLNRAWRDAG 73
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
E V YV+N+TD+DD ++ERA + + + F D L L P H
Sbjct: 74 QE--VAYVQNVTDVDDPLLERATATGVD------WRDLAAGQIELFQTDMEALNVLPPDH 125
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSFSR------- 167
A I ++ ++ ++ G AY+ + ++ +D +
Sbjct: 126 YVGAVESIGLIVPEVERLVSLGLAYKVDGTNGEPDGDVYYDVEAAGKQSVAPDAWTLGCI 185
Query: 168 ------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECS 220
++ P + K+ D +LW+ EP W G GRPGWHIEC+
Sbjct: 186 SGLNESEMLELFAERGGDPGRAGKRQALDPLLWRVEREGEPSWPGGSLGPGRPGWHIECT 245
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
++ YL + F + GGG DLIFPHHE + + A + H G + L+G KMSK
Sbjct: 246 VIAQKYLPQPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSK 304
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
S GN + +++L + IRL +L HYR +T +A+ +L+ W Q
Sbjct: 305 SKGNLVLVSKLRAAGE------DPAAIRLGILAHHYRSDWSWTDHGFEDAKAILASWRQA 358
Query: 341 STS-----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN------HDLLPIFNASA 389
+ A+ AL DLN +A+ A+++ A ++ + D + +A
Sbjct: 359 LPHAPAGSAAPLVAAMREALAADLNAPAAVAAVNRWAEQALSDGGPASPADQAMVRDAVD 418
Query: 390 HILGI 394
+LG+
Sbjct: 419 ALLGV 423
>gi|220912666|ref|YP_002487975.1| cysteinyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|310947172|sp|B8H8K8|MSHC_ARTCA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|219859544|gb|ACL39886.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Arthrobacter chlorophenolicus A6]
Length = 410
Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats.
Identities = 113/427 (26%), Positives = 183/427 (42%), Gaps = 49/427 (11%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
I++++T + MYVCG T YD H+G+A + FD+L R R
Sbjct: 1 MPAIRLFDTAAGHEVLLE--SGDRPSMYVCGITPYDATHMGHAASYVAFDLLNRAWRDAG 58
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
K V YV+N+TD+DD ++ERA N + F D L L+P H
Sbjct: 59 --KDVDYVQNVTDVDDPLLERA------TATNVDWRDLAQSQIDLFQTDMEALNVLSPDH 110
Query: 122 QPRATNHIPQMIYLIQNIILHGHAY-------EANNEIIFDTSSIPNYGSFSR------- 167
A I ++ ++ ++ G AY E + ++ +D +
Sbjct: 111 YVGAVESISLIVPQVERLVSQGLAYTVPGTNGEPDGDVYYDVEAAGKQSVAPDAWSLGSI 170
Query: 168 ------RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECS 220
++ P + K+ D +LW+ + EP W + G GRPGWHIEC+
Sbjct: 171 SGLSESEMLELFAERGGDPGRSGKRQALDPLLWRVARDGEPSWPGASLGDGRPGWHIECT 230
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
++ YL F + GGG DLIFPHHE + + A + H G + L+G KMSK
Sbjct: 231 VIAQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLAGV-PLARHYAHAGMVGLDGEKMSK 289
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
S GN + +++L + IRLA+L HYR +T + A+ L+ W +
Sbjct: 290 SKGNLVLVSKLRAAGE------NPAAIRLAILAHHYRSDWSWTDEGFAAAKADLAAWRRA 343
Query: 341 STS-----KGIIDPAVLSALYNDLNTVSAIQALHKLAREST------KNHDLLPIFNASA 389
+ + +AL DL+ +A+ A+ + AR++ D + +A
Sbjct: 344 LDHAPQGSAAALVEEMRAALAADLDAPAAVAAVSRWARQANDGGAPASAPDQALVRDAVD 403
Query: 390 HILGIEV 396
+LG+ +
Sbjct: 404 ALLGVRL 410
>gi|111153388|emb|CAJ65144.1| Cysteinyl-tRNA synthetase (Cysteine--tRNA ligase) (CysS1) [Frankia
alni ACN14a]
Length = 458
Score = 199 bits (506), Expect = 7e-49, Method: Composition-based stats.
Identities = 132/460 (28%), Positives = 190/460 (41%), Gaps = 79/460 (17%)
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E VT V+N+TDIDDKII A ++ S+ + ++ T+ F + L PT Q
Sbjct: 4 EHEVTLVQNVTDIDDKIIVNADRDGTSV------WELATRQTRAFDDAYRTIGILPPTIQ 57
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
PRAT HIP+MI LI +I GHAY + F S P YG+ S ++ D +
Sbjct: 58 PRATGHIPEMIALISALIAGGHAYAGAGSVWFRVGSFPGYGALSHQRPDSM--LPSAESE 115
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K +P DF LWK + P EP W SPWG GRPGWH+ECSAM+ YLG VFDIHGGGLDL+F
Sbjct: 116 PGKADPRDFALWKAARPGEPFWSSPWGDGRPGWHLECSAMAGKYLGPVFDIHGGGLDLVF 175
Query: 243 PHHENEIAQSCCADRI------EKTANIWIHNGFLNLEGRKMSKSNGNFITINE------ 290
PHHENE AQ+ CA E+ A W+H G L G KMSKS GN + + +
Sbjct: 176 PHHENERAQTVCAAGGAAGAGAEEMARYWMHVGLLTTGGTKMSKSLGNSVLVADALEAVR 235
Query: 291 -------LLETKKFGGRSWPAPVIRLAMLMT-----HYREPIDF--------------TV 324
LL + + + R +D
Sbjct: 236 PQVLRYHLLSAHYRSTLEYTPEALGESAAAHDRVETFVRNALDILGGPGEAAALAADDGP 295
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV------------------SAIQ 366
+++ ++ S + G + T A+
Sbjct: 296 SAVSDGRRRTARGGAASDAVGAAAGGFGAGGPEAGLTPQRAWADFAAAMDDDLAVGRALA 355
Query: 367 ALHKLARESTKNHDLL---------PIFNASAHILGIEVCKE------HLNKNISIAIEK 411
A+ + + + +LG++ ++ L + ++
Sbjct: 356 AIFGAVGQGNQVLSKAHSRKLAGWVDVTRRMLGVLGLDPHEQWPSAGAELRPALDGVVQI 415
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ R + F+ AD IR +L + G I+ED
Sbjct: 416 ALDLRSAARARRDFAEADSIRSRLAAAGLIVEDTPEGQRW 455
>gi|323651394|gb|ADX97543.1| cysteinyl-tRNA synthetase [Terra1 virus]
Length = 487
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 131/497 (26%), Positives = 201/497 (40%), Gaps = 84/497 (16%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+ I MYVCGPTVY+ +HIG+AR ++ D++ R + + V NITDIDDKII+ A
Sbjct: 3 NTINMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQDT-HLVMNITDIDDKIIKAA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S ++ K +F + +L P R + I +I IQ II +
Sbjct: 62 NDQLVS------WKTLSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINND 115
Query: 144 HAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK----YHKKNPADFILWKRST 198
AY ++ + FDT N G ID ++ K++ DF LWK
Sbjct: 116 FAYVTSDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKSRA 175
Query: 199 PMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
+ G+ + G PGWHIECSAM +G +IH GG+DL FPHH NE
Sbjct: 176 DYDVGFFVEFIFNNAIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNECL 235
Query: 251 QSCCADRI----------EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
Q+ EK ++H G L +EG+KMSKS NF TI+E+LET
Sbjct: 236 QANAYYHPKYKPNTNINTEKWTQEFMHVGHLCVEGQKMSKSLKNFSTIDEVLETINSNE- 294
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-- 358
+R + ++R+P++F + A+ ++ Y+D
Sbjct: 295 ------MRWMFMQNNWRKPMEFNNAVIEHAKNFNQIINNFLNRTANYPFNIMDIKYSDNE 348
Query: 359 --------------------LNTVSAIQALHKLARESTKNHDL--------LPIFNASAH 390
+ L L ++ D I N +
Sbjct: 349 IQFKKETQKNISNISNNLSKFEFHHLVNNLIDLISKTNIYLDKPNPNESVVKKITNYILN 408
Query: 391 I---LGIEVCKEHLNKNISIAIEKLVQERLILLK---MKK---------FSSADYIRK-Q 434
+ LG + + + +IS ++ +V+ R K K F+ D R +
Sbjct: 409 LITQLGFNY-ETNNSIDISNIMKVIVETRTDYRKITRNKNISKDVKNEIFNVLDSERNLR 467
Query: 435 LESKGFILEDYKNPDNG 451
L S G LED ++ +
Sbjct: 468 LPSIGISLEDTRDSSSW 484
>gi|72080968|ref|YP_288026.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 7448]
Length = 401
Score = 199 bits (505), Expect = 1e-48, Method: Composition-based stats.
Identities = 126/424 (29%), Positives = 202/424 (47%), Gaps = 39/424 (9%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
++ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 1 MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 58
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT R T I ++I I+ +
Sbjct: 59 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVRVTEKIEKIIEYIKLLE 112
Query: 141 LHGHA-YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
G Y NN+++FD IPNYG S +KI+ K + DF+LWK++
Sbjct: 113 KKGFTYYNKNNDLVFDILKIPNYGIISGQKIESLLDKNTKKTKSNN----DFVLWKKTQK 168
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 169 GL-FFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN 227
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
A W +GF+NL G+KM+KS N + + + +IR L +
Sbjct: 228 -PIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTV 279
Query: 319 PIDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
PI+ T + + + L+ K W ++ + L+ + A + +L
Sbjct: 280 PINLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIEGKFAKANFLIMEL 339
Query: 372 ARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
++ +N + IF + + + ++ ++ L+ K +S AD I
Sbjct: 340 IKQ-KENSTIRKIF--------LNLRFNFTKMRLDPESQEKIKNWNKLIMDKNYSEADKI 390
Query: 432 RKQL 435
R++L
Sbjct: 391 REEL 394
>gi|312601583|gb|ADQ90838.1| Cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 168]
Length = 404
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 116/423 (27%), Positives = 190/423 (44%), Gaps = 37/423 (8%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
I+ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 4 INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 61
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT + T I ++I I+ +
Sbjct: 62 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
G Y N D ++ K+ DF+LWK++
Sbjct: 116 KKGFTYYNKNN---DLVFDILKIPNYGIISGQKIESLLDKNTKKTKSKKDFVLWKKTQKG 172
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 173 L-FFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN- 230
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W +GF+NL G+KM+KS N + + + +IR L + P
Sbjct: 231 PIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTVP 283
Query: 320 IDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
I+ T + + + L+ K W ++ + L+ + A + +L
Sbjct: 284 INLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIESKFAKANFLIMELI 343
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
++ +N + IF + + ++ ++ ++ L+ K +S AD IR
Sbjct: 344 KQ-KENSTIRKIF--------LNLRFNFTKMHLDPESQEKIKNWNKLIMDKNYSEADKIR 394
Query: 433 KQL 435
++L
Sbjct: 395 EEL 397
>gi|145330001|ref|NP_001077986.1| SYCO ARATH; ATP binding / aminoacyl-tRNA ligase/ cysteine-tRNA
ligase/ nucleotide binding [Arabidopsis thaliana]
gi|330253409|gb|AEC08503.1| cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 401
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 140/400 (35%), Positives = 196/400 (49%), Gaps = 66/400 (16%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L CL P+ QPR ++HIPQ+I LI+ I+ +G+AY+ + +I F P YG S RK+
Sbjct: 1 MEQLQCLDPSVQPRVSDHIPQIIDLIKQILDNGYAYKVDGDIYFSVDKFPTYGKLSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
++ + G RV KK+PADF LWK + EP WESPWGRGRPGWHIECSAMS+ YLG
Sbjct: 61 EDNRAGERVAVDTRKKHPADFALWKAAKEGEPFWESPWGRGRPGWHIECSAMSAAYLGYS 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DL+FPHHENEIAQSC A + WIHNGF+ ++ KMSKS GNF TI +
Sbjct: 121 FDIHGGGMDLVFPHHENEIAQSCAACD-SSNISYWIHNGFVTVDSEKMSKSLGNFFTIRQ 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS------- 343
+++ + +RL ++ THYR PI+++ L A + QT
Sbjct: 180 VIDL-------YHPLALRLFLMGTHYRSPINYSDFLLESASERIFYIYQTLHDCESALGE 232
Query: 344 -----------------KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---------- 376
++++ +DL T + A+ + +
Sbjct: 233 KDSTFENGSVPSDTLTSINTFRTEFVASMSDDLLTPVTLAAMSEPLKTINDLIHTRKGKK 292
Query: 377 ------KNHDLLPIFNASAHILGI------EVCKEHLNKNI------SIAIEKLVQERLI 418
L ILG+ EV ++ K + + + VQER
Sbjct: 293 QARREESLKALETTIRDVLTILGLMPTSYSEVLEQLKEKALKRAGLKEEDVLQRVQERTD 352
Query: 419 LLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K K++ +D IRK L G L D T W+
Sbjct: 353 ARKNKEYERSDAIRKDLAKVGIALMDS------PEGTTWR 386
>gi|163840786|ref|YP_001625191.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|310947209|sp|A9WSI9|MSHC_RENSM RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|162954262|gb|ABY23777.1| cysteinyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 423
Score = 198 bits (504), Expect = 1e-48, Method: Composition-based stats.
Identities = 105/396 (26%), Positives = 175/396 (44%), Gaps = 45/396 (11%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++++ + + + +YVCG T YD H+G+A + FD+L R+ R
Sbjct: 20 QLFDSASKTLRAL-PVAAD-ASLYVCGITPYDATHMGHAATYLAFDLLGRVWRDSG--AS 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N+TDIDD ++ERA ++ + + F D T L +AP A
Sbjct: 76 VNYVQNVTDIDDPLLERADRDGVD------WRELAESQIELFRADMTALNVIAPQQYIGA 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN-NEIIFDTSSIPNYGSFSRRKIDEQKMGT------- 177
I ++ ++ +I G AY + ++ FD + + + E
Sbjct: 130 IEAIQWIVPAVEELIAEGFAYRMDSGDVYFD-TVAASVKTPDSSNAGELGAWWLGQISGL 188
Query: 178 -------------RVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMS 223
PE+ K+NP D +LW+ EP W + G GRPGWHIEC+ ++
Sbjct: 189 SPEEMLPVFAERGGDPERDGKRNPLDPLLWRVERAGEPAWPGASLGDGRPGWHIECTVIA 248
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+L F + GGG DL+FPHHE + D A + H G + L+G KMSKS G
Sbjct: 249 RKFLPAPFSVQGGGSDLLFPHHEMGDGHAWALDHT-PLAKHYAHAGMVGLDGEKMSKSRG 307
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS 343
N + ++ L +RL++L HYR +T + L +++ L++W
Sbjct: 308 NLVLVSAL------RAEGVDPMAVRLSILANHYRSDWSWTAELLERSKLRLAQWRAAMEH 361
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ + +AL DL+ +A+ A+ +
Sbjct: 362 TSVGSAAQLVSEIRTALAADLDAPTALNAVDNWVGQ 397
>gi|170782058|ref|YP_001710390.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|310947179|sp|B0RC50|MSHC_CLAMS RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|169156626|emb|CAQ01778.1| putative cysteinyl-tRNA synthetase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 409
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 114/425 (26%), Positives = 175/425 (41%), Gaps = 48/425 (11%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
++T + + + +YVCG T YD HIG+A + FD L R+ + V
Sbjct: 2 FDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD--VA 59
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
YV+N+TD+DD ++ERA + ++ + F D L L P T
Sbjct: 60 YVQNVTDVDDPLLERATATGVD------WRDLAAEQVELFRTDMEALRILPPDSYVGVTE 113
Query: 128 HIPQMIYLIQNIILHGHAYEA---------NNEIIFDTSSIPNY-----GSFSRRKIDEQ 173
+ ++ + ++ G AY ++ FD + G S +D
Sbjct: 114 VVDEVASAVAELVRRGTAYPVATPDAVVAGAQDLYFDVARAGEDGPWALGDESGYDLDTM 173
Query: 174 KM----GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
PE+ K++P D +LW+ EP W+S GRGRPGWHIEC+ ++ L +
Sbjct: 174 AALSAERGGDPERPGKRDPLDPLLWRAERAGEPAWDSVVGRGRPGWHIECAVIALRKLDR 233
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
+ GGG DLIFPHHE + E A ++ H+G + +G KMSKS GN + ++
Sbjct: 234 PVTVQGGGSDLIFPHHEMSAGHAAALTG-EDFACVYAHSGMVAYQGEKMSKSLGNLVLVS 292
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE-------------AEILLSK 336
L IRLA+L HYR ++T + L E A +
Sbjct: 293 RLRAA------GVDPRAIRLALLAQHYRADWEWTDELLAESVARLAAWDAWAAAADASAT 346
Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEV 396
+ G + V L DL+T AI L R +T A +LG+ +
Sbjct: 347 AGADAGEPGELVQLVRERLSEDLDTPGAILLLD--LRVATGVPATPVELAAVDALLGVRL 404
Query: 397 CKEHL 401
Sbjct: 405 GSPAA 409
>gi|323455151|gb|EGB11020.1| hypothetical protein AURANDRAFT_12123 [Aureococcus anophagefferens]
Length = 271
Score = 198 bits (503), Expect = 2e-48, Method: Composition-based stats.
Identities = 101/277 (36%), Positives = 139/277 (50%), Gaps = 18/277 (6%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
+ Y CGPTVYD H+G+AR + D++ R YG V + +TD+DDKII RAR+
Sbjct: 2 KWYACGPTVYDATHLGHARTYVTLDLVRRAATA-YGGSRVDFAMGVTDVDDKIINRAREL 60
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + F +D RL CL P R + H+ ++ + +I+ G Y
Sbjct: 61 GLE------PLELARREEANFFEDLDRLGCLRPDRVLRVSEHVDDIVAYVGDIVDRGFGY 114
Query: 147 EAN-NEIIFDTSSIPNYGSFS--------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ FD + + + + K++ DF LWK +
Sbjct: 115 ATEGGDVWFDVGKLGDAYGAFAEGRGTSKAAAQAALEAEDKASISTKKRDGRDFALWKGA 174
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
E W+SPWG GRPGWHIECSAM+ G D+H GG+DL FPHHENEIAQ A
Sbjct: 175 KAGEISWDSPWGAGRPGWHIECSAMTRATFGDALDLHAGGVDLAFPHHENEIAQWRGASG 234
Query: 258 I--EKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
W+H G L++EGRKMSKS NF+T+ ELL
Sbjct: 235 DLEGVWCPCWLHTGHLHIEGRKMSKSLKNFVTVRELL 271
>gi|116751465|ref|YP_848152.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
MPOB]
gi|116700529|gb|ABK19717.1| cysteinyl-tRNA synthetase, class Ia [Syntrophobacter fumaroxidans
MPOB]
Length = 418
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 99/395 (25%), Positives = 180/395 (45%), Gaps = 28/395 (7%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+++YNT+ R+ F+ + ++M+ CGP++Y H+GN R + DVL R L +
Sbjct: 1 MLQLYNTMSRRKERFEPRNEGAVKMFSCGPSIYGRPHVGNYRSFLWEDVLQRYLEHLGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V ++TD++DK I A++ ++ +T +NT+ F ++ L P+ P
Sbjct: 60 -TVERALSLTDVEDKAISEAQKAGTTVL------ELTDRNTRLFFEEAGALRIKLPSLVP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
R++ + Q + LI ++ G AY ++ FD + +G R + + R ++
Sbjct: 113 RSSTTVEQAVRLILLLLSKGIAYWHEGDVFFDPLQVKGFGRLFRLDMSKWPKAKRRFKQD 172
Query: 184 ----HKKNPADFILWKRSTPMEP-GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+ N DF+LW +P W++P G+GRP W+I+ AM + +LG DI GG+
Sbjct: 173 TYPGRRWNLGDFVLWHGYRQGDPLYWDTPIGKGRPAWNIQDPAMITRHLGYTIDIACGGV 232
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
D ++ HH+ +A E + WIH L ++G+KMSKS GN + +LL+
Sbjct: 233 DNLYRHHDYNLAVIEAISGEE-FSRYWIHGEHLLVDGKKMSKSVGNILYPEDLLKEGAEH 291
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
IR ++ ++R+ I+ T+ R L K + G I +
Sbjct: 292 ------RHIRFYLIYGNHRKTINLTMDRFK---TLSRKLDDLTEVLGEIGCTGEAGGTAP 342
Query: 359 LNTVSAIQALHK-----LARESTKNHDLLPIFNAS 388
+ A + L + + ++ F+
Sbjct: 343 DKSPGAAKKLVDGLLPGFEKHMNDDLNVKGAFDFL 377
>gi|308177410|ref|YP_003916816.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
gi|307744873|emb|CBT75845.1| cysteine--tRNA ligase [Arthrobacter arilaitensis Re117]
Length = 420
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 110/419 (26%), Positives = 183/419 (43%), Gaps = 40/419 (9%)
Query: 3 KKIKIYNTLER--KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++++NT ++T + MYVCG T YD H+G+A + FD++ R R
Sbjct: 17 PTLELFNTATGTQQVTAPADQAAAPASMYVCGITPYDATHMGHAATYVTFDLVQRTWRDA 76
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ V Y +NITD+DD ++ERA N + Q F D L + P
Sbjct: 77 G--RSVAYTQNITDVDDPLLERAEA------TNVDWRELAESQIQLFRDDMEALNVIPPQ 128
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEAN-------NEIIFDTSSIPNY--------GSF 165
+ A I ++ +++ ++ AY ++ FDT N
Sbjct: 129 NYIGAVESIHWLVPVVEQLLEADLAYVVPAGADGVEGDVYFDTMGAQNDAWKLGSVSNYD 188
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSS 224
+ P++ K++ D +LW+ + EP W+ G GRPGWHIECS ++
Sbjct: 189 RETMLRFFAERGGDPQRAGKRDALDPLLWRAAREGEPSWDGGKLGEGRPGWHIECSVIAR 248
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
L F + GGG DLIFPHHE A + D E A ++H G + L+G KMSKS GN
Sbjct: 249 KTLPAPFTVQGGGSDLIFPHHEFSAAHAAAGDHAE-LAQTYVHTGMVGLDGEKMSKSLGN 307
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT---- 340
+ +++L IR +L HYR +T + L A+ ++ W +
Sbjct: 308 LVLVSKLRAA------GVEPVAIRAVLLSQHYRTDWFWTDELLAGAQQRVATWRKALESA 361
Query: 341 -STSKGIIDPAVLSALYNDLNTVSAIQALHKLARE-STKNHDLLPIFNA-SAHILGIEV 396
+ + + NDL+ SA++A+ + A + ++ + +LG+++
Sbjct: 362 SMQDAQQVIAGIREHMANDLDAPSALKAIDQWATQPASSQGEGATALRDGINALLGLKL 420
>gi|148272876|ref|YP_001222437.1| cysteinyl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|310947178|sp|A5CRN7|MSHC_CLAM3 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|147830806|emb|CAN01747.1| cysS2 [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 426
Score = 197 bits (501), Expect = 3e-48, Method: Composition-based stats.
Identities = 113/424 (26%), Positives = 175/424 (41%), Gaps = 45/424 (10%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++T + + + +YVCG T YD HIG+A + FD L R+ +
Sbjct: 20 TLFDTSAGSVRPAECTGDGRVGLYVCGITPYDATHIGHASTYLAFDTLQRVWLDRGYD-- 77
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V YV+N+TD+DD ++ERA + ++ + F D L L P
Sbjct: 78 VAYVQNVTDVDDPLLERATATGVD------WRDLAAEQVELFRTDMEALRILPPDSYVGV 131
Query: 126 TNHIPQMIYLIQNIILHGHAYEA---------NNEIIFDTSSIPNY---------GSFSR 167
T + ++ + ++ G AY ++ FD + G
Sbjct: 132 TEVVDEVAAAVAELVRRGTAYPVATPDAAQPGARDLYFDVARAGADGPWALGDESGYDRD 191
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
PE+ K++P D +LW+ EP W+S GRGRPGWHIEC+ ++ L
Sbjct: 192 TMAALSAERGGDPERPGKRDPLDPLLWRAERADEPAWDSAVGRGRPGWHIECAVIALRKL 251
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
+ + GGG DLIFPHHE + E A ++ H+G + +G KMSKS GN +
Sbjct: 252 DRPVTVQGGGSDLIFPHHEMSAGHAAALTG-EDFACVYAHSGMVAYQGEKMSKSLGNLVL 310
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--- 344
++ L IRLA+L HYR ++T L E+ L+ W +
Sbjct: 311 VSRLRAA------GVDPRAIRLALLAQHYRADWEWTDALLAESVARLAAWDAWAADAAST 364
Query: 345 -------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVC 397
G + V L +DL+T AI L R +T A +LG+ +
Sbjct: 365 DADAGEPGELVQLVRERLADDLDTPGAILLLD--LRVATGVPATPVEVAAVDALLGVALG 422
Query: 398 KEHL 401
Sbjct: 423 SPAA 426
>gi|319777676|ref|YP_004137327.1| cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
gi|238810260|dbj|BAH70050.1| hypothetical protein [Mycoplasma fermentans PG18]
gi|318038751|gb|ADV34950.1| Cysteinyl-tRNA synthetase [Mycoplasma fermentans M64]
Length = 411
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 121/434 (27%), Positives = 203/434 (46%), Gaps = 46/434 (10%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVL---YRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
++YVCGPTVY+ HIGN P++ FD++ R+L + T+V NITDIDDKII RA
Sbjct: 3 KIYVCGPTVYNDLHIGNMVPILTFDLMLKARRVL-----GEKFTFVHNITDIDDKIINRA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+ +N + ++ K T+ ++K L +H + T+++ +I + + +
Sbjct: 58 RE------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNN 111
Query: 144 HAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+AY + + FD N+ ++ + +KK ADF LWK+ T +
Sbjct: 112 NAYIDQEGNVWFDVKKFENHYGQVANLNLDKM--IFEEQNNNKKFEADFALWKK-TNVGI 168
Query: 203 GWESPWGRGRPGWHIECSAMSSH-YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
++SP+ +GRPGWH EC+ + + + K DIHGGG+DL FPHHENE Q +
Sbjct: 169 QFDSPFSKGRPGWHTECAVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYN-QDI 227
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
WI G +N EG KMSKS GN I + L + +++L +L + PI+
Sbjct: 228 TKEWIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPIN 280
Query: 322 FTVQRLTEAEILLSKWPQTST---------------SKGIIDPAVLSALYNDLNTVSAIQ 366
T + + ++L+K+ + + S D + + +
Sbjct: 281 VTNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFNYL- 339
Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
L++ +E K ++ + L + + + N + A E L + + K++
Sbjct: 340 -LNEQIKEFNKTKNIKNA-EIIFNTLKVIHPQLTIKANYNKAFE-LFDQWRCFIDKKEYK 396
Query: 427 SADYIRKQLESKGF 440
AD IRK+L G
Sbjct: 397 QADKIRKKLMKLGV 410
>gi|187631651|sp|Q4A947|SYC_MYCHJ RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|144227739|gb|AAZ44724.2| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
Length = 406
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 117/423 (27%), Positives = 189/423 (44%), Gaps = 37/423 (8%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
I+ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 6 INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 63
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT + T I ++I I+ +
Sbjct: 64 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 117
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
G Y N D ++ K+ DF+LWK++
Sbjct: 118 KKGFTYYNKNN---DLVFDILKIPNYGIISGQKIESLLDKNTKKTKSKNDFVLWKKTQKG 174
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 175 L-FFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN- 232
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W +GF+NL G+KM+KS N + K + +IR L + P
Sbjct: 233 PIAENWFRSGFVNLNGKKMAKSLNNVLLA-------KNFSHKYNPDIIRSIFLSINPTVP 285
Query: 320 IDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
I+ T + + + L+ K W ++ + L+ + A + +L
Sbjct: 286 INLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIEGKFAKANFLIMELI 345
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
++ +N + IF + + + ++ ++ L+ K +S AD IR
Sbjct: 346 KQ-KENSTIRKIF--------LNLRFNFTKMRLDPESQEKIKNWNKLIMDKNYSEADKIR 396
Query: 433 KQL 435
++L
Sbjct: 397 EEL 399
>gi|54020642|ref|YP_116169.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
gi|61216154|sp|Q5ZZP6|SYC_MYCH2 RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|53987815|gb|AAV28016.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae 232]
Length = 404
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 120/419 (28%), Positives = 184/419 (43%), Gaps = 29/419 (6%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
I+ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 4 INKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 61
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT + T I ++I I+ +
Sbjct: 62 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 115
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
G Y N D ++ K+ DF+LWK++
Sbjct: 116 KKGFTYYNKNN---DLVFDILKIPNYGIISGQKIESLLDKNTKKTKSKNDFVLWKKTQKG 172
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 173 L-FFKSFFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN- 230
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W +GF+NL G+KM+KS N + + + +IR L + P
Sbjct: 231 PIAENWFRSGFVNLNGKKMAKSLNNVLLAKDF-------SHKYNPDIIRSIFLSINPTVP 283
Query: 320 IDFTVQRLTEAEILLSKWP---QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
I+ T + + + L+ K+ + +L + L E
Sbjct: 284 INLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIEGKFAKANFLIMELI 343
Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
K + I + L K HLN ++ ++ L+ K +S AD IRK+L
Sbjct: 344 KQKENSTIRKIFLN-LRFNFTKMHLNPES----QEKIKNWNKLIMDKNYSEADKIRKEL 397
>gi|308190282|ref|YP_003923213.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
gi|307625024|gb|ADN69329.1| cysteine--tRNA ligase [Mycoplasma fermentans JER]
Length = 411
Score = 197 bits (500), Expect = 4e-48, Method: Composition-based stats.
Identities = 121/434 (27%), Positives = 202/434 (46%), Gaps = 46/434 (10%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVL---YRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
++YVCGPTVY+ HIGN P++ FD++ R+L + T+V NITDIDDKII RA
Sbjct: 3 KIYVCGPTVYNDLHIGNMVPILTFDLMLKARRVL-----GEKFTFVHNITDIDDKIINRA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+ +N + ++ K T+ ++K L +H + T+++ +I + + +
Sbjct: 58 RE------LNISEKELSQKYTKDYLKLLKTLDVDTISHLEKVTDNMGLIIEYVNKQVKNN 111
Query: 144 HAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+AY + + FD N+ ++ + +KK ADF LWK+ T +
Sbjct: 112 NAYIDQEGNVWFDVKKFENHYGQVANLNLDKM--IFEEQNNNKKFEADFALWKK-TNVGI 168
Query: 203 GWESPWGRGRPGWHIECSAMSSH-YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
++SP+ +GRPGWH EC + + + K DIHGGG+DL FPHHENE Q +
Sbjct: 169 QFDSPFSKGRPGWHTECVVLINKHFKNKGLDIHGGGMDLTFPHHENENIQHFALYN-QDI 227
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
WI G +N EG KMSKS GN I + L + +++L +L + PI+
Sbjct: 228 TKEWIRCGQINYEGEKMSKSLGNVILAKDFL-------KEHDREILKLIILSSKISAPIN 280
Query: 322 FTVQRLTEAEILLSKWPQTST---------------SKGIIDPAVLSALYNDLNTVSAIQ 366
T + + ++L+K+ + + S D + + +
Sbjct: 281 VTNELIENMYVILNKYKKLIFKFFINFKNIDKSKINKNEEFIKIMNSLKIGDFSDFNYL- 339
Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFS 426
L++ +E K ++ + L + + + N + A E L + + K++
Sbjct: 340 -LNEQIKEFNKTKNIKNA-EIIFNTLKVIHPQLTIKANYNKAFE-LFDQWRCFIDKKEYK 396
Query: 427 SADYIRKQLESKGF 440
AD IRK+L G
Sbjct: 397 QADKIRKKLMKLGV 410
>gi|16518968|gb|AAL25085.1| CysS [Wolbachia sp. wMelPop]
Length = 204
Score = 196 bits (499), Expect = 5e-48, Method: Composition-based stats.
Identities = 91/207 (43%), Positives = 133/207 (64%), Gaps = 8/207 (3%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++YNTL +K F ID +++MYVCGPTVYD AHIGNAR ++V+DVL++LL++ YG
Sbjct: 3 RLYNTLTKKKELFTPIDKDHVKMYVCGPTVYDTAHIGNARSVVVYDVLFQLLKFCYG--K 60
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYVRNITDIDDKII A ++ N I I++ T+ F +D + C PTH+P+A
Sbjct: 61 VTYVRNITDIDDKIINAASEK------NSNIESISTYYTKAFHEDMRSINCAEPTHEPKA 114
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
T ++ +I LI++++ GHAYE++ + F+ S YG+ S +K DE G+RV +K
Sbjct: 115 TKNVDYIIKLIEHLLQSGHAYESDKHVYFNIESYHEYGALSGKKTDELVPGSRVEVNENK 174
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGR 212
K+P DF+LWK + ++ S W
Sbjct: 175 KHPGDFVLWKPANDIDYKLSSYWNSPW 201
>gi|116670715|ref|YP_831648.1| cysteinyl-tRNA synthetase [Arthrobacter sp. FB24]
gi|310947173|sp|A0JWX8|MSHC_ARTS2 RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|116610824|gb|ABK03548.1| Cysteine--tRNA ligase [Arthrobacter sp. FB24]
Length = 426
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 117/425 (27%), Positives = 190/425 (44%), Gaps = 52/425 (12%)
Query: 6 KIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+I++T + +D +YVCG T YD H+G+A + FD+L R R G +
Sbjct: 20 RIFDTAVGA---YSTLDATGEQSLYVCGITPYDATHMGHAASYVAFDLLNRAWRD--GGQ 74
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+N+TD+DD ++ERA + + + F D L LAP H
Sbjct: 75 RVAYVQNVTDVDDPLLERATATGVD------WRDLAASQIELFQTDMAALNVLAPDHYVG 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYE-------ANNEIIFDTSSIPNYGSFSRR--------- 168
A IP+++ I+ ++ G AY + ++ +D + + + ++
Sbjct: 129 AVESIPEIVPAIERLLHLGLAYRVTGTPGEPDGDVYYDVEAASKHSAEAKDAWTLGSVSG 188
Query: 169 -----KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAM 222
++ P + K+ D +LW+ + EP W G GRPGWHIEC+ +
Sbjct: 189 LSETEMLELFAERGGDPGRRGKRQALDPLLWRVARDGEPSWAGGELGSGRPGWHIECTVI 248
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
+ YL F + GGG DLIFPHHE + + A + H G + L+G KMSKS
Sbjct: 249 AQKYLPAPFTVQGGGSDLIFPHHEMGAGHAYSLTGV-PLARHFAHAGMVGLDGEKMSKSK 307
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTST 342
GN + +++L + IRLA+L HYR +T +A+ L++W T
Sbjct: 308 GNLVLVSKLRAAGEE------PAAIRLAILAHHYRTDWSWTEAGFAQAKTRLAEWRDALT 361
Query: 343 S-----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH------DLLPIFNASAHI 391
+ + S L NDLN A+ A+ + A + + D + +A +
Sbjct: 362 MAPGESAATLIAEMRSELANDLNAPGALAAVDRWAVAAKQQAGAGSPMDQALVSDAVNAL 421
Query: 392 LGIEV 396
LG+E+
Sbjct: 422 LGVEL 426
>gi|71893989|ref|YP_279435.1| cysteinyl-tRNA synthetase [Mycoplasma hyopneumoniae J]
Length = 401
Score = 195 bits (496), Expect = 1e-47, Method: Composition-based stats.
Identities = 116/423 (27%), Positives = 189/423 (44%), Gaps = 37/423 (8%)
Query: 21 IDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII 80
++ N+ +Y+CGPTVY HIGN R +I+FD ++ L+ + ++ NITDIDDKII
Sbjct: 1 MNKKNLNIYLCGPTVYSDVHIGNLRTIIIFDAIFECLKNKGF--SINFLHNITDIDDKII 58
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+A++ S + +T K T ++ K PT + T I ++I I+ +
Sbjct: 59 EKAQELGISE------AELTEKYTNEYFKILEIFNIKKPTKIVKVTEKIEKIIEYIKLLE 112
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
G Y N D ++ K+ DF+LWK++
Sbjct: 113 KKGFTYYNKNN---DLVFDILKIPNYGIISGQKIESLLDKNTKKTKSKNDFVLWKKTQKG 169
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
++S +G GRPGWH EC+A+ Y K D+HGGG+DLIFPHHENE AQ
Sbjct: 170 L-FFKSLFGLGRPGWHTECAALIYDYFQKKSLDLHGGGVDLIFPHHENENAQHFALTGN- 227
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
A W +GF+NL G+KM+KS N + K + +IR L + P
Sbjct: 228 PIAENWFRSGFVNLNGKKMAKSLNNVLLA-------KNFSHKYNPDIIRSIFLSINPTVP 280
Query: 320 IDFTVQRLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
I+ T + + + L+ K W ++ + L+ + A + +L
Sbjct: 281 INLTEELIKNHKKLIEKYQKICFEWYFDKKNEKTEKVEQVLNLFIEGKFAKANFLIMELI 340
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
++ +N + IF + + + ++ ++ L+ K +S AD IR
Sbjct: 341 KQ-KENSTIRKIF--------LNLRFNFTKMRLDPESQEKIKNWNKLIMDKNYSEADKIR 391
Query: 433 KQL 435
++L
Sbjct: 392 EEL 394
>gi|12862152|dbj|BAB32367.1| unnamed protein product [Mus musculus]
Length = 276
Score = 195 bits (495), Expect = 1e-47, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 44 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 102
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 103 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 156
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + +
Sbjct: 157 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPSATAEPG---DSD 213
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
K++ +DF LWK + P E W SPWG GRPGWHIECS M+
Sbjct: 214 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAR 253
>gi|148690119|gb|EDL22066.1| mCG11180, isoform CRA_b [Mus musculus]
Length = 270
Score = 194 bits (493), Expect = 2e-47, Method: Composition-based stats.
Identities = 78/220 (35%), Positives = 113/220 (51%), Gaps = 11/220 (5%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
T +IPQ+I I+ II HGHAY + FD + + +
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLHARGDKYGKLVNTVPSATAEPG---DSD 207
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
K++ +DF LWK + P E W SPWG GRPGWHIECS M+
Sbjct: 208 KRHSSDFALWKAAKPQEVFWASPWGDGRPGWHIECSTMAR 247
>gi|159037918|ref|YP_001537171.1| cysteinyl-tRNA synthetase [Salinispora arenicola CNS-205]
gi|310947215|sp|A8M264|MSHC_SALAI RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|157916753|gb|ABV98180.1| Cysteine--tRNA ligase [Salinispora arenicola CNS-205]
Length = 412
Score = 194 bits (492), Expect = 3e-47, Method: Composition-based stats.
Identities = 114/410 (27%), Positives = 187/410 (45%), Gaps = 34/410 (8%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ ++++ + + MYVCG T YD H+G+A MI FD++ R+ R +
Sbjct: 19 LMLFDSARQGVAASTPT--GTGTMYVCGITPYDATHLGHAATMITFDLVQRVWRDAGLD- 75
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
VTYV+N+TDIDD ++ERA ++ + ++ + T F +D L + P H
Sbjct: 76 -VTYVQNVTDIDDPLLERAARDG------EDWKVLAMRETALFREDMVALRIIPPAHYVG 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEAN---NEIIFDTSSIPNYGSFSR----RKIDEQKMGT 177
A IP + + ++ AY + ++ FD S+ P +G S + +
Sbjct: 129 AVESIPDIAERVLTLVKEEAAYRIDDGTGDVYFDISAAPRFGYESNLGREQMLKIFPERG 188
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGW-ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
P++ K++P D +LW+ + EP W G GRPGWHIEC+ ++ + LG D+ GG
Sbjct: 189 GDPDRAGKRDPLDPLLWRSARADEPSWPGGGLGPGRPGWHIECAVIALNLLGHRIDVQGG 248
Query: 237 GLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK 296
G DLIFPHHE A + A ++H G + L G KMSKS GN + ++ L
Sbjct: 249 GNDLIFPHHECSAAHAELLTGQSPFAQHYVHAGMIGLAGEKMSKSRGNLVFVSRLRAD-- 306
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA-----V 351
+RLA++ HYR + L A+ L +W + + +
Sbjct: 307 ----RVDPMAVRLALMSGHYRSDRSWNDDLLVTAQKRLDRWRRAAAAPSGPSARTFLAAF 362
Query: 352 LSALYNDLNTVSAIQALHKLARES---TKNHDLLPIF--NASAHILGIEV 396
L +DL++ A+ A + T + P A +LG+ +
Sbjct: 363 RERLADDLDSPGALTLADSWADAALVGTGDDQAAPALFARAVDALLGVRL 412
>gi|328869460|gb|EGG17838.1| cysteinyl-tRNA synthetase [Dictyostelium fasciculatum]
Length = 640
Score = 193 bits (491), Expect = 4e-47, Method: Composition-based stats.
Identities = 124/382 (32%), Positives = 169/382 (44%), Gaps = 38/382 (9%)
Query: 25 NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
NI Y CGPTVYD +H+G+AR + D++ R++ Y V +V +TDIDDKII++++
Sbjct: 120 NISWYSCGPTVYDSSHLGHARTYVTIDIIQRIIND-YFNYNVIHVMGMTDIDDKIIKKSK 178
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ S + Q+FV D L P R T HI +I I I +G
Sbjct: 179 ETGVS------FQELARVKEQEFVDDMASLHVRPPLLITRVTEHIDNIIDFIGKIKENGF 232
Query: 145 AY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS--- 197
AY + N I+FDT + + + T K++ DF LWK +
Sbjct: 233 AYDVQSDNTNSILFDTKQMGDRYGKFVYNDNIISDDTLKINVDAKRDARDFALWKGTYGN 292
Query: 198 ------TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
WESP+G+GRPGWHIECS+M G DIH GG+DL FPHHENEIAQ
Sbjct: 293 DYDKDGKGTIVSWESPFGKGRPGWHIECSSMIESVFGNKLDIHAGGIDLKFPHHENEIAQ 352
Query: 252 SCCADR---------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
++ N +IH G LN++G KMSKS NFITI E L+T
Sbjct: 353 CEANFSPTPNTETGEYDQWINYFIHIGHLNIQGLKMSKSLKNFITIREYLKTNT------ 406
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
A +R LM Y + ID+ + L +K+ L
Sbjct: 407 -ADSLRWICLMNRYYDKIDYNP--NNDYSSLPNKFYGWFGLVEQRLKEPLDMNLERSKFT 463
Query: 363 SAIQALHKLARESTKNHDLLPI 384
A Q + + H L
Sbjct: 464 DAKQYIDAFNTTKNEVHQALSQ 485
>gi|311977536|ref|YP_003986656.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
gi|81999783|sp|Q5UP36|SYC_MIMIV RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|55416788|gb|AAV50438.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
gi|308204215|gb|ADO18016.1| cysteinyl-tRNA synthetase [Acanthamoeba polyphaga mimivirus]
Length = 509
Score = 193 bits (490), Expect = 6e-47, Method: Composition-based stats.
Identities = 125/492 (25%), Positives = 188/492 (38%), Gaps = 74/492 (15%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
+MYVCGPTVY+ AHIG+AR ++ D++ R + + V N+TDIDDKII ++ +
Sbjct: 15 KMYVCGPTVYNDAHIGHARIYVIVDLINRTMNKILNKPT-HLVMNVTDIDDKIIRESKNK 73
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + F ++L P R T I ++ IQ II +G AY
Sbjct: 74 GIT------WLELARLHENSFFDCMSKLNVTRPDSVIRVTESISDIVLYIQQIINNGFAY 127
Query: 147 EANN-EIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEKY---HKKNPADFILWKRSTPME 201
++ + FD+ FS +E++ + K KK+ DF LWK + +
Sbjct: 128 IVSDSSVYFDSIEYKKAGYEFSEIDDEEEQQYESLLSKEIVSQKKHHKDFALWKGRSESD 187
Query: 202 PGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
G+ + G PGWHIECSAM LG DIH GG+DL FPHH NE Q+
Sbjct: 188 VGFNVEFIFDNQTFKSFGVPGWHIECSAMIKKTLGNSIDIHFGGIDLKFPHHYNECLQAN 247
Query: 254 CADR-------------IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+IH G L ++G+KMSKS NF TI E+L+
Sbjct: 248 AYHHPMYNPLHQSDTMIFHTWTREFIHVGHLCIKGQKMSKSLKNFSTIKEMLDKINSNQF 307
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND-- 358
W + + I + +++ ++ L +D
Sbjct: 308 RWLFMSTKWKQQVDFTDGLISIAKELDFTVVNFVNRVSNYPFEVSDVEFNDKETLLHDDF 367
Query: 359 -------------LNTVSAIQALHKLARESTKNHDL-LPIFNASAHI----------LGI 394
+++ L + DL P + I LG
Sbjct: 368 YRIQQRIYSYLTEFKFEMVARSIQHLIGTTNVYLDLPRPNESIVGKIRDYLLDLLDKLGF 427
Query: 395 --EVCKEHLNKNISIAIEKLVQERLILLK-----------MKK-FSSADYIRK-QLESKG 439
V + I + L++ R L + K+ F D R QL G
Sbjct: 428 IYRVGNSSSSHKIKDLMNILIETRSQLRQLTRNPDLSPGIKKQLFDILDRQRNIQLPDIG 487
Query: 440 FILEDYKNPDNG 451
ILED K+
Sbjct: 488 IILEDSKDSSLW 499
>gi|323651396|gb|ADX97544.1| cysteinyl-tRNA synthetase [Moumou virus]
Length = 417
Score = 192 bits (489), Expect = 8e-47, Method: Composition-based stats.
Identities = 114/390 (29%), Positives = 175/390 (44%), Gaps = 39/390 (10%)
Query: 23 PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER 82
+ I+MYVCGPTVY+ AHIG+AR ++ D++ + + + + V NITDIDDKII+
Sbjct: 4 ENLIKMYVCGPTVYNDAHIGHARVYMMVDLINKTM-NRFLNRNTLLVMNITDIDDKIIKA 62
Query: 83 ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
+ S ++ K +F ++L P R + I +I IQNII +
Sbjct: 63 SEINGIS------WQELSKKYEDKFFTSMSQLNIDLPDIIIRVSESIIDIIEYIQNIINN 116
Query: 143 GHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH----KKNPADFILWKRS 197
AY + + FDT S N G +IDE+++ KK+ DF LWK
Sbjct: 117 NFAYITDDGSVYFDTISYINAGYEFSFEIDEEEISYESQISNDIINQKKHKKDFALWKSR 176
Query: 198 TPMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEI 249
T G+++ + G PGWHIECS M +G DIH GG+DL FPHH NE
Sbjct: 177 TKNNVGFDANFSFNGNLIKTYGIPGWHIECSTMIHKTIGNHLDIHFGGIDLKFPHHHNEN 236
Query: 250 AQSCCADRIEK--------TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
Q+C + N ++H G L ++G+KMSKS NF TI+++L +
Sbjct: 237 LQACAYYHPKYHPNDKTKEWTNKFMHIGHLCIKGKKMSKSLKNFSTIDDIL-------QD 289
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNT 361
R + ++ P++F + A+ + + +L+ Y D
Sbjct: 290 LTPNEFRWMFMQHKWQNPMEFNDGVIENAKNMENSIRNLMNRTKNYPFDILNVKYFDKEY 349
Query: 362 VSAIQALHKLARESTKNHDLLPIFNASAHI 391
+ L + + K L F A +
Sbjct: 350 K--LSKLFDIIK--NKIITSLESFEFDAVV 375
>gi|213022498|ref|ZP_03336945.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 151
Score = 191 bits (485), Expect = 2e-46, Method: Composition-based stats.
Identities = 63/154 (40%), Positives = 90/154 (58%), Gaps = 9/154 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ YVRNITDIDDKII+RA + ++ + + + +D L L P +P
Sbjct: 60 -KLKYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDT 156
RAT+HI ++I L + +I GHAY N +++FD
Sbjct: 113 RATHHIQEIIELTRTLIEKGHAYVADNGDVMFDV 146
>gi|111222276|ref|YP_713070.1| cysteinyl-tRNA synthetase [Frankia alni ACN14a]
gi|123338663|sp|Q0RLV2|MSHC_FRAAA RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|111149808|emb|CAJ61502.1| Cysteinyl-tRNA synthetase 2 (Cysteine--tRNA ligase 2) [Frankia alni
ACN14a]
Length = 413
Score = 191 bits (484), Expect = 3e-46, Method: Composition-based stats.
Identities = 103/317 (32%), Positives = 160/317 (50%), Gaps = 18/317 (5%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
+YVCG T YD H+G+A + +D+ R+LR V YV+N+TD+DD ++ERA ++
Sbjct: 12 LYVCGITPYDATHLGHAFTYLTYDLAQRVLRDSG--HKVLYVQNVTDVDDPLLERADRDG 69
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ ++ F +D T L LAP IP ++ ++ ++ G AY
Sbjct: 70 LD------WRDLAAREIALFREDMTALRMLAPDSYVGVVEAIPMIVDMVAELVDRGAAYH 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKM----GTRVPEKYHKKNPADFILWKRSTPMEPG 203
++++ F ++ P +G S E P + KK+P D +LW+ P EP
Sbjct: 124 VDDDLYFSVAAAPAFGEISHLSRAEMLAICAERGGDPGRGGKKDPLDPLLWRARRPGEPS 183
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SP+G GRPGWHIECSA++ H+LG V D+ GGG DL FPHHE A + A A
Sbjct: 184 WPSPFGPGRPGWHIECSAIARHHLGGVVDLQGGGTDLSFPHHECSAAHAEVAAGARPFAR 243
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
++H ++L+G KMSKS GN + + +RLA+L + +++
Sbjct: 244 SYVHTAMVSLDGHKMSKSRGNLEFV------SRLRRAGTDLAALRLALLDHRHTADWEWS 297
Query: 324 VQRLTEAEILLSKWPQT 340
LT+A + +W
Sbjct: 298 ASLLTDAVARVGRWRAA 314
>gi|212695898|ref|ZP_03304026.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
7454]
gi|212677021|gb|EEB36628.1| hypothetical protein ANHYDRO_00431 [Anaerococcus hydrogenalis DSM
7454]
Length = 204
Score = 189 bits (480), Expect = 8e-46, Method: Composition-based stats.
Identities = 75/199 (37%), Positives = 113/199 (56%), Gaps = 13/199 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT RK +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY +
Sbjct: 1 MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLGND- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII +A +E+ S +T K + +++D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKAIKENIST------KEVTDKYIKAYMEDAKDLNLDEEHTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT + +I ++ ++ AYE++ ++ FD S +YG S + I++ + G
Sbjct: 113 KATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172
Query: 184 HK----KNPADFILWKRST 198
+NP DF LWK+
Sbjct: 173 KDKGKKRNPMDFTLWKKQK 191
>gi|47458983|ref|YP_015845.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
gi|61216201|sp|Q6KIE2|SYC_MYCMO RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|47458311|gb|AAT27634.1| cysteinyl-tRNA synthetase [Mycoplasma mobile 163K]
Length = 413
Score = 189 bits (480), Expect = 9e-46, Method: Composition-based stats.
Identities = 122/431 (28%), Positives = 201/431 (46%), Gaps = 44/431 (10%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
+YVCGPTVY+ HIGN +P++ FD+ R + EK ++ N+TDIDDKIIE+A +E
Sbjct: 4 IYVCGPTVYNKVHIGNMKPIMTFDLFLR--GANFIEKQYLFLHNLTDIDDKIIEKASKE- 60
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N I+ + ++K P + + T++I +I I ++ G Y
Sbjct: 61 -----NKTELEISELYSDFYLKMLDEYNINKPDYIEKVTDNINMIIEYIGLLVKKGSGYI 115
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ FDT+ P YGS S +++ G + K NP DF+LWK++ + W+SP
Sbjct: 116 KKGSVYFDTTKYPEYGSISNLNLNKTLDGDDDFKNE-KNNPHDFVLWKKTK-VGITWKSP 173
Query: 208 WGRGRPGWHIECSAMSSH-YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
W GRPGWH ECSA+ +H + DIHGGG+DLIFPH+ENE Q+ + A W+
Sbjct: 174 WSEGRPGWHTECSALINHIFKKDQIDIHGGGIDLIFPHNENENIQNIALHGL-SLAKKWL 232
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G + E KMSKS NFI ++ +E + R +L T + PI +
Sbjct: 233 HVGHIKWENEKMSKSLNNFILADDFIE-------KYGNDTFRTLILNTSFSTPISINEEI 285
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL--------------- 371
L + + +K+ T ++ + T ++ + KL
Sbjct: 286 LESNKKISNKYQVTFNQANLLIMQSKKRQNE-VETQKYLEKIAKLLENFEFSKINFEINL 344
Query: 372 -ARESTK--NHDLLPIFNASAHILGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSS 427
+ + D +LG + ++++ K++ + ++ ++ K F
Sbjct: 345 QIKLFNSVVDLDAANKLVECFKLLGFKFSSQNVSQKDLDLFLKWKIE-----KTNKNFKI 399
Query: 428 ADYIRKQLESK 438
+D + +L+ K
Sbjct: 400 SDKLFLELKEK 410
>gi|262043517|ref|ZP_06016634.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259039133|gb|EEW40287.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 296
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 112/308 (36%), Positives = 155/308 (50%), Gaps = 38/308 (12%)
Query: 175 MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIH 234
GTR+ +K++P DF+LWKR+ P EP W SPWG GRPGWHIECSAM+ HYLG FDIH
Sbjct: 1 AGTRIEVNEYKRDPLDFVLWKRAKPGEPVWPSPWGEGRPGWHIECSAMNCHYLGTHFDIH 60
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DLIFPHHENEIAQS A+ N W+H G + + KMSKS NF T+ ++L
Sbjct: 61 GGGSDLIFPHHENEIAQSTSAND-GPYVNYWLHTGMVTVNKEKMSKSLNNFFTLRDIL-- 117
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GI 346
+ A +R +L HYR+P++++ + + A L++
Sbjct: 118 -----NRFDAQSVRFFLLSAHYRKPLNYSEENIHLARASLTRLYTACQFADGSRSEQHDA 172
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILG-IEVC 397
A+ +D NT A+ L +L RE + L ++LG +E
Sbjct: 173 WRARFCEAMDDDFNTPQALAILFELTREINRLCGTNDDEAAALATTLKDLGNVLGLLEQS 232
Query: 398 KEHLNKNISI-------AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ KN S IEKL+ +R +M K+ AD +R +L +G LED
Sbjct: 233 ADAFLKNRSDLHPAELQLIEKLIHQRGEARRMGKWDKADRLRNELAEQGIDLED------ 286
Query: 451 GQRMTRWK 458
T W+
Sbjct: 287 VGENTSWR 294
>gi|117928653|ref|YP_873204.1| cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
gi|117649116|gb|ABK53218.1| Cysteine--tRNA ligase [Acidothermus cellulolyticus 11B]
Length = 373
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 118/374 (31%), Positives = 174/374 (46%), Gaps = 27/374 (7%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+RMYVCG T YD H+G+A I DVL RLLR + V RN+TD+DD +++ A
Sbjct: 23 GKVRMYVCGVTPYDVTHLGHAATYIWVDVLTRLLRQLGTDVEV--CRNVTDVDDVLLDAA 80
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+ S A+ F +D L PTH+PRA N + ++ L ++ G
Sbjct: 81 RRAGASYDAFAAVQQF------HFEQDMAALGVRPPTHEPRAHNFVRNVVSLAAGLVDAG 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM-GTRVPEKYHKKNPADFILWKRSTPMEP 202
AY N + F + +P S + + P+ K+NP D +W+ S P
Sbjct: 135 KAYVRNGSVYFRGADVPVRAGLSADEARQLAAEFNDEPDDPAKENPFDVAIWRASGEGVP 194
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W SPWG GRPGWH EC+AM+ G DIH GG DL FPHH E A + + A
Sbjct: 195 AWPSPWGPGRPGWHAECAAMAMTVFGPALDIHAGGADLRFPHHAYEAALAEALTGVRPFA 254
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+ G ++ GRKM+KS GN + +++LL +R+ ++ + +P +F
Sbjct: 255 RTWLRVGMVHHGGRKMAKSAGNLVLVSDLLAAHPAAA-------LRMYVVHRRWPQPWEF 307
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIID--PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ L AE + + G D AVL+AL +DL+ +A Q +
Sbjct: 308 DARELQRAEADVDALFTAAARPGRSDGREAVLAALRDDLDVPTAFQV---------AVDE 358
Query: 381 LLPIFNASAHILGI 394
+LG+
Sbjct: 359 GGAAARLLVDVLGL 372
>gi|257056300|ref|YP_003134132.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
gi|256586172|gb|ACU97305.1| cysteinyl-tRNA synthetase [Saccharomonospora viridis DSM 43017]
Length = 382
Score = 189 bits (479), Expect = 1e-45, Method: Composition-based stats.
Identities = 93/303 (30%), Positives = 144/303 (47%), Gaps = 16/303 (5%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+R+Y CG T YD H+G+A + D L R+LR E V RN+TD+DD + A
Sbjct: 29 DRVRIYACGITPYDVTHLGHATTFVWVDTLRRVLRVLGVEPVV--CRNVTDVDDVLDAAA 86
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ A + +F D + L P ++PRA ++ +I L + G
Sbjct: 87 HRAGIRYDHYAAFHEL------RFTDDMSALGVSIPDYEPRAHRYVDTVIRLAAALAESG 140
Query: 144 HAYEANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
AY + + F S+ + + P+ K++P D +W+ + P P
Sbjct: 141 AAYVRDGGVYFRGRSVVARSQLDEGTALRLAREYGGRPDDPAKEDPFDVAVWQPAEPEHP 200
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W+SPWG GRPGWH EC AMS+ G DIH GG DL FPHH A + + A
Sbjct: 201 AWDSPWGPGRPGWHAECVAMSATTFGPCVDIHAGGADLRFPHHAYHAAMAEAFTGVTPYA 260
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W G + ++G KM+KS N + + +LL +++PA V+RLA++ + +P ++
Sbjct: 261 RAWFRVGTVTVDGEKMAKSADNLVLVRDLL-------QTYPAAVVRLAIIDRPWAQPWEY 313
Query: 323 TVQ 325
Sbjct: 314 APG 316
>gi|134099214|ref|YP_001104875.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|291007173|ref|ZP_06565146.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
gi|133911837|emb|CAM01950.1| cysteinyl-tRNA synthetase [Saccharopolyspora erythraea NRRL 2338]
Length = 375
Score = 188 bits (478), Expect = 1e-45, Method: Composition-based stats.
Identities = 99/307 (32%), Positives = 142/307 (46%), Gaps = 16/307 (5%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
R+Y CG T YD H+G+A + DVL R+LR E V RN+TD+DD +++ A
Sbjct: 16 DRARVYACGVTPYDVTHLGHAATFVWVDVLARVLRLLDVEPEV--CRNVTDVDD-VLDAA 72
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + + QF D L P H+PRA ++ +I L ++ G
Sbjct: 73 SER-----AGAYYDRFAAIHQFQFDDDMAALNVRPPEHEPRAHRYVESVIRLACGLLGRG 127
Query: 144 HAYEANNEIIFDTSSIPNYGSFSR-RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
AY + + F +P R + + P+ K++ D +W+ S P P
Sbjct: 128 AAYSSGGSVYFRGHDVPARAGVERLEALRLARQFGGRPDDPAKEDEFDVAVWQASEPGHP 187
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W+SPWG GRPGWH EC AMS LG DIH GG DL FPHH A + I A
Sbjct: 188 SWDSPWGPGRPGWHAECVAMSLSVLGAGVDIHAGGADLRFPHHAYHAAMAEAFTGITPYA 247
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W H G + + G KM+KS GN + + +LL + IRL +L ++ D+
Sbjct: 248 RSWFHVGTVAVAGEKMAKSAGNLVLLGDLLAEH-------SSDTIRLMILDRPWQSSWDY 300
Query: 323 TVQRLTE 329
Q+
Sbjct: 301 LPQQADA 307
>gi|269795398|ref|YP_003314853.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
gi|310947217|sp|D1BHU9|MSHC_SANKS RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|269097583|gb|ACZ22019.1| cysteinyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
Length = 425
Score = 188 bits (478), Expect = 2e-45, Method: Composition-based stats.
Identities = 121/437 (27%), Positives = 185/437 (42%), Gaps = 56/437 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++++ ++ A + + +YVCG T YD HIG+A + FD+L R R +
Sbjct: 20 RVHDSSTGRLV--VAAEGPSASLYVCGITPYDATHIGHAATYVAFDLLGRAWRDAG--QQ 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTY N+TD+DD ++ERA + + T F +D T L + P A
Sbjct: 76 VTYASNVTDVDDPLLERATATGVE------WQDLAVEQTALFAEDMTALGVVPPDVYLGA 129
Query: 126 TNHIPQMIYLIQNIILHGHAYEAN------------NEIIFDTSSIPNYGSFSRRKIDEQ 173
IP + ++ ++ G AY ++ D ++ +G SR
Sbjct: 130 VETIPPVAAAVEELVAAGAAYRVPLEEGAGGDAPALGDVYADVTADSAFGQVSRMDEATM 189
Query: 174 KMGTRVPEKY----HKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHIECSAMSSHYLG 228
K+N D +LW+R P EP WE+ G GRPGWHIEC+ ++ LG
Sbjct: 190 LELFAERGGDPGRAGKRNALDPLLWRRERPGEPAWEAGSLGTGRPGWHIECAVIARAGLG 249
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT---ANIWIHNGFLNLEGRKMSKSNGNF 285
FD+ GGG DL+FPHHE + + + A +H G + +G KMSKS GN
Sbjct: 250 LPFDVQGGGSDLLFPHHEMSTSHARLIGDGDVHGVGAATHVHAGLVGYQGEKMSKSRGNL 309
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
+ + + IRLA+L HYR ++T LTE W + G
Sbjct: 310 VFV------SRLRAEGVEPMAIRLALLAHHYRSDWEWTDASLTEGVARFETWRSAVSGNG 363
Query: 346 IIDPA-----VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEH 400
D V +AL +DL+ A+ A+ + A + G E E
Sbjct: 364 GPDADATLAEVRAALADDLDAPRALAAVDRWAE---------------LSLAGTEKPVEG 408
Query: 401 LNKNISIAIEKLVQERL 417
+S A+ L+ RL
Sbjct: 409 APGVVSRAVNALLGVRL 425
>gi|90077312|dbj|BAE88336.1| unnamed protein product [Macaca fascicularis]
Length = 451
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 125/462 (27%), Positives = 190/462 (41%), Gaps = 95/462 (20%)
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
V ITD+DDKII+RA + +N + + + S + F +D L L PT R T
Sbjct: 1 MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54
Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ+I I+ II GHAY + FD S + + P K+
Sbjct: 55 NIPQIISFIEGIIARGHAYSTAKGNVYFDLKSRGDKYGKLVGVVPGP---VGEPADSDKR 111
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPHHE
Sbjct: 112 HASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHE 171
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQ + E+ N ++H+G L++ + KMSKS N+ITI + L +++
Sbjct: 172 NEIAQCEVFHQCEQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL-------KTFSP 224
Query: 305 PVIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQTST 342
V R L + YR ID++ + + +
Sbjct: 225 DVFRFFCLRSSYRSAIDYSDSAMLHAQQQLLALGSFLEDARAYMKGQLACGSVREVMLWE 284
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLPIF 385
AV AL +D +T + A+ LA + ++ F
Sbjct: 285 RLASTRSAVKEALADDFDTPRVVDAILGLAHHGNRQLRAASKEPGVPRSPAVFGAIISFF 344
Query: 386 NASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA----------- 428
+GI + + +E+LV+ R + + F+ A
Sbjct: 345 EQFFETVGISLGNQQCVSGDGSEATLRGVVEELVRFRQKVRQ---FALAKAEATVEARRQ 401
Query: 429 ------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + + W+
Sbjct: 402 QLLERQPLLEACDTLRQDLTAHGISIKDRNSTTS-----TWE 438
>gi|331698452|ref|YP_004334691.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
gi|326953141|gb|AEA26838.1| Cysteine--tRNA ligase [Pseudonocardia dioxanivorans CB1190]
Length = 365
Score = 188 bits (477), Expect = 2e-45, Method: Composition-based stats.
Identities = 104/375 (27%), Positives = 171/375 (45%), Gaps = 28/375 (7%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
RMYVCG T YD H+G+A + DV R+LR+ + V RN+TD+DD
Sbjct: 13 GRARMYVCGITPYDTTHLGHAATFVWADVAARVLRHVGVDVDV--CRNVTDVDD------ 64
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + + +F +D L PT++PRA H+ Q++ L + ++ G
Sbjct: 65 VLDAAAARAGARYDSFAAVQQFRFERDMAALGVRRPTYEPRAHVHVAQVVELAEALLERG 124
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
AY + + F + + + + + +PAD ++W+ + EP
Sbjct: 125 AAYHRDGTVWFRGAGVRERAGLAADEAAALADEFGDRRDDGRDDPADVVIWRVAGHGEPA 184
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SPWG GRPGWH EC+AMS LG D+H GG DL +PHH E A + + A
Sbjct: 185 WPSPWGEGRPGWHAECAAMSLTTLGPALDLHVGGADLRYPHHAYEAAMAEAVTGVTPFAR 244
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
W+H G + ++GRKM+KS GN + ++++L + PA +RL ++ + + D+
Sbjct: 245 AWLHVGTVRIDGRKMAKSAGNLVLVSDVLADR-------PAAALRLLLVDRPWAQTWDYR 297
Query: 324 VQRLTEAEILLSKWPQTSTS----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ L AE L ++ + V +AL +DL+ A+ + +
Sbjct: 298 DEDLRAAETRLEALYAAASHGVTENPVASAEVTAALLDDLDVPRALAVAQEAGGTAA--- 354
Query: 380 DLLPIFNASAHILGI 394
+LG+
Sbjct: 355 ------RQVLSVLGL 363
>gi|283458070|ref|YP_003362681.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
gi|310947212|sp|D2NT85|MSHC_ROTMD RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|283134096|dbj|BAI64861.1| cysteinyl-tRNA synthetase [Rothia mucilaginosa DY-18]
Length = 453
Score = 187 bits (476), Expect = 2e-45, Method: Composition-based stats.
Identities = 94/368 (25%), Positives = 154/368 (41%), Gaps = 45/368 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T +I + Q + +YVCG T YD H+G+A + FD+L+R
Sbjct: 35 RIFDTAAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRAWLDAG--VP 90
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYV+N+TD+DD ++ERA N + T+ F D L + P H
Sbjct: 91 VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 144
Query: 126 TNHIPQMIYLIQNIILHGHAY------------EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
I + LI+++ G AY + ++ D ++ + +
Sbjct: 145 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 204
Query: 174 KMGTRVPEKYH---------------KKNPADFILWKRSTPMEPGWES-PWGRGRPGWHI 217
+ K++ D +LW+ EP W++ G GRPGWHI
Sbjct: 205 GEVCHLTRDEMLEIFAERGGDPNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGWHI 264
Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
EC+ ++ ++ + GG DL FPHH+ S A + H G + L+G K
Sbjct: 265 ECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDGHK 323
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS GN + ++ L + A +RLA++ HYR +T + L A+ L +
Sbjct: 324 MSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLEHAKARLDTY 377
Query: 338 PQTSTSKG 345
+
Sbjct: 378 RHAVSVAE 385
>gi|294155832|ref|YP_003560216.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
gi|291600502|gb|ADE19998.1| cysteine--tRNA ligase [Mycoplasma crocodyli MP145]
Length = 408
Score = 187 bits (475), Expect = 3e-45, Method: Composition-based stats.
Identities = 125/426 (29%), Positives = 193/426 (45%), Gaps = 39/426 (9%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
++YVCGPTVY+ HIGN RP++ FD++ R R + + + NITDIDDKII +A +E
Sbjct: 3 KIYVCGPTVYNDLHIGNIRPILNFDLMLRAYRNTGKDFILIH--NITDIDDKIINKALEE 60
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + I+ + Q++K L +H +++ M I+NI + AY
Sbjct: 61 NVDELV------ISQRYANQYIKLLQELNIKTISHLEYVRDNLDVMKKYIENIRQNKDAY 114
Query: 147 -EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ ++FD + EQ + + E KK+P+DF LWK+ T + +
Sbjct: 115 LDKEGNVLFDVEKNKKAYGTVSNQKIEQMVFEQ--ENSTKKHPSDFSLWKK-TNVGVKFN 171
Query: 206 SPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
S +G GRPGWH EC A+ + G+ DIHGGG+DL FPHHENE Q + + A
Sbjct: 172 SQFGEGRPGWHTECCAIIDKHFPGQGVDIHGGGIDLKFPHHENENIQHYSLYK-KPLAKN 230
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
WIH G +N G KMSKS GN I + LE R+ +L+ P++ +
Sbjct: 231 WIHCGHINYNGEKMSKSLGNVILAKDFLEEHGS-------NTFRMILLLADITSPMNLSD 283
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV-----------SAIQALHKLAR 373
+ ++ + +K Q + ++D + L +L ++ L +
Sbjct: 284 SLIENSKKIYAKIKQVAFKNFLLDANKIIDLNEELYIELNSLVANLKNSDFNFNVNNLLK 343
Query: 374 ESTKNHD--LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ KN D L LG + + + Q LL K F AD +
Sbjct: 344 QLNKNFDSKLATTLVKVFEDLGFNFEQYTFKDF-----KIIYQNWQNLLLNKTFDEADKL 398
Query: 432 RKQLES 437
RK L
Sbjct: 399 RKILIK 404
>gi|255327118|ref|ZP_05368193.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rothia mucilaginosa ATCC 25296]
gi|255295736|gb|EET75078.1| cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Rothia mucilaginosa ATCC 25296]
Length = 438
Score = 186 bits (473), Expect = 5e-45, Method: Composition-based stats.
Identities = 100/397 (25%), Positives = 162/397 (40%), Gaps = 48/397 (12%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+I++T +I + Q + +YVCG T YD H+G+A + FD+L+R
Sbjct: 20 RIFDTSAGEIVQVQ--EDKAASLYVCGITPYDATHMGHASTYVAFDLLHRAWLDAG--VP 75
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
VTYV+N+TD+DD ++ERA N + T+ F D L + P H
Sbjct: 76 VTYVQNVTDVDDPLLERA------TATNVDWRELAEDQTELFRTDMKALNVIPPAHYVGV 129
Query: 126 TNHIPQMIYLIQNIILHGHAY------------EANNEIIFDTSSIPN-----------Y 162
I + LI+++ G AY + ++ D ++
Sbjct: 130 VESIEWLFPLIEDLFRRGLAYRVPGFTDEQGVVHPDGDVYLDLKAVRELPANAEGYSWAP 189
Query: 163 GSFSRRKIDEQKMGTRVPEKY----HKKNPADFILWKRSTPMEPGWES-PWGRGRPGWHI 217
G DE K++ D +LW+ EP W++ G GRPGWHI
Sbjct: 190 GEVCHLSRDEMLEIFAERGGDPNRAGKRDALDPLLWRVEREGEPSWDAGELGAGRPGWHI 249
Query: 218 ECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
EC+ ++ ++ + GG DL FPHH+ S A + H G + L+G K
Sbjct: 250 ECTMIARRFVDGSLTVQAGGNDLTFPHHDLGAGHSWAVS-ARPHAKHYAHTGMVGLDGHK 308
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS GN + ++ L + A +RLA++ HYR +T + L ++
Sbjct: 309 MSKSRGNLVLVSRLRAAGE------DANAVRLAIMGQHYRSDWFWTDELLE---HAKARL 359
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ + + S D V + A+ + E
Sbjct: 360 DTYRHAVSVAEGREGSEGVTDEAAVELLAAVREALGE 396
>gi|269956278|ref|YP_003326067.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Xylanimonas cellulosilytica DSM 15894]
gi|310947227|sp|D1BS17|MSHC_XYLCX RecName: Full=L-cysteine:1D-myo-inositol
2-amino-2-deoxy-alpha-D-glucopyranoside ligase;
Short=L-Cys:GlcN-Ins ligase; AltName: Full=Mycothiol
ligase; Short=MSH ligase
gi|269304959|gb|ACZ30509.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha- D-glucopyranoside
ligase [Xylanimonas cellulosilytica DSM 15894]
Length = 404
Score = 186 bits (472), Expect = 7e-45, Method: Composition-based stats.
Identities = 113/400 (28%), Positives = 176/400 (44%), Gaps = 28/400 (7%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
++++ + + E + +Y CG T YD H+G+A + FD+L R K V
Sbjct: 23 VHDSTTQSLVEAAP--GATATLYACGITPYDATHLGHANTYLAFDLLQRAWLDAG--KTV 78
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y N+TD+DD ++ERA + + T+ + D T L L P A
Sbjct: 79 VYTSNVTDVDDPLLERATATGVD------WRELAREQTELYRTDMTALRMLPPATWTGAV 132
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV----PEK 182
IP ++ + ++ G AY + ++ D S+ P +G + + P++
Sbjct: 133 ESIPAVVEAVTALLDAGAAYRVDADVYADLSADPGFGRVAGLDDATMRALFAERGGDPDR 192
Query: 183 YHKKNPADFILWKRSTPMEPGWE-SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
KK+P D LW+ P EP W+ G GRPGWHIEC+ ++ LG FD+ GGG DL+
Sbjct: 193 PGKKHPLDPALWRGEQPGEPSWDGGKLGPGRPGWHIECAVIARDGLGLPFDVQGGGADLL 252
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
FPHHE + + A + +H G L +G KMSKS GN + ++ LL
Sbjct: 253 FPHHEMSTSHARLLAGG--AARVHVHAGLLAYDGHKMSKSRGNLVFVSRLLAA------G 304
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT----STSKGIIDPAVLSALYN 357
+RLA+L HYRE ++T L A+ L W D + +
Sbjct: 305 TDPMTVRLALLAHHYREEWEWTDVELRTAQRRLDTWTSAILSTHDDGEPADTVLDAVRAA 364
Query: 358 DLNTVSAIQALHKLAR-ESTKNHDLLPIFNASAHILGIEV 396
+ A AL + R + D + +LGIE+
Sbjct: 365 LAADLDAPAALAAVDRWAANPGGDAGVVVATVDALLGIEL 404
>gi|225467252|ref|XP_002268960.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 408
Score = 186 bits (472), Expect = 8e-45, Method: Composition-based stats.
Identities = 139/406 (34%), Positives = 194/406 (47%), Gaps = 72/406 (17%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
T L CL+PTHQPR ++H+ Q+ +I II + AY + ++ F PNYG S RK+
Sbjct: 1 MTDLHCLSPTHQPRVSDHMDQIKDMITQIINNDCAYTIDGDVYFAVDKSPNYGRLSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ + G RV K+NPADF LWK + P EP W+SPWG GRPGWHIECSAMS+HYL
Sbjct: 61 ENNRAGERVAVDSRKRNPADFALWKAAKPGEPSWDSPWGPGRPGWHIECSAMSAHYLTFK 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG+DLIFPHHENEIAQSC A E + W+HNG + KMSKS GNF TI +
Sbjct: 121 FDIHGGGIDLIFPHHENEIAQSCAAC-QESNVSYWMHNGHVTNNNEKMSKSLGNFFTIRQ 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI---- 346
+ + + +R +L THYR P+++++ +L A + QT
Sbjct: 180 ITDL-------YHPLALRYFLLGTHYRSPVNYSIAQLEIASEAVFYIYQTLRDCEDTLSL 232
Query: 347 ---------------------IDPAVLSALYNDLNTVSAI-QALHKLARESTKNHDLL-- 382
+ + + +DL+T + +L + R ++L
Sbjct: 233 FQEVNGRNVCIAPAAQDCIRTLQTDFQTKMSDDLSTPHILNASLQEALRFINSCLNMLKK 292
Query: 383 -----------------PIFNASAHILGI-------EVCKEHLNKNI------SIAIEKL 412
+LG+ EV ++ K + + L
Sbjct: 293 QQKQQQLSAVESLTKLGKEVKGVLSVLGLLSTLAYSEVLQQLKGKALKRAGMIEDDVLHL 352
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
++ER + K K FS D IR L SKG L D + T W+
Sbjct: 353 IEERALARKNKDFSKGDQIRADLASKGIALMD------VGKETIWR 392
>gi|119715257|ref|YP_922222.1| cysteine--tRNA ligase [Nocardioides sp. JS614]
gi|119535918|gb|ABL80535.1| Cysteine--tRNA ligase [Nocardioides sp. JS614]
Length = 390
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 110/345 (31%), Positives = 166/345 (48%), Gaps = 17/345 (4%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+ R+YVCG T YD H+G+A + D+L +L V+ RN+TD+DD ++E A
Sbjct: 41 GSARVYVCGITPYDVTHLGHASTFVWADLLASVL--DGTGVDVSTCRNVTDVDDVLLEAA 98
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R + F + L P HQPRA +++ ++ L Q ++ G
Sbjct: 99 RLRGS------HFDELAVTQEADFDRSMRELRVATPAHQPRARHYVDAVVQLAQALLDAG 152
Query: 144 HAYEANNEIIFDTSSIP-NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
AYE + + F + G R + + P + K + D +W+ S +P
Sbjct: 153 AAYERDGTVWFRGRDVVARTGLERDRALALAEAYGDQPGEPAKDDSFDVAVWRPSADQQP 212
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W SPWG GRPGWH EC+AM+ G D+ GG DL+FPHH ++A + + A
Sbjct: 213 AWASPWGWGRPGWHAECAAMALAVHGPSVDVLVGGDDLVFPHHAYQVAMAEAVSGVAPFA 272
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
+H G + + G+KM+KS+GN + +++LLE P +RL +L Y EP DF
Sbjct: 273 RAQLHVGEVRIGGQKMAKSSGNLVLVDDLLE-------HLPPAALRLHLLHRRYAEPWDF 325
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPA-VLSALYNDLNTVSAIQ 366
+L EAE LL + G DP L AL DL+ +A+
Sbjct: 326 EAAQLAEAEQLLESLYAAAGRAGAGDPTAPLEALRTDLDVPTAVA 370
>gi|260825281|ref|XP_002607595.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
gi|229292943|gb|EEN63605.1| hypothetical protein BRAFLDRAFT_119738 [Branchiostoma floridae]
Length = 636
Score = 186 bits (471), Expect = 8e-45, Method: Composition-based stats.
Identities = 132/545 (24%), Positives = 201/545 (36%), Gaps = 146/545 (26%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---------------- 84
+G+AR I FD+L R+++ Y V Y NITDIDDKII+RAR
Sbjct: 1 MGHARSYISFDILRRVMKD-YFNYDVLYAMNITDIDDKIIKRARQNYLLEQYMDKKPSRK 59
Query: 85 -------------QEHPSIPINDAISIITSKNTQQFVK---------------------- 109
+E + + + T + +
Sbjct: 60 QLLDDTQTAMKPYREKLDRETDPDKKAMLQRITNKVEETVAKLEQIAENSPDASKEDELK 119
Query: 110 ------------DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ L R + +IP++I +Q II G+ YE+N + FDT+
Sbjct: 120 KALVGDARDPLSEWLDSMVLPADVLTRVSEYIPEVIEYVQTIIDKGYGYESNKSVYFDTT 179
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADFILWKRSTPMEPGW 204
S K+ + G K++ DF LWK S P EP W
Sbjct: 180 KFDGADSHFYAKLVPEAFGDSKAMLEGEGDLSISQDRLSEKRSTTDFALWKASKPGEPSW 239
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+SPWG GRPGWHIECS M+S LG DIH GG DL FPHH+NEIAQ+ +
Sbjct: 240 DSPWGMGRPGWHIECSVMASSILGGSLDIHTGGYDLKFPHHDNEIAQAEAYYDNDHWVRY 299
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
++H+G L +EG KMSKS NFITI E L + + +RL L+ +++ +D++
Sbjct: 300 FLHSGHLTIEGCKMSKSLKNFITIQEALS-------KYSSRQLRLGFLLHSWKDTLDYSS 352
Query: 325 QRLTEAEILLSKWPQTSTSKGII-------------------------DPAVLSALYNDL 359
+ A + + + V AL +++
Sbjct: 353 DTMGTAVKYEKMINEFFLTVKDVLRTDAPPFLKWDKAELQLAESFQQRKEGVHQALCDNI 412
Query: 360 NTVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEVCKE---- 399
+T + + + +L +S D+ I G +E
Sbjct: 413 DTRATMDQMRELVSDSNVYLKEKRDARQQPDHALLRDIAAYLTRMLKIFGAIEGEELIGF 472
Query: 400 -----HLNKNISIAI--------EKLVQERLILLKMK---KFSSADYIRKQ-LESKGFIL 442
N+ + E + R + + K D +R L G L
Sbjct: 473 PVGGTSQAANLEETVMPYLSTMAEFRDKVRQVARQEKAKEILQLCDGLRDDVLPQLGVRL 532
Query: 443 EDYKN 447
ED++
Sbjct: 533 EDHEG 537
>gi|163785696|ref|ZP_02180221.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159879035|gb|EDP73014.1| cysteinyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 382
Score = 186 bits (471), Expect = 9e-45, Method: Composition-based stats.
Identities = 131/396 (33%), Positives = 185/396 (46%), Gaps = 65/396 (16%)
Query: 78 KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
KII RA++E ++I+ + + + +D +PR T HIP +I LIQ
Sbjct: 1 KIINRAKKECL------PFTVISDRYIKSYFEDAENFKIEPADVEPRVTTHIPDIIDLIQ 54
Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+I G+AYE ++ F +YG S+R +DE G RV KK+P DF LWK S
Sbjct: 55 KLIEKGYAYEVEGDVYFSVRKFKDYGKLSKRSVDELIAGARVEPGEKKKDPLDFALWKAS 114
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
EP W+SPWG+GRPGWH EC+AM +LG+ DIHGGGLDL FPHHENE+AQ+
Sbjct: 115 KAGEPAWDSPWGKGRPGWHTECTAMIFKHLGQTIDIHGGGLDLTFPHHENELAQAEALS- 173
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ A WIHNG + + G+KMSKS GN+IT+ E+ + + ++RL +L HYR
Sbjct: 174 EKPFAKYWIHNGLVTVNGQKMSKSLGNYITLKEI-------YQKYHPDILRLLVLSVHYR 226
Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIID--------------------PAVLSALYN 357
P+DF+ ++ E + + I++ A+ N
Sbjct: 227 SPLDFSWDKMEEMKKAYERLKNAIDEYEILEKLPENPDFEEDLYGKTAKAQQDFYRAMSN 286
Query: 358 DLNTVSAIQALHKLARESTKNHD-----------LLPIFNASA--------HILG----- 393
D NT A AL+ L RE D L + +A I G
Sbjct: 287 DFNTPEAFAALYGLVREMNILKDKAVKEGGISKKALSSYKEAADALYSITKDIFGFFDSL 346
Query: 394 ---IEVCK----EHLNKNISIAIEKLVQERLILLKM 422
IE+ K + K I L++ R K
Sbjct: 347 QPCIELPKYETIKQEEKVDEELINMLIEIRNKARKE 382
>gi|325845931|ref|ZP_08169129.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481837|gb|EGC84869.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 210
Score = 185 bits (469), Expect = 1e-44, Method: Composition-based stats.
Identities = 69/190 (36%), Positives = 105/190 (55%), Gaps = 9/190 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYNT RK +F+ ID + +RMYVCGPTVYD+ HIGNARP+++FD + R LRY +
Sbjct: 1 MKIYNTFTRKKEDFKTIDENKVRMYVCGPTVYDYMHIGNARPLVIFDTMRRYLRYLGND- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQP 123
V YV N TD+DDKII +A +E+ S +T K + ++ D L T P
Sbjct: 60 -VKYVVNFTDVDDKIINKAIKENIST------KEVTDKYIKAYMDDAKDLNLDEEHTIHP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+AT + +I ++ ++ AYE++ ++ FD S +YG S + I++ + G
Sbjct: 113 KATETMDDIIDFVKELVDKDCAYESDGDVYFDISKAKDYGHLSGKNIEDLREGASNRLDD 172
Query: 184 HKKNPADFIL 193
K +
Sbjct: 173 KDKGKKRNPM 182
>gi|289803124|ref|ZP_06533753.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 294
Score = 184 bits (468), Expect = 2e-44, Method: Composition-based stats.
Identities = 102/312 (32%), Positives = 146/312 (46%), Gaps = 61/312 (19%)
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K+NP DF+LWK S EP W SPWG GRPGWHIECSAM+ LG FDIHGGG DL+FPH
Sbjct: 8 KRNPMDFVLWKMSKEGEPSWPSPWGEGRPGWHIECSAMNCKQLGNHFDIHGGGSDLMFPH 67
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
HENEIAQS CA E N W+H+G + ++ KMSKS GNF T+ ++L + + A
Sbjct: 68 HENEIAQSTCAHDGE-YVNYWMHSGMVMVDREKMSKSLGNFFTVRDVL-------KYYDA 119
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSAL 355
+R ++ HYR ++++ + L +A L + + + A+
Sbjct: 120 ETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAM 179
Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE-------- 399
+D NT A L +ARE + + + + +LG+ +
Sbjct: 180 NDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGA 239
Query: 400 HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKNP 448
+ IE L+Q+RL + +L G ILED
Sbjct: 240 QADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED---- 284
Query: 449 DNGQRMTRWKQK 460
G + T W++K
Sbjct: 285 --GPQGTTWRRK 294
>gi|255023445|ref|ZP_05295431.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
Length = 147
Score = 184 bits (467), Expect = 3e-44, Method: Composition-based stats.
Identities = 55/155 (35%), Positives = 87/155 (56%), Gaps = 8/155 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ V +V N TD+DDK+I A + ++P + + + D +L T
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFDDVDQLNVAKATVN 112
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
PR T ++ ++I LI +I G+AYE+ ++ F
Sbjct: 113 PRVTENMDEIIQLISTLIEKGYAYESAGDVYFRNE 147
>gi|308081958|ref|NP_001183395.1| hypothetical protein LOC100501811 [Zea mays]
gi|238011202|gb|ACR36636.1| unknown [Zea mays]
Length = 178
Score = 184 bits (466), Expect = 3e-44, Method: Composition-based stats.
Identities = 58/140 (41%), Positives = 84/140 (60%), Gaps = 8/140 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ ++N+L ++ FQ + MYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 31 PQLVLFNSLTKREEPFQPRVEGKVGMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 90
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
E V YVRN TDIDDKII+RA + + ++ ++S+ +F+ D T L CL PT +
Sbjct: 91 E--VEYVRNFTDIDDKIIKRANERG------ETVTSLSSRFINEFLLDMTELQCLPPTCE 142
Query: 123 PRATNHIPQMIYLIQNIILH 142
PR T HI +I LI +
Sbjct: 143 PRVTEHIEHIIELITKVQYC 162
>gi|332670290|ref|YP_004453298.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Cellulomonas fimi ATCC 484]
gi|332339328|gb|AEE45911.1| cysteine/1-D-myo-inosityl 2-amino-2-deoxy-alpha-D-glucopyranoside
ligase [Cellulomonas fimi ATCC 484]
Length = 418
Score = 182 bits (462), Expect = 9e-44, Method: Composition-based stats.
Identities = 109/413 (26%), Positives = 170/413 (41%), Gaps = 42/413 (10%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
+T ++ +YVCG T YD H+G+A + FDVL R R + V Y
Sbjct: 23 DTSTGQLVVAAP--GPTATLYVCGITPYDATHLGHAATYVAFDVLGRAWRDAG--QQVRY 78
Query: 69 VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNH 128
N+TD+DD ++ERA + ++ + +D T L + P
Sbjct: 79 ASNVTDVDDPLLERATATGVE------WQDLAAEQVALYAEDMTALGVVPPDAWTGVVES 132
Query: 129 ---------IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM---- 175
+ + ++ D S+ +G+ +
Sbjct: 133 VPAVVDAVAALVAAGAAYTVDTPDALGDGPGDVYADLSADGAFGTVAGLDPATMLALSAE 192
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIH 234
P + K++P D +LW+R EP W+ GRGRPGWHIEC+ ++ LG FD+
Sbjct: 193 RGGDPGRPGKRSPLDPLLWRRERAGEPAWDGGTLGRGRPGWHIECAVIARDSLGLPFDVE 252
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
GGG DL FPHHE + + D A + +H G + L+G KMSKS GN + ++ L E
Sbjct: 253 GGGSDLQFPHHEMSTSHARLLDAGH-GARVHVHAGMVGLDGEKMSKSRGNLVLVSRLRED 311
Query: 295 KKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--- 351
IRLA+L Y E D+T L EA L W + + G D
Sbjct: 312 ------GVDPMAIRLAILAHRYSEDWDWTDAGLKEAVERLGGWRRALSGNGGPDATATIA 365
Query: 352 --LSALYNDLNTVSAIQALHKLARESTKNHDL------LPIFNASAHILGIEV 396
+A+ +DL+T A+ + A + + + A +LG+ +
Sbjct: 366 ALRAAVADDLDTPRALDVVDDWALAALRGDAEPVEGAPGLVARAVDALLGVRL 418
>gi|313678172|ref|YP_004055912.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
gi|312950555|gb|ADR25150.1| cysteine--tRNA ligase [Mycoplasma bovis PG45]
Length = 413
Score = 181 bits (460), Expect = 2e-43, Method: Composition-based stats.
Identities = 116/426 (27%), Positives = 187/426 (43%), Gaps = 34/426 (7%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
++YVCGPTVY+ HIGN RP++ FD + + R E +V NITD+DDKII +A Q
Sbjct: 3 KIYVCGPTVYNDPHIGNLRPIVTFDFMLKAYRELGKEF--KFVHNITDVDDKIINKAIQ- 59
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ S + S + + K +L + + T++I + I + G+AY
Sbjct: 60 -----LDIKESEVASYYFKSYQKILRKLNVNTISKIEKVTHNISYINKYINRLYESGNAY 114
Query: 147 EA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ N + FD + + + + HKK ADF LWK T + +
Sbjct: 115 KDVNGNVWFDVLKNKDSYGVVSNQNLDNMVFEENSL--HKKFKADFALWKS-TAVGIKFY 171
Query: 206 SPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
S +G GRPGWH EC A+ + G DIHGGG+DL FPHHENE Q +
Sbjct: 172 SNFGAGRPGWHTECCALIDKHFGQNGVDIHGGGMDLTFPHHENENIQHYALYG-KPLTKE 230
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
WI G LNL+G KMSKS GN I N+ + ++ A +++L I+ T
Sbjct: 231 WIRCGQLNLDGEKMSKSVGNVILANDFI-------NAYGATILKLIFFNAKVSANINITK 283
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL------------HKLA 372
+ + E + K+ + + + + + ++AL +L
Sbjct: 284 ELIENMEAIEIKYKKVLFKIFTLFKDKIISNEAYEKSEIVLKALESVSKLEFSDFNFQLN 343
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYI 431
E + + + A + + + L S + + + +K + SAD +
Sbjct: 344 NEIRQFNKSPSLERAKDIFFILSLFHKELTSINSYKKYLDIYDKWHYFIGIKDYKSADKL 403
Query: 432 RKQLES 437
R++L
Sbjct: 404 REKLIK 409
>gi|15828648|ref|NP_326008.1| cysteinyl-tRNA synthetase (cysteine--tRNA ligase) [Mycoplasma
pulmonis UAB CTIP]
gi|61216356|sp|Q98R33|SYC_MYCPU RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|14089590|emb|CAC13350.1| CYSTEINYL-TRNA SYNTHETASE (CYSTEINE--TRNA LIGASE) [Mycoplasma
pulmonis]
Length = 596
Score = 181 bits (459), Expect = 2e-43, Method: Composition-based stats.
Identities = 110/423 (26%), Positives = 176/423 (41%), Gaps = 32/423 (7%)
Query: 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
+ ++Y+CGPTVYD HIGN R ++V D++ R +Y K +V NITDIDDKIIE
Sbjct: 203 NEKIFKVYLCGPTVYDEVHIGNMRSVVVVDLIVRAQKYLG--KKTLFVHNITDIDDKIIE 260
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
R+ Q S I+ K +++ K + + P+ T++I ++ I ++
Sbjct: 261 RSIQSKISENK------ISEKYFREYKKVLKKYRIKSIDKMPKVTDNIDSIVKFINSLDK 314
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
G+ + ++ +FD S I NYG + KK +F LWK +T
Sbjct: 315 KGYVIQKDDGFVFDVSKIKNYGKR--------------LSREDKKQVENFYLWKSTTKG- 359
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
+ GRPGWH EC+ DIH GG+DL FPHHENE AQ + ++
Sbjct: 360 VQYNYNGFLGRPGWHSECTLFIDDIFNSQTLDIHAGGIDLTFPHHENENAQYIAKNDVK- 418
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
W+H G + + +KMSKS GN I + E + + +
Sbjct: 419 ITKHWLHVGQVMFKNQKMSKSLGNVILAKDFDEDIFKIILINSSVTAPIYITNELIENA- 477
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
+ + + + + V D ++ + L++ + +
Sbjct: 478 KVIINKYKKLYFKFLNLSLSFNFDDNVRYMVRKIADKDFSSFNL--KLNEYIKAYNTSLE 535
Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESK 438
D L I ++ H L ++ +K+ LK K + AD RK L +
Sbjct: 536 ADKLTIVSSVIHFLNFSFIEQIEKDFRKN--KKIYDIWQGFLKQKNYEKADMFRKILIDQ 593
Query: 439 GFI 441
G I
Sbjct: 594 GLI 596
>gi|315124323|ref|YP_004066327.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315018045|gb|ADT66138.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 240
Score = 180 bits (456), Expect = 4e-43, Method: Composition-based stats.
Identities = 88/239 (36%), Positives = 132/239 (55%), Gaps = 16/239 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++ +++ ++ +D +I +Y+CGPTVYD AH+G+AR + FD+L R+L
Sbjct: 1 MRLLDSVTKEK---IKLDKKDISIYLCGPTVYDDAHLGHARSSVCFDLLRRVLLAQGN-- 55
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V + RN TDIDDKI+++ Q + IT + + +D L L P +PR
Sbjct: 56 RVKFARNYTDIDDKILKKMAQSG------QTLEEITEFYIKSYEEDMRVLNVLDPDFKPR 109
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
AT++I M+ LI+ + G Y + I FDTS Y S S R ++E R+ +
Sbjct: 110 ATHYITAMLDLIKKLAKDGFVYTLEDGIYFDTSKDEKYLSLSNRNLEENIS--RLSNEVQ 167
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K+N +DF+LWK E +ES +G+GRPGWH EC AM DIH GG+DL+FP
Sbjct: 168 KRNESDFVLWKF---DENFYESEFGKGRPGWHTECVAMIDSIFENTLDIHAGGIDLLFP 223
>gi|262043515|ref|ZP_06016633.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|259039138|gb|EEW40291.1| cysteine-tRNA ligase [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
Length = 164
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 66/172 (38%), Positives = 95/172 (55%), Gaps = 9/172 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
IK+ NTL + + S I MYVCG TVYD H+G+AR + FD++ R LR+ +
Sbjct: 1 MIKLTNTLGMQKELLVPVKESKIGMYVCGVTVYDLCHLGHARTFVAFDMIVRYLRFRGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
VT+VRNITDIDDKII+RAR + +T + + D +L L P +P
Sbjct: 61 --VTFVRNITDIDDKIIQRARDTG------EDWRSLTERMVHEMHIDFAKLGILPPNIEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQK 174
R T HIPQ+I +I+ ++ AY N +++F T+S YG S + I +
Sbjct: 113 RPTEHIPQIISMIERLLHRQFAYIAENGDVMFSTASAKGYGKLSGQDITMLR 164
>gi|291319975|ref|YP_003515233.1| cysteinyl tRNA synthetase [Mycoplasma agalactiae]
gi|290752304|emb|CBH40275.1| Cysteinyl tRNA synthetase (Cysteine tRNA ligase) [Mycoplasma
agalactiae]
Length = 413
Score = 179 bits (455), Expect = 7e-43, Method: Composition-based stats.
Identities = 115/427 (26%), Positives = 186/427 (43%), Gaps = 36/427 (8%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR-YYYGEKCVTYVRNITDIDDKIIERARQ 85
++YVCGPTVY+ HIGN RP+I FD + L+ Y K +V NITD+DDKII +A Q
Sbjct: 3 KIYVCGPTVYNEPHIGNLRPIITFDFM---LKAYRELNKEFKFVHNITDVDDKIINKAIQ 59
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
++ S + S + + + L + + T +I + ++ + +A
Sbjct: 60 ------MDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQTENA 113
Query: 146 YEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
Y+ N + FD + + + + K+ DF LWK T + +
Sbjct: 114 YKDANGNVWFDVLKNKSNYGLVSNQNIDNMVFDENSL--LKRFKGDFALWKS-TAVGIKF 170
Query: 205 ESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
S +G GRPGWH ECSA+ + G DIHGGG+DL FPHHENE Q ++ A
Sbjct: 171 RSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALY-QKQLAK 229
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
WI G LNL+G KMSKS GN I + + + A +++L I+ T
Sbjct: 230 EWIRCGQLNLDGEKMSKSVGNVILAEDFI-------NKYGAAILKLIFFNAKVSASINIT 282
Query: 324 VQRLTEAEILLSKWP------QTSTSKGIIDPAVLSALYNDLNTVSAIQAL------HKL 371
+ + + + +K+ + I++ S + A+ L L
Sbjct: 283 SELIENMKAIENKYKKVLFKIFVNYKNEILNKENYSKSEFVTKGLEAVSQLEFSDFNFML 342
Query: 372 ARESTKNHDLLPIFNASAHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
E K + + A + + KE N + ++ + + +K + AD
Sbjct: 343 NNEIKKFNKEPSLERAKDLFFLLSLFHKELTNISFYNRYLEIYDQWRYFIGIKDYKKADK 402
Query: 431 IRKQLES 437
+R++L
Sbjct: 403 LREKLIK 409
>gi|108706129|gb|ABF93924.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
gi|108706132|gb|ABF93927.1| Cysteinyl-tRNA synthetase, putative, expressed [Oryza sativa
Japonica Group]
Length = 420
Score = 179 bits (453), Expect = 1e-42, Method: Composition-based stats.
Identities = 139/427 (32%), Positives = 193/427 (45%), Gaps = 93/427 (21%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+L CL PT +PR T+HI +I LI I+ +G AY ++ F + P Y S S RK+
Sbjct: 1 MAQLQCLPPTCEPRVTDHIEHIIELITKIMENGKAYAMEGDVYFSVDTFPEYLSLSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
D G+RV K+NPADF LWK + EP W+SPWGRGRPGWHIECSAMS+HYLG V
Sbjct: 61 DHNLAGSRVAVDTRKRNPADFALWKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHV 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG DLIFPHHENE+AQS A E W+HNGF+N + +KMSKS+ NF TI +
Sbjct: 121 FDIHGGGKDLIFPHHENELAQSRAAY-PESEVKCWMHNGFVNKDDQKMSKSDKNFFTIRD 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--- 347
+++ + +R ++ THYR ++ + + L A + QT +
Sbjct: 180 IIDL-------YHPMALRFFLMRTHYRGDVNHSDKALEIASDRVYYIYQTLYDCEEVLSQ 232
Query: 348 ---------------------DPAVLSALYNDLNTVSAIQALHKLARESTKNHD------ 380
L ++ +DL T + L + N +
Sbjct: 233 YRGENISVPVPVEEQDMVNKHHSEFLESMADDLRTTDVLDGFTDLLKAINSNLNDFKKLQ 292
Query: 381 ------------------------------------LLPIFNASAHILGI-------EVC 397
L ILG+ E
Sbjct: 293 QKLEQQKKKQQQQKQQKQKQQQAQKQPEEYIQAMFALETEIKNKISILGLMPPSSLAEAL 352
Query: 398 KEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K+ +K + +++ +++R K K+F +D IRKQL SKG L D
Sbjct: 353 KQLKDKALKRAGLTEELLQEQIEQRTAARKNKQFDVSDQIRKQLGSKGIALMDEPT---- 408
Query: 452 QRMTRWK 458
T W+
Sbjct: 409 --GTVWR 413
>gi|167465216|ref|ZP_02330305.1| cysteinyl-tRNA synthetase [Paenibacillus larvae subsp. larvae
BRL-230010]
Length = 131
Score = 178 bits (452), Expect = 1e-42, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 80/137 (58%), Gaps = 8/137 (5%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++NT+ R+ EF+ + P + MYVCGPTVY++ HIGN RP I FDV++R L Y
Sbjct: 1 MTLRMFNTMTREKEEFKPVVPGKVSMYVCGPTVYNYIHIGNGRPAIFFDVVHRYLTYLGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ VTYV N TD+DDK+I +A + + + + + + +++D L
Sbjct: 61 D--VTYVVNFTDVDDKLIRKAEETG------ETVKELADRFIEAYLEDMEALGIRKADIN 112
Query: 123 PRATNHIPQMIYLIQNI 139
PR T ++ ++I I+++
Sbjct: 113 PRVTENMDEIISFIRSL 129
>gi|148377308|ref|YP_001256184.1| cysteinyl-tRNA synthetase (cysteine-trnaligase) [Mycoplasma
agalactiae PG2]
gi|148291354|emb|CAL58737.1| Cysteinyl tRNA synthetase (Cysteine tRNAligase) [Mycoplasma
agalactiae PG2]
Length = 413
Score = 178 bits (452), Expect = 2e-42, Method: Composition-based stats.
Identities = 113/427 (26%), Positives = 185/427 (43%), Gaps = 36/427 (8%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR-YYYGEKCVTYVRNITDIDDKIIERARQ 85
++YVCGPTVY+ HIGN RP+I FD + L+ Y K +V NITD+DDKII +A Q
Sbjct: 3 KIYVCGPTVYNEPHIGNLRPIITFDFM---LKAYRELNKEFKFVHNITDVDDKIINKAIQ 59
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
++ S + S + + + L + + T +I + ++ + +A
Sbjct: 60 ------MDVKESEVASFYFKSYQRLLRMLNVNTISKIEKVTKNINVINKYVEKLYQTENA 113
Query: 146 YEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
Y+ N + FD + + + K+ DF LWK T + +
Sbjct: 114 YKDANGNVWFDVLRNKGNYGLVSNQNIDNMVFDENSL--LKRFKGDFALWKS-TAVGIKF 170
Query: 205 ESPWGRGRPGWHIECSAMSSHYLG-KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
S +G GRPGWH ECSA+ + G DIHGGG+DL FPHHENE Q ++ A
Sbjct: 171 RSSFGMGRPGWHTECSALIDKHFGSDGVDIHGGGMDLTFPHHENENIQHYALY-QKQLAK 229
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
WI G LNL+ KMSKS GN I + + + A +++L I+ T
Sbjct: 230 EWIRCGQLNLDCEKMSKSVGNVILAEDFI-------NKYGAAILKLIFFNAKVSASINIT 282
Query: 324 VQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQAL------HKL 371
+ + + + +K+ + + I++ S + A+ L L
Sbjct: 283 SELIENMKAIENKYKKVLFKIFINYKNEILNRENYSKSEFVTKALEAVSQLEFSDFNFML 342
Query: 372 ARESTKNHDLLPIFNASAHILGIEVC-KEHLNKNISIAIEKLVQERLILLKMKKFSSADY 430
E + + + A + + KE N + ++ + + +K + AD
Sbjct: 343 NNEIKQFNKEPSLERAKDLFFLLSLFHKELTNISFYNRYLEIYDQWRYFIGIKDYKKADK 402
Query: 431 IRKQLES 437
+R++L
Sbjct: 403 LREKLIK 409
>gi|2500965|sp|P77986|SYC_STAXY RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1514657|emb|CAA68888.1| cysteinyl-tRNA synthetase [Staphylococcus xylosus]
Length = 118
Score = 177 bits (449), Expect = 3e-42, Method: Composition-based stats.
Identities = 52/126 (41%), Positives = 77/126 (61%), Gaps = 8/126 (6%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I +YNTL R+ F+ I+P ++MYVCGPTVY++ HIGNARP I +DV+ R Y E
Sbjct: 1 MITLYNTLTRQKETFEPIEPGKVKMYVCGPTVYNYIHIGNARPAINYDVVRRYFEYQGYE 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V YV N TD+DDK+I+R+++ +++++ IT + + F +D L T P
Sbjct: 61 --VIYVSNFTDVDDKLIKRSKE------LDESVETITDRYIKAFYEDVGALNVKKATSNP 112
Query: 124 RATNHI 129
R NH+
Sbjct: 113 RVMNHM 118
>gi|293363664|ref|ZP_06610414.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
gi|292552771|gb|EFF41531.1| putative cysteinyl-tRNA synthetase [Mycoplasma alligatoris A21JP2]
Length = 403
Score = 176 bits (447), Expect = 5e-42, Method: Composition-based stats.
Identities = 117/423 (27%), Positives = 180/423 (42%), Gaps = 38/423 (8%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
YVCGPTVY HIGN RP+ D+ + R +V NITDIDDKII +A +
Sbjct: 1 YVCGPTVYSDLHIGNIRPITTIDLFLKANRNL--NIPFIFVHNITDIDDKIINKAIELKV 58
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
I++K +Q+ + L TH ++ + IQ ++ + AY
Sbjct: 59 DEL------EISTKYAKQYKELLNALKIDTITHLVYVRKNMDLITDYIQELLNNKSAYFD 112
Query: 149 -NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
N ++FD N ++ ++ + + + +P+DF LWK +T + + S
Sbjct: 113 LNKNVLFDVKKYENNYGIVSKQKIDKMIFENENVQKN--HPSDFALWK-NTNIGVKFNSS 169
Query: 208 WGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
+G GRPGWH ECSA+ Y G+ DIH GG+DL FPHHENE Q + W+
Sbjct: 170 FGPGRPGWHTECSALIKKYFNGESLDIHSGGIDLKFPHHENENIQHFALYNRQ-ITKKWL 228
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
H G +N G+KMSKS GN + + LE + V R+ L++ P++ +
Sbjct: 229 HCGHINFAGQKMSKSLGNVVLAKDFLE-------QYGPNVFRMIQLLSDITSPMNLDEEF 281
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYN----------DLNTVSAIQALHKLAREST 376
+ A+ SK Q S + D + N L++ +
Sbjct: 282 IKNAQKAFSKIKQLSFKLFLQDNLSNEINQELYKELNLKIVEFNNSRFNFILNQQLKNLN 341
Query: 377 KNHD--LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
KN D + LG + + ++ + + L K + SAD RK
Sbjct: 342 KNFDFIIANTLIKVFKDLGF-----SFDFLVYEKMKNVYLDWQKELSNKNYESADKYRKI 396
Query: 435 LES 437
L
Sbjct: 397 LID 399
>gi|72389845|ref|XP_845217.1| cysteinyl-tRNA synthetase [Trypanosoma brucei TREU927]
gi|62359925|gb|AAX80350.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei]
gi|70801752|gb|AAZ11658.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 785
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 115/444 (25%), Positives = 175/444 (39%), Gaps = 80/444 (18%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
E ++ + + F +D RL P R T ++PQ++ IQ I+ +G A
Sbjct: 224 EGHTVTDQKIFDDHARRYERLFFEDMKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFA 283
Query: 146 YEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNPAD 190
Y + FDT++ G + ++ E + K++P D
Sbjct: 284 YSGETSVFFDTTAFIRAGHNYPKLKPISERDECNTTEAEMAEGEGALAACVAGEKRSPND 343
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP W SPWG GRPGWHIECS M+S LG DIH GG DL FPHH+NE A
Sbjct: 344 FALWKFSKPGEPHWPSPWGAGRPGWHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECA 403
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS + N ++H G L+++G KMSKS NFITI L+ +RL
Sbjct: 404 QSEAYSMQHQWVNYFLHCGHLHIKGLKMSKSLKNFITIRHALDDL-----GVTPRTMRLL 458
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------TSKGIIDPAV 351
L + + ++F+ Q + EA+ ++ A
Sbjct: 459 FLANQWNKAMNFSDQSIDEAKERERVLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAW 518
Query: 352 LSALY-------NDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHIL 392
+S N+ +T +A++A+ L E+ + H + +
Sbjct: 519 ISTESAVDAALRNNFDTPTAMEAIMGLVSETNRYLVTGQRPSATLVHKVGRYVTRILQVF 578
Query: 393 GIEVCKE--------HLNKNISIAIEKLVQERL----ILLKMK---KF-SSADYIRKQ-L 435
G+ + + + +E L++ R F D IR + L
Sbjct: 579 GVVDGNDMVGFTKTRQTDDQLVPVMEALLRFRDSVRSEAKASGTTANFLPLCDAIRDEWL 638
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
G +ED N T WK+
Sbjct: 639 AQAGIRIEDSPNGP-----TTWKR 657
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ + +F + +R Y CGPTVYD +H+G+AR + FD+L R++ + V Y
Sbjct: 42 NSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMED-FFGYKVIY 100
Query: 69 VRNITDIDDKIIERAR 84
NITDIDDKII+RAR
Sbjct: 101 QMNITDIDDKIIKRAR 116
>gi|261328614|emb|CBH11592.1| cysteinyl-tRNA synthetase, putative [Trypanosoma brucei gambiense
DAL972]
Length = 785
Score = 175 bits (444), Expect = 1e-41, Method: Composition-based stats.
Identities = 115/444 (25%), Positives = 175/444 (39%), Gaps = 80/444 (18%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
E ++ + + F +D RL P R T ++PQ++ IQ I+ +G A
Sbjct: 224 EGHTVTDQKIFDDHARRYERLFFEDMKRLGVKDPDVITRVTEYVPQVVNFIQRIMDNGFA 283
Query: 146 YEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNPAD 190
Y + FDT++ G + ++ E + K++P D
Sbjct: 284 YSGETSVFFDTTAFIRAGHNYPKLKPISERDECNTTEAEMAEGEGALAACVAGEKRSPND 343
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP W SPWG GRPGWHIECS M+S LG DIH GG DL FPHH+NE A
Sbjct: 344 FALWKFSKPGEPHWPSPWGAGRPGWHIECSVMASDILGTNMDIHSGGCDLKFPHHDNECA 403
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS + N ++H G L+++G KMSKS NFITI L+ +RL
Sbjct: 404 QSEAYSMQHQWVNYFLHCGHLHIKGLKMSKSLKNFITIRHALDDL-----GVTPRTMRLL 458
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTS-------------------TSKGIIDPAV 351
L + + ++F+ Q + EA+ ++ A
Sbjct: 459 FLANQWNKAMNFSDQSIDEAKERERVLRSFFGSVDMVLRSDTLKEIQGFNEHDRKLNEAW 518
Query: 352 LSALY-------NDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHIL 392
+S N+ +T +A++A+ L E+ + H + +
Sbjct: 519 ISTESAVDAALRNNFDTPTAMEAIMGLVSETNRYLVTGQRPSATLVHKVGRYVTRILQVF 578
Query: 393 GIEVCKE--------HLNKNISIAIEKLVQERL----ILLKMK---KF-SSADYIRKQ-L 435
G+ + + + +E L++ R F D IR + L
Sbjct: 579 GVVDGNDMVGFTKTRQTDDQLVPVMEALLRFRDSVRSEAKASGTTANFLPLCDAIRDEWL 638
Query: 436 ESKGFILEDYKNPDNGQRMTRWKQ 459
G +ED N T WK+
Sbjct: 639 AQAGIRIEDSPNGP-----TTWKR 657
Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 9 NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
N++ + +F + +R Y CGPTVYD +H+G+AR + FD+L R++ + V Y
Sbjct: 42 NSMTECLEKFAPREGRLVRWYTCGPTVYDVSHMGHARAYLTFDILRRIMED-FFGYKVIY 100
Query: 69 VRNITDIDDKIIERAR 84
NITDIDDKII+RAR
Sbjct: 101 QMNITDIDDKIIKRAR 116
>gi|270708936|ref|ZP_06223130.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
gi|270315728|gb|EFA27875.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
Length = 127
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 56/135 (41%), Positives = 80/135 (59%), Gaps = 8/135 (5%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ F+ I + + MYVCG TVYD HIG+ R + FDV+ R LR +
Sbjct: 1 MLKIFNTLTREKEIFKPIHENKVGMYVCGVTVYDLCHIGHGRTFVCFDVIARYLRSLGYD 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
TYVRNITD+DDKII+RA + + + + Q+ KD L L P +P
Sbjct: 61 L--TYVRNITDVDDKIIKRALENK------ETCDQLVDRMVQEMYKDFDALNVLRPDFEP 112
Query: 124 RATNHIPQMIYLIQN 138
RAT+HIP++I +++
Sbjct: 113 RATHHIPEIIEIVEK 127
>gi|226324505|ref|ZP_03800023.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
gi|225206953|gb|EEG89307.1| hypothetical protein COPCOM_02288 [Coprococcus comes ATCC 27758]
Length = 259
Score = 174 bits (442), Expect = 2e-41, Method: Composition-based stats.
Identities = 89/272 (32%), Positives = 128/272 (47%), Gaps = 49/272 (18%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS YLG+ DIH GG DLIFPHHENEIAQS A+ E A W+HN FLN++ RKMSKS
Sbjct: 1 MSRKYLGEQIDIHAGGEDLIFPHHENEIAQSEAANGKE-FARYWMHNAFLNIDNRKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---- 337
GNF T+ E+ + V+R ML HYR P++F+ + + ++ L +
Sbjct: 60 LGNFRTVREI-------SEQYDLQVLRFFMLSAHYRSPLNFSAELMEASKNGLERILNAT 112
Query: 338 -------------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ + A+ +D NT AI A+ +L + +
Sbjct: 113 DNLKHLIASVAAEEMSAEEKEAFSKTDAYVEEFEKAMDDDFNTADAIAAIFELVKYANTT 172
Query: 379 HD----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
LL +LG+ + K+ + + IEKL++ER K K F+ A
Sbjct: 173 ATAESSKEYLRGLLDRIVKLGDVLGLILDKKE--ELLDADIEKLIEERQAARKAKDFARA 230
Query: 429 DYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
D IR +L KG IL+D + +WK+K
Sbjct: 231 DAIRDELLEKGIILKDTR------EGVQWKKK 256
>gi|219122536|ref|XP_002181599.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406875|gb|EEC46813.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 373
Score = 174 bits (441), Expect = 2e-41, Method: Composition-based stats.
Identities = 106/356 (29%), Positives = 160/356 (44%), Gaps = 48/356 (13%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC----------------VTYVRNI 72
Y CGPTVY AH+G+AR + D++ R+L + Y + +V N+
Sbjct: 4 YTCGPTVYAPAHLGHARTYVCLDIVRRVLEHQYAQHRGGSSNSTMPSSPVPPPPLFVMNV 63
Query: 73 TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ- 131
TD+DDKI+ A + + + + F D RL L P R T H+
Sbjct: 64 TDVDDKILATAAARDETDSL-SSPLALARHYEAAFWSDLDRLNVLRPHVVTRVTEHVETA 122
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSI--------PNYGSFSRRKIDEQKMGTRVPEK 182
++ IQ ++ +G AY + ++ FD + + +
Sbjct: 123 ILPYIQRLVDNGTAYCATSGDVYFDVRAFEDRTNARTRYGKLAPPVSATDFYSRLDQTAE 182
Query: 183 YHKKNPADFILWKRSTPME-PGWESP-WGRGRPGWHIECSAMSSHYLGK-----VFDIHG 235
K++P DF+LWKR E W +P WG GRPGWHIECSAM + F +H
Sbjct: 183 TVKRDPRDFVLWKRRKEGEALFWTAPVWGEGRPGWHIECSAMIQAVQEQFQQTHRFVVHA 242
Query: 236 GGLDLIFPHHENEIAQSCCA------------DRIEKTANIWIHNGFLNLEGRKMSKSNG 283
GG+DL FPHH NEIAQ+ +++ WIH G ++++G KMSKS
Sbjct: 243 GGVDLQFPHHTNEIAQAEAHVLPDLDNVTDTTLPVQEWIPHWIHTGHVHIDGLKMSKSLK 302
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFTVQRLTEAEILLSKW 337
NF++I ELL+ S PA RL + YR P ++ ++++ + K
Sbjct: 303 NFVSIEELLQDDNPSSLSSPADDFRLWCLGMSGSYRGPATYSRDAVSQSSHVREKL 358
>gi|258652760|ref|YP_003201916.1| cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
gi|258555985|gb|ACV78927.1| Cysteine--tRNA ligase [Nakamurella multipartita DSM 44233]
Length = 392
Score = 174 bits (441), Expect = 3e-41, Method: Composition-based stats.
Identities = 111/348 (31%), Positives = 157/348 (45%), Gaps = 23/348 (6%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV--RNITDIDDKIIERA 83
RMYVCG T YD H+G+A + D +LR V V RN+TD+DD ++ A
Sbjct: 43 ARMYVCGITPYDVTHLGHAATFVWADAAQAVLRSIG----VHTVSCRNVTDVDD-VLTAA 97
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
H F +D L PTH PRA + +PQ+ L ++ G
Sbjct: 98 ADAH-----GRHYDEHAVYQEFLFEQDMAALRVARPTHTPRARHFVPQVRQLAAALLATG 152
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRSTPMEP 202
HAY+ + + F S E PE +++P D +W+ ST +P
Sbjct: 153 HAYQRDGSVYFRGRGAVAAAGLSGDLAVELSAEFGDAPEDPAREDPFDVPVWRPSTDRDP 212
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
W SPWG GRPGWH EC+AMS LG D+ GG DL+FPHH + A A + A
Sbjct: 213 AWPSPWGWGRPGWHAECAAMSMATLGAGVDVLIGGQDLVFPHHAYQAALVQAASGVAPFA 272
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
+H G ++ +GRKM+KS GN + I++LL RS P +R+ +L + ++
Sbjct: 273 RRAMHVGAVHYQGRKMAKSTGNLVLISDLL-------RSCPPAAVRMLLLNRPWGSGWEY 325
Query: 323 TVQRLTEAEILLSKWPQT---STSKGIIDPAVLSALYNDLNTVSAIQA 367
L A L AV +AL NDL+ +A+
Sbjct: 326 HEADLEAASADLEALYVAAGRPNRSAGAAEAVTAALLNDLDVPAAVAV 373
>gi|288918881|ref|ZP_06413225.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
gi|288349733|gb|EFC83966.1| Cysteine--tRNA ligase [Frankia sp. EUN1f]
Length = 375
Score = 173 bits (438), Expect = 5e-41, Method: Composition-based stats.
Identities = 99/397 (24%), Positives = 151/397 (38%), Gaps = 26/397 (6%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M+ ++ L R R+YVCG T Y H+G+A + D+ R+ R
Sbjct: 1 MRPDLR----LGRTPIPVV----GRARVYVCGITPYAVTHLGHAATYLWTDLTARVWRAA 52
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
V RNITD+DD + AR+ + + + F + + L P
Sbjct: 53 G--VQVELARNITDVDDAMFTEARR------LGMPFDQVAAMQRFSFDRSMSALGIQPPD 104
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H+P A + ++I L ++ GHAYE N + T+ + R
Sbjct: 105 HEPTARAAVTRVIELTTALLRAGHAYERNGTVYARTAEAADRAGLDRAAAITLAAEFNDD 164
Query: 181 EKYHKKNPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ ++ + R+ P E P W SPWG GRPGWH EC+AM G D+H GG
Sbjct: 165 PRDPDRDDPLDVAVWRADPAEGQLPSWPSPWGPGRPGWHAECAAMVLSTFGSSIDLHVGG 224
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
DL FPHH E + A + A W+H G + + G KMSKS GN +++LL
Sbjct: 225 ADLRFPHHAVESLLAEQATGVRPFARAWLHPGTVRVGGVKMSKSLGNLAFVDDLLTRHT- 283
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
+RL L + DF AE L + +
Sbjct: 284 ------PAALRLLCLGRAWDADWDFDESAFDAAEAALDGLYAAAARPNGGGGGERESPAA 337
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ + L + ++ +LG+
Sbjct: 338 AEVDAALLDNLDTVRAQAVALEAGGDAARRFISVLGL 374
>gi|158312510|ref|YP_001505018.1| cysteine--tRNA ligase [Frankia sp. EAN1pec]
gi|158107915|gb|ABW10112.1| Cysteine--tRNA ligase [Frankia sp. EAN1pec]
Length = 371
Score = 171 bits (434), Expect = 2e-40, Method: Composition-based stats.
Identities = 103/374 (27%), Positives = 148/374 (39%), Gaps = 22/374 (5%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
R+YVCG T Y H+G+A + D+ R+ R V RNITD+DD + + A
Sbjct: 16 GRARVYVCGITPYAVTHLGHAATYLWTDLAIRVWRNVG--VPVELARNITDVDDAMFDEA 73
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+ I S F + T L P H+P A + ++I L ++ G
Sbjct: 74 RRTGL------PFDQIASLQRFAFDRTMTSLGIRPPDHEPTARAAVTRVIELATALLRAG 127
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQK-MGTRVPEKYHKKNPADFILWKRSTPM-- 200
HAYE + T+ R P + +P D +W+ + P
Sbjct: 128 HAYERGGSVYARTAEAAERAGLDRAAAIALAAEYNDDPHDPERDDPLDVAVWRAARPDGG 187
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
P W SPWG GRPGWH EC+AM G D+H GG DL +PHH E + A ++
Sbjct: 188 YPSWPSPWGPGRPGWHAECAAMVLSTFGSSVDLHAGGADLRYPHHAVEALLAERATGVQP 247
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
A W+ G + G KMSKS GN +++LL +RL L+ +
Sbjct: 248 FARAWLRPGTVRSGGVKMSKSLGNLTFVDDLLTRH-------SPAAVRLLCLVRPRDDDW 300
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
DF EAE L + G + A D + + L + S
Sbjct: 301 DFDEAAFDEAEAGLDLLYSAAGRPGAV----RGASAVDEVDAALLDDLDTVRARSIALDS 356
Query: 381 LLPIFNASAHILGI 394
+LG+
Sbjct: 357 GGTAARRFISVLGL 370
>gi|21104458|dbj|BAB93499.1| OK/SW-CL.10 [Homo sapiens]
Length = 453
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 116/461 (25%), Positives = 179/461 (38%), Gaps = 91/461 (19%)
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
V ITD+DDKII+RA + +N + + + S + F +D L L PT R T
Sbjct: 1 MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54
Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+IPQ+I I+ II S + + ++
Sbjct: 55 NIPQIISFIEGIIASWERLFNGKRQCLLRSESLEETKYGKIGRRGPWSSPETSGLLTSRH 114
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPHHEN
Sbjct: 115 ANDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHEN 174
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
EIAQ + E+ N ++H+G L+ + KMSKS N+ITI + L +++
Sbjct: 175 EIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFL-------KTFSPD 227
Query: 306 VIRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQTSTS 343
V R L + YR ID++ + + +
Sbjct: 228 VFRFFCLRSSYRSAIDYSDSAMLQAQQLLLGLGSFLEDARAYMKGQLACGSVREAMLWER 287
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HDLLPIFN 386
AV +AL +D +T + A+ LA ++ F
Sbjct: 288 LSSTKRAVKAALADDFDTPRVVDAILGLAHHGNGQLRASLKEPEGPRSPAVFGAIISYFE 347
Query: 387 ASAHILGIEVCKEHLNKNISIA------IEKLVQERLILLKMKKFSSA------------ 428
+GI + + +++LV+ R + + F+ A
Sbjct: 348 QFFETVGISLANQQYVSGDGSEATLHGVVDELVRFRQKVRQ---FALAMPEATGDARRQQ 404
Query: 429 -----------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D + + W+
Sbjct: 405 LLERQPLLEACDTLRRGLTAHGINIKDRSSTTS-----TWE 440
>gi|58332582|ref|NP_001011365.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus (Silurana)
tropicalis]
gi|82232096|sp|Q5M7N8|SYCC_XENTR RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|56788842|gb|AAH88531.1| cysteinyl-tRNA synthetase [Xenopus (Silurana) tropicalis]
Length = 747
Score = 171 bits (433), Expect = 2e-40, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YN+L R F D + + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 25 QPGLRLYNSLTRSKELFVPQDGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-Y 83
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+ V Y NITDIDDKII+RARQ H +
Sbjct: 84 FKYDVFYCMNITDIDDKIIKRARQRHLFQQYRE 116
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I N S + ++ +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 202 GAQITDNSIFSQLPKHWESEYHRDMEALNVLPPDVLTRVSEYVPEIVAFVQRIVDNGYGY 261
Query: 147 EANNEIIF-----DTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + F S Y + +QK K++P DF L
Sbjct: 262 VSNGSVYFSTAKFHASEKHYYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPNDFAL 321
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP WESPWG+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 322 WKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 381
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L+ A +RLA LM
Sbjct: 382 AYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALQKNT-------ARQLRLAFLM 434
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K + G
Sbjct: 435 HAWKDTLDYSSNTMESAVQYEKFMNEFFLNVKDLLRAPTDVTGQFVKWEVPELELNSCFY 494
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AL ++++T + ++ + L + + A
Sbjct: 495 SKKAAVHEALCDNIDTRTVMEEMRSLVSQCNSYIASRKAAKQPPNRLLLRSVSSYLTAML 554
Query: 390 HILGIEVCKEHLNK---------NISIAIEKLVQE--------RLILLKMKK---FSSAD 429
+ G +E + N+ + +Q R I + K +D
Sbjct: 555 KVFGAIEGEEVIGFPIGGSDNSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVLQLSD 614
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 615 LLRDDVLPELGVRLEDHEG 633
>gi|194755026|ref|XP_001959793.1| GF11862 [Drosophila ananassae]
gi|190621091|gb|EDV36615.1| GF11862 [Drosophila ananassae]
Length = 741
Score = 171 bits (432), Expect = 3e-40, Method: Composition-based stats.
Identities = 45/87 (51%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ EF +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEEFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRIL-ANY 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII+RARQ H
Sbjct: 76 FGYHIHYVMNITDIDDKIIKRARQNHL 102
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 115/448 (25%), Positives = 170/448 (37%), Gaps = 89/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q+ I N + QF D L L P R + ++PQ+I IQ II +G
Sbjct: 192 AQKGAGINDNAVFEALPQYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIITFIQKIIDNG 251
Query: 144 HAYEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPAD 190
AY AN+ + FD +Y + K K++ D
Sbjct: 252 LAYAANSSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSAND 311
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+A
Sbjct: 312 FALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELA 371
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS A + ++H G L + G KMSKS NF+TI E L + A +RLA
Sbjct: 372 QSEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLA 424
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL--------------- 355
L+ +++ +D++ + A + + + VLS
Sbjct: 425 FLLHSWKDTLDYSENTMEMATQFEKFLNEFFLNVKDLTRHVLSEEPRRQFDTWTEVEAAL 484
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNA 387
++++T SA+ + +L S ++
Sbjct: 485 QKKFSTAQEQVYAALCDNIDTRSALDIVRELVSASNVYIRDNKSRLNSLLLRNVATYITD 544
Query: 388 SAHILG------------IEVCKEHLNKNISIA------IEKLVQERL----ILLKMKKF 425
H+ G I + ++ + + R +K F
Sbjct: 545 LLHVFGAIAGPRGGIGFPISGGSGSQAAGADLETTVLPYVQSMAEFRNLVREQAKALKAF 604
Query: 426 ---SSADYIRKQ-LESKGFILEDYKNPD 449
D +R L + G LED
Sbjct: 605 DILKLCDDLRDNVLPNLGVRLEDKDGGQ 632
>gi|323651392|gb|ADX97542.1| cysteinyl-tRNA synthetase [Courdo11 virus]
Length = 283
Score = 170 bits (431), Expect = 4e-40, Method: Composition-based stats.
Identities = 84/262 (32%), Positives = 119/262 (45%), Gaps = 20/262 (7%)
Query: 24 SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+ I MYVCGPTVY+ +HIG+AR ++ D++ R + + V NITDIDDKII+ A
Sbjct: 3 NTINMYVCGPTVYNDSHIGHARIYVMVDIINRTMTNILNQDT-HLVMNITDIDDKIIKAA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S ++ K +F + +L P R + I +I IQ II +
Sbjct: 62 NDQLVS------WKTLSKKYEDKFFESMAKLGVAKPDVVIRVSESIDDIIKYIQQIINND 115
Query: 144 HAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK----YHKKNPADFILWKRST 198
AY + + FDT N G ID ++ K++ DF LWK
Sbjct: 116 FAYVTFDGSVYFDTIKYVNAGYILDCDIDIEEQTYESQIASEIINEKRHIKDFALWKNRA 175
Query: 199 PMEPGWESPW--------GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
+ G+ + G PGWHIECSAM +G +IH GG+DL FPHH NE
Sbjct: 176 DYDVGFFVEFIFNNSIIKTYGVPGWHIECSAMIERTIGDSVNIHFGGIDLKFPHHHNECL 235
Query: 251 QSCCADRIEKTANIWIHNGFLN 272
Q+ + N I+
Sbjct: 236 QANAYYHPKYKPNTNINTEKWT 257
>gi|321478384|gb|EFX89341.1| hypothetical protein DAPPUDRAFT_303176 [Daphnia pulex]
Length = 730
Score = 170 bits (430), Expect = 4e-40, Method: Composition-based stats.
Identities = 47/98 (47%), Positives = 62/98 (63%), Gaps = 1/98 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++KIYN+L RK F + NI Y CGPTVYD +H+G+AR + FD+L R+LR Y
Sbjct: 10 SMELKIYNSLTRKKEVFTPQNGKNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRD-Y 68
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
+TYV NITDIDDKII+RARQ + +S +
Sbjct: 69 FGYDITYVMNITDIDDKIIKRARQNYLYEKYAAQMSEL 106
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 111/440 (25%), Positives = 170/440 (38%), Gaps = 86/440 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N + + ++F KD L L R + ++P+++ I II G AY
Sbjct: 184 GMDVSDNAIFASLPRHWEEEFYKDMAALNVLPADVITRVSEYVPEIVDYISRIIERGLAY 243
Query: 147 EANNEIIF-----DTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
AN + F D+ Y + K KK+P DF L
Sbjct: 244 SANGSVYFNVSKFDSQKNHKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPNDFAL 303
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S EP W+SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 304 WKTSKSGEPSWDSPWGKGRPGWHIECSVMASAILGSSMDIHTGGVDLKFPHHDNELAQSE 363
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
++ ++H G L ++G KMSKS NFITI + L + +R+ L+
Sbjct: 364 AYYDNDEWVRYFLHTGHLTIQGCKMSKSLKNFITIQDALSRN-------SSRELRIFFLL 416
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
++E +D++ + EA + + +
Sbjct: 417 HPWKETLDYSDSAMDEASSYEKMLREFFLNAKDLLRNGPSSNTAAEYFQKWSTAEQEVNT 476
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-------------LLPIFNASA 389
V AL ++++T +++ A+ + K +
Sbjct: 477 RFVETKNRVREALCDNIDTKTSLDAIKSMISACNKYLAQLKQSANRVLIKVIAEYVTRLF 536
Query: 390 HILGIEVCKEHLN----------KNISIAI----EKLVQERLILLKM-------KKFSSA 428
I G+ K+ L N+ + E L R + K +
Sbjct: 537 QIFGVIEGKQTLGFPSESSSGGTDNVEEIVMPVLEALADFREEVRKEARQLRATRVLELC 596
Query: 429 DYIRKQ-LESKGFILEDYKN 447
D IR L + G LED +N
Sbjct: 597 DQIRDDVLPNLGVRLEDREN 616
>gi|125807796|ref|XP_001360523.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
gi|122097947|sp|Q291L4|SYCC_DROPS RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|54635695|gb|EAL25098.1| GA21073 [Drosophila pseudoobscura pseudoobscura]
Length = 741
Score = 170 bits (430), Expect = 6e-40, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+++YN+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILAD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII+RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIKRARQNHL 102
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 116/446 (26%), Positives = 173/446 (38%), Gaps = 89/446 (19%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ I N + QF D L L P R + ++PQ++ IQ II +G
Sbjct: 193 KKGAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AY ANN + FD + K+ + G + K++ DF
Sbjct: 253 AYAANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWGRGRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + ++H G L + G KMSKS NF+TI E L + A +RLA
Sbjct: 373 SEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---------------- 355
L+ +++ +D++ + A + + + VLS
Sbjct: 426 LLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTDVEAALQ 485
Query: 356 --------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
++++T SA+ A+ +L S ++
Sbjct: 486 KKFSSSQVQVHAALCDNVDTRSALDAIRELVSASNVYIRDNKSRLNSLLLRNVATYITDL 545
Query: 389 AHILG------------IEVCKEHLNKNISIA------IEKLVQERL----ILLKMKKF- 425
H+ G + + ++ L + R +K F
Sbjct: 546 LHVFGAIAGPRGGIGFPVSGGAGPQAAGGDLETTVLPYVQTLAEFRNLVREQAKALKAFD 605
Query: 426 --SSADYIRK-QLESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 606 ILKLCDDLRDNILPNLGVRLEDKDGG 631
>gi|780131|gb|AAD09434.1| cysteinyl-tRNA synthetase [Buchnera aphidicola]
Length = 178
Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 73/185 (39%), Positives = 107/185 (57%), Gaps = 9/185 (4%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NT K F+ I I +YVCG TVYDF HIG+AR +VFD++ R LR +
Sbjct: 1 MLKIFNTATSKKEIFKPIKNKKINLYVCGVTVYDFCHIGHARTFVVFDMIVRYLRLIGFQ 60
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQP 123
V Y+RNITDIDDKII ++ +E IS T+ ++ KD + L P +P
Sbjct: 61 --VKYIRNITDIDDKIILKSLKEKID------ISAFTNIMIKEMNKDFSLLGISPPDEEP 112
Query: 124 RATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
R TN+I +I +I+ +I + +AY + ++IF +S YG+ SR+ +D+ GTR+
Sbjct: 113 RVTNYIIDIIKVIEKLIKNKNAYVNDHGDVIFSINSDKFYGTLSRQSLDKLISGTRISID 172
Query: 183 YHKKN 187
KKN
Sbjct: 173 KEKKN 177
>gi|195150237|ref|XP_002016061.1| GL10698 [Drosophila persimilis]
gi|194109908|gb|EDW31951.1| GL10698 [Drosophila persimilis]
Length = 741
Score = 169 bits (429), Expect = 6e-40, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 61/87 (70%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+++YN+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLRLYNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILAD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII+RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIKRARQNHL 102
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 116/446 (26%), Positives = 173/446 (38%), Gaps = 89/446 (19%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ I N + QF D L L P R + ++PQ++ IQ II +G
Sbjct: 193 KKGAEINDNAVFESLPRFWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQKIIDNGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AY ANN + FD + K+ + G + K++ DF
Sbjct: 253 AYAANNSVYFDVNGFDRKEKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWGRGRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + ++H G L + G KMSKS NF+TI E L + A +RLA
Sbjct: 373 SEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---------------- 355
L+ +++ +D++ + A + + + VLS
Sbjct: 426 LLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTDVEAALQ 485
Query: 356 --------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
++++T SA+ A+ +L S ++
Sbjct: 486 KKFSSSQVQVHAALCDNVDTRSALDAIRELVSASNVYIRDNKSRLNSLLLRNVATYITDL 545
Query: 389 AHILG------------IEVCKEHLNKNISIA------IEKLVQERL----ILLKMKKF- 425
H+ G + + ++ L + R +K F
Sbjct: 546 LHVFGAIAGPRGGIGFPVSGGAGPQAAGGDLETTVLPYVQTLAEFRNLVREQAKALKAFD 605
Query: 426 --SSADYIRK-QLESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 606 ILKLCDDLRDNILPNLGVRLEDKDGG 631
>gi|46205378|ref|ZP_00048616.2| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
magnetotacticum MS-1]
Length = 137
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 59/124 (47%), Positives = 75/124 (60%), Gaps = 6/124 (4%)
Query: 1 MKKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
M +++YNTL R+ F IDP+N+RMY CGPTVYD A IGNARP+IVFD+L+RLLR+
Sbjct: 1 MTPMLRLYNTLTREKAAFAPIDPANVRMYACGPTVYDAAXIGNARPIIVFDLLFRLLRHL 60
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
YG VTY RN+TD+DDKI RA + + I +T QF +D L L
Sbjct: 61 YGAAHVTYARNVTDVDDKINARALERGIT------IRDLTDGTLAQFHEDLRDLGVLMAE 114
Query: 121 HQPR 124
Sbjct: 115 DVIG 118
>gi|229100889|ref|ZP_04231693.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
gi|228682468|gb|EEL36541.1| hypothetical protein bcere0019_940 [Bacillus cereus Rock3-28]
Length = 254
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 84/270 (31%), Positives = 125/270 (46%), Gaps = 49/270 (18%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
M+ YLG DIH GG DL FPHHENEIAQS + A W+HNG++N++ KMSKS
Sbjct: 1 MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYINIDNEKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNFI +++++ + + +IR ML HYR PI+F+ + L L +
Sbjct: 60 LGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAY 112
Query: 342 TSK---------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
+ A A+ +D NT +AI L+ +A + +
Sbjct: 113 GNLKHRMESSANLTDHNEKWLAEMEKFQAAFEEAMDDDFNTANAITELYNVANHANQYLL 172
Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
+ ILG+E+ KE L + IE L+Q+R+ K + F+ +D
Sbjct: 173 EEHTSKVVIEAYVKQLETLFDILGLELAKEEL---LDEEIEALIQKRIEARKNRDFALSD 229
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L+ + ILED + TRWK+
Sbjct: 230 QIRDDLKERNIILEDT------AQGTRWKR 253
>gi|207092910|ref|ZP_03240697.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
Length = 332
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 100/342 (29%), Positives = 149/342 (43%), Gaps = 47/342 (13%)
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESP 207
N +I DTS +YGS S R+ K+ DF+LWK + G++SP
Sbjct: 5 NGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSP 62
Query: 208 WGRGRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
G+GRPGWHIECS+M DIH GG DL+FPHHENE Q+ CA +E A
Sbjct: 63 LGKGRPGWHIECSSMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE-LA 121
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+HNGF+N+ KMSKS GN I + L +++ ++R +L HYR ++F
Sbjct: 122 KYWMHNGFVNINNEKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNF 174
Query: 323 TVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ L ++ L K + +L + +DLN A+ L +
Sbjct: 175 NEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNVSKALSVLESMLSS 234
Query: 375 STKNHD-----------LLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERL 417
+ + D +L +LGI +++ IE ++ER
Sbjct: 235 TNEKLDQNPKNKTLKGEILANLKFVEELLGIGFKDPSAYFQLGVSESEKQEIENKIEERK 294
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K F AD IR++L + L D + T W++
Sbjct: 295 RAKVQKDFLKADRIREELLKQKIALMDT------PQGTIWEK 330
>gi|157105607|ref|XP_001648945.1| cysteinyl-tRNA synthetase [Aedes aegypti]
gi|108880067|gb|EAT44292.1| cysteinyl-tRNA synthetase [Aedes aegypti]
Length = 735
Score = 169 bits (427), Expect = 1e-39, Method: Composition-based stats.
Identities = 63/353 (17%), Positives = 118/353 (33%), Gaps = 20/353 (5%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+++YN+L R+ F D N++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 EPKLRLYNSLTRQKELFVPKDGKNVKWYSCGPTVYDASHMGHARSYISFDILRRVLTD-Y 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V YV NITDIDDKII+RARQ + + T +
Sbjct: 77 FGYNVLYVMNITDIDDKIIKRARQNYL-------YERYVERTTSLETLLDDNKEVMEAFQ 129
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+ P +++ ++ A N I T R +++ K
Sbjct: 130 GNLSKTTDPDKKAMMERMLEKLTAAVDNLTIAVKTGEEGKVKEAQSRFLEDSKDPLSDLL 189
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
+ + + P WE + + ++ + + V I +
Sbjct: 190 DKKEGASVNENSIFETLP--RYWEDEFHKDMNALNVLAPDVLTRVSEYVPQI------VE 241
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN----ELLETKKF 297
+ + + A+ + + + ++ G+ ++ +L T+
Sbjct: 242 YIQKIIDNGLAYEANGSVYFDVAGFDKREKHYYAKLVPEAYGDAKSLQEGEGDLSTTEDR 301
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
L + + + + +D
Sbjct: 302 LSEKRSPNDFALWKNSKAGEPWWNSPWGKGRPGWHIECSAMASDICGDYLDIH 354
Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats.
Identities = 118/442 (26%), Positives = 173/442 (39%), Gaps = 85/442 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++E S+ N + +F KD L LAP R + ++PQ++ IQ II +G
Sbjct: 191 KKEGASVNENSIFETLPRYWEDEFHKDMNALNVLAPDVLTRVSEYVPQIVEYIQKIIDNG 250
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKID-------------EQKMGTRVPEKYHKKNPAD 190
AYEAN + FD + K+ E + T K++P D
Sbjct: 251 LAYEANGSVYFDVAGFDKREKHYYAKLVPEAYGDAKSLQEGEGDLSTTEDRLSEKRSPND 310
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W SPWG+GRPGWHIECSAM+S G DIH GG+DL FPHH+NE+A
Sbjct: 311 FALWKNSKAGEPWWNSPWGKGRPGWHIECSAMASDICGDYLDIHTGGVDLKFPHHDNELA 370
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS D + ++H G L + G KMSKS NF+TI + L + A +RLA
Sbjct: 371 QSEAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQAL-------QKHTATQLRLA 423
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND------------ 358
L+ +++ +D++ + A + + + V+S D
Sbjct: 424 FLLHSWKDTLDYSENTMEMAVQYERFLNEFFLNVKDLTRHVVSGKPRDQFNLWTPVEADL 483
Query: 359 ------------------LNTVSAIQALHKLARESTKN-------------HDLLPIFNA 387
++T SA+ A+ L S +
Sbjct: 484 QQKLNATKDAVHVALCDNIDTRSALDAVRDLVSHSNVYIRDHKNELNALLLRRIAGYITD 543
Query: 388 SAHILG----------IEVCKEHLNKNISIAI--------EKLVQERLILLKMK--K-FS 426
HI G V + ++ + + R +K
Sbjct: 544 LLHIFGAINGPRGGIGFPVGGSAGSADLEETVMPYLVALSDFRTAVREQARTLKATDILQ 603
Query: 427 SADYIRKQ-LESKGFILEDYKN 447
D IR L + G LED +
Sbjct: 604 LCDQIRDDILPNLGVRLEDREG 625
>gi|73982655|ref|XP_863344.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 3
[Canis familiaris]
Length = 827
Score = 168 bits (426), Expect = 1e-39, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFG 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII+RARQ + +
Sbjct: 170 YDVFYCMNITDVDDKIIKRARQNYLFEEYRE 200
Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats.
Identities = 108/439 (24%), Positives = 176/439 (40%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 282 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 341
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 342 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 401
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 402 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 461
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 462 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 514
Query: 314 THYREPIDFTVQRLT---------------------EAEILLSKWPQTSTSKGIIDPAVL 352
+++ +D++ + + ++ + + ++ +
Sbjct: 515 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 574
Query: 353 SAL-------YNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
++++T + ++ + L + +
Sbjct: 575 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 634
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 635 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 694
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 695 ALRDDILPELGVRLEDHEG 713
>gi|195122821|ref|XP_002005909.1| GI18835 [Drosophila mojavensis]
gi|193910977|gb|EDW09844.1| GI18835 [Drosophila mojavensis]
Length = 740
Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/84 (52%), Positives = 61/84 (72%), Gaps = 1/84 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++K+YN+L R+ EF +D +N++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPQLKLYNSLTRQKEEFVPLDGNNVKWYSCGPTVYDASHMGHARSYISFDILRRILAD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQ 85
+ YV NITDIDDKII+RARQ
Sbjct: 76 FGYNIHYVMNITDIDDKIIKRARQ 99
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 120/445 (26%), Positives = 177/445 (39%), Gaps = 88/445 (19%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ + N + +F D L L P R + ++PQ++ IQ II +G
Sbjct: 193 KQGAHVNDNSVFEALPRFWEDKFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AYEAN + FD + K+ + G + K++ DF
Sbjct: 253 AYEANGSVYFDVNGFDKRDKHHYAKLVPEAYGDTASLQEGEGDLSVTEDRLSEKRSANDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWGRGRPGWHIECSAM+S G +FDIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + ++H G L + G KMSKS NF+TI E L + A +RLA
Sbjct: 373 SEAAFGESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLT--------------------------EAEILLSKWPQTSTSK- 344
L+ +++ +D++ + E S+W +
Sbjct: 426 LLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRQVLSGEPMQQFSEWTAVEAALQ 485
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-HDLLPIFNASA----------- 389
V +AL ++++T SA+ + +L + D N+
Sbjct: 486 AKFNEAQAQVHAALCDNIDTRSALDCVRELVSTTNVYIRDNKSRLNSLLLRKIAIYVTDL 545
Query: 390 -HILG------------IEVCKEHLNKNISIAI---------EKLVQERLILLKMKKF-- 425
HI G ++ N A+ E R +K F
Sbjct: 546 LHIFGAIAGPRGGIGFPLKGADSDSATNDHEAVVMPYVQSVAEFRNLVREQAKALKAFDI 605
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED N
Sbjct: 606 LKLCDDLRDDVLPNLGVRLEDKDNG 630
>gi|2145826|pir||S72854 cysteine-tRNA ligase (EC 6.1.1.16) - Mycobacterium leprae
gi|467009|gb|AAA17194.1| syC [Mycobacterium leprae]
Length = 241
Score = 168 bits (426), Expect = 2e-39, Method: Composition-based stats.
Identities = 81/237 (34%), Positives = 118/237 (49%), Gaps = 15/237 (6%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
MYVCG T YD H+G+A + FD+++RL E V YV+N+TD+DD + ERA +
Sbjct: 1 MYVCGITPYDATHLGHAATYLAFDLIHRLWLDLGHE--VHYVQNVTDVDDPLFERADRNG 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + F D L L P AT I +++ L+ +++ G AY
Sbjct: 59 VD------WRDLAEREVALFRDDMASLRILPPHDYVAATETIVEIVELVDKMLVSGAAYV 112
Query: 148 ANN---EIIFDTSSIPNYGSFSRRKIDEQ----KMGTRVPEKYHKKNPADFILWKRSTPM 200
++ +I F + +G S D + P + K D +LW+ + P
Sbjct: 113 IDDEYPDIYFRADATLQFGYESGYDRDTMLRLYEQSGGDPRRPGKNGELDALLWRAARPG 172
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
EP W SP+G GRPGWH+EC+A++ +G DI GGG DLIFPHHE A + C
Sbjct: 173 EPSWSSPFGPGRPGWHVECAAIALSRIGIGLDIQGGGSDLIFPHHEFTAAHAECVRG 229
>gi|170049267|ref|XP_001855148.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
gi|167871109|gb|EDS34492.1| cysteinyl-tRNA synthetase [Culex quinquefasciatus]
Length = 738
Score = 168 bits (425), Expect = 2e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 59/87 (67%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++YN+L R+ F D N+R Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 EPRLRLYNSLTRQKELFVPRDGRNVRWYSCGPTVYDASHMGHARSYISFDILRRVLTD-Y 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ +
Sbjct: 77 FGFNVLYVMNITDIDDKIIKRARQNYL 103
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 118/448 (26%), Positives = 176/448 (39%), Gaps = 88/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+E S+ N + +F KD L L P R + ++PQ++ IQ II +G
Sbjct: 191 RKEGSSVSENSIFETLPRYWEDEFHKDMDALNVLPPDVLTRVSEYVPQIVEYIQKIIENG 250
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKI-----------DEQKMGTRVPEKYHKKNPADFI 192
AYEAN + FD + K+ E + + K++ DF
Sbjct: 251 LAYEANGSVYFDVAGFDAREKHHYAKLVPEAYGDAKSLQEGEGDLSGDQSSEKRSANDFA 310
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWGRGRPGWHIECSAM+S G DIH GG+DL FPHH+NE+AQS
Sbjct: 311 LWKCSKAGEPWWDSPWGRGRPGWHIECSAMASDICGDFLDIHTGGVDLKFPHHDNELAQS 370
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
D + ++H G L + G KMSKS NF+TI + L + A +RLA L
Sbjct: 371 EAHDNSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQAL-------QKHTATQLRLAFL 423
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV--------------------- 351
+ +++ +D++ + A + + + + V
Sbjct: 424 LHSWKDTLDYSENTMEMAVQYERQLNEFFLNVKDLTRHVVSGKPRDRFNPWTPVESDLQQ 483
Query: 352 ---------LSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
AL ++++T +A+ A+ L S ++
Sbjct: 484 KLNASKAAVHEALCDNIDTRTALDAIRDLISYSNVYIRDHKSALNALLLRNIATYITELL 543
Query: 390 HILG-----------------------IEVCKEHLNKNISIAIEKLVQERLILLKMK--- 423
HI G +E + +S E R +K
Sbjct: 544 HIFGAIVGPRGGIGFPVGGSAGTADVRFFFLEETVMPYLSALAEFRAAVREQARTLKASE 603
Query: 424 KFSSADYIRKQ-LESKGFILEDYKNPDN 450
+ D IR L + G LED +
Sbjct: 604 ILALCDQIRDDTLPNLGVRLEDRDGAPS 631
>gi|62240992|ref|NP_001014437.1| cysteinyl-tRNA synthetase, cytoplasmic isoform c [Homo sapiens]
gi|57997552|emb|CAI46108.1| hypothetical protein [Homo sapiens]
gi|119622946|gb|EAX02541.1| cysteinyl-tRNA synthetase, isoform CRA_e [Homo sapiens]
gi|194380236|dbj|BAG63885.1| unnamed protein product [Homo sapiens]
Length = 831
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 200
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDNILPELGVRFEDHEG 717
>gi|195382430|ref|XP_002049933.1| GJ21863 [Drosophila virilis]
gi|194144730|gb|EDW61126.1| GJ21863 [Drosophila virilis]
Length = 741
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/84 (50%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++YN+L R+ EF + +N++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPQLRLYNSLTRQKEEFVPLSGNNVKWYSCGPTVYDASHMGHARSYISFDILRRIL-ANY 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQ 85
+ YV NITDIDDKII+RARQ
Sbjct: 76 FGYNIHYVMNITDIDDKIIKRARQ 99
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 116/446 (26%), Positives = 174/446 (39%), Gaps = 89/446 (19%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ + N + F D L L P R + ++PQ++ IQ II +G
Sbjct: 193 KKGAHVNDNTVFEALPRYWEDHFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AYEAN + FD + K+ + G + K++P DF
Sbjct: 253 AYEANGSVYFDVNGFDKREKHHYAKLVPEAYGDTTSLQEGEGDLSVTADRLSEKRSPNDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWG GRPGWHIECSAM+S G +FDIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGHGRPGWHIECSAMASDIFGSIFDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + ++H G L + G KMSKS NF+TI E L R A +RLA
Sbjct: 373 SEAAFGESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------RKHSATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL---------------- 355
L+ +++ +D++ + A + + + VLS
Sbjct: 426 LLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSGKPMQQFSEWTAVEAALQ 485
Query: 356 --------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
++++T SA+ ++ +L + +
Sbjct: 486 AKFNEAQGQVHAALCDNIDTRSALDSVRELVSTTNIYIRDNKTRLNHLLLRKVATYITDL 545
Query: 389 AHILGI-----------EVCKEHLNKNISIA-------IEKLVQERL----ILLKMKKF- 425
HI G E N I+ ++ + + R +K F
Sbjct: 546 LHIFGAISGPRGGIGFPLTGTESNNSEINDHESVVMPYVQSVAEFRNFVREQAKVLKAFD 605
Query: 426 --SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 606 ILKLCDDLRDDVLPNLGVRLEDKDGG 631
>gi|303304987|ref|NP_001181926.1| cysteinyl-tRNA synthetase, cytoplasmic isoform e [Homo sapiens]
Length = 809
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 200
Score = 139 bits (350), Expect = 9e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDNILPELGVRFEDHEG 717
>gi|297687902|ref|XP_002821438.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
[Pongo abelii]
Length = 831
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 200
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|194391202|dbj|BAG60719.1| unnamed protein product [Homo sapiens]
Length = 809
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 200
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + +
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRASVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDNILPELGVRFEDHEG 717
>gi|332835581|ref|XP_003312912.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
Length = 831
Score = 167 bits (424), Expect = 2e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 200
Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 579 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|109105037|ref|XP_001096302.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Macaca
mulatta]
Length = 831
Score = 167 bits (424), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 111 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V Y NITDIDDKII+RARQ H
Sbjct: 170 FDVFYCMNITDIDDKIIKRARQNHL 194
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 578
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 579 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + N+ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|194383970|dbj|BAG59343.1| unnamed protein product [Homo sapiens]
Length = 739
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 56/98 (57%), Gaps = 1/98 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 41 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 99
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
V Y NITDIDDKII+RARQ H +
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYREKRPEAAQ 137
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 335
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 568
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 629 ALRDNILPELGVRFEDHEG 647
>gi|297687910|ref|XP_002821442.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 5
[Pongo abelii]
Length = 739
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 41 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 99
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 130
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 335
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 568
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 629 ALRDDILPELGVRFEDHEG 647
>gi|30583997|gb|AAP36247.1| Homo sapiens cysteinyl-tRNA synthetase [synthetic construct]
gi|60652837|gb|AAX29113.1| cysteinyl-tRNA synthetase [synthetic construct]
gi|60652839|gb|AAX29114.1| cysteinyl-tRNA synthetase [synthetic construct]
Length = 749
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDNILPELGVRFEDHEG 634
>gi|73982653|ref|XP_851224.1| PREDICTED: similar to cysteinyl-tRNA synthetase isoform c isoform 2
[Canis familiaris]
Length = 831
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 111 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFG 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII+RARQ + +
Sbjct: 170 YDVFYCMNITDVDDKIIKRARQNYLFEEYRE 200
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 108/439 (24%), Positives = 176/439 (40%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLT---------------------EAEILLSKWPQTSTSKGIIDPAVL 352
+++ +D++ + + ++ + + ++ +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 578
Query: 353 SAL-------YNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
++++T + ++ + L + +
Sbjct: 579 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 699 ALRDDILPELGVRLEDHEG 717
>gi|10835051|ref|NP_001742.1| cysteinyl-tRNA synthetase, cytoplasmic isoform b [Homo sapiens]
gi|20141641|sp|P49589|SYCC_HUMAN RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|9837515|gb|AAG00578.1|AF288206_1 cytoplasmic cysteinyl-tRNA synthetase [Homo sapiens]
gi|12804055|gb|AAH02880.1| Cysteinyl-tRNA synthetase [Homo sapiens]
gi|32880169|gb|AAP88915.1| cysteinyl-tRNA synthetase [Homo sapiens]
gi|60655925|gb|AAX32526.1| cysteinyl-tRNA synthetase [synthetic construct]
gi|119622941|gb|EAX02536.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
gi|119622945|gb|EAX02540.1| cysteinyl-tRNA synthetase, isoform CRA_a [Homo sapiens]
gi|123979740|gb|ABM81699.1| cysteinyl-tRNA synthetase [synthetic construct]
Length = 748
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDNILPELGVRFEDHEG 634
>gi|158259887|dbj|BAF82121.1| unnamed protein product [Homo sapiens]
Length = 647
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
++ +D++ + A + + I
Sbjct: 436 HSWKGTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDNILPELGVRFEDHEG 634
>gi|332835585|ref|XP_001155951.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 4 [Pan
troglodytes]
Length = 739
Score = 167 bits (423), Expect = 3e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 41 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 99
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 100 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 130
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 216 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 275
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 276 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 335
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 336 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 395
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 396 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 448
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 449 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 508
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 509 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 568
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 569 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 628
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 629 ALRDDILPELGVRFEDHEG 647
>gi|149061785|gb|EDM12208.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_c [Rattus
norvegicus]
Length = 473
Score = 167 bits (423), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 97.5 bits (241), Expect = 4e-18, Method: Composition-based stats.
Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQ
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQ 463
>gi|195488337|ref|XP_002092271.1| GE11760 [Drosophila yakuba]
gi|194178372|gb|EDW91983.1| GE11760 [Drosophila yakuba]
Length = 741
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIRRARQNHL 102
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 115/445 (25%), Positives = 170/445 (38%), Gaps = 89/445 (20%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ I N + QF D L L P R + ++PQ++ IQ II +G A
Sbjct: 194 KGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLA 253
Query: 146 YEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFI 192
Y ANN + FD +Y + K K++ DF
Sbjct: 254 YAANNSVYFDVNGFDKRDKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFA 313
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQS
Sbjct: 314 LWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQS 373
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A + ++H G L + G KMSKS NF+TI E L + A +RLA L
Sbjct: 374 EAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFL 426
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----------------- 355
+ +++ +D++ + A + + + VLS
Sbjct: 427 LHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQK 486
Query: 356 -------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
++++T SA+ A+ +L S ++
Sbjct: 487 KFSHSQVQVHAALCDNIDTRSALDAIRELVSASNVYIRDNKTRLNSLLLRNVATYITDLL 546
Query: 390 HILG------------IEVCKEHLNKNISIA------IEKLVQERL----ILLKMKKF-- 425
H+ G + + ++ L + R +K F
Sbjct: 547 HVFGAIAGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRNLVREQAKTLKAFDI 606
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 607 LKLCDDLRDNVLPNLGVRLEDKDGG 631
>gi|195028283|ref|XP_001987006.1| GH21680 [Drosophila grimshawi]
gi|193903006|gb|EDW01873.1| GH21680 [Drosophila grimshawi]
Length = 743
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 60/84 (71%), Gaps = 1/84 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++++YN+L R+ F ++ +N++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 RPQLRLYNSLTRQKETFVPLEGNNVKWYSCGPTVYDASHMGHARSYISFDILRRIL-ANY 76
Query: 62 GEKCVTYVRNITDIDDKIIERARQ 85
+ YV NITDIDDKII+RARQ
Sbjct: 77 FGYNIQYVMNITDIDDKIIKRARQ 100
Score = 146 bits (368), Expect = 9e-33, Method: Composition-based stats.
Identities = 112/448 (25%), Positives = 171/448 (38%), Gaps = 90/448 (20%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ + N + +F D L L P R + ++PQ++ IQ II +
Sbjct: 194 RKGAQVKDNSVFEALPRYWEDKFHNDMKSLNILPPDVLTRVSEYVPQIVEFIQRIIDNKL 253
Query: 145 AYEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADF 191
AYEAN + FD +Y + + K++P DF
Sbjct: 254 AYEANGSVYFDVNGFDKREKHHYAKLVPEAYGDTQSLQEGEGDLSVTEERLSEKRSPNDF 313
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWGRGRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQ
Sbjct: 314 ALWKTSKAGEPWWDSPWGRGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQ 373
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + ++H G L + G KMSKS NFITI E L A +RLA
Sbjct: 374 SEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFITIQEALT-------KHSATQLRLAF 426
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------------------------- 344
L+ +++ +D++ + A + +
Sbjct: 427 LLHSWKDTLDYSENTMEMATQFEKFLNEFFLNVKDLTRQVLSGEPIKQFSNWTPLEASLQ 486
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
G + +AL ++++T SA+ + +L + +
Sbjct: 487 TKFGETQAQIHAALCDNIDTRSALDYVRELVSTTNIYIRDNKARLNNLLLRKIATYITDL 546
Query: 389 AHILG------------IEVCKEHLNKNISIA-------IEKLVQERL----ILLKMKKF 425
HI G + + + + ++ + R +K F
Sbjct: 547 LHIFGAINGARGGIGFPLSGSSDSNSGESTDLESIVMPYVQSAAEFRNLVREQAKALKAF 606
Query: 426 ---SSADYIRKQ-LESKGFILEDYKNPD 449
D +R L + G LED +
Sbjct: 607 DILKLCDDLRDDVLPNLGVRLEDKDDGT 634
>gi|75075917|sp|Q4R550|SYCC_MACFA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|67970866|dbj|BAE01775.1| unnamed protein product [Macaca fascicularis]
Length = 748
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V Y NITDIDDKII+RARQ H
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHL 111
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/436 (25%), Positives = 171/436 (39%), Gaps = 85/436 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
++ + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSDGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTITGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615
Query: 430 YIRKQ-LESKGFILED 444
+R L G ED
Sbjct: 616 ALRDDILPELGVRFED 631
>gi|297687904|ref|XP_002821439.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
[Pongo abelii]
gi|297687906|ref|XP_002821440.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 3
[Pongo abelii]
Length = 748
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|224011277|ref|XP_002295413.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|209583444|gb|ACI64130.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 322
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 96/322 (29%), Positives = 140/322 (43%), Gaps = 57/322 (17%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLR--YYYGEKCVT----YVRNITDIDDKIIE 81
Y+CGPTVYD AH+G+ R ++ D+L R+ + +T YV N+TD+DDKII+
Sbjct: 1 WYICGPTVYDSAHLGHGRTYVLLDILRRVAINLHKGSASHLTPPPLYVMNVTDVDDKIIQ 60
Query: 82 RARQEHPSIPINDAISI-----ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYL 135
R+ + + + +F +D RL L P R + H+ ++
Sbjct: 61 RSMENASQQSTTSTVQEADPLSLARHFEAEFWQDMDRLNVLRPDIVCRVSEHVESTIVPY 120
Query: 136 IQNIILHGHAY---------EANNEIIFDTSSIPNYGS--------FSRRKIDEQKMGTR 178
I+ I+ G AY + N + FD + + S +
Sbjct: 121 IEQILKGGMAYVIPEGDDNTQQNGSVYFDVRAFESLTSGRTKYGKLAPDVASSDFFSLEA 180
Query: 179 VPEKYHKKNPAD------------FILWKRST-----------PMEPGWESPWGRGRPGW 215
+ F LWK + P ++SPWG GRPGW
Sbjct: 181 ADADENNSEGQHVSLIRKKRDPRDFCLWKYRSRTQNNKSTVIEPASVSFKSPWGFGRPGW 240
Query: 216 HIECSAMSSHYLGK-----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
H+ECSAM F +H GG+DL FPHH NEIAQ+ ++ W+H G
Sbjct: 241 HVECSAMIQRLAEDFSYTHQFQLHAGGIDLKFPHHSNEIAQAEAYGDWKEWIPHWVHTGH 300
Query: 271 LNLEGRKMSKSNGNFITINELL 292
L ++GRKMSKS NF+TI E+L
Sbjct: 301 LYVKGRKMSKSLKNFVTIREML 322
>gi|109105039|ref|XP_001096538.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 5 [Macaca
mulatta]
Length = 748
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 55/85 (64%), Gaps = 1/85 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V Y NITDIDDKII+RARQ H
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHL 111
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|114635636|ref|XP_001156397.1| PREDICTED: cysteinyl-tRNA synthetase isoform 8 [Pan troglodytes]
gi|332835579|ref|XP_001155829.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Pan
troglodytes]
Length = 748
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|21269877|ref|NP_644802.1| cysteinyl-tRNA synthetase, cytoplasmic isoform a [Homo sapiens]
gi|9837517|gb|AAG00579.1|AF288207_1 cysteinyl-tRNA synthetase [Homo sapiens]
gi|119622943|gb|EAX02538.1| cysteinyl-tRNA synthetase, isoform CRA_c [Homo sapiens]
Length = 726
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDNILPELGVRFEDHEG 634
>gi|195583830|ref|XP_002081719.1| GD11166 [Drosophila simulans]
gi|194193728|gb|EDX07304.1| GD11166 [Drosophila simulans]
Length = 741
Score = 167 bits (422), Expect = 4e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIRRARQNHL 102
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 115/445 (25%), Positives = 170/445 (38%), Gaps = 89/445 (20%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ I N + QF D L L P R + ++PQ++ IQ II +G A
Sbjct: 194 KGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLA 253
Query: 146 YEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFI 192
Y ANN + FD +Y + K K++ DF
Sbjct: 254 YAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSAAEDRLSEKRSANDFA 313
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQS
Sbjct: 314 LWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQS 373
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A + ++H G L + G KMSKS NF+TI E L + A +RLA L
Sbjct: 374 EAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFL 426
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----------------- 355
+ +++ +D++ + A + + + VLS
Sbjct: 427 LHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQK 486
Query: 356 -------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
++++T SA+ A+ +L S ++
Sbjct: 487 KFSNAQVLVHASLCDNIDTRSALDAIRELVSVSNVYIRDNKTRLNSLLLRNVATYITDLL 546
Query: 390 HILG------------IEVCKEHLNKNISIA------IEKLVQ----ERLILLKMKKF-- 425
H+ G + + ++ L + R +K F
Sbjct: 547 HVFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDI 606
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 607 LKLCDDLRDNVLPNLGVRLEDKDIG 631
>gi|148686273|gb|EDL18220.1| cysteinyl-tRNA synthetase, isoform CRA_b [Mus musculus]
Length = 473
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 97.1 bits (240), Expect = 5e-18, Method: Composition-based stats.
Identities = 68/178 (38%), Positives = 93/178 (52%), Gaps = 13/178 (7%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQ
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQ 463
>gi|73982657|ref|XP_533205.2| PREDICTED: similar to cysteinyl-tRNA synthetase isoform b isoform 1
[Canis familiaris]
Length = 748
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 28 KLRLYNSLTRNKDVFIPQHGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFG 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII+RARQ + +
Sbjct: 87 YDVFYCMNITDVDDKIIKRARQNYLFEEYRE 117
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 108/439 (24%), Positives = 176/439 (40%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTVKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLT---------------------EAEILLSKWPQTSTSKGIIDPAVL 352
+++ +D++ + + ++ + + ++ +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDLLRAPVDISGRFEKWEDEESELNKSFY 495
Query: 353 SAL-------YNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
++++T + ++ + L + +
Sbjct: 496 DKKAAVHEALCDNVDTRTVLEEMRALVSQCNLYMATRKAARRRPNRALLESIALYLTRML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESSLGFPVRGPGTSPDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 616 ALRDDILPELGVRLEDHEG 634
>gi|194882631|ref|XP_001975414.1| GG20575 [Drosophila erecta]
gi|190658601|gb|EDV55814.1| GG20575 [Drosophila erecta]
Length = 741
Score = 167 bits (422), Expect = 5e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIRRARQNHL 102
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 115/445 (25%), Positives = 170/445 (38%), Gaps = 89/445 (20%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ I N + QF D L L P R + ++PQ++ IQ II +G A
Sbjct: 194 KGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLA 253
Query: 146 YEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFI 192
Y ANN + FD +Y + K K++ DF
Sbjct: 254 YAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFA 313
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQS
Sbjct: 314 LWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQS 373
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A + ++H G L + G KMSKS NF+TI E L + A +RLA L
Sbjct: 374 EAAFNEAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFL 426
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----------------- 355
+ +++ +D++ + A + + + VLS
Sbjct: 427 LHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQK 486
Query: 356 -------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
++++T SA+ A+ +L S ++
Sbjct: 487 KFSNSQVQVHAALCDNIDTRSALDAIRELVSASNVYIRDNKTRLNSLLLRNVATYITDLL 546
Query: 390 HILG------------IEVCKEHLNKNISIA------IEKLVQERL----ILLKMKKF-- 425
H+ G + + ++ L + R +K F
Sbjct: 547 HVFGAISGPRGGIGFPVTGGSGAQAAGADLETTVLPYVQSLAEFRNLVREQAKTLKAFDI 606
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 607 LKLCDDLRDNVLPNLGVRLEDKDGG 631
>gi|114635650|ref|XP_001156338.1| PREDICTED: cysteinyl-tRNA synthetase isoform 7 [Pan troglodytes]
Length = 683
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|19922364|ref|NP_611087.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
gi|122087256|sp|Q7KN90|SYCC_DROME RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|4972706|gb|AAD34748.1| unknown [Drosophila melanogaster]
gi|7302987|gb|AAF58057.1| Cysteinyl-tRNA synthetase [Drosophila melanogaster]
gi|220943686|gb|ACL84386.1| Aats-cys-PA [synthetic construct]
Length = 741
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIRRARQNHL 102
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 115/445 (25%), Positives = 170/445 (38%), Gaps = 89/445 (20%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ I N + QF D L L P R + ++PQ++ IQ II +G A
Sbjct: 194 KGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLA 253
Query: 146 YEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFI 192
Y ANN + FD +Y + K K++ DF
Sbjct: 254 YAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSANDFA 313
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQS
Sbjct: 314 LWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGPTFDIHTGGVDLKFPHHDNELAQS 373
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A + ++H G L + G KMSKS NF+TI E L + A +RLA L
Sbjct: 374 EAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFL 426
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----------------- 355
+ +++ +D++ + A + + + VLS
Sbjct: 427 LHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQK 486
Query: 356 -------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
++++T SA+ A+ +L S ++
Sbjct: 487 KFSNAQVQVHASLCDNIDTRSALDAIRELVSVSNVYIRDNKTRLNSLLLRNVATYITDLL 546
Query: 390 HILG------------IEVCKEHLNKNISIA------IEKLVQ----ERLILLKMKKF-- 425
H+ G + + ++ L + R +K F
Sbjct: 547 HVFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDI 606
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 607 LKLCDDLRDNVLPNLGVRLEDKDIG 631
>gi|195334811|ref|XP_002034070.1| GM21666 [Drosophila sechellia]
gi|194126040|gb|EDW48083.1| GM21666 [Drosophila sechellia]
Length = 741
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 44/87 (50%), Positives = 60/87 (68%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+K++N+L R+ +F +D +N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 17 RPKLKLFNSLTRQKEDFVPLDGNNVTWYSCGPTVYDASHMGHARSYISFDILRRILSD-Y 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII RARQ H
Sbjct: 76 FGYNIHYVMNITDIDDKIIRRARQNHL 102
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 115/445 (25%), Positives = 169/445 (37%), Gaps = 89/445 (20%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ I N + QF D L L P R + ++PQ++ IQ II +G A
Sbjct: 194 KGAQINDNAVFEALPRYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVTFIQKIIDNGLA 253
Query: 146 YEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFI 192
Y ANN + FD +Y + K K++ DF
Sbjct: 254 YAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEKRSANDFA 313
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+AQS
Sbjct: 314 LWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHHDNELAQS 373
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
A + ++H G L + G KMSKS NF+TI E L + A +RLA L
Sbjct: 374 EAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLAFL 426
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL----------------- 355
+ +++ +D++ + A + + + VLS
Sbjct: 427 LHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSEEPRRQFDAWTEVEAALQK 486
Query: 356 -------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASA 389
++++T SA+ A+ L S ++
Sbjct: 487 KFSNAQVLVHASLCDNIDTRSALDAIRDLVTVSNVYIRDNKTRLNCLLLRNVATYITDLL 546
Query: 390 HILG------------IEVCKEHLNKNISIA------IEKLVQ----ERLILLKMKKF-- 425
H+ G + + ++ L + R +K F
Sbjct: 547 HVFGAISGPRGGIGFPVSGGSGAQAAGADLETTVLPYVQSLAEFRYLVREQAKTLKAFDI 606
Query: 426 -SSADYIRKQ-LESKGFILEDYKNP 448
D +R L + G LED
Sbjct: 607 LKLCDDLRDNVLPNLGVRLEDKDIG 631
>gi|195431327|ref|XP_002063694.1| GK15775 [Drosophila willistoni]
gi|194159779|gb|EDW74680.1| GK15775 [Drosophila willistoni]
Length = 741
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K++++N+L R+ EF + + + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 19 KLRLFNSLTRQKEEFVPLQGNTVTWYSCGPTVYDASHMGHARSYISFDILRRIL-SNYFG 77
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
+ YV NITDIDDKII+RARQ H + +
Sbjct: 78 YNIHYVMNITDIDDKIIKRARQNHLFNEYAQEAAKL 113
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 116/448 (25%), Positives = 174/448 (38%), Gaps = 89/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+Q+ I N + QF D L L P R + ++PQ++ IQ II +G
Sbjct: 192 KQKGAQINDNSVFEALPQYWEDQFHNDMKSLNILPPDVLTRVSEYVPQIVAFIQRIIDNG 251
Query: 144 HAYEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPAD 190
AY AN+ + FD +Y + K K++ D
Sbjct: 252 LAYAANSSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSIAEDRLSEKRSAND 311
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W+SPWGRGRPGWHIECSAM+S G FDIH GG+DL FPHH+NE+A
Sbjct: 312 FALWKASKAGEPWWDSPWGRGRPGWHIECSAMASDVFGSQFDIHTGGVDLKFPHHDNELA 371
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS A + ++H G L + G KMSKS NF+TI E L + A +RLA
Sbjct: 372 QSEAAFNEAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSATQLRLA 424
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL--------------- 355
L+ +++ +D++ + A + + + VLS
Sbjct: 425 FLLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLSDEPRKQFDAWSEVEAAL 484
Query: 356 ---------------YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNA 387
++++T SA+ + +L S ++
Sbjct: 485 QKKFASSQEQVHVALCDNIDTRSALDVIRELVSASNVYIRDNKTRLNSLLLRNIATYITD 544
Query: 388 SAHILGI------------------EVCKEHLNKNISIAIEKLVQERLILLKM----KKF 425
H+ G + L + ++ L + R ++ + K F
Sbjct: 545 LLHVFGAIAGPRGGIGFPMSGGQSTNGSNQDLETTLLPYVQSLAEFRNVVREQAKVLKAF 604
Query: 426 ---SSADYIRK-QLESKGFILEDYKNPD 449
D +R L + G LED
Sbjct: 605 DILKLCDDLRDNILPNLGVRLEDKDGGQ 632
>gi|169646833|ref|NP_001112372.1| cysteinyl-tRNA synthetase, cytoplasmic [Danio rerio]
Length = 824
Score = 166 bits (421), Expect = 5e-39, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+++YN+L R F + + Y CGPTVYD +H+G+AR I FD+L R+L+ Y
Sbjct: 105 SKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILK-NYF 163
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+ V Y NITDIDDKII+RARQ + +
Sbjct: 164 KYDVFYCMNITDIDDKIIKRARQNYLLEQYRE 195
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 110/437 (25%), Positives = 171/437 (39%), Gaps = 85/437 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S++ ++ KD L L P R + ++P+++ ++ I+ +G+ Y
Sbjct: 281 GSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGY 340
Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
E+N + FDT+ +Y + +QK K++ DF L
Sbjct: 341 ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFAL 400
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 401 WKASKPGEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 460
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L A +RLA LM
Sbjct: 461 AYFENDYWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALA-------KHTARQLRLAFLM 513
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAVLSAL------- 355
+++ +D+ +R L K + G + +
Sbjct: 514 HSWKDTLDYSNNTMESAIQYERFINEFFLNVKDILRSPTDITGQYEKWEAEEIELNKCFY 573
Query: 356 ----------YNDLNTVSAIQALHKLARESTKNHDLL--------------------PIF 385
++++T SA++ + L +S +
Sbjct: 574 DKKTSVHGALCDNIDTRSALEEMRALVGQSNTYMAARRSAKLPPNRMLLQSIALYLTDML 633
Query: 386 NASAHI-----LGIEVCKEHLNKNISIAI--------EKLVQERLILLKMK---KFSSAD 429
I +G V + ++ + + R I + K D
Sbjct: 634 KTFGAIEGTDPIGFPVGGNGQSADLESTVMPYLSVLSDFREDVRKIAREKKVTELLQLCD 693
Query: 430 YIRKQ-LESKGFILEDY 445
+R L G LED
Sbjct: 694 QLRDDTLPELGVRLEDR 710
>gi|157074020|ref|NP_001096719.1| cysteinyl-tRNA synthetase, cytoplasmic [Bos taurus]
gi|133777443|gb|AAI14706.1| CARS protein [Bos taurus]
gi|296471434|gb|DAA13549.1| cysteinyl-tRNA synthetase [Bos taurus]
Length = 832
Score = 166 bits (421), Expect = 6e-39, Method: Composition-based stats.
Identities = 42/92 (45%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R+ F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 112 QLRLYNSLTRRKDVFVPQDGRRVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFK 170
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDA 95
V Y NITDIDDKII+RARQ +
Sbjct: 171 FDVFYCMNITDIDDKIIKRARQNFLLERYRET 202
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 113/439 (25%), Positives = 174/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 287 GSEVTDNSIFSELPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVQKIVDNGYGY 346
Query: 147 EANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FD + +YG + +QK K++P DF L
Sbjct: 347 ASNGSVYFDTVKFANTEGHSYGKLVPEAVGDQKALHEGEGDLSVSAERLSEKRSPNDFAL 406
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 407 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 466
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 467 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 519
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKGI--- 346
+++ +D++ + E KW T
Sbjct: 520 HSWKDTLDYSANTMESALQYERLLNEFFLNVKDLLRAPVEVAAQFEKWEDEETELNKSFY 579
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AV AL ++++T + ++ + L + +
Sbjct: 580 KKKAAVHQALCDNIDTRTVLEEMRALVGQCNLYMAARKAARRRPHRVLLESIAHYLTHML 639
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKK---FSSAD 429
I LG + + N+ + + L + R I + + +D
Sbjct: 640 KIFGAIEEESSLGFPIGGAGTSLNLESTVMPYLQVLSEFREGVRRIAREHRVPEVLQLSD 699
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 700 ALRDNVLPELGVRLEDHEG 718
>gi|28856175|gb|AAH48039.1| Cars protein [Danio rerio]
Length = 652
Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats.
Identities = 41/92 (44%), Positives = 57/92 (61%), Gaps = 1/92 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+++YN+L R F + + Y CGPTVYD +H+G+AR I FD+L R+L+ Y
Sbjct: 26 SKLRLYNSLTRTKEVFVPQKGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILK-NYF 84
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+ V Y NITDIDDKII+RARQ + +
Sbjct: 85 KYDVFYCMNITDIDDKIIKRARQNYLLEQYRE 116
Score = 145 bits (366), Expect = 2e-32, Method: Composition-based stats.
Identities = 111/445 (24%), Positives = 173/445 (38%), Gaps = 85/445 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S++ ++ KD L L P R + ++P+++ ++ I+ +G+ Y
Sbjct: 202 GSQVTENSIFSLLPKYWEGEYHKDMEALNVLPPDVLTRVSEYVPEIVEFVKKIVDNGYGY 261
Query: 147 EANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
E+N + FDT+ +Y + +QK K++ DF L
Sbjct: 262 ESNGSVYFDTAKFDSCPAHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKRSQNDFAL 321
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 322 WKASKPGEPSWDSPWGMGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 381
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L A +RLA LM
Sbjct: 382 AYFESDYWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALA-------KHTARQLRLAFLM 434
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAVLSAL------- 355
+++ +D+ +R L K + G + +
Sbjct: 435 HSWKDTLDYSNNTMESAIQYERFINEFFLNVKDILRSPTDITGQYEKWEAEEIELNKCFY 494
Query: 356 ----------YNDLNTVSAIQALHKLARESTKNHDLL--------------------PIF 385
++++T SA++ + L +S +
Sbjct: 495 DKKTSVHGALCDNIDTRSALEEMRALVGQSNTYMAARRSAKLPPNRMLLQSIALYLTDML 554
Query: 386 NASAHI-----LGIEVCKEHLNKNISIAI--------EKLVQERLILLKMK---KFSSAD 429
I +G V + ++ + + R I + K D
Sbjct: 555 KTFGAIEGTDPIGFPVGGNGQSADLESTVMPYLSVLSDFREDVRKIAREKKVTELLQLCD 614
Query: 430 YIRKQ-LESKGFILEDYKNPDNGQR 453
+R L G LED P +
Sbjct: 615 QLRDDTLPELGVRLEDRDGPPTSVK 639
>gi|312374234|gb|EFR21828.1| hypothetical protein AND_16292 [Anopheles darlingi]
Length = 744
Score = 166 bits (420), Expect = 7e-39, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F D N++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 PRLHLYNSLTRRKELFVPRDGRNVQWYSCGPTVYDASHMGHARSYISFDILRRVLSD-YF 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
V YV NITDIDDKII+RARQ H + +
Sbjct: 77 GYNVLYVMNITDIDDKIIKRARQNHLYEQYLEEAKAV 113
Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats.
Identities = 113/452 (25%), Positives = 168/452 (37%), Gaps = 91/452 (20%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ S+ N + +F KD L L R + ++P+++ I+ II G
Sbjct: 193 KRGSSVTENAIFETLPRYWEDEFHKDMRALNVLPADVLTRVSEYVPEIVTYIERIIERGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AYEAN + FD + K+ + G + K++P DF
Sbjct: 253 AYEANGSVYFDVARFDGRPEHHYAKLVPEAYGDARQLQEGEGDLSTGEDRLGEKRSPNDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWG+GRPGWHIECSAM+S G DIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKASKAGEPWWDSPWGKGRPGWHIECSAMASAICGDYLDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S D + ++H G L + G KMSKS NF+TI + LE A +RLA
Sbjct: 373 SEAHDGSSEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQALERHT-------ATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLTE--------------------------AEILLSKWPQTSTSK- 344
L+ +++ +D++ + +W
Sbjct: 426 LLHSWKDTLDYSDNTMEMAVQYERLLNEFFLNVKDLTRHVVAGKPRDAFDRWTPVEAELE 485
Query: 345 ---GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL--------- 392
G AV AL ++++T SA+ A+ L +L
Sbjct: 486 RKFGETKAAVHEALCDNVDTRSALDAIRGLVSLCNVYIKEHRTSRTLNALLLRRIASYCT 545
Query: 393 ----------------GIEVCKEHLNKNISIAIEKLV------------QERLILLKMK- 423
G + + +E+ V R +K
Sbjct: 546 DLLHIFGAIEGPRGGIGFPIASGSAGNAGPVDLEQTVMPYLSTLAEFRTAVREQARTLKA 605
Query: 424 -K-FSSADYIRKQLE-SKGFILEDYKNPDNGQ 452
D +R L + G LED +
Sbjct: 606 TDILKLCDALRDDLLPALGVRLEDRDDGTPSA 637
>gi|316970881|gb|EFV54739.1| cysteinyl-tRNA synthetase, cytoplasmic [Trichinella spiralis]
Length = 786
Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats.
Identities = 51/200 (25%), Positives = 85/200 (42%), Gaps = 3/200 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L RK F + + Y+CGPTVYD AH+G+AR I FD+L R+L++ Y
Sbjct: 29 LKLYNSLTRKKEIFIPRHGNQVNWYICGPTVYDAAHMGHARSYISFDILRRVLQH-YFGY 87
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITS--KNTQQFVKDTTRLACLAPTHQ 122
V +V N+TDIDDKII RARQ H D+ + ++ + ++ + P
Sbjct: 88 DVLFVMNVTDIDDKIIVRARQRHLFQNYLDSAPSVEKMMRDVKSALEMYKKKFETEPNVD 147
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+A + + ++ + K+ + +
Sbjct: 148 KKAMLLGQIQKVETVVQQAKNDSDKEEYCKNLANNASEVLSQWLDSKLGNTITDHSIFDS 207
Query: 183 YHKKNPADFILWKRSTPMEP 202
+ DF L + + P
Sbjct: 208 LARHFEQDFDLDMAALNVLP 227
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 114/452 (25%), Positives = 172/452 (38%), Gaps = 100/452 (22%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+I + + Q F D L L P R + +IP+++ + ++ G AY
Sbjct: 196 GNTITDHSIFDSLARHFEQDFDLDMAALNVLPPDVVTRVSEYIPEVVAFVDGLVKRGFAY 255
Query: 147 EANNEIIFDT-SSIPNYGSFSRRKIDEQKMGTRVPEK-------------YHKKNPADFI 192
E + FDT + G R + E T + + K+ DF
Sbjct: 256 EVQGSVYFDTVTFGRTDGHRYGRLLPEAVQDTSLLVEGEGELSLGDENQARQKRFSGDFA 315
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP W SPWG GRPGWHIECSAM+S G+ D+H GG DL FPHH+NE+AQS
Sbjct: 316 LWKASKPGEPAWPSPWGPGRPGWHIECSAMASAICGEQLDVHAGGFDLKFPHHDNELAQS 375
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++H G L ++G KMSKS NF+TI + L + + + IRL L
Sbjct: 376 EAYHGHAPWVRYFLHAGTLRIQGLKMSKSLKNFVTIKQAL-------QQYTSRQIRLLFL 428
Query: 313 MTHYREPIDFTVQRLTEAEIL-------------LSKWPQTSTSKGII------------ 347
M ++ EP+D++ Q + +A + + G
Sbjct: 429 MHNWAEPLDYSPQTMEKALHFERICQQFSRTVAHYLRRYFSRGKAGSYAKLTADELRLLQ 488
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASA 389
AV AL + ++T +A++ + +L D N
Sbjct: 489 ALQTCKQAVHDALCDSVDTRTALEHIRELIGHVNVYLDSSSAVPNCLLLRNSAIYVNHML 548
Query: 390 HILGIEVCKEHLNKNISIAIE--------------------------KLVQERLILL-KM 422
+ G ++ S I+ L R ++ +
Sbjct: 549 KLFG--AAGSDADEIGSRTIDYSCGFGDKGDVNSDCANESLLMPCLNALADFREVVRSEA 606
Query: 423 K------KFSSADYIRKQ-LESKGFILEDYKN 447
K D IR + L + G +LED K
Sbjct: 607 KIHGVQALLKECDRIRDEILPNMGVLLEDRKG 638
>gi|147899657|ref|NP_001080786.1| cysteinyl-tRNA synthetase, cytoplasmic [Xenopus laevis]
gi|82241490|sp|Q7ZWR2|SYCC_XENLA RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|28436794|gb|AAH46746.1| Cars-prov protein [Xenopus laevis]
Length = 747
Score = 166 bits (419), Expect = 9e-39, Method: Composition-based stats.
Identities = 42/94 (44%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YN+L R F + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 25 QPGLRLYNSLTRSKELFFPQVGRKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-Y 83
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDA 95
+ V Y NITDIDDKII+RARQ H ++
Sbjct: 84 FKYDVFYCMNITDIDDKIIKRARQRHLFQQYRES 117
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I N S + ++ KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 202 GAQIADNSIFSQLPKYWEGEYHKDMEALNVLTPDVLTRVSEYVPEIVAFVQKIVDNGYGY 261
Query: 147 EANNEIIF-----DTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + F S Y + +QK K++P DF L
Sbjct: 262 VSNGSVYFSTAKFHDSENHFYAKLVPEAVGDQKALQEGEGDLSISADRLSEKQSPNDFAL 321
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP WESPWG+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 322 WKASKPGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 381
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L+ A +RLA LM
Sbjct: 382 AYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDALQKNT-------ARQLRLAFLM 434
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKGII-- 347
+++ +D++ + + KW
Sbjct: 435 HSWKDTLDYSNNTMESAVQYEKFMNEFFLNVKDLLRAPTDITGQFVKWEVLEIELNNCFY 494
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
A+ AL ++++T + ++ + L + + +
Sbjct: 495 SKKAAIHEALCDNIDTRTVMEEMRSLVSQCNSYIASKKVAKQFPNRMLLRSISSYLTSML 554
Query: 390 HILGIEVCKE---------HLNKNISIAIEKLVQE--------RLILLKMKK---FSSAD 429
+ G +E + N+ + +Q R I + K +D
Sbjct: 555 KVFGAIEGEEVIGFPIGGSENSMNLESTVMPYLQVLSQFREGVRQIARQHKVTEVLQLSD 614
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G LED++
Sbjct: 615 LLRDDILPELGVRLEDHEG 633
>gi|149061783|gb|EDM12206.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 831
Score = 166 bits (419), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 174/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AL ++++T + ++ + L + ++
Sbjct: 579 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 639 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|11191800|emb|CAC16398.1| Cysteinyl-tRNA-synthetase [Mus musculus domesticus]
gi|148686272|gb|EDL18219.1| cysteinyl-tRNA synthetase, isoform CRA_a [Mus musculus]
Length = 831
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 140 bits (354), Expect = 4e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|74183161|dbj|BAE22530.1| unnamed protein product [Mus musculus]
Length = 831
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 113/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSY 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|148747198|ref|NP_038770.3| cysteinyl-tRNA synthetase, cytoplasmic [Mus musculus]
gi|47117033|sp|Q9ER72|SYCC_MOUSE RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|11191806|emb|CAC16403.1| CysRS protein [Mus musculus]
gi|32493323|gb|AAH54717.1| Cysteinyl-tRNA synthetase [Mus musculus]
gi|37748375|gb|AAH58954.1| Cysteinyl-tRNA synthetase [Mus musculus]
Length = 831
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|62896787|dbj|BAD96334.1| cysteine-tRNA ligase isoform a variant [Homo sapiens]
Length = 726
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++ +YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y +
Sbjct: 28 RLHLYNSLTRNKEVFMPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFK 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ H +
Sbjct: 87 FDVFYCMNITDIDDKIIKRARQNHLFEQYRE 117
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNSVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 495
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 496 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 556 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 615
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDNILPELGVRFEDHEG 634
>gi|148686274|gb|EDL18221.1| cysteinyl-tRNA synthetase, isoform CRA_c [Mus musculus]
Length = 748
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 28 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 87 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|26332072|dbj|BAC29766.1| unnamed protein product [Mus musculus]
gi|74225237|dbj|BAE31556.1| unnamed protein product [Mus musculus]
Length = 748
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 28 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 87 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|157821465|ref|NP_001099789.1| cysteinyl-tRNA synthetase, cytoplasmic [Rattus norvegicus]
gi|149061784|gb|EDM12207.1| cysteinyl-tRNA synthetase (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 748
Score = 165 bits (418), Expect = 1e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 28 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 87 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117
Score = 140 bits (352), Expect = 5e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 174/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AL ++++T + ++ + L + ++
Sbjct: 496 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|26328991|dbj|BAC28234.1| unnamed protein product [Mus musculus]
Length = 831
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 111 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 170 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 200
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSKLPKFWEEEFHKDKEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 578
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 579 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|187468988|gb|AAI66707.1| Cars protein [Rattus norvegicus]
Length = 655
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 28 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 87 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 174/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGSLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AL ++++T + ++ + L + ++
Sbjct: 496 DKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAARRRPNRALLENIAMYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEENPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|26346422|dbj|BAC36862.1| unnamed protein product [Mus musculus]
Length = 649
Score = 165 bits (417), Expect = 2e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F D + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 28 RLRLYNSLTRNKDVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQ 86
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII RARQ + +
Sbjct: 87 YDVFYCMNITDIDDKIIRRARQNYLFEQYRE 117
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 203 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 263 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 436 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 495
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 496 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 555
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 556 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|315301166|ref|ZP_07872435.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
gi|313630469|gb|EFR98333.1| cysteinyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
Length = 107
Score = 164 bits (416), Expect = 2e-38, Method: Composition-based stats.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+I+FD + R Y
Sbjct: 1 MSIQIFNTLKREKEPFKPLRDGEVKMYVCGPTVYNYIHIGNARPIIIFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
+ V +V N TD+DDK+I A + ++P + + + D +L
Sbjct: 61 D--VKFVSNFTDVDDKLIHAANELKLTVP------EVADRFIGAYFNDVDQLNV 106
>gi|242022617|ref|XP_002431736.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
gi|212517051|gb|EEB18998.1| Cysteinyl-tRNA synthetase, putative [Pediculus humanus corporis]
Length = 728
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 69/369 (18%), Positives = 114/369 (30%), Gaps = 25/369 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+ R+ F + + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 20 LKLYNSFTRQKEIFIPNVGNRVLWYSCGPTVYDASHMGHARTYISFDILRRVLT-EYFGY 78
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDA-----ISIITSKNTQQFVKDTTRLACLAP 119
V YV NITDIDDKII +ARQE+ + I+T + P
Sbjct: 79 DVQYVMNITDIDDKIIRKARQEYLFTEYTTSSSKSVEEILTDAKSVLKWAVDQEKNINDP 138
Query: 120 THQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+ + ++ I+ + +A E + + + +
Sbjct: 139 DKKTMFAKMVQKLEAAIKVLENSTNAKEG-----INVKDKLKVFFLDGKDLISNWLDQIK 193
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ L K S P S Y+ +V + +D
Sbjct: 194 GHDVSDHSIF-SSLSKFWESAFHKDMSDLNVLPPDVLTR----VSEYIPEVIEYIKKIID 248
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
F +H N A+ + + K + +L T +
Sbjct: 249 NGFAYHSNGSVYFDVANFDTNKKHFYAKLVPEAYGDSKSLQEGE-----GDLSSTDERTS 303
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA----VLSAL 355
L + R + ++ ID L
Sbjct: 304 EKKSINDFALWKNSKSGEPWWESPWGRGRPGWHIECSVMASAICGSNIDIHTGGVDLKFP 363
Query: 356 YNDLNTVSA 364
++D A
Sbjct: 364 HHDNEIAQA 372
Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 100/417 (23%), Positives = 155/417 (37%), Gaps = 58/417 (13%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+ + + S ++ F KD + L L P R + +IP++I I+ II +G A
Sbjct: 193 KGHDVSDHSIFSSLSKFWESAFHKDMSDLNVLPPDVLTRVSEYIPEVIEYIKKIIDNGFA 252
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKID-------------EQKMGTRVPEKYHKKNPADFI 192
Y +N + FD ++ K+ E + + KK+ DF
Sbjct: 253 YHSNGSVYFDVANFDTNKKHFYAKLVPEAYGDSKSLQEGEGDLSSTDERTSEKKSINDFA 312
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP WESPWGRGRPGWHIECS M+S G DIH GG+DL FPHH+NEIAQ+
Sbjct: 313 LWKNSKSGEPWWESPWGRGRPGWHIECSVMASAICGSNIDIHTGGVDLKFPHHDNEIAQA 372
Query: 253 CCADRIEKTANIWIHNGFLNLEGRK-MSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
N ++H+G L + G K K N L + + +++
Sbjct: 373 EAYFGSNNWINYFLHSGHLTISGCKICIKKNSARQLRIAFLLHSWKDTLDYSPKTMEMSV 432
Query: 312 LMTHYREPIDFTVQ------RLTEAEILLSKWPQTSTSK----GIIDPAVLSALYNDLNT 361
V+ KW + + SAL ++++T
Sbjct: 433 QYEKLLNEFFLNVKDLLRHFSKENECDFFVKWSDSELELNSKFENSKCRIHSALCDNIDT 492
Query: 362 VSAIQALHKLARESTKN------------HDLLPIFNASAHILGIEVCK----------E 399
+ + + + ++ I G+ K E
Sbjct: 493 KTVLDIVRDTIGYTNVYLRDVKSPNMVLIQNIAQYLTKIFSIFGVIDFKNSIGFSSSKGE 552
Query: 400 HLNKNISIAI----EKLVQERLILLK-MKKFS------SADYIRKQ-LESKGFILED 444
+++ + I L + R + K K D +R L + G LED
Sbjct: 553 NVSASNDEVIMPYLNILSEFRDCVRKEAKILKSTTILQECDKLRDDILPNVGVRLED 609
>gi|284990719|ref|YP_003409273.1| cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
gi|284063964|gb|ADB74902.1| Cysteine--tRNA ligase [Geodermatophilus obscurus DSM 43160]
Length = 391
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 103/351 (29%), Positives = 161/351 (45%), Gaps = 17/351 (4%)
Query: 19 QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK 78
+ R+YVCG T YD H+G+A + DVL +LR + V RN+TD+DD
Sbjct: 36 VPVTSP-ARVYVCGITPYDVTHLGHAATFVWADVLGSVLRLAGAD--VVTSRNVTDVDD- 91
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ RA F +D L PTH PRA +H+ + L
Sbjct: 92 VLTRAA-----DARGRHFDEFALGQEFAFEQDLRALGVRPPTHVPRARHHVTHVQQLAAA 146
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT-RVPEKYHKKNPADFILWKRS 197
++ G AYE + F + + + E P+ +++P D +W+ S
Sbjct: 147 LLQAGRAYEREGHVFFRGAGVVGASGLDAGRARELAAEFGDDPDDPLREDPFDVPVWRPS 206
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+P W SPWG GRPGWH EC+AM++ LG+ D+ GG DL FPHH ++ A + A
Sbjct: 207 GERDPAWPSPWGWGRPGWHAECAAMATATLGRGVDVLVGGADLAFPHHAHQAAMAEAASG 266
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ A +H G ++ +G KM+KS GN +++LL R PV+RL +L +
Sbjct: 267 VAPFARSRVHVGAVSQDGAKMAKSTGNLTLVSDLL-------RGTTGPVLRLLVLDRPWS 319
Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
+P ++ + L A L + + G A + + L+ + AL
Sbjct: 320 QPWEYRPELLETASARLDELFAAAGRPGSSPAASRAVVDRLLDDLDVSAAL 370
>gi|194218608|ref|XP_001492545.2| PREDICTED: similar to CysRS protein [Equus caballus]
Length = 868
Score = 164 bits (415), Expect = 3e-38, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YN+L R F + Y CGPTVYD +H+G+AR I FD+L R+LR Y +
Sbjct: 147 RLRLYNSLTRNKDVFIPQSGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFK 205
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RARQ + +
Sbjct: 206 FDVFYCMNITDIDDKIIKRARQNYLFEQYRE 236
Score = 139 bits (350), Expect = 8e-31, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 323 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 382
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q+ K++P DF L
Sbjct: 383 ASNGSVYFDTVKFASSEKHSYGKLVPEAVGDQRALQEGEGDLSISADRLSEKRSPNDFAL 442
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 443 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 502
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 503 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 555
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 556 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEDEEAELNKSFY 615
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AL ++++T + ++ + L + +
Sbjct: 616 DRKTAVHEALCDNVDTRTVLEEMRALVGQCNLYMASRKAVRRRPNRALLESIALYLTHML 675
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + N+ + + L + R I + K +D
Sbjct: 676 KIFGAIEENSMLGFPVGGPGGSLNLESTVMPYLQVLSEFREGVRKIARERKVAEVLQLSD 735
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 736 ALRDDILPELGVRFEDHEG 754
>gi|301791662|ref|XP_002930799.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
[Ailuropoda melanoleuca]
Length = 832
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR + FD+L R+LR Y
Sbjct: 112 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLR-GYFG 170
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII RARQ + +
Sbjct: 171 YDVLYCMNITDVDDKIIRRARQNYLFEQYRE 201
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 287 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 346
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 347 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 406
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 407 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 466
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 467 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 519
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKGI--- 346
+++ +D++ + + KW
Sbjct: 520 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 579
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AV AL ++++T + ++ + L +
Sbjct: 580 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 639
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 640 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 699
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 700 ALRDDILPELGVRFEDHEG 718
>gi|301791660|ref|XP_002930798.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
[Ailuropoda melanoleuca]
Length = 831
Score = 164 bits (414), Expect = 3e-38, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR + FD+L R+LR Y
Sbjct: 111 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLR-GYFG 169
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII RARQ + +
Sbjct: 170 YDVLYCMNITDVDDKIIRRARQNYLFEQYRE 200
Score = 139 bits (351), Expect = 7e-31, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 286 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 346 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKGI--- 346
+++ +D++ + + KW
Sbjct: 519 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 578
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AV AL ++++T + ++ + L +
Sbjct: 579 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 638
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 639 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|321453850|gb|EFX65049.1| hypothetical protein DAPPUDRAFT_265305 [Daphnia pulex]
Length = 676
Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats.
Identities = 47/96 (48%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+ IYN+L RK F + +NI Y CGPTVYD +H+G+AR + FD+L R+LR Y
Sbjct: 13 KLMIYNSLTRKKEVFTPQNGNNITWYSCGPTVYDASHMGHARSYMSFDILRRVLRD-YFG 71
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
+TYV NITDIDDKII+RARQ + S +
Sbjct: 72 YDITYVMNITDIDDKIIKRARQNYLYEKYAAESSEL 107
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 109/450 (24%), Positives = 172/450 (38%), Gaps = 96/450 (21%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N + + ++F KD L L R + ++P+++ I I+ G AY
Sbjct: 188 GMDVSDNAIFASLPRYWEEEFYKDMAALNVLPADVITRVSQYVPEIVDYIAKIMERGFAY 247
Query: 147 EANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
AN + FD + Y + K KK+P DF L
Sbjct: 248 SANGSVYFDVAKFDSQKNHKYAKLVPEAYGDSKALQEGEGDLSVSEDRLSEKKSPNDFAL 307
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S EP W+SPWG+GRPGWHIECS M+S LG D H GG+DL FPHH+NE+AQS
Sbjct: 308 WKNSKSGEPSWDSPWGKGRPGWHIECSVMASAILGSSMDFHTGGVDLKFPHHDNELAQSE 367
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
++ + ++H G L ++G KMSKS NFITI + L + +R+ L+
Sbjct: 368 AYYDNDEWVSYFLHTGHLTIQGCKMSKSLKNFITIQDALSRN-------SSRELRIFFLL 420
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
++E +D++ + EA + + +
Sbjct: 421 HQWKETLDYSHSAMEEASSYEKMLREFFLNAKDLLRSGPTAAAITAQQQQQHFQKWSDAE 480
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPI 384
V A+ ++++T ++++A+ L + K +
Sbjct: 481 RELNQRFVQAKNRVRQAVCDNIDTKTSLEAIKSLISDCNKYLARMKRSANRVLIKSVAEY 540
Query: 385 FNASAHILGIEVCKEHL--------------NKNISIAI-----EKLVQERLILLK-MKK 424
I G+ K+ L N + I E L + R + K ++
Sbjct: 541 VTRLFQIFGVIEGKQTLGFPSTESSAGGPGNNDISAEEIVMPVLEALAEFREEVRKEARQ 600
Query: 425 ------FSSADYIRKQ-LESKGFILEDYKN 447
D R L S G LED +
Sbjct: 601 LGAKSVLELCDRFRDDVLPSLGVRLEDREG 630
>gi|167519473|ref|XP_001744076.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777162|gb|EDQ90779.1| predicted protein [Monosiga brevicollis MX1]
Length = 667
Score = 164 bits (414), Expect = 4e-38, Method: Composition-based stats.
Identities = 114/425 (26%), Positives = 180/425 (42%), Gaps = 68/425 (16%)
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
D ++ +F +D + L R T ++PQ++ IQ II +G AYE+
Sbjct: 154 DEFDKDIFLKLSQHWEAEFFQDMSALNVEPADVITRVTGYVPQIVAYIQRIIDNGFAYES 213
Query: 149 NNEIIFDTSSIP----------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
N + FD + + K+ G K+N +DF LWK S
Sbjct: 214 NGSVYFDVTKFRTDKDHTYAKLKPEAVGNDKLLSDGEGALSGAGSEKRNQSDFALWKASK 273
Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
P EP W SPWG+GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+AQS +
Sbjct: 274 PGEPSWTSPWGQGRPGWHIECSAMASDILGDNMDIHSGGVDLQFPHHDNELAQSEAYFQN 333
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
++ N ++H+G L++EG KMSKS NFITI + LET + A IR L+ + +
Sbjct: 334 DQWVNYFLHSGHLHIEGLKMSKSLKNFITIKQALET-------YTARQIRFMFLLHSWTD 386
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA---------------------VLSALYN 357
++++ EA++ + + + + + +AL +
Sbjct: 387 TLNYSADAFEEAQVYERVFKEFFLNIKALSREAQGRDAGEKDLLAVFETKKLAIHTALCD 446
Query: 358 DLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLN---- 402
+++T +A+Q L E + G+ E +
Sbjct: 447 NIDTATAMQHARDLVSECNTRLQSMSALTHAMRAVAEYLTRLFVCFGLIPSGEEIGFPRD 506
Query: 403 ----KNISIAIEKLV-------QERLILLKMKK---FSSADYIRKQ-LESKGFILEDYKN 447
++ +E L+ Q R + K D +R + L G LED ++
Sbjct: 507 DGTVSAEAVLMEPLLRFAELRDQIRQLARANKDKDVLELCDKVRDEALPKLGVRLEDKES 566
Query: 448 PDNGQ 452
+
Sbjct: 567 GAVVK 571
Score = 104 bits (260), Expect = 3e-20, Method: Composition-based stats.
Identities = 24/54 (44%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Query: 18 FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
F + Y CGPTVYD AH+G+AR + FD+L R+LR Y V +V N
Sbjct: 1 FVPQQGPRVTWYACGPTVYDAAHLGHARSYVSFDILRRILR-EYFGYDVQFVMN 53
>gi|281351477|gb|EFB27061.1| hypothetical protein PANDA_021387 [Ailuropoda melanoleuca]
Length = 823
Score = 163 bits (413), Expect = 4e-38, Method: Composition-based stats.
Identities = 40/91 (43%), Positives = 54/91 (59%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
K+++YN+L R F + Y CGPTVYD +H+G+AR + FD+L R+LR Y
Sbjct: 103 KLRLYNSLTRSKDVFIPQHGKKVMWYCCGPTVYDASHMGHARSYVSFDILRRVLR-GYFG 161
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITD+DDKII RARQ + +
Sbjct: 162 YDVLYCMNITDVDDKIIRRARQNYLFEQYRE 192
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 278 GSEVTDNSIFSQLPKFWEEEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 337
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 338 ASNGSVYFDTAKFASSERHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 397
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 398 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 457
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 458 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 510
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKGI--- 346
+++ +D++ + + KW
Sbjct: 511 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGRFEKWEDEELELNESFY 570
Query: 347 -IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
AV AL ++++T + ++ + L +
Sbjct: 571 DKKAAVHEALCDNVDTRTVLEEMRALVSRCNLYMAARKAARRRPNRALLESIALYLTHML 630
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 631 KIFGAIEEESSLGFPVRGPGTSLDLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 690
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 691 ALRDDILPELGVRFEDHEG 709
>gi|58393703|ref|XP_320253.2| AGAP012283-PA [Anopheles gambiae str. PEST]
gi|55234373|gb|EAA00242.2| AGAP012283-PA [Anopheles gambiae str. PEST]
Length = 743
Score = 163 bits (413), Expect = 5e-38, Method: Composition-based stats.
Identities = 45/86 (52%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K+ +YN+L R+ F D N+ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 PKLYLYNSLTRRKELFVPRDGRNVHWYSCGPTVYDASHMGHARSYISFDILRRVLSD-YF 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ H
Sbjct: 77 GYNVLYVMNITDIDDKIIKRARQNHL 102
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 115/454 (25%), Positives = 177/454 (38%), Gaps = 98/454 (21%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
++ S+ N + F KD L L P R + ++PQ++ I+ II +G
Sbjct: 193 KQGSSVTENAIFETLPRYWEDAFHKDMAALNVLQPDVLTRVSEYVPQIVTYIEKIIANGL 252
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPADF 191
AYEAN + FD + K+ + G + K++ DF
Sbjct: 253 AYEANGSVYFDVAGFDRREQHHYAKLVPEAYGDAKQLQEGEGDLSIGADRLTEKRSANDF 312
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP W+SPWGRGRPGWHIECSAM+S G DIH GG+DL FPHH+NE+AQ
Sbjct: 313 ALWKSSKAGEPWWDSPWGRGRPGWHIECSAMASDICGDYLDIHTGGVDLKFPHHDNELAQ 372
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S D + ++H G L + G KMSKS NF+TI ++LE A +RLA
Sbjct: 373 SEAHDGSAEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQQVLE-------KHTATQLRLAF 425
Query: 312 LMTHYREPIDFTVQRLTE--------------------------AEILLSKWPQTSTSKG 345
L+ +++ +D++ + A +W
Sbjct: 426 LLHSWKDTLDYSDNTMEMAVQYERFLNEFFLNVKDLTRHVQTGPARDAFDRWRPVEAELE 485
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN---------------------HD 380
A+ AL ++++T +A+ + L D
Sbjct: 486 RKFADARAAIHEALCDNVDTRTALDVMRGLVSACNVYIKEHRSAGFNALLLRRVAAYCTD 545
Query: 381 LLPIFNASA---HILGIEVCKEHLNK------NISIAI----EKLVQERLILLKMKKFSS 427
LL IF A + +G + ++ + + L + R + + +
Sbjct: 546 LLHIFGAISGPRGGIGFPISAGAAGDGTGMAGDLEQTVMPYLQALAEFRNAVREQ---AR 602
Query: 428 ----------ADYIRKQ-LESKGFILEDYKNPDN 450
D +R L G LED + +
Sbjct: 603 GLKATEILQLCDQLRDDVLPGLGVRLEDREGAPS 636
>gi|328716861|ref|XP_001946257.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 1
[Acyrthosiphon pisum]
gi|328716863|ref|XP_003246061.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 2
[Acyrthosiphon pisum]
Length = 723
Score = 163 bits (412), Expect = 5e-38, Method: Composition-based stats.
Identities = 45/102 (44%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K++N+L RK F + + + Y CGPTVYD +H+G+AR I FD+L R+L+ Y
Sbjct: 18 PRLKLFNSLTRKKEIFIPKNGNKVHWYSCGPTVYDASHMGHARSYITFDILRRVLKD-YF 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
V YV NITDIDDKII+RARQ H + + T K
Sbjct: 77 HYDVEYVMNITDIDDKIIKRARQLHL---FEEYVKTATDKQI 115
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 109/440 (24%), Positives = 176/440 (40%), Gaps = 82/440 (18%)
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
+P N + F + + L L P R + ++P+ I I+ II +G+A
Sbjct: 183 NSEDVPDNSIFESLPRFWESNFHSNMSSLNILPPDKLSRVSEYVPETIAYIETIIKNGYA 242
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKI-----------DEQKMGTRVPEKYHKKNPADFILW 194
YE+N + FD ++ + K+ + + K++P DF LW
Sbjct: 243 YESNGSVYFDVAAFDSQPIHHYAKLVPEAYGDSKSLQDGEGDLTTSAVNEKRSPNDFALW 302
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K+S EP W+SPWG+GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NEIAQ+
Sbjct: 303 KKSKKGEPWWDSPWGKGRPGWHIECSVMASCILGQTLDIHTGGIDLKFPHHDNEIAQAEA 362
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
E+ ++H+G L + G KMSKS NFITI + L ++ + +RLA L+
Sbjct: 363 YYNNEEWVRYFLHSGHLTISGCKMSKSLKNFITIEDAL-------KNNTSRQLRLAFLLH 415
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL---------------------- 352
+++ +D++ + A + + +
Sbjct: 416 SWKDTLDYSESTMESAMACEKLLNEFFLNVKNVTRRNYVDKLAIGYSKWLASEIELSKKF 475
Query: 353 --------SALYNDLNTVSAIQALHKLARESTKN--------------HDLLPIFNASAH 390
+AL ++++T + ++A+ + D+
Sbjct: 476 SLCKLNVHAALCDNIDTKAVLEAIRECISACNVYLRDCTSSAINHMLLLDIAKYITEILK 535
Query: 391 ILGIEVCKE----HLNKNISIAIEKLV------------QERLILLK--MKK-FSSADYI 431
+ GI+ E N S +E +V R I K D +
Sbjct: 536 VFGIKTADEIGFPVSEGNSSNDVETIVTPYLNILSDFRDSVRAIARSIGSKDILILCDKL 595
Query: 432 RKQ-LESKGFILEDYKNPDN 450
R + L G LED
Sbjct: 596 RDETLPDNGVRLEDADGKPT 615
>gi|167957252|ref|ZP_02544326.1| Cysteine--tRNA ligase [candidate division TM7 single-cell isolate
TM7c]
Length = 333
Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats.
Identities = 94/337 (27%), Positives = 162/337 (48%), Gaps = 38/337 (11%)
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK---RSTPMEP 202
+ + FDTS + +YG +R ID + G RV K+N DF +WK + + +
Sbjct: 7 IIEGDGLYFDTSKLNDYGKLARLDIDGLEAGARVSV-EGKRNITDFAIWKFSPKDSQRDM 65
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
WESPWG G PGWH+ECS ++ LG DIH GG+D I HH NEIAQ+ ++ A
Sbjct: 66 EWESPWGVGFPGWHLECSVIARETLGDQIDIHTGGIDHIPVHHINEIAQTESVTG-KQFA 124
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
IW+HN + ++G KMSKS N IT++++L+ + ++A+L H++ +F
Sbjct: 125 QIWLHNNHIKVDGHKMSKSLKNIITLDDILD------HGFSPAAFKVAVLSKHFQTEGNF 178
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAV------------------LSALYNDLNTVSA 364
T + + A W + ++ + I+ + + L ++LNT A
Sbjct: 179 TWEIMKSANQRYKNWQRAASLRHQINKTIDNTDQEKSVPSFAASQALIEILDDNLNTPQA 238
Query: 365 IQALHKLARESTKN-------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERL 417
+ + + R+ + L ILG+++ +IS +++L+ ER
Sbjct: 239 LAHIDHVFRQVIEAPLSSINQSALQNFIETINDILGVDLINS--TPDISDDMKQLILERR 296
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
+ K ++ +D IR +L ++G + D +R+
Sbjct: 297 QAREKKDWAKSDLIRDKLLAQGISIRDTPRFSIWERV 333
>gi|157865847|ref|XP_001681630.1| cysteinyl-tRNA synthetase [Leishmania major strain Friedlin]
gi|68124928|emb|CAJ02484.1| putative cysteinyl-tRNA synthetase [Leishmania major strain
Friedlin]
Length = 784
Score = 163 bits (412), Expect = 6e-38, Method: Composition-based stats.
Identities = 125/444 (28%), Positives = 181/444 (40%), Gaps = 79/444 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S+ K + F +D RL P R T ++PQ++ +Q II +G
Sbjct: 220 ERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNG 279
Query: 144 HAYEANNEIIFDTSSIPNYGSFSR------------RKIDEQKMGTRVPEKYHKKNPADF 191
AY + FDT + G ++ E + + K++P DF
Sbjct: 280 FAYAGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDF 339
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE AQ
Sbjct: 340 ALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQ 399
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S + + N ++H G L+++G KMSKS NFITI + L+ A +RL
Sbjct: 400 SEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDEL-----GVTARTMRLLF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------------ 347
L + +P++F+ Q L EA+ S I+
Sbjct: 455 LANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNKHDRELLSKWV 514
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
+ AV +AL ++ +TV A+Q L L + + + I G
Sbjct: 515 EAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRIFG 574
Query: 394 -------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKKFS-------SADYIRKQ- 434
+ + K+ + + IE LV+ R + K D +R +
Sbjct: 575 VVEGSDDVGLQKQGSDDGEARFIEVVNTLVRFRDEVRNAAKDHKVVAGFLPLCDKVRDEW 634
Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
L G LED T WK
Sbjct: 635 LVDAGVRLEDNPAGP-----TTWK 653
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 54/90 (60%), Gaps = 1/90 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ N+L + +F D +R Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 38 LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMED-YFGY 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RAR + +
Sbjct: 97 SVIYQMNITDIDDKIIKRARVNKLLVDFKE 126
>gi|224050868|ref|XP_002197995.1| PREDICTED: cysteinyl-tRNA synthetase [Taeniopygia guttata]
Length = 831
Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R FQ + + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 110 SRLCLYNSLTRSKEVFQPQNGKKVLWYCCGPTVYDASHMGHARSYISFDILRRILRD-YF 168
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDA 95
+ V Y NITDIDDKII+RARQ H ++
Sbjct: 169 KYDVFYCMNITDIDDKIIKRARQNHLFERYRES 201
Score = 141 bits (355), Expect = 2e-31, Method: Composition-based stats.
Identities = 115/439 (26%), Positives = 175/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F KD L L P R + ++P+++ ++ I+ +G+ Y
Sbjct: 286 GSQVTDNSIFSKLPKFWEAEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVKKIVDNGYGY 345
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +Y + +QK K +P DF L
Sbjct: 346 VSNGSVYFDTMKFDASEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLSEKHSPNDFAL 405
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG+GRPGWHIECSAM LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 406 WKSSKPGEPSWDSPWGKGRPGWHIECSAMGGSVLGESMDIHGGGFDLRFPHHDNELAQSE 465
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 466 AYFENDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 518
Query: 314 THYREPIDFTVQRLT------------------------EAEILLSKWPQTSTSKG---- 345
+++ +D++ + + KW
Sbjct: 519 HSWKDTLDYSNNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEVELNKNFY 578
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASA 389
A+ AL ++++T SA++ + L +S ++
Sbjct: 579 EKKAAIHEALCDNIDTRSALEEMRSLVSQSNSYIAAKKSSRQMPNRLLLENISSYLTQML 638
Query: 390 HILGIEVCKEHL---------NKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I G + + N NI + +Q R I + K +D
Sbjct: 639 KIFGAIESDDAIGFPVGGTSQNTNIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 698
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 699 ALRDDILPELGVRFEDHEG 717
>gi|321399071|emb|CBZ08414.1| putative cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|322497350|emb|CBZ32425.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 784
Score = 162 bits (411), Expect = 7e-38, Method: Composition-based stats.
Identities = 125/444 (28%), Positives = 180/444 (40%), Gaps = 79/444 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S+ K + F +D RL P R T ++PQ++ +Q II +G
Sbjct: 220 ERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNG 279
Query: 144 HAYEANNEIIFDTSSIPNYGSFSR------------RKIDEQKMGTRVPEKYHKKNPADF 191
AY + FDT + G ++ E + + K++P DF
Sbjct: 280 FAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDF 339
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE AQ
Sbjct: 340 ALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQ 399
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S + + N ++H G L+++G KMSKS NFITI + L+ A +RL
Sbjct: 400 SEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDEL-----GVTARTMRLLF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------------ 347
L + +P++F+ Q L EA+ S I+
Sbjct: 455 LANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRTDNWKATQGANKHDRELLSKWV 514
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
+ AV +AL ++ +TV A+Q L L + + + I G
Sbjct: 515 EAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRIFG 574
Query: 394 -------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKKFS-------SADYIRKQ- 434
+ + K+ + IE LV+ R + K D +R +
Sbjct: 575 VVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDHKVVAGFLPLCDKVRDEW 634
Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
L G LED T WK
Sbjct: 635 LVDAGVRLEDNPAGP-----TTWK 653
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ N+L + +F D +R Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 38 LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMED-YFGY 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RAR +
Sbjct: 97 SVIYQMNITDIDDKIIKRARVNKLLDDFKE 126
>gi|328478464|gb|EGF48188.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
Length = 116
Score = 162 bits (411), Expect = 8e-38, Method: Composition-based stats.
Identities = 42/91 (46%), Positives = 54/91 (59%), Gaps = 2/91 (2%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ +YNT+ R+ F+ + P IRMYVCGPTVY++ HIGNAR I FD + R Y
Sbjct: 1 MLTLYNTMSRQKEPFKPLHPGEIRMYVCGPTVYNYIHIGNARSAIAFDTIRRYFEYRGF- 59
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
VTYV N TD+DDKII A + + I
Sbjct: 60 -KVTYVSNFTDVDDKIITAAHKTGEAPLIWR 89
>gi|115944413|ref|XP_001195853.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 694
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++ +N+L R+ F + + Y CGPTVYD AH+G+AR I FD+L R++ Y
Sbjct: 23 KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMT-KY 81
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
VTYV NITD+DDKII+RAR +
Sbjct: 82 FNYDVTYVMNITDVDDKIIKRARTNYL 108
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 115/446 (25%), Positives = 173/446 (38%), Gaps = 92/446 (20%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q+ + S++ +F D L L R + ++P++I +Q II G
Sbjct: 189 AQKGCDVSDKSIFSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVPEVIDYVQKIIDRG 248
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPAD 190
YE+N + F TS N S K+ + G + K++ D
Sbjct: 249 FGYESNGSVYFTTSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSISPDQLQEKQSAND 308
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP WESPWG GRPGWHIECSAM+S LG+ DIH GG DL FPHH+NE+A
Sbjct: 309 FALWKNSKPGEPEWESPWGMGRPGWHIECSAMASSILGESMDIHTGGADLKFPHHDNELA 368
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ + ++H+G L ++G KMSKS NFITI + LET + + IRL
Sbjct: 369 QAEAHYGNDDWVRYFLHSGHLTIQGCKMSKSLKNFITIKQALET-------YSSRQIRLV 421
Query: 311 MLMTHYREPIDFT-------------------------VQRLTEAEILLSKWPQTSTSKG 345
L+ +++ +D++ E KW
Sbjct: 422 FLLHSWKDTLDYSTATMECAVQYEKMINEFFLNVKDIIHNSPREGCEAFHKWTTLEIRLN 481
Query: 346 ----IIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIF 385
V S L + ++T SA+ A+ + + +
Sbjct: 482 KQYLECQEKVHSTLCDSIDTKSALDAIRAVVNQCNVYIQERRGAKDSPNAFLLGSIAKYI 541
Query: 386 NASAHI---------LGIEVCKEHLNKNISIAI----EKLVQERLILLKMKKFSS----- 427
I LG V + N+ + + L + R + + +
Sbjct: 542 TKMFKIFGAIEGEELLGFPVGGASESGNVEQTVLPYLKVLAEFRQTIRQK---ARILQAT 598
Query: 428 -----ADYIRKQ-LESKGFILEDYKN 447
D +R + L G LED +
Sbjct: 599 EILQLCDALRDEVLPDLGVRLEDREG 624
>gi|115741226|ref|XP_001190614.1| PREDICTED: similar to Cars protein, partial [Strongylocentrotus
purpuratus]
Length = 596
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +++ +N+L R+ F + + Y CGPTVYD AH+G+AR I FD+L R++ Y
Sbjct: 23 KAQLRHFNSLTRQKELFVPQEGKRVSWYSCGPTVYDAAHMGHARSYISFDILRRVMT-KY 81
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
VTYV NITD+DDKII+RAR +
Sbjct: 82 FNYDVTYVMNITDVDDKIIKRARTNYL 108
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 93/295 (31%), Positives = 138/295 (46%), Gaps = 20/295 (6%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q+ + S++ +F D L L R + ++P++I +Q II G
Sbjct: 189 AQKGCDVSDKSIFSVLPQHWEAEFHSDMNALNVLPADVLTRVSEYVPEVIDYVQKIIDRG 248
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------------HKKNPAD 190
YE+N + F TS N S K+ + G + K++ D
Sbjct: 249 FGYESNGSVYFTTSKFDNDDSHHYAKLVPEAYGDQAALAEGEGDLSISPDQLQEKQSAND 308
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP WESPWG GRPGWHIECSAM+S LG+ DIH GG DL FPHH+NE+A
Sbjct: 309 FALWKNSKPGEPEWESPWGMGRPGWHIECSAMASSILGESMDIHTGGADLKFPHHDNELA 368
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ + ++H+G L ++G KMSKS NFITI + LET + + IRL
Sbjct: 369 QAEAHYGNDDWVRYFLHSGHLTIQGCKMSKSLKNFITIKQALET-------YSSRQIRLV 421
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
L+ +++ +D++ + A + + I + + +
Sbjct: 422 FLLHSWKDTLDYSTATMECAVQYEKMINEFFLNVKDIIHNSPREGCEAFHKWTTL 476
>gi|324509893|gb|ADY44145.1| Cysteinyl-tRNA synthetase [Ascaris suum]
Length = 574
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++N+ RK F + ++ Y+CGPTVYD +H+G+AR + FD+L R++++ Y
Sbjct: 124 SPKFHLFNSFTRKKELFVPLSGKRVKWYICGPTVYDSSHMGHARAYLSFDILRRVMQH-Y 182
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ H
Sbjct: 183 FGYDVHYVMNITDIDDKIIKRARQNHL 209
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 87/258 (33%), Positives = 128/258 (49%), Gaps = 23/258 (8%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S+ + + K +F +D ++L L P R + ++P++I +Q II +G+ Y
Sbjct: 303 GHSVNDHAVFEKLAKKYENEFHEDMSKLNVLPPDVLTRVSEYVPEVIAYVQKIIDNGYGY 362
Query: 147 E-ANNEIIFDT---------------SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+ + FDT + + E + + K+NP D
Sbjct: 363 TTKDGSVYFDTIAFESKPNHSYAKLVPEAFGDNEQLLKNMRESEGELSMGNLEEKRNPTD 422
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W+SPWG+GRPGWHIECSAMSS G DIH GG DL FPHH+NEIA
Sbjct: 423 FALWKSSKSGEPFWDSPWGKGRPGWHIECSAMSSQICGSKLDIHSGGFDLKFPHHDNEIA 482
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q + N ++H G L + G KMSKS NFITI + L + + A +R+
Sbjct: 483 QVEAHYDYDNWVNYFLHCGTLRIAGMKMSKSLKNFITIRDAL-------KQYTARQLRIL 535
Query: 311 MLMTHYREPIDFTVQRLT 328
LM ++ + +D++ +
Sbjct: 536 FLMHNWTDVLDYSASSME 553
>gi|260781591|ref|XP_002585889.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
gi|229270953|gb|EEN41900.1| hypothetical protein BRAFLDRAFT_256696 [Branchiostoma floridae]
Length = 736
Score = 162 bits (410), Expect = 1e-37, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 54/84 (64%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L RK F + Y CGPTVYD +H+G+AR I FD+L R+++ Y
Sbjct: 23 LKLYNSLTRKKEVFVPQKGRRVGWYSCGPTVYDTSHMGHARSYISFDILRRVMKD-YFNY 81
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
V Y NITDIDDKII+RARQ +
Sbjct: 82 DVLYAMNITDIDDKIIKRARQNYL 105
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 88/329 (26%), Positives = 133/329 (40%), Gaps = 73/329 (22%)
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++ DF LWK S P EP W+SPWG GRPGWHIECS M+S LG DIH GG DL F
Sbjct: 296 SEKRSTTDFALWKASKPGEPSWDSPWGMGRPGWHIECSVMASSILGGSLDIHTGGYDLKF 355
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHH+NEIAQ+ + ++H+G L +EG KMSKS NFITI E L +
Sbjct: 356 PHHDNEIAQAEAYYDNDHWVRYFLHSGHLTIEGCKMSKSLKNFITIQEALSR-------Y 408
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------- 347
+ +RL L+ +++ +D++ + A + + +
Sbjct: 409 SSRQLRLGFLLHSWKDTLDYSSDTMGTAVKYEKMINEFFLTVKDVLRTDAPPFLKWDKAE 468
Query: 348 ----------DPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDL 381
V AL ++++T + + + +L +S D+
Sbjct: 469 LQLAESFQQRKEGVHQALCDNIDTRATMDQMRELVSDSNVYLKEKRDARQQPDHALLRDI 528
Query: 382 LPIFNASAHILGIEVCKE---------HLNKNISIAI--------EKLVQERLILLKMKK 424
I G +E N+ + E + R + + K
Sbjct: 529 AAYLTTMLKIFGAIEGEELIGFPVGGTSQAANLEETVMPYLSTMAEFRDKVRQVARQEK- 587
Query: 425 FSS-----ADYIRKQ-LESKGFILEDYKN 447
+ D +R L G LED++
Sbjct: 588 -AKEILQLCDGLRDDVLPQLGVRLEDHEG 615
>gi|261884433|ref|ZP_06008472.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 241
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 87/241 (36%), Positives = 128/241 (53%), Gaps = 17/241 (7%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
IY+++ ++ EF+ I +YVCG VYD AH+G+A+ I FD+L R L+ V
Sbjct: 3 IYDSILKQKVEFKPIREDEANIYVCGHPVYDDAHLGHAKSSISFDLLRRTLKSLGY--KV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+++N TDIDD+I+++ Q S+ IT+ ++ D L +P+AT
Sbjct: 61 KFIKNFTDIDDEILKKMSQPGKSLE------DITNHYISRYKADMYALNVADADIEPKAT 114
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ +I I + +G AY+ ++ I FDTS Y S S RK + RV K KK
Sbjct: 115 TSLTSIINYIPTLFENGWAYKIDDGIYFDTSKDDKYLSLSGRKDENLIA--RVASKDEKK 172
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF----DIHGGGLDLIF 242
+ DF+LWK E ++SP+GRGRPGW EC AM + + DIH GG DL+F
Sbjct: 173 DEKDFVLWKF---DENWYDSPFGRGRPGWRSECVAMIKDHFCGSYEFEIDIHAGGADLLF 229
Query: 243 P 243
P
Sbjct: 230 P 230
>gi|322489357|emb|CBZ24616.1| putative cysteinyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 784
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 125/444 (28%), Positives = 180/444 (40%), Gaps = 79/444 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S+ K + F +D RL P R T ++PQ++ +Q II +G
Sbjct: 220 ERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNG 279
Query: 144 HAYEANNEIIFDTSSIPNYGSFSR------------RKIDEQKMGTRVPEKYHKKNPADF 191
AY + FDT + G ++ E + + K++P DF
Sbjct: 280 FAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGVEGEKRSPNDF 339
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE AQ
Sbjct: 340 ALWKFSKPGEPRWSSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQ 399
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S + + N ++H G L+++G KMSKS NFITI + L+ A +RL
Sbjct: 400 SEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDEL-----GVTARTMRLLF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------------ 347
L + +P++F+ Q L EA+ S I+
Sbjct: 455 LANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNKHDRELLSKWV 514
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
+ AV +AL ++ +TV A+Q L L + + + I G
Sbjct: 515 EAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRIFG 574
Query: 394 -------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKKFS-------SADYIRKQ- 434
+ + K+ + IE LV+ R + K D +R +
Sbjct: 575 VVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDQKVVAGFLPLCDKVRDEW 634
Query: 435 LESKGFILEDYKNPDNGQRMTRWK 458
L G LED T WK
Sbjct: 635 LVDAGVRLEDNPAGP-----TTWK 653
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ N+L + +F D +R Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 38 LKVMNSLTESLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMED-YFGY 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RAR +
Sbjct: 97 SVIYQVNITDIDDKIIKRARVNKLLDDFKE 126
>gi|67468752|ref|XP_650386.1| cysteinyl-tRNA synthetase [Entamoeba histolytica HM-1:IMSS]
gi|56467004|gb|EAL45000.1| cysteinyl-tRNA synthetase, putative [Entamoeba histolytica
HM-1:IMSS]
Length = 701
Score = 162 bits (409), Expect = 1e-37, Method: Composition-based stats.
Identities = 132/430 (30%), Positives = 187/430 (43%), Gaps = 58/430 (13%)
Query: 73 TDIDDKIIE-RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TD+ K ++ R ++ I + +A I K + F D L P R T IP+
Sbjct: 162 TDVIGKYLDVRQKETVDPIEMKEAARIHARKYEELFFADCDALGIRRPDVISRVTEFIPE 221
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+I IQ II +G+AYE+N + FDT+S G R P K N DF
Sbjct: 222 VIAFIQKIIDNGYAYESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPADGEKHNKNDF 281
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK+S EP WES WG GRPGWHIECSAM+S+ G DIH GG DL FPHHENE+AQ
Sbjct: 282 ALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLKFPHHENELAQ 341
Query: 252 SCCA-DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
S ++ E ++H G L++ G KMSKS NFITI + LE + A +R+
Sbjct: 342 SEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFITIKQALE-------KYSARQLRIL 394
Query: 311 MLMTHYREPIDFTVQRLTEAE------------------------ILLSKWPQTSTSKGI 346
LM + I+F+ L EA L +K T+
Sbjct: 395 FLMQSWDAVINFSDSALDEAISKEKTIVEFFATMHSALNAPLKGSPLDAKDRDFLTTLET 454
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEV 396
+ +AL N+ +T +A+ L L R+ + L + GIE
Sbjct: 455 RRKGIHTALCNNFDTATAMNHLFALIRKCNEYLSSTSSTLLLRSALYYIQKMLKVFGIEE 514
Query: 397 CKEHLNKNISIAIEK----LVQERLILLKMKK---FSSADYIRKQ-LESKGFILEDYKNP 448
+ + + + ++ + R +K K + D +R + L G +ED
Sbjct: 515 KQVSSSSDNAPLLDTWCLFRTEVRKEAIKSKNTNILNLCDKVRDEDLPKVGVRVED---- 570
Query: 449 DNGQRMTRWK 458
T WK
Sbjct: 571 ---DGKTAWK 577
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 39/113 (34%), Positives = 58/113 (51%), Gaps = 4/113 (3%)
Query: 1 MKKKIKIYNTLERK-ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M + +K++NTL+R + F IR Y CGPTVYD +H+G+AR + D+ R+L
Sbjct: 1 MTETLKVHNTLKRDGLDNFV--CNGPIRWYCCGPTVYDDSHLGHARTYLSTDIFRRILED 58
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
Y V NITD+DDKII +AR+ A +T+ + +
Sbjct: 59 -YFGYQVIQCMNITDVDDKIILKARKNLLISKYCTATPKVTADTIKMMKEAWN 110
>gi|255026265|ref|ZP_05298251.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
Length = 99
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/107 (37%), Positives = 62/107 (57%), Gaps = 8/107 (7%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I+I+NTL+R+ F+ + ++MYVCGPTVY++ HIGNARP+IVFD + R Y
Sbjct: 1 MSIQIFNTLKREKQPFKPLKDGEVKMYVCGPTVYNYIHIGNARPIIVFDTVRRYFTYRGY 60
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
+ V +V N TD+DDK+I A + ++P + + +
Sbjct: 61 D--VKFVSNFTDVDDKLIRAANELKLTVP------EVADRFIGAYFD 99
>gi|242001294|ref|XP_002435290.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215498620|gb|EEC08114.1| cysteinyl-tRNA synthetase, putative [Ixodes scapularis]
Length = 819
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 55/98 (56%), Gaps = 1/98 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++++YN+L R+ F + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 23 PRLRLYNSLSREKEVFVPQTGKRVLWYNCGPTVYDASHMGHARSYISFDILRRVLAD-YF 81
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
+ YV NITDIDDKII RARQ + +
Sbjct: 82 GYDIFYVMNITDIDDKIIRRARQNYLLESYRSEKRSVA 119
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 109/456 (23%), Positives = 182/456 (39%), Gaps = 94/456 (20%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ + + +T ++F KD T L L P R + ++P+++ + I+ G Y
Sbjct: 196 GSAVSDHSIFTKLTRHWEEEFYKDMTALNVLPPDVVTRVSEYVPEIVDYVAKIVEAGFGY 255
Query: 147 EANNEIIFDTSSIPNYGSFS-----------RRKIDEQKMGTRVPEKYHKKNPADFILWK 195
E+ + FDT+ R+ + E + V K+N DF LWK
Sbjct: 256 ESKGSVYFDTARFDGDPGHFYAKLVPEAFGDRKALREGEGDLSVAGDDEKRNANDFALWK 315
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
S P EP W+SPWG GRPGWHIECS M+S+ LG DIH GG DL FPHH+NEIAQ+
Sbjct: 316 ASKPGEPAWDSPWGAGRPGWHIECSVMASNLLGSSLDIHTGGYDLKFPHHDNEIAQAEAY 375
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ ++H+G L + G KMSKS NF++I + L RS A +RLA L+
Sbjct: 376 FGNDHWVRYFLHSGHLTIAGCKMSKSLKNFVSIRDAL-------RSHSARRLRLAFLLHS 428
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGII---------------------------- 347
+++ +D++ + A + + + +
Sbjct: 429 WKDTLDYSDNTMESAAQWEKTFGEFFLNIKDVLRSAPMPDSIEAFAKWGPEEAGLNASFQ 488
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
V +AL ++++T SA+++L A
Sbjct: 489 DARAGVHAALCDNIDTRSALESLRSAVTACNVYLKSKKASKAIPHAGLLKNVALYVTDIL 548
Query: 390 HILGIEVCKE-----------------HLNKNISIAIEKLVQERLILL-----------K 421
+ G+ +E + K ++ +E L + R + +
Sbjct: 549 KVFGVAGEQEAPTLGFGGGGNAGNSAVNEEKLVAPYLEVLAEFREGVRRLCRAAAGGKPE 608
Query: 422 MKK-FSSADYIRKQ-LESKGFILEDYKNPDNGQRMT 455
+ + D +R L G LED++ ++
Sbjct: 609 SRDLLNLCDALRDDVLPELGVRLEDHEEGAPAIKVV 644
>gi|303319833|ref|XP_003069916.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
C735 delta SOWgp]
gi|240109602|gb|EER27771.1| cysteinyl-tRNA synthetase family protein [Coccidioides posadasii
C735 delta SOWgp]
Length = 839
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R F +DP + + Y CGPTVYD AH+G+AR + D+L RLLR
Sbjct: 58 PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRD- 116
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V ++ NITD+DDKII RARQ+H
Sbjct: 117 YFKFDVKFIMNITDVDDKIITRARQQHL 144
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 113/476 (23%), Positives = 170/476 (35%), Gaps = 120/476 (25%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ ++ + +F++D L L R T IP+++ ++ I+ HG AY A+ + F
Sbjct: 274 FTQLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 333
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ + G + + K++ ADF LWK S EP W
Sbjct: 334 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWP 393
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS ++
Sbjct: 394 SPWGLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 453
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E LE W +R+ LM ++ + I+
Sbjct: 454 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 508
Query: 322 FTVQRLTEAEILLSKWPQTS---------------------TSKGIIDPAVLSALYNDLN 360
T + K AV +L + N
Sbjct: 509 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDALALQLKSAQKAVHDSLCDSFN 568
Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI----- 405
T A+ A+ L + D+ + +I G+ ++ I
Sbjct: 569 TAGAMIAISGLVTQYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSATPASEEIGWSGI 628
Query: 406 --SIAIEKLV--------QERLILL-----------------------------KMK--- 423
A + + R + K
Sbjct: 629 EVPEAAKAFLYPLSAMRDVLREKARSKSGFSVDTIKSVARTGQEALKQNPNPSEEAKPYE 688
Query: 424 ----KF------------------SSADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
F + D +R L G LED R
Sbjct: 689 RVLSDFCTKLESFEQTDTVSKEILALCDRLRDVDLFDLGVYLEDRHEKPALVRTVS 744
>gi|156547291|ref|XP_001606432.1| PREDICTED: similar to cysteinyl-tRNA synthetase [Nasonia
vitripennis]
Length = 735
Score = 161 bits (408), Expect = 2e-37, Method: Composition-based stats.
Identities = 44/86 (51%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K+YN+L R+ EF + + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 18 PPLKLYNSLTRQKEEFVPQYRNRVLWYSCGPTVYDASHMGHARSYISFDILRRVLSD-YF 76
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ H
Sbjct: 77 NFDVVYVMNITDIDDKIIKRARQNHL 102
Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats.
Identities = 110/438 (25%), Positives = 176/438 (40%), Gaps = 84/438 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+++ ++ + S ++ F KD L P R + ++P+++ I+ II +G
Sbjct: 190 KKKGDTVTEHSIFSKLSQHWENDFHKDMDALNVWRPNVLTRVSEYVPEIVAFIEKIIANG 249
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA-------------D 190
AYE+N + FD + K+ + G + + + + D
Sbjct: 250 LAYESNGSVYFDVKAFDKSEKHYYAKLVPEAYGDTSSLQEGEGDLSVSADRLSEKRSVTD 309
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W+SPWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+A
Sbjct: 310 FALWKSSKAGEPWWDSPWGKGRPGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNELA 369
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ ++H+G L + G KMSKS NFITI E L + A +RLA
Sbjct: 370 QAEAYFDNSHWVRYFLHSGHLTISGCKMSKSLKNFITIKEAL-------KKHSARQLRLA 422
Query: 311 MLMTHYREPIDFTV--------------QRLTEAEILLSKWPQTSTSKGIIDPA------ 350
L+ +++ +D+ + + + K T+ D
Sbjct: 423 FLLHSWKDTLDYGDATMDMAVQYEKFLNEFFLNVKCRIRKIGSAGTTINTFDKWGQQEVE 482
Query: 351 -----------VLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNA 387
V +AL ++++T +A+ + +L S D+
Sbjct: 483 LNNKFCAAKDDVHNALCDNIDTRTALDIIRELVTTSNIYIKDCQKPNTLLLRDIAVYITK 542
Query: 388 SAHIL---------GIEVCKEHLNKNISIAI----EKLVQERLILL------KMKK-FSS 427
+ G + E N N+ I E L + R + K
Sbjct: 543 IFTVFGAIATHDSIGFPLEDESKNVNLEETIMPYLEILSEFREKVRGHARLLKATDILQE 602
Query: 428 ADYIRKQ-LESKGFILED 444
D +R L + G LED
Sbjct: 603 CDRLRDDILPNVGVRLED 620
>gi|221043810|dbj|BAH13582.1| unnamed protein product [Homo sapiens]
Length = 341
Score = 161 bits (407), Expect = 2e-37, Method: Composition-based stats.
Identities = 100/263 (38%), Positives = 138/263 (52%), Gaps = 19/263 (7%)
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
V ITD+DDKII+RA + +N + + + S + F +D L L PT R T
Sbjct: 1 MVMGITDVDDKIIKRANE------MNISPASLASLYEEDFKQDMAALKVLPPTVYLRVTE 54
Query: 128 HIPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ I I+ II G+AY + FD S + + P K+
Sbjct: 55 NIPQTISFIEGIIARGNAYSTAKGNVYFDLKSRGDKYGKLVGVVPGP---VGEPADSDKR 111
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ +DF LWK + P E W SPWG GRPGWHIECSA++S G DIH GG+DL FPHHE
Sbjct: 112 HASDFALWKAAKPQEVFWASPWGPGRPGWHIECSAIASMVFGSQLDIHSGGIDLAFPHHE 171
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGGRSWPA 304
NEIAQ + E+ N ++H+G L+ + KMSKS N+ITI + L +++
Sbjct: 172 NEIAQCEVFHQCEQWGNYFLHSGHLHAKGKEEKMSKSLKNYITIKDFL-------KTFSP 224
Query: 305 PVIRLAMLMTHYREPIDFTVQRL 327
V R L + YR ID++ +
Sbjct: 225 DVFRFFCLRSSYRSAIDYSDSAM 247
>gi|242036957|ref|XP_002465873.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
gi|241919727|gb|EER92871.1| hypothetical protein SORBIDRAFT_01g047380 [Sorghum bicolor]
Length = 466
Score = 161 bits (407), Expect = 3e-37, Method: Composition-based stats.
Identities = 135/430 (31%), Positives = 186/430 (43%), Gaps = 97/430 (22%)
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L CL PT +PR T HI +I LI II +GH Y ++ F S P Y S RK+
Sbjct: 1 MAALQCLPPTREPRVTEHIEHIIELITKIIQNGHGYAIEGDVYFSVDSFPEYLLLSGRKL 60
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
D+ + G RV K+NPADF LWK + EP WESPWG GRPGWHIECSAMS+HYLG V
Sbjct: 61 DQNRAGERVAVDTRKRNPADFALWKSAKEGEPSWESPWGHGRPGWHIECSAMSAHYLGHV 120
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
FDIHGGG DLIFPHHENE+AQS A E W+HNGF+N + +KMSKS NF TI +
Sbjct: 121 FDIHGGGRDLIFPHHENELAQSRAAY-PESEVICWMHNGFVNKDDQKMSKSENNFFTIRD 179
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--- 347
++ + +R ++ THYR ++ + + + +A + +T +
Sbjct: 180 IISL-------YHPMALRYFLIRTHYRSDVNHSDKAIEKASDRVYYIYKTLYDCEEMLSK 232
Query: 348 ---------------------DPAVLSALYNDLNTVSAI---QALHKLARESTKNHD--- 380
A L + +DL T + L L + N +
Sbjct: 233 YHEEGISVPVPAEEQNLVNRHRKAFLDNMSDDLKTTDVLDGEDGLTDLLKAINSNMNDLK 292
Query: 381 --------------------------------------LLPIFNASAHILGIEVCKEHLN 402
L +LG+ L+
Sbjct: 293 KLQQKLEQQQKKQQQKKQQQKQQQTQKQPEDYIQGLIALETEIKDKLSVLGLMPPS-SLS 351
Query: 403 KNISIAIEKLVQE--------------RLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ ++ +K ++ R + K K+F +D IRK L + G L D
Sbjct: 352 EVLNQLKDKALKRANLTEEQLQEQIEQRTVARKNKQFEVSDEIRKHLATLGISLMDEPT- 410
Query: 449 DNGQRMTRWK 458
T W+
Sbjct: 411 -----GTSWR 415
>gi|327259955|ref|XP_003214801.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Anolis
carolinensis]
Length = 826
Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats.
Identities = 43/93 (46%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+ +YN+L R +FQ + + + Y CGPTVYD +H+G+AR I FD+L R+L+ Y
Sbjct: 104 QPKLCLYNSLTRNKDKFQPQNGNKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-Y 162
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+ V Y NITDIDDKII+RARQ H +
Sbjct: 163 FKYDVFYCMNITDIDDKIIKRARQNHLFEQYTE 195
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 113/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +++ D L L P R + +IP+++ +Q I+ +G+ Y
Sbjct: 281 GSQVTDNSIFSKLPKFWEEEYHNDMAALNVLPPDVLTRVSEYIPEIVDFVQKIVDNGYGY 340
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +Y + +QK K +P DF L
Sbjct: 341 VSNGSVYFDTVKFDASEKHSYAKLVPEAVGDQKALQEGEGDLSVSADRLSEKHSPNDFAL 400
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S EP WESPWG+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 401 WKSSKLGEPSWESPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 460
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 461 AYFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 513
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K + G +
Sbjct: 514 HSWKDTLDYSCNTMESAIQYEKFMNEFFLNVKDILRAPADVTGQFEKWEKQEIELNKSFY 573
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 574 EKKVAVHEALCDNIDTRTVLEEMRSLVSQCNSYMAAKKAARQMPNRMLLENTSIYLTQMF 633
Query: 390 HILGIEVCKEHL---------NKNISIAIEKLVQE--------RLILLKMKKFS---SAD 429
I G E + N N+ + +Q R I + K F D
Sbjct: 634 KIFGAIESDEAIGFPVGGNGGNLNLESTVMPYLQILSEFREGVRQIAREKKVFEVLQLCD 693
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 694 SLRDDVLPEHGVRFEDHEG 712
>gi|207093180|ref|ZP_03240967.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_AG0C1]
Length = 128
Score = 161 bits (406), Expect = 3e-37, Method: Composition-based stats.
Identities = 49/135 (36%), Positives = 77/135 (57%), Gaps = 8/135 (5%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IY+T ++ F+ + +YVCGPTVYD AH+G+AR I FD+L R L E
Sbjct: 1 MFIYDTKLKQKVPFEPLVEKKANIYVCGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE- 59
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +P+
Sbjct: 60 -VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPK 112
Query: 125 ATNHIPQMIYLIQNI 139
A+ ++ M+ +I+ +
Sbjct: 113 ASEYLDAMVGMIETL 127
>gi|270000778|gb|EEZ97225.1| hypothetical protein TcasGA2_TC011023 [Tribolium castaneum]
Length = 730
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R+ F+ I + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 20 LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLAD-YFGY 78
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
+ +V NITDIDDKII+RARQ +
Sbjct: 79 DIFFVMNITDIDDKIIKRARQNYL 102
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 115/444 (25%), Positives = 176/444 (39%), Gaps = 82/444 (18%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+I N + + Q+F KD L L P R + +IP++I I II +G Y
Sbjct: 193 GATITDNAIFTSLPQHWEQEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGY 252
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKNPADFILW 194
EAN + FD ++ + K+ + G + K +P DF LW
Sbjct: 253 EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDTNSLQEGEGDLTTADQRNEKHSPNDFALW 312
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
KRS P EP W+SPWG+GRPGWHIECSAM+S G DIH GG+DL FPHH+NEIAQS
Sbjct: 313 KRSKPGEPAWDSPWGKGRPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEA 372
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
+ ++H+G L + G KMSKS NF++I + L + A +R A L+
Sbjct: 373 HFGASEWVKYFLHSGHLTIAGCKMSKSLKNFVSIQDALA-------KYTARQLRFAFLLH 425
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------------------- 355
+R+ +D++ + A + + + + L
Sbjct: 426 AWRDTLDYSQNTMEVALQYEKNFNEFFLNVKDLTRNFLKKPTLVGHYVKWERQEMELNGH 485
Query: 356 ------------YNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHI 391
++++T +++++L L S HD+ I
Sbjct: 486 FLQAKDNVHAALCDNIDTRTSLESLRDLVTASNLYIRDKNPPNCLLLHDIAVYITKMLSI 545
Query: 392 LGI--------EVCKEHLNKNISIAI----EKLVQERLI----LLKMK---KFSSADYIR 432
G N I E L R +K D +R
Sbjct: 546 FGAISEPSRVGFPVTSGNESNSEDKILPYLEILADFRDKIRTSARTLKATEILQECDKLR 605
Query: 433 KQ-LESKGFILEDYKNPDNGQRMT 455
+ L + G LED + + ++
Sbjct: 606 DETLPNVGVRLEDREGAPSAVKIV 629
>gi|189241753|ref|XP_968189.2| PREDICTED: similar to cysteinyl-tRNA synthetase [Tribolium
castaneum]
Length = 734
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 40/84 (47%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R+ F+ I + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 20 LKVFNSLTRQKEVFRPISGKKVTWYSCGPTVYDASHMGHARSYITFDILRRVLAD-YFGY 78
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
+ +V NITDIDDKII+RARQ +
Sbjct: 79 DIFFVMNITDIDDKIIKRARQNYL 102
Score = 137 bits (344), Expect = 4e-30, Method: Composition-based stats.
Identities = 115/448 (25%), Positives = 180/448 (40%), Gaps = 86/448 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+I N + + Q+F KD L L P R + +IP++I I II +G Y
Sbjct: 193 GATITDNAIFTSLPQHWEQEFHKDMEALNILKPHVLTRVSEYIPEIIGYISRIISNGFGY 252
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKNPADFILW 194
EAN + FD ++ + K+ + G + K +P DF LW
Sbjct: 253 EANGSVYFDVAAFDKQPNHYYAKLVPEAYGDTNSLQEGEGDLTTADQRNEKHSPNDFALW 312
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
KRS P EP W+SPWG+GRPGWHIECSAM+S G DIH GG+DL FPHH+NEIAQS
Sbjct: 313 KRSKPGEPAWDSPWGKGRPGWHIECSAMASTIFGDTLDIHTGGVDLKFPHHDNEIAQSEA 372
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
+ ++H+G L + G KMSKS NF++I + L + A +R A L+
Sbjct: 373 HFGASEWVKYFLHSGHLTIAGCKMSKSLKNFVSIQDALA-------KYTARQLRFAFLLH 425
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------------------- 355
+R+ +D++ + A + + + + L
Sbjct: 426 AWRDTLDYSQNTMEVALQYEKNFNEFFLNVKDLTRNFLKKPTLVGHYVKWERQEMELNGH 485
Query: 356 ------------YNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHI 391
++++T +++++L L S HD+ I
Sbjct: 486 FLQAKDNVHAALCDNIDTRTSLESLRDLVTASNLYIRDKNPPNCLLLHDIAVYITKMLSI 545
Query: 392 LGI--------EVCKEHLNKNISIAIEKLV------------QERLILLKMK---KFSSA 428
G N+SI+ E + + R +K
Sbjct: 546 FGAISEPSRVGFPVTSGNESNVSISHEDKILPYLEILADFRDKIRTSARTLKATEILQEC 605
Query: 429 DYIRKQ-LESKGFILEDYKNPDNGQRMT 455
D +R + L + G LED + + ++
Sbjct: 606 DKLRDETLPNVGVRLEDREGAPSAVKIV 633
>gi|320034216|gb|EFW16161.1| cysteinyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 805
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R F +DP + + Y CGPTVYD AH+G+AR + D+L RLLR
Sbjct: 24 PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYVSTDILRRLLRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V ++ NITD+DDKII RARQ+H
Sbjct: 83 YFKFDVKFIMNITDVDDKIITRARQQHL 110
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 112/476 (23%), Positives = 168/476 (35%), Gaps = 120/476 (25%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ ++ + +F++D L L R T IP+++ ++ I+ HG AY A+ + F
Sbjct: 240 FTQLSQRFEDRFMEDARVLNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 299
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ + G + + K++ ADF LWK S EP W
Sbjct: 300 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKTVEKRSKADFALWKASKAGEPSWP 359
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS ++
Sbjct: 360 SPWGLGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 419
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E LE W +R+ LM ++ + I+
Sbjct: 420 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 474
Query: 322 FTVQRLTEAEILLSKWPQTS---------------------TSKGIIDPAVLSALYNDLN 360
T + K AV +L + N
Sbjct: 475 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDALALQLKSAQKAVHDSLCDSFN 534
Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI----- 405
T A+ A+ L D+ + +I G+ ++ I
Sbjct: 535 TAGAMIAISGLVTHYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSATPASEEIGWSGI 594
Query: 406 --SIAIEKLV--------QERLILL-----------------------------KMKKFS 426
A + + R + K +
Sbjct: 595 EVPEAAKAFLYPLSAMRDVLREKARSKSGFSVDTIKSVARTGQEALKQNPNPSEEAKPYE 654
Query: 427 S-------------------------ADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
D +R L G LED R
Sbjct: 655 RVLSDFCTKLESFEQTDTVSKEILALCDRLRDVDLFDLGVYLEDRHEKPALVRTVS 710
>gi|256087600|ref|XP_002579954.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
gi|238665453|emb|CAZ36193.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
Length = 843
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L + F D +++ Y CGPTVYD +H+G+AR + FDV+ R+L Y
Sbjct: 51 PNLYLYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMD-YF 109
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
VTYV NITDIDDKII+RARQ H
Sbjct: 110 NFKVTYVLNITDIDDKIIKRARQNHL 135
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
SI + + ++++ D L + P+ R T +I +I ++ II +G AY
Sbjct: 218 GASISDHQIFEALARHFEKEYLVDMECLNIIPPSVLVRVTEYIDPIIKYVKQIIDNGFAY 277
Query: 147 E-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---------HKKNPADFILWKR 196
+ + FDT+ + K+ G + KK+ DF LWK
Sbjct: 278 VVPSGSVYFDTNRFASSPMHFYAKLVPTAYGDTSQLESGEGELCITGEKKSSNDFALWKA 337
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 338 SKPGEPSWPSPWGKGRPGWHIECSVMASDILGDTLDIHSGGVDLKFPHHDNELAQSEAYF 397
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
N ++H+G L + G KMSKS NFITI + L ++ + IRL L+ +
Sbjct: 398 GHSHWVNYFLHSGHLTISGCKMSKSLKNFITIRDAL-------KTHTSRQIRLIFLLHSW 450
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
R+ +D++V L EA + + I
Sbjct: 451 RDTMDYSVDTLAEAVGFEKQLIDFLYTCSNI 481
>gi|154333641|ref|XP_001563077.1| cysteinyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134060087|emb|CAM37400.1| putative cysteinyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 780
Score = 160 bits (405), Expect = 4e-37, Method: Composition-based stats.
Identities = 122/446 (27%), Positives = 180/446 (40%), Gaps = 83/446 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ SI K + F +D RL P R T ++PQ++ +Q II +G
Sbjct: 220 ERNGHSISDQQIFEDHARKYERAFFEDMQRLGIRDPDIVSRVTEYVPQVVEFVQKIIDNG 279
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR------------KIDEQKMGTRVPEKYHKKNPADF 191
AY + FDT + G + ++ E + + K++ DF
Sbjct: 280 FAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEEEMAEGEGTLTKAVEGEKRSSNDF 339
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE AQ
Sbjct: 340 ALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDVLGENMDIHSGGWDLKFPHHDNECAQ 399
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S + + N ++H G L+++G KMSKS NFITI + L+ +RL
Sbjct: 400 SEACNLHNQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDDL-----GVTPRTMRLLF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG-------------------------- 345
L + + +P++F+ Q L EA+ S
Sbjct: 455 LASPWYKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRADNWKATQGVNTYDRELLGKCI 514
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
+ AV +AL ++ +TV A+Q L L + + + + G
Sbjct: 515 EAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRVFG 574
Query: 394 -------IEVCKEHLNKNISIAIE---KLV----QERLILLKMKKFS------SADYIRK 433
+ + K+ + + IE LV + R + K + D +R
Sbjct: 575 VVEGSDDVGLQKQGSGDDETRFIEVMNALVRFRDEVRDAAKEQK--AVAAFLPLCDKVRD 632
Query: 434 Q-LESKGFILEDYKNPDNGQRMTRWK 458
+ L G LED T WK
Sbjct: 633 EWLVDAGVRLEDNPAGP-----TAWK 653
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 37/80 (46%), Positives = 52/80 (65%), Gaps = 1/80 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ N+L + +F D +R Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 38 LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRIMED-YFGY 96
Query: 65 CVTYVRNITDIDDKIIERAR 84
V Y NITDIDDKII+RAR
Sbjct: 97 SVLYQMNITDIDDKIIKRAR 116
>gi|256087602|ref|XP_002579955.1| cysteinyl-tRNA synthetase [Schistosoma mansoni]
gi|238665454|emb|CAZ36194.1| cysteinyl-tRNA synthetase, putative [Schistosoma mansoni]
Length = 814
Score = 160 bits (404), Expect = 5e-37, Method: Composition-based stats.
Identities = 42/86 (48%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L + F D +++ Y CGPTVYD +H+G+AR + FDV+ R+L Y
Sbjct: 22 PNLYLYNSLTSQKDLFIPQDGRHVKWYTCGPTVYDVSHLGHARTYVAFDVIRRVLMD-YF 80
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
VTYV NITDIDDKII+RARQ H
Sbjct: 81 NFKVTYVLNITDIDDKIIKRARQNHL 106
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 92/271 (33%), Positives = 133/271 (49%), Gaps = 17/271 (6%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
SI + + ++++ D L + P+ R T +I +I ++ II +G AY
Sbjct: 189 GASISDHQIFEALARHFEKEYLVDMECLNIIPPSVLVRVTEYIDPIIKYVKQIIDNGFAY 248
Query: 147 E-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---------HKKNPADFILWKR 196
+ + FDT+ + K+ G + KK+ DF LWK
Sbjct: 249 VVPSGSVYFDTNRFASSPMHFYAKLVPTAYGDTSQLESGEGELCITGEKKSSNDFALWKA 308
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 309 SKPGEPSWPSPWGKGRPGWHIECSVMASDILGDTLDIHSGGVDLKFPHHDNELAQSEAYF 368
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
N ++H+G L + G KMSKS NFITI + L ++ + IRL L+ +
Sbjct: 369 GHSHWVNYFLHSGHLTISGCKMSKSLKNFITIRDAL-------KTHTSRQIRLIFLLHSW 421
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
R+ +D++V L EA + + I
Sbjct: 422 RDTMDYSVDTLAEAVGFEKQLIDFLYTCSNI 452
>gi|198413558|ref|XP_002119777.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Ciona
intestinalis]
Length = 336
Score = 160 bits (404), Expect = 6e-37, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 64/127 (50%), Gaps = 8/127 (6%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R+ F + + ++ Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 32 LKLFNSLTRQKEVFIPENGNFVKWYSCGPTVYDASHMGHARSYISFDILRRVLMD-YFGY 90
Query: 65 CVTYVRNITDIDDKIIERARQE-------HPSIPINDAISIITSKNTQQFVKDTTRLACL 117
V Y NITDIDDKII RAR S + I+ +++ + K +
Sbjct: 91 NVLYCMNITDIDDKIITRARHNYLVDEYLKQSHSKEEIITDVSAALEEFSEKLSKTDDPD 150
Query: 118 APTHQPR 124
R
Sbjct: 151 KKVMMER 157
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/139 (23%), Positives = 60/139 (43%), Gaps = 13/139 (9%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ + N S + +++ +D L P R ++++P+++ ++ II +G
Sbjct: 197 KKHGAGVTDNSIFSALPQYWEREYFEDMDALNVSPPDVLTRVSDYVPEIVKYVEEIIKNG 256
Query: 144 HAYEANNEIIF-----DTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPAD 190
+ Y++N + F D+S Y + + + K+ P D
Sbjct: 257 YGYKSNGSVYFSVSQFDSSDDHFYARLVPEAVGDLQALQEGEGSLSSVADQLNEKRAPND 316
Query: 191 FILWKRSTPMEPGWESPWG 209
F LWK S P EP WESPWG
Sbjct: 317 FALWKASKPGEPSWESPWG 335
>gi|302848858|ref|XP_002955960.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
nagariensis]
gi|300258686|gb|EFJ42920.1| hypothetical protein VOLCADRAFT_66444 [Volvox carteri f.
nagariensis]
Length = 650
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 106/437 (24%), Positives = 174/437 (39%), Gaps = 80/437 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R+ ++ +K ++F++D L C P R + ++P+++ +Q I+ +G
Sbjct: 205 RELGAAVTDPSVFRAHAAKYEREFLEDMDALGCRRPDVLTRVSEYMPEIVNYVQRILDNG 264
Query: 144 HAYEANNEIIFDTSSIPN-YGSFSRRKIDEQKMGTRVPEKYHK------KNPADFILWKR 196
AY +N + FDT + ++ + E ++ DF LWK
Sbjct: 265 MAYVSNGSVYFDTQNFRACGHTYGKLNPWAVGSAALAAEGESNFETSEKRSLQDFALWKA 324
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W+SPW +GRPGWHIECSAM+S +G D+H GG DL FPHH+NE+AQ+
Sbjct: 325 SKPGEPVWDSPWSQGRPGWHIECSAMASTIIGSRLDLHSGGEDLRFPHHDNELAQAEAYY 384
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
E N ++H G L++EG KMSKS NFITI E L +++ A +RL ++ +
Sbjct: 385 HTEWWVNYFLHCGHLHIEGLKMSKSLKNFITIREAL-------QTFNARQLRLMFVLQPW 437
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKG------IIDPAVLSALYNDL----------- 359
+ + + Q E + ++ + I D
Sbjct: 438 NKTMMYGEQARAEMKAREAQLKNFFQNVEAAVRGQDICTTEQRWQPEDFELNSRILGAQT 497
Query: 360 ----------NTVSAIQALHKLARESTKNHD-------------LLPIFNASAHILGIEV 396
NT +A+ AL +L + K + + G+
Sbjct: 498 AVDLALRDNINTPAAMDALSELIKAVNKYLEKKVGAARPLLLRKAASYVTRILSVFGLVD 557
Query: 397 -------------CKEHLNKNISIAIEKLVQERLIL----------LKMKKFSSADYIRK 433
++ S ++ LV R + ++ ++ D +R
Sbjct: 558 GPGDRYSTWQLASPSAKVSAGTSRYLDALVAFRQEVCAMAAAAAEPREV--LAACDRLRD 615
Query: 434 Q-LESKGFILEDYKNPD 449
Q L G LED
Sbjct: 616 QTLVDLGVRLEDRPEGT 632
Score = 136 bits (342), Expect = 8e-30, Method: Composition-based stats.
Identities = 37/108 (34%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 5 IKIYNTLERKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +YN+ + F + + I Y CGPTVYD AH+G+AR + FD++ R+L Y+
Sbjct: 24 LMLYNSFVDEKVPFVPVAGPNSRQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLEDYF 83
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVK 109
G C+ V N+TD+DDKII RAR+ + + ++ V
Sbjct: 84 GYNCL-MVMNVTDVDDKIILRARRNYLLAQYKRSGKTPDEHTEERHVD 130
>gi|294880574|ref|XP_002769069.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239872171|gb|EER01787.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 769
Score = 159 bits (401), Expect = 1e-36, Method: Composition-based stats.
Identities = 53/216 (24%), Positives = 86/216 (39%), Gaps = 15/216 (6%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++++N+L F I+ +RMYVCGPTVYD AH+G+AR + FD++ R+L Y
Sbjct: 20 DMGLRVHNSLTDTKVPFVPINGKEVRMYVCGPTVYDSAHMGHARAYLTFDIIRRILED-Y 78
Query: 62 GEKCVTYVRNITDIDDKIIERARQ----------EHPSIPINDAISIITSKNTQQFVK-- 109
+ V Y NITDIDDKII +AR+ H + ++ +N Q+ +
Sbjct: 79 FQYRVFYQMNITDIDDKIILKARKGELVRQYSSSHHSLEKVKADCGVVVERNIQKAHQKL 138
Query: 110 -DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSR 167
+ L + + + HA I +
Sbjct: 139 TEMKAENVLEMAAVYLSLATVVVHQIDPSSREFEEHATLGQRFITLCRDLLADWLDEQFG 198
Query: 168 RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
I+++++ KY K+ D P E
Sbjct: 199 ATIEDKEIFYAHARKYEKEFLEDCESLGIREPTEVV 234
Score = 136 bits (343), Expect = 7e-30, Method: Composition-based stats.
Identities = 112/441 (25%), Positives = 165/441 (37%), Gaps = 84/441 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII-LHGHA 145
+I + K ++F++D L PT Q + G A
Sbjct: 198 GATIEDKEIFYAHARKYEKEFLEDCESLGIREPTEVVEVLVGTCQKSSSSFKLWVQRGIA 257
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV-----------------PEKYHKKNP 188
YE+ + FDT +G + + G K++
Sbjct: 258 YESKGSVYFDTQRYKTHGFNYPKLVPSAGKGATDAEIAEGEGALSTNATGGDFGSEKRHR 317
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP WESPWG GRPGWHIECS M+S LG DIHGGG DL FPHH+NE
Sbjct: 318 NDFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSDLKFPHHDNE 377
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
IAQS + N ++H G L+++G KMSKS NFITI + L +S+ A +R
Sbjct: 378 IAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQAL-------QSYTARQLR 430
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------- 347
+ L+ + +PI+F+ Q + EA+ +++ +
Sbjct: 431 IMFLLQQWDKPINFSDQTIAEAKDKETRFNSFFNRVKELLRTRPPYSIRQKWEEESLDFA 490
Query: 348 --------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNA 387
AV AL ++ NT A+ L +
Sbjct: 491 INEQIATAMAAVHEALCDNFNTSEAMTQLDNIVTAVNSYMVKSENPKAPLIQQAAQYVQK 550
Query: 388 S---------AHILGIEVCKE-HLNKNISIAIEKLVQERLILL----KMKK---FSSADY 430
A +LG+ + +K +S + R L K D
Sbjct: 551 MLTIFGVTDNADVLGLSSGAQGEESKTLSNVLTAFASFREQLRSTAQADKNKMLLQMCDD 610
Query: 431 IRKQ-LESKGFILEDYKNPDN 450
+R + + G LED + +
Sbjct: 611 LRDETMVDLGVRLEDKPDGSS 631
>gi|307178002|gb|EFN66863.1| Cysteinyl-tRNA synthetase, cytoplasmic [Camponotus floridanus]
Length = 738
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+++YN+L R+ F + + Y CGPTVYD +H+G+AR I FD+L R+L Y
Sbjct: 20 LRLYNSLTREKEVFVPQFGNRVLWYCCGPTVYDASHMGHARSYISFDILRRILSD-YFGY 78
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ +
Sbjct: 79 DVLYVMNITDIDDKIIKRARQNYL 102
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 105/438 (23%), Positives = 169/438 (38%), Gaps = 84/438 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ + + + ++ +F KD L L P R + +IP++I +Q +I +G
Sbjct: 190 KKYGKDVTEHSIFTKLSKDWESEFHKDMDALNVLRPNVLTRVSEYIPEIIAFVQKVIDNG 249
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA-------------D 190
AYE+N + FD S K+ + G + + + + D
Sbjct: 250 FAYESNGSVYFDVGKFDKQEKHSYAKLVPEAYGDTSSLQEGEGDLSVTEDRLSEKRSVTD 309
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S EP W+SPWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NEIA
Sbjct: 310 FALWKSSKTGEPWWDSPWGKGRPGWHIECSVMASAICGESLDIHTGGVDLKFPHHDNEIA 369
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ ++H+G L + G KMSKS NF+TI + L + + + +RLA
Sbjct: 370 QAEAYFDNSNWVKYFLHSGHLTIAGCKMSKSLKNFVTIQDAL-------KKYSSRQLRLA 422
Query: 311 MLMTHYREPIDFTV---------QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---- 357
L+ +++ +D++ ++ L K + +
Sbjct: 423 FLLHSWKDTLDYSDNTMNIAVQYEKFLNEFFLNIKCKIRCLGTKTTIDSFIKWFNPEIEL 482
Query: 358 -----------------DLNTVSAIQALHKLARESTKN------------HDLLPIFNAS 388
+++T + ++ + +L D+
Sbjct: 483 NKNFHLAKHSIHKALCDNIDTRTVLEIIRELVTNCNVYMSQNKNPNTLLLRDIAAYITKM 542
Query: 389 AHILG-IEVCKEHLNKNISIAI-------------EKLVQERLILL------KMKK-FSS 427
I G I E + I I E L R + K
Sbjct: 543 FIIFGTISSSYESIGFPIDDEIVGINVEETIMPYLEILANFRQKVRNCAKILKANDILQE 602
Query: 428 ADYIRKQ-LESKGFILED 444
D +R L + G LED
Sbjct: 603 CDILRDDILPNVGVRLED 620
>gi|242792877|ref|XP_002482046.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
gi|218718634|gb|EED18054.1| cysteinyl-tRNA synthetase [Talaromyces stipitatus ATCC 10500]
Length = 828
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L + F IDP+ + Y CGPTVYD +H+G+AR + D++ R+LR
Sbjct: 52 PTLKIYNSLTKSKVPFVPIDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRD- 110
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII R RQ++
Sbjct: 111 YFKFDVHFVMNITDVDDKIILRGRQQYL 138
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 113/416 (27%), Positives = 168/416 (40%), Gaps = 73/416 (17%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T K +F+KD L L P R T + PQ+ ++ I+ + AY
Sbjct: 259 IDADDHSIFTKLTKKYEGRFMKDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAYV 318
Query: 147 EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ + FD + G K+ + GT + K + +DF LWK S
Sbjct: 319 TSDGSVYFDIKAFEEAGFPYARLEPWSKSDGKLIAEGEGTLTSKTTEKHSLSDFALWKAS 378
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-- 255
P EP W S WG+GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 379 KPGEPSWSSQWGKGRPGWHIECSAMASDRLGKTIDIHSGGIDLAFPHHDNELAQSEAYWN 438
Query: 256 -DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++H G L+++G KMSKS NF TI E LE + W + +R+ L+
Sbjct: 439 THTHDQWINYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KDWTSRSLRIVFLLG 493
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------------PAVLS 353
H+ I+ T + K +D V
Sbjct: 494 HWNGGIEITEDLVNTGNAWEDKLNNFFLKMKELDILKKSSSGTDQSLGEALESTKALVNE 553
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILGIEVCKEHLNK 403
L + NT +A+ A+ L + + +I G+
Sbjct: 554 HLSDSFNTPAAMAAISDLVTKFNSVDKATVNPEHVEQMGKWVTSIVNIFGLNGSASPDTT 613
Query: 404 N-----ISIAIEK------LVQERLILLKMKKFSSADYIRKQ-LESKGFILEDYKN 447
I + E L R D +R++ L +G +ED KN
Sbjct: 614 EIGWSGIDVPEEAKPYLYPLSALR------------DSLREKALSKEGISVEDIKN 657
>gi|170584986|ref|XP_001897270.1| cysteinyl tRNA synthetase protein 1, isoform b [Brugia malayi]
gi|158595316|gb|EDP33879.1| cysteinyl tRNA synthetase protein 1, isoform b, putative [Brugia
malayi]
Length = 768
Score = 158 bits (399), Expect = 2e-36, Method: Composition-based stats.
Identities = 40/83 (48%), Positives = 58/83 (69%), Gaps = 1/83 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+ RK F ++P ++ Y+CGPTVYD +HIG+AR + FD+L R+L+ Y
Sbjct: 33 PQLCLYNSFTRKKELFVPLNPKQVKWYICGPTVYDSSHIGHARAYLSFDILRRVLQD-YF 91
Query: 63 EKCVTYVRNITDIDDKIIERARQ 85
+ Y+ NITDIDDKII+RARQ
Sbjct: 92 GYDIQYIMNITDIDDKIIKRARQ 114
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/440 (25%), Positives = 168/440 (38%), Gaps = 97/440 (22%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ K +F+ D L L PT R + +IP++I ++ II +G+ Y + + F
Sbjct: 220 FDRLAKKYENEFLCDMASLNVLPPTVLTRVSEYIPEIIAYVEKIINNGYGYVTKDGSVYF 279
Query: 155 DTSSIPN---------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
DT N + + E + + +K+N DF LWK S
Sbjct: 280 DTVKFDNSEKHSYCKLVPEAFADNEQLMKNMRESEGDLSMGNLENKRNVTDFALWKASKD 339
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
EP W SPWG+GRPGWHIECSAMSS G DIH GG DL FPHH+NEIAQ IE
Sbjct: 340 GEPYWNSPWGKGRPGWHIECSAMSSKICGTSLDIHAGGFDLKFPHHDNEIAQVEAYYDIE 399
Query: 260 KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP 319
N ++H G L + G KMSKS NFITI E L + + A +R+ LM ++ +
Sbjct: 400 NWVNYFLHCGSLRIAGLKMSKSLKNFITIREAL-------KHYSARQLRILFLMHNWNDV 452
Query: 320 IDF---------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL----------- 359
+D+ ++++ LL K K + +L
Sbjct: 453 LDYSAASMERALQFEKISXEFFLLVKDYLRKYYKPNNSESYQKYNDEELLLVNNFCKIKT 512
Query: 360 ----------NTVSAIQALHKLARESTKN-----------------HDLLPIFNASAHIL 392
+T + ++ L +L ++ + I
Sbjct: 513 EINIALCDSVDTRTVVEKLRELIAIGNAYFIEMEKKEDSVPNCLLLRNIALYMTSLLKIF 572
Query: 393 GIEVC-----------------------KEHLNKNISIAIEKLVQERLILLKMK---KFS 426
G+ +E L ++ ++ R + + K
Sbjct: 573 GVIPQNVEIGFPIEHNGISNHDISITSKEEMLMPYLTALVDFRENVRKVAREQKIIGILE 632
Query: 427 SADYIRKQ-LESKGFILEDY 445
D +R + L G LED
Sbjct: 633 ECDKLRDEVLPELGVRLEDR 652
>gi|71014778|ref|XP_758760.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
gi|46098550|gb|EAK83783.1| hypothetical protein UM02613.1 [Ustilago maydis 521]
Length = 824
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 38/125 (30%), Positives = 59/125 (47%), Gaps = 1/125 (0%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++K+YN+L R T F + Y CGPTVYD +H+G+AR + D++ R+LR Y
Sbjct: 37 EPELKMYNSLTRTKTPFVPKKGRTVTWYNCGPTVYDASHMGHARNYVTQDIIRRILRD-Y 95
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +V NITD+DDKII +AR + + +T + +
Sbjct: 96 LGYDVHFVMNITDVDDKIIIKARHSYLLKQFRSQHAQLTKPLLATVQEAWSAYFVKNLER 155
Query: 122 QPRAT 126
Sbjct: 156 FAPPV 160
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 113/468 (24%), Positives = 175/468 (37%), Gaps = 109/468 (23%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q ++ + ++ D RL PT R + ++P+++ +Q II G
Sbjct: 254 NQFGSTVTDPAIFRDTAAYWEAEYFNDMKRLHVEPPTTLTRVSEYVPEIVTFVQQIIDRG 313
Query: 144 HAY-----EANNEIIFDTSSIPNYGSFSRR------KIDEQKMGTRVPEKYHK------- 185
AY + + FDT + S K+ G R + +
Sbjct: 314 FAYAEGVDQNKKNVWFDTRAFDGAKSQDGSFQHSYAKLQPWSKGNRELLEEGEGSLSTST 373
Query: 186 ------KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+ +DF LWK S P EP W SPWG GRPGWHIECS M S LG+ DIH GG+D
Sbjct: 374 AATAGKRAASDFALWKSSKPGEPAWPSPWGPGRPGWHIECSVMGSAVLGETMDIHSGGVD 433
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L+FPHH+NEIAQS + N ++H G L++EG KMSKS NFI+I+E LE
Sbjct: 434 LMFPHHDNEIAQSEAHHGCRQWVNYFLHTGHLHIEGLKMSKSLKNFISIDEALER----- 488
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
+ A +R++ L+ + +DF L E + S +
Sbjct: 489 --FTARQLRMSFLLQPWHGRMDFKQSALGEVKNAESAFNNFFVSVKAKVAQAKALGDAYS 546
Query: 338 ----------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---- 383
S A A+ + +T ++ L L ++ L
Sbjct: 547 DGQHHYGAAERSLVDSLEEAQHAFRLAMCDSFDTPKGMEILLDLVSKANIYEKSLEKRAD 606
Query: 384 -----------IFNASAHILGIEVCK------------EHLNKNISIAI--EKLV----- 413
+LG+ + ++S A+ E+L+
Sbjct: 607 VNVGVLTAVARYVGDMLKMLGLGEGAALSASQEIGWGVADESGDVSAAVNKEELLMPYLR 666
Query: 414 -------QERLILLK---MKKF-SSADYIRK-QLESKGFILEDYKNPD 449
R + ++ +D +R L G LED ++
Sbjct: 667 ALSNFRDAVRNLARSSAPASEYLKLSDALRDNDLVDLGISLEDTEDGQ 714
>gi|259482994|tpe|CBF77996.1| TPA: cysteinyl-tRNA synthetase (AFU_orthologue; AFUA_5G09610)
[Aspergillus nidulans FGSC A4]
Length = 833
Score = 157 bits (398), Expect = 2e-36, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K+YN+L + T F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 55 PSLKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 113
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII RARQ+H
Sbjct: 114 YFKFNVHFVMNITDVDDKIILRARQQHL 141
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 112/468 (23%), Positives = 175/468 (37%), Gaps = 113/468 (24%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + +T K ++F+KD L L P R T + ++ ++ I+ + Y
Sbjct: 266 IDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYV 325
Query: 148 A-NNEIIFDTSSIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ + + FD ++ G S S K+ + G+ + K++ +DF LWK S
Sbjct: 326 SADGSVYFDINAFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSS 385
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 386 KPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWH 445
Query: 258 IE--KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ N ++H G L+++G KMSKS NF TI E LE + W +R+ L+
Sbjct: 446 SHGDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGG 500
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTS---------------------KGIIDPAVLSA 354
+++ I+ T + ++ K AV
Sbjct: 501 WKDGIEITDELVSAGNSWEDKLNNFFIRVKDPAARQGPASSTDTTLAEALEAAKSAVHEQ 560
Query: 355 LYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKN 404
L + NT + ++ +L + + ++LG+ ++
Sbjct: 561 LCDSFNTPGMMNSISELITKYNIADKSTLNPKDVEAVARWVTYMVNVLGLNGQTPADSRE 620
Query: 405 -----ISIAIEK------LVQERLILLK---MK--------------------------- 423
I + E L R L + K
Sbjct: 621 IGWSGIDVPEEAKPFLYPLSAMRDALRQSARAKTLNAGEISKIVEQEAIPEATTEKTKPY 680
Query: 424 -----KF------------------SSADYIRK-QLESKGFILEDYKN 447
F + D +R L G LED +N
Sbjct: 681 ATVVSNFRTKVSSLQDSGDLGKEVLALCDRLRDVDLFDLGVYLEDREN 728
>gi|312093145|ref|XP_003147582.1| hypothetical protein LOAG_12019 [Loa loa]
gi|307757252|gb|EFO16486.1| hypothetical protein LOAG_12019 [Loa loa]
Length = 274
Score = 157 bits (397), Expect = 3e-36, Method: Composition-based stats.
Identities = 41/83 (49%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+ RK F + P I+ Y+CGPTVYD +HIG+AR + FD+L R+L+ Y
Sbjct: 31 PHLYLYNSFTRKKELFVPLKPKQIKWYICGPTVYDSSHIGHARAYLSFDILRRVLQD-YF 89
Query: 63 EKCVTYVRNITDIDDKIIERARQ 85
+ Y+ NITDIDDKII+RARQ
Sbjct: 90 GYDIQYIMNITDIDDKIIKRARQ 112
>gi|159126589|gb|EDP51705.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus A1163]
Length = 808
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 24 PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
Y V ++ NITD+DDKII RARQ+H A IT++
Sbjct: 83 YFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124
Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 109/486 (22%), Positives = 172/486 (35%), Gaps = 118/486 (24%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + + + +T K ++F+KD L L P R T + ++ ++ I+ +
Sbjct: 232 KASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENK 291
Query: 144 HAY-EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFIL 193
Y + + FD ++ N G K+ + G + K++ +DF L
Sbjct: 292 FGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFAL 351
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 352 WKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSE 411
Query: 254 CAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
++ N ++H G L+++G KMSKS NF TI E LE + W +R
Sbjct: 412 AYWSHGHPHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLR 466
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------------KGII 347
+ L+ +R+ ++ T + ++ K
Sbjct: 467 IVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSGQTSGSDTTLPAALEAA 526
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVC 397
A L + NT A+ A+ +L + + + +I G+
Sbjct: 527 KKATFDHLCDSFNTQGAMSAISELISKYNSADKSTLNPKDVEAVARWVTSMVNIFGLNGS 586
Query: 398 KEHLNKNI-------SIAIEKLV--------QERLILLK--------------------- 421
+ I + + R
Sbjct: 587 ATADSTEIGWSGIDVPEEAKPFLYPLSSMRDSLRQAARAKEGVTPETVAEIVSKGDVPEL 646
Query: 422 -----MKKFSS-------------------------ADYIRK-QLESKGFILEDYKNPDN 450
K ++ D +R L G LED +N
Sbjct: 647 DLTESAKPYAELLSNFRTKVSSIQPSESLGKEILALCDRVRDIDLFDLGIYLEDRENLPA 706
Query: 451 GQRMTR 456
R
Sbjct: 707 LVRPVT 712
>gi|70997892|ref|XP_753678.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|66851314|gb|EAL91640.1| cysteinyl-tRNA synthetase [Aspergillus fumigatus Af293]
Length = 808
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 44/102 (43%), Positives = 61/102 (59%), Gaps = 3/102 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 24 PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
Y V ++ NITD+DDKII RARQ+H A IT++
Sbjct: 83 YFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTITAE 124
Score = 129 bits (325), Expect = 7e-28, Method: Composition-based stats.
Identities = 109/486 (22%), Positives = 172/486 (35%), Gaps = 118/486 (24%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + + + +T K ++F+KD L L P R T + ++ ++ I+ +
Sbjct: 232 KASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENK 291
Query: 144 HAY-EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFIL 193
Y + + FD ++ N G K+ + G + K++ +DF L
Sbjct: 292 FGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLVAEGEGALTKKTTEKRSASDFAL 351
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 352 WKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSE 411
Query: 254 CAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
++ N ++H G L+++G KMSKS NF TI E LE + W +R
Sbjct: 412 AYWSHGHPHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLR 466
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------------KGII 347
+ L+ +R+ ++ T + ++ K
Sbjct: 467 IVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSGQTSGSDTTLPAALEAA 526
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVC 397
A L + NT A+ A+ +L + + + +I G+
Sbjct: 527 KKATFDHLCDSFNTQGAMSAISELISKYNSADKSTLNPKDVEAVARWVTSMVNIFGLNGS 586
Query: 398 KEHLNKNI-------SIAIEKLV--------QERLILLK--------------------- 421
+ I + + R
Sbjct: 587 ATADSTEIGWSGIDVPEEAKPFLYPLSSMRDSLRQAARAKEGVTPETVAEIVSKGDVPEL 646
Query: 422 -----MKKFSS-------------------------ADYIRK-QLESKGFILEDYKNPDN 450
K ++ D +R L G LED +N
Sbjct: 647 DLTESAKPYAELLSNFRTKVSSIQPSESLGKEILALCDRVRDIDLFDLGIYLEDRENLPA 706
Query: 451 GQRMTR 456
R
Sbjct: 707 LVRPVT 712
>gi|170093199|ref|XP_001877821.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164647680|gb|EDR11924.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 796
Score = 157 bits (396), Expect = 4e-36, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 64/113 (56%), Gaps = 1/113 (0%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +++YN+L + TEF + +++ Y CGPTVYD +H+G+AR + D+L R++ Y
Sbjct: 52 EQVLRVYNSLTKTKTEFVPTNGRHVKWYNCGPTVYDASHMGHARNYVTQDILRRIMSD-Y 110
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V N+TDIDDKIIERARQ H + +++ Q
Sbjct: 111 FGYDVHFVMNVTDIDDKIIERARQNHLLDTFRIQTTTLSAALIDQVRDAWRIY 163
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 108/430 (25%), Positives = 169/430 (39%), Gaps = 85/430 (19%)
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ + +F + RL P R T ++P+++ ++ II +G+AYEA + FDT
Sbjct: 261 RSLAAYWEGKFFDEMARLKVREPDIVTRVTEYVPEIVAYVERIIQNGYAYEAEGSVYFDT 320
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEK---------YHKKNPADFILWKRSTPMEPGWESP 207
+ + K++ G R + +++P+DF LWK S P EP W SP
Sbjct: 321 LTFDGTDGHNYAKLEPWSKGNRELLEGGEGALSSRTGRRSPSDFALWKASKPGEPSWPSP 380
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
WG GRPGWHIECS M+S G+ DIH GG DL FPHH+NE+AQ+ N ++H
Sbjct: 381 WGPGRPGWHIECSVMASAIFGENIDIHSGGSDLAFPHHDNEMAQAEAYHNCSPWVNYFLH 440
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV--- 324
G L++EG KMSKS NFITI+E+L + + +RLA L + +DF+
Sbjct: 441 TGHLHIEGLKMSKSLKNFITIDEIL-------QKFTPRQLRLAFLTQLWNSKVDFSESLM 493
Query: 325 -----------------------QRLTEAEILLSKWPQTSTSKGIIDPAVLSAL------ 355
Q E S + +I S
Sbjct: 494 TGEVRNTETTMNNFFTNVKALVSQYRAEGMASDGLHHYESHERELISSLHRSQSAFRAAL 553
Query: 356 YNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNASAHILGI-------- 394
+ NT A+ L + + ++ + G+
Sbjct: 554 CDSFNTPVALDTLRDIVSRTNVYINSRGKALNVPVVENVARWVGEMLRMFGLGEGEKSQI 613
Query: 395 -----EVCKEHLNKNISIAIEKLVQERLILLK---MKK-------FSSADYIRK-QLESK 438
E + + ++ I L R + K + +D +R L
Sbjct: 614 GWGQVEEADTNREEILTPYIRTLSSFRDGVRALAMAKNETSLKDILALSDKLRDVDLVPL 673
Query: 439 GFILEDYKNP 448
G L+D ++
Sbjct: 674 GVALDDQEDG 683
>gi|60302812|ref|NP_001012601.1| cysteinyl-tRNA synthetase, cytoplasmic [Gallus gallus]
gi|82231219|sp|Q5F408|SYCC_CHICK RecName: Full=Cysteinyl-tRNA synthetase, cytoplasmic; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|60098591|emb|CAH65126.1| hypothetical protein RCJMB04_3o5 [Gallus gallus]
Length = 748
Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R FQ + + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 27 SRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRD-YF 85
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
+ V Y NITDIDDKII+R RQ +
Sbjct: 86 KFDVFYCMNITDIDDKIIKRTRQNYL 111
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F KD L L P R + ++P+++ ++ I+ +G+ Y
Sbjct: 203 GSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +Y + +QK K +P DF L
Sbjct: 263 VSNGSVYFDTVKFGSSEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDNWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------QKHTARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK------------WPQTSTSKGIIDPAVL 352
+++ +D+ ++ L K + + + ++
Sbjct: 436 HSWKDTLDYSSNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFY 495
Query: 353 SAL-------YNDLNTVSAIQALHKLARESTKNHDLLP----------------IFNASA 389
++++T S ++ + L +S
Sbjct: 496 DKKAAIHEALCDNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQML 555
Query: 390 HILGIEVCKEHL-------NKNISIA------IEKLVQ----ERLILLKMK---KFSSAD 429
I G + + N+NI+I ++ L + R I + K +D
Sbjct: 556 KIFGAIESDDAIGFPVGGNNQNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|326920114|ref|XP_003206320.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Meleagris
gallopavo]
Length = 748
Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats.
Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R FQ + + Y CGPTVYD +H+G+AR I FD+L R+LR Y
Sbjct: 27 SRLCLYNSLTRNKEIFQPQNGKKVTWYCCGPTVYDASHMGHARSYISFDILRRILRD-YF 85
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
+ V Y NITDIDDKII+R RQ +
Sbjct: 86 KFDVFYCMNITDIDDKIIKRTRQNYL 111
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 177/439 (40%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F KD L L P R + ++P+++ ++ I+ +G+ Y
Sbjct: 203 GSQVTDNSIFSELPKFWEGEFHKDMEALNVLPPDVLTRVSEYVPEIVAFVKKIVDNGYGY 262
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +Y + +QK K +P DF L
Sbjct: 263 VSNGSVYFDTVKFASSEKHSYAKLVPEAVGDQKALQEGEGDLSISADRLCEKHSPNDFAL 322
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS
Sbjct: 323 WKSSKPGEPSWDSPWGKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSE 382
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 383 AYFENDNWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHTARQLRLAFLM 435
Query: 314 THYREPIDF---------TVQRLTEAEILLSK------------WPQTSTSKGIIDPAVL 352
+++ +D+ ++ L K + + + ++
Sbjct: 436 HSWKDTLDYSSNTMESAIQYEKFMNEFFLNVKDILRAPTDVTGQFQKWENQEAELNKNFY 495
Query: 353 SAL-------YNDLNTVSAIQALHKLARESTKNHDLLP----------------IFNASA 389
++++T S ++ + L +S
Sbjct: 496 DKKAAIHEALCDNVDTRSVLEEMRSLVSQSNSYIAAKKSARQMPNRLLLENISCYLTQML 555
Query: 390 HILGIEVCKEHL-------NKNISIA------IEKLVQ----ERLILLKMK---KFSSAD 429
I G + + ++NI+I ++ L + R I + K +D
Sbjct: 556 KIFGAIESDDAIGFPVGGSSQNINIESTVMPYLQVLSEFREGVRQIAREKKVTEVLQLSD 615
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 616 ALRDDILPELGVRFEDHEG 634
>gi|302506132|ref|XP_003015023.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
gi|291178594|gb|EFE34383.1| hypothetical protein ARB_06783 [Arthroderma benhamiae CBS 112371]
Length = 844
Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 64 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 122
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 123 YFKFDVKYIMNITDVDDKIITRGRQQHL 150
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 150/371 (40%), Gaps = 52/371 (14%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ A + I + +T++ +F++D L L P R T +P+++ ++
Sbjct: 266 TLKGASIQGSDHSI---FTRLTTEYENRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVER 322
Query: 139 IILHGHAY-EANNEIIFDTSSIPNYG------SFSRRKIDEQKMGTRVPEKYHKKNPA-- 189
II H Y + + FD + G R ++ +
Sbjct: 323 IIEHKFGYVTPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSS 382
Query: 190 -DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP W SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE
Sbjct: 383 ADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNE 442
Query: 249 IAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
IAQS + N +IH G L+++G KMSKS NF TI + L W
Sbjct: 443 IAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGD-----WTP 497
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
+R+ L+ +R+ I+ T + + K
Sbjct: 498 RSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEELPAAL 557
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+V L + NT A+ A+ +L + + + +I G+
Sbjct: 558 KAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTSEAALSAQNTHAVAKWLTSMVNIFGL 617
Query: 395 EVCKEHLNKNI 405
++NI
Sbjct: 618 NSTAGPDSENI 628
>gi|119479397|ref|XP_001259727.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
gi|119407881|gb|EAW17830.1| cysteinyl-tRNA synthetase [Neosartorya fischeri NRRL 181]
Length = 808
Score = 157 bits (396), Expect = 5e-36, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 60/102 (58%), Gaps = 3/102 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 24 PPLKIWNSLTRSKNPFIPIDPEGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
Y V ++ NITD+DDKII RARQ+H A I ++
Sbjct: 83 YFHFDVKFIMNITDVDDKIILRARQQHLFNEFVSAHPTIAAE 124
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 109/486 (22%), Positives = 172/486 (35%), Gaps = 118/486 (24%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + + + +T K ++F+KD L L P R T + ++ ++ I+ +
Sbjct: 232 KASSINADDHSIFTKLTKKYEERFMKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVENK 291
Query: 144 HAY-EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFIL 193
Y + + FD ++ N G K+ + G + K++ +DF L
Sbjct: 292 FGYVTDDGSVYFDITAFENAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFAL 351
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 352 WKASKPGEPSWTSSWGRGRPGWHIECSAMASAKLGKQMDIHSGGVDLAFPHHDNELAQSE 411
Query: 254 CAD-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
++ N ++H G L+++G KMSKS NF TI E LE + W +R
Sbjct: 412 AYWTHGHSHTDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLR 466
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS---------------------KGII 347
+ L+ +R+ ++ T + ++ K
Sbjct: 467 IVFLLGGWRDGVEITEELVSAGNSWEDKVNNFFIKMKDPATLSGQTSGSDTTLPAALEAA 526
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVC 397
A L + NT A+ A+ +L + + + +I G+
Sbjct: 527 KKATFDHLCDSFNTQGAMSAISELISKYNGADKSTLNPKDVEAVARWVTSMVNIFGLNGS 586
Query: 398 KEHLNKNI-------SIAIEKLV--------QERLILLK--------------------- 421
+ I + + R
Sbjct: 587 ATADSTEIGWSGIDVPEEAKPFLYPLSSMRDSLRQAARAKEGVTPETVAEIVSKGEVPDL 646
Query: 422 -----MKKFSS-------------------------ADYIRK-QLESKGFILEDYKNPDN 450
K ++ D +R L G LED +N
Sbjct: 647 DLTESAKAYAELLSNFRTKVSSIQPSESLGKEILALCDRVRDIDLFDLGIYLEDRENLPA 706
Query: 451 GQRMTR 456
R
Sbjct: 707 LVRPVT 712
>gi|148690120|gb|EDL22067.1| mCG11180, isoform CRA_c [Mus musculus]
Length = 226
Score = 156 bits (395), Expect = 5e-36, Method: Composition-based stats.
Identities = 54/153 (35%), Positives = 81/153 (52%), Gaps = 8/153 (5%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
V +ITD+DDKII+RA + +N + + S ++F +D L L PT R
Sbjct: 97 VVMAMSITDVDDKIIKRANE------MNVTPASLASLFEEEFKQDMAALKVLPPTVYLRV 150
Query: 126 TNHIPQMIYLIQNIILHGHAYEA-NNEIIFDTS 157
T +IPQ+I I+ II HGHAY + FD
Sbjct: 151 TENIPQIIAFIEGIIAHGHAYSTATGSVYFDLH 183
>gi|321252445|ref|XP_003192408.1| cysteine-tRNA ligase [Cryptococcus gattii WM276]
gi|317458876|gb|ADV20621.1| Cysteine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 785
Score = 156 bits (395), Expect = 6e-36, Method: Composition-based stats.
Identities = 41/134 (30%), Positives = 63/134 (47%), Gaps = 1/134 (0%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YN+L R F + + Y CGPTVYD +H+G+AR + D++ R+LR Y
Sbjct: 22 EPALRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIIRRILRD-Y 80
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +V N+TDIDDKII RAR+ + + +T + T+
Sbjct: 81 FNYDVNFVMNVTDIDDKIILRARESYLLDQAISSNPALTPQLISDVEAAFTKYIAKPLKS 140
Query: 122 QPRATNHIPQMIYL 135
P H P
Sbjct: 141 LPTPLEHSPNATSF 154
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 108/441 (24%), Positives = 165/441 (37%), Gaps = 91/441 (20%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ S F D RL L P R + ++P+++ +Q I+ +G AYE + FD
Sbjct: 242 CRRLASYWENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAYEGGGSVWFD 301
Query: 156 TSSIPN-------------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS-TPME 201
+ S K + + K+ PADF LWK P E
Sbjct: 302 VNKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQGKRRPADFALWKAKSKPGE 361
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
P W SPWG GRPGWHIECS M+S LG D+H GG+DL+FPHH+NE+AQ+ ++
Sbjct: 362 PAWPSPWGEGRPGWHIECSVMASAILGSGMDVHSGGVDLMFPHHDNELAQAEAYHGCKQW 421
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L++EG KMSKS NFITI+E L +++ A +RLA ++ + +D
Sbjct: 422 VNYFLHTGHLHIEGLKMSKSLKNFITIDEAL-------QTYSARQLRLAFMLQIWNAKLD 474
Query: 322 FTVQRLTEAEILLSKWPQT-------------------------------STSKGIIDPA 350
F + + + + T
Sbjct: 475 FKKDLIVDTKAKEETFDNFFTNVRARMSDAAALGSNEDGKHHYEEAEKSLMTDLHKAQND 534
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH-------------DLLPIFNASAHILGI--- 394
+AL + NT +AIQ L L + + G+
Sbjct: 535 FRAALCDSFNTPAAIQILLDLISSVNLYFASRGREYNIAPVVTIAQWITRMLRMFGLGEG 594
Query: 395 --------------EVCKEHLNKNISIAIEKLVQERLILLK-------MKK-FSSADYIR 432
E + + + R + + + D R
Sbjct: 595 DVTSGQIGWGKEGDEAAGGDFEGKLDPYLRAMASFRDDIRRLAIEGATAGEILKLCDKFR 654
Query: 433 KQ-LESKGFILEDYKNPDNGQ 452
Q L + G L+D ++ G
Sbjct: 655 DQDLANLGIQLDDGQSATGGA 675
>gi|17509795|ref|NP_491013.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
elegans]
gi|3319446|gb|AAC64633.1| Cysteinyl trna synthetase protein 1, isoform a, partially confirmed
by transcript evidence [Caenorhabditis elegans]
Length = 909
Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F + +R Y+CGPTVYD +H+G+AR + D+L R+ R Y
Sbjct: 182 PQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRD-YF 240
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V ++ NITD+DDKII+RARQ H
Sbjct: 241 GYDVEFIMNITDVDDKIIKRARQSHL 266
Score = 136 bits (343), Expect = 5e-30, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 161/452 (35%), Gaps = 100/452 (22%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + ++F+ D RL L R + ++P++I ++ II +G+AY
Sbjct: 359 GKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAY 418
Query: 147 E-ANNEIIFDTSSIPNYGS------------------FSRRKIDEQKMGTRVPEKYHKKN 187
+ + FDT + K E ++ K++
Sbjct: 419 AAEDGSVYFDTKAFEQNPKHFYAKLVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRS 478
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF LWK S EP W S WG GRPGWHIECS MSS G DIH GG DL FPHH+N
Sbjct: 479 PNDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDN 538
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQ N ++H G L ++G KMSKS NFITI + LE + +
Sbjct: 539 EIAQVEAHYDDPHWVNYFLHCGTLRIQGMKMSKSLKNFITIRKALED-------YTPRQL 591
Query: 308 RLAMLMTHYREPIDF------------------------------TVQRLTEAEILLSKW 337
RL LM ++ + +D+ R + K
Sbjct: 592 RLLFLMHNWADVLDYSSSTMERALQFEKITNEFFLLVKDFLRRHYKPDRSEGYQKFQGKE 651
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDL 381
+ G + V AL + ++T S I+ +L ++
Sbjct: 652 LKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNI 711
Query: 382 LPIFNASAHILG-IEVCKEHLNKNISIA-------------------IEKLVQERLILLK 421
I G I + + ++ L Q R +
Sbjct: 712 AAYITNLLKIFGAIPQSNQEIGFVSEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRL 771
Query: 422 -MKK------FSSADYIRKQ-LESKGFILEDY 445
K+ D +R + L G LED
Sbjct: 772 IAKEHKVNGILEECDTLRDKTLTELGVRLEDR 803
>gi|17509797|ref|NP_491014.1| Cysteinyl tRNA Synthetase family member (crs-1) [Caenorhabditis
elegans]
gi|14574274|gb|AAK68426.1|AF077541_9 Cysteinyl trna synthetase protein 1, isoform b, partially confirmed
by transcript evidence [Caenorhabditis elegans]
Length = 908
Score = 156 bits (394), Expect = 7e-36, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F + +R Y+CGPTVYD +H+G+AR + D+L R+ R Y
Sbjct: 181 PQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRD-YF 239
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V ++ NITD+DDKII+RARQ H
Sbjct: 240 GYDVEFIMNITDVDDKIIKRARQSHL 265
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 108/452 (23%), Positives = 161/452 (35%), Gaps = 100/452 (22%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + ++F+ D RL L R + ++P++I ++ II +G+AY
Sbjct: 358 GKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIISNGYAY 417
Query: 147 E-ANNEIIFDTSSIPNYGS------------------FSRRKIDEQKMGTRVPEKYHKKN 187
+ + FDT + K E ++ K++
Sbjct: 418 AAEDGSVYFDTKAFEQNPKHFYAKLVPEAYGEDSEQLLKNMKESEGELSMSDDRLKSKRS 477
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF LWK S EP W S WG GRPGWHIECS MSS G DIH GG DL FPHH+N
Sbjct: 478 PNDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDN 537
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQ N ++H G L ++G KMSKS NFITI + LE + +
Sbjct: 538 EIAQVEAHYDDPHWVNYFLHCGTLRIQGMKMSKSLKNFITIRKALED-------YTPRQL 590
Query: 308 RLAMLMTHYREPIDF------------------------------TVQRLTEAEILLSKW 337
RL LM ++ + +D+ R + K
Sbjct: 591 RLLFLMHNWADVLDYSSSTMERALQFEKITNEFFLLVKDFLRRHYKPDRSEGYQKFQGKE 650
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDL 381
+ G + V AL + ++T S I+ +L ++
Sbjct: 651 LKLMEEFGKLKSEVHEALCDSVDTRSVIEKFRELISLGNAYIVEKEKEGHVPNCLLLRNI 710
Query: 382 LPIFNASAHILG-IEVCKEHLNKNISIA-------------------IEKLVQERLILLK 421
I G I + + ++ L Q R +
Sbjct: 711 AAYITNLLKIFGAIPQSNQEIGFVSEDECNGEGASTSFNKEAVVMPYLDALAQFREKVRL 770
Query: 422 -MKK------FSSADYIRKQ-LESKGFILEDY 445
K+ D +R + L G LED
Sbjct: 771 IAKEHKVNGILEECDTLRDKTLTELGVRLEDR 802
>gi|296817003|ref|XP_002848838.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238839291|gb|EEQ28953.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 804
Score = 156 bits (394), Expect = 8e-36, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDVNYIMNITDVDDKIITRGRQQHL 110
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 105/378 (27%), Positives = 158/378 (41%), Gaps = 60/378 (15%)
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
+T + +F++D L L P R T +P+++ ++ II H Y + + FD
Sbjct: 243 LTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVERIIEHKFGYVTPDGSVYFDIE 302
Query: 158 SIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S G+ + + + G ++ KK+ ADF LWK S EP W SPW
Sbjct: 303 SFEAAGNSYARLEPWNRNDANLQSEGEGALSNKQAEKKSAADFALWKASKAGEPSWPSPW 362
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA----DRIEKTANI 264
G GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NEIAQS + N
Sbjct: 363 GNGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSPTCSHVQWVNY 422
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
+IH G L+++G KMSKS NF TI + L+ W +R+ L+ +R+ I+ T
Sbjct: 423 FIHMGHLSIQGSKMSKSLKNFTTIRDALQRGD-----WTPRSLRIVFLLGGWRDGIEITD 477
Query: 325 QRLTEAEILLSKWPQTSTSKGI--------------------IDPAVLSALYNDLNTVSA 364
+ + K +V L + NT A
Sbjct: 478 EIVKAGNAWEEKVNNFFIRVKDPSIKLPETTSDEELAAALKSAQDSVHKHLCDSFNTAGA 537
Query: 365 IQALHKLARESTKNHD----------LLPIFNASAHILGIEVCKEHLNKNI---SIAIEK 411
+ A+ +L + ++ + + +I G+ ++NI I
Sbjct: 538 MYAISELITKFNNTNETALSVQNTQAVAKWLTSMVNIFGLNSTAGPDSENIGWYGDEITA 597
Query: 412 --------LVQERLILLK 421
L R L +
Sbjct: 598 EAKPYVYPLSSIRDALRQ 615
>gi|28493283|ref|NP_787444.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
gi|28572606|ref|NP_789386.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|61216627|sp|Q83GH3|SYC2_TROWT RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
Full=Cysteine--tRNA ligase 2; Short=CysRS 2
gi|61216629|sp|Q83HQ8|SYC2_TROW8 RecName: Full=Putative cysteinyl-tRNA synthetase 2; AltName:
Full=Cysteine--tRNA ligase 2; Short=CysRS 2
gi|28410738|emb|CAD67124.1| cysteinyl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|28476324|gb|AAO44413.1| cysteinyl-tRNA synthetase [Tropheryma whipplei str. Twist]
Length = 450
Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats.
Identities = 101/382 (26%), Positives = 176/382 (46%), Gaps = 27/382 (7%)
Query: 7 IYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCV 66
++++ R I + ++ +R+YVCG T Y H+G+A + FD L+RL + V
Sbjct: 6 VFDSRTRSIVK---LEDCLLRLYVCGITPYKSTHLGHAFTYVGFDTLFRL--ALDSGRDV 60
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
Y++NI+DID+ + + A + + + T++F +D L CL P + +
Sbjct: 61 LYIQNISDIDEPLFQYAEK------VGIHYKDLARTQTKRFFEDMHTLECLPPGYVIPVS 114
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+ + I+ +I AY+ N ++ FD++ F ++K + +
Sbjct: 115 KVLDGIKTGIEGLISRNMAYKLPNGDVYFDSTLTDPGKMFC----FDRKTAMSLMLETDT 170
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFP 243
L R EP WE+ +G GRP WHI C+ +S+ V I+GGG DL FP
Sbjct: 171 GKNPFDPLLWRGRGAEPQWEASFGAGRPAWHISCAVLSNLQTQYENVLHIYGGGRDLAFP 230
Query: 244 HHENEIAQSCCA------DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
HHE S + + ++++H G ++ G KMSKS GN + I++L E +
Sbjct: 231 HHEFTNVLSKLIRAPKDNKQQDTVQDVFMHTGLVSYMGDKMSKSKGNLVFISQLREQCEK 290
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
G VIRLA+L HYRE ++ + L + + +++ + I + S
Sbjct: 291 IGLHHS--VIRLALLQRHYREDWEWQDECL-DRAASRFRLWKSALQEYIGAKGIRSTADQ 347
Query: 358 DLNTVSAIQALHKLARESTKNH 379
+ T A + +H +S +H
Sbjct: 348 NKGTQGAWERIHGGVFDSNFDH 369
>gi|212535374|ref|XP_002147843.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
gi|210070242|gb|EEA24332.1| cysteinyl-tRNA synthetase [Penicillium marneffei ATCC 18224]
Length = 798
Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L + F +DP+ + Y CGPTVYD +H+G+AR + D++ R+LR
Sbjct: 22 PSLKIYNSLTKTKVPFVPVDPNGRKVTWYACGPTVYDDSHLGHARNYVTTDIIRRILRD- 80
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII R RQ++
Sbjct: 81 YFKFDVHFVMNITDVDDKIILRGRQQYL 108
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 114/423 (26%), Positives = 172/423 (40%), Gaps = 73/423 (17%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ +T K ++F++D L L P R T + PQ+ ++ I+ + AY
Sbjct: 228 KIDASDYSIFTKLTRKYEERFMRDLRDLNVLDPDELTRVTEYGPQIAQFVERIVENKFAY 287
Query: 147 -EANNEIIFDTSSIPNYG---------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
++ + FD + + G S S K+ + G + K +P+DF LWK
Sbjct: 288 VTSDGSVYFDIKAFEDAGFPYARLEPWSRSDGKLVAEGEGALTSKTTEKHSPSDFALWKA 347
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA- 255
S P EP W S WG+GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 348 SKPGEPSWSSQWGKGRPGWHIECSAMASDRLGKSIDIHSGGIDLAFPHHDNELAQSEAYW 407
Query: 256 --DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
++ N ++H G L+++G KMSKS NF TI E LE + W + +R+ L+
Sbjct: 408 NTHTHDQWINYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KDWTSRSLRIVFLL 462
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID---------------------PAVL 352
++ I+ T + K +D AV
Sbjct: 463 GNWNSGIEITEDVINFGNSWEDKLNNFFLKMKDLDLLKKSSSGTDQSLGEALEATKAAVN 522
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILGIEVCKEHLN 402
L + NT +A+ A+ L + + +I G+
Sbjct: 523 EHLSDSFNTPAAMAAISDLVTKFNSADKATVNPEHVEQMGKWVTSMVNIFGLNGAAPPDA 582
Query: 403 KN-----ISIAIEK------LVQERLILLKMKKFSSADYIRKQ-LESKGFILEDYKNPDN 450
I + E L R D +R++ L +G + D KN
Sbjct: 583 SEIGWSGIDVPEEAKPYLYPLSALR------------DSLREKALSKEGISVADIKNIIT 630
Query: 451 GQR 453
Q
Sbjct: 631 SQE 633
>gi|302657026|ref|XP_003020246.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
gi|291184058|gb|EFE39628.1| hypothetical protein TRV_05685 [Trichophyton verrucosum HKI 0517]
Length = 804
Score = 156 bits (393), Expect = 9e-36, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDVKYIMNITDVDDKIITRGRQQHL 110
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 150/371 (40%), Gaps = 52/371 (14%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ A + I + +T + +F++D L L P R T +P+++ ++
Sbjct: 226 TLKGASIQGSDHSI---FTRLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVER 282
Query: 139 IILHGHAY-EANNEIIFDTSSIPNYG------SFSRRKIDEQKMGTRVPEKYHKKNPA-- 189
II H Y + + FD + G R ++ +
Sbjct: 283 IIEHKFGYVTPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSS 342
Query: 190 -DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP W SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE
Sbjct: 343 ADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNE 402
Query: 249 IAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
IAQS + N +IH G L+++G KMSKS NF TI + L+ W
Sbjct: 403 IAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALQRGD-----WTP 457
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
+R+ L+ +R+ I+ T + + K
Sbjct: 458 RSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEELPAAL 517
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+V L + NT A+ A+ +L + + + +I G+
Sbjct: 518 KAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTSEAALSAQNTHAVAKWLTSMVNIFGL 577
Query: 395 EVCKEHLNKNI 405
++NI
Sbjct: 578 NSTAGPDSENI 588
>gi|327292372|ref|XP_003230885.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326466921|gb|EGD92374.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 804
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDVRYIMNITDVDDKIITRGRQQHL 110
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 151/371 (40%), Gaps = 52/371 (14%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ A + I + +T + +F++D L L P R T +P+++ ++
Sbjct: 226 TLKGASIQGSDHSI---FTRLTREYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVER 282
Query: 139 IILHGHAY-EANNEIIFDTSSIPNYG------SFSRRKIDEQKMGTRVPEKYHKKNPA-- 189
II H Y + + FD + G R ++ +
Sbjct: 283 IIEHKFGYVTPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAEKKSS 342
Query: 190 -DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP W SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE
Sbjct: 343 ADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNE 402
Query: 249 IAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
IAQS + N +IH G L+++G KMSKS NF TI + L W
Sbjct: 403 IAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGD-----WTP 457
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
+R+ L+ +R+ I+ T + + K
Sbjct: 458 RSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRVKDPSVKLPETTSDEELPAAL 517
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+V L + NT A+ A+ +L + ++ + +I G+
Sbjct: 518 KAAQHSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGL 577
Query: 395 EVCKEHLNKNI 405
+ ++NI
Sbjct: 578 NSTAKPDSENI 588
>gi|326480593|gb|EGE04603.1| cysteinyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 790
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDVKYIMNITDVDDKIITRGRQQHL 110
Score = 124 bits (310), Expect = 4e-26, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 151/371 (40%), Gaps = 52/371 (14%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ A + I + +T + +F++D L L P R T +P+++ ++
Sbjct: 226 TLKGASIQGSDHSI---FTRLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVER 282
Query: 139 IILHGHAY-EANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVPEKYHKKNPA---- 189
II H Y + + FD + +Y ++ + K
Sbjct: 283 IIEHKFGYVTPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSS 342
Query: 190 -DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP W SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE
Sbjct: 343 ADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNE 402
Query: 249 IAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
IAQS + N +IH G L+++G KMSKS NF TI + L W
Sbjct: 403 IAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGD-----WTP 457
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
+R+ L+ +R+ I+ T + + K
Sbjct: 458 RSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVKLPETTSDEELPAAL 517
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+V L + NT A+ A+ +L + ++ + +I G+
Sbjct: 518 KAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGL 577
Query: 395 EVCKEHLNKNI 405
++NI
Sbjct: 578 NSTAGPDSENI 588
>gi|255728717|ref|XP_002549284.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
gi|240133600|gb|EER33156.1| cysteinyl-tRNA synthetase [Candida tropicalis MYA-3404]
Length = 786
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 111/449 (24%), Positives = 184/449 (40%), Gaps = 89/449 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +++ +D RL L P+ R + ++P +I + II +G
Sbjct: 236 KEFGATVTDPQIFKKLPSYWEKRYNEDMARLNVLPPSITTRVSEYVPDIIEFVDKIIENG 295
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK---------KNPADFILW 194
+AY + ++ + + K+ G + ++ ADF LW
Sbjct: 296 YAYATEDGSVYFDTVKYEHSKHEYAKLQPWSKGDLSLINDGEGSLSTGNTKRSSADFALW 355
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W+S WG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 356 KASKPGEPSWDSKWGKGRPGWHIECSVMASDIGGETLDIHSGGIDLCFPHHDNELAQSEA 415
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++HNG L+++G+KMSKS NFITI+E L + + A +RL +
Sbjct: 416 YFDNKQWINYFMHNGHLHIQGQKMSKSLKNFITIDEAL-------KDFSARQLRLVFALN 468
Query: 315 HYREPIDFTVQRLTEAEILLSKW--------------------------------PQTST 342
+ +P+DF + E + + + + Q
Sbjct: 469 PWEKPLDFKDSLIHEVKSIEATFSKFFTNIRALNSDYKHKVDNGEYVSRKIGDVEKQLYK 528
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
V A ++L++ AI+ L L ++ L
Sbjct: 529 DLANASEEVDIAFNDNLSSGQAIRVLQDLVSKANTYIQLTSSGNPELRIEVLISITHWIV 588
Query: 387 ASAHILGIEVCKEHLNKNISIA-----------------IEKLVQERLILLK---MK--- 423
ILG E+ + L ++ L Q R + K
Sbjct: 589 KILDILGFEIRSDKLGWIDDAEQSTNGSGASTEDIALPYVKALAQFRDSVRNLAINKAEL 648
Query: 424 -KF-SSADYIRKQLESKGFILEDYKNPDN 450
+F ++D IR QL + G L+D + +
Sbjct: 649 TEFLKASDAIRSQLVNLGVSLDDRPDGTS 677
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 54/201 (26%), Positives = 85/201 (42%), Gaps = 15/201 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +K+YN+L R EF I P I Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 47 KPTLKLYNSLTRSKNEFHPIKPGQITWYSCGPTVYDHSHMGHARNYVSTDISRRILQD-Y 105
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ +++N+TDIDDKII ARQ++ +T++ KD L
Sbjct: 106 FGYHINFIQNVTDIDDKIIIAARQQYLFEEK------LTNQY-----KDINDDLKLKSKE 154
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+ ++ + + + NN I + + + I K+
Sbjct: 155 YLK--FYVEKNLPEFNGDLEKDFINWTNNGI-PNMAELVKEKPKLPMFIKAAKLAHETIY 211
Query: 182 KYHKKNPADFILWKRSTPMEP 202
+K N D L K P
Sbjct: 212 NSNKINSIDEYLTKIKDVAMP 232
>gi|268565691|ref|XP_002639522.1| Hypothetical protein CBG04128 [Caenorhabditis briggsae]
gi|187036303|emb|CAP24909.1| CBR-CARS-1 protein [Caenorhabditis briggsae AF16]
Length = 584
Score = 156 bits (393), Expect = 1e-35, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F + +R Y+CGPTVYD +H+G+AR + D+L R+ R Y
Sbjct: 27 PQLTVYNSLTRQKEVFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRD-YF 85
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V ++ NITD+DDKII+RARQ H
Sbjct: 86 GYDVEFIMNITDVDDKIIKRARQSHL 111
Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats.
Identities = 93/337 (27%), Positives = 141/337 (41%), Gaps = 36/337 (10%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + ++F+ D RL L R + ++P++I ++ II +G+AY
Sbjct: 204 GKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAY 263
Query: 147 E-ANNEIIFDTSSIPNYGS------------------FSRRKIDEQKMGTRVPEKYHKKN 187
+ + FDT + + E ++ K+N
Sbjct: 264 AAEDGSVYFDTKAFEQNPKHFYAKLVPEAYGDDSELLLKNMREGEGELSMSDERLKSKRN 323
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF LWK S EP W S WG GRPGWHIECS MSS G DIH GG DL FPHH+N
Sbjct: 324 PTDFALWKSSKDGEPFWPSEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDN 383
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQ N ++H G L ++G KMSKS NFITI + LE + +
Sbjct: 384 EIAQVEAHYDDPHWVNYFLHCGTLRIQGMKMSKSLKNFITIRKALED-------YTPRQL 436
Query: 308 RLAMLMTHYREPIDF---------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
RL LM ++ + +D+ +++T LL K K +
Sbjct: 437 RLLFLMHNWADVLDYSSSTMERALQFEKITNEFFLLVKDFLRRHYKPDRSEGYQKYQARE 496
Query: 359 LNTVSAIQAL-HKLARESTKNHDLLPIFNASAHILGI 394
L ++ L ++ + D + ++G+
Sbjct: 497 LKLMAEFGNLKSEVHAALCDSVDTRTVIEKFRELIGL 533
>gi|121712962|ref|XP_001274092.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
gi|119402245|gb|EAW12666.1| cysteinyl-tRNA synthetase [Aspergillus clavatus NRRL 1]
Length = 808
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 24 PPLKIWNSLTRSKTPFVPIDPEAKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y V ++ NITD+DDKII RARQ+H
Sbjct: 83 YFHFDVKFIMNITDVDDKIILRARQQHL 110
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 97/356 (27%), Positives = 150/356 (42%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T K +F+KD L L P R T + ++ ++ I+ + Y + + F
Sbjct: 244 FTKLTKKYEDRFLKDMRDLNVLDPDELTRVTEYGAEIADFVEKIVANKFGYVTDDGSVYF 303
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G K+ + G + K++ +DF LWK S P EP W
Sbjct: 304 DINAFEAAGHPYARLEPWSRSDNKLLAEGEGALTKKTTEKRSASDFALWKASKPGEPSWT 363
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-----RIEK 260
S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS ++
Sbjct: 364 SSWGRGRPGWHIECSAMASARLGKEMDIHSGGVDLAFPHHDNELAQSEAYWSHDHSHTDQ 423
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
N ++H G L+++G KMSKS NF TI E LE + W +R+ L+ +R+ +
Sbjct: 424 WVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGGWRDGV 478
Query: 321 DFTVQRLTEAEILLSKWPQTSTS---------------------KGIIDPAVLSALYNDL 359
+ T + ++ K AV L +
Sbjct: 479 EITEELVSAGNSWEEKVNNFFIKIRDPATLQAQTSGTDTTLPAALEAGRKAVHEHLCDSF 538
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + + G+ + I
Sbjct: 539 NTQGAMFAISELISKYNGADKSTLNAKDVEAVARFVTSMVNTFGLNGNATPESAEI 594
>gi|326469078|gb|EGD93087.1| cysteinyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 804
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDVKYIMNITDVDDKIITRGRQQHL 110
Score = 124 bits (310), Expect = 5e-26, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 151/371 (40%), Gaps = 52/371 (14%)
Query: 79 IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
++ A + I + +T + +F++D L L P R T +P+++ ++
Sbjct: 226 TLKGASIQGSDYSI---FTRLTKEYEDRFMQDVRDLNVLDPDEITRVTEFMPEIVSFVER 282
Query: 139 IILHGHAY-EANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVPEKYHKKNPA---- 189
II H Y + + FD + +Y ++ + K
Sbjct: 283 IIEHKFGYVTPDGSVYFDIENFEAAGNSYARLEPWNRNDANRQSEGEGSLSNKQAKKKSS 342
Query: 190 -DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP W SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE
Sbjct: 343 ADFALWKASKAGEPSWPSPWGNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNE 402
Query: 249 IAQSCCA----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
IAQS + N +IH G L+++G KMSKS NF TI + L W
Sbjct: 403 IAQSEAYWSSTCSHVQWVNYFIHMGHLSIQGSKMSKSLKNFTTIRDALRRGD-----WTP 457
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------------ 346
+R+ L+ +R+ I+ T + + K
Sbjct: 458 RSLRIVFLLGGWRDGIEITDEIVKAGNAWEEKVNNFFIRAKDPSVKLLETTSDEELPAAL 517
Query: 347 --IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIFNASAHILGI 394
+V L + NT A+ A+ +L + ++ + +I G+
Sbjct: 518 KAAQDSVHKHLCDSFNTAGAMYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGL 577
Query: 395 EVCKEHLNKNI 405
++NI
Sbjct: 578 NSTAGPDSENI 588
>gi|308505978|ref|XP_003115172.1| CRE-CARS-1 protein [Caenorhabditis remanei]
gi|308259354|gb|EFP03307.1| CRE-CARS-1 protein [Caenorhabditis remanei]
Length = 770
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F + +R Y+CGPTVYD +H+G+AR + D+L R+ R Y
Sbjct: 28 PQLTVYNSLTRQKEIFVPNEGKRVRWYICGPTVYDSSHMGHARSYLSLDILRRVFRD-YF 86
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V ++ NITD+DDKII+RARQ H
Sbjct: 87 GYDVEFIMNITDVDDKIIKRARQSHL 112
Score = 134 bits (337), Expect = 3e-29, Method: Composition-based stats.
Identities = 107/452 (23%), Positives = 160/452 (35%), Gaps = 100/452 (22%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + ++F+ D RL L R + ++P++I ++ II +G+AY
Sbjct: 205 GKDVRDHSVFDDLAKTYEKEFLADMARLNVLPVDVLTRVSEYVPEVITYVKKIINNGYAY 264
Query: 147 E-ANNEIIFDTSSIPNYGS------------------FSRRKIDEQKMGTRVPEKYHKKN 187
+ + FDT + + E ++ K+N
Sbjct: 265 AAEDGSVYFDTKAFEQNPKHFYAKLVPEAYGDDSEQLLKNMREGEGELSMSDERLKSKRN 324
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
P DF LWK S EP W S WG GRPGWHIECS MSS G DIH GG DL FPHH+N
Sbjct: 325 PTDFALWKSSKDGEPFWSSEWGNGRPGWHIECSVMSSAICGSKLDIHAGGFDLKFPHHDN 384
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
EIAQ N ++H G L ++G KMSKS NFITI + LE + +
Sbjct: 385 EIAQVEAHYDDPHWVNYFLHCGTLRIQGMKMSKSLKNFITIRKALED-------YTPRQL 437
Query: 308 RLAMLMTHYREPIDF---------TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
RL LM ++ + +D+ +++T LL K K +
Sbjct: 438 RLLFLMHNWADVLDYSSSTMERALQFEKITNEFFLLVKDYLRRHYKPDRSEGYQKYQARE 497
Query: 359 L---------------------NTVSAIQALHKLARESTKN----------------HDL 381
L +T + I+ +L ++
Sbjct: 498 LKLMDEFGKLKSEVHGALCDSVDTRTVIEKFRELIGLGNAYIVEKEKDGHVPNCLLLRNI 557
Query: 382 LPIFNASAHILG-IEVCKEHLNKNISIA-------------------IEKLVQERLILLK 421
I G I + + ++ L Q R +
Sbjct: 558 AAYITNLLKIFGAIPQSSQEIGFVSEDECNGEGATTSFNKEDIVMPYLDALAQFREKVRN 617
Query: 422 -MKK------FSSADYIRKQ-LESKGFILEDY 445
K+ D +R + L G LED
Sbjct: 618 IAKEHKVNGILEECDVLRDKTLTELGVRLEDR 649
>gi|190347294|gb|EDK39538.2| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
6260]
Length = 769
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYN+L R TEF + P+++ Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 34 LMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQD-YFGY 92
Query: 65 CVTYVRNITDIDDKIIERARQEH------------PSIPINDAISIITSKNTQQFVKDTT 112
VT+V+N+TDIDDKII ARQE+ + P+ + + + D
Sbjct: 93 NVTFVQNVTDIDDKIIVAARQEYLFEQKLANVHDSVTEPLLKQGREFLAYYINKNLSDFN 152
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+ ++ + + + + A A+ ++++D++++ I +
Sbjct: 153 QNIEKDLVAWTQSLDITALAVSSPKLPMHVKAATAAH-KVLYDSAALNTPLPTFLESIRD 211
Query: 173 QKMGTRVPEKYHKKNPADFILWKR 196
+K + D ++K+
Sbjct: 212 V--AMPALDKEYGSTVNDPSIFKK 233
Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats.
Identities = 120/443 (27%), Positives = 183/443 (41%), Gaps = 80/443 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +F +D RL L PT+ R + +IP+++ ++ II +G
Sbjct: 219 KEYGSTVNDPSIFKKLPSYWEGKFNEDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNG 278
Query: 144 HAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK----------YHKKNPADFI 192
AY + + FDT+ N K+ G KKNPADF
Sbjct: 279 FAYPTKDGSVYFDTAKFENDPKHDYAKLQPWNKGDMSLINDGEGSLSLGQESKKNPADFA 338
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP W+S WG GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 339 LWKASKPGEPAWDSKWGPGRPGWHIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQS 398
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG------------- 299
E+ N ++HNG L+++G+KMSKS NFITI + L
Sbjct: 399 EAYFNNEQWVNYFMHNGHLHIQGQKMSKSLKNFITIEQALNDFTSRQMRLVFAMSAWDRP 458
Query: 300 -----------RSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+++ + + + YR+ D L + Q
Sbjct: 459 LDFKDSLIKEIKAYESTMSKFFTNVRAFYRDHRDLISNGELPPTKLGEEEKQLHKDLKKA 518
Query: 348 DPAVLSALYNDLNTVSAIQALHKLAREST-------------KNHDLLPIFN---ASAHI 391
V +A ++L++ A++ L L ++ + LL + N I
Sbjct: 519 QDDVHNAFCDNLSSHVALRVLSDLVSKTNNYIQSRSADASKLRIESLLAVTNWTVRILSI 578
Query: 392 LGIEVCKEHLN-KNISIA---------------IEKLVQERLILLK---MKKFSSADYI- 431
LG + + L + S ++ L Q R + K +SAD I
Sbjct: 579 LGFKTRPDGLGWSDDSSETSSGAGSVEELAMPYVKALSQFRDSVRTLAIDK--ASADRIL 636
Query: 432 ------RKQLESKGFILEDYKNP 448
R +L + G L+D N
Sbjct: 637 SECDGVRGKLINLGVSLDDRPNG 659
>gi|317154053|ref|YP_004122101.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
gi|316944304|gb|ADU63355.1| cysteine synthase [Desulfovibrio aespoeensis Aspo-2]
Length = 771
Score = 155 bits (392), Expect = 1e-35, Method: Composition-based stats.
Identities = 92/494 (18%), Positives = 168/494 (34%), Gaps = 70/494 (14%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
I +++ + + +Y GP + + + R ++V DVL R LR E
Sbjct: 302 ITLFDMATGATKPLK--TQGGLGLYTMGPNLDNPDGLDAWRRVVVLDVLARHLRSLGVET 359
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAP--THQ 122
++D+DD+ + AR + A + ++ ++ +A
Sbjct: 360 --RAAVGLSDMDDRTLTAARHTDADRAVFAA--GLRARIMERARDMGVAVAGGDGAGVDF 415
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
P ++N + + L + ++ G AYE + FD YG +D+ G V
Sbjct: 416 PLSSNSEGKALELCRKLLGKGLAYEKLRSVYFDIFRDKRYGEIGAMDMDKVSGGRTVDLD 475
Query: 183 YH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K NP DF L KR+T E+ WG RP W ++ +A + L D+ G
Sbjct: 476 AYVKDNPLDFTLLKRATLLDLKRGEVLETEWGNVRPSWFLQHAATALTSL-PRIDVMIGS 534
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
FPH EN A A R L + ++ T+ + L +
Sbjct: 535 EKHRFPHLENLRAIWSAAGRE---------LQAWLLNHQATDCADATLTTVADTLGGFR- 584
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------ 345
R +L + R+P+ + L + + +
Sbjct: 585 --------AARFWLLSSACRKPLCASSDNLVMWARNWRRVQEALAALSAPRTGAAPSGES 636
Query: 346 -------------IIDPAVLSALYNDLNTVSAIQALHKLARESTK-----------NHDL 381
+ +A+ DL L + ++
Sbjct: 637 AGKIPGEADQAVFDLRAGFKTAMNEDLALHRFWPVLFRFVKQVNAWAAAGALTGPAASAC 696
Query: 382 LPIFNASAHILGIEVCKEHLN--KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKG 439
L A ILGI + ++ I ++ ++ +R + K F+++D +R Q+ + G
Sbjct: 697 LDELLAVDAILGILDHAQMPLPLADLPIEVQGMLADRQKAREAKDFAASDALRDQIANAG 756
Query: 440 FILEDYKNPDNGQR 453
F LED R
Sbjct: 757 FRLEDTAGAPRVFR 770
>gi|146416571|ref|XP_001484255.1| hypothetical protein PGUG_03636 [Meyerozyma guilliermondii ATCC
6260]
Length = 769
Score = 155 bits (391), Expect = 1e-35, Method: Composition-based stats.
Identities = 50/204 (24%), Positives = 94/204 (46%), Gaps = 16/204 (7%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYN+L R TEF + P+++ Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 34 LMIYNSLTRTKTEFNTLVPNHVTWYCCGPTVYDHSHMGHARNYVSTDISRRILQD-YFGY 92
Query: 65 CVTYVRNITDIDDKIIERARQEH------------PSIPINDAISIITSKNTQQFVKDTT 112
VT+V+N+TDIDDKII ARQE+ + P+ + + + D
Sbjct: 93 NVTFVQNVTDIDDKIIVAARQEYLFEQKLANVHDSVTEPLLKQGREFLAYYINKNLSDFN 152
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
+ ++ + + + + A A+ ++++D++++ I +
Sbjct: 153 QNIEKDLVAWTQSLDITALAVSSPKLPMHVKAATAAH-KVLYDSAALNTPLPTFLESIRD 211
Query: 173 QKMGTRVPEKYHKKNPADFILWKR 196
+K + D ++K+
Sbjct: 212 V--AMPALDKEYGSTVNDPSIFKK 233
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 118/443 (26%), Positives = 180/443 (40%), Gaps = 80/443 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +F +D RL L PT+ R + +IP+++ ++ II +G
Sbjct: 219 KEYGSTVNDPSIFKKLPSYWEGKFNEDMARLNVLPPTYTTRVSEYIPEIMAFVEKIISNG 278
Query: 144 HAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK----------YHKKNPADFI 192
AY + + FDT+ N K+ G KKNPADF
Sbjct: 279 FAYPTKDGSVYFDTAKFENDPKHDYAKLQPWNKGDMSLINDGEGSLSLGQESKKNPADFA 338
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP W+S WG GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 339 LWKASKPGEPAWDSKWGPGRPGWHIECSVMASDITGETMDIHSGGIDLCFPHHDNELAQS 398
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG------------- 299
E+ N ++HNG L+++G+KMSKS NFITI + L
Sbjct: 399 EAYFNNEQWVNYFMHNGHLHIQGQKMSKSLKNFITIEQALNDFTSRQMRLVFAMSAWDRP 458
Query: 300 -----------RSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+++ + + + YR+ D L + Q
Sbjct: 459 LDFKDSLIKEIKAYESTMSKFFTNVRAFYRDHRDLISNGELPPTKLGEEEKQLHKDLKKA 518
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SAHI 391
V +A ++L++ A++ L L ++ L + I
Sbjct: 519 QDDVHNAFCDNLSSHVALRVLLDLVSKTNNYIQLRSADASKLRIESLLAVTNWTVRILSI 578
Query: 392 LGIEVCKEHLN-KNISIA---------------IEKLVQERLILLK---MKKFSSADYI- 431
LG + + L + S ++ L Q R + K +SAD I
Sbjct: 579 LGFKTRPDGLGWSDDSSETSSGAGSVEELAMPYVKALSQFRDSVRTLAIDK--ASADRIL 636
Query: 432 ------RKQLESKGFILEDYKNP 448
R +L + G L+D N
Sbjct: 637 SECDGVRGKLINLGVSLDDRPNG 659
>gi|156405455|ref|XP_001640747.1| predicted protein [Nematostella vectensis]
gi|156227883|gb|EDO48684.1| predicted protein [Nematostella vectensis]
Length = 634
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 39/91 (42%), Positives = 56/91 (61%), Gaps = 1/91 (1%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++K+YN+L R+ F + + Y CGPTVYD +H+G+AR I FD++ R+L+ Y
Sbjct: 17 ELKLYNSLTREKNLFIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQ-SYFN 75
Query: 64 KCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V V N+TDIDDKII RAR+ H +
Sbjct: 76 YDVFCVMNVTDIDDKIIHRARRNHLQEKYRE 106
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 108/439 (24%), Positives = 177/439 (40%), Gaps = 82/439 (18%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + +T Q++ KD L L T ++P+++ I+ +I +G+AY
Sbjct: 191 GSDVTDHRIFAKLTEFWEQEYHKDMAALNVLPADILTNITEYVPEVVTFIEKVIANGYAY 250
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY----------HKKNPADFILWKR 196
E+N + FDT + S ++ + +G K++ DF LWK
Sbjct: 251 ESNGSVYFDTIKFGSSEKHSYARLVPEAVGDLDALAEGEGELSQNLGEKRSERDFALWKA 310
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP WESPWG+GRPGWH+ECS M+ LG DI GG++L FP H+NE+AQS
Sbjct: 311 SKPGEPSWESPWGKGRPGWHVECSVMARDGLGSKIDIPTGGVNLKFPPHDNELAQSEAHF 370
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
+ + N ++H G L +EG KMSKS NFITI + L+ + IRLA L+ +
Sbjct: 371 CVSQWVNYFLHAGHLTIEGCKMSKSLKNFITIKQALKRN-------SSRQIRLAFLLHTW 423
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------------------D 348
+D++ + EAE + + + I
Sbjct: 424 NATLDYSQNVIREAEQVEKLFNDFFLAVKDILRKPEVKAPGSHNYHELEKDLQSKFHEKK 483
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHIL 392
V AL + ++T A++ + L + S + I
Sbjct: 484 DGVHQALCDSIDTPGALRHMQDLVKLSNIYISNKKQRNESANKQLLEGVAKYITQMLKIF 543
Query: 393 GIEVCKEHLNKNISIA-------------IEKLVQ----ERLILLKMK---KFSSADYIR 432
G ++ + ++ ++ L R I + K + D +R
Sbjct: 544 GANEGEQLIGFGSAVQQSGGNQEEVALPYVQLLADFREDIRAIAREEKVPRILKACDDLR 603
Query: 433 K-QLESKGFILEDYKNPDN 450
+L G +LED +
Sbjct: 604 DNKLVDVGVLLEDQEGDQK 622
>gi|71406898|ref|XP_805952.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70869553|gb|EAN84101.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 785
Score = 155 bits (391), Expect = 2e-35, Method: Composition-based stats.
Identities = 118/445 (26%), Positives = 178/445 (40%), Gaps = 80/445 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E + + F +D RL P R T ++PQ++ IQ I+ +G
Sbjct: 223 EREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDNG 282
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNP 188
AY + I FDT++ G + ++ E + V K+N
Sbjct: 283 FAYRGTSSIFFDTTAFLRAGHDYPKLKPVSESGENDATEAEMAEGEGALTVGVAGEKRNA 342
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S P EP W SPWG GRPGWHIECS M+S LG D+H GG DL FPHH+NE
Sbjct: 343 NDFALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNE 402
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
AQS + N ++H G L+++G KMSKS NFITI + L+ V+R
Sbjct: 403 CAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDV-----TPRVMR 457
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------- 347
L L H+ +P++F+ Q + EA+ S I+
Sbjct: 458 LLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGETQGLNGHDRRLQE 517
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAH 390
+ AV AL N+ +T +A+ ++ L + +
Sbjct: 518 TWLTAENAVHGALQNNFDTPAAMDSVMGLVGATNHYLLSGERPSATLVRKVGRYVTRILQ 577
Query: 391 ILGI--------EVCKEHLNKNISIAIEKLVQ----ERLILLKMK---KF-SSADYIRKQ 434
+ G+ ++ + + ++ L++ R K F D +R +
Sbjct: 578 VFGVVEGNDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVEKCTGTFLPLCDAVRDE 637
Query: 435 -LESKGFILEDYKNPDNGQRMTRWK 458
L G +ED T WK
Sbjct: 638 WLVPAGIRIEDNPAGP-----TTWK 657
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +++ N+L + F + +R Y CGPTVY+ +H+G+AR + FD+L R++ Y
Sbjct: 37 KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMED-YF 95
Query: 63 EKCVTYVRNITDIDDKIIERAR 84
V Y NITDIDDKII+RAR
Sbjct: 96 GYQVVYQMNITDIDDKIIKRAR 117
>gi|58263374|ref|XP_569097.1| cysteine-tRNA ligase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134108600|ref|XP_776953.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259636|gb|EAL22306.1| hypothetical protein CNBB4810 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223747|gb|AAW41790.1| cysteine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 785
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 61/134 (45%), Gaps = 1/134 (0%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +++YN+L R F + + Y CGPTVYD +H+G+AR + D++ R+LR Y
Sbjct: 22 EPVLRVYNSLTRSKDVFVPTNGRRVDWYNCGPTVYDSSHMGHARNYLTQDIVRRILRD-Y 80
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
V +V N+TDIDDKII RAR+ + +T + T+
Sbjct: 81 FNYDVNFVMNVTDIDDKIILRARESYLLDQAISTNLALTPELISDVEAAFTKYLAKPLKS 140
Query: 122 QPRATNHIPQMIYL 135
H P
Sbjct: 141 LTAPLEHSPNATSF 154
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 110/444 (24%), Positives = 166/444 (37%), Gaps = 97/444 (21%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ S F D RL L P R + ++P+++ +Q I+ +G AYE + FD
Sbjct: 242 CRRLASYWENAFFTDMARLRVLPPDTITRVSEYVPEIVSFVQRIVDNGFAYEGGGSVWFD 301
Query: 156 T-------------SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS-TPME 201
S K + + K+ PADF LWK P E
Sbjct: 302 VDKFEGAEGDGFRHEYAKLQPSSKGNKKLLDEGEGALTGSQGKRRPADFALWKAKSKPGE 361
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
P W SPWG GRPGWHIECS M+S LG DIH GG+DL+FPHH+NE+AQ+ ++
Sbjct: 362 PAWPSPWGEGRPGWHIECSVMASAILGSGMDIHSGGVDLMFPHHDNELAQAEAYHGCKQW 421
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L++EG KMSKS NFITI+E L +++ A +RLA ++ + +D
Sbjct: 422 VNYFLHTGHLHIEGLKMSKSLKNFITIDEAL-------QTYSARQLRLAFMLQIWNAKLD 474
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGI-------------------------------IDPA 350
F + + + + T+
Sbjct: 475 FKKDLIVDTKAKEETFDNFFTNVKARMSDAAARGPNEDGKHHYEEAEKSLMADFHKAQND 534
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH-------------DLLPIFNASAHILGI--- 394
+AL + NT +AIQ L L + + G+
Sbjct: 535 FRAALCDSFNTPAAIQILLDLVSSVNLYFASRGREYNIAPVVTVAQWITRMLRMFGLGEG 594
Query: 395 --------------EVCKEHLNKNISIAIEKLVQERLILLK-----------MKKFSSAD 429
E + + + R + + +K D
Sbjct: 595 DVTSGQIGWGKEGDEASGGDFEGKLDPYLRAMASFRDDIRRLAIDGATPGEILK---LCD 651
Query: 430 YIRKQ-LESKGFILEDYKNPDNGQ 452
R Q L + G L+D ++ G
Sbjct: 652 KFRDQDLANLGIQLDDGQSTTGGA 675
>gi|308198189|ref|XP_001387132.2| cysteinyl-tRNA synthetase [Scheffersomyces stipitis CBS 6054]
gi|149389073|gb|EAZ63109.2| cysteinyl-tRNA synthetase [Pichia stipitis CBS 6054]
Length = 776
Score = 154 bits (390), Expect = 2e-35, Method: Composition-based stats.
Identities = 41/87 (47%), Positives = 57/87 (65%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +KIYN+L R TEF I P +I Y CGPTVYD +H+G+AR + D+ R+ + Y
Sbjct: 35 KPVLKIYNSLTRSKTEFVPIVPGHITWYCCGPTVYDHSHMGHARNYVSTDICRRIFQD-Y 93
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
V +++N+TDIDDKII ARQ++
Sbjct: 94 FGYNVKFIQNVTDIDDKIIIAARQQYL 120
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 113/448 (25%), Positives = 178/448 (39%), Gaps = 89/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +F +D RL L T R + +IP +I I II +G
Sbjct: 226 KEFGSTVNDPSIFRKLPSFWENKFDQDMARLNVLPSTVTTRVSEYIPDIIEFIDKIIENG 285
Query: 144 HAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----------KNPADFI 192
Y + + FDT+ N + K+ G + K+ ADF
Sbjct: 286 FGYPTKDGSVYFDTAKFENDPNHDYAKLQPWNKGDMSLINDGEGSLTTGQDTKKSSADFA 345
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP W S WG GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 346 LWKASKPGEPSWPSKWGEGRPGWHIECSVMASDITGQTMDIHSGGIDLCFPHHDNELAQS 405
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++ N ++H+G L+++G+KMSKS NFITI + LE + + +RL
Sbjct: 406 EAYFDNKQWVNYFMHSGHLHIQGQKMSKSLKNFITIEQALED-------FSSRQLRLVFA 458
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA------------------ 354
++ + +P+DF ++E + + S + + T+ ++
Sbjct: 459 LSSWEKPLDFKDSLISEVKTIESAFSKFFTNVRALNNDYKHKVNDGEFVSKKLSKYEKQL 518
Query: 355 --------------LYNDLNTVSAIQALHKLARESTKNHDLLPI---------------- 384
++L + A++A+ L +S L
Sbjct: 519 YDDLDIAQDEVDVAFNDNLASGQALRAIQILISKSNNYIQLAASGETELRIDVLLQVTRW 578
Query: 385 FNASAHILGIEVCKEHLNKNISIA---------------IEKLVQERLILL-----KMKK 424
ILG E + L S ++ L Q R + K
Sbjct: 579 IVKILEILGFEARADRLGWVDSSEAGEGAGSTEDIALPYVKALSQFRDAVRNLAISKADN 638
Query: 425 ---FSSADYIRKQLESKGFILEDYKNPD 449
+ D IR L + L+D +
Sbjct: 639 SEILKACDTIRSDLINLSVSLDDRPSGA 666
>gi|328351033|emb|CCA37433.1| cysteinyl-tRNA synthetase [Pichia pastoris CBS 7435]
Length = 741
Score = 154 bits (389), Expect = 3e-35, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R F + + + Y CGPTVYD +H+G+AR + D+ R+L+ +
Sbjct: 18 LKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQD-FFGY 76
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ +V+N+TDIDDKII +ARQE+ + S IT++ Q + T
Sbjct: 77 NIKFVQNVTDIDDKIILKARQEYLFKEFSKKYSEITNELKQFALGSWNSYVAKNLTDFKG 136
Query: 125 ATNHI 129
+++
Sbjct: 137 DSSNF 141
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 114/438 (26%), Positives = 178/438 (40%), Gaps = 86/438 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ + +S Q++ +D RL L T R + ++P+++ +Q II G+AY
Sbjct: 197 GSTVTDPEIFKQTSSYWEQRYDEDMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAY 256
Query: 147 -EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---------RVPEKYHKKNPADFILWKR 196
+ + FDT+ K+ + K+N ADF LWK
Sbjct: 257 VTKDGSVYFDTTQFDTNEKHDYAKLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKS 316
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W+SPWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 317 SKPGEPSWKSPWGQGRPGWHIECSVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARF 376
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
++ N ++H G L++EG+KMSKS NFITI+E L + A +RL + +
Sbjct: 377 DCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALS-------KYSARQLRLCFALVQW 429
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTS--------------------------------K 344
+DF L E + + + +
Sbjct: 430 NNQLDFKESLLNEVRSIEATFNNFFNNVRGLNNDYNSKLASGQIISKKFGPAEKNLLTKL 489
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHI 391
+ V S+ ++L+T +++L L +ES + +
Sbjct: 490 SEVQAKVYSSFCDNLSTPQVVRSLLDLIQESNNYISAIGTEIRVQPLLQTAFYITRILSV 549
Query: 392 LGIEVCKEHLNKNISIA---------------IEKLVQERLILLKM---KK----FSSA- 428
LG + ++L ++ L R + K K F A
Sbjct: 550 LGFQNRPDNLGWINEDQQDGQGSNREDTVLPFVQALSSFRDFVRKSAISKDDYKVFLDAT 609
Query: 429 DYIRK-QLESKGFILEDY 445
D IR L G +L+D
Sbjct: 610 DKIRDVDLLKLGVVLDDR 627
>gi|322816399|gb|EFZ24717.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 721
Score = 154 bits (388), Expect = 3e-35, Method: Composition-based stats.
Identities = 118/445 (26%), Positives = 180/445 (40%), Gaps = 80/445 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E + + F +D RL P R T ++PQ++ IQ I+ +G
Sbjct: 223 EREGQYVTDQSIFEDHARLYERLFFEDMRRLGIRDPDVVSRVTEYVPQVVDFIQKIMDNG 282
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNP 188
AY + I FDT++ G + ++ E + V K+N
Sbjct: 283 FAYRGTSSIFFDTTAFLRAGHDYPKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRNA 342
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S P EP W SPWG GRPGWHIECS M+S LG D+H GG DL FPHH+NE
Sbjct: 343 NDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNE 402
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
AQS + N ++H G L+++G KMSKS NFITI + L+ V+R
Sbjct: 403 CAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDV-----TPRVMR 457
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------- 347
L L H+ +P++F+ Q + EA+ S I+
Sbjct: 458 LLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGETQGLNDHDRRLQE 517
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAH 390
+ AV +AL N+ +T +A+ ++ L + + +
Sbjct: 518 TWLTAENAVHAALQNNFDTPAAMDSVMGLVGATNRYLLSGERPSATLVRKVGRYVTRILQ 577
Query: 391 ILGI--------EVCKEHLNKNISIAIEKLVQ----ERLILLKMK---KF-SSADYIRKQ 434
+ G+ ++ + + ++ L++ R K F D +R +
Sbjct: 578 VFGVVEGTDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVEKCTETFLPLCDTVRDE 637
Query: 435 -LESKGFILEDYKNPDNGQRMTRWK 458
L G +ED T WK
Sbjct: 638 WLVPAGIRIEDNPAGP-----TTWK 657
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +++ N+L + F + +R Y CGPTVY+ +H+G+AR + FD+L R++ Y
Sbjct: 37 KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMED-YF 95
Query: 63 EKCVTYVRNITDIDDKIIERAR 84
V Y NITDIDDKII+RAR
Sbjct: 96 GYQVVYQMNITDIDDKIIKRAR 117
>gi|164658560|ref|XP_001730405.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
gi|159104301|gb|EDP43191.1| hypothetical protein MGL_2200 [Malassezia globosa CBS 7966]
Length = 823
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 39/115 (33%), Positives = 54/115 (46%), Gaps = 1/115 (0%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R F + Y CGPTVYD +H+G+AR + DV+ R++R Y
Sbjct: 22 PELHVYNSLTRSKERFVPKRGRLVTWYNCGPTVYDASHMGHARNYVTQDVIRRIMRD-YL 80
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
V +V N+TDIDDKII RARQE +T
Sbjct: 81 GYDVNFVMNVTDIDDKIIMRARQEFLLQQFRSQHPHLTHALLDAVQAAWNHYFRE 135
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 100/463 (21%), Positives = 157/463 (33%), Gaps = 110/463 (23%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN------ 149
+ + F D RL PT R + ++P+++ I+ I+ +G AY +
Sbjct: 249 FRKLAAYWEAAFFHDMKRLHVEPPTILTRVSEYVPEIVQFIERILQNGFAYVDDASAESK 308
Query: 150 ----------NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKN 187
+ N + + K+N
Sbjct: 309 NVWFATSQFDGSACVAGALAENQPEAREHHFYAKLAPWSKGNRELLEEGEGALAAKGKRN 368
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN 247
ADF LWKR+ P EP W SPWG GRPGWHIECS M+S LG DIH GG+DL+FPHH+N
Sbjct: 369 AADFALWKRAKPGEPAWPSPWGPGRPGWHIECSVMASKVLGSQIDIHSGGIDLMFPHHDN 428
Query: 248 EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
E+AQS + N ++H G L++EG KMSKS NFI+I+E L +
Sbjct: 429 ELAQSEAFHGCPQWINYFLHTGHLHIEGLKMSKSLKNFISIDEALARYTARQLRLAFLMH 488
Query: 308 RLAMLMTHYREPI----------------------DFTVQRLTEAEILLSKWPQTSTSKG 345
M + ++ + ++ P
Sbjct: 489 PWHAKMDFRESGMAQVRAAETSLNNFFHGVIALEREYRAKGPAYSDGQHHYGPDAQAVAS 548
Query: 346 IIDPAVLSA---LYNDLNTVSAIQALHKLARESTKNH--------------DLLPIFNAS 388
++ A L + ++ +T I L L + ++
Sbjct: 549 ALEDAQLQFRAAMCDNFDTPRGIDILLDLVSRANVYERGTTRENLHVGVLVNVAQYVAHI 608
Query: 389 AHILGIEVCKEHLNKNIS----------------------------IAIEK--------- 411
+LG+ + ++S +
Sbjct: 609 VRMLGLG-EGPARDGDLSWGHAPRASSATDTASSTSLSLDDSALDRDEVAAPFVRVLSSF 667
Query: 412 LVQERLILLKMK---KF-SSADYIRK-QLESKGFILEDYKNPD 449
+ R + +F AD IR +L G LED ++
Sbjct: 668 RDRVRQLARTNASSSEFLKLADTIRDMELVDLGVALEDQEDGQ 710
>gi|330924798|ref|XP_003300783.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
gi|311324916|gb|EFQ91133.1| hypothetical protein PTT_12131 [Pyrenophora teres f. teres 0-1]
Length = 798
Score = 153 bits (387), Expect = 4e-35, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 4 KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+K++N+L R +F IDP ++ Y CGPTVYD AH+G+AR + D+L R+L + Y
Sbjct: 21 KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAH-Y 79
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V+NITD+DDKII R RQ+H +T + +K
Sbjct: 80 YGYNVKFVQNITDVDDKIILRGRQQHLLAKFKAENPTVTEEVIDTTIKAFDAY 132
Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats.
Identities = 99/366 (27%), Positives = 151/366 (41%), Gaps = 53/366 (14%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T K +F +D L L P R T + +++ + II +G AY
Sbjct: 227 IDASDHSVFTTLTKKYEARFNEDMRNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYS 286
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-----------HKKNPADFILWK 195
++ + FD + +++ G + K+N +DF LWK
Sbjct: 287 TSDGSVYFDIENFEKKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWK 346
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
S P EP W+SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 347 SSKPGEPAWDSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAY 406
Query: 256 ---DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
D + N ++H G L++ G KMSKS NF TI E L W A +R+ L
Sbjct: 407 WQKDGGAQWVNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGD-----WNARSLRIIFL 461
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----------------------P 349
+ + + I+ T S ++
Sbjct: 462 LGGWHDGIEITPDMRKSGSSWESYVTNFFYKVRDLEVHPNITSTATEDEKVLKSFESAKE 521
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKE 399
V SAL + +T +A++A+ L + D+ I G++ +
Sbjct: 522 KVHSALADSFDTPTAMRAIASLITDYNSADKAGLSDSVSFDVARYITRMVRIFGLDGKAD 581
Query: 400 HLNKNI 405
+ I
Sbjct: 582 PYDGGI 587
>gi|254567071|ref|XP_002490646.1| Essential protein of unknown function [Pichia pastoris GS115]
gi|238030442|emb|CAY68366.1| Essential protein of unknown function [Pichia pastoris GS115]
Length = 761
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 39/125 (31%), Positives = 67/125 (53%), Gaps = 1/125 (0%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K++N+L R F + + + Y CGPTVYD +H+G+AR + D+ R+L+ +
Sbjct: 38 LKLFNSLTRTKVPFIPTNANEVTWYSCGPTVYDSSHMGHARNYVTIDINRRILQD-FFGY 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ +V+N+TDIDDKII +ARQE+ + S IT++ Q + T
Sbjct: 97 NIKFVQNVTDIDDKIILKARQEYLFKEFSKKYSEITNELKQFALGSWNSYVAKNLTDFKG 156
Query: 125 ATNHI 129
+++
Sbjct: 157 DSSNF 161
Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats.
Identities = 114/438 (26%), Positives = 178/438 (40%), Gaps = 86/438 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ + +S Q++ +D RL L T R + ++P+++ +Q II G+AY
Sbjct: 217 GSTVTDPEIFKQTSSYWEQRYDEDMERLNILPATVTTRVSEYVPEIVEFVQGIIDRGYAY 276
Query: 147 -EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT---------RVPEKYHKKNPADFILWKR 196
+ + FDT+ K+ + K+N ADF LWK
Sbjct: 277 VTKDGSVYFDTTQFDTNEKHDYAKLQPWNKADLELLKEGEGSLSSNDGKRNSADFALWKS 336
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W+SPWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 337 SKPGEPSWKSPWGQGRPGWHIECSVMASDITGESMDIHSGGIDLAFPHHDNELAQSEARF 396
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
++ N ++H G L++EG+KMSKS NFITI+E L + A +RL + +
Sbjct: 397 DCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEALS-------KYSARQLRLCFALVQW 449
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTS--------------------------------K 344
+DF L E + + + +
Sbjct: 450 NNQLDFKESLLNEVRSIEATFNNFFNNVRGLNNDYNSKLASGQIISKKFGPAEKNLLTKL 509
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAHI 391
+ V S+ ++L+T +++L L +ES + +
Sbjct: 510 SEVQAKVYSSFCDNLSTPQVVRSLLDLIQESNNYISAIGTEIRVQPLLQTAFYITRILSV 569
Query: 392 LGIEVCKEHLNKNISIA---------------IEKLVQERLILLKM---KK----FSSA- 428
LG + ++L ++ L R + K K F A
Sbjct: 570 LGFQNRPDNLGWINEDQQDGQGSNREDTVLPFVQALSSFRDFVRKSAISKDDYKVFLDAT 629
Query: 429 DYIRK-QLESKGFILEDY 445
D IR L G +L+D
Sbjct: 630 DKIRDVDLLKLGVVLDDR 647
>gi|328849314|gb|EGF98497.1| hypothetical protein MELLADRAFT_46041 [Melampsora larici-populina
98AG31]
Length = 791
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 41/84 (48%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +K+YN+L + T+F P I Y CGPTVYD +H+G+AR + D+L R+ R Y
Sbjct: 13 KGLKLYNSLTKSKTDFIPRIPGKISWYNCGPTVYDASHMGHARNYVAQDILRRITRD-YF 71
Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
+ + +V NITDIDDKII+RAR+E
Sbjct: 72 KYEINFVMNITDIDDKIIKRAREE 95
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 122/490 (24%), Positives = 187/490 (38%), Gaps = 124/490 (25%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
D+L + L + G ITD KI + +K F +D
Sbjct: 214 DILSKYLDHQSGST-------ITD--HKI----------------FKSLATKWEHSFFED 248
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
L PT R +++IPQ+ I I+ +G+AYE+N I FD + + S +
Sbjct: 249 MKSLNVEPPTVLTRVSDYIPQIESFISQIMENGYAYESNGSIYFDVLAFDHSTLRSDPSL 308
Query: 171 DEQKMGTRVPEKYH-----------------KKNPADFILWKRSTPMEPGWESPWGRGRP 213
K + K++ ADF LWKRS EP WES WG+GRP
Sbjct: 309 HHTYAKLSPSSKTNLKLIKEGEGGLSSLMDSKRSTADFALWKRSKAGEPEWESRWGKGRP 368
Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
GWHIECS M+S LG DIH GG+DL+FPHH+NE+AQS + N ++H G L++
Sbjct: 369 GWHIECSVMASEVLGNGMDIHSGGVDLMFPHHDNELAQSEAYHDCHQWVNYFLHTGHLHI 428
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
EG KMSKS NFITI + L + A +R++ + + +DF ++E +
Sbjct: 429 EGLKMSKSLKNFITIQDAL-------KRHSARQLRISFIGQRWDLGMDFAESSMSEVKNQ 481
Query: 334 LSKWPQTS---------------------------------TSKGIIDPAVLSALYNDLN 360
S +S V + + N
Sbjct: 482 ESSLINFFAVLKALKYESENEDGSVVNEKVDEKDELYVHLKSSLEEAKVQVHQSFCDSYN 541
Query: 361 TVSAIQALHKLARESTK-----------------NHDLLPIFNASAHILGI--------- 394
T A + L L + K ++ + G+
Sbjct: 542 TPEAFRHLLSLINITNKVISSQVSWIRSGKGNLIVEEIGLWITEILGVFGLVESEGRDGF 601
Query: 395 -------EVCKEHLNKNISIAIE-----KLVQE--RLILLKMKK-FSSADYIRK-QLESK 438
++ +E + + + I+ +++ R L K K S D +R +L
Sbjct: 602 KKSLVGWDLVEESEERIVKVLIDWSKFRDQIRKLSRDELKKSKSVLSLCDKLRDSELIGV 661
Query: 439 GFILEDYKNP 448
G L+D +
Sbjct: 662 GVALDDQDDG 671
>gi|317035121|ref|XP_001401149.2| cysteinyl-tRNA synthetase [Aspergillus niger CBS 513.88]
Length = 804
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R T F +DP ++ Y CGPTVYD AH+G+AR + D+L R+LR
Sbjct: 21 PPLKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRD- 79
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII R RQ+H
Sbjct: 80 YFKFDVEFVMNITDVDDKIILRGRQQHL 107
Score = 125 bits (315), Expect = 1e-26, Method: Composition-based stats.
Identities = 97/395 (24%), Positives = 155/395 (39%), Gaps = 63/395 (15%)
Query: 86 EHPSIP--INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
E +IP ++ + +T K F++D L L P R T + Q+ ++ I+ +
Sbjct: 228 EGSTIPGDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVANK 287
Query: 144 HAY-EANNEIIFDTSSIPNYGS--------FSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
Y ++ + FD + G+ + + + KK+ DF LW
Sbjct: 288 FGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGEGALSRATEKKSSDDFALW 347
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W S WG+GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 348 KASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELAQSEA 407
Query: 255 AD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++ N ++H G L+++G KMSKS NF T+ + LE + +R+ L
Sbjct: 408 YWCEHKQQWVNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGD-----YTPRSLRIVFL 462
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------------------ 348
+ +R+ ++ T + A K
Sbjct: 463 LGGWRDGVEITDDLIKNASSWEEKLNNFFVKAKDPSSFRSSDEAPTSSSETLSQALKSTQ 522
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASA-------HILGIEVCK 398
V + +T + A+ +L L + + I G+
Sbjct: 523 EKVHEYFCDSFDTPKVMAAISELVTTFNALDSQTLDLKVVESMGTWVTQIVTIFGLNGAA 582
Query: 399 EHLN-------KNISIAIEK----LVQERLILLKM 422
+ +I A ++ L R L +
Sbjct: 583 SSDSCGIGWEGTDIPEAAKRFLYPLSAMRDTLRQA 617
>gi|196019398|ref|XP_002118971.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
gi|190577490|gb|EDV18543.1| hypothetical protein TRIADDRAFT_62948 [Trichoplax adhaerens]
Length = 257
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 93/256 (36%), Positives = 139/256 (54%), Gaps = 15/256 (5%)
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
+ SPW GRPGWHIECS MS YLG FDIHGGG+DL+F HHENEIAQS C + K
Sbjct: 1 MFFASPWSDGRPGWHIECSVMSKKYLGDNFDIHGGGIDLVFXHHENEIAQSVCESKSNKF 60
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
AN W+HNGFL + KMSKS NFIT+ ELL+ + +R L +YR+P+D
Sbjct: 61 ANYWVHNGFLTVNSEKMSKSLKNFITVKELLD------KGVGGAELRYFYLTANYRKPLD 114
Query: 322 FTVQRLTEAEILLSKWPQTSTSKG--------IIDPAVLSALYNDLNTVSAIQALHKLAR 373
F + L +++ +SK+ + + L + +DLNT A+ +H+LA
Sbjct: 115 FNEKALLDSKKSISKFQKCIQKFNIKFDEISYELPDEFLKYISDDLNTPLALSFIHQLAN 174
Query: 374 ES-TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
++ N + LG+++ ++ + I+ + L ++R L K + AD +R
Sbjct: 175 KALDGNENSANDVYNCCKFLGLDIKEKEEDIYITQEVINLAEKRKQLKIDKNWQEADKVR 234
Query: 433 KQLESKGFILEDYKNP 448
++E G+ + D K+
Sbjct: 235 IEIEKLGYKVIDIKDG 250
>gi|50550761|ref|XP_502853.1| YALI0D15268p [Yarrowia lipolytica]
gi|49648721|emb|CAG81041.1| YALI0D15268p [Yarrowia lipolytica]
Length = 743
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 46/221 (20%), Positives = 88/221 (39%), Gaps = 1/221 (0%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L R T F I + + Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 23 LKLYNSLTRSKTAFVPIAGNKVTWYCCGPTVYDSSHMGHARNYVSTDINRRILQD-YFGY 81
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V +V+N+TDIDDKII R RQ+H + ++ + + + A +
Sbjct: 82 DVLFVQNVTDIDDKIIIRGRQQHLFQKYVEENKGLSQEVLSKVLSSWNDFAKDKLGYTDE 141
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + + A N ++ I + +
Sbjct: 142 VADFEKYVESETTKLKSIEDAKFKMNLASAQAAAKALTDKTVTPDIFYPAVKDVLVLTLD 201
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSH 225
++ + K + WE + + ++ ++++
Sbjct: 202 QEQGSTVSDHKIFRELSAFWEGEFDKDMAKLNVLAPSVTTR 242
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 113/438 (25%), Positives = 198/438 (45%), Gaps = 79/438 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+++ ++ + +++ +F KD +L LAP+ R + ++P+++ ++ II +G
Sbjct: 202 QEQGSTVSDHKIFRELSAFWEGEFDKDMAKLNVLAPSVTTRVSEYVPEIVEYVEKIIDNG 261
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH-------KKNPADFILWKR 196
+AY +++ + FDT++ +++ + + + E K+N +DF LWK
Sbjct: 262 YAYVSDSGVYFDTAAFDKSHDYAKLQPWNKGHADLIDEGEGSLSNKTGKRNSSDFALWKA 321
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP W+SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 322 SKPGEPFWDSPWGQGRPGWHIECSVMASAILGPQMDIHSGGIDLAFPHHDNELAQSEAHY 381
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
++ N ++H G L++EG+KMSKS NFITI+E L +++ +RLA + +
Sbjct: 382 DCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEAL-------QTYSPRQLRLAFALQQW 434
Query: 317 REPIDFTVQRLTEAEILLSKWPQTS--------------------------------TSK 344
+DF ++E + + S + + +
Sbjct: 435 NNQLDFKSALISEVKSVESTFSKFFAKVRALKGEVEDKVSKGVLVSKKTGPAELALLNAL 494
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH--------------DLLPIFNASAH 390
AV AL ++L T +AIQ + +L + D+ +
Sbjct: 495 SDCKEAVHIALCDNLATPAAIQNMVQLVGKVNLYLGETSTENVRTEILVDVATFISKMFA 554
Query: 391 ILGIEVCKEHLN---KNISIAIEKLV------------QER--LILLKMK-KFSSA-DYI 431
+ G ++L ++ + E L+ R + +F A D +
Sbjct: 555 VFGFRTRTDNLGFTEESSEASSEALIMPYLTTLRNFRDDIRGKAMARAAHLEFLQATDQV 614
Query: 432 RKQLESKGFILEDYKNPD 449
R L +G L+D +
Sbjct: 615 RFDLLKQGVSLDDRGVGE 632
>gi|327354912|gb|EGE83769.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 844
Score = 153 bits (387), Expect = 5e-35, Method: Composition-based stats.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 59 PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 117
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
Y + V ++ NITD+DDKII R RQ+H + + K + + +
Sbjct: 118 YFKFDVKFIMNITDVDDKIISRGRQQHFFTEFVYSHPTVDDKVIEIALSAYSAY 171
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 147/356 (41%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ + K +F++D L L P R T ++P+++ ++ II H Y ++ + F
Sbjct: 275 FTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYF 334
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++ ADF LWK S EP W
Sbjct: 335 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWP 394
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 395 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHW 454
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 455 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLGGWKDGIE 509
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------------------LSALYNDL 359
T + K +L +
Sbjct: 510 ITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPGSKENTFAVALKSAQDAVHQSLCDSF 569
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + +I G+ I
Sbjct: 570 NTAGAMYAISELISKYNIADKSTLAIKDVQEAATWVTSMVNIFGLNGSASPTTSEI 625
>gi|167535910|ref|XP_001749628.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772020|gb|EDQ85679.1| predicted protein [Monosiga brevicollis MX1]
Length = 473
Score = 153 bits (386), Expect = 6e-35, Method: Composition-based stats.
Identities = 103/411 (25%), Positives = 154/411 (37%), Gaps = 71/411 (17%)
Query: 6 KIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+I N+L R++ I + Y CGPTVYD AH+G+A + D L R+L
Sbjct: 40 QITNSLTRQVEPL-PIPSGRPLYWYQCGPTVYDDAHLGHAMSHLRLDALRRILEAAG--V 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ ++TDIDDKII RA + + Q F D +L L P R
Sbjct: 97 SLIQAMSVTDIDDKIIARAHANQ------RNWQDLAREMEQHFWDDMAKLNVLPPHLPLR 150
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ H+ +I IQNI+ HAY A + I+ + + + E P +
Sbjct: 151 VSEHMNSIITFIQNILDRNHAYAAEDGSIYFDVTAFGLDRYGPFGLSESNAQDAEPRAHD 210
Query: 185 KKNPADFILWKR-STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
++P DF LWK EPG+ESP+GRGRPG C
Sbjct: 211 IRSPRDFALWKASRHSDEPGFESPFGRGRPG----CC----------------------- 243
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
++H G L L KMSKS GN +I L
Sbjct: 244 ---------------------FVHTGMLLLNSVKMSKSLGNSRSIRAFLADH-------S 275
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
A +R L +Y +D T + + AE + K Q + A +D
Sbjct: 276 ADSLRYIALQGYYDTSLDLTSELIDGAESAVRKLAQFVARTRQLAKLESKAQASDYKESV 335
Query: 364 AIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ 414
+ L RE L IF L + + ++ ++ ++++Q
Sbjct: 336 RLL----LQREFNTGGALQRIFREMRE-LKLGTVSKQVDPGVTARAQEVLQ 381
>gi|315049511|ref|XP_003174130.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311342097|gb|EFR01300.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 804
Score = 153 bits (386), Expect = 7e-35, Method: Composition-based stats.
Identities = 41/88 (46%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KI+N+L R T F +DP + Y CGPTVYD AH+G+AR + D++ R+LR
Sbjct: 24 PPLKIWNSLTRSKTPFVPLDPEGKKVTWYACGPTVYDDAHLGHARNYVSADIVRRILRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + + Y+ NITD+DDKII R RQ+H
Sbjct: 83 YFKFDINYIMNITDVDDKIITRGRQQHL 110
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 105/378 (27%), Positives = 156/378 (41%), Gaps = 60/378 (15%)
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIFDTS 157
+T + +F+KD L L P R T +P+++ ++ II H Y + + FD
Sbjct: 243 LTREYEDRFMKDVRDLNVLDPDEITRVTEFMPEIVSFVERIIDHKFGYVTPDGSVYFDIE 302
Query: 158 SIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S G+ + + G+ ++ KK+ ADF LWK S EP W SPW
Sbjct: 303 SFEAAGNNYARLEPWNRNDANLQSEGEGSLSNKQAEKKSSADFALWKASKAGEPSWPSPW 362
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA----DRIEKTANI 264
G GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NEIAQS + N
Sbjct: 363 GNGRPGWHIECSAMASSRLGKQMDIHSGGIDLAFPHHDNEIAQSEAYWSPTCSHVQWVNY 422
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
+IH G L+++G KMSKS NF TI + L+ W +R+ L+ +R+ I+ T
Sbjct: 423 FIHMGHLSIQGSKMSKSLKNFTTIRDALQRGD-----WTPRSLRIVFLLGGWRDGIEITE 477
Query: 325 QRLTEAEILLSKWPQTSTSKGI--------------------IDPAVLSALYNDLNTVSA 364
+ + K V L + NT A
Sbjct: 478 EIVKAGNAWEEKVNNFFIRVKDPSVKLPETTQDEELPAALKAAQDNVHKHLCDSFNTAGA 537
Query: 365 IQALHKLARESTKNHDL----------LPIFNASAHILGIEVCKEHLNKNI---SIAIEK 411
+ A+ +L + ++ + +I G+ ++ I I +
Sbjct: 538 MYAISELITKFNNTNEAALSAQNTHAVAKWLTSMVNIFGLNSTAGPDSEKIGWYGDEIAE 597
Query: 412 --------LVQERLILLK 421
L R L +
Sbjct: 598 EAKPYVFPLSTIRDALRQ 615
>gi|115433550|ref|XP_001216912.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
gi|114189764|gb|EAU31464.1| hypothetical protein ATEG_08291 [Aspergillus terreus NIH2624]
Length = 811
Score = 152 bits (385), Expect = 7e-35, Method: Composition-based stats.
Identities = 43/88 (48%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP-SNIR-MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R+ ++ IDP Y CGPTVYD AH+G+AR + D+L R+L+
Sbjct: 23 PPLKIYNSLTRRKDDYVPIDPEGKATTWYTCGPTVYDDAHMGHARNYVSTDILRRILKD- 81
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y V YV NITDIDDKII R RQ++
Sbjct: 82 YFGYQVKYVMNITDIDDKIILRGRQQYL 109
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 109/481 (22%), Positives = 166/481 (34%), Gaps = 124/481 (25%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T K ++F +D L L P R T ++PQ++ I+ +I G AY
Sbjct: 230 IDSNDHSIFTRLTEKFEKRFFEDMNSLNVLYPDVLTRVTEYVPQVVSFIEKVIASGFAYA 289
Query: 147 EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ + FD + G + + G+ + K++ +DF LWK S
Sbjct: 290 TPDGSVYFDIEAFEKAGHNYARLEPWNRNDKSLLADGEGSLTNKTTVKRSESDFALWKAS 349
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W SPW GRPGWHIECS M+S LGK DIH GG DL FPHH+NE+AQS
Sbjct: 350 KPGEPSWPSPWAPGRPGWHIECSVMASDVLGKAIDIHSGGADLRFPHHDNELAQSEAYWS 409
Query: 258 IEK---TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
N +IH G L+++G KMSKS NF TI L W + +R+ L+
Sbjct: 410 TGPRVQWVNYFIHTGHLSIQGMKMSKSLKNFTTIRAALSQG-----QWTSRSLRICFLLG 464
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------------- 347
+ ++ T L K I
Sbjct: 465 PWEAGVEVTEDLLKTTTSWEGKLNNFFLKSKEIARNQATGNSSSATNTEGDKQLLAALEK 524
Query: 348 -DPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK 398
+ +AL + T A++A+ +L E D L I G++
Sbjct: 525 AKSDLHAALCDSFYTPGAMRAISELVSEFNIAKDVSDATVLELARWVTRMVTIFGLDAEG 584
Query: 399 EHLNK--------NISIAIEKLV--------QERLILL---------------------- 420
+ + ++ + + + Q R +
Sbjct: 585 DLNDPSRVGWSGLDLPASAQAYIYPVSNLRDQIRQMARGGSVDYAAISQLADTSVPTSPP 644
Query: 421 ------------------------------KMKK-FSSADYIRKQ-LESKGFILEDYKNP 448
K + D +R L + G +ED P
Sbjct: 645 ATVDATSPDPYQKVSEQFRQDVKELASKNAASKDLLALCDQLRDTHLWNLGIYIEDRDAP 704
Query: 449 D 449
Sbjct: 705 T 705
>gi|189206896|ref|XP_001939782.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187975875|gb|EDU42501.1| cysteinyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 797
Score = 152 bits (385), Expect = 8e-35, Method: Composition-based stats.
Identities = 44/113 (38%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 4 KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+K++N+L R +F IDP ++ Y CGPTVYD AH+G+AR + D+L R+L + Y
Sbjct: 21 KLKVWNSLTRTKNDFIPIDPEGKEVKWYSCGPTVYDDAHLGHARNYVTNDILRRILAH-Y 79
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V+NITD+DDKII R RQ+H +T + +K
Sbjct: 80 YGYNVKFVQNITDVDDKIILRGRQQHLLAKFKAENPSVTREVIDTTIKAFDAY 132
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 107/474 (22%), Positives = 167/474 (35%), Gaps = 117/474 (24%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T K +F +D L L P R T + +++ + II +G AY
Sbjct: 227 IDASDHSVFTTLTKKYEARFNEDMQNLNVLEPDVVTRVTEYGNEIVSFVDKIIKNGMAYS 286
Query: 147 EANNEIIFDTSSI----PNYGSFSRRKIDEQKMGTRVPEK------YHKKNPADFILWKR 196
++ + FD + +Y + + K+N +DF LWK
Sbjct: 287 TSDGSVYFDIENFEKEGNHYARLEPWNRGDTNLQADGEGALSSVKTSEKRNDSDFALWKS 346
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA- 255
S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 347 SKPGEPAWNSPWGPGRPGWHIECSVMASAVLGEQMDIHSGGIDLCFPHHDNELAQSEAYW 406
Query: 256 --DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
D + N ++H G L++ G KMSKS NF TI E L W A +R+ L+
Sbjct: 407 QKDGGAQWVNYFLHMGHLSISGSKMSKSLKNFTTIREALSRGD-----WNARSLRIIFLL 461
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-----------------------PA 350
+ + I+ T S ++
Sbjct: 462 GGWHDGIEITPDMRKSGSSWESYVTNFFYKVRDLEVHPNITSTATEDEKVLKSFESAKEK 521
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEH 400
V +AL + +T +A++A+ L + D+ I G++ +
Sbjct: 522 VHNALADSFDTPTAMRAISSLITDYNSADKAGLSDSVSFDVARYITRMVRIFGLDGKADP 581
Query: 401 LNKNI-----------------------------------SIAIEKLVQERLILLK---- 421
+ I ++ ++ + +
Sbjct: 582 YDGGIGWAGIDIPSAAKEHVYAVSRERDEVRQHAIAGDLSEDVLDSIISQHNAAKRQDMD 641
Query: 422 ------------------------MKKF-SSADYIRKQ-LESKGFILEDYKNPD 449
K + D +R L G LED +N
Sbjct: 642 ALPYAEVLTTFQQNLKTLASKKAPAKDYLDLCDQLRDTHLWDLGIYLEDRENAP 695
>gi|134081832|emb|CAK42087.1| unnamed protein product [Aspergillus niger]
Length = 729
Score = 152 bits (385), Expect = 9e-35, Method: Composition-based stats.
Identities = 42/88 (47%), Positives = 58/88 (65%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R T F +DP ++ Y CGPTVYD AH+G+AR + D+L R+LR
Sbjct: 21 PPLKVWNSLTRSKTPFVPLDPKGRKVKWYACGPTVYDDAHLGHARNYVSTDILRRILRD- 79
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII R RQ+H
Sbjct: 80 YFKFDVEFVMNITDVDDKIILRGRQQHL 107
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 108/441 (24%), Positives = 169/441 (38%), Gaps = 75/441 (17%)
Query: 86 EHPSIP--INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
E +IP ++ + +T K F++D L L P R T + Q+ ++ I+ +
Sbjct: 199 EGSTIPGDAHEIFTKLTKKYEDHFMRDMRDLNVLDPDAVTRVTEYGQQIADFVEKIVANK 258
Query: 144 HAY-EANNEIIFDTSSIPNYGS--------FSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
Y ++ + FD + G+ + + + KK+ DF LW
Sbjct: 259 FGYVTSDGSVYFDIKAFEEAGNHYARLEPWNRNNQPLLRDGEGALSRATEKKSSDDFALW 318
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W S WG+GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 319 KASRPGEPSWSSKWGQGRPGWHIECSAMASSCLGSQIDIHSGGIDLAFPHHDNELAQSEA 378
Query: 255 AD--RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++ N ++H G L+++G KMSKS NF T+ + LE + +R+ L
Sbjct: 379 YWCEHKQQWVNYFLHMGHLSIQGSKMSKSLKNFTTVKDALERGD-----YTPRSLRIVFL 433
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID------------------------ 348
+ +R+ ++ T + A K
Sbjct: 434 LGGWRDGVEITDDLIKNASSWEEKLNNFFVKAKDPSSFRSSDEAPTSSSETLSQALKSTQ 493
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNHD---LLPIFNASA-------HILGIEVCK 398
V + +T + A+ +L L + + I G+
Sbjct: 494 EKVHEYFCDSFDTPKVMAAISELVTTFNALDSQTLDLKVVESMGTWVTQIVTIFGLNGAA 553
Query: 399 EHLN-------KNISIAIEK----LVQERLILLKM----------KK-FSSADYIRK-QL 435
+ +I A ++ L R L + K S D +R L
Sbjct: 554 SSDSCGIGWEGTDIPEAAKRFLYPLSAMRDTLRQAAILDDTKQASKDILSLCDRLRNVDL 613
Query: 436 ESKGFILEDYKNPDNGQRMTR 456
+ G LED +N R
Sbjct: 614 FNLGIYLEDRENKPALVRPVT 634
>gi|294657639|ref|XP_459935.2| DEHA2E14476p [Debaryomyces hansenii CBS767]
gi|199432842|emb|CAG88179.2| DEHA2E14476p [Debaryomyces hansenii]
Length = 780
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/84 (45%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ IYN+L R EF + ++I Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 43 LHIYNSLTRSKDEFIPLRNNHITWYCCGPTVYDHSHMGHARNYVSTDICRRILQD-YFGY 101
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
V +++N+TDIDDKII ARQE+
Sbjct: 102 NVKFIQNVTDIDDKIIIAARQEYL 125
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 117/449 (26%), Positives = 179/449 (39%), Gaps = 90/449 (20%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ ++ + S ++F D RL L P+ R + +IP +I ++ II +G
Sbjct: 229 NELGSTVNDPSIFRKLPSFWEKKFNDDMGRLNVLPPSITTRVSEYIPDVIEFVEKIITNG 288
Query: 144 HAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----------KNPADFI 192
AY + + FDT+ N + K+ G + KN ADF
Sbjct: 289 FAYATKDGSVYFDTAKFENDPNHDYAKLQPWNKGDMSLINDGEGSLSTGQDTKKNAADFA 348
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP W S WG GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 349 LWKGSKPGEPSWPSKWGEGRPGWHIECSVMASDITGQTMDIHSGGVDLCFPHHDNELAQS 408
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++ N ++HNG L+++G+KMSKS NFITI E L + + +RL
Sbjct: 409 EAYFDNKQWVNYFMHNGHLHIQGQKMSKSLKNFITIEEAL-------NDFTSRQLRLVFA 461
Query: 313 MTHYREPIDFTVQRLTEAEILLSKW--------------------------------PQT 340
++++ +PIDF + E + S Q
Sbjct: 462 LSYWEKPIDFKDSLIKEVKSWESSVSKFFTTVRALNNDYKHTLAEGGYVSKKLSQAERQL 521
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPI 384
+ +A ++L++ ++ + +L +S ++
Sbjct: 522 YDNLTKAQTETHAAFCDNLSSPLVLRTIQELVSKSNNYIQSCATGENELRIEVLLEISSW 581
Query: 385 FNASAHILGIE-----------VCKEHLNKNISIAI-----EKLVQERLILLK---MK-- 423
ILG E E I + L Q R + K
Sbjct: 582 IVKILKILGFETRSDKLGWLDSNGSESEGSASKEDIAMPYVKALSQFRDAIRNMAINKSS 641
Query: 424 --KF-SSADYIRKQLESKGFILEDYKNPD 449
F +++D IR L + G L+D N
Sbjct: 642 FGDFLNASDSIRSDLINLGISLDDRPNGS 670
>gi|71402719|ref|XP_804237.1| cysteinyl-tRNA synthetase [Trypanosoma cruzi strain CL Brener]
gi|70867098|gb|EAN82386.1| cysteinyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 785
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 118/445 (26%), Positives = 179/445 (40%), Gaps = 80/445 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E + + F +D RL P R T ++PQ++ IQ I+ +G
Sbjct: 223 EREGQYVTDQSIFEDHARLYERLFFEDMRRLGVRDPDVVSRVTEYVPQVVDFIQKIMDNG 282
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNP 188
AY + I FDT++ G + ++ E + V K+N
Sbjct: 283 FAYRGTSSIFFDTAAFLRAGHDYPKLKPVSERGENDATEAEMAEGEGALTVGVAGEKRNA 342
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S P EP W SPWG GRPGWHIECS M+S LG D+H GG DL FPHH+NE
Sbjct: 343 NDFALWKFSKPGEPRWPSPWGAGRPGWHIECSVMASDILGTNIDVHSGGWDLKFPHHDNE 402
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
AQS + N ++H G L+++G KMSKS NFITI + L+ V+R
Sbjct: 403 CAQSEACHMQHQWINYFLHCGHLHIKGLKMSKSLKNFITIRQALDELDV-----TPRVMR 457
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII--------------------- 347
L L H+ +P++F+ Q + EA+ S I+
Sbjct: 458 LLFLANHWGKPMNFSDQSIEEAKERERVLRAFFGSVDIVLRKDNWGKTQGLNDHDRRLQE 517
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAH 390
+ AV AL N+ +T +A+ ++ L + +
Sbjct: 518 TWLTAENAVHGALQNNFDTPAAMDSVMGLVGATNHYLLSGERPSATLVRKVGRYVTRILQ 577
Query: 391 ILGI--------EVCKEHLNKNISIAIEKLVQERLILL-KMK--K----F-SSADYIRKQ 434
+ G+ ++ + + ++ L++ R + K F D +R +
Sbjct: 578 VFGVVEGTDMVGFATQQGSDDRLLTVMDALLRFRDGVRDAAKVENSTETFLPLCDAVRDE 637
Query: 435 -LESKGFILEDYKNPDNGQRMTRWK 458
L G +ED T WK
Sbjct: 638 WLVPAGIRIEDNPAGP-----TTWK 657
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 36/82 (43%), Positives = 52/82 (63%), Gaps = 1/82 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
K +++ N+L + F + +R Y CGPTVY+ +H+G+AR + FD+L R++ Y
Sbjct: 37 KGLRVLNSLTESVEPFAPREGRLVRWYACGPTVYELSHMGHARAYLTFDILRRIMED-YF 95
Query: 63 EKCVTYVRNITDIDDKIIERAR 84
V Y NITDIDDKII+RAR
Sbjct: 96 GYQVVYQMNITDIDDKIIKRAR 117
>gi|320580808|gb|EFW95030.1| Cysteinyl-tRNA synthetase [Pichia angusta DL-1]
Length = 737
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 38/95 (40%), Positives = 54/95 (56%), Gaps = 1/95 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ +YNTL R F + Y CGPTVY+ +H+G+AR + D+ R+L+ Y
Sbjct: 15 LVLYNTLTRSKVPFVPSSSDEVTWYSCGPTVYNSSHMGHARNYVTIDINRRILQD-YFGY 73
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
V +V+N+TDIDDKII +ARQEH S +
Sbjct: 74 NVKFVQNVTDIDDKIIIKARQEHLFGEFARKHSAV 108
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 104/440 (23%), Positives = 172/440 (39%), Gaps = 85/440 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + +S ++ +D L L PT R + ++P+++ +Q II G
Sbjct: 193 KELGHTVTDPEIFKACSSFWEHKYDEDMAALNVLPPTIVTRVSEYVPEIVAFVQQIIDKG 252
Query: 144 HAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK---------NPADFIL 193
+AY ++ + F+ + + K+ G + + N +DF L
Sbjct: 253 YAYATSDGSVYFNVAKFDKDPAHEYAKLQPWSKGNLELLEDGEGSLSAAQGKLNASDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S EP W SPWG GRPGWHIECS M++ ++G DIH GG+DL FPHH+NE+AQS
Sbjct: 313 WKASKAGEPSWPSPWGPGRPGWHIECSVMAADFVGDKLDIHSGGIDLAFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
++ N ++H G L++EG+KMSKS NFITI E L + A +RL +
Sbjct: 373 AHYDCKQWVNYFLHTGHLHIEGQKMSKSLKNFITIEEALGR-------YSARQLRLCFAL 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTS------------------------------ 343
+ +DF L E S + +
Sbjct: 426 VQWNNALDFKESLLNEVRSTESSLSKFFKNVRAIKADTDHRLRAGEVISKKYGQLEKRLV 485
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNAS 388
V +A ++L+T A++AL +L + +
Sbjct: 486 AELAQCKKNVHAAFCDNLSTPQALRALLELVNSANTYIGAVGADLRVEPLVQSALYITRI 545
Query: 389 AHILGIE-------VCKEHLNKNISIAIEKLV-----------QERLILLKMKKFS---- 426
+LG + E + + E L+ R + +
Sbjct: 546 LRVLGFDTRKDGLGWEDEQADTSSGNLEEALMPYLKVLSNFRDLVRSSAIAKADYKVFLD 605
Query: 427 SADYIRK-QLESKGFILEDY 445
+ D +R +L L+D
Sbjct: 606 ATDTLRDKELLQLNVSLDDR 625
>gi|332024052|gb|EGI64270.1| Cysteinyl-tRNA synthetase, cytoplasmic [Acromyrmex echinatior]
Length = 732
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 114/452 (25%), Positives = 178/452 (39%), Gaps = 92/452 (20%)
Query: 77 DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
DKI + +I + + I+ +F KD L L P R + ++ ++I I
Sbjct: 183 DKI------KGSTITEHSIFNKISKHWEAEFHKDMDALNILKPNVLTRVSEYVEEIITFI 236
Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA------- 189
Q II +G+AYE+N + FD S K+ + G + + + +
Sbjct: 237 QQIIDNGYAYESNGSVYFDVDKFDKQEKHSYAKLVPEAYGDTSSLEEGEGDLSTTADKLS 296
Query: 190 ------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
DF LWK S EP WESPWGRGRPGWHIECS M+S G+ DIH GG+DL FP
Sbjct: 297 EKKSVTDFALWKCSKAGEPWWESPWGRGRPGWHIECSVMASAICGESLDIHTGGVDLKFP 356
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWP 303
HH+NE+AQ+ ++H+G L + G KMSKS NF+TI + L + +
Sbjct: 357 HHDNELAQAEACFNNSHWVRYFLHSGHLTIAGCKMSKSLKNFVTIQDAL-------KKYS 409
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTE----------------------------AEILLS 335
+ +RLA L+ +++ +D++ +
Sbjct: 410 SRQLRLAFLLHSWKDTLDYSDNTMNMAVQYEKFLNEFFLNIKCKIRSLGTNTTTTIDSFI 469
Query: 336 KWPQTSTSKGI----IDPAVLSALYNDLNTVSAIQALHKLARESTKN------------H 379
KW ++ AL ++++T + + + +L
Sbjct: 470 KWSNLEVKLNEKFYLAKHSIHKALCDNIDTRTVLNLIRELVTNCNVYMSQSKNPNLLLLR 529
Query: 380 DLLPIFNASAHILG----------IEVCKEHLNKNISIAI----EKLVQERLILL----- 420
D+ I G + E +N N+ + E LV R +
Sbjct: 530 DIAVYITKIFTIFGAVSSSYNSIGFPINDEIVNTNVEETVMPYVEILVNFREKVRNCAKT 589
Query: 421 -KMKK-FSSADYIRKQ-LESKGFILEDYKNPD 449
K K D +R L + G LED +
Sbjct: 590 LKAKDILQECDQLRDDILPNVGVRLEDSNEGE 621
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++YN+L R+ F + + Y CGPTVYD +H+G+AR I FD+L Y
Sbjct: 18 MVLRLYNSLTREKEIFVPQFGNRVLWYSCGPTVYDASHMGHARSYISFDIL-------YF 70
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII+RARQ +
Sbjct: 71 GYDILYVMNITDIDDKIIKRARQNYL 96
>gi|67903626|ref|XP_682069.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
gi|40741403|gb|EAA60593.1| hypothetical protein AN8800.2 [Aspergillus nidulans FGSC A4]
Length = 838
Score = 152 bits (383), Expect = 1e-34, Method: Composition-based stats.
Identities = 42/93 (45%), Positives = 58/93 (62%), Gaps = 8/93 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K+YN+L + T F IDP + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 55 PSLKVYNSLTKSKTPFIPIDPHGKKVTWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 113
Query: 61 YGEKCVTYVRNITDIDDK-----IIERARQEHP 88
Y + V +V NITD+DDK II RARQ+H
Sbjct: 114 YFKFNVHFVMNITDVDDKVNGVQIILRARQQHL 146
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 110/468 (23%), Positives = 173/468 (36%), Gaps = 113/468 (24%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + +T K ++F+KD L L P R T + ++ ++ I+ + Y
Sbjct: 271 IDADDHSIFTKLTRKYEERFMKDMDDLNVLRPDELTRVTEYGQEIADFVEKIVENKFGYV 330
Query: 148 A-NNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ + + FD ++ G K+ + G+ + K++ +DF LWK S
Sbjct: 331 SADGSVYFDINAFEAAGFPYARLEPWSRSDNKLLAEGEGSLANKTTEKRSKSDFALWKSS 390
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 391 KPGEPSWSSSWGRGRPGWHIECSAMASARLGKHMDIHSGGIDLAFPHHDNELAQSEAYWH 450
Query: 258 IE--KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ N ++H G L+++G KMSKS NF TI E LE + W +R+ L+
Sbjct: 451 SHGDQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGG 505
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTS---------------------KGIIDPAVLSA 354
+++ I+ T + ++ K AV
Sbjct: 506 WKDGIEITDELVSAGNSWEDKLNNFFIRVKDPAARQGPASSTDTTLAEALEAAKSAVHEQ 565
Query: 355 LYNDLNTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKN 404
L + NT + ++ +L + + ++LG+ ++
Sbjct: 566 LCDSFNTPGMMNSISELITKYNIADKSTLNPKDVEAVARWVTYMVNVLGLNGQTPADSRE 625
Query: 405 -----ISIAIEK------LVQERLILLK---MK--------------------------- 423
I + E L R L + K
Sbjct: 626 IGWSGIDVPEEAKPFLYPLSAMRDALRQSARAKTLNAGEISKIVEQEAIPEATTEKTKPY 685
Query: 424 -----KF------------------SSADYIRK-QLESKGFILEDYKN 447
F + D +R L G LED +N
Sbjct: 686 ATVVSNFRTKVSSLQDSGDLGKEVLALCDRLRDVDLFDLGVYLEDREN 733
>gi|240277739|gb|EER41247.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 783
Score = 152 bits (383), Expect = 2e-34, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 3/114 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
Y + V ++ NITD+DDKII R RQ H ++ II + T+
Sbjct: 83 YFKFDVEFIMNITDVDDKIITRGRQHHFFTEFVNSHPIIDDEVTKIVRSAFAAF 136
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 89/295 (30%), Positives = 142/295 (48%), Gaps = 20/295 (6%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T K +F++D L L P R T ++P+++ ++ I+ H Y ++ + F
Sbjct: 240 FTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYF 299
Query: 155 DTSSIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ K+ + G + K++ ADF LWK S EP W
Sbjct: 300 DITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWP 359
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LG+ DIH GG+DL FPHH+NE+AQS +
Sbjct: 360 SPWGDGRPGWHIECSAMASAKLGEQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHW 419
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L++ +++ I+
Sbjct: 420 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLSAWKDGIE 474
Query: 322 FTVQRLTEAEILLSKWPQTSTSK-GIIDPAVLSALYNDLNTVSAIQALHKLARES 375
T + K ++ ++ D A+++ +S
Sbjct: 475 ITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPGSADNTLAVALKSAQDAVHQS 529
>gi|326436995|gb|EGD82565.1| cysteinyl-tRNA synthetase [Salpingoeca sp. ATCC 50818]
Length = 708
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++N+ R+ F + + + Y CGPTVYD +H+G+AR I FD++ R+LR Y
Sbjct: 7 PQLQLFNSYTRQKEVFVPRERNRVTWYGCGPTVYDASHMGHARAYITFDIMRRVLRD-YF 65
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITD+DDKII RARQ H
Sbjct: 66 KYDCEYVMNITDLDDKIILRARQNHL 91
Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats.
Identities = 112/440 (25%), Positives = 176/440 (40%), Gaps = 78/440 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+++ ++ + S ++ K +F +D L AP R T +P++ +Q II +G
Sbjct: 174 KRKGSTVSDHSIFSSVSRKWEAEFHRDMNALNVEAPDVLKRVTECVPEIAAFVQRIIDNG 233
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY----------HKKNPADFIL 193
+ YEAN + FD ++ + K+ + + K++ +DF L
Sbjct: 234 YGYEANGSVYFDVAAFRGSSEHNYPKLLPEAAANAKALEEGEGALSSGAGDKRSQSDFAL 293
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W SPWG+GRPGWHIECS M+S L DIH GG+DL FPHH+NE AQS
Sbjct: 294 WKASKPGEPAWPSPWGQGRPGWHIECSVMASSVLNDNMDIHSGGVDLKFPHHDNECAQSE 353
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+K N +IH+G L++EG KMSKS NFITI E L+ + A IRL L+
Sbjct: 354 AYYGNDKWVNYFIHSGHLHIEGHKMSKSLKNFITIKEALD-------QYTARQIRLMFLL 406
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS--------------------------TSKGII 347
+++ +D++ + A + +
Sbjct: 407 HNWKATLDYSSHSMMTAISYEKMFNEFFLNVSSALYGADPFSFFKPDAEDRAILQQFKAT 466
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASAHI 391
+ +AL + ++T +Q +L F +
Sbjct: 467 KQHIHNALCDSIDTPLVMQLSKQLITAVNVYIKEKEAAGSAPQAALLRQIGRYFTELLAL 526
Query: 392 LGIEVCKEHLN--------KNISIAIEKLVQ-------ERLILLKMKK---FSSADYIRK 433
G+ E + + +L+ R L K D IR
Sbjct: 527 FGVVETPEEIGFHAAGAQGSMEDAVLPQLLAFAHTREAVRQTALTKKDKAVLKMCDEIRD 586
Query: 434 -QLESKGFILEDYKNPDNGQ 452
+L + G LED + +
Sbjct: 587 DELPNVGVRLEDKEQGPVVK 606
>gi|297721797|ref|NP_001173262.1| Os03g0143300 [Oryza sativa Japonica Group]
gi|255674196|dbj|BAH91990.1| Os03g0143300 [Oryza sativa Japonica Group]
Length = 98
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 37/76 (48%), Positives = 53/76 (69%), Gaps = 2/76 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+++++N++ +K F+ + +RMYVCG T YDF+HIG+AR + FDVLYR L++
Sbjct: 9 PQLELFNSMTKKKELFEPLVEGKVRMYVCGVTPYDFSHIGHARAYVAFDVLYRYLKFLGY 68
Query: 63 EKCVTYVRNITDIDDK 78
E V YVRN TDIDDK
Sbjct: 69 E--VEYVRNFTDIDDK 82
>gi|146080697|ref|XP_001464062.1| cysteinyl-tRNA synthetase [Leishmania infantum JPCM5]
Length = 784
Score = 151 bits (382), Expect = 2e-34, Method: Composition-based stats.
Identities = 125/447 (27%), Positives = 179/447 (40%), Gaps = 85/447 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ S+ K + F +D RL P R T ++PQ++ +Q II +G
Sbjct: 220 ERSGHSVSDQQIFEDHARKYERAFFEDMQRLGIREPDIVTRVTEYVPQVVEFVQKIIDNG 279
Query: 144 HAYEANNEIIFDTSSIPNYGSFSR------------RKIDEQKMGTRVPEKYHKKNPADF 191
AY + FDT + G ++ E + + K++P DF
Sbjct: 280 FAYVGETSVFFDTEAYIRAGHDYPKLKPGGDRNTTEDEMAEGEGVLSKGIEGEKRSPNDF 339
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE AQ
Sbjct: 340 ALWKFSKPGEPRWPSPWGEGRPGWHIECSVMASDILGENMDIHSGGWDLKFPHHDNECAQ 399
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S + + N ++H G L+++G KMSKS NFITI + L+ A +RL
Sbjct: 400 SEACNLHSQWVNYFLHCGHLHIKGLKMSKSLKNFITIRQALDEL-----GVTARTMRLLF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------------------ 347
L + +P++F+ Q L EA+ S I+
Sbjct: 455 LANPWNKPMNFSDQSLDEAKEKERVLRAFFGSVDIVLRTDNWKATQGANKHDRELLSKWV 514
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAHILG 393
+ AV +AL ++ +TV A+Q L L + + + I G
Sbjct: 515 EAEAAVHAALQDNFDTVVALQQLMSLVAATNQYLLSGERPSATLVRKVGCYVTKMFRIFG 574
Query: 394 -------IEVCKEHLNKNISIAIE---KLVQERLILL-KMKKFSS-----------ADYI 431
+ + K+ + IE LV+ R + K A
Sbjct: 575 VVEGSDDVGLQKQGSGDGEARFIEVVNTLVRFRDEVRDAAKDHKVGGGLPALVRQGA--- 631
Query: 432 RKQLESKGFILEDYKNPDNGQRMTRWK 458
R+ L G LED T WK
Sbjct: 632 REWLVDAGVRLEDNPAGP-----TTWK 653
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 1/90 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+ N+L + +F D +R Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 38 LKVMNSLTETLEDFAPRDGRVVRWYTCGPTVYDLSHMGHARAYLTFDIIRRVMED-YFGY 96
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPIND 94
V Y NITDIDDKII+RAR +
Sbjct: 97 SVIYQMNITDIDDKIIKRARVNKLLDDFKE 126
>gi|76154769|gb|AAX26189.2| SJCHGC03758 protein [Schistosoma japonicum]
Length = 230
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 43/86 (50%), Positives = 55/86 (63%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L + F D ++ Y CGPTVYD +H+G+AR IVFDV+ R+L Y
Sbjct: 59 PNVYLYNSLTLRKDLFVPQDERCVKWYTCGPTVYDVSHMGHARTYIVFDVIRRVLMD-YF 117
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V YV NITDIDDKII+RARQ H
Sbjct: 118 NFKVIYVLNITDIDDKIIKRARQNHL 143
>gi|299751746|ref|XP_002911681.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|298409516|gb|EFI28187.1| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 801
Score = 151 bits (381), Expect = 2e-34, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 3/85 (3%)
Query: 5 IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +YN+L + T F +DP + Y CGPTVYD H+G+AR + DVL R++R Y
Sbjct: 24 LVLYNSLTKTKTPFIPVDPSGRKVTWYCCGPTVYDAGHLGHARNYLTTDVLRRIMRD-YF 82
Query: 63 EKCVTYVRNITDIDDKIIERARQEH 87
V +V+N+TD+DDKII+RAR++H
Sbjct: 83 GYEVEFVQNVTDVDDKIIKRAREQH 107
Score = 112 bits (280), Expect = 1e-22, Method: Composition-based stats.
Identities = 115/479 (24%), Positives = 169/479 (35%), Gaps = 115/479 (24%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ S + + + F +D L L PT R + IP+ I +Q II +G
Sbjct: 218 KKSEISPDQHAIFADYAAYWENHFNEDLRTLNILPPTVTTRVSEFIPENIAFVQQIIDNG 277
Query: 144 HAYEANN-EIIFDTSSIPNYGS-----------------------FSRRKIDEQKMGTRV 179
AY + FD + G + +
Sbjct: 278 FAYAIPGGTVYFDVDAFERAGHYYAKLEPGNRKGEAKQEEDTPAVEAPTNVATTSEAEIQ 337
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
EK K++P DF LWK+S EPGWESPWG GRPGWHIECSAM+S LG FDIH GG+D
Sbjct: 338 NEKAQKRSPRDFALWKKSRVGEPGWESPWGYGRPGWHIECSAMASQVLGAQFDIHSGGID 397
Query: 240 LIFPHHENEIAQSCCADRIEK--------TANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
L FPHH+NE+AQS N +IH G L++ G KMSKS NFI+I +
Sbjct: 398 LAFPHHDNELAQSEAYWHKNPKESRGPVQWVNYFIHMGHLSIAGSKMSKSLKNFISIRDA 457
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---------------------- 329
L + + R +R+ +M ++ ++ + E
Sbjct: 458 LASGDWTARK-----LRILFMMGGWKGGLEISQNFRAEVDLWEKTVTNFFSNVEALTRES 512
Query: 330 --------AEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--- 378
+ S+ Q T + AL + NT SA+ + L ++
Sbjct: 513 ETSGGPRPRHLFRSQEKQLFTDLETAQKDLHVALCDSFNTGSALSTILDLISKTNTYLKE 572
Query: 379 -----------------HDLLPIFNASAHILGIEVCKEHLNKNISI-------------- 407
++ I G+ + +
Sbjct: 573 NQKSASNPDAYFSLTAVREVARWVTKMLRIFGLSTSADLIGWGTDAPAGPDGAQNKEAVA 632
Query: 408 --AIEKLVQERLI----LLKMK-------KFSSADYIRK-QLESKGFILEDYKNPDNGQ 452
++ L + R L K D +R QL G LED +
Sbjct: 633 LPYVQALSRFRDQVKSLALVNKTIPVCQELLQLCDSLRDDQLLHLGVSLEDRDSSIGEP 691
>gi|110757574|ref|XP_394641.3| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like [Apis
mellifera]
Length = 729
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 42/118 (35%), Positives = 60/118 (50%), Gaps = 12/118 (10%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+K+YN+L R F ++I Y CGPTVYD +H+G+AR + FD++ R+L Y
Sbjct: 20 LKLYNSLTRNKEIFVPQFGNHILWYSCGPTVYDASHMGHARSYMSFDIIRRVLSD-YFGY 78
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YV NITDIDDKII+RARQ + + K ++ L
Sbjct: 79 DILYVMNITDIDDKIIKRARQNY-----------LYEKYIKENHTLDKILDDAKNVMY 125
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 119/439 (27%), Positives = 176/439 (40%), Gaps = 82/439 (18%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+++ + + + ++ Q+F KD L L P R + +IP++I I+ II +G
Sbjct: 190 KEKGAMVTEHSIFTKLSQYWEQEFHKDMDSLNVLRPNVLTRVSEYIPEIIEFIKKIIENG 249
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKI-----------DEQKMGTRVPEKYHKKNPADFI 192
AYE+N + FD S+ K+ E + E K++P DF
Sbjct: 250 IAYESNGSVYFDVSTFNKQDKHYYAKLVPEAYGDTLSLQEGEGDLSTLEISEKRSPIDFA 309
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S EP WESPWG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NEIAQ+
Sbjct: 310 LWKCSKEGEPWWESPWGKGRPGWHIECSVMASIICGESLDIHTGGVDLKFPHHDNEIAQA 369
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
++H+G L + G KMSKS NFITI + L + + A +RLA L
Sbjct: 370 EAYFNNSNWVRYFLHSGHLTISGCKMSKSLKNFITIQDAL-------KKYSARQLRLAFL 422
Query: 313 MTHYREPIDFTVQRLTE--------------------------AEILLSKWPQTSTSKGI 346
+ +++ +D++ + KW
Sbjct: 423 LHSWKDTLDYSDNTMHMAIQYEKFLNEFFLNVKCKIRSLGSETNINTFIKWTNFEIELNE 482
Query: 347 ----IDPAVLSALYNDLNTVSAIQALHKLARESTKN------------HDLLPIFNASAH 390
V +AL ++++T SA+ A+ L D+
Sbjct: 483 KFYNARDFVHNALCDNIDTRSALDAIRDLVTHCNIYMKEIKQPNTLLLRDVAVYITKMFT 542
Query: 391 ILG-IEVCKEHLNKNISIAI-------------EKLVQERLILLK-MK------KFSSAD 429
I G I + + I I E L R + K D
Sbjct: 543 IFGTISYSHDAIGFPIDSNIVKLNVEQAVMPYLEILANFREKVRNHAKTLKASTILEECD 602
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L + G LED N
Sbjct: 603 TLRDDILPNIGVRLEDSNN 621
>gi|168071075|ref|XP_001787045.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162659850|gb|EDQ48141.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 315
Score = 151 bits (381), Expect = 3e-34, Method: Composition-based stats.
Identities = 76/256 (29%), Positives = 119/256 (46%), Gaps = 42/256 (16%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
M YLG DIH GG DL FPHHENEIAQS + AN W+HNG++N++ KMSKS
Sbjct: 1 MVRKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFANYWMHNGYINIDNEKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNFIT+N+++ + V+R ML HYR PI+++ + L L + +
Sbjct: 60 LGNFITVNDII-------KIHDPQVLRFFMLSVHYRNPINYSEEVLENTRAGLERIRTSY 112
Query: 342 TSK---------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
+ + + ++ +D NT + I L +L++++
Sbjct: 113 ENLKHRSTASTDLTDTNDEWIAKIADLRKQFVESMDDDFNTANGISVLFELSKQANYYLL 172
Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
H + F +LG+ + + + I L+++R K + F+ AD
Sbjct: 173 EKTTSPAVIHAFMKEFEELFAVLGLSLSSDEELLDEEIE--ALIEKRTQARKDRDFALAD 230
Query: 430 YIRKQLESKGFILEDY 445
IR QL++ ILED
Sbjct: 231 QIRDQLKAMNIILEDT 246
>gi|238504958|ref|XP_002383708.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
gi|220689822|gb|EED46172.1| cysteinyl-tRNA synthetase [Aspergillus flavus NRRL3357]
Length = 874
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 55/88 (62%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R F ID + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 92 PPLKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 150
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII R RQ+H
Sbjct: 151 YFKFDVNFVMNITDVDDKIILRGRQQHL 178
Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats.
Identities = 109/474 (22%), Positives = 167/474 (35%), Gaps = 118/474 (24%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T + ++F+KD L L P R T + ++ ++ I+ + Y + + F
Sbjct: 310 FTKLTKRYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYF 369
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D + G K+ + G+ + K++ +DF LWK S P EP W
Sbjct: 370 DIEAFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWA 429
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-------RI 258
S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 430 SSWGRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHD 489
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
E+ N + H G L+++G KMSKS NF TI E LE + W +R+ L+ +++
Sbjct: 490 EQWVNYFFHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGGWKD 544
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTS-------------------KGIIDPAVLSALYNDL 359
++ T ++ K AV L +
Sbjct: 545 GVEITDDLVSAGSSWEEKVNNFFIKVKDPAALQGSGTDDTLATALADAQKAVYEHLCDSF 604
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI---- 405
NT A+ A+ +L + + + +I G+ ++ I
Sbjct: 605 NTPGAMYAISELITKYNSADKSAVNPKDVEAVARWVTSMVNIFGLNGKAAADSQEIGWSG 664
Query: 406 ---SIAIEKLV--------QERLILLK-----MK-------------------------- 423
+ + R K
Sbjct: 665 IDVPEEAKPFLHPLSSMRDSLRQAARAKEGVNAKTIAEIVDREALPEQEVTDSTKPYADV 724
Query: 424 --KF------------------SSADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
F + D +R L G LED N R
Sbjct: 725 LSNFRNKLSSLEESNNISKEVLALCDRVRDIDLFEVGVYLEDRDNLPALVRPVT 778
>gi|238878314|gb|EEQ41952.1| cysteinyl-tRNA synthetase [Candida albicans WO-1]
Length = 781
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 115/448 (25%), Positives = 186/448 (41%), Gaps = 88/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +++ +D RL L P+ R + ++P +I + I+ +G
Sbjct: 230 KEFGATVTDPQVFRKLPSYWEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNG 289
Query: 144 HAYE-ANNEIIFDT----SSIPNYGSFSRRKIDEQKMGTR----VPEKYHKKNPADFILW 194
+AY+ + + FDT S +Y + + + K+N +DF LW
Sbjct: 290 YAYKTDDGSVYFDTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALW 349
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W+S WG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 350 KASKPGEPAWDSKWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEA 409
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++HNG L+++G+KMSKS NFITI+E L + A +RL +
Sbjct: 410 YFDNKQWVNYFMHNGHLHIQGQKMSKSLKNFITIDEAL-------NDFSARQLRLVFALN 462
Query: 315 HYREPIDFTVQRLTEAEILLSKW--------------------------------PQTST 342
+ +P+DF ++E + + S + Q
Sbjct: 463 AWEKPLDFKDSLISEVKSIESTFSKFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFN 522
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
V +A ++L++ AI+ L L +S L
Sbjct: 523 DLEQAQDEVDAAFNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIV 582
Query: 387 ASAHILGIEVCKEHLNKNISIA----------------IEKLVQERLILLK---MK---- 423
ILG E + L ++ L Q R + K
Sbjct: 583 KILEILGFEARSDRLGWIDESEQTSVNGSSTEDVALPYVKALAQFRDSVRSLAINKAELN 642
Query: 424 KF-SSADYIRKQLESKGFILEDYKNPDN 450
+F ++D IR L G L+D + +
Sbjct: 643 EFLKASDAIRSSLIGLGVSLDDRPDGTS 670
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +KIYN+L R EF P +I Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 43 KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQD-Y 101
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ +V+N+TDIDDKII ARQ++
Sbjct: 102 FGYNIKFVQNVTDIDDKIIIAARQQYL 128
>gi|25808902|gb|AAN73943.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ H+ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|241950257|ref|XP_002417851.1| cysteine-tRNA ligase, putative; cysteinyl-tRNA synthetase, putative
[Candida dubliniensis CD36]
gi|223641189|emb|CAX45566.1| cysteine-tRNA ligase, putative [Candida dubliniensis CD36]
Length = 780
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 113/448 (25%), Positives = 187/448 (41%), Gaps = 88/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +++ +D RL L P+ R + ++P +I + I+ +G
Sbjct: 229 KEFGATVTDPQIFRKLPSYWEKRYNEDMARLNVLPPSITTRVSEYMPDIIEFVDKIVSNG 288
Query: 144 HAYE-ANNEIIFDT----SSIPNYGSFSRRKIDEQKMGTR----VPEKYHKKNPADFILW 194
+AY+ + + FDT S +Y + + + K+N +DF LW
Sbjct: 289 YAYKTDDGSVYFDTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALW 348
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W+S WG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 349 KASKPGEPAWDSKWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEA 408
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++HNG L+++G+KMSKS NFITI+E L + A +RL +
Sbjct: 409 YFDNKQWVNYFMHNGHLHIQGQKMSKSLKNFITIDEAL-------NDFSARQLRLVFALN 461
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA-------------------- 354
+ +P+DF ++E + + S + + T+ ++
Sbjct: 462 AWEKPLDFKDSLISEVKSIESTFSKFFTNVRALNSDYKHKIENGGYVSRKITGIEKQLFN 521
Query: 355 ------------LYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
++L++ AI+ L L +S L
Sbjct: 522 DLECAQDEVDVAFNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIV 581
Query: 387 ASAHILGIEVCKEHLNKNISIA----------------IEKLVQERLILLK---MK---- 423
ILG E + L ++ L Q R + K
Sbjct: 582 KILEILGFEARSDRLGWIDESEQTSTNGTSTEDAALPYVKALAQFRDSVRSLAINKAELN 641
Query: 424 KF-SSADYIRKQLESKGFILEDYKNPDN 450
+F ++D IR L G L+D + +
Sbjct: 642 EFLKASDAIRASLIGLGVSLDDKPDGTS 669
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 39/87 (44%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++IYN+L R EF P +I Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 42 KPTLRIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQD-Y 100
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ +V+N+TDIDDKII ARQ++
Sbjct: 101 FGYNIKFVQNVTDIDDKIIIAARQQYL 127
>gi|68467189|ref|XP_722256.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
gi|68467418|ref|XP_722142.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
gi|46444091|gb|EAL03368.1| hypothetical protein CaO19.4931 [Candida albicans SC5314]
gi|46444215|gb|EAL03491.1| hypothetical protein CaO19.12397 [Candida albicans SC5314]
Length = 781
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 115/448 (25%), Positives = 186/448 (41%), Gaps = 88/448 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ ++ + S +++ +D RL L P+ R + ++P +I + I+ +G
Sbjct: 230 KEFGATVTDPQVFRKLPSYWEKRYNEDMARLNVLPPSVTTRVSEYMPDIIEFVDKIVTNG 289
Query: 144 HAYE-ANNEIIFDT----SSIPNYGSFSRRKIDEQKMGTR----VPEKYHKKNPADFILW 194
+AY+ + + FDT S +Y + + + K+N +DF LW
Sbjct: 290 YAYKTDDGSVYFDTVKYEHSQHDYAKLQPWSKGDMSLINDGEGSLSVSNTKRNASDFALW 349
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W+S WG+GRPGWHIECS M+S G+ DIH GG+DL FPHH+NE+AQS
Sbjct: 350 KASKPGEPAWDSKWGKGRPGWHIECSVMASDITGENMDIHSGGIDLCFPHHDNELAQSEA 409
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++HNG L+++G+KMSKS NFITI+E L + A +RL +
Sbjct: 410 YFDNKQWVNYFMHNGHLHIQGQKMSKSLKNFITIDEAL-------NDFSARQLRLVFALN 462
Query: 315 HYREPIDFTVQRLTEAEILLSKW--------------------------------PQTST 342
+ +P+DF ++E + + S + Q
Sbjct: 463 AWEKPLDFKDSLISEVKSIESTFSKFFTNVRALNSDYKHKTENGGYVSRKITDIEKQLFN 522
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FN 386
V +A ++L++ AI+ L L +S L
Sbjct: 523 DLEQAQDEVDAAFNDNLSSGQAIRVLQDLISKSNNYIQLTSTGQTELRIEVLIQVTNWIV 582
Query: 387 ASAHILGIEVCKEHLNKNISIA----------------IEKLVQERLILLK---MK---- 423
ILG E + L ++ L Q R + K
Sbjct: 583 KILEILGFEARSDRLGWIDESEQTSVNGSSTEDVALPYVKALAQFRDSVRSLAINKAELN 642
Query: 424 KF-SSADYIRKQLESKGFILEDYKNPDN 450
+F ++D IR L G L+D + +
Sbjct: 643 EFLKASDAIRSSLIGLGVSLDDRPDGTS 670
Score = 149 bits (376), Expect = 1e-33, Method: Composition-based stats.
Identities = 40/87 (45%), Positives = 56/87 (64%), Gaps = 1/87 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K +KIYN+L R EF P +I Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 43 KPTLKIYNSLTRSKNEFYPNKPGHITWYSCGPTVYDHSHMGHARNYVSTDICRRILQD-Y 101
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ +V+N+TDIDDKII ARQ++
Sbjct: 102 FGYNIKFVQNVTDIDDKIIIAARQQYL 128
>gi|255949146|ref|XP_002565340.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211592357|emb|CAP98704.1| Pc22g14160 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 800
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 57/88 (64%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L + T F ID + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 21 PPLKVWNSLTKSKTPFVPIDSAGKKVVWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 79
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V +V NITD+DDKII RARQ+H
Sbjct: 80 YFKFDVNFVMNITDVDDKIILRARQQHL 107
Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats.
Identities = 107/478 (22%), Positives = 169/478 (35%), Gaps = 114/478 (23%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T + ++F KD L L PT R T + ++ + I+ + Y
Sbjct: 234 VDADDHSIFTKLTKRYEERFTKDMRDLNVLDPTELTRVTEYGDEIAAFVDRIVKNNFGYA 293
Query: 147 EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ + FD ++ G K+ + G+ + K+ +DF LWK S
Sbjct: 294 TKDGSVYFDINAFEAAGHPYARLEPWSRSDNKLAAEGEGSLASKTTEKRGASDFALWKSS 353
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA-- 255
P EP W S WG+GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 354 KPGEPSWSSAWGKGRPGWHIECSAMASARLGNQMDIHSGGIDLAFPHHDNELAQSEAYWH 413
Query: 256 --DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ E+ N ++H G L+++G KMSKS NF TI E L+ + W +R+ L+
Sbjct: 414 GDHKHEQWVNYFLHMGHLSIQGSKMSKSLKNFTTIREALDR-----KDWSPRSLRIVFLL 468
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS-------------------TSKGIIDPAVLSA 354
+++ ++ T + K AV
Sbjct: 469 GGWKDGVEITDDLVNTGSSWEEKVNNFFLKVKDPAALQSSGTDTTFAADLETAKKAVHDQ 528
Query: 355 LYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHILGIEVCKEHLNKN 404
L + NT + + ++ +L + + ++ G+ +
Sbjct: 529 LCDSFNTPAVMASISELISKFNIADKAAVPSQDVQAAAQWVTSMVNMFGLNGTASADSTE 588
Query: 405 -----ISIAIEK------LVQERLILLK---------MKK-------------------- 424
I I E L R L + K
Sbjct: 589 IGWSGIDIPEEAKPYLYPLSAMRDTLREAARSKAGISAKDIEAAVAQASAPQEASESAKP 648
Query: 425 FSS-------------------------ADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
++ D +R L G LED +N R
Sbjct: 649 YAELFSNFRNKVVSLESSDSIGKDILSLCDRVRDIDLFDVGIALEDRENQPALVRPVT 706
>gi|25808850|gb|AAN73917.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|221118260|ref|XP_002160433.1| PREDICTED: similar to cysteinyl-tRNA synthetase, partial [Hydra
magnipapillata]
Length = 170
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 1/94 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K ++ +YN+L R+ F + + Y CGPTVYD +H+G+AR I FD+L R++ Y
Sbjct: 40 KSQLHLYNSLTRETNLFVPQSGNKVTWYSCGPTVYDASHMGHARSYITFDILRRVMSD-Y 98
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDA 95
+ YV NITD+DDKII RAR+ H ++
Sbjct: 99 FNFDIFYVMNITDVDDKIINRARRNHLMKQFRES 132
>gi|317155055|ref|XP_003190552.1| cysteinyl-tRNA synthetase [Aspergillus oryzae RIB40]
Length = 806
Score = 151 bits (380), Expect = 3e-34, Method: Composition-based stats.
Identities = 40/100 (40%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R F ID + Y CGPTVYD AH+G+AR + D++ R++R
Sbjct: 24 PPLKVWNSLTRSKNPFIPIDKEGKKVSWYACGPTVYDDAHLGHARNYVSTDIIRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
Y + V +V NITD+DDKII R RQ+H I
Sbjct: 83 YFKFDVNFVMNITDVDDKIILRGRQQHLFTEFTSEHPTIA 122
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T + ++F+KD L L P R T + ++ ++ I+ + Y + + F
Sbjct: 242 FTKLTKRYEERFLKDMRDLNVLDPNEITRVTEYGAEIADFVEKIVKNNFGYVTDDGSVYF 301
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D + G K+ + G+ + K++ +DF LWK S P EP W
Sbjct: 302 DIEAFEAAGHPYARLEPWNRSDSKLLAEGEGSLTKKATDKRSASDFALWKASKPGEPSWA 361
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-------RI 258
S WGRGRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 362 SSWGRGRPGWHIECSAMASARLGKQLDIHSGGVDLAFPHHDNELAQSEAYWADSHNHSHD 421
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
E+ N + H G L+++G KMSKS NF TI E LE + W +R+ L+ +++
Sbjct: 422 EQWVNYFFHMGHLSIQGSKMSKSLKNFTTIREALER-----KEWTPRSLRIVFLLGGWKD 476
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------DPAVLSALYNDL 359
++ T ++ K AV L +
Sbjct: 477 GVEITDDLVSAGSSWEEKVNNFFIKVKDPAALQGSGTDDTLATALADGQKAVYEHLCDSF 536
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + +I G+ ++ I
Sbjct: 537 NTPGAMYAISELITKYNSADKSAVNPKDVEAVARWVTSMVNIFGLNGKAAADSQEI 592
>gi|310799373|gb|EFQ34266.1| tRNA synthetase class I catalytic domain-containing protein
[Glomerella graminicola M1.001]
Length = 804
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 57/87 (65%), Gaps = 3/87 (3%)
Query: 1 MKKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M+ +K++N+L+ + F I P + Y CGPTVYD +H+G+AR + D++ R++ +
Sbjct: 1 MES-LKLHNSLKPGQPVPFTPIKPGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMH 59
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQE 86
Y V +V NITD+DDKII +AR++
Sbjct: 60 -YFGADVKFVMNITDVDDKIIIKARRQ 85
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 103/374 (27%), Positives = 157/374 (41%), Gaps = 61/374 (16%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T ++F D L CL P R T ++PQ+ + I+ G
Sbjct: 196 KETIDTSDQTIFTDLTQSMEREFFDDMDALNCLRPDVITRVTEYVPQIAEFVARIVDKGF 255
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYE++ + FD ++ G+ + + + E G K+N DF LWK
Sbjct: 256 AYESDGSVYFDITAFEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRNEGDFALWK 315
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W+S WG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 316 KSKKGEPYWDSRWGQGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAY 375
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI + L T ++ + +R+
Sbjct: 376 YVDNSKGEHTWVNNFLHMGHLSISGSKMSKSLKNFQTIQDALAT------TYTSRGMRIV 429
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
LM + + ++ + +A + T+
Sbjct: 430 FLMGKWNDGVEISPDMRAQASSWEATINNFFTNVKALVADVSASTAGVESLSISEKPSGS 489
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASA---- 389
+ +AL N +T A++ + +L E+ K LP A A
Sbjct: 490 LVSELEKAKNDLHTALTNSFDTPQAMRVIQELVSEANKVVVSQEAEANLPALVAVARWIT 549
Query: 390 HILGIEVCKEHLNK 403
ILG E+
Sbjct: 550 KILGTFGLDENATA 563
>gi|25808838|gb|AAN73911.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (379), Expect = 4e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808852|gb|AAN73918.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (378), Expect = 5e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808936|gb|AAN73960.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808858|gb|AAN73921.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808814|gb|AAN73899.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808886|gb|AAN73935.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 150 bits (378), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808846|gb|AAN73915.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808900|gb|AAN73942.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808932|gb|AAN73958.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIKTLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808894|gb|AAN73939.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNMKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808924|gb|AAN73954.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 6e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S +R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808954|gb|AAN73969.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|254584650|ref|XP_002497893.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
gi|186703720|emb|CAQ43411.1| Cysteinyl-tRNA synthetase [Zygosaccharomyces rouxii]
gi|238940786|emb|CAR28960.1| ZYRO0F15928p [Zygosaccharomyces rouxii]
Length = 746
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 48/209 (22%), Positives = 81/209 (38%), Gaps = 11/209 (5%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
K+ +K+YN+L R F I + Y CGPTVYD AH+G+AR + D+ RLL+
Sbjct: 32 KRVLKLYNSLTRNKEVFVPISGGKSVSWYSCGPTVYDAAHMGHARNYVSIDINRRLLQD- 90
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPIN--DAISIITS-------KNTQQFVKDT 111
Y V +V+N+TDIDDKII R RQ + + + I + T++ +
Sbjct: 91 YFGYDVKFVQNVTDIDDKIILRGRQNYLFEQLRLTKSRDEILEEVKLASLEYTKKNLPSY 150
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
+ + + + + A ++
Sbjct: 151 QHEGLGEFEKWYAVQDAEKEKLSNAKFPMHVNAVRSALESKNYEGDEFYEKVKDVMMPYL 210
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+ G+ V ++ + + F K M
Sbjct: 211 DGISGSSVNDREVFRKLSAFWEEKYDDDM 239
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 107/431 (24%), Positives = 177/431 (41%), Gaps = 79/431 (18%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S+ + +++ +++ D L LAP R + ++P+++ ++ I+ +G+ Y
Sbjct: 215 GSSVNDREVFRKLSAFWEEKYDDDMRLLNVLAPDVTTRVSEYVPEIVEFVKRIVDNGYGY 274
Query: 147 -EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----------KNPADFILWK 195
+ + FDT+ + K G + ++ +DF LWK
Sbjct: 275 ATEDGSVYFDTTKFDRDEKHAYAKNQPWNKGDLELVSEGEGSLVGSTSGKRSSSDFALWK 334
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
S EP WESPWG GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 335 ASKDGEPRWESPWGEGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNEMAQSEAC 394
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ N ++H G L++EG+KMSKS NFIT+ E L + + + +RLA +T
Sbjct: 395 FDNYQWVNYFLHTGHLHIEGQKMSKSLKNFITVQESL-------KMYSSRQLRLAFCLTQ 447
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------KGIIDP 349
+ +DF + E + S + T+
Sbjct: 448 WNNQMDFKESLMQEVRGMESLFGNFFTNVRALQHDIGAGASKKLGALERELLAGLDDSKD 507
Query: 350 AVLSALYNDLNTVSAIQALHKLARESTKNHDLL----------PIFNASAHILGI----- 394
V A ++L+T +A+++L +L +S + ILGI
Sbjct: 508 RVDEAFCDNLSTPTAMKSLAELVSQSNIYISKAGTEVRIEPLVDVVKFVTRILGIVGVPV 567
Query: 395 ---EVCKEHLNKNISIAIEKLV------------QERLILLKM---KKF-SSADYIRK-Q 434
E ++E+L + R + + K++ D +R
Sbjct: 568 RADGFGWESGESRGGGSVEELALPYVKCLSKFRDEVRSMAIDNADKKEYLGLTDRVRDHD 627
Query: 435 LESKGFILEDY 445
L ++D
Sbjct: 628 LLELNVAVDDR 638
>gi|25808892|gb|AAN73938.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S +R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808944|gb|AAN73964.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808910|gb|AAN73947.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|30961751|gb|AAP39992.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
Length = 219
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 17/224 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
+M DIH GG+DL+FPHHENE Q+ CA +E
Sbjct: 171 SMVFKTLALANTPYQIDIHAGGVDLLFPHHENEACQTRCAFGVE 214
>gi|25808854|gb|AAN73919.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808834|gb|AAN73909.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|195995945|ref|XP_002107841.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
gi|190588617|gb|EDV28639.1| hypothetical protein TRIADDRAFT_51757 [Trichoplax adhaerens]
Length = 764
Score = 149 bits (377), Expect = 7e-34, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 58/90 (64%), Gaps = 3/90 (3%)
Query: 1 MKKK--IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
M ++ +K+YN++ R+ F + S + Y CGPTVYD +H+G+AR + FD++ R+L
Sbjct: 1 MNQEAQLKLYNSMTRRKDTFVPSNESCLSWYNCGPTVYDASHMGHARSYVSFDIIRRVLT 60
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y ++Y NITDIDDKII RAR+ +
Sbjct: 61 -SYFNYNISYAMNITDIDDKIIFRARRNYL 89
Score = 80.1 bits (196), Expect = 8e-13, Method: Composition-based stats.
Identities = 63/208 (30%), Positives = 87/208 (41%), Gaps = 27/208 (12%)
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF LWK S P EP W+SPWG+GRPGWHIECS M+S LGK DIH GG+DL FPH
Sbjct: 366 KRSPNDFALWKCSKPGEPFWDSPWGKGRPGWHIECSVMASAILGKSLDIHSGGVDLKFPH 425
Query: 245 HENEIAQSCCADRIEKTANIWIH------NGFLNLEGRKMSKSNGNFITINELLETKKFG 298
HENEIAQ A + + N ++ MS + E K
Sbjct: 426 HENEIAQVEEALSKYSARQLRLAFLSHPWNTTMDYSENMMSSTMQTEKLFLEFFLNVKDI 485
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
R + A ++ + + + K + L +
Sbjct: 486 DRVYSAQTLK------------------EEKWNSAELELEKGLCQK---QNNIHRFLCDS 524
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFN 386
+NT ++ L +L +S
Sbjct: 525 INTPDVMKELKELINQSNSYIASKRSLK 552
>gi|25808810|gb|AAN73897.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L + E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808940|gb|AAN73962.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S +R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFSRIALVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|299752108|ref|XP_001830705.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
gi|298409681|gb|EAU91074.2| cysteinyl-tRNA synthetase [Coprinopsis cinerea okayama7#130]
Length = 820
Score = 149 bits (377), Expect = 8e-34, Method: Composition-based stats.
Identities = 116/443 (26%), Positives = 183/443 (41%), Gaps = 86/443 (19%)
Query: 80 IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
++R + + + + +F D +L + P R T+++P++I I I
Sbjct: 284 NHKSRSQQLDPGL---YRRLAAHWEAEFFSDMAKLNVVPPDVVTRVTDYVPEIINFIDRI 340
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-------HKKNPADFI 192
I +G+AY + FD + K+ + HKK+P+DF
Sbjct: 341 IQNGYAYSVGGNVYFDIRAFNQAPGHQYGKLIPWNENHGGMDDAGDTAPAAHKKSPSDFA 400
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
LWK S P EP WESPWG GRPGWHIECSAM++ LG+ DIH GG+DL+FPHH NE+AQS
Sbjct: 401 LWKASKPGEPFWESPWGPGRPGWHIECSAMATAILGEKLDIHSGGIDLLFPHHTNELAQS 460
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
+ + + +IH G L+++G KMSKS NFI+I ++L + + A +RLA L
Sbjct: 461 EAYFKTDSWVDCFIHTGHLHIQGLKMSKSLKNFISIKDIL-------QCYTADQLRLAFL 513
Query: 313 MTHYREPIDFTVQRLTEA------------------------------EILLSKWPQTST 342
+ + DF+ + + + + T
Sbjct: 514 LHPWHAKFDFSDEFMKSEVLTLEAFFANLFSRTRSLARAAQSSYPPPAQHFGAHEAVLRT 573
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF-------------NASA 389
A SAL N +++V A+ L KL ++ D F
Sbjct: 574 QLEDAKVAFRSALANSIDSVGALNVLRKLTSQTNIYIDRRGDFINVALLGSVTRWITKML 633
Query: 390 HILGI------EVCKEHLNKNISIAI-----EKLVQERLILLK-MKKFS----------- 426
+ G+ + + ++ AI E L + R + + K +
Sbjct: 634 QLFGLTIGDASNLASTRIREDEREAIVYPYLEALAKFRDGVRQLAK--ASVGPASGELLM 691
Query: 427 SADYIRKQ-LESKGFILEDYKNP 448
D +R + L G LED +
Sbjct: 692 LCDQLRDEVLPPLGVSLEDKPDG 714
Score = 131 bits (330), Expect = 2e-28, Method: Composition-based stats.
Identities = 41/117 (35%), Positives = 61/117 (52%), Gaps = 9/117 (7%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ K+ +YN+L + TE + ++ Y CGPTVYD +H+G+AR + DV+ R+L Y
Sbjct: 85 ELKLLLYNSLTKSKTEVTSASARPLKWYSCGPTVYDTSHLGHARNYVTQDVMRRILTD-Y 143
Query: 62 GEKCVTYVRNITDIDDKIIERARQ--------EHPSIPINDAISIITSKNTQQFVKD 110
+ YV N+TDIDDKIIER RQ + + D IS + +
Sbjct: 144 FGLNIQYVMNVTDIDDKIIERTRQHYFLDKFRQKHTRLTLDLISEVEEAVEAYCHEH 200
>gi|25808806|gb|AAN73895.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808916|gb|AAN73950.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 8e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808856|gb|AAN73920.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|302309006|ref|NP_986187.2| AFR640Wp [Ashbya gossypii ATCC 10895]
gi|299790899|gb|AAS54011.2| AFR640Wp [Ashbya gossypii ATCC 10895]
Length = 750
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ RL+ Y
Sbjct: 36 LKLYNSLTRTKDEFIPLSQGRNVTWYSCGPTVYDASHMGHARNYVSIDINRRLIED-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQEH
Sbjct: 95 YHVEFVQNVTDIDDKIILRARQEHL 119
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 111/430 (25%), Positives = 178/430 (41%), Gaps = 74/430 (17%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ S+ D + + F D RL P+ R + ++ +++ I+ I+ +G+
Sbjct: 216 RSGASVRDPDVFRALAAHWENSFNADMERLGVRPPSVTTRVSEYVDEIVKFIERIVANGY 275
Query: 145 AY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFILWK 195
AY ++ + FDT G + + + K+NP DF LWK
Sbjct: 276 AYATSDGSVYFDTVQFEAGGHAYPKCQPWNRGVADLIADGEGALATGTEKQNPNDFALWK 335
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
S EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQ+
Sbjct: 336 ASKAGEPEWPSPWGLGRPGWHIECSVMASDVLGERVDIHSGGIDLAFPHHDNELAQAEAC 395
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
++ N ++H G L++EG+KMSKS NFITI+E L + + A +RLA M+
Sbjct: 396 FNSQQWVNYFLHTGHLHIEGQKMSKSLKNFITIDEAL-------KMYSARQLRLAFAMSP 448
Query: 316 YREPIDFTVQRLTEAEILL------------------------SKWPQTSTSKGIIDPAV 351
+ P+DF + + + + V
Sbjct: 449 WGSPLDFKEATMVQVRGWESAMGNFFRTVRALANDGDGKTRPGVREAELRAHLADAAARV 508
Query: 352 LSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHIL---GIEVCK 398
L ++L+T S ++ L +L + + + + IL GI
Sbjct: 509 HENLCDNLSTHSVLRCLGELVGRANAYIGAAGPEARVESVAAVARFCTRILAAMGIPARA 568
Query: 399 EHLN-------------KNISIAIEKLVQERLILLK-------MKKFSSADYIRK-QLES 437
+ L I + L + R + K + + D +R L +
Sbjct: 569 DGLGWLEQQAGAAEAGEAAILPYVRCLARFRDEVRKGARGGDTARLLAITDRVRDVDLPA 628
Query: 438 KGFILEDYKN 447
G +LED ++
Sbjct: 629 LGVLLEDRQD 638
>gi|25808876|gb|AAN73930.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALADTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|30959114|gb|AAO73316.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTDTPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808862|gb|AAN73923.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808870|gb|AAN73927.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (376), Expect = 9e-34, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808874|gb|AAN73929.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFETLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808860|gb|AAN73922.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|302698421|ref|XP_003038889.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
gi|300112586|gb|EFJ03987.1| hypothetical protein SCHCODRAFT_80995 [Schizophyllum commune H4-8]
Length = 768
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 40/113 (35%), Positives = 61/113 (53%), Gaps = 1/113 (0%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +K+YNTL + EF + ++ Y CGPTVYD +H+G+AR + D+L R++ Y
Sbjct: 16 EPVLKVYNTLTKAKNEFIPSNGRLVKWYNCGPTVYDASHMGHARNYVSQDILRRIMSD-Y 74
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V NITDID+KII+RAR+ H + +T + Q
Sbjct: 75 FGYDVHFVMNITDIDNKIIDRARKTHLLETFLKESTQLTPELIAQTEDAWRLY 127
Score = 146 bits (368), Expect = 8e-33, Method: Composition-based stats.
Identities = 112/451 (24%), Positives = 178/451 (39%), Gaps = 89/451 (19%)
Query: 80 IERARQ---EHPSIPINDAISI------ITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
I A + E ++ + + +F D RL P R T ++P
Sbjct: 209 INAANEVLEELLDQKYKSTVTDPSLSRNLAAYWEGRFFDDMARLRVRRPDTVTRVTEYVP 268
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE----QKMGTRVPEKYHKK 186
+++ +Q +I +G+AYE+ + FDT + + K++ + ++
Sbjct: 269 EIVAFVQKVIDNGYAYESAGSVYFDTQAFDAAPNHFYAKLEPYSKGNREDDGGSRAAGQR 328
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ +DF LWK S P EP WESPWG GRPGWHIECS M+S LG DIH GG+DL FPHH+
Sbjct: 329 SASDFALWKASKPGEPYWESPWGHGRPGWHIECSVMASAILGDNMDIHSGGVDLAFPHHD 388
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
NE+AQS N ++H G L++EG KMSKS NFITI+E+LE + A
Sbjct: 389 NEMAQSEAYHDCSAWVNYFLHTGHLHIEGLKMSKSLKNFITIDEILER-------FTARQ 441
Query: 307 IRLAMLMTHYREPIDFTVQRLT----------------------EAEILLSKWPQTSTSK 344
+RL+ L + +DF+ + +A+ K +
Sbjct: 442 LRLSFLSQLWNAKLDFSEALMQGEVRGIEAQFNNFFTLVKALISDAKASGQKSDGYHHYE 501
Query: 345 G----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN-------- 386
A +AL + NT A+ L L + +
Sbjct: 502 AQEAELTKALYEAQAAFRAALCDSFNTPVALNVLRDLVSRTNVYVNSRGKLVNLAVVEQV 561
Query: 387 -----ASAHILGI-------------EVCKEHLNKNISIAIEKLVQERLILLK------- 421
+ G+ + E + + + + R + K
Sbjct: 562 ARWVGKMLRMFGLGEGEVDEIGWGNADQTSEQKEEVLMPYLRAMSAFRDAVRKVAIEKSP 621
Query: 422 --MKK-FSSADYIRK-QLESKGFILEDYKNP 448
+K + +D +R L G L+D ++
Sbjct: 622 SALKDILALSDRLRDVDLVPLGVALDDQEDG 652
>gi|25808950|gb|AAN73967.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|154285550|ref|XP_001543570.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
gi|150407211|gb|EDN02752.1| hypothetical protein HCAG_00616 [Ajellomyces capsulatus NAm1]
Length = 665
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/113 (33%), Positives = 59/113 (52%), Gaps = 4/113 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT-SKNTQQFVKDTT 112
Y + V ++ NITD+DDKI+ A + + + + ++ K
Sbjct: 83 YFKFDVEFIMNITDVDDKIVRSAFAAFLERNLPLLEAGLAPERYGEEAEKVYA 135
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 96/356 (26%), Positives = 152/356 (42%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T K +F++D L L P R T ++P+++ ++ I+ H Y ++ + F
Sbjct: 213 FTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHRFGYVTSDGSVYF 272
Query: 155 D---------TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D + + + K+ + G + K++ ADF LWK S EP W
Sbjct: 273 DIGAFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWP 332
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS +
Sbjct: 333 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHW 392
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L++ +++ I+
Sbjct: 393 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLSAWKDGIE 447
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGII----------------------DPAVLSALYNDL 359
T + K + AV +L +
Sbjct: 448 ITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPGSADNTLAVALKSAQDAVHQSLCDSF 507
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + ++ G+ I
Sbjct: 508 NTAGAMYAISELISKYNIADKSTIPTKHIQEAAMWVTSMVNVFGLNGSAPPTPTEI 563
>gi|25808898|gb|AAN73941.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSLHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALADTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808836|gb|AAN73910.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808942|gb|AAN73963.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|30959116|gb|AAO73317.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808842|gb|AAN73913.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808920|gb|AAN73952.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|332267015|ref|XP_003282484.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic, partial
[Nomascus leucogenys]
Length = 656
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 28 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 86
Query: 74 DIDDKIIERARQEHPSIPIND 94
DIDDKII+RARQ H +
Sbjct: 87 DIDDKIIKRARQNHLFEQYRE 107
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 91/274 (33%), Positives = 133/274 (48%), Gaps = 20/274 (7%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 193 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
++ + FDT S +YG + +QK K++P DF L
Sbjct: 253 VSSGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+++ +D++ + A + + I
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDI 459
>gi|25808918|gb|AAN73951.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 149 bits (375), Expect = 1e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808848|gb|AAN73916.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLVFPHHENEACQTRCAFG 212
>gi|25808812|gb|AAN73898.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAIKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808906|gb|AAN73945.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 1e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 121/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L + E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLEWSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|149246696|ref|XP_001527773.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447727|gb|EDK42115.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 188
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++IYN+L R EF ++ P + Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 51 SPLRIYNSLTRSKDEFISLQPGQVTWYSCGPTVYDHSHMGHARNYVSTDICRRILQD-YF 109
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V +++N+TDIDDKII ARQ++
Sbjct: 110 GYNVKFIQNVTDIDDKIIIAARQQYL 135
>gi|255716136|ref|XP_002554349.1| KLTH0F03168p [Lachancea thermotolerans]
gi|238935732|emb|CAR23912.1| KLTH0F03168p [Lachancea thermotolerans]
Length = 773
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 2/99 (2%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++K+YN+L R+ +F I + Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 44 PRLKLYNSLTRQKEDFVTISGDKNVTWYSCGPTVYDSSHMGHARNYVSIDINRRILQD-Y 102
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIIT 100
+ +V+N+TD+DDKII RARQ H +T
Sbjct: 103 FGYRIRFVQNVTDVDDKIILRARQSHLFERFAAENKEVT 141
Score = 133 bits (334), Expect = 7e-29, Method: Composition-based stats.
Identities = 108/447 (24%), Positives = 176/447 (39%), Gaps = 90/447 (20%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + ++F KD L L P+ R + ++P+++ ++ II +G
Sbjct: 226 KESGSTINEPEIFRKLPAFWEREFNKDMAALNVLEPSVTTRVSEYVPEIVDFVKRIIDNG 285
Query: 144 HAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKNPAD 190
+AY + + FDT + K G K++ D
Sbjct: 286 YAYATGDGSVYFDTVAFDKSEKHDYAKCQPWNKGKLDLINDAEGSLSNFSSTNGKRSSND 345
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP W+SPWG+GRPGWHIECS M+ LG DIH GG+DL FPHH+NEIA
Sbjct: 346 FALWKSSKPGEPEWDSPWGKGRPGWHIECSVMACDVLGPNIDIHTGGIDLAFPHHDNEIA 405
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS + N ++H G L++EG+KMSKS NFITI E L + + A +RLA
Sbjct: 406 QSEAFYDNHQWVNYFLHTGHLHIEGQKMSKSLKNFITIGEAL-------KKYSARQLRLA 458
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------------- 344
+ +DF L E + L + +
Sbjct: 459 FSSAQWNSQLDFKEVLLVEVKSLEQSFNNFFRNARALKADLAHREDMGQHVSKKLGDKEK 518
Query: 345 ------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIF 385
V +A ++L+T A++ L +L ++ +++
Sbjct: 519 SLLTELAAFQDKVHNAFCDNLSTPVALKFLSELVTKANLYISSAGSDIRIEPLLEVVRYI 578
Query: 386 NASAHILGIEVCKEHLNKNISI----------------AIEKLVQERLILLK---MK--- 423
++G +HL ++ L R + + K
Sbjct: 579 TKILEVIGFPSRDDHLGWLDEAGGQSQTGENREELLMPYVKCLSNFRDDVRRLAIDKASS 638
Query: 424 -KF-SSADYIRK-QLESKGFILEDYKN 447
+F D +R + ++D +
Sbjct: 639 TEFLKLTDRVRDNDILDLNVSIDDRSD 665
>gi|25808958|gb|AAN73971.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808930|gb|AAN73957.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFG 212
>gi|25808798|gb|AAN73891.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (374), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808946|gb|AAN73965.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|156848081|ref|XP_001646923.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
70294]
gi|156117605|gb|EDO19065.1| hypothetical protein Kpol_2000p30 [Vanderwaltozyma polyspora DSM
70294]
Length = 769
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 2/97 (2%)
Query: 2 KKKIKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
K +K+YNTL R EF + Y CGPTVYD +H+G+AR + D+ R+L+
Sbjct: 36 KSVLKVYNTLTRSKEEFIPRSGTKEVSWYSCGPTVYDASHMGHARNYVSIDINRRILQD- 94
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
Y + +V+N+TDIDDKII RARQ H +I
Sbjct: 95 YFGYNINFVQNVTDIDDKIILRARQNHLFEEYVKSID 131
Score = 139 bits (350), Expect = 1e-30, Method: Composition-based stats.
Identities = 116/446 (26%), Positives = 178/446 (39%), Gaps = 91/446 (20%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ SI + + + Q+ D +L L P R + ++P++I ++ II +G
Sbjct: 220 KELGSSINHPEIFRKLPAYWEHQYDNDMAKLNVLPPNVTTRVSEYVPEIIEFVEKIISNG 279
Query: 144 HAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKNPAD 190
+AY + + FDT + S K G KK+P+D
Sbjct: 280 YAYAADDGSVYFDTQNFDTSKDHSYAKCQPWNKGHLDLINDAEGSLSNFSNTNGKKSPSD 339
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP WESPWG+GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+A
Sbjct: 340 FALWKASKPGEPEWESPWGKGRPGWHIECSVMASDILGQNIDIHSGGIDLAFPHHDNELA 399
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS + N ++H G L++EG+KMSKS NFITI+E L + + A +RLA
Sbjct: 400 QSEAHFDNNQWINYFLHTGHLHIEGQKMSKSLKNFITIDEAL-------KMYSARQLRLA 452
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSA---------------- 354
+ +DF + E + + + ++ ++
Sbjct: 453 FASVQWNNQLDFKESLINEVRSTETSFNNFFANVRALNNDYINIISQPNGFVSKKLGSLE 512
Query: 355 -----------------LYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNA 387
++L T A++AL L + ++ I
Sbjct: 513 RQLLEDFKIAQEKVDIAFCDNLATPQALKALSDLVTLTNTYISSVGNDIRIEPIISICKF 572
Query: 388 SAHILGIEVC-----------KEHLNKNISIAIEK--------LVQERLILLK---MK-K 424
I GI + N ++E+ L + R I+ K
Sbjct: 573 ITKIFGIIGFPVRSDGLGWENADSSNAANGSSVEETVMPYVQCLSKFRDIVRSLSIEKAN 632
Query: 425 F----SSADYIR-KQLESKGFILEDY 445
+ D IR L L+D
Sbjct: 633 YVEFLKLTDQIRDDDLLKLNIALDDR 658
>gi|25808922|gb|AAN73953.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG+DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGVDLLFPHHENEACQTRCAFG 212
>gi|25808938|gb|AAN73961.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808824|gb|AAN73904.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L + E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLEWSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808816|gb|AAN73900.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808914|gb|AAN73949.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCTFG 212
>gi|25808864|gb|AAN73924.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808872|gb|AAN73928.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808884|gb|AAN73934.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808890|gb|AAN73937.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|25808896|gb|AAN73940.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N ++ ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808844|gb|AAN73914.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 148 bits (373), Expect = 2e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|225710076|gb|ACO10884.1| Cysteinyl-tRNA synthetase, cytoplasmic [Caligus rogercresseyi]
Length = 122
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/87 (43%), Positives = 54/87 (62%), Gaps = 2/87 (2%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +YN+L ++ F S + Y CGPTVYD +H+G+AR + FD+L R++ Y
Sbjct: 20 SPGLSLYNSLTKRKEVFVP-RGSTVTWYNCGPTVYDASHMGHARTYLSFDILRRVM-SKY 77
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHP 88
+ YV NITDIDDKII+R+RQ H
Sbjct: 78 FGYNIFYVMNITDIDDKIIKRSRQNHL 104
>gi|25808904|gb|AAN73944.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|62087208|dbj|BAD92051.1| cysteine-tRNA ligase isoform b variant [Homo sapiens]
Length = 281
Score = 147 bits (372), Expect = 2e-33, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 58 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 116
Query: 74 DIDDKIIERARQEHPSIPIND 94
DIDDKII+RARQ H +
Sbjct: 117 DIDDKIIKRARQNHLFEQYRE 137
>gi|291234575|ref|XP_002737225.1| PREDICTED: cysteinyl-tRNA synthetase-like [Saccoglossus
kowalevskii]
Length = 739
Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 55/96 (57%), Gaps = 1/96 (1%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +YN+L R+ F + + Y CGPTVYD +H+G+AR + +FD+L R+L Y
Sbjct: 22 NSQLYLYNSLTRQRELFIPQNGKQVLWYSCGPTVYDASHMGHARSLHIFDILRRIL-SEY 80
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
V Y NITDIDDKII RARQ + +
Sbjct: 81 FNYDVVYCMNITDIDDKIIRRARQNYLYEEYKKTVQ 116
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 104/445 (23%), Positives = 175/445 (39%), Gaps = 85/445 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ + N S++ +++ +D + L R +++IP+++ ++ II +G
Sbjct: 194 AKSGHEVTDNSIFSLLPKYWEEEYHRDMASINVLPADVLTRVSDYIPEVVEYVKKIIDNG 253
Query: 144 HAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPAD 190
+ Y +N + F S+ +Y + + K KK+ D
Sbjct: 254 YGYVSNGSVYFSVSTFDNDPNHSYAKLVPEAVGDCKALEEGEGDLSISQDRLDEKKSQVD 313
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F +WK+S P EP W+SPWG+GRPGWHIECS M+S LG+ DIH GG DL FPHH+NE+A
Sbjct: 314 FAVWKKSKPGEPAWDSPWGKGRPGWHIECSVMASCILGESLDIHTGGFDLRFPHHDNELA 373
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
Q+ + ++H+G L ++G KMSKS NFITI + LE +RL
Sbjct: 374 QAEAYYGNDHWVRYFLHSGHLTIQGCKMSKSLKNFITIKDALENHTSRQ-------LRLV 426
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII----------------------- 347
L+ +++ +D++ + A + + I
Sbjct: 427 FLLHSWKDTLDYSDNTMESAVQYEKFIGEFFLTVKDILRNAADGPEKFLKWGESELKLNE 486
Query: 348 -----DPAVLSALYNDLNTVSAIQALHKLARESTKN----------------HDLLPIFN 386
V AL + ++T SA++ + L S ++
Sbjct: 487 QFQECKCKVHDALCDSVDTRSAMERMRDLVGNSNIYIRDMKAAKLLPNSILLRNIAVYLT 546
Query: 387 ASAHILGIEVCKEHL---------NKNISIAI--------EKLVQERLILLKMK---KFS 426
I G E + N N+ + + + R + + K
Sbjct: 547 KILKIFGAIEGDETIGFPMSVGDNNTNVEDTVMPYVKVFADFRDKVRQVAREQKVVEVLK 606
Query: 427 SADYIRKQ-LESKGFILEDYKNPDN 450
D +R L G LED++
Sbjct: 607 LCDEVRDDILPELGVRLEDHEGQPT 631
>gi|119622942|gb|EAX02537.1| cysteinyl-tRNA synthetase, isoform CRA_b [Homo sapiens]
gi|193788362|dbj|BAG53256.1| unnamed protein product [Homo sapiens]
Length = 738
Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 28 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 86
Query: 74 DIDDKIIERARQEHPSIPINDAISIITS 101
DIDDKII+RARQ H +
Sbjct: 87 DIDDKIIKRARQNHLFEQYREKRPEAAQ 114
Score = 138 bits (348), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 545
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 606 ALRDNILPELGVRFEDHEG 624
>gi|297687908|ref|XP_002821441.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 4
[Pongo abelii]
Length = 738
Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 28 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 86
Query: 74 DIDDKIIERARQEHPSIPIND 94
DIDDKII+RARQ H +
Sbjct: 87 DIDDKIIKRARQNHLFEQYRE 107
Score = 139 bits (351), Expect = 6e-31, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 545
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 606 ALRDDILPELGVRFEDHEG 624
>gi|25808820|gb|AAN73902.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (372), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|114635640|ref|XP_001155891.1| PREDICTED: cysteinyl-tRNA synthetase isoform 3 [Pan troglodytes]
gi|332835583|ref|XP_001156119.2| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 6 [Pan
troglodytes]
Length = 738
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 38/81 (46%), Positives = 48/81 (59%), Gaps = 1/81 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 28 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 86
Query: 74 DIDDKIIERARQEHPSIPIND 94
DIDDKII+RARQ H +
Sbjct: 87 DIDDKIIKRARQNHLFEQYRE 107
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 193 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 486 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 545
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 546 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 605
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 606 ALRDDILPELGVRFEDHEG 624
>gi|315055169|ref|XP_003176959.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311338805|gb|EFQ98007.1| cysteinyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 818
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 60/99 (60%), Gaps = 3/99 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++++N+L R T F DP+ + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 22 PPLRVWNSLTRSKTHFVPADPNGQKVTWYACGPTVYDDAHLGHARNYVTTDILRRIMRD- 80
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
Y + V ++ NITD+D+KII RARQ+H D I
Sbjct: 81 YFKFDVNFIMNITDVDNKIIIRARQQHLFAEYKDKHPDI 119
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 98/355 (27%), Positives = 150/355 (42%), Gaps = 50/355 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+T +F++D L L P + T HI ++I ++ II +G AY + + F
Sbjct: 252 FEALTKNYESRFLEDMRCLNVLEPDKLTKVTTHISEIIQFVKTIIGNGFAYSTPDGSVYF 311
Query: 155 DTSSIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ + G + + G+ K + DF+LWK S P EP W
Sbjct: 312 NINKFEESGHYYAKLEPWNRHNKHLQRDGEGSLSKGATSKLSRNDFVLWKASRPGEPSWP 371
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
SPWG GRPGWHIECSAM+S G DIH GG+DL FPHH+NE+AQS + N +
Sbjct: 372 SPWGNGRPGWHIECSAMASANFGSQMDIHSGGIDLAFPHHDNELAQSEAFWGGTQWVNYF 431
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+H G L+++G KMSKS NF TI E L+ + R+ +R+ L++ +RE I+ T
Sbjct: 432 LHMGHLSIQGSKMSKSLKNFTTIREALDRGTWTSRN-----LRIVFLLSGWREGIEITTD 486
Query: 326 RLTEAEILLSKWPQTS-------------------------TSKGIIDPAVLSALYNDLN 360
+ + K T V +AL N +
Sbjct: 487 MVDASRAWEEKLNNFFLKSRNFKALHKLASEAPNNRCDALETHLKFAQDKVFNALCNSFD 546
Query: 361 TVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCKEHLNKNI 405
T +A+ A+ +L + + ++ G+ + I
Sbjct: 547 TPTAMSAITELVTVFNSAEPPKLNNVILQNAAKWITSMVNVFGLNGDASPEDPEI 601
>gi|25808888|gb|AAN73936.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N ++ ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGIIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRCAFG 212
>gi|25808948|gb|AAN73966.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (371), Expect = 3e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ H+ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEHLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCTFG 212
>gi|109105041|ref|XP_001096069.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic isoform 2 [Macaca
mulatta]
Length = 738
Score = 147 bits (371), Expect = 4e-33, Method: Composition-based stats.
Identities = 38/75 (50%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 14 KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
F D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NIT
Sbjct: 28 TKEVFIPQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNIT 86
Query: 74 DIDDKIIERARQEHP 88
DIDDKII+RARQ H
Sbjct: 87 DIDDKIIKRARQNHL 101
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 173/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 193 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 252
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 253 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 312
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 313 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 372
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 373 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 425
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 426 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 485
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 486 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 545
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + N+ + + L + R I + K +D
Sbjct: 546 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 605
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 606 ALRDDILPELGVRFEDHEG 624
>gi|25808840|gb|AAN73912.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRALELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFKTLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|260948980|ref|XP_002618787.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
gi|238848659|gb|EEQ38123.1| hypothetical protein CLUG_02246 [Clavispora lusitaniae ATCC 42720]
Length = 762
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 37/84 (44%), Positives = 55/84 (65%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+KIYN+L R +F + I Y CGPTVY++AH+G+AR + D+ R+L+ Y
Sbjct: 31 LKIYNSLTRAKEDFVPQKFNYITWYCCGPTVYNYAHMGHARNYVCSDICRRILQD-YFGY 89
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
+ +V+N+TDIDDKII ARQ++
Sbjct: 90 NINFVQNVTDIDDKIIISARQQYL 113
Score = 145 bits (367), Expect = 1e-32, Method: Composition-based stats.
Identities = 116/446 (26%), Positives = 181/446 (40%), Gaps = 91/446 (20%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S+ + + F +D +L L PT R + ++P++I + II +G AY
Sbjct: 215 GSSVVEPSIFKKLPAYWENSFNEDMAKLNVLPPTVTTRVSEYVPEIIDFVDKIISNGFAY 274
Query: 147 -EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK-----------KNPADFILW 194
A+ + FDT+ N + K+ G+ + KNPADF LW
Sbjct: 275 VTADGSVYFDTAKFENDPNHDYAKLQPWNKGSMSLINDGEGSLSVSESIIKKNPADFSLW 334
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W+S WG GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 335 KASKPGEPAWDSKWGPGRPGWHIECSVMASDILGSTIDIHSGGIDLCFPHHDNELAQSEA 394
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++HNG L+++G+KMSKS NFITI E L +++ + +RL
Sbjct: 395 YFDNKQWINYFMHNGHLHIQGQKMSKSLKNFITIEEAL-------QNYTSRQLRLIFAFG 447
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTST-------------------------------- 342
++ +PIDF + E + S + T
Sbjct: 448 NWDKPIDFKDSLVHEVKAYESSLSKFFTTVRALNTDYKHSVSSGQAISKKLSSAERSLLS 507
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----------------LLPIFN 386
A ++L++ ++ + L ++ +
Sbjct: 508 DLETAQKEAHLAFCDNLSSPQVLRVISDLVSKTNTYIQSTVVGQNELRIEPVIAITKWIV 567
Query: 387 ASAHILGIEVCKEHLNKNISIA----------------IEKLVQERLILLK---MK---- 423
ILG E + L S++ ++ L Q R + K
Sbjct: 568 KILDILGFEARSDRLGWVDSVSGESDTGASKEDVAMPYVKSLSQFRDTVRDLAISKAESS 627
Query: 424 KF-SSADYIRKQLESKGFILEDYKNP 448
+F ++D +R +L G L+D
Sbjct: 628 EFLKASDALRGELIELGISLDDRPTG 653
>gi|169615663|ref|XP_001801247.1| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
gi|160703013|gb|EAT81491.2| hypothetical protein SNOG_10992 [Phaeosphaeria nodorum SN15]
Length = 837
Score = 147 bits (370), Expect = 4e-33, Method: Composition-based stats.
Identities = 42/115 (36%), Positives = 64/115 (55%), Gaps = 3/115 (2%)
Query: 2 KKKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
+ K+K++N+L R EF +DP ++ Y CGPTVYD AH+G+AR + D+L R+L
Sbjct: 56 EAKLKVWNSLTRSKNEFVPVDPEGKVVKWYSCGPTVYDDAHLGHARNYVTIDILRRVL-A 114
Query: 60 YYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
Y + +V+NITD+DDKII R RQ++ +T + +K
Sbjct: 115 GYFGYNLRFVQNITDVDDKIILRGRQQYLLADFKSKNPTVTDELINTTIKAFDAY 169
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 109/476 (22%), Positives = 172/476 (36%), Gaps = 119/476 (25%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ + +T K +F +D L L P R T + Q++ ++ I+ +G AY
Sbjct: 264 IDASDHTVFTRLTQKYEARFNEDMRSLNVLDPNVVTRVTEYGDQIVTFVEKIVANGFAYS 323
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-----------HKKNPADFILWK 195
++ + FD + +++ G + + K++ +DF LWK
Sbjct: 324 TSDGSVYFDIEAFEKVPGNHYARLEPWNRGDKSLQADGEGALSQQKTSEKRSESDFALWK 383
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
S P EP W+SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 384 SSKPGEPAWKSPWGPGRPGWHIECSVMASDVLGEQMDIHSGGIDLCFPHHDNELAQSEAH 443
Query: 256 D----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
+ N ++H G L++ G KMSKS NF TI E L W A +R+
Sbjct: 444 WSSKEGGHQWVNYFLHMGHLSISGSKMSKSLKNFTTIREALARGD-----WNARSLRIIF 498
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------------GIID 348
L+ + + I+ T S
Sbjct: 499 LLGGWHDGIEITDDMRKGGASWESYVTNFFYKVRDLEVHPNIASTGAEDEKVRKAFDAAK 558
Query: 349 PAVLSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCK 398
V +AL + +T +A++A+ L + D+ I G++
Sbjct: 559 EKVHNALADSFDTPAAMRAISSLITDYNSADKAGLSDDVSFDVARYITRMVRIFGLDGSA 618
Query: 399 EHLNK-------NISIAIEKLV----QERLILLK-------------------------- 421
+ + +I ++ V ++R + K
Sbjct: 619 DPYDGGIGWAGIDIPSEAKEFVYAVSRDRDEVRKHAVAGDLSGEVLEDILAQHKPAQKQE 678
Query: 422 ---------------------MKK-----F-SSADYIRKQ-LESKGFILEDYKNPD 449
K F + D +R L G LED +N
Sbjct: 679 AAAVPYAEVLSTFQENLRDLAAKNAPTKDFLALCDQLRDTHLWDLGIYLEDRENAP 734
>gi|255027861|ref|ZP_05299847.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
Length = 300
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 108/307 (35%), Positives = 155/307 (50%), Gaps = 43/307 (14%)
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
MI +I +I G+AYE+ ++ F T +YG S +++ E + G RV K++ DF
Sbjct: 1 MIQMISTLIEKGYAYESAGDVYFQTKKFKDYGKLSGQELSELQHGARVEYNERKQDELDF 60
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK + P E WESP+G GRPGWHIECSA++ YLG DIH GG DL+FPHHE+EIAQ
Sbjct: 61 TLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLGDTIDIHAGGQDLVFPHHEDEIAQ 120
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S A + AN W+HN FLN++G KMSKS GNFIT++++L + VIR M
Sbjct: 121 SEAATG-KTFANYWMHNAFLNIDGEKMSKSLGNFITLHDVL-------KDNDPNVIRFFM 172
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG------------------------II 347
L HYR+PI L +A+ L + + +
Sbjct: 173 LSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDDGEYVEEAHEDEWLEQLTEL 232
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEV 396
A + +D NT +AI H+LA+ + + L + A +LG+++
Sbjct: 233 KQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLFAEVLGLKL 292
Query: 397 CKEHLNK 403
+
Sbjct: 293 ENTQTDS 299
>gi|25808804|gb|AAN73894.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 147 bits (370), Expect = 5e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSDYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808868|gb|AAN73926.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 146 bits (369), Expect = 5e-33, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCTFG 212
>gi|229077385|ref|ZP_04210045.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
gi|228705919|gb|EEL58245.1| hypothetical protein bcere0023_1000 [Bacillus cereus Rock4-2]
Length = 254
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 81/270 (30%), Positives = 120/270 (44%), Gaps = 49/270 (18%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
M+ YLG DIH GG DL FPHHENEIAQS + A W+HNG++N+ KMSKS
Sbjct: 1 MARKYLGDTIDIHAGGQDLAFPHHENEIAQSEALTG-KTFARYWMHNGYININNEKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNFI +++++ + + +IR ML HYR PI+F+ + L L +
Sbjct: 60 LGNFILVHDII-------KQYDPQLIRFFMLSVHYRHPINFSEELLQSTNNGLERIKTAY 112
Query: 342 TSK---------------------GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-- 378
+ A A+ +D NT +AI L+ +A + +
Sbjct: 113 GNLKHRMESSTDLTDHNEKWLAEIEKFQTAFEEAMNDDFNTANAITELYNVANHANQYLL 172
Query: 379 ---------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
+ ILG+E+ KE L + Q+R+ K + F+ +D
Sbjct: 173 EEHTSKVVIEAYVKQLETLFDILGLELSKEELLDEEIEELI---QKRIEARKNRDFALSD 229
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IR L+ + ILED + TRWK+
Sbjct: 230 QIRDDLKERNIILEDT------AQGTRWKR 253
>gi|19115476|ref|NP_594564.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
[Schizosaccharomyces pombe 972h-]
gi|1351621|sp|Q09860|SYC_SCHPO RecName: Full=Probable cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1044932|emb|CAA91428.1| putative cysteinyl-trna synthetase [Schizosaccharomyces pombe]
gi|6723893|emb|CAB66469.1| cytoplasmic cysteine-tRNA ligase Crs1 (predicted)
[Schizosaccharomyces pombe]
Length = 754
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 44/124 (35%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ ++ +YNTL F + + SN+ Y CGPTVYD +H+G+AR + D+L R+L+ Y
Sbjct: 18 RTELYVYNTLTHSKVPFVS-NGSNLTWYCCGPTVYDASHMGHARNYVTTDILRRILQ-SY 75
Query: 62 GEKCVTYVRNITDIDDKIIERARQE------HPSIPINDAISIITSKNTQQFVKDTTRLA 115
+T+V+N+TDIDDKII RARQ+ N + S K T+ + +
Sbjct: 76 FGYNITFVQNVTDIDDKIILRARQQYLFEEYKKQQGTNKSHSEAREKVTEAWFAYAKKNL 135
Query: 116 CLAP 119
P
Sbjct: 136 PEPP 139
Score = 132 bits (331), Expect = 2e-28, Method: Composition-based stats.
Identities = 102/367 (27%), Positives = 150/367 (40%), Gaps = 63/367 (17%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ ++ + + F KD L L PT R + ++P+++ +Q II G
Sbjct: 206 AELGSTVTDPAIFRKLAAYWEDDFNKDMANLNVLPPTAVTRVSEYVPEIVDFVQRIIDRG 265
Query: 144 HAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK---------KNPADFIL 193
+AY + + FDT + G F K++ G R + K P DF L
Sbjct: 266 YAYPVTDGSVYFDTEAFEKGGHFY-AKLEPWNKGNRELIAEGEGSLAALTGKKRPGDFAL 324
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPW +GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 325 WKASKPGEPSWDSPWSKGRPGWHIECSVMASALLGSNIDIHSGGIDLAFPHHDNELAQSE 384
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N + H G L++EG+KMSKS NFITI E+L + + +RLA L+
Sbjct: 385 AYFDCPQWVNYFFHAGHLHIEGQKMSKSLKNFITIKEIL-------KKFTPRQLRLAFLL 437
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTS------------------TSKGIIDPAVLS-- 353
+ +DF L + D +
Sbjct: 438 QQWNTQLDFKETLLAYVLNIEQALENFFRTVRALMNETEGVSANGGHVPEKFDKLEIELL 497
Query: 354 ------------ALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNAS 388
AL + NT +Q + L ++ + +
Sbjct: 498 EKFQQTQQNTHLALCDSFNTPLVMQHIDNLVTQANIYIREVGQQPCSRLLGQIASWITSM 557
Query: 389 AHILGIE 395
I G++
Sbjct: 558 LQIFGLD 564
>gi|25808928|gb|AAN73956.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E S I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKS------IQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|312220209|emb|CBY00150.1| similar to cysteinyl-tRNA synthetase [Leptosphaeria maculans]
Length = 803
Score = 146 bits (369), Expect = 6e-33, Method: Composition-based stats.
Identities = 45/113 (39%), Positives = 64/113 (56%), Gaps = 3/113 (2%)
Query: 4 KIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
K+K++N+L R EF IDP ++ Y CGPTVYD AH+G+AR + D+L R+L Y
Sbjct: 22 KLKVWNSLTRSKNEFAPIDPQGKLVKWYNCGPTVYDDAHLGHARNYVTIDILRRILSD-Y 80
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
E + +V+NITD+DDKII R RQ+H +T + +K
Sbjct: 81 FEYKLLFVQNITDVDDKIILRGRQQHLLAKFKKQNPTVTEEVINTTIKAFDAY 133
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 93/367 (25%), Positives = 149/367 (40%), Gaps = 54/367 (14%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + +T K +F +D L L P R T + Q++ ++ I+ +G AY+
Sbjct: 228 IDASDHSVFTKLTQKYEARFNEDMRSLNVLDPHVVTRVTEYGDQIVTFVEKIVDNGFAYK 287
Query: 148 A-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY-----------HKKNPADFILWK 195
+ + FD S +++ G + + K++ ADF LWK
Sbjct: 288 TSDGSVYFDIDSFEKIPGNHYARLEPWNRGDKGLQADGEGALSTQKTSEKRSDADFALWK 347
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN----EIAQ 251
S P EP W SPWG GRPGWHIECS M+S LGK D+H GG+DL FPHH+N A
Sbjct: 348 SSKPGEPAWNSPWGPGRPGWHIECSVMASDVLGKQMDVHSGGIDLCFPHHDNELAQSEAH 407
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
D + N ++H G L++ G KMSKS NF TI E L + W A +R+
Sbjct: 408 WSGKDGGHQWVNYFLHMGHLSISGSKMSKSLKNFTTIREALAR-----KDWNARSLRIIF 462
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV-------------------- 351
L+ + + I+ T + S ++
Sbjct: 463 LLGGWHDGIEITDDMRKQGASWESYVSNFFYKVKDLEVHPNMTSTTTEEERITQAFESAK 522
Query: 352 ---LSALYNDLNTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIEVCK 398
+AL + +T +A++ + +L + D+ + G++
Sbjct: 523 TKVHNALADSFDTPTAMRTIAQLITDYNSASKSGLSDGLSFDIARYITRIVRVFGLDGSA 582
Query: 399 EHLNKNI 405
+ + I
Sbjct: 583 DPNDGTI 589
>gi|25808934|gb|AAN73959.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 146 bits (368), Expect = 7e-33, Method: Composition-based stats.
Identities = 83/222 (37%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AYE +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYEISNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRCTFG 212
>gi|308802207|ref|XP_003078417.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
gi|116056869|emb|CAL53158.1| Cysteinyl-tRNA synthetase (ISS) [Ostreococcus tauri]
Length = 503
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 50/78 (64%), Gaps = 1/78 (1%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++ NT + F + +++ Y+CGPTVYD AH+G+AR + FDVL R++ Y
Sbjct: 48 RLLNTFTKTKVPFVPLSGNSVGWYICGPTVYDSAHVGHARNYVNFDVLRRVM-SEYFGYD 106
Query: 66 VTYVRNITDIDDKIIERA 83
V +V N+TDIDDKII RA
Sbjct: 107 VRFVMNVTDIDDKIIMRA 124
Score = 120 bits (300), Expect = 7e-25, Method: Composition-based stats.
Identities = 95/246 (38%), Positives = 131/246 (53%), Gaps = 17/246 (6%)
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
I D + + +F++D L P R + ++ ++I IQ II G AYE+
Sbjct: 196 DWKIQDGYLELAREFEAEFMEDMKSLGIARPDALTRVSEYVDKVILYIQVIINKGFAYES 255
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP----------EKYHKKNPADFILWKRST 198
NN + FD + + K+++ M EK K++ DF+LWK S
Sbjct: 256 NNSVYFDVKAFEEAENHKYGKLNKNAMANVEEAMDGEGALAAEKSEKRSEFDFVLWKASK 315
Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRI 258
EP W SPWG GRPGWHIECSAM S LGK DI+GGG+DL FPHHEN++AQS I
Sbjct: 316 SGEPSWSSPWGMGRPGWHIECSAMCSDVLGKSVDINGGGIDLNFPHHENQLAQSEAHYDI 375
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
E+ N +IH G L+++G KMSKS NFITI L + + A IR L+ + +
Sbjct: 376 EQWVNFFIHTGHLHIDGLKMSKSLKNFITIRAAL-------KMYSARQIRFLFLLNQWCD 428
Query: 319 PIDFTV 324
P++ T
Sbjct: 429 PMELTP 434
>gi|25808952|gb|AAN73968.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 82/222 (36%), Positives = 120/222 (54%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSDYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 212
>gi|25808912|gb|AAN73948.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 211
Score = 145 bits (366), Expect = 1e-32, Method: Composition-based stats.
Identities = 83/220 (37%), Positives = 116/220 (52%), Gaps = 17/220 (7%)
Query: 45 RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNT 104
R I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 RSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYI 52
Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYG 163
+ + +D L P+ +P+A+ H+ M+ +I+ ++ AY +N +I DTS +YG
Sbjct: 53 ESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYG 112
Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM 222
S S R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 113 SLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSM 170
Query: 223 -----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+ DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 VFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 210
>gi|223994283|ref|XP_002286825.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220978140|gb|EED96466.1| cysteinyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 807
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/93 (39%), Positives = 53/93 (56%), Gaps = 1/93 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ + NTL K F + +++ Y CGPTVYD +H+G+AR + FD++ R++ Y
Sbjct: 42 LLLRNTLTGKKEPFVPMQSRHVKWYTCGPTVYDSSHVGHARTYLSFDIMRRIMTD-YFHY 100
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
V Y N TDIDDKII RARQ + + S
Sbjct: 101 NVLYQINTTDIDDKIILRARQNELMRLLEEDPS 133
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 108/457 (23%), Positives = 173/457 (37%), Gaps = 97/457 (21%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
R++ I + + + ++F++D L P R T ++P+++ ++ II G
Sbjct: 231 REKGHLITDHSVFNAHARRYEREFMEDMAALGIREPDILTRVTEYVPKIVAFVETIISKG 290
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR---------------KIDEQKMGTRVPEKYHKKNP 188
AY++N + + G R+ + + V K+NP
Sbjct: 291 LAYKSNGSVYLSLDAFQEAGHNYRKLNPAGPGGAATTAAEMAEGEGALGGVGGDSEKRNP 350
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
DF LWK S EP WESP+G GRPGWHIECS ++ LG+ DIH GG DL FPHH+NE
Sbjct: 351 NDFALWKASKAGEPAWESPFGPGRPGWHIECSVVAGDILGERIDIHSGGEDLKFPHHDNE 410
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
+AQS + N + H G L++EG KMSKS NFITI + LE A +R
Sbjct: 411 LAQSEACFGCNQWVNYFTHTGHLHIEGLKMSKSLKNFITIRQALEHNT-------ARQLR 463
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIID-------------------- 348
+ L+ + +P++++ Q + +A + + +
Sbjct: 464 IMFLLQGWDQPMNYSDQTIDDARSKETTFKSFFREVEALTRDDYLSEEVGWRMEEHDHKL 523
Query: 349 --------PAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDLLPIFNA 387
+V +L ++ NT A+ AL K+ E+ +
Sbjct: 524 ADAYLTARQSVHESLLDNFNTKEAMGALLKVINEANAYLRTANAKPSVLLLRSIATYITE 583
Query: 388 SAHILGI----------------EVCKEHLNKNISIAIEKLVQERLILL-----KMK--K 424
+ G+ + I +V R + K
Sbjct: 584 ILKVFGVVSGSDEFGFGSGGSGDGNVESTDGSGSEPFIGAMVSFRESVRNEALEAAKGGD 643
Query: 425 FSSA---------DYIRKQ-LESKGFILEDYKNPDNG 451
+ A D +R + L G LED
Sbjct: 644 -AQAAIQSILQICDGLRDEVLPKLGVRLEDRPAGTMW 679
>gi|323352855|gb|EGA85157.1| YNL247W-like protein [Saccharomyces cerevisiae VL3]
Length = 637
Score = 145 bits (365), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 19/258 (7%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTE 329
+ +DF + E
Sbjct: 455 ASVQWNNQLDFKESLIHE 472
>gi|207341909|gb|EDZ69841.1| YNL247Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 610
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 134 bits (338), Expect = 2e-29, Method: Composition-based stats.
Identities = 93/258 (36%), Positives = 134/258 (51%), Gaps = 19/258 (7%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTE 329
+ +DF + E
Sbjct: 455 ASVQWNNQLDFKESLIHE 472
>gi|168027561|ref|XP_001766298.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162682512|gb|EDQ68930.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 736
Score = 144 bits (364), Expect = 2e-32, Method: Composition-based stats.
Identities = 109/427 (25%), Positives = 158/427 (37%), Gaps = 110/427 (25%)
Query: 58 RYYYGEKCVTYVRNITDIDDKI--------------------------------IERARQ 85
R Y V YV NITD+DDKI +ERA +
Sbjct: 76 RQDYFHYDVKYVMNITDVDDKIINRARRNHLMDQYRSAATDLNKGLMGTQVIEDLERAVE 135
Query: 86 E-------HPSIPINDAIS--------IITSK-----------------------NTQQF 107
E S + + + +F
Sbjct: 136 EELGKQQKKISETGEEFAKATLSRQKDELADRGEPSRSVCHFGSLPSRCISVLVMYENEF 195
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR 167
D + L C P R T ++ +++ ++ I+ + AY AN + FDT + G
Sbjct: 196 WDDMSALGCGYPDVLVRVTEYMDKIVEYVEVIVANKFAYVANESVYFDTRAFREAGHRYG 255
Query: 168 RKIDEQKMGTRVPEKYHKKNP-------ADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
+ + + + DF LWK+S P EP W+SPWG GRPGWHIECS
Sbjct: 256 KLNPAAVGSSMLASESESNFDTSEKRTSCDFALWKKSKPGEPSWDSPWGPGRPGWHIECS 315
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
AM+S LG DIH GG DL FPHH+NE+AQS + + H+G L+++G KMSK
Sbjct: 316 AMASDILGDSIDIHTGGHDLQFPHHDNELAQSEAYFHCHEWVRYFFHSGHLSIDGLKMSK 375
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
S NFITI L + A +R ++ + + I+F+ + EA +
Sbjct: 376 SLKNFITIKTALTM-------YTARQLRTLFVIQSWDKSINFSTTVVNEALGKEKQLKNF 428
Query: 341 STSK--------------------------GIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ V L ++ +T AI L L R+
Sbjct: 429 FANVESHLRQHPMEGVQRPGLDEKQLLSRVDQAQIQVRERLEDNFDTAGAISELLSLVRD 488
Query: 375 STKNHDL 381
D
Sbjct: 489 VHSYIDK 495
>gi|323700693|ref|ZP_08112605.1| cysteine synthase [Desulfovibrio sp. ND132]
gi|323460625|gb|EGB16490.1| cysteine synthase [Desulfovibrio desulfuricans ND132]
Length = 759
Score = 144 bits (364), Expect = 3e-32, Method: Composition-based stats.
Identities = 85/454 (18%), Positives = 155/454 (34%), Gaps = 64/454 (14%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
Y GP++ + + + R +++ DV R L + V +TD+DD+ + AR+
Sbjct: 324 YTMGPSLDNPDGLDSWRRLVLLDVFLRHLAGRGVKAS--GVAGLTDMDDRTLAAAREADT 381
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
+ + + + + P ++ + L + ++ G AYE
Sbjct: 382 DR------ASLAESRREDILARGRAMGLSDELKFPLSSASNETALSLCRKLLGKGLAYEK 435
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH-KKNPADFILWKRST----PMEPG 203
+ FD YG +D+ G V + K NP DF L KR++
Sbjct: 436 LRSVYFDVFRDKRYGEIGTVDMDKVSGGRTVDLDAYVKDNPLDFTLLKRASLMDLKRGEV 495
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
E+ WG RP W ++ +AM+ L + D+ G FPH EN A A R
Sbjct: 496 LETQWGNVRPSWFLQHAAMALDELPRT-DVMIGSDKHRFPHLENLRAIWSTAGRE----- 549
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+ T+ E L + RL +L R+P+ +
Sbjct: 550 ----VQAWTACQQTSDAEGETLATVAETLGGFR---------AARLWLLSAAPRKPLCAS 596
Query: 324 VQRLTEAEILLSKWP-------------------QTSTSKGIIDPAVLSALYNDLNTVSA 364
L + + + A +A+ + L
Sbjct: 597 ADNLAMWARNWRRIQEGAVALTLALDARGDTVSTDVEQAVFDLKAAFRTAMDDGLKLHHF 656
Query: 365 IQALHKLARESTK-----------NHDLLPIFNASAHILGIEVCKEHL--NKNISIAIEK 411
AL + ++ + L A IL I + ++ + ++
Sbjct: 657 WPALFRFIKQVNQWAGDDRLTGAAARACLDELKAMDAILAILDPAQMPVPLSDLPVPVQG 716
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
LV +R + K F+ +D +R ++ + GF +ED
Sbjct: 717 LVADRQKAREAKDFALSDELRDKIAAAGFRVEDT 750
>gi|154312989|ref|XP_001555821.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
gi|150849581|gb|EDN24774.1| hypothetical protein BC1G_05496 [Botryotinia fuckeliana B05.10]
Length = 796
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 33/86 (38%), Positives = 56/86 (65%), Gaps = 2/86 (2%)
Query: 4 KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++K++N+L+ F I+ + YVCGPTVYD +H+G+AR + D++ R+++ Y
Sbjct: 3 QLKVHNSLKPGGPVPFVPIEKGKVSWYVCGPTVYDHSHLGHARNYVSTDIIRRIMKD-YF 61
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
+ +V NITD+DDKII +AR++
Sbjct: 62 GFDLNFVMNITDVDDKIILKARRQKL 87
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 102/369 (27%), Positives = 155/369 (42%), Gaps = 59/369 (15%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + +T QF++D L + P R T ++P++ ++ II G AYE
Sbjct: 201 IDAKDHTIFTNVTQYWEDQFMEDMDALNVMRPDVITRVTTYVPKIAIFVKKIIDKGFAYE 260
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------KKNPADFILWKRST 198
++ + FD ++ G+ R E + + E+ K+ DF LWK+S
Sbjct: 261 SDGSVYFDIAAFEKAGNPYARLRPESRNDKALQEEGEGSLSKNLGGKRGAGDFALWKKSK 320
Query: 199 PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD-- 256
EP W SPWG GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 321 AGEPSWPSPWGEGRPGWHIECSVMASDVLGSKMDIHSGGIDLAFPHHDNELAQSEAYFCE 380
Query: 257 ---RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N ++H G L++ G KMSKS NF TI + L T + +R+ LM
Sbjct: 381 HEQGPHEWVNYFLHMGHLSIAGSKMSKSLKNFQTIRDALTTD------YTPRSMRIVFLM 434
Query: 314 THYREPIDFTVQRLTEAEILLSK-----------------------------WPQTSTSK 344
+ + ++ + A+ + P+ T+
Sbjct: 435 GRWNDGVEISPDMRLMADAWEATVNNFFVNVKSHIIEGGNSTSIEDLKSLSIHPELQTAL 494
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLAREST----------KNHDLLPIFNASAHILGI 394
+ +AL +T A+ L +L +ES H L + ILGI
Sbjct: 495 DKAQTDLQTALTESFDTPKAMLILQELIKESNVHMGSHKSDLDIHGLEKVARWITKILGI 554
Query: 395 EVCKEHLNK 403
+ N
Sbjct: 555 FGLDANANA 563
>gi|328766817|gb|EGF76869.1| hypothetical protein BATDEDRAFT_92152 [Batrachochytrium
dendrobatidis JAM81]
Length = 755
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 39/122 (31%), Positives = 57/122 (46%), Gaps = 1/122 (0%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ I N+L RK F + Y CGPTVYD +H+G+AR FD++ R++ Y
Sbjct: 22 PRLYINNSLTRKKELFVPEKGRRVTWYSCGPTVYDKSHVGHARTFFSFDIVRRIM-SEYF 80
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ YV NITDIDDKII ARQ+H +A ++ +
Sbjct: 81 GYDLQYVMNITDIDDKIIVSARQKHLFAKYKEANPVLNESVIVKAELGWHYFVNQRFEKY 140
Query: 123 PR 124
+
Sbjct: 141 MK 142
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 117/442 (26%), Positives = 172/442 (38%), Gaps = 85/442 (19%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
QE + F D L P R + +IP++I +Q I+ +G+
Sbjct: 211 QEGAKTTDQQIFRDYAAYWEADFFHDMDSLNIRRPDVLTRVSEYIPEIIAFVQKIMSNGY 270
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK----------KNPADFILW 194
AYE + + FDT S KI+ G + + +N +DF LW
Sbjct: 271 AYEFDGSVYFDTVCFDRSDKHSYAKIEPWSAGNVKLVQEGEGDLTADTSGKRNISDFALW 330
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K S P EP W SPWG GRPGWHIECSAM+ LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 331 KSSKPGEPSWSSPWGEGRPGWHIECSAMAGCVLGEKIDIHSGGIDLTFPHHDNELAQSEG 390
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
+ N ++H G L++EG+KMSKS NFI+I E LE A IR+ L+
Sbjct: 391 HFGCTQWVNYFMHTGHLHIEGQKMSKSLKNFISIKEALEQST-------AQQIRIMYLLH 443
Query: 315 HYREPIDF--------------------------TVQRLTEAEILLSKWPQT-----STS 343
H+ +D+ ++ E I + +
Sbjct: 444 HWDSTLDWSAGSLSEARTIEVSINNFLALVKALAQEEKFKERVISETHNYGSAEKELMDV 503
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA---------------- 387
A+ +AL + NT A+ L +L S + + A
Sbjct: 504 LFQKQEAIYAALADSFNTPLAMTELRQLISVSNQYYQTKNKVKATPNITILAKIGVYVTK 563
Query: 388 SAHILGI---------EVCKEHLNKNISIAI---EKLVQERLILL---KMK----KF-SS 427
G+ E + + L R + + K +F
Sbjct: 564 LLRTFGVYPDINPEFGAPVTEGAQNSEEALMPYLRVLSSFRDAVRELAQAKADPVEFLKL 623
Query: 428 ADYIRK-QLESKGFILEDYKNP 448
+D +R L G IL+D ++
Sbjct: 624 SDRLRDMDLFELGVILDDKEDG 645
>gi|289811526|ref|ZP_06542155.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 70
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 36/72 (50%), Positives = 46/72 (63%), Gaps = 2/72 (2%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+KI+NTL R+ EF+ I + MYVCG TVYD HIG+ R + FDV+ R LR+
Sbjct: 1 MLKIFNTLTRQKEEFKPIHAGEVGMYVCGITVYDLCHIGHGRTFVAFDVVARYLRFLGY- 59
Query: 64 KCVTYVRNITDI 75
+ YVRNITDI
Sbjct: 60 -KLKYVRNITDI 70
>gi|225466980|ref|XP_002268953.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
gi|225468419|ref|XP_002263606.1| PREDICTED: hypothetical protein, partial [Vitis vinifera]
Length = 78
Score = 144 bits (362), Expect = 4e-32, Method: Composition-based stats.
Identities = 33/75 (44%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
++++YNT+ ++ + + + MYVCG T YD +H+G+ R + FDVLYR L++ E
Sbjct: 6 ELRVYNTMTQQKEILKPVVDGKVSMYVCGVTAYDLSHLGHGRAAVSFDVLYRYLQHLGYE 65
Query: 64 KCVTYVRNITDIDDK 78
VTYVRN TD+DDK
Sbjct: 66 --VTYVRNFTDVDDK 78
>gi|225683481|gb|EEH21765.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb03]
Length = 792
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y V ++ NITD+DDK
Sbjct: 83 YFNFDVQFIMNITDVDDK 100
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 51/346 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T +F+KD L L P R T ++P+++ ++ I+ H AY ++ + F
Sbjct: 224 FTKLTKTYEDRFMKDIRDLNVLDPDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYF 283
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++PADF LWK S EP W
Sbjct: 284 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWP 343
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 344 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHENSAQNHW 403
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 404 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WNPRSLRIVFLLGGWKDGIE 458
Query: 322 FTVQRLTEAEILLSKWPQTSTSK----------------------GIIDPAVLSALYNDL 359
T + K + AV L +
Sbjct: 459 ITEDLVKAGNAWEEKANNFFINARDSVAQANSDAGSTDDTLATALKSAQDAVYQNLCDSF 518
Query: 360 NTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
NT A+ A+ +L + ++ + + +I G+
Sbjct: 519 NTAGAMHAISELISKYNISNKSTLPVKDVQEAAVWVTSMVNIFGLN 564
>gi|295666742|ref|XP_002793921.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
gi|226277574|gb|EEH33140.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
Length = 820
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y V ++ NITD+DDK
Sbjct: 83 YFNFDVQFIMNITDVDDK 100
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 98/346 (28%), Positives = 153/346 (44%), Gaps = 51/346 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T +F+KD L L P R T ++P+++ ++ I+ H AY ++ + F
Sbjct: 262 FTKLTKTYEDRFMKDIRDLNVLDPDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYF 321
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++PADF LWK S EP W
Sbjct: 322 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWP 381
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS +
Sbjct: 382 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHENCAHDHW 441
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 442 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLGGWKDGIE 496
Query: 322 FTVQRLTEAEILLSKWPQTSTSK----------------------GIIDPAVLSALYNDL 359
T + K + AV L +
Sbjct: 497 ITEDLVKAGNAWEEKANNFFINARDSVAQTNSDAGSTDDTLATALKSAQDAVYQNLCDSF 556
Query: 360 NTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
NT A+ A+ +L + ++ + + +I G+
Sbjct: 557 NTAGAMYAISELISKYNISNKSTLPVKDVQEAAVWVTSMVNIFGLN 602
>gi|25808956|gb|AAN73970.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 81/222 (36%), Positives = 117/222 (52%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+A I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HASSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 113 YGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRCTFG 212
>gi|226287115|gb|EEH42628.1| cysteinyl-tRNA synthetase [Paracoccidioides brasiliensis Pb18]
Length = 830
Score = 143 bits (361), Expect = 5e-32, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 48/78 (61%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPSGRKVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y V ++ NITD+DDK
Sbjct: 83 YFNFDVQFIMNITDVDDK 100
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 98/346 (28%), Positives = 152/346 (43%), Gaps = 51/346 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T +F+KD L L P R T ++P+++ ++ I+ H AY ++ + F
Sbjct: 262 FTKLTKTYEDRFMKDIRDLNVLDPDAVTRVTEYMPEIVQFVERIVQHKFAYVTSDGSVYF 321
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++PADF LWK S EP W
Sbjct: 322 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALINRTTEKRSPADFALWKASKAGEPSWP 381
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 382 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHENCAQNHW 441
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 442 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLGGWKDGIE 496
Query: 322 FTVQRLTEAEILLSKWPQTSTSK----------------------GIIDPAVLSALYNDL 359
T + K + AV L +
Sbjct: 497 ITEDLVKAGNAWEEKANNFFINARDSVAQANSDAGSTDDTLATALKSAQDAVYQNLCDSF 556
Query: 360 NTVSAIQALHKLARESTKNH----------DLLPIFNASAHILGIE 395
NT A+ A+ +L + ++ + + +I G+
Sbjct: 557 NTAGAMHAISELISKYNISNKSTLPVKDVQEAAVWVTSMVNIFGLN 602
>gi|256272357|gb|EEU07340.1| YNL247W-like protein [Saccharomyces cerevisiae JAY291]
Length = 767
Score = 143 bits (361), Expect = 6e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 115/440 (26%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------------------- 350
+ +DF + E + + + +
Sbjct: 455 ASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLAD 514
Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAH 390
V SA ++L+T A++ L +L +S
Sbjct: 515 FVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKILR 574
Query: 391 ILGIEVCKEHL---------NKNISIAIEKLV-----------QERLILLKM---KKF-S 426
I+G ++L + ++ + ++ R + +K K+F
Sbjct: 575 IIGFPSRPDNLGWTAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQ 634
Query: 427 SADYIRKQ-LESKGFILEDY 445
D IR + L + L+D
Sbjct: 635 LTDKIRNEDLLNLNVALDDR 654
>gi|50304753|ref|XP_452332.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641465|emb|CAH01183.1| KLLA0C03025p [Kluyveromyces lactis]
Length = 766
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 38/83 (45%), Positives = 53/83 (63%), Gaps = 2/83 (2%)
Query: 5 IKIYNTLERKITEFQAI-DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YNTL R EF + + Y CGPTVYD +H+G+AR + D+ R+L+ Y
Sbjct: 41 LKLYNTLTRNKEEFVTHSNSKCVTWYSCGPTVYDASHMGHARNYVSIDINRRILQD-YFG 99
Query: 64 KCVTYVRNITDIDDKIIERARQE 86
+ +V+N+TDIDDKII RARQ
Sbjct: 100 YDINFVQNVTDIDDKIIIRARQN 122
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 114/442 (25%), Positives = 180/442 (40%), Gaps = 90/442 (20%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ D + + Q++ +D L L PT R + ++P+++ ++ II +G+AY
Sbjct: 223 GSTLNDPDIFRKLPAYWEQRYDQDMAALNVLPPTVTTRVSEYVPEIVQFVETIISNGYAY 282
Query: 147 -EANNEIIFDT-----SSIPNYGSFSRRKIDEQK-------MGTRVPEKYHKKNPADFIL 193
++ + FDT S Y + + K K++ DF L
Sbjct: 283 ATSDGSVYFDTAKFDSSEGHEYAKCQPWNKGQLDLIQDGEGSLSDFSAKNGKRSANDFAL 342
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W SPWG+GRPGWHIECS M+S G V DIH GG+DL FPHH+NE+AQS
Sbjct: 343 WKASKPGEPEWPSPWGKGRPGWHIECSVMASDIHGSVIDIHTGGIDLAFPHHDNELAQSE 402
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N ++H G L++EG+KMSKS NFITI E L + A +RLA
Sbjct: 403 ACYDNHQWINYFLHTGHLHIEGQKMSKSLKNFITIEEAL-------NKYSARQLRLAFAS 455
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV---------------------- 351
+ +DF L E + L S + + ++
Sbjct: 456 VQWNNQLDFKDSLLNEVKSLESSFTNFFKNIRALNNDYKHSLGLGKIVSKKLSNEEKALL 515
Query: 352 ----------LSALYNDLNTVSAIQALHKLARESTKNHD----------LLPIFNASAHI 391
++ ++L+T ++ L++L +S LL I + I
Sbjct: 516 NVLKSTQEKVHASFCDNLSTPQVLKHLNELLTKSNSYIANISSELKIEPLLAITRYISKI 575
Query: 392 LGIEVCKEHLNKN--------------ISIAIEK-----LVQERLILLK---MK----KF 425
LG+ + + I L R + + K +F
Sbjct: 576 LGVIGFQLRSDGLGWLDDSSSDSSPDVSKEDIALPYVRCLSYFRDEVRQLAMNKAPSSQF 635
Query: 426 SSA-DYIRK-QLESKGFILEDY 445
A D +R +L + ++D
Sbjct: 636 LQATDRLRDEELVALNVAVDDR 657
>gi|6324082|ref|NP_014152.1| hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
gi|1730840|sp|P53852|SYC_YEAST RecName: Full=Cysteinyl-tRNA synthetase; AltName:
Full=Cysteine--tRNA ligase; Short=CysRS
gi|1255971|emb|CAA65497.1| unnamed protein product [Saccharomyces cerevisiae]
gi|1302287|emb|CAA96154.1| unnamed protein product [Saccharomyces cerevisiae]
gi|285814418|tpg|DAA10312.1| TPA: hypothetical protein YNL247W [Saccharomyces cerevisiae S288c]
Length = 767
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 115/440 (26%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------------------- 350
+ +DF + E + + + +
Sbjct: 455 ASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLAD 514
Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAH 390
V SA ++L+T A++ L +L +S
Sbjct: 515 FVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKILR 574
Query: 391 ILGIEVCKEHL---------NKNISIAIEKLV-----------QERLILLKM---KKF-S 426
I+G ++L + ++ + ++ R + +K K+F
Sbjct: 575 IIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQ 634
Query: 427 SADYIRKQ-LESKGFILEDY 445
D IR + L + L+D
Sbjct: 635 LTDKIRNEDLLNLNVALDDR 654
>gi|323335869|gb|EGA77147.1| YNL247W-like protein [Saccharomyces cerevisiae Vin13]
Length = 767
Score = 143 bits (360), Expect = 6e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRXVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 115/440 (26%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------------------- 350
+ +DF + E + + + +
Sbjct: 455 ASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLAD 514
Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAH 390
V SA ++L+T A++ L +L +S
Sbjct: 515 FVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKILR 574
Query: 391 ILGIEVCKEHL---------NKNISIAIEKLV-----------QERLILLKM---KKF-S 426
I+G ++L + ++ + ++ R + +K K+F
Sbjct: 575 IIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQ 634
Query: 427 SADYIRKQ-LESKGFILEDY 445
D IR + L + L+D
Sbjct: 635 LTDKIRNEDLLNLNVALDDR 654
>gi|151944300|gb|EDN62578.1| conserved protein [Saccharomyces cerevisiae YJM789]
Length = 767
Score = 143 bits (360), Expect = 7e-32, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 36 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 94
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 95 YDVQFVQNVTDIDDKIILRARQNYL 119
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 115/440 (26%), Positives = 182/440 (41%), Gaps = 85/440 (19%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + Q+F D L L PT R + ++P++I +Q II +G
Sbjct: 222 KELGSTISNPEIFRQLPAYWEQKFNDDMLSLNVLPPTVTTRVSEYVPEIIDFVQKIIDNG 281
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY ++ + FDT S +Y I++ + KK+ DF
Sbjct: 282 YAYATSDGSVYFDTLKFDKSPNHDYAKCQPWNKGQLDLINDGEGSLSNFADNGKKSNNDF 341
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S EP WESPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 342 ALWKASKAGEPEWESPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 401
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 402 SEARFDNQQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------KKFSPRQLRLAF 454
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA--------------------- 350
+ +DF + E + + + +
Sbjct: 455 ASVQWNNQLDFKESLIHEVKSFENSMNNFFKTIRALKNDAASAGHISKKFSPLEKELLAD 514
Query: 351 -------VLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNASAH 390
V SA ++L+T A++ L +L +S
Sbjct: 515 FVESESKVHSAFCDNLSTPVALKTLSELVTKSNTYITTAGAALKIEPLIAICSYITKILR 574
Query: 391 ILGIEVCKEHL---------NKNISIAIEKLV-----------QERLILLKM---KKF-S 426
I+G ++L + ++ + ++ R + +K K+F
Sbjct: 575 IIGFPSRPDNLGWAAQAGSNDGSLGSLEDTVMPYVKCLSTFRDDVRSLAIKKAEPKEFLQ 634
Query: 427 SADYIRKQ-LESKGFILEDY 445
D IR + L + L+D
Sbjct: 635 LTDKIRNEDLLNLNVALDDR 654
>gi|303286934|ref|XP_003062756.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455392|gb|EEH52695.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 724
Score = 142 bits (359), Expect = 8e-32, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 55/94 (58%), Gaps = 1/94 (1%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
++ NT + T F +D + + Y+CGPTVYD AH+G+AR + FDVL R++ Y
Sbjct: 11 RLMNTFTKTKTPFVPLDGNRVGWYICGPTVYDSAHMGHARNYVNFDVLRRVVT-EYFRYD 69
Query: 66 VTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
V +V N+TDIDDKI+ RA Q + A +
Sbjct: 70 VRFVMNVTDIDDKIVMRAHQRRSEEVLALAEKTL 103
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 118/480 (24%), Positives = 194/480 (40%), Gaps = 113/480 (23%)
Query: 80 IERARQEHPS--------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+AR+ S I DA + + +F+ D L + P R + ++ +
Sbjct: 143 NAKARESDSSSGPVVDESWSIQDAYLTLAKRFEDEFMGDMASLNVMRPDALTRVSEYVDK 202
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK---- 182
++ IQ I+ G AYE+N + FD + Y ++ + E ++ + +
Sbjct: 203 IVSYIQRIVDRGFAYESNGSVYFDVPTFEKDANHKYAKLNKAALAEDEVEAAMDGEGALA 262
Query: 183 ---YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
KK+ DF+LWK S P EP W SPWG GRPGWHIECSAM S LG+ DI+GGG+D
Sbjct: 263 ADASEKKDAHDFVLWKASKPGEPSWASPWGEGRPGWHIECSAMCSDVLGEAVDINGGGID 322
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHHEN++AQS +++ N ++H+G L+++G KMSKS NFITI L
Sbjct: 323 LNFPHHENQLAQSEAFYDVKQWVNYFVHSGHLHIDGLKMSKSLKNFITIRAAL------- 375
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTV------------QRLTEAEILLSKWPQTSTSKGII 347
+ + A +R L+ + +P+D T ++ K ++ G
Sbjct: 376 KMYTARQLRFLFLLHQWSDPMDLTPAFGDAMDAAVIAEKTFAEFFHAVKGVLRNSGPGGY 435
Query: 348 DPAVLSALY----------------------NDLNTVSAIQALHKLARESTKN------H 379
D +++NT + I+AL +L +
Sbjct: 436 DANRAQTWNENERALSDAVDVARAATHAAMIDNVNTPAVIKALKELVSATNAYLGKTAKE 495
Query: 380 DLLPIFNASAH-----ILGIE---------------------------VCKEHLNKNISI 407
D+ P+ ++A IL + ++
Sbjct: 496 DVRPLIVSAAAQFVTTILSTLGVAEAGGGGAVGFGDVGGDAGGGDGDAGAGAGKEETLAP 555
Query: 408 AIEKLVQERLILLK-MK---K----FSSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
A++ +V+ R + K ++ D +R L + G L+D + WK
Sbjct: 556 ALDLIVKFRDEIRALAKSGADASALMAACDALRDDGLPTLGVKLDDRADG-----GALWK 610
>gi|25808800|gb|AAN73892.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 142 bits (359), Expect = 9e-32, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 119/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++S G+GRPGWHIECS
Sbjct: 113 YGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRCTFG 212
>gi|239612172|gb|EEQ89159.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 801
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y + V ++ NITD+DDK
Sbjct: 83 YFKFDVKFIMNITDVDDK 100
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 147/356 (41%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ + K +F++D L L P R T ++P+++ ++ II H Y ++ + F
Sbjct: 232 FTKLAKKYETRFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYF 291
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++ ADF LWK S EP W
Sbjct: 292 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWP 351
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 352 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHW 411
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 412 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLGGWKDGIE 466
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------------------LSALYNDL 359
T + K +L +
Sbjct: 467 ITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPGSKENTFAVALKSAQDAVHQSLCDSF 526
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + +I G+ I
Sbjct: 527 NTAGAMYAISELISKYNIADKSTLAIKDVQEAATWVTSMVNIFGLNGSASPTTSEI 582
>gi|261202288|ref|XP_002628358.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239590455|gb|EEQ73036.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
Length = 801
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPSGRTVTWYACGPTVYDDAHLGHARNYVSNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y + V ++ NITD+DDK
Sbjct: 83 YFKFDVKFIMNITDVDDK 100
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 95/356 (26%), Positives = 147/356 (41%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ + K +F++D L L P R T ++P+++ ++ II H Y ++ + F
Sbjct: 232 FTKLAKKYEARFMQDVRDLNVLDPDAITRVTEYMPEIVSFVERIIDHKFGYVTSDGSVYF 291
Query: 155 DTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ + + K+ + G + K++ ADF LWK S EP W
Sbjct: 292 DITAFEASGNSYARLEPWNRNDTKLQAEGEGALTKKTTEKRSAADFALWKASKAGEPSWP 351
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 352 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCADHHW 411
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L+ +++ I+
Sbjct: 412 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLGGWKDGIE 466
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAV----------------------LSALYNDL 359
T + K +L +
Sbjct: 467 ITEDLVKAGNAWEEKTNNFFIKAKDAVAQQDVTPGSKENTFAVALKSAQDAVHQSLCDSF 526
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + +I G+ I
Sbjct: 527 NTAGAMYAISELISKYNIADKSTLAIKDVQEAATWVTSMVNIFGLNGSASPTTSEI 582
>gi|322706523|gb|EFY98103.1| cysteinyl-tRNA synthetase [Metarhizium anisopliae ARSEF 23]
Length = 799
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 34/86 (39%), Positives = 55/86 (63%), Gaps = 2/86 (2%)
Query: 2 KKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
IK++N+L+ F ++P + Y CGPTVYD +H+G+AR + D++ R++ +
Sbjct: 1 MNSIKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVTSDIIRRIMMH- 59
Query: 61 YGEKCVTYVRNITDIDDKIIERARQE 86
Y V YV N+TD+DDKII +AR++
Sbjct: 60 YFGFNVKYVMNMTDVDDKIIIKARRQ 85
Score = 124 bits (312), Expect = 2e-26, Method: Composition-based stats.
Identities = 103/389 (26%), Positives = 159/389 (40%), Gaps = 69/389 (17%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F++D L L P R T ++PQ+ ++ I+ G
Sbjct: 198 KETMDTSDQSIFTDLTKRMEAVFLEDMDNLNVLRPDVITRVTEYVPQIAKFVEQIVDKGF 257
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA + FD ++ S + + + E+ G+ K+ DF LWK
Sbjct: 258 AYEAEGSVYFDIAAFQKAGNTYARLRPDSKNNKALQEEGEGSLSTNLGGKRGAGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W S WG GRPGWHIECS M+S LG D+H GG+DL FPHH+NE+AQS
Sbjct: 318 KSKAGEPYWPSKWGDGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAY 377
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI + L T ++ A +R+
Sbjct: 378 FCQHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIADALAT------TYTARSMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
LM + + ++ + + A+ + T+
Sbjct: 432 FLMGRWNDGVEISPDMRSTADNWETTISNFFTNTKSWIREAGVGGGVRSLSINQDTPATG 491
Query: 344 ----KGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FNA 387
+ V +AL N +T A+ AL KL K+ DL +
Sbjct: 492 LLADLELAKKEVEAALTNSFDTPRAMLALLKLVNNVNTFVMNNKDVDLAHVEAIARWITK 551
Query: 388 SAHILGIEVCK------EHLNKNISIAIE 410
I G++ +I+ I+
Sbjct: 552 MVGIFGLDPNAIPPYDGLGWASSIAADID 580
>gi|322694236|gb|EFY86071.1| cysteinyl-tRNA synthetase [Metarhizium acridum CQMa 102]
Length = 799
Score = 142 bits (358), Expect = 1e-31, Method: Composition-based stats.
Identities = 33/84 (39%), Positives = 55/84 (65%), Gaps = 2/84 (2%)
Query: 4 KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+K++N+L+ F ++P + Y CGPTVYD +H+G+AR + D++ R++ + Y
Sbjct: 3 SLKVHNSLKPGPPVPFVPMEPGKVSWYACGPTVYDKSHLGHARNYVASDIIRRIMMH-YF 61
Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
V YV N+TD+DDKII +AR++
Sbjct: 62 GFNVKYVMNMTDVDDKIIIKARRQ 85
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 99/368 (26%), Positives = 155/368 (42%), Gaps = 63/368 (17%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F++D L L P R T ++PQ+ ++ I+ G
Sbjct: 198 KETIDTSDQSIFTDLTKRMEAVFLEDMDNLNVLRPDVITRVTEYMPQIAKFVEQIVDKGF 257
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA + FD ++ S + + + E+ G+ K+ DF LWK
Sbjct: 258 AYEAEGSVYFDIAAFQKAGNTYARLRPDSKNDKALQEEGEGSLSTNLGGKRGAGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W S WG GRPGWHIECS M+S LG D+H GG+DL FPHH+NE+AQS
Sbjct: 318 KSKAGEPYWPSKWGDGRPGWHIECSVMASDVLGSRMDVHSGGVDLAFPHHDNELAQSEAY 377
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI++ L T ++ A +R+
Sbjct: 378 FCQHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTISDALAT------TYTARSMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------------------------- 344
LM + + ++ + ++A+ + T+
Sbjct: 432 FLMGRWNDGVEISPDMRSKADNWETTISNFFTNAKSWIREAGVGGGVKSLSINQDTPATG 491
Query: 345 -----GIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FNA 387
+ V +AL N +T A+ L KL K+ DL +
Sbjct: 492 LLADLELAKKEVEAALTNSFDTPRAMLVLLKLVNTVNTFVMNNKDVDLAHVEAIARWITK 551
Query: 388 SAHILGIE 395
+ G++
Sbjct: 552 MVGVFGLD 559
>gi|225557189|gb|EEH05476.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus G186AR]
Length = 806
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y + V ++ NITD+DDK
Sbjct: 83 YFKFDVEFIMNITDVDDK 100
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 97/356 (27%), Positives = 151/356 (42%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T K +F++D L L P R T ++P+++ ++ I+ H Y ++ + F
Sbjct: 237 FTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYF 296
Query: 155 DTSSIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ K+ + G + K++ ADF LWK S EP W
Sbjct: 297 DITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWP 356
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS
Sbjct: 357 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHGHW 416
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L++ +++ I+
Sbjct: 417 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLSAWKDGIE 471
Query: 322 FTVQRLTEAEILLSKWPQTSTS----------------------KGIIDPAVLSALYNDL 359
T + K AV +L +
Sbjct: 472 ITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPGSADNTLAVALESAQDAVHQSLCDSF 531
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + ++ G+ I
Sbjct: 532 NTAGAMYAISELISKYNIADKSTIPTKHIQEAAMWVTSMVNVFGLNGSAPPTPTEI 587
>gi|325093822|gb|EGC47132.1| cysteinyl-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 806
Score = 142 bits (357), Expect = 1e-31, Method: Composition-based stats.
Identities = 35/78 (44%), Positives = 49/78 (62%), Gaps = 3/78 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+KIYN+L R F +DP + Y CGPTVYD AH+G+AR + D+L R++R
Sbjct: 24 PPLKIYNSLTRSKVPFVPLDPIGRKVTWYACGPTVYDDAHLGHARNYVTNDILRRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDK 78
Y + V ++ NITD+DDK
Sbjct: 83 YFKFDVEFIMNITDVDDK 100
Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats.
Identities = 97/356 (27%), Positives = 153/356 (42%), Gaps = 51/356 (14%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ +T K +F++D L L P R T ++P+++ ++ I+ H Y ++ + F
Sbjct: 237 FTKLTKKYEDRFMQDVRDLNVLDPDTVTRVTEYMPEIVSFVERIVKHKFGYVTSDGSVYF 296
Query: 155 DTSSIPNYGS---------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ K+ + G + K++ ADF LWK S EP W
Sbjct: 297 DITAFEAAGNSYARLEPWNRHDTKLHAEGEGALTKKTMEKRSAADFALWKASKAGEPSWP 356
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS +
Sbjct: 357 SPWGDGRPGWHIECSAMASAKLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHETCAHDHW 416
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E L+ W +R+ L++ +++ I+
Sbjct: 417 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALDKGD-----WTPRSLRIVFLLSAWKDGIE 471
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGII----------------------DPAVLSALYNDL 359
T + K + AV +L +
Sbjct: 472 ITEDLINAGNAWEEKVNNFFIKSRDVVGQPDVAPGSADNTLAVALKSAQDAVHQSLCDSF 531
Query: 360 NTVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI 405
NT A+ A+ +L + + + ++ G+ I
Sbjct: 532 NTAGAMYAISELISKYNIADKSTIPTKHIQEAAMWVTSMVNVFGLNGSAPPTPTEI 587
>gi|320165586|gb|EFW42485.1| cysteinyl-tRNA synthetase [Capsaspora owczarzaki ATCC 30864]
Length = 727
Score = 142 bits (357), Expect = 2e-31, Method: Composition-based stats.
Identities = 118/441 (26%), Positives = 180/441 (40%), Gaps = 81/441 (18%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S+ + +QF D L L P R +++I ++I ++ +I +G+AY
Sbjct: 184 GASVTDPAIFAKTARYWEEQFNIDMKALHILEPDRLTRVSDYIDEIIEFVEKVIGNGYAY 243
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------------HKKNPADFILW 194
+N + F T+S K+ + +G KK+P DF LW
Sbjct: 244 ASNGSVYFSTTSFDQNKGHHYAKLVPEAVGNAASLAEGEGELSATDAGSDKKHPNDFALW 303
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
K+S EP W+SPWG+GRPGWHIECSAM+ +G DIHGGG+DL FPHH+NEIAQS
Sbjct: 304 KKSKAGEPAWDSPWGKGRPGWHIECSAMAGKVIGSTLDIHGGGIDLKFPHHDNEIAQSEA 363
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++ N ++H G L +EGRKMSKS NFITI E LE + A IR+ L+
Sbjct: 364 FFDNKQWINYFMHTGHLAIEGRKMSKSLKNFITIREALEA-------YTARQIRIMFLLH 416
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-----------------------DPAV 351
+ + +D++ +TEA + + + + A+
Sbjct: 417 AWNKGLDYSKSTMTEAISVEKSFNEFFLNIKAALQSAPANKFVAADEALEAKLRATKQAI 476
Query: 352 LSALYNDLNTVSAIQALHKLARESTKNHD------LLPIFNASAH-------ILGIEVCK 398
A N +NT + L L + + I + ++G+
Sbjct: 477 HEAFLNSINTPAVFGHLQDLVSATNTYLNTPGNVPKSNILRGVGNFATWILSVVGVIPNG 536
Query: 399 EHLN--------KNISIAIEKL-----VQE-----RLILLKMKKFSSA-----DYIRKQ- 434
S I L + R K ++A D +R +
Sbjct: 537 RAGEIGFPIGGADGASADIVLLPAAKTIAAFRDVVRKEARASK--ATALLQACDALRDET 594
Query: 435 LESKGFILEDYKNPDNGQRMT 455
L G LED + D ++
Sbjct: 595 LPQLGIRLEDVEGGDAVVKIV 615
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 36/84 (42%), Positives = 57/84 (67%), Gaps = 1/84 (1%)
Query: 5 IKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
++++N+L R++ EF + + + Y+CGPTVYD +H+G+A I FDV+ R+L Y+
Sbjct: 22 LRLHNSLTREVDEFIPANGNTVNAYICGPTVYDASHMGHASTYIQFDVIRRVLADYFHYD 81
Query: 65 CVTYVRNITDIDDKIIERARQEHP 88
+V NITD+DDKII +AR+ H
Sbjct: 82 M-RWVMNITDVDDKIILKARRNHL 104
>gi|25808908|gb|AAN73946.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 213
Score = 141 bits (356), Expect = 2e-31, Method: Composition-based stats.
Identities = 80/222 (36%), Positives = 118/222 (53%), Gaps = 17/222 (7%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSK 102
+AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 1 HARSAIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSI 52
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 53 YIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKD 112
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S + + ++ K+ DF+LWK + G++S G+GRPGWHIECS
Sbjct: 113 YGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSHLGKGRPGWHIECS 170
Query: 221 AM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 171 SMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRCTFG 212
>gi|30961753|gb|AAP39993.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
gi|30961755|gb|AAP39994.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
Length = 219
Score = 141 bits (355), Expect = 3e-31, Method: Composition-based stats.
Identities = 83/223 (37%), Positives = 119/223 (53%), Gaps = 17/223 (7%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
AR I FD+L R L E V VRN TDIDDKII +A +E N +I ++S
Sbjct: 2 ARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSSIY 53
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNY 162
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +Y
Sbjct: 54 IESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDY 113
Query: 163 GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSA 221
GS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS+
Sbjct: 114 GSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSS 171
Query: 222 MSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
M DIH GG+DL+FPHHENE Q+ A +E
Sbjct: 172 MVFKTLALANTPYQIDIHAGGMDLLFPHHENEACQTRWAFGVE 214
>gi|190409217|gb|EDV12482.1| hypothetical protein SCRG_03371 [Saccharomyces cerevisiae RM11-1a]
Length = 123
Score = 140 bits (354), Expect = 3e-31, Method: Composition-based stats.
Identities = 37/85 (43%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R EF + + Y CGPTVYD +H+G+AR + D+ R+++ Y
Sbjct: 23 LKLYNSLTRSKVEFIPQSGNRGVTWYSCGPTVYDASHMGHARNYVSIDINRRIIQD-YFG 81
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
V +V+N+TDIDDKII RARQ +
Sbjct: 82 YDVQFVQNVTDIDDKIILRARQNYL 106
>gi|171690590|ref|XP_001910220.1| hypothetical protein [Podospora anserina S mat+]
gi|170945243|emb|CAP71354.1| unnamed protein product [Podospora anserina S mat+]
Length = 780
Score = 140 bits (353), Expect = 4e-31, Method: Composition-based stats.
Identities = 38/86 (44%), Positives = 56/86 (65%), Gaps = 3/86 (3%)
Query: 5 IKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+KIYN+L R +F +DP + Y CGPTVY+ AH+G+A+ + D++ R++R Y
Sbjct: 14 LKIYNSLTRTKNDFIPVDPTGEVVTWYACGPTVYEDAHLGHAKNYVSTDIIRRIMRD-YF 72
Query: 63 EKCVTYVRNITDIDDKIIERARQEHP 88
V +V N TDIDDKII +AR++H
Sbjct: 73 GFRVKFVMNTTDIDDKIILQARRQHL 98
Score = 116 bits (290), Expect = 9e-24, Method: Composition-based stats.
Identities = 96/362 (26%), Positives = 151/362 (41%), Gaps = 53/362 (14%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ ++ K ++F +D L L P R T ++ Q++ ++ I+ +G Y
Sbjct: 211 IDSNNHQIYLELSQKFERRFFEDMDALNVLPPDQLTRVTEYVRQIVDFVEKIVANGFGYA 270
Query: 147 EANNEIIFDTSSI----PNYGSFSRRKIDEQK-----MGTRVPEKYHKKNPADFILWKRS 197
+ + FD S +Y ++ G+ K++P F LWK S
Sbjct: 271 TPDGSVYFDIDSFEKAGHSYSRLEPWNKNDPALLADGEGSLSKGASMKRSPNHFALWKAS 330
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W+SPWGRGRPGWHIECSAM+S +GK DIH GG+DL FPHH+NE+AQS A
Sbjct: 331 KPGEPAWDSPWGRGRPGWHIECSAMASEAIGKTMDIHSGGVDLRFPHHDNELAQSE-AYW 389
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
++ N F+++ +SKS N+ TI +L + W A +R+ L+ ++
Sbjct: 390 STPDCHVQWANYFIHMGQ--LSKSLKNYTTIRSVLSE-----KDWTARSLRICFLLMPWQ 442
Query: 318 EPIDFTVQRLTEAEILLSKW---------------------------PQTSTSKGIIDPA 350
+ I+ T + + K Q S
Sbjct: 443 DGIEVTDELMKAVIGWEGKLNNFLLKSLDLSKHTRPNAEGQDIGVADQQLLKSLEKAKAD 502
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLL-PIFNASAH-------ILGIEVCKEHLN 402
V +AL + N S ++ L L E+ L + A I G++ + N
Sbjct: 503 VDNALCDSFNISSVMRILSDLVTEANSAEKLADETVLSLARWVTRIVTIFGLDPEGDLTN 562
Query: 403 KN 404
Sbjct: 563 SE 564
>gi|25808866|gb|AAN73925.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 209
Score = 140 bits (353), Expect = 5e-31, Method: Composition-based stats.
Identities = 81/218 (37%), Positives = 115/218 (52%), Gaps = 17/218 (7%)
Query: 47 MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
I FD+L R L E V VRN TDIDDKII +A +E N +I ++S +
Sbjct: 1 AIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIES 52
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSF 165
+ +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS
Sbjct: 53 YTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSL 112
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-- 222
S R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 113 SVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVF 170
Query: 223 ---SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+ DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 ETLALANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 208
>gi|114635648|ref|XP_001155769.1| PREDICTED: cysteinyl-tRNA synthetase isoform 1 [Pan troglodytes]
Length = 656
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 111 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 170
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 171 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 230
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 231 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 290
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 291 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 343
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 344 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 403
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 404 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 463
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 464 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 523
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 524 ALRDDILPELGVRFEDHEG 542
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 15/25 (60%), Positives = 17/25 (68%)
Query: 70 RNITDIDDKIIERARQEHPSIPIND 94
NITDIDDKII+RARQ H +
Sbjct: 1 MNITDIDDKIIKRARQNHLFEQYRE 25
>gi|25808926|gb|AAN73955.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 209
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 80/218 (36%), Positives = 117/218 (53%), Gaps = 17/218 (7%)
Query: 47 MIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQ 106
I FD+L R L E V VRN TDIDDKII +A +E N +I ++S +
Sbjct: 1 AIAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIES 52
Query: 107 FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSF 165
+ +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS
Sbjct: 53 YTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSL 112
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-- 222
S + + ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 113 SVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVF 170
Query: 223 ---SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
+ DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 ETLALANAPYQIDIHAGGSDLLFPHHENEACQTRCAFG 208
>gi|20988543|gb|AAH30473.1| Cars protein [Mus musculus]
Length = 671
Score = 140 bits (352), Expect = 6e-31, Method: Composition-based stats.
Identities = 114/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 126 GSEVTDNSIFSKLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 185
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 186 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 245
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 246 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 305
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 306 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 358
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAV----------- 351
+++ +D+ ++ L K G +
Sbjct: 359 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 418
Query: 352 ------LSALYNDLNTVSAIQALHKLARESTKNHDLLPI----------------FNASA 389
AL ++++T + ++ + L +
Sbjct: 419 GKKTAVHEALCDNIDTRTVMEEMRALVSQCNLYMAARKAERRRPNRALLENIAMYLTHML 478
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMKKFS---SAD 429
I LG V N N+ + + L + R I + K +D
Sbjct: 479 KIFGAIEEESPLGFPVGGPGTNLNLESTVMPYLQVLSEFREGVRKIAREKKVLEVLQLSD 538
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 539 ALRDDILPELGVRFEDHEG 557
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 18/37 (48%), Positives = 21/37 (56%)
Query: 58 RYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
R Y + V Y NITDIDDKII RARQ + +
Sbjct: 4 RRDYFQYDVFYCMNITDIDDKIIRRARQNYLFEQYRE 40
>gi|242280324|ref|YP_002992453.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
gi|242123218|gb|ACS80914.1| cysteine synthase [Desulfovibrio salexigens DSM 2638]
Length = 764
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 100/488 (20%), Positives = 175/488 (35%), Gaps = 68/488 (13%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPT---VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
KI++ +I + ++ GP+ YD + R +++ DVL R L
Sbjct: 305 KIFDQSSGADRVL-SISEAETGLFTMGPSFDNPYD-PEV--FRRIVLLDVLARHLEREG- 359
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V+ + + D++D+ + +R+ + K L
Sbjct: 360 -AKVSALVGLADLEDQTLAASRERGVDRETFSTEIATAVR------KAAYLLGVRKSMRF 412
Query: 123 PRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
RA+ + + + L + ++ HG AYE + FD S YG S ID+ +G V
Sbjct: 413 ERASESVDRTVELCRALLAHGLAYEKLRSVYFDISRDKGYGQMSNMDIDKVSLGKTVDMD 472
Query: 183 YH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
+ K+NP DF L KR+T + E+ WG RP W ++ + + L V + G
Sbjct: 473 DYVKENPRDFTLLKRATLQDLKLGDIIETEWGNVRPSWFMQQAVTALEGLPGVSLVLAGE 532
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
+ FPH EN A A W+ + G + ++ELLE
Sbjct: 533 IH-RFPHLENLRAIWAGA---RVAPQAWMVAQPVLPGGPVLPC-------VDELLEQSGQ 581
Query: 298 GGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ-----------TSTSKGI 346
+R+ ML + Y++P+ + Q ++ K +
Sbjct: 582 ------PIAVRMWMLSSSYKKPLVCSEQSISMWVKNQQKLQDLAAGLSIHAGDSGQLSED 635
Query: 347 IDPAVL-------SALYNDLNTVSAIQALHKLARESTK-----------NHDLLPIFNAS 388
ID V AL ++L L + L
Sbjct: 636 IDQEVFTLKSGLSQALNDNLMLHRFWPILFSFTKTINSLLGSGKLSAKEAKFCLDQLLEV 695
Query: 389 AHILGIEVCKEHLNK--NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
ILGI + ++ ++L+++R + K F++AD +R +L GF +ED
Sbjct: 696 DDILGILDHEAMPVPFVSLPEEAKELLEQRELARANKDFTTADGLRDKLLKLGFNVEDSS 755
Query: 447 NPDNGQRM 454
R+
Sbjct: 756 EGARVFRV 763
>gi|168008202|ref|XP_001756796.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162692034|gb|EDQ78393.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 811
Score = 139 bits (351), Expect = 8e-31, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 56/88 (63%), Gaps = 2/88 (2%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
K+ + + N+L ++ F D S + Y+CGPTVYD +H+G+AR + FD++ R+L
Sbjct: 13 KRGLMVNNSLCKEKVPFFTKDGSRNVTWYICGPTVYDSSHVGHARNYVTFDIIRRILED- 71
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y V YV N+TD+DDKII RAR+ +
Sbjct: 72 YFHYNVKYVMNVTDVDDKIINRARRNYL 99
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 101/353 (28%), Positives = 155/353 (43%), Gaps = 17/353 (4%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ ++ + T K +F D T L C P R T ++ ++I ++ ++ +
Sbjct: 206 ARLGATVTDHAIYKSHTLKYENEFWDDMTALGCGYPDVLVRVTEYMDKIIEYVEVVLANK 265
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRR-------KIDEQKMGTRVPEKYHKKNPADFILWKR 196
AY AN + FDT + G + E K+ DF LWK+
Sbjct: 266 FAYVANGSVYFDTKAFREAGHQYGKLNPAAVGSSLLASESESNFETSEKRTSCDFALWKK 325
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
S P EP WESPWG GRPGWHIECSAM+S LG DIH GG DL FPHH+NE+AQS
Sbjct: 326 SKPGEPAWESPWGLGRPGWHIECSAMASDILGDNMDIHSGGHDLQFPHHDNELAQSEAYF 385
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
+ + H+G L+++G KMSKS NFITI E L + A +R+ ++ +
Sbjct: 386 HCHEWVRYFFHSGHLSIDGLKMSKSLKNFITIKEALT-------KYTARQLRMLFVIQSW 438
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARES 375
+ I+F+ + EA ++ + + AL + K L ES
Sbjct: 439 DKSINFSTTVVNEALQKEKQFKNFFANVESYLRQHVRALPGSAELDFLLSLSRKTLVTES 498
Query: 376 TKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
+ + + + + GI+ + + S + + R F +A
Sbjct: 499 LCFYVVGYLLWHALPMAGIQRPGDDEKQLFSRVDQAQIMVRE--RLEDNFDTA 549
>gi|297687912|ref|XP_002821443.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic-like isoform 6
[Pongo abelii]
Length = 662
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 110/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +Q K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQNALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I LG V + ++ + +Q R I + K +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGSSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDDILPELGVRFEDHEG 570
Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H +
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE 53
>gi|114635644|ref|XP_508228.2| PREDICTED: cysteinyl-tRNA synthetase isoform 9 [Pan troglodytes]
gi|114635646|ref|XP_001156007.1| PREDICTED: cysteinyl-tRNA synthetase isoform 5 [Pan troglodytes]
Length = 684
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I LG V + ++ + +Q R I + K +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDDILPELGVRFEDHEG 570
Score = 92.8 bits (229), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H +
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE 53
>gi|167526279|ref|XP_001747473.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773919|gb|EDQ87553.1| predicted protein [Monosiga brevicollis MX1]
Length = 531
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 99/331 (29%), Positives = 151/331 (45%), Gaps = 43/331 (12%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+Q ++ + + +T ++ D L PT R T ++ +++ I+ II +G
Sbjct: 107 KQHGSTVEDHAIFARLTQHWEAEYFADMAALNVRPPTVLTRVTEYVEEIVTFIEQIISNG 166
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP----------EKYHKKNPADFIL 193
+AY +N + FD+ + K+ + K++P DF L
Sbjct: 167 YAYASNGSVYFDSPRYAASDAHDYPKLVPEASQDVASLADAEGSLSSSDNEKRSPYDFAL 226
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W+SPWG+GRPGWHIECSAM G DIH GG+DL FPHH+NEIAQS
Sbjct: 227 WKASKPGEPAWDSPWGKGRPGWHIECSAMCHAAFGDKIDIHSGGIDLCFPHHDNEIAQSE 286
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N + H+G L +EG KMSKS NFITI + L + A IRL L
Sbjct: 287 AFYDQGQWCNYFCHSGHLTIEGLKMSKSLKNFITIKDAL-------KKHNATQIRLTFLT 339
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+ +D++ + EA +L ++ + + +
Sbjct: 340 HGWNSTLDYSEAGMVEATVLEKQFKEFFYTVNALVRRDEGQPFRDMTENDKGLLQTFGVH 399
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ AL ++ +T +AI A+ L E+ K
Sbjct: 400 RQRLHEALCDNFDTATAIAAMRSLMTEANKY 430
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 17/28 (60%), Positives = 20/28 (71%)
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y V +V NITDIDDKII RARQ++
Sbjct: 4 YFGYDVKFVMNITDIDDKIIVRARQQYL 31
>gi|170694948|ref|ZP_02886097.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
gi|170140046|gb|EDT08225.1| Cysteine--tRNA ligase [Burkholderia graminis C4D1M]
Length = 206
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 53/217 (24%), Positives = 88/217 (40%), Gaps = 35/217 (16%)
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+HNG++ ++ KMSKS NF TI E+L + A V+R + HYR P++++
Sbjct: 1 MHNGYVQIDNEKMSKSLNNFFTIREVLA-------QYDAEVVRFFIARAHYRSPLNYSDV 53
Query: 326 RLTEAEILLSKWPQTS----------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
+ +A L + +A+ +D NT A+ L +LA E
Sbjct: 54 HIDDARNALGRLYTALKDVTPDGAALDWNEAHAQRFQAAMNDDFNTPVAVSVLFELATEV 113
Query: 376 TKNHD--LLPIFNASAHILGIEVCKEHL-----------NKNISIAIEKLVQERLILLKM 422
+ D L + +LG+ + AIE + ER+ +
Sbjct: 114 NRTRDPALARQLRSLGAVLGLLGREPRAYLQQAAGAAVEGALEPAAIEAKIAERVAAKQA 173
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K +++AD IR +L G LED T W++
Sbjct: 174 KDYAAADRIRAELLEAGVALEDKPGGL-----TEWRR 205
>gi|332835587|ref|XP_003312913.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Pan troglodytes]
Length = 662
Score = 139 bits (349), Expect = 1e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNQALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I LG V + ++ + +Q R I + K +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDDILPELGVRFEDHEG 570
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H +
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE 53
>gi|50291223|ref|XP_448044.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527355|emb|CAG60995.1| unnamed protein product [Candida glabrata]
Length = 788
Score = 138 bits (348), Expect = 2e-30, Method: Composition-based stats.
Identities = 35/85 (41%), Positives = 49/85 (57%), Gaps = 2/85 (2%)
Query: 5 IKIYNTLERKITEFQAIDP-SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+K+YN+L R F + Y CGPTVYD +H+G+AR + D+ R L Y
Sbjct: 39 LKLYNSLTRSKEVFAPSSGTKTVSWYSCGPTVYDASHMGHARNYVSIDINRR-LIQNYFG 97
Query: 64 KCVTYVRNITDIDDKIIERARQEHP 88
+ +V+N+TDIDDKII RAR +
Sbjct: 98 YDIQFVQNVTDIDDKIIIRARHNYL 122
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 97/317 (30%), Positives = 152/317 (47%), Gaps = 27/317 (8%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ +I + + + +Q+ D L + P R + ++P+++ +++II +G
Sbjct: 230 KELGSTINDPEIFRKLPAYWEKQYDSDMAALNVIPPNVTTRVSEYVPEIVSFVEDIINNG 289
Query: 144 HAY-EANNEIIFDT-----SSIPNYGSFSRRK------IDEQKMGTRVPEKYHKKNPADF 191
+AY + + FDT + +Y I++ + + KK+ DF
Sbjct: 290 YAYATNDGSVYFDTVRFDQNEKHDYAKCQPWNKGKLDLINDGEGSLSNFDNNGKKSANDF 349
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK S P EP W+SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 350 ALWKGSKPGEPAWDSPWGKGRPGWHIECSVMASDILGSNIDIHSGGIDLAFPHHDNELAQ 409
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
S ++ N ++H G L++EG+KMSKS NFITI E L + + +RLA
Sbjct: 410 SEAKFDNKQWINYFLHTGHLHIEGQKMSKSLKNFITIQEAL-------QKYTPRQLRLAF 462
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
+ +DF + E + + + S+L +D VS
Sbjct: 463 ASVPWNNQLDFKESLIHEVKSFETSMNNFFANVRAHYNDYKSSLEDDSIIVSK------- 515
Query: 372 ARESTKNHDLLPIFNAS 388
+ + DLL F S
Sbjct: 516 -KLTNLEKDLLEEFKKS 531
>gi|115753744|ref|XP_001191812.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
gi|115928438|ref|XP_001180238.1| PREDICTED: hypothetical protein, partial [Strongylocentrotus
purpuratus]
Length = 163
Score = 138 bits (347), Expect = 2e-30, Method: Composition-based stats.
Identities = 45/151 (29%), Positives = 74/151 (49%), Gaps = 13/151 (8%)
Query: 6 KIYNTLER-------KITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLR 58
+ N+L K ++ + + CGPTVYD AHIG+A + FD++ R+L
Sbjct: 18 HVLNSLTAAHDRKSAKKEPLLLMNKNVATWFACGPTVYDSAHIGHASSYVRFDIIRRIL- 76
Query: 59 YYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
+ + V V ITDIDDKII R+ +++ + ++F +D L L
Sbjct: 77 AEFFQTSVVMVMGITDIDDKIIRRSHEQNL-----KDFRELAGFYEREFYQDMQHLNVLP 131
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
R ++HIP+++ I NII +G+ Y +
Sbjct: 132 ANVYTRVSDHIPEILTFIDNIIRNGYGYSTS 162
>gi|119622944|gb|EAX02539.1| cysteinyl-tRNA synthetase, isoform CRA_d [Homo sapiens]
Length = 622
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAI----EKLVQERL----ILLKMK---KFSSAD 429
I LG V + ++ + + L + R I + K +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDNILPELGVRFEDHEG 570
Score = 93.2 bits (230), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H +
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE 53
>gi|256828837|ref|YP_003157565.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
gi|256578013|gb|ACU89149.1| cysteine synthase [Desulfomicrobium baculatum DSM 4028]
Length = 768
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 93/458 (20%), Positives = 157/458 (34%), Gaps = 57/458 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
GP++ D + R ++ DVL + L + V + D+DD+ + AR+ +
Sbjct: 334 GPSLDDLGELDVWRRIVWLDVLAKALVERG--QSVRLAVGLADMDDRALAAAREAKIGL- 390
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + L P A + + L + +++ G AYE
Sbjct: 391 --QDFGLRAREF---MLAHAKALGVSDTVLFPLAGASQERALGLARKLLVKGQAYEKLRS 445
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVP-EKYHKKNPADFILWKRST----PMEPGWES 206
+ FD + YG S +G V Y K NPADF L KR+T + E+
Sbjct: 446 VYFDVTRDKTYGQISCVDTAGMNLGYTVDLADYVKDNPADFTLLKRATLQDLKLGDVIET 505
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
WG+ RP W ++ +A + LG + FPH +N A + A
Sbjct: 506 EWGKVRPSWFLQLAATALDALG-SVSVMFAAESHRFPHLDNFSAIWSAGAGVRPMA---- 560
Query: 267 HNGFLNLEGRKMSKSNGN-FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+ + G ++ E LE P +RL +L Y + + ++ +
Sbjct: 561 ----WMVSQPVTPREPGEAVPSLAEALEIAG------TGPALRLWLLSASYLKSLAYSPE 610
Query: 326 RLTEAEILLSKWPQTSTSKG-----------------IIDPAVLSALYNDLNTVSAIQAL 368
L ++ S + A +AL ++L+ AL
Sbjct: 611 SLVMWVKNQNRLQDAYVSASLGGAGTGVSAELEQAIYDLKTAFATALDDNLDLAHFWPAL 670
Query: 369 HKLARESTK---------NHDLLPIFNASAHILG-IEVCK-EHLNKNISIAIEKLVQERL 417
A+ + A +LG ++ + K+ LV R
Sbjct: 671 FAFAKTVNSRAGKMSTDEAALVAEQLLACDRVLGYLDHARLPLAEKSWPREAADLVGRRE 730
Query: 418 ILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
K K F AD +R +L G LED+ R T
Sbjct: 731 EARKAKDFVRADALRAELAGMGLRLEDHPAGVRLFRRT 768
>gi|927229|gb|AAA73901.1| cysteinyl-tRNA synthetase [Homo sapiens]
Length = 595
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 37/75 (49%), Positives = 47/75 (62%), Gaps = 1/75 (1%)
Query: 20 AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI 79
D + Y CGPTVYD +H+G+AR I FD+L R+L+ Y + V Y NITDIDDKI
Sbjct: 1 PQDGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKI 59
Query: 80 IERARQEHPSIPIND 94
I+RARQ H +
Sbjct: 60 IKRARQNHLFEQYRE 74
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 92/274 (33%), Positives = 132/274 (48%), Gaps = 20/274 (7%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 160 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 219
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 220 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 279
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 280 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 339
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 340 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 392
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
+++ +D++ + A + + I
Sbjct: 393 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDI 426
>gi|194379958|dbj|BAG58331.1| unnamed protein product [Homo sapiens]
Length = 662
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 111/439 (25%), Positives = 171/439 (38%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GCDVTDNSIFSKLPKFWEGDFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHKALCDNVDTRTVMEEMRALVSQCNLYMAARKAVRKRPNQALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I LG V + ++ + +Q R I + K +D
Sbjct: 492 KIFGAVEEDSSLGFPVGGPGTSLSLEATVMPYLQVLSEFREGVRKIAREQKVPEILQLSD 551
Query: 430 YIRK-QLESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDNILPELGVRFEDHEG 570
Score = 92.8 bits (229), Expect = 9e-17, Method: Composition-based stats.
Identities = 27/54 (50%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H +
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHLFEQYRE 53
>gi|311266558|ref|XP_003131141.1| PREDICTED: hypothetical protein LOC100515683 [Sus scrofa]
Length = 283
Score = 137 bits (346), Expect = 3e-30, Method: Composition-based stats.
Identities = 33/80 (41%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
K+YN+L R+ Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 47 KVYNSLTRRKDPLIVSSADAASWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CS 105
Query: 66 VTYVRNITDIDDKIIERARQ 85
V V +TD+DDKII+RA +
Sbjct: 106 VVMVMGVTDVDDKIIKRANE 125
>gi|320585786|gb|EFW98465.1| cysteinyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 916
Score = 137 bits (345), Expect = 3e-30, Method: Composition-based stats.
Identities = 34/83 (40%), Positives = 52/83 (62%), Gaps = 2/83 (2%)
Query: 5 IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I ++N+L+ F+ + Y CGPTVYD +H+G+AR + DV+ R+LR Y
Sbjct: 12 IAVHNSLKPGTPVHFEPKQEDTVTWYSCGPTVYDLSHMGHARNYVSTDVIRRILRD-YFG 70
Query: 64 KCVTYVRNITDIDDKIIERARQE 86
V ++ NITD+DDKII +AR++
Sbjct: 71 YKVQFIMNITDVDDKIIIKARRK 93
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 90/276 (32%), Positives = 131/276 (47%), Gaps = 20/276 (7%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F D L L P R T ++PQ++ + II G
Sbjct: 209 KETIDTSDQTMFTDLTQAMEKAFTDDMDALNVLRPDAVTRVTEYVPQIVAFTKGIIDKGF 268
Query: 145 AYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEAN + FD + S + + + E+ G+ K+ DF LWK
Sbjct: 269 AYEANGSVYFDIEAFERAGNTYARLRPESKNDKALQEEGEGSLSKSLAGKRRAGDFALWK 328
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
RS P EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 329 RSKPGEPFWASPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAF 388
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
++H G L++ G KMSKS NF TI + LET + A +R+
Sbjct: 389 FHRPGAGEHSWVRYFLHMGHLSIAGSKMSKSLKNFQTIQDALET------GYTARSMRIV 442
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+++ + + ++ + +A + T+
Sbjct: 443 FMLSRWNDGLEVSPDMRKQASSWENTLDNFFTNIKA 478
>gi|297267201|ref|XP_002799492.1| PREDICTED: cysteinyl-tRNA synthetase, cytoplasmic [Macaca mulatta]
Length = 662
Score = 137 bits (345), Expect = 4e-30, Method: Composition-based stats.
Identities = 112/439 (25%), Positives = 172/439 (39%), Gaps = 85/439 (19%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + +F +D L L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 139 GSDVTDNSIFSKLPKFWEGEFHRDMEALNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 198
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 199 VSNGSVYFDTAKFASSEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 258
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 259 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 318
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 319 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 371
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGII-------------------------- 347
+++ +D++ + A + + I
Sbjct: 372 HSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDILRAPVDITGQFEKWGEEEAELNKNFY 431
Query: 348 --DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA----------------SA 389
A+ AL ++++T + ++ + L +
Sbjct: 432 DKKTAIHEALCDNVDTRTVMEEMRALVSQCNLYMAARKAMRKRPNRALLENIALYLTHML 491
Query: 390 HI---------LGIEVCKEHLNKNISIAIEKLVQ--------ERLILLKMK---KFSSAD 429
I LG V + N+ + +Q R I + K +D
Sbjct: 492 KIFGAIEEESSLGFPVGGSGTSLNLESTVMPYLQVLSEFREGVRKIAREQKVPEVLQLSD 551
Query: 430 YIRKQ-LESKGFILEDYKN 447
+R L G ED++
Sbjct: 552 ALRDDILPELGVRFEDHEG 570
Score = 92.5 bits (228), Expect = 1e-16, Method: Composition-based stats.
Identities = 27/48 (56%), Positives = 34/48 (70%), Gaps = 1/48 (2%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHP 88
+G+AR I FD+L R+L+ Y + V Y NITDIDDKII+RARQ H
Sbjct: 1 MGHARSYISFDILRRVLKD-YFKFDVFYCMNITDIDDKIIKRARQNHL 47
>gi|149057587|gb|EDM08830.1| rCG43187, isoform CRA_d [Rattus norvegicus]
Length = 241
Score = 136 bits (343), Expect = 6e-30, Method: Composition-based stats.
Identities = 84/203 (41%), Positives = 113/203 (55%), Gaps = 10/203 (4%)
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
+ITD+DDKII+RA + +N + + + S ++F +D L L PT R T
Sbjct: 1 MAMSITDVDDKIIKRANE------MNVSPASLASLFEEEFKQDMAALKVLPPTVYLRVTE 54
Query: 128 HIPQMIYLIQNIILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+IPQ+I IQ II HGHAY A + FD + + + K+
Sbjct: 55 NIPQIISFIQGIIAHGHAYATATGSVYFDLRARGDKYGKLVNTVPSATAEPV---DSDKR 111
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ +DF LWK + P E W SPWG GRPGWHIECSAM+S G DIH GG+DL FPHHE
Sbjct: 112 HSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLAFPHHE 171
Query: 247 NEIAQSCCADRIEKTANIWIHNG 269
NEIAQS + ++ N ++H+G
Sbjct: 172 NEIAQSEVFHQCQQWGNYFLHSG 194
>gi|47213255|emb|CAF92916.1| unnamed protein product [Tetraodon nigroviridis]
Length = 852
Score = 136 bits (342), Expect = 7e-30, Method: Composition-based stats.
Identities = 117/494 (23%), Positives = 176/494 (35%), Gaps = 128/494 (25%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
RQ + N + ++F KD L L P R + ++P+++ + +I +G
Sbjct: 243 RQAGSQVTENSIFFSLPKFWEEEFHKDMEALNVLPPDVLTRVSEYVPEIVDFVAKVISNG 302
Query: 144 HAYEANNEIIFDTSSI-----PNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPAD 190
+ YE+N + FDT+ +Y + +QK KK+P D
Sbjct: 303 YGYESNGSVYFDTAKFDASPQHSYAKLVPEAVGDQKALQEGEGDLSVSAERLSEKKSPND 362
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIA 250
F LWK S P EP W+SPWG+GRPGWHIECSAM+ LG+ D+HGGG DL FPHH+NE+A
Sbjct: 363 FALWKASKPGEPSWDSPWGKGRPGWHIECSAMAGTVLGESMDVHGGGFDLRFPHHDNELA 422
Query: 251 QSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
QS + ++H G L + G KMSKS NFITI E L A +RLA
Sbjct: 423 QSEAFFDNDHWVRYFLHTGHLTIAGCKMSKSLKNFITIKEALAKNT-------ARQLRLA 475
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND------------ 358
LM +++ +D++ + A + D LS D
Sbjct: 476 FLMHSWKDTLDYSSNTMESAVQYERFLNVGGRPQVAADALCLSLTCRDAAQEFFLNVKDV 535
Query: 359 ---------------------------------------LNTVSAIQALHKLARESTKN- 378
++T +A++ + L +S
Sbjct: 536 LRAPTDVAGRFQKWEAAEAELNSSFFDRKSAVHEALCDNVDTRAAMEEMRLLVGQSNSYM 595
Query: 379 ---------------HDLLPIFNASAHILGI--------EVCKEHLNKNISIAI------ 409
+ I G + N ++ A+
Sbjct: 596 ASRKNARSSPNRMLLESIARYLTHMLKIFGAVEELASIGFPVGQKENMDLESAVMPYLSV 655
Query: 410 --EKLVQERLILLKMK--------------K--F-------SSADYIRKQ-LESKGFILE 443
+ R I + K F D +R L G LE
Sbjct: 656 LSDFRADVRKIAREQKGEGTRGFGVGGVLQNPPFCAVTPLLQLCDAVRDDTLPELGVRLE 715
Query: 444 DYK-NPDNGQRMTR 456
D++ + R
Sbjct: 716 DHEGDGALPLPGVR 729
Score = 84.7 bits (208), Expect = 3e-14, Method: Composition-based stats.
Identities = 25/42 (59%), Positives = 29/42 (69%), Gaps = 1/42 (2%)
Query: 45 RPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
R I FD+L R+LR Y + V Y NITDIDDKII+RARQ
Sbjct: 112 RSYISFDILRRILRD-YFKYEVFYCMNITDIDDKIIKRARQN 152
>gi|289622623|emb|CBI50892.1| unnamed protein product [Sordaria macrospora]
Length = 807
Score = 135 bits (341), Expect = 1e-29, Method: Composition-based stats.
Identities = 30/70 (42%), Positives = 45/70 (64%), Gaps = 1/70 (1%)
Query: 17 EFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
F + I Y CGPTVYD +H+G+AR + D++ R+L + Y + V +V N TD+D
Sbjct: 17 PFVPREEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMH-YFDYKVNFVMNYTDVD 75
Query: 77 DKIIERARQE 86
DKII +AR++
Sbjct: 76 DKIIIKARRK 85
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 101/371 (27%), Positives = 157/371 (42%), Gaps = 62/371 (16%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T Q F D L L P R T ++PQ++ ++ II G
Sbjct: 198 KETIDTSDQTIFTNLTKTMEQAFADDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGF 257
Query: 145 AYEANNEIIFD---------TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA+ + FD T + S + + E+ G+ KK DF LWK
Sbjct: 258 AYEADGSVYFDIGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ---- 251
+S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQ
Sbjct: 318 KSKPGEPYWPSPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAY 377
Query: 252 -SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
C ++H G L++ G KMSKS NF TI + L + ++ A +R+
Sbjct: 378 FHDCCKGEHTWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS------TYTARNMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------------KG 345
L++ + + ++ + +A+ + T+ KG
Sbjct: 432 FLLSRWNDGVEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGLKDLSLSEDVGAKG 491
Query: 346 IIDPAVLSALYND------LNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
+++ + D +T +A+Q L KL R + +
Sbjct: 492 LLEDFESAKKDLDAALRNSFDTPTAMQVLLKLVRNANIYMNSGNPNMQALESVARWVTKI 551
Query: 389 AHILGIEVCKE 399
+ G++ +
Sbjct: 552 VGVFGLDASAQ 562
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 426 SSADYIRK-QLESKGFILEDYKNPDN 450
+ +D IR L G L+D + +
Sbjct: 674 ALSDRIRDYDLTDLGVQLDDRVDGPS 699
>gi|266623922|ref|ZP_06116857.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
gi|288864254|gb|EFC96552.1| cysteine--tRNA ligase [Clostridium hathewayi DSM 13479]
Length = 215
Score = 135 bits (340), Expect = 1e-29, Method: Composition-based stats.
Identities = 57/222 (25%), Positives = 91/222 (40%), Gaps = 40/222 (18%)
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
W+HN FLN++ RKMSKS GNF T+ E+ + V+R ML HYR P++F
Sbjct: 2 KYWMHNAFLNIDNRKMSKSLGNFFTVREI-------SEKYDLSVLRFFMLSAHYRSPLNF 54
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIID---------------------PAVLSALYNDLNT 361
+ + + ++ L + ++ +A+ +D NT
Sbjct: 55 SAELMESSKNGLERILTAVDKLKDLESRAVGDSFTEGESREAVDELVAKYEAAMDDDFNT 114
Query: 362 VSAIQALHKLARESTKNHD----------LLPIFNASAHILGIEVCKEHLNKNISIAIEK 411
I A+ +L + S L +LGI E + + IE+
Sbjct: 115 ADGISAVFELVKLSNSTAGADSSKAYVVYLKETIEKLCDVLGIVT--EKKEEMLDSEIEE 172
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
++ R K K F+ AD IR +L KG +LED + +R
Sbjct: 173 MIAARQQARKDKNFALADEIRGKLLEKGIVLEDTREGVKWKR 214
>gi|164425498|ref|XP_960203.2| hypothetical protein NCU05642 [Neurospora crassa OR74A]
gi|157070948|gb|EAA30967.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 806
Score = 135 bits (339), Expect = 2e-29, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 45/71 (63%), Gaps = 1/71 (1%)
Query: 16 TEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
F + I Y CGPTVYD +H+G+AR + D++ R+L + Y + V +V N TD+
Sbjct: 16 VPFVPKEEGAISWYACGPTVYDLSHLGHARNYVSTDIIRRILMH-YFDYKVNFVMNYTDV 74
Query: 76 DDKIIERARQE 86
DDKII +AR++
Sbjct: 75 DDKIIIKARRK 85
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 99/371 (26%), Positives = 157/371 (42%), Gaps = 62/371 (16%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F D L L P R T ++PQ++ ++ II G
Sbjct: 198 KETIDTSDQTIFTDLTKTMEKAFADDMEALNVLPPDVITRVTEYVPQIVAFVEQIIQKGF 257
Query: 145 AYEANNEIIFD---------TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA+ + FD T + S + + E+ G+ KK DF LWK
Sbjct: 258 AYEADGSVYFDIGAFEKAGNTYARLRPESKNDTALQEEGEGSLSTALGGKKRSGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ---- 251
+S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQ
Sbjct: 318 KSKPGEPYWPSPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAY 377
Query: 252 -SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
C ++H G L++ G KMSKS NF TI + L + ++ A +R+
Sbjct: 378 FHDCCKGEHTWVKYFLHMGHLSIAGSKMSKSLKNFQTIQDALAS------TYTARNMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------------------KG 345
L++ + + ++ + +A+ + T+ +G
Sbjct: 432 FLLSRWNDGVEISPDMRKQADNWETTLDNFFTNIKARLSEVDASSGIKDLSLSEDAGARG 491
Query: 346 IIDPAVLSALYND------LNTVSAIQALHKLAREST-----------KNHDLLPIFNAS 388
+++ + D +T +A+Q L KL R + +
Sbjct: 492 LLEDFEQAKKDLDAALRNSFDTPTAMQVLLKLVRNANIYMNSSNPNVQALESVARWVTKI 551
Query: 389 AHILGIEVCKE 399
+ G++ +
Sbjct: 552 VGVFGLDASAQ 562
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 426 SSADYIRK-QLESKGFILEDYKNPDN 450
+ +D IR L G L+D + +
Sbjct: 674 ALSDRIRDYDLTDLGVQLDDRVDGPS 699
>gi|25808882|gb|AAN73933.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 205
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 80/214 (37%), Positives = 113/214 (52%), Gaps = 17/214 (7%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
D+L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 DLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRD 52
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRK 169
L P+ +P+A+ H+ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 53 LNALNVKKPSLEPKASEHLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN 112
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-- 226
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 113 --SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLA 170
Query: 227 ---LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 LTDTPYQIDIHAGGADLLFPHHENEACQTRCAFG 204
>gi|25808878|gb|AAN73931.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 208
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 80/217 (36%), Positives = 114/217 (52%), Gaps = 17/217 (7%)
Query: 48 IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQF 107
I FD+L R L E V VRN TDIDDKII +A +E N +I ++S + +
Sbjct: 1 IAFDLLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESY 52
Query: 108 VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFS 166
+D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 53 TRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLS 112
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH 225
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 113 VHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFK 170
Query: 226 Y-----LGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG L+FPHHENE Q+ CA
Sbjct: 171 TLALTDTPYQIDIHAGGAGLLFPHHENEACQTRCAFG 207
>gi|153827624|ref|ZP_01980291.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
gi|149737896|gb|EDM52801.1| cysteinyl-tRNA synthetase [Vibrio cholerae MZO-2]
Length = 191
Score = 134 bits (336), Expect = 4e-29, Method: Composition-based stats.
Identities = 46/204 (22%), Positives = 78/204 (38%), Gaps = 36/204 (17%)
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
KS GNF TI ++L + A +R ++ HYR ++++ + L +A L +
Sbjct: 1 KSLGNFFTIRDVLG-------HYDAETVRYFLMSGHYRSQLNYSEENLNQARASLERLYI 53
Query: 340 TSTSKG---------IIDPAVLSALYNDLNTVSAIQALHKLARESTK--------NHDLL 382
+A+ +D NT A L +ARE + L
Sbjct: 54 ALRGLDRSVPAAGGEEYVTRFTTAMNDDFNTPEAYSVLFDMAREINRLKSEDMTNASALG 113
Query: 383 PIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
+ A ++GI + + IE L++ R K +++AD R +L
Sbjct: 114 SLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKLRNDSRATKDWANADLARDKLN 173
Query: 437 SKGFILEDYKNPDNGQRMTRWKQK 460
G +LED N T W++K
Sbjct: 174 EMGIVLEDGPN------GTTWRRK 191
>gi|213401855|ref|XP_002171700.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
gi|211999747|gb|EEB05407.1| cysteinyl-tRNA synthetase [Schizosaccharomyces japonicus yFS275]
Length = 766
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 117/452 (25%), Positives = 178/452 (39%), Gaps = 92/452 (20%)
Query: 76 DDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
DDK+ ++ + + F KD L L PT R + ++P+++
Sbjct: 208 DDKL-------GSTVTDPAVFRKLAAYWEDDFNKDMRALNVLPPTVVTRVSEYMPEIVDF 260
Query: 136 IQNIILHGHAY-EANNEIIFDTSSIPNYGSFS--------RRKIDEQKMGTRVPEKYHKK 186
++ II G+AY + + FDT + G F + + + + KK
Sbjct: 261 VKKIIERGYAYAVEDGSVYFDTEAFSAAGHFYAKIEPWNKNNRELIDEGEGALAARTGKK 320
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
P DF LWK S EP W+SPWG+GRPGWHIECS M+ LG DIH GG+DL FPHH+
Sbjct: 321 RPGDFALWKASKSGEPFWDSPWGKGRPGWHIECSVMAGTILGSNIDIHSGGIDLAFPHHD 380
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
NE+AQS + N + H G L++EG+KMSKS NFITI E+L + + A
Sbjct: 381 NELAQSEAFFDCPQWINYFFHMGHLHIEGQKMSKSLKNFITIKEIL-------KKYTARQ 433
Query: 307 IRLAMLMTHYREPIDFTV---------QRLTEAEILLSKWPQTSTSKG------------ 345
+RLA L+ + +DF +++ E + T
Sbjct: 434 LRLAFLLQQWNTQMDFKDALLTHVLSTEQMYENFFRNVRALVDETDANSARGDYVPEKVN 493
Query: 346 -----------IIDPAVLSALYNDLNTVSAIQALHKLARESTKN-------------HDL 381
AV AL ++ NT +Q L ++ ++ +
Sbjct: 494 EPESELLSAFRETREAVHEALCDNFNTPLVMQRLDQIVNKANVYINGAGKHVHSRLLASI 553
Query: 382 LPIFNASAHILGIE---------VCKEHLNKNISIAIEKL--VQE--------RLILLKM 422
I G++ N + S A L V+ R + ++
Sbjct: 554 AVYITKMFQIFGLDENGSPNAIGWNSTSGNNDASSAQTTLPVVRAASTFRDTIRAMAMEK 613
Query: 423 K----KFSSADYIRK-QLESKGFILEDYKNPD 449
K ++ D R + G L D N
Sbjct: 614 KSAAEILAACDKFRDYDMAELGVSLNDRPNAP 645
Score = 132 bits (332), Expect = 1e-28, Method: Composition-based stats.
Identities = 38/94 (40%), Positives = 59/94 (62%), Gaps = 4/94 (4%)
Query: 8 YNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
+N++ T F A + ++ Y CGPTVYD +H+G+AR + D+L R+L+ Y +T
Sbjct: 24 FNSMTHTKTPFIAPNGHSLTWYCCGPTVYDASHMGHARNYVTTDILRRILQ-NYFNYDIT 82
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITS 101
+V+N+TDIDDKII RARQ++ + I T+
Sbjct: 83 FVQNVTDIDDKIIVRARQKYL---LEQYIQEHTN 113
>gi|3242657|dbj|BAA29032.1| cysteinyl-tRNA synthetase [Mus musculus]
Length = 486
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 37/73 (50%), Positives = 46/73 (63%), Gaps = 1/73 (1%)
Query: 22 DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
D + Y CGPTVYD +H+G+AR I FD+L R+LR Y + V Y NITDIDDKII
Sbjct: 1 DGKKVTWYCCGPTVYDASHMGHARSYISFDILRRVLRD-YFQYDVFYCMNITDIDDKIIR 59
Query: 82 RARQEHPSIPIND 94
RARQ + +
Sbjct: 60 RARQNYLFEQYRE 72
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 97/326 (29%), Positives = 145/326 (44%), Gaps = 31/326 (9%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ N S + ++F KD L P R + ++P+++ +Q I+ +G+ Y
Sbjct: 158 GSEVTDNSIFSKLPKFWEEEFHKDMEAPNVLPPDVLTRVSEYVPEIVNFVQKIVDNGYGY 217
Query: 147 EANNEIIFDT-----SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFIL 193
+N + FDT S +YG + +QK K++P DF L
Sbjct: 218 ASNGSVYFDTAKFAASEKHSYGKLVPEAVGDQKALQEGEGDLSISADRLSEKRSPNDFAL 277
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL FPHH+NE+AQS
Sbjct: 278 WKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRFPHHDNELAQSE 337
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ ++H G L + G KMSKS NFITI + L + A +RLA LM
Sbjct: 338 AYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKHSARQLRLAFLM 390
Query: 314 THYREPIDF---------TVQRLTEAEILLSK--WPQTSTSKGIIDPAVLSALYNDLNTV 362
+++ +D+ ++ L K G + + + N
Sbjct: 391 HSWKDTLDYSSNTMESALQYEKFMNEFFLNVKDILRAPVDITGQFEKWEAEEVELNKNFY 450
Query: 363 SAIQALHKLARESTKNHDLLPIFNAS 388
A+H+ ++ ++ A
Sbjct: 451 GKKTAVHEALCDNIDTRTVMEEMRAL 476
>gi|12846272|dbj|BAB27101.1| unnamed protein product [Mus musculus]
Length = 143
Score = 133 bits (335), Expect = 5e-29, Method: Composition-based stats.
Identities = 30/80 (37%), Positives = 47/80 (58%), Gaps = 1/80 (1%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
+++N+L + + Y CGPTVYD AH+G+A + FD++ R+L +G
Sbjct: 38 QVHNSLTGRKEPLIVARSDAVSWYSCGPTVYDHAHLGHACSYVRFDIIRRILTRVFG-CN 96
Query: 66 VTYVRNITDIDDKIIERARQ 85
V +ITD+DDKII+RA +
Sbjct: 97 VVMAMSITDVDDKIIKRANE 116
>gi|159490726|ref|XP_001703324.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280248|gb|EDP06006.1| predicted protein [Chlamydomonas reinhardtii]
Length = 665
Score = 133 bits (334), Expect = 6e-29, Method: Composition-based stats.
Identities = 39/129 (30%), Positives = 60/129 (46%), Gaps = 10/129 (7%)
Query: 5 IKIYNTLERKITEFQAI---DPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ +YN+ + F I Y CGPTVYD AH+G+AR + FD++ R+L Y+
Sbjct: 25 LMLYNSFVDEKVPFVPAAGPTSKQITWYACGPTVYDVAHMGHARNYLSFDIVRRVLEDYF 84
Query: 62 GEKCVTYVRNITDIDDKIIERARQE------HPSIPINDAISIITSKNTQQFVKDTTRLA 115
G C+ V N+TD+DDKII RAR+ S + + T + Q + +
Sbjct: 85 GYNCL-MVMNVTDVDDKIILRARRNFLLAQYKSSGKSAEEVKEFTIEAIQAGIAKQQKKV 143
Query: 116 CLAPTHQPR 124
+
Sbjct: 144 AEMEAMVAK 152
Score = 127 bits (320), Expect = 3e-27, Method: Composition-based stats.
Identities = 97/341 (28%), Positives = 146/341 (42%), Gaps = 61/341 (17%)
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
+ ++F++D L C P R + +IP++I + II +G AY +N + FDT +
Sbjct: 219 VAPGFAREFLEDMDALGCRRPDVLTRVSEYIPEIIEYVTRIIGNGMAYASNGSVYFDTQN 278
Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
+ E K++P DF LWK + P EP WESPWG GRPGWHIE
Sbjct: 279 FSAALAAEGESNFET---------SEKRSPQDFALWKAAKPGEPAWESPWGVGRPGWHIE 329
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD---RIEKTANIWIHNGFLNLEG 275
CSAM+S +G DIH GG DL FPHH+NE+AQ+ ++ N ++H G L++EG
Sbjct: 330 CSAMASSIIGSRLDIHTGGEDLRFPHHDNELAQAEAYYHHDGCKQWVNYFLHCGHLHIEG 389
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
KMSKS NF+TI E L + + A +RL + + + + + Q TE ++ +
Sbjct: 390 LKMSKSLKNFVTIREALAS-------FNARQLRLMFCLQPWNKTMMYGEQSRTEMKVREA 442
Query: 336 KWPQTSTSKGII--------DPAVLSALYNDL-------------------NTVSAIQAL 368
+ + + + DL NT + + AL
Sbjct: 443 QLRNFFGNVDAAIRNSSVNTNEQRWTTEDFDLNNRILATQAAVDAALRDNINTPAVMDAL 502
Query: 369 HKLARESTKN---------------HDLLPIFNASAHILGI 394
L + K + GI
Sbjct: 503 SDLIKAVNKYLADKSEPGAARALLLRKAAAFVTRILSVFGI 543
>gi|330720057|gb|EGG98482.1| Cysteinyl-tRNA synthetase [gamma proteobacterium IMCC2047]
Length = 182
Score = 133 bits (334), Expect = 8e-29, Method: Composition-based stats.
Identities = 40/185 (21%), Positives = 75/185 (40%), Gaps = 30/185 (16%)
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS-------------KGI 346
+ V+R ++ +HYR I+++ + L +A+ L ++ T +
Sbjct: 2 EKYNPEVVRYFLISSHYRSAINYSEESLKQAQQALERFYNTLRNAQPSNEAVPVVESNTE 61
Query: 347 IDPAVLSALYNDLNTVSAIQALHKLARESTKNHD----LLPIFNASAHILGIEVCKEHL- 401
+A+ +D NT A+ L LARE + + + LGI +
Sbjct: 62 FRIRFETAMNDDFNTPEALAVLFDLAREINRGGTSTPAQVELLKELGETLGILQQEPEAF 121
Query: 402 ------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMT 455
+ + IE+L+ +R K ++ AD IR L KG +L+D G+ T
Sbjct: 122 LQGGDTGEISAEQIEQLIIDRKNARSDKDWARADEIRDLLIEKGVVLDD------GREGT 175
Query: 456 RWKQK 460
W+++
Sbjct: 176 TWRRQ 180
>gi|302911731|ref|XP_003050554.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731491|gb|EEU44841.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 800
Score = 132 bits (333), Expect = 9e-29, Method: Composition-based stats.
Identities = 101/370 (27%), Positives = 151/370 (40%), Gaps = 64/370 (17%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T F++D L L P R T ++PQ+ ++ I+ G
Sbjct: 198 KETIDTSDQTMFTDLTQSMEDLFMEDMDALNVLRPDVITRVTEYVPQIAKFVERIVDKGF 257
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA + FD S+ + + + + E+ G+ KK+P DF LWK
Sbjct: 258 AYEAEGSVYFDISAFEKAGNTYARLRPDNRNDKSLQEEGEGSLSKNLGGKKSPGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W SPWG GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 318 KSKAGEPYWPSPWGNGRPGWHIECSVMASDVLGAQMDIHSGGIDLAFPHHDNELAQSEAY 377
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI + L T + +R+
Sbjct: 378 FCEHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIQDALATN------YSPRGMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
LM + + ++ + +A+ S +
Sbjct: 432 FLMGRWNDGVEISPDMRLQADNWESTISNFFINVKALLAEAGISSGVKSLSINEDAKPTE 491
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FN 386
+AL N +T A+ + KL + K+ DL +
Sbjct: 492 GLLGELEQAKQEFEAALTNSFDTPRAMSVILKLVNTANVHLRDNKDADLAALETIARWIT 551
Query: 387 ASAHILGIEV 396
I G++
Sbjct: 552 KVVGIFGLDA 561
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MKKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M+ +K+YN+L F I+ + Y CGPTVYD +H+G+AR + D++ R+L++
Sbjct: 1 MES-LKLYNSLNPGAPVPFVPIEKGKVAWYACGPTVYDKSHLGHARNYVSTDIIRRILQH 59
Query: 60 YYGEKCVTYVRN 71
Y V +V N
Sbjct: 60 -YFGFEVNFVMN 70
>gi|258404957|ref|YP_003197699.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
gi|257797184|gb|ACV68121.1| cysteine synthase [Desulfohalobium retbaense DSM 5692]
Length = 764
Score = 131 bits (329), Expect = 2e-28, Method: Composition-based stats.
Identities = 81/443 (18%), Positives = 146/443 (32%), Gaps = 62/443 (13%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R ++ D+L R LR+ E V V + D D+ + A Q+ ++ +
Sbjct: 344 WRRLVWADILVRYLRHKDFE--VHGVVGLADWDEHLSHLAEQQGCNLQEMRGAML----- 396
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
+ RL H A+ + L + ++ G YE + +D +YG
Sbjct: 397 -DRAEALLRRLGLETGWHCQAASQCRETQLALCRELVRKGLGYEKLRSVYYDVGRDTDYG 455
Query: 164 SFSRRKIDEQKMGTRVPEKYH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIE 218
R + + +G V + K NP DF L KR+ W++ WG RP W+++
Sbjct: 456 VLRRTDLAKLSLGKTVDLDRYAKDNPRDFTLLKRTNLADLKRGDFWKTEWGNVRPSWYLQ 515
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+A + G D+ G FPH EN A + + M
Sbjct: 516 MAAAAL-AEGIAMDVVLAGRAHHFPHMENLRALWAVRN--------------ALPQVWLM 560
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW- 337
+++ + ++ + G +RL +L YR+P+ + T +
Sbjct: 561 TQAVEGEAIVPDIETASERLG---GMHALRLWLLSGGYRKPLHSSEDNATMWRRNWERLQ 617
Query: 338 -----------------PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
P + + L +DL+ L L R K
Sbjct: 618 ESVATLHVARGEGGQVDPGFEQTLYDVKTMFWDQLEDDLDLQHFWPVLWSLCRTILKKAS 677
Query: 381 L-----------LPIFNASAHILGIEVC--KEHLNKNISIAIEKLVQERLILLKMKKFSS 427
+ ILG+ + + R + + F+
Sbjct: 678 QGRLAPVEAARGWKLVTDLDTILGVVDWHTLPLRQDQWPEGVRDRIALREQARRDRDFAR 737
Query: 428 ADYIRKQLESKGFILEDYKNPDN 450
AD +R+++ +KG+ LED
Sbjct: 738 ADLLRQEIVAKGYRLEDTPQGPR 760
>gi|25808830|gb|AAN73907.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 205
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 78/214 (36%), Positives = 114/214 (53%), Gaps = 17/214 (7%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKD 110
D+L R L E V VRN TDIDDKII +A +E S I ++S + + +D
Sbjct: 1 DLLRRTLELSGYE--VVLVRNFTDIDDKIINKAFKESKS------IQELSSIYIESYTRD 52
Query: 111 TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRK 169
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 LNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN 112
Query: 170 IDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----S 223
+ + ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 113 SSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLA 170
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 LANTPYQIDIHAGGADLLFPHHENEACQTRCAFG 204
>gi|116203083|ref|XP_001227353.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
gi|88177944|gb|EAQ85412.1| hypothetical protein CHGG_09426 [Chaetomium globosum CBS 148.51]
Length = 794
Score = 130 bits (327), Expect = 4e-28, Method: Composition-based stats.
Identities = 104/371 (28%), Positives = 156/371 (42%), Gaps = 62/371 (16%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F D L L P R T ++PQ++ ++ II G
Sbjct: 190 KETIDTSDQTMFTDLTQAMEKAFSDDMEALNVLPPDAVTRVTEYVPQIVSFVEQIIAKGF 249
Query: 145 AYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEAN + FD ++ S + + + E+ G+ KK DF LWK
Sbjct: 250 AYEANGSVYFDIAAFEQAGNTYARLRPESKNDKALQEEGEGSLSKSLEGKKRSGDFALWK 309
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S P EP W SPWG GRPGWHIECS M+S LG+ DIH GG+DL FPHH+NE+AQS
Sbjct: 310 KSKPGEPFWPSPWGAGRPGWHIECSVMASDKLGEQMDIHSGGIDLAFPHHDNELAQSEAY 369
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI + L T ++ A +R+
Sbjct: 370 FHQYERGEHSWVNYFLHMGHLSIAGSKMSKSLKNFQTIQDALAT------TYTARNMRIV 423
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
LM + + ++ + +A+ S T+
Sbjct: 424 FLMGRWNDGVEISGDMRKQADSWESTIDNFFTNVKAKLAEAGSTADGIKGRSLEEATSLT 483
Query: 344 --KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI-------------FNAS 388
+ SAL N +T A+Q + +L + + +
Sbjct: 484 EELEQAKKDLDSALRNSFDTPGAMQVILRLVKNANIYMNDKSAQPNLQAIEAVARWVTKI 543
Query: 389 AHILGIEVCKE 399
ILG++ +
Sbjct: 544 VGILGLDASAQ 554
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 28/105 (26%), Positives = 48/105 (45%), Gaps = 17/105 (16%)
Query: 5 IKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
I ++N+L+ F + + Y CGPT YD +H+G+AR + D++ R+L +++G
Sbjct: 4 ITVHNSLKPGSPVPFVPREEGKVSWYACGPTTYDLSHLGHARNYVSTDIIRRILIHHFG- 62
Query: 64 KCVTYVRNITDIDDKIIERARQ------EHPSIPINDAISIITSK 102
V +V II +AR+ E I + K
Sbjct: 63 LNVNFV---------IIIKARRKRLLELEKEKPYSPSHIRELAFK 98
>gi|298528121|ref|ZP_07015525.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
gi|298511773|gb|EFI35675.1| cysteine synthase B [Desulfonatronospira thiodismutans ASO3-1]
Length = 776
Score = 130 bits (326), Expect = 5e-28, Method: Composition-based stats.
Identities = 78/446 (17%), Positives = 149/446 (33%), Gaps = 61/446 (13%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R + DVL R L + V + D DD+ +E R++ S + +
Sbjct: 340 WRRAVFLDVLCRRLAQKGHDP--NPVAAVADFDDRTLECMREKGVSRE------DFSRET 391
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
R+ + A + I + ++ G AYE + FD +YG
Sbjct: 392 LDSIRDLAGRIKLNRNFNFLPAAGSLDTGIEMCNKLLSRGLAYEKLRCVYFDVGRDRDYG 451
Query: 164 SFSRRKIDEQKMGTRVPEKYH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIE 218
+ ++ G V + + K +P DF L KR++ E ++ WG RP W+++
Sbjct: 452 LLAGIDPEKIISGKTVDLEDYVKDSPRDFTLLKRASLKDLKEENVLKTKWGNVRPSWYLQ 511
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+A+++ G D+ G +FPH +N ++ + + W ++
Sbjct: 512 MAAVAAENAG-HLDLVMAGEAHLFPHLDNLLSIWKGSTSLRPQC--WSLALPVH------ 562
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
+ ++ + +R+ ++ Y P+ F+ + L +
Sbjct: 563 ---HQEKGEPLPGIQEMAREMGGFHP--LRMWLMSVSYHRPLMFSPKNLEMWVKNWKRLQ 617
Query: 339 QTSTSKG--------------IIDPAVLS-------ALYNDLNTVSAIQALHKLARESTK 377
+ ++ L +DL L + R+ K
Sbjct: 618 ELMGKLKICARGTRPDKETGSEVEKQCRELGPALSGCLDDDLALYKFWPQLFEFCRKMQK 677
Query: 378 NHDL-----------LPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKK 424
D L IL I + + I +L+Q R + K
Sbjct: 678 LLDENLMDVRDAGSCLHHLQGLDSILKIIDWQALPLAENEYPVQISELLQARARAKEAKD 737
Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
F +AD +R + S GF L D ++
Sbjct: 738 FVAADELRDRALSSGFRLVDTRDGTR 763
>gi|25808822|gb|AAN73903.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 204
Score = 130 bits (326), Expect = 6e-28, Method: Composition-based stats.
Identities = 78/213 (36%), Positives = 112/213 (52%), Gaps = 17/213 (7%)
Query: 52 VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDL 52
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKI 170
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 NALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN- 111
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SS 224
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 112 -SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 ANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 203
>gi|171682892|ref|XP_001906389.1| hypothetical protein [Podospora anserina S mat+]
gi|170941405|emb|CAP67056.1| unnamed protein product [Podospora anserina S mat+]
Length = 843
Score = 129 bits (325), Expect = 8e-28, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 4 KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
I ++N+L+ F I Y CGPT YD +H+G+AR + D++ R+ + Y
Sbjct: 38 SITVHNSLKPGPPVPFVPKTDGKISWYACGPTTYDLSHLGHARNYLSNDIIRRIFQD-YF 96
Query: 63 EKCVTYVRNITDIDDKIIERARQE 86
V +V N TD+DDKII +AR++
Sbjct: 97 GYEVNFVMNYTDVDDKIIIKARRQ 120
Score = 125 bits (314), Expect = 1e-26, Method: Composition-based stats.
Identities = 101/315 (32%), Positives = 149/315 (47%), Gaps = 23/315 (7%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + + F D L L PT R T ++PQ++ ++ II G
Sbjct: 234 KETIDTSDQTIFTDLTQRMEKAFNDDMAALNVLEPTAVTRVTEYVPQIVSFVEQIIQKGF 293
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH----------KKNPADFILW 194
AYEA+ + FD + G+ R E + + E+ KK ADF LW
Sbjct: 294 AYEADGSVYFDIGAFEKAGNTYARLRPESRNDKALQEEGEGSLSKSSGGQKKRDADFALW 353
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ--- 251
KRS P EP W SPWG+GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQ
Sbjct: 354 KRSKPGEPYWPSPWGQGRPGWHIECSVMASDKLGDNMDIHSGGIDLAFPHHDNELAQSEA 413
Query: 252 --SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRL 309
C N ++H G L++ G KMSKS NF TI + L T ++ A +R+
Sbjct: 414 FFHQCGKGEHTWVNYFLHMGHLSIAGSKMSKSLKNFQTIQDALAT------TYTARNMRI 467
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY--NDLNTVSAIQA 367
LM + + ++ + +A+ + T+ V + L+ A +
Sbjct: 468 VFLMGRWNDGVEISGDMRKQADNWENTVDNFFTNIKAKLAEVDAPTDGVKYLSLTGAGNS 527
Query: 368 LHKLARESTKNHDLL 382
L + ++ K+ D
Sbjct: 528 LIEDLEQAKKDLDAA 542
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 7/26 (26%), Positives = 12/26 (46%), Gaps = 1/26 (3%)
Query: 426 SSADYIRK-QLESKGFILEDYKNPDN 450
+ +D IR L G L+D + +
Sbjct: 709 ALSDRIRDYDLTDLGVQLDDQTDKPS 734
>gi|302805410|ref|XP_002984456.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
gi|300147844|gb|EFJ14506.1| hypothetical protein SELMODRAFT_180921 [Selaginella moellendorffii]
Length = 450
Score = 129 bits (325), Expect = 9e-28, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ + S+ ++F +D L P R T++I +++ ++ II +G+AY
Sbjct: 167 GHTVTDHGIYRAHASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAY 226
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------HKKNPADFILWKRSTPM 200
E + + FDT + ++ + E +KKN DF LWK S
Sbjct: 227 EVDGSVYFDTEAFNTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVG 286
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
EP W+SPWG GRPGWHIECSAM+S +G++ DIH GG DL FPHH+NE+AQ+ +
Sbjct: 287 EPFWDSPWGPGRPGWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQ 346
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
N + H+G L++ G KMSKS NF TI + LE + + +RL L+ + +P+
Sbjct: 347 WVNYFFHSGHLSVNGLKMSKSLKNFTTIRQALEEL-----HYSSSQLRLLFLLHQWDKPM 401
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
DF+ ++EA ++ I V S + + + I
Sbjct: 402 DFSASAMSEAAQKEKQFDNLFREVRDIVKEVNSCWHLSVIALQFI 446
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
+ Y+CGPTVYD +HIG+AR + FD+L R+L + V YV N+TD+DDKII+RAR+
Sbjct: 16 VTWYICGPTVYDSSHIGHARNYVTFDILRRILED-FFGYDVFYVMNVTDVDDKIIKRARR 74
Query: 86 EHPSIPINDAISIITS 101
+H + + +
Sbjct: 75 DHLLRMYLERVKDPSE 90
>gi|302782427|ref|XP_002972987.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
gi|300159588|gb|EFJ26208.1| hypothetical protein SELMODRAFT_97996 [Selaginella moellendorffii]
Length = 457
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 91/285 (31%), Positives = 143/285 (50%), Gaps = 11/285 (3%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ + S+ ++F +D L P R T++I +++ ++ II +G+AY
Sbjct: 174 GHTVTDHGIYRAHASRYEKEFFEDMKSLGVKPPDVITRVTDYISKIVKYVETIIANGYAY 233
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY------HKKNPADFILWKRSTPM 200
E + + FDT + ++ + E +KKN DF LWK S
Sbjct: 234 EVDGSVYFDTEAFNTKHTYGKLNPAAVGCVGLASESETNFKTRNKKNNNDFALWKESKVG 293
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
EP W+SPWG GRPGWHIECSAM+S +G++ DIH GG DL FPHH+NE+AQ+ +
Sbjct: 294 EPFWDSPWGPGRPGWHIECSAMASDVIGEIIDIHSGGADLKFPHHDNELAQAEAYHSCSQ 353
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
N + H+G L++ G KMSKS NF TI + LE + + +RL L+ + +P+
Sbjct: 354 WVNYFFHSGHLSVNGLKMSKSLKNFTTIRQALEEL-----HYSSSQLRLLFLLHQWDKPM 408
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
DF+ ++EA ++ I V S + + + I
Sbjct: 409 DFSASAMSEAAQKEKQFDNLFREVRDIVKEVNSCWHLSVIALQFI 453
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 1/76 (1%)
Query: 26 IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ 85
+ Y+CGPTVYD +HIG+AR + FD+L R+L + V YV N+TD+DDKII+RAR+
Sbjct: 23 VTWYICGPTVYDSSHIGHARNYVTFDILRRILED-FFGYDVFYVMNVTDVDDKIIKRARR 81
Query: 86 EHPSIPINDAISIITS 101
+H + + +
Sbjct: 82 DHLLKMYLERVKDPSE 97
>gi|119183429|ref|XP_001242754.1| hypothetical protein CIMG_06650 [Coccidioides immitis RS]
Length = 809
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 113/476 (23%), Positives = 170/476 (35%), Gaps = 120/476 (25%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY-EANNEIIF 154
+ ++ + +F++D L L R T IP+++ ++ I+ HG AY A+ + F
Sbjct: 244 FTKLSQRFEDRFMEDARALNILDADEVTRVTEFIPEIVSFVEQIVQHGFAYATADGSVYF 303
Query: 155 DTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D ++ G+ + G + + K++ ADF LWK S EP W
Sbjct: 304 DIAAFEAAGNQYARLEPWNRNDTALQADGEGALINKAVEKRSKADFALWKASKAGEPSWP 363
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR----IEKT 261
SPWG GRPGWHIECSAM+S LGK DIH GG+DL FPHH+NE+AQS ++
Sbjct: 364 SPWGPGRPGWHIECSAMASARLGKQMDIHSGGIDLAFPHHDNELAQSEAYWHKGCSHDQW 423
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
N ++H G L+++G KMSKS NF TI E LE W +R+ LM ++ + I+
Sbjct: 424 VNYFLHMGHLSIQGSKMSKSLKNFTTIREALERGD-----WTPRSLRIVFLMGNWADGIE 478
Query: 322 FTVQRLTEAEILLSKWPQTS---------------------TSKGIIDPAVLSALYNDLN 360
T + K AV +L + N
Sbjct: 479 ITEDLVKAGNAWEEKLNNFFLSVRNLAAENELSSSTDDSLALQLKAAQKAVHDSLCDSFN 538
Query: 361 TVSAIQALHKLARESTKN----------HDLLPIFNASAHILGIEVCKEHLNKNI----- 405
T A+ A+ L + D+ + +I G+ ++ I
Sbjct: 539 TAGAMIAISGLVTQYNSADKSKLNAQDVQDVAKWVTSMVNIFGLNGSAMPASEEIGWSGI 598
Query: 406 --SIAIEKLV--------QERLILL-----------------------------KMK--- 423
A + + R + K
Sbjct: 599 EVPEAAKAFLYPLSAMRDVLREKARSKSGFSVDTIKSVAQTGEEALKQNPTPSEEAKPYE 658
Query: 424 ----KF------------------SSADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
F + D +R L G LED R
Sbjct: 659 RVLSDFCTKLESFEQSDTVSKEILALCDRLRDVDLFDLGVYLEDRHEKPALVRTVS 714
Score = 96.3 bits (238), Expect = 9e-18, Method: Composition-based stats.
Identities = 24/67 (35%), Positives = 37/67 (55%), Gaps = 6/67 (8%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K++N+L R F +DP + + Y CGPTVYD AH+G+AR I + R + +
Sbjct: 58 PPLKLWNSLTRSKVPFVPLDPTGNKVTWYACGPTVYDDAHLGHARNYI----ITRARQQH 113
Query: 61 YGEKCVT 67
+ VT
Sbjct: 114 LFMEYVT 120
>gi|221104705|ref|XP_002168960.1| PREDICTED: similar to predicted protein [Hydra magnipapillata]
Length = 543
Score = 129 bits (324), Expect = 1e-27, Method: Composition-based stats.
Identities = 110/429 (25%), Positives = 163/429 (37%), Gaps = 104/429 (24%)
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
Q +I + S +T +++ D L R + +IP+++ I+ II +G
Sbjct: 46 AQFGSTITEHRIFSELTQYWEKEYNDDMKSLNIRPADIITRVSQYIPEIVAYIERIIENG 105
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
+ N KK+ DF LWK S EP
Sbjct: 106 DLSQLNPGA--------------------------------KKSDRDFALWKASKVGEPY 133
Query: 204 WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
W SPWG GRPGWHIECSAM+S LG DIH GG+DL FPHH+NEIAQ+ + N
Sbjct: 134 WPSPWGNGRPGWHIECSAMASDILGNSIDIHTGGVDLKFPHHDNEIAQAEAHYNCTQWIN 193
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
++H G L +EG KMSKS NF+T+ + L + + IRLA L+ + +D++
Sbjct: 194 YFLHAGHLTIEGCKMSKSLKNFVTVKDAL-------KKNTSRQIRLAFLLHAWNATLDYS 246
Query: 324 VQRLTEAEILLSKWPQTSTSKGII----------------------------DPAVLSAL 355
L EAE + + + I + AL
Sbjct: 247 SNVLKEAEQIEKLFMDFFLNVKDIIRNNESFSLTSHNYKEEEKLLQNNFMEKKQKIHEAL 306
Query: 356 YNDLNTVSAIQALHKLARESTKN----------------HDLLPIFNASAHILGIEVCKE 399
+ +NTV A+Q + L + + + I G +
Sbjct: 307 CDSINTVVAVQQMQSLVKLANIYIGQARQNNKVPNHAVIGGIAKYLTKMLKIFGANDGDQ 366
Query: 400 HLNKNIS--------IAI----EKLVQE-----RLILLKMK---KFSSADYIRK-QLESK 438
+ + I +LV E R + + K D IR +L
Sbjct: 367 EIGFSSVDVSGNLKHEEIVMPYIQLVAEFRESVRKVAREKKVPEILKMCDEIRDTKLPEL 426
Query: 439 GFILEDYKN 447
G LED++
Sbjct: 427 GVQLEDHEG 435
>gi|25808880|gb|AAN73932.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 203
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 111/212 (52%), Gaps = 17/212 (8%)
Query: 53 LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKID 171
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 ALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSH 225
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 111 SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFG 202
>gi|25808808|gb|AAN73896.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 203
Score = 129 bits (323), Expect = 1e-27, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 113/212 (53%), Gaps = 17/212 (8%)
Query: 53 LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKID 171
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 ALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSS 112
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSH 225
+ + ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 113 VEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFG 202
>gi|25808832|gb|AAN73908.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 204
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 113/213 (53%), Gaps = 17/213 (7%)
Query: 52 VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+L R L E V VRN TDIDDKII +A +E N I ++S + + +D
Sbjct: 1 LLRRTLELSGYE--VMLVRNFTDIDDKIINKALKE------NKIIQELSSIYIESYTRDL 52
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKI 170
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 NALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNS 112
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SS 224
+ + ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 113 SVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 ANAPYQIDIHAGGADLLFPHHENEACQTRCAFG 203
>gi|25808826|gb|AAN73905.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 203
Score = 128 bits (321), Expect = 2e-27, Method: Composition-based stats.
Identities = 78/212 (36%), Positives = 112/212 (52%), Gaps = 17/212 (8%)
Query: 53 LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKID 171
L P+ +P+A+ ++ M+++I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 ALNVKKPSLEPKASEYLGAMVHMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSH 225
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 111 SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ CA
Sbjct: 171 NAPYQIDIHAGGADLLFPHHENEACQTRCAFG 202
>gi|227885421|ref|ZP_04003226.1| conserved hypothetical protein [Escherichia coli 83972]
gi|227837606|gb|EEJ48072.1| conserved hypothetical protein [Escherichia coli 83972]
Length = 80
Score = 127 bits (319), Expect = 3e-27, Method: Composition-based stats.
Identities = 35/88 (39%), Positives = 48/88 (54%), Gaps = 8/88 (9%)
Query: 25 NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ MYVCG T+YD HIG+ R + FDV+ R LRY + YVRN+TD+DDKII RA
Sbjct: 1 KVGMYVCGVTIYDLCHIGHGRTFVAFDVVARYLRYLGY--SLNYVRNVTDVDDKIIRRAA 58
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTT 112
+ H + +T + + D
Sbjct: 59 ENH------ETCDQLTERMLAEMHADFD 80
>gi|46123171|ref|XP_386139.1| hypothetical protein FG05963.1 [Gibberella zeae PH-1]
Length = 800
Score = 127 bits (318), Expect = 5e-27, Method: Composition-based stats.
Identities = 99/369 (26%), Positives = 151/369 (40%), Gaps = 64/369 (17%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F D L L P R T ++PQ+ ++ I+ G
Sbjct: 198 KETIDTRDQTMFTDLTQSMEKLFTDDMDALNVLRPDVITRVTEYVPQIADFVKTIVDKGF 257
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYEA+ + FD ++ + + + + E+ G+ KKNP DF LWK
Sbjct: 258 AYEADGSVYFDITAFEKAGNTYARLRPDNRNDKSLQEEGEGSLSKGLSGKKNPGDFALWK 317
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W SPWG GRPGWHIECS M+ LG DIH GG+DL FPHH+NE+AQS
Sbjct: 318 KSKAGEPFWSSPWGDGRPGWHIECSVMAGAVLGSNMDIHSGGIDLAFPHHDNELAQSEAY 377
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
N ++H G L++ G KMSKS NF TI + L T + + +R+
Sbjct: 378 FCEHGKGEHTWVNYFLHMGHLSISGSKMSKSLKNFQTIQDALATT------YSSRGMRIV 431
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
LM + + ++ + +A+ S +
Sbjct: 432 FLMGRWNDGVEISPDMRLQADNWESTISNFFINVKALLAEAGITQGVKSLSLSANGKSSE 491
Query: 344 -----KGIIDPAVLSALYNDLNTVSAIQALHKLARES------TKNHDLLPI------FN 386
A+ N +T A+ + KL + K+ DL+ +
Sbjct: 492 GLLGELEQAKQEFEGAMTNSFDTPKAMSVILKLVNTANVHLRDNKDADLVALESIARWIT 551
Query: 387 ASAHILGIE 395
I G++
Sbjct: 552 KIVGIFGLD 560
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 42/72 (58%), Gaps = 3/72 (4%)
Query: 1 MKKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M+ +K+YN+L+ F I+ + Y CGPTVYD +H+G+AR + D++ R+L +
Sbjct: 1 MES-LKLYNSLKPGAPVPFVPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRILMH 59
Query: 60 YYGEKCVTYVRN 71
Y V +V N
Sbjct: 60 -YFGFEVKFVMN 70
>gi|156063134|ref|XP_001597489.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980]
gi|154697019|gb|EDN96757.1| hypothetical protein SS1G_01683 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 753
Score = 126 bits (317), Expect = 6e-27, Method: Composition-based stats.
Identities = 104/387 (26%), Positives = 158/387 (40%), Gaps = 73/387 (18%)
Query: 77 DKIIERARQ-----------EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
DKI A + + + + +T +QF++D L L P R
Sbjct: 136 DKIFGGADEILLPYLDSLYKDSIDAKDHTIFTNVTQYWEEQFMEDMDALNVLRPDVITRV 195
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH- 184
T ++P++ ++ II G AYE++ + FD ++ G+ R E + + E+
Sbjct: 196 TTYVPKIATFVEKIIQKGFAYESDGSVYFDIAAFEKAGNPYARLRPESRNDKALQEEGEG 255
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGG 236
K+ DF LWK+S EP W SPWG GRPGWHIECS M+S LG DIH G
Sbjct: 256 SLSKNLGGKRGAGDFALWKKSKAGEPSWPSPWGEGRPGWHIECSVMASDVLGSKMDIHSG 315
Query: 237 GLDLIFPHHENEIAQSCCA-----DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
G+DL FPHH+NE+AQS + N ++H G L++ G KMSKS NF TI +
Sbjct: 316 GIDLAFPHHDNELAQSEAYFCEHEHGPHEWVNYFLHMGHLSIAGSKMSKSLKNFQTIRDA 375
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ-------------------------- 325
L T + +R+ LM + + ++ +
Sbjct: 376 LATD------YTPRSMRIVFLMGRWNDGVEISPDMRLMADAWEATVNNFFVNVKSLIIEA 429
Query: 326 ---RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST------ 376
R E LS P+ + + +AL +T A+ L +L +ES
Sbjct: 430 GNSRSDEELKSLSIHPELQIALDKAQADLQTALTESFDTPRAMLILQELIKESNVHIGSH 489
Query: 377 -------KNHDLLPIFNASAHILGIEV 396
+ I G++
Sbjct: 490 KNDLDIQGLEKVARWITKILGIFGLDA 516
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 4 KIKIYNTLE-RKITEFQAIDPSNIRMYVCGPT 34
++K++N+L+ F I+ + YVCGPT
Sbjct: 3 QLKVHNSLKPGGPVPFVPIEKGKVSWYVCGPT 34
>gi|25808828|gb|AAN73906.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 204
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 77/213 (36%), Positives = 111/213 (52%), Gaps = 17/213 (7%)
Query: 52 VLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDT 111
+L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LLRRTLELSGYE--VILVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDL 52
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKI 170
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 NALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN- 111
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SS 224
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 112 -SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLAL 170
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ C
Sbjct: 171 ANTPYQIDIHAGGADLLFPHHENEACQTRCTFG 203
>gi|25808802|gb|AAN73893.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 203
Score = 126 bits (316), Expect = 8e-27, Method: Composition-based stats.
Identities = 77/212 (36%), Positives = 109/212 (51%), Gaps = 17/212 (8%)
Query: 53 LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
L R L E V VRN TDIDDKII +A +E N +I ++S + + +D
Sbjct: 1 LRRTLELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLN 52
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKID 171
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 ALNVKKPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN-- 110
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH----- 225
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 111 SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALT 170
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ C
Sbjct: 171 NTPYQIDIHAGGADLLFPHHENEACQTRCTFG 202
>gi|39940736|ref|XP_359905.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
gi|145010901|gb|EDJ95557.1| hypothetical protein MGG_04872 [Magnaporthe oryzae 70-15]
Length = 803
Score = 126 bits (316), Expect = 9e-27, Method: Composition-based stats.
Identities = 104/438 (23%), Positives = 175/438 (39%), Gaps = 88/438 (20%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T + F D L L P R T ++PQ+ + I+ G
Sbjct: 199 KETIDTSDQSMFTDLTRRMEADFFDDMDNLNNLRPDEITRVTEYVPQIADFVDRIVKKGF 258
Query: 145 AYEANNEIIFDTSSIPN---------YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYE+ + FD ++ S + + E+ G+ K++P DF LWK
Sbjct: 259 AYESEGSVYFDIAAFEKGGNTYARLKPESRGDKALQEEGEGSLSKGAGGKRSPGDFALWK 318
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S P EP W SPWG GRPGWHIECS M+S LG D+H GG+DL FPHH+NE+AQS
Sbjct: 319 QSKPGEPYWPSPWGNGRPGWHIECSVMASDRLGAQMDVHSGGIDLAFPHHDNELAQSEAY 378
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
++H G L++ G KMSKS NF TI + L T ++ A +R+
Sbjct: 379 YCEHGKGEHTWVKYFLHMGHLSISGSKMSKSLKNFQTIKDALAT------TYSARNLRIV 432
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
+M + E ++ + + +A+ + Q T+
Sbjct: 433 FMMGRWNEGVEISPELRVQADSWENTVNQFFTNTKSWLAEAGVASTNDGLESLSISDDAA 492
Query: 344 -------KGIIDPAVLSALYNDLNTVSAIQALHKLAREST-------KNHDLLPIFN--- 386
+ L N +T A++ + +L + + DL+ I
Sbjct: 493 QQGLLADLDQAKKDTQAFLTNSFDTNGALRTIAELVNKVNVHKREHKNDADLVAIERIAR 552
Query: 387 ---ASAHILGIEVCKE------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
I G++ + + S ++ + K ++ +R ++++
Sbjct: 553 WVTRMVGIFGLDANAKPPYNGLGWVSDPSAGLDL-----EAVRKT--YA---SVRDEIKT 602
Query: 438 KG-----FILEDYKNPDN 450
G + D ++P +
Sbjct: 603 SGFAESVIAVLDTQSPAS 620
Score = 110 bits (274), Expect = 5e-22, Method: Composition-based stats.
Identities = 24/71 (33%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 2 KKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
IK++N+L+ F+ + N+ Y CGPTVYD +H+G+AR + D++ R+ +
Sbjct: 3 SPTIKVHNSLQPGGPVPFEPKEKGNVSWYACGPTVYDQSHLGHARNYVSTDIIRRIFLH- 61
Query: 61 YGEKCVTYVRN 71
Y + V +V N
Sbjct: 62 YFDYKVKFVMN 72
>gi|156349415|ref|XP_001622048.1| hypothetical protein NEMVEDRAFT_v1g15338 [Nematostella vectensis]
gi|156208453|gb|EDO29948.1| predicted protein [Nematostella vectensis]
Length = 136
Score = 126 bits (316), Expect = 9e-27, Method: Composition-based stats.
Identities = 34/77 (44%), Positives = 46/77 (59%), Gaps = 1/77 (1%)
Query: 18 FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
F + + Y CGPTVYD +H+G+AR I FD++ R+L+ Y V V N+TDIDD
Sbjct: 7 FIPSNGRRVTWYSCGPTVYDASHMGHARSYITFDIVRRVLQ-SYFNYDVFCVMNVTDIDD 65
Query: 78 KIIERARQEHPSIPIND 94
KII RAR+ H +
Sbjct: 66 KIIHRARRNHLQEKYRE 82
>gi|149057585|gb|EDM08828.1| rCG43187, isoform CRA_b [Rattus norvegicus]
Length = 385
Score = 125 bits (314), Expect = 2e-26, Method: Composition-based stats.
Identities = 98/347 (28%), Positives = 147/347 (42%), Gaps = 85/347 (24%)
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
K++ +DF LWK + P E W SPWG GRPGWHIECSAM+S G DIH GG+DL
Sbjct: 41 DSDKRHSSDFALWKGAKPQEVFWASPWGDGRPGWHIECSAMASEVFGSQLDIHTGGIDLA 100
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFGG 299
FPHHENEIAQS + ++ N ++H+G L++ + KMSKS N+ITI + L
Sbjct: 101 FPHHENEIAQSEVFHQCQQWGNYFLHSGHLHVKGKEEKMSKSLKNYITIKDFL------- 153
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW---------------------- 337
+++ V RL L T+YR ID++ L EA LL
Sbjct: 154 QTFSPDVFRLFCLRTNYRSAIDYSDSTLEEARHLLLGLASFVEDARAYVKGQLICGPVGE 213
Query: 338 PQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------------HD 380
AV +AL ND +T A+ ++ L + +
Sbjct: 214 DVLWERLASTKKAVKAALANDFDTPRAVNSILDLVHHANRQLRAVSKEAGGPRSPTVFGA 273
Query: 381 LLPIFNASAHILGIEVCKEHLNKNISI------AIEKLVQERLILLKMKKFSSA------ 428
++ +GI + K S +++LV+ RL + + ++ A
Sbjct: 274 IVAYVEQFFETVGISLAKRQCVSGDSSTVALHCVVDELVRFRLKVRQ---YALATPGATG 330
Query: 429 -----------------DYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
D +R+ L + G ++D G + W+
Sbjct: 331 EARKQQLQERQPLLEACDALRQDLMTHGINVKDR-----GHAASTWE 372
>gi|25395240|pir||A87730 protein Y23H5A.1 [imported] - Caenorhabditis elegans
Length = 230
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
++ +YN+L R+ F + + + Y+CGPTV D +H+G+AR + D+L R+ R Y
Sbjct: 96 PQLTVYNSLTRQKEVFVPNEGARVGWYICGPTVNDSSHMGHARSYLSLDILRRVFRD-YF 154
Query: 63 EKCVTYVRNITD 74
V ++ NITD
Sbjct: 155 GYDVEFIMNITD 166
>gi|239907708|ref|YP_002954449.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
gi|239797574|dbj|BAH76563.1| cysteine synthase B [Desulfovibrio magneticus RS-1]
Length = 773
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 88/446 (19%), Positives = 152/446 (34%), Gaps = 66/446 (14%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R ++ DVL R L G T + D+DD+ ++ +R ++
Sbjct: 342 WRRIVTLDVLRRTLSRSGGRP--TLAVGLADLDDRCLDASRAAG------RKCREYAAEA 393
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
+Q L P A + + + L + ++ G AYE + FD + YG
Sbjct: 394 REQVAALAESLGVADA-VFPLAGEAMDEAMALARKLMDKGLAYEKLRSVYFDVARDKAYG 452
Query: 164 SFSRRKIDEQKMGTRVPEKYH-KKNPADFILWKRST----PMEPGWESPWGRGRPGWHIE 218
+ + +G V + K +P DF L KR + W + WG RP W ++
Sbjct: 453 GLLGLDMTKLCLGKTVDLDSYAKDHPRDFTLLKRVSLKDLKAGDVWATAWGNVRPSWFLQ 512
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
++ + L V + D FPH EN A A +W+ G +
Sbjct: 513 MASAAVRALPAVTVV-ATDEDKTFPHIENLRAVW--AGGAGLAPAVWLVGGRIC-----G 564
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
+ T+ +LL G +R +L T Y +P+ + L E ++
Sbjct: 565 REGAEAVPTLADLL------GYGVHPLTVRAWLLSTSYHKPLCAAPEALAMWERNRARIQ 618
Query: 339 Q-----------------TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
+ ++ A+ +AL DL+ AL AR++
Sbjct: 619 ELAAGLTLAAGEGQPSGAAQAEAEGLEAALEAALAEDLSVAQFWPALFAFARQANAGLAA 678
Query: 382 LPIFNASAHIL-----------------GIEVCKEHLNKNISIAIEKLVQERLILLKMKK 424
+ A A G+ + H +L++ R K
Sbjct: 679 GTLGGADAARHLAALAAADAALGLLDPAGLPLSPPHW----PAEAARLIEARAQARAAKD 734
Query: 425 FSSADYIRKQLESKGFILEDYKNPDN 450
F+ AD +R+ +E+ G LED
Sbjct: 735 FTRADALRRDIEAMGLRLEDAPGGAR 760
>gi|25808818|gb|AAN73901.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 203
Score = 125 bits (313), Expect = 2e-26, Method: Composition-based stats.
Identities = 75/212 (35%), Positives = 111/212 (52%), Gaps = 17/212 (8%)
Query: 53 LYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTT 112
L R L E V VRN TDIDDKII +A +E N +I ++ + + +D
Sbjct: 1 LRRTLELSGYE--VVLVRNFTDIDDKIINKAFKE------NKSIQELSGIYIESYTRDLN 52
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKID 171
L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S
Sbjct: 53 ALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHNSS 112
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSH 225
+ + ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 113 MEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALA 170
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
DIH GG DL+FPHHENE Q+ C
Sbjct: 171 NTPYQIDIHAGGSDLLFPHHENEACQTRCTFG 202
>gi|303249135|ref|ZP_07335375.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
gi|302489460|gb|EFL49407.1| cysteine synthase [Desulfovibrio fructosovorans JJ]
Length = 767
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 84/443 (18%), Positives = 140/443 (31%), Gaps = 58/443 (13%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R ++ DVL R L G + V V + D++D+ ++ +R +K
Sbjct: 342 WRRVVTLDVLRRTL-ARGGGRPVLAV-GLADLEDRCLDASRAAGVK------CREFAAKA 393
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
Q L P A + + + + + ++ G AYE + FD + YG
Sbjct: 394 RDQVAARAAALGVADA-RFPLAGEALDEALAMTRKLMSKGLAYEKLRSVYFDVARDKAYG 452
Query: 164 SFSRRKIDEQKMGTRVPE-KYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIE 218
+ + +G V Y K NP DF L KR + +PWG RP W ++
Sbjct: 453 GLLGTDMTKLALGKTVDLLAYAKDNPQDFTLLKRVSLKDLKAGDALSTPWGNVRPSWFLQ 512
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+A + + D FPH EN A + + GR
Sbjct: 513 MAAAAV-KALPAVTVVLTDEDKTFPHLENLRAIWSVGAGLSP--------AAWLVGGRVA 563
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
+ + +R +L YR+P+ + L E ++
Sbjct: 564 GREGEEAG----AADLADLLALGVHPLAVRAWLLSVGYRKPLCAVPEALRMWEKNRNRVQ 619
Query: 339 QTSTSKGIIDPAVLSALY------------------NDLNTVSAIQALHKLAREST---- 376
+ + + G+I A +DL L R +
Sbjct: 620 ELAANLGLIAAGGGKASDTVAAEAEKLTQSLDAAVADDLAVFQFWPQLFAFCRFANGLIA 679
Query: 377 -------KNHDLLPIFNASAHILGIE--VCKEHLNKNISIAIEKLVQERLILLKMKKFSS 427
L ++ +LG+ C + + KLV R K F
Sbjct: 680 AGSLTPADAARLAGALGSADGVLGLLDPACLPVATREWPAPVAKLVAAREQARNAKDFGK 739
Query: 428 ADYIRKQLESKGFILEDYKNPDN 450
AD IR +E G+ +ED
Sbjct: 740 ADAIRSDIEGLGYRVEDAPGGAR 762
>gi|294921527|ref|XP_002778678.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239887397|gb|EER10473.1| cysteinyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 451
Score = 123 bits (309), Expect = 6e-26, Method: Composition-based stats.
Identities = 95/330 (28%), Positives = 137/330 (41%), Gaps = 66/330 (20%)
Query: 180 PEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
K++ DF LWK S EP WESPWG GRPGWHIECS M+S LG DIHGGG D
Sbjct: 10 DFGSEKRHRNDFALWKSSKRGEPSWESPWGLGRPGWHIECSVMASEVLGAHIDIHGGGSD 69
Query: 240 LIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
L FPHH+NEIAQS + N ++H G L+++G KMSKS NFITI + L
Sbjct: 70 LKFPHHDNEIAQSEAYHFNAQWVNYFLHAGHLHIKGLKMSKSLKNFITIRQAL------- 122
Query: 300 RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII------------ 347
+S+ A +R+ L+ + +PI+F+ Q + EA+ +++ +
Sbjct: 123 QSYTARQLRIMFLLQQWDKPINFSDQTIAEAKDKETRFNSFFNRVKELLRTRPPYSIRQK 182
Query: 348 -----------------DPAVLSALYNDLNTVSAIQALHKLARESTKN------------ 378
AV AL ++ NT A+ L +
Sbjct: 183 WEEESLDFAINEQIATAMAAVHEALCDNFNTSEAMTQLDNIVTAVNSYMVKSENPKATLI 242
Query: 379 HDLLPIFNAS---------AHILGIEVCKE-HLNKNISIAIEKLVQERLILL----KMKK 424
+ A +LG+ + +K +S + R L K
Sbjct: 243 QEAAQYVQKMLTIFGVTDNADVLGLSSGAQGEESKTLSNVLTAFASFREQLRSTAQADKN 302
Query: 425 ---FSSADYIRKQ-LESKGFILEDYKNPDN 450
D +R + + G LED + +
Sbjct: 303 KMLLQMCDDLRDETMVDLGVRLEDKPDGSS 332
>gi|323141394|ref|ZP_08076285.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
gi|322414143|gb|EFY04971.1| DALR domain protein [Phascolarctobacterium sp. YIT 12067]
Length = 214
Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats.
Identities = 51/220 (23%), Positives = 87/220 (39%), Gaps = 51/220 (23%)
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS GNF + ++LE + +R ++ THYR P+DF+ RLTEA+ L++
Sbjct: 1 MSKSLGNFFMVIDILE-------HYDPETLRFFIVSTHYRSPLDFSDARLTEAQKSLARL 53
Query: 338 PQTSTSKGIIDPA----------------------VLSALYNDLNTVSAIQALHKLARES 375
Q + G + + A+ +D NT AI + LA+E
Sbjct: 54 RQAQETLGELSEMLSAGPTAESLALREKVKELREAFMEAMRDDFNTALAISHMFALAKEI 113
Query: 376 TKNHDLL----------------PIFNASAHILGIE------VCKEHLNKNISIAIEKLV 413
H + +F + I+G+ +E + + +E L+
Sbjct: 114 NIYHKAVVDAGIKPDGKLVAMFNDVFAETCSIIGVLEKTAAPAAEEAGDSKEAELVEMLI 173
Query: 414 QERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
R K K ++ AD +R +L G +L+D +
Sbjct: 174 AMRQDARKNKNYALADELRNKLNEIGIVLQDTPQGVKWSK 213
>gi|302410221|ref|XP_003002944.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261357968|gb|EEY20396.1| cysteinyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 792
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 93/372 (25%), Positives = 146/372 (39%), Gaps = 63/372 (16%)
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+E + +T Q F D L L P R T ++PQ+ + I+ G
Sbjct: 186 KETVDTSDQTMFTDLTQSMEQLFFDDMDALNVLRPDVITRVTEYVPQIADFVARIVDKGF 245
Query: 145 AYEANNEIIFDTSSIP---------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
AYE++ + FD ++ G+ + + + E G K++ DF LWK
Sbjct: 246 AYESDGSVYFDITAFEKAGNTYARLRPGNRNDKSLQEDGEGALSKNLGEKRSDGDFALWK 305
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+S EP W S WG GRPGWHIECS M+S LG DIH GG+DL FPHH+NE+AQS
Sbjct: 306 KSKEGEPYWPSRWGNGRPGWHIECSVMASDILGAQMDIHSGGVDLAFPHHDNELAQSEAY 365
Query: 256 D-----RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLA 310
++H G L++ G KMSKS NF TI + L T + + +R+
Sbjct: 366 YCEQEKGEHTWVRHFLHMGHLSISGSKMSKSLKNFQTIQDALATN------YTSRSMRVV 419
Query: 311 MLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------------------------- 343
L+ + + ++ + + + +
Sbjct: 420 FLLGKWNDGVEISPDMRAQGASWETLVSNFFANIKARVLDQSSAPSEGVKSLSVSDDTPK 479
Query: 344 ------KGIIDPAVLSALYNDLNTVSAIQALHKLAREST---KNHDLLPIFNASAH---- 390
+ AL N +T A++ + L + + D + A A
Sbjct: 480 SGLAAELEKAKKEMHDALSNSFDTPQAMRIIQDLIGTANLQLADEDSVTTLEAIARWITQ 539
Query: 391 ---ILGIEVCKE 399
I G++ +
Sbjct: 540 IVGIFGLDENAQ 551
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 23/72 (31%), Positives = 43/72 (59%), Gaps = 3/72 (4%)
Query: 1 MKKKIKIYNTLE-RKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRY 59
M+ +K++N+L + F I+ + Y CGPTVYD +H+G+AR + D++ R++ +
Sbjct: 1 MES-LKVHNSLSPGQPVPFDPIEKGKVSWYACGPTVYDKSHLGHARNYVSTDIIRRIMMH 59
Query: 60 YYGEKCVTYVRN 71
Y + + +V N
Sbjct: 60 -YFKADLKFVMN 70
>gi|115401840|ref|XP_001216508.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
gi|114190449|gb|EAU32149.1| hypothetical protein ATEG_07887 [Aspergillus terreus NIH2624]
Length = 777
Score = 122 bits (305), Expect = 2e-25, Method: Composition-based stats.
Identities = 105/359 (29%), Positives = 152/359 (42%), Gaps = 52/359 (14%)
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY- 146
+ +T K ++F +D L LAP R T ++PQ++ ++ I+ +G Y
Sbjct: 198 MDSNNHKIYLELTQKFERRFFEDMNALNVLAPDQLTRVTEYVPQIVRFVEKIVANGFGYA 257
Query: 147 EANNEIIFDTSSIPNYGSFS---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ + FD S G R + G+ + K+N F LWK S
Sbjct: 258 TPDGSVYFDIDSFEKAGHNYSRLEPWNKNDRALQADGEGSLSKGRSMKRNENHFALWKAS 317
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP W SPWG GRPGWHIECSAM+S +GK DIH GG+DL FPHH+NE+AQS
Sbjct: 318 KPGEPAWPSPWGYGRPGWHIECSAMASEVIGKTIDIHSGGVDLRFPHHDNELAQSEAYWS 377
Query: 258 ----IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N +IH G L + G KMSKS N+ TI L + W A +R+ L+
Sbjct: 378 TPGCQVQWTNYFIHMGQLRIRGLKMSKSLKNYTTIRTFLSQ-----KEWSARSLRICFLL 432
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQ---------------TSTSKGIIDPAVLSALY-- 356
+++ I+ T + + K T GI D +L+AL
Sbjct: 433 MPWQDGIEITDELMKAVVSWEDKLNNFFLKSLDIWKSTKTATMQEPGIADQQLLNALDKA 492
Query: 357 ---------NDLNTVSAIQALHKLARESTKNHDLLPIFNASAH-------ILGIEVCKE 399
+ NT + ++ L L ES A I G++ +
Sbjct: 493 KADVDTALCDSFNTPAVMRILSDLVTESNSETPSDQTVILLARWVTCIVTIFGLDPEGD 551
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 24/62 (38%), Positives = 41/62 (66%), Gaps = 2/62 (3%)
Query: 3 KKIKIYNTLERKITEFQAIDP--SNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++KIYN+L R +F +DP + Y CGPTVY+ AH+G+A+ + D++ R+++ Y
Sbjct: 23 PRLKIYNSLTRTKNDFIPLDPTGKVVTWYGCGPTVYEDAHLGHAKNYVSTDIIRRIMQDY 82
Query: 61 YG 62
+G
Sbjct: 83 FG 84
>gi|197693882|gb|ACH71610.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (302), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ H+
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693880|gb|ACH71609.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (301), Expect = 4e-25, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ H+
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|325845903|ref|ZP_08169101.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325481809|gb|EGC84841.1| cysteine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 257
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 46/271 (16%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS LG+ D+H GG DL FPHHENEIAQS +K AN W+HNG + ++G KMSKS
Sbjct: 1 MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF T++++ + + V+R +L YR PI+FT + + +A+ L +
Sbjct: 60 LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112
Query: 342 TS----------------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ + +DLNT A+ L ++++ +
Sbjct: 113 FRMDDLLEKASGNLKDEEKDLLKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKL 172
Query: 380 D----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
D +F +LGIE K+ + I KL+ ER K K F+ AD
Sbjct: 173 DSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKAD 232
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR +L G I++D + T+W+ K
Sbjct: 233 EIRDKLSDMGIIIKDTR------EGTKWELK 257
>gi|197693884|gb|ACH71611.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|212695899|ref|ZP_03304027.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
7454]
gi|212677022|gb|EEB36629.1| hypothetical protein ANHYDRO_00432 [Anaerococcus hydrogenalis DSM
7454]
Length = 257
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 81/271 (29%), Positives = 123/271 (45%), Gaps = 46/271 (16%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
MS LG+ D+H GG DL FPHHENEIAQS +K AN W+HNG + ++G KMSKS
Sbjct: 1 MSKKLLGETIDLHAGGEDLQFPHHENEIAQSETRSG-KKFANYWMHNGMIQVDGTKMSKS 59
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GNF T++++ + + V+R +L YR PI+FT + + +A+ L +
Sbjct: 60 LGNFFTLHDI-------KKEYDLMVVRFWLLSAGYRLPINFTREIIEQAKNSLERLNNAK 112
Query: 342 TS----------------------KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH 379
+ + +DLNT A+ L ++++ +
Sbjct: 113 FRMDDLLEKASGNLKDEEKDLVKELDNFENNFRKVMDDDLNTADALTVLFEISKFANTKL 172
Query: 380 D----------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSAD 429
D +F +LGIE K+ + I KL+ ER K K F+ AD
Sbjct: 173 DSNSSKEFVEKTRALFIKLEDVLGIENRKKTDDSLDEDLINKLIDERKEAKKAKDFAKAD 232
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IR +L G I++D + T+W+ K
Sbjct: 233 EIRDKLSDMGIIIKDTR------EGTKWELK 257
>gi|197693930|gb|ACH71634.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (300), Expect = 5e-25, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSMHNSSMEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693892|gb|ACH71615.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ H+
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGTDLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693944|gb|ACH71641.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 120 bits (300), Expect = 6e-25, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693894|gb|ACH71616.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (299), Expect = 7e-25, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDS 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGTDLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693902|gb|ACH71620.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (299), Expect = 8e-25, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693954|gb|ACH71646.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693878|gb|ACH71608.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693934|gb|ACH71636.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693936|gb|ACH71637.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693938|gb|ACH71638.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693942|gb|ACH71640.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693922|gb|ACH71630.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693926|gb|ACH71632.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693920|gb|ACH71629.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 126/224 (56%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693900|gb|ACH71619.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (298), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693886|gb|ACH71612.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693896|gb|ACH71617.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 124/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++ + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSGIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693948|gb|ACH71643.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693960|gb|ACH71649.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|30961749|gb|AAP39991.1| cysteinyl-tRNA synthetase [Helicobacter acinonychis]
Length = 197
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 75/204 (36%), Positives = 110/204 (53%), Gaps = 15/204 (7%)
Query: 63 EKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
V VRN TDIDDKII +A +E N +I ++S + + +D L P+ +
Sbjct: 1 GYEVVLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLE 54
Query: 123 PRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S R+
Sbjct: 55 PKASEYLDAMVSMIETLLEKNIAYKVSNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGL 112
Query: 182 KYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHG 235
K+ DF+LWK + G++SP G+GRPGWHIECS+M DIH
Sbjct: 113 VQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALANTPYQIDIHA 172
Query: 236 GGLDLIFPHHENEIAQSCCADRIE 259
GG+DL+FPHHENE Q+ CA +E
Sbjct: 173 GGVDLLFPHHENEACQTRCAFGVE 196
>gi|317145384|ref|XP_003189699.1| hypothetical protein AOR_1_280144 [Aspergillus oryzae RIB40]
Length = 296
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 35/74 (47%), Positives = 47/74 (63%), Gaps = 3/74 (4%)
Query: 17 EFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
F A+DP + Y CGPTVYD AH+G+AR D++ R+L+ Y + V +V NITD
Sbjct: 5 PFIALDPKGRKVTWYACGPTVYDDAHLGHARNYASTDIIRRILKD-YFKFDVEFVMNITD 63
Query: 75 IDDKIIERARQEHP 88
+DDKII R Q+H
Sbjct: 64 VDDKIIVRGWQQHL 77
>gi|197693952|gb|ACH71645.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693888|gb|ACH71613.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 119 bits (297), Expect = 1e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693898|gb|ACH71618.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSIEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALTNTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693912|gb|ACH71625.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E S I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKESKS------IQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693918|gb|ACH71628.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N ++ ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S +R+ K+ D
Sbjct: 56 MVSMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M S DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMISKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693908|gb|ACH71623.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 124/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S +R+ K+ D
Sbjct: 56 MVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|312086706|ref|XP_003145183.1| cysteinyl tRNA synthetase 1 [Loa loa]
gi|307759655|gb|EFO18889.1| cysteinyl tRNA synthetase 1 [Loa loa]
Length = 470
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 93/351 (26%), Positives = 133/351 (37%), Gaps = 81/351 (23%)
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
+ E + + K+N DF LWK S EP W SPWG+GRPGWHIECSAMSS G
Sbjct: 3 NMRESEGDLSMGNLQSKRNVTDFALWKASKDGEPYWNSPWGKGRPGWHIECSAMSSKICG 62
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
DIH GG DL FPHH+NEIAQ IE N ++H G L + G KMSKS NFITI
Sbjct: 63 SSLDIHAGGFDLKFPHHDNEIAQVEAYYDIENWVNYFLHCGSLRIAGLKMSKSLKNFITI 122
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF---------TVQRLTEAEILLSKWPQ 339
E L + + A +R+ LM ++ + +D+ ++++ LL K
Sbjct: 123 REAL-------KHYSARQLRILFLMHNWNDVLDYSAASMERALQFEKISNEFFLLVKDYL 175
Query: 340 TSTSKGIIDPAVLSALYNDL---------------------NTVSAIQALHKLARESTKN 378
K + +L +T + I+ L +L
Sbjct: 176 RRHYKPNSSESYQKYDDGELLLVGNFSKIKTEINIALCDSVDTRTVIEKLRELIGIGNAY 235
Query: 379 -----------------HDLLPIFNASAHILGIEV-----------------------CK 398
++ I G+ +
Sbjct: 236 INEMEKKENCIPNCLLLRNIALYMTWLLKIFGVVPRNADIGFPIEENGVSNHCFSITSKE 295
Query: 399 EHLNKNISIAIEKLVQERLILLKMK---KFSSADYIRKQ-LESKGFILEDY 445
E L ++ ++ R + + K D +R + L G LED
Sbjct: 296 ELLMPYLTALVDFRENVRKVAREQKIIEILEECDKLRDEVLPELGVRLEDR 346
>gi|197693914|gb|ACH71626.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693906|gb|ACH71622.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|197693910|gb|ACH71624.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S +R+ K+ D
Sbjct: 56 MVSMIKTLLEKNIAYRISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693932|gb|ACH71635.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|300813898|ref|ZP_07094202.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
gi|300511961|gb|EFK39157.1| DALR domain protein [Peptoniphilus sp. oral taxon 836 str. F0141]
Length = 189
Score = 118 bits (296), Expect = 2e-24, Method: Composition-based stats.
Identities = 41/188 (21%), Positives = 72/188 (38%), Gaps = 34/188 (18%)
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI------------ 346
+ + ++R +L T YR PI+F+ + + + + L +
Sbjct: 2 SKEYDLEILRFFLLTTSYRAPINFSREVMNQTKNALERLYNAKYKLEKDIELSKERALTE 61
Query: 347 -----------IDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL----------LPIF 385
+ A+ +DLNT AI A+ L ++ N D + +
Sbjct: 62 DEKKIEEKFQTHRQSFEKAMEDDLNTADAITAIFDLVKDINVNLDENSAKKLLEEGMSLL 121
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
ILGI + +E ++ I L++ER K K F AD IR +L KG ++D
Sbjct: 122 KTLTKILGI-MEREKNCDDLDEEILNLIKEREDARKNKDFKRADEIRDELLEKGIEIKDT 180
Query: 446 KNPDNGQR 453
+ +R
Sbjct: 181 RKGIEWKR 188
>gi|197693946|gb|ACH71642.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVGMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693956|gb|ACH71647.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693950|gb|ACH71644.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 118 bits (295), Expect = 2e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 124/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E S I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKESKS------IQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S + + ++ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693890|gb|ACH71614.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E S I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKESKS------IQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693916|gb|ACH71627.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 125/224 (55%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S +R+ K+ D
Sbjct: 56 MVSMIKTLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFSRIALVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693940|gb|ACH71639.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 122/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E S I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKESKS------IQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693924|gb|ACH71631.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E S I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKAFKESKS------IQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDS 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNFAYQVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|197693904|gb|ACH71621.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 117 bits (294), Expect = 3e-24, Method: Composition-based stats.
Identities = 86/224 (38%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVRMIETLLEKNIAYRVSNGDIYLDTSKDKDYGSLSMHN--SSVEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|330946917|gb|EGH47752.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 165
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 36/167 (21%), Positives = 65/167 (38%), Gaps = 29/167 (17%)
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP--------AVLSALYNDLNTVSAIQ 366
HYR I+++ L E++ L ++ + +P +A+ +D T A
Sbjct: 2 HYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAFVERFSTAMNDDFGTPEACA 61
Query: 367 ALHKLARESTKNHD--------LLPIFNASAHILGIEVCKE-------HLNKNISIAIEK 411
L ++ RE + + L A +LG+ + + + +E
Sbjct: 62 VLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQLEADDFLRAGAEGRVDAAEVEA 121
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
L+Q RL K + +D IR Q+ + G +LED K T W+
Sbjct: 122 LIQARLAARAAKDWGESDRIRDQITAMGVLLEDGK------GGTTWR 162
>gi|213513600|ref|NP_001133392.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
gi|209153132|gb|ACI33145.1| Cysteinyl-tRNA synthetase, cytoplasmic [Salmo salar]
Length = 541
Score = 117 bits (292), Expect = 5e-24, Method: Composition-based stats.
Identities = 90/282 (31%), Positives = 130/282 (46%), Gaps = 20/282 (7%)
Query: 102 KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT----- 156
+ T L P R + + P+++ ++ I+ +G YE+N + FDT
Sbjct: 13 RMTDSPTYSVCNPQVLPPDVLTRVSEYCPEIVDFVKKILDNGFGYESNGSVYFDTAKFDT 72
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEK--------YHKKNPADFILWKRSTPMEPGWESPW 208
S YG + + K K++ DF LWK S P EP W+SPW
Sbjct: 73 SQKHAYGKLVPEAVGDMKALQEGEGDLSVSADQLSEKRSQNDFALWKASKPGEPSWDSPW 132
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
G+GRPGWHIECSAM+ LG+ DIHGGG DL FPHH+NE+AQS + ++H
Sbjct: 133 GKGRPGWHIECSAMAGSILGESMDIHGGGFDLRFPHHDNELAQSEAYFENDHWVRYFLHT 192
Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
G L + G KMSKS NFITI + L A +RLA LM +++ +D++ +
Sbjct: 193 GHLTIAGCKMSKSLKNFITIKDALAKNT-------ARQLRLAFLMHSWKDTLDYSSNTME 245
Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK 370
A + + I A +A L++
Sbjct: 246 SAVHYEKFLNEFFLNVKDILRAPCDVTGQFEKWEAAEMELNE 287
>gi|119384075|ref|YP_915131.1| cysteinyl-tRNA synthetase-like [Paracoccus denitrificans PD1222]
gi|119373842|gb|ABL69435.1| Cysteinyl-tRNA synthetase-like protein [Paracoccus denitrificans
PD1222]
Length = 124
Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 40/59 (67%)
Query: 3 KKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+ + N+L + F +P +R+YVCGPTVYD+AHIGNARP +VFDVL R+ R Y
Sbjct: 1 MALFLTNSLGGEKQPFIPRNPREVRIYVCGPTVYDYAHIGNARPAVVFDVLVRVFRLSY 59
>gi|289607157|emb|CBI60873.1| unnamed protein product [Sordaria macrospora]
Length = 114
Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 31/71 (43%), Positives = 46/71 (64%), Gaps = 3/71 (4%)
Query: 5 IKIYNTLERKITEFQAIDPSN-IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ ++N+L R F+ +DP +R+Y CGPTVY++AHIGN R + D L R+LR+
Sbjct: 46 LTLHNSLTRSPQRFEPLDPEKGVRVYSCGPTVYNYAHIGNLRAYVFTDTLSRVLRWKGY- 104
Query: 64 KCVTYVRNITD 74
+T+V NITD
Sbjct: 105 -ALTHVINITD 114
>gi|167540088|ref|XP_001733555.1| cysteinyl-tRNA synthetase, cytoplasmic [Entamoeba dispar SAW760]
gi|165893955|gb|EDR22070.1| cysteinyl-tRNA synthetase, cytoplasmic, putative [Entamoeba dispar
SAW760]
Length = 405
Score = 116 bits (291), Expect = 7e-24, Method: Composition-based stats.
Identities = 94/224 (41%), Positives = 118/224 (52%), Gaps = 2/224 (0%)
Query: 73 TDIDDK-IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TD+ K + R ++ I + +A K + F D L P R T IP+
Sbjct: 125 TDVIGKYLDIRQKESVDPIEMKEAARAHARKYEELFFADCDALGIRRPDVISRVTEFIPE 184
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+I IQ II +G+AYE+N + FDT+S G R P K N DF
Sbjct: 185 VIAFIQKIIDNGYAYESNGSVYFDTASFRKAGMTYGRLEPWSVGDVDAPADGEKHNKNDF 244
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
LWK+S EP WES WG GRPGWHIECSAM+S+ G DIH GG DL FPHHENE+AQ
Sbjct: 245 ALWKKSKAGEPSWESQWGPGRPGWHIECSAMASNVFGDTLDIHSGGEDLKFPHHENELAQ 304
Query: 252 SCCADR-IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
S E ++H G L++ G KMSKS NFI N+LL+
Sbjct: 305 SEAYFNKKESWVRYFLHTGHLHINGLKMSKSLKNFIPSNKLLKN 348
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 20/74 (27%), Positives = 32/74 (43%), Gaps = 1/74 (1%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
+H+G+AR + D+ R+L Y V NITD+DDKII +AR+
Sbjct: 1 SHLGHARTYLSTDIFRRILED-YFGYQVIQCMNITDVDDKIILKARKNLLISKYCTTTPK 59
Query: 99 ITSKNTQQFVKDTT 112
+ + +
Sbjct: 60 VNDDTIKMMKEAWN 73
>gi|197693928|gb|ACH71633.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 116 bits (291), Expect = 7e-24, Method: Composition-based stats.
Identities = 85/224 (37%), Positives = 123/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+++I+ ++ AY +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVHMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M + DIH GG DL+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
HENE Q+ C +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HENEACQTRCTFGVE-IAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|325066743|ref|ZP_08125416.1| cysteinyl-tRNA synthetase [Actinomyces oris K20]
Length = 229
Score = 116 bits (290), Expect = 8e-24, Method: Composition-based stats.
Identities = 99/236 (41%), Positives = 144/236 (61%), Gaps = 18/236 (7%)
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
++F L APT++PRAT HIP+MI L+Q ++ GHAY + + +D S+P
Sbjct: 1 FEREFDAAYRALGVDAPTYEPRATGHIPEMIDLVQRLLDAGHAYVGESGNVYYDVRSLPG 60
Query: 162 YGSFSRRKIDE-----QKMGTRVPEKYHKKNPADFILWKRSTPMEPG---WESPWGRGRP 213
YGS + +++++ + + K++P DF LWK + P EP W++PWGRGRP
Sbjct: 61 YGSLTNQRLEDLATTEDESQLDDDVEADKRDPRDFALWKAAKPTEPADAAWDAPWGRGRP 120
Query: 214 GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
GWH+ECS MS YLG+ FDIHGGG+DL FPHHENE AQS A A W+HN ++ +
Sbjct: 121 GWHLECSTMSRRYLGETFDIHGGGIDLRFPHHENEQAQSHGAGWG--FARHWVHNAWVTI 178
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE 329
+G KMSKS GN + + ELL + + A V+RLA+ H+R ++F+ + L +
Sbjct: 179 KGEKMSKSLGNSLVVAELL-------KRYDAAVLRLALGTVHHRSTVEFSEETLAD 227
>gi|302508593|ref|XP_003016257.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
gi|291179826|gb|EFE35612.1| hypothetical protein ARB_05655 [Arthroderma benhamiae CBS 112371]
Length = 1165
Score = 116 bits (290), Expect = 1e-23, Method: Composition-based stats.
Identities = 105/425 (24%), Positives = 160/425 (37%), Gaps = 78/425 (18%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+T +F++D L L P RAT++IP++I I+ II +G AY ++ I+
Sbjct: 60 FRTLTRNFETRFLEDMRFLNVLDPDELTRATSYIPEIIQFIEKIIDNGFAYSTSDGSIYF 119
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN----------PADFILWKRSTPMEPGWE 205
K++ + ++ + + DF LW S EP W
Sbjct: 120 NIDKFANAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWNASRAGEPSWP 179
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
PWG GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+ Q + N +
Sbjct: 180 GPWGNGRPGWHIECSAMASATLGSQIDIHSGGIDLAFPHHDNELPQGEAYWGETQWVNYF 239
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQ 325
+H G L++ G KMSKS NF I L + RS +R+ L+ +RE I+ T
Sbjct: 240 LHMGHLSIHGSKMSKSLKNFTAIGGALAKGTWTSRS-----VRIVFLLGRWREGIEITTD 294
Query: 326 RLTEAEILLSKWPQTSTSKGIIDP---------------AVLSALYNDLNTV-------- 362
+ A +K I S D+
Sbjct: 295 MVNAARSWEAKLDNFFLKARNIAEGARWVTSMMNIFGLNGHASPDNPDIGWAGIDVPEYA 354
Query: 363 ----SAIQALHKLARESTKNHDLL--PIFNASAHILGIEVCKEHLNKNISI-AIEKLVQE 415
+ + AL R K++ + + + +G H ++++ +E L
Sbjct: 355 KPYLNTLSALRDAVRRLAKSNAHITSQALGSIINTIGSSADLGHSMSDLALPYVEVL--- 411
Query: 416 RLILLKMKK-----------------------FSSADYIRK-QLESKGFILEDYKNPDNG 451
K+K + D IR + G LED +
Sbjct: 412 ----RKLKDQIASLIASLNIGTTEVDPNQLLRY--CDRIRDVDILDLGIYLEDEDSGCAI 465
Query: 452 QRMTR 456
R
Sbjct: 466 IRPVT 470
>gi|197693958|gb|ACH71648.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 217
Score = 114 bits (285), Expect = 3e-23, Method: Composition-based stats.
Identities = 84/224 (37%), Positives = 121/224 (54%), Gaps = 16/224 (7%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
TDIDDKII +A +E N +I ++S + +D L P+ +P+A+ ++
Sbjct: 2 FTDIDDKIINKALKE------NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDA 55
Query: 132 MIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M+ +I+ ++ AY+ +N +I DTS +YGS S R+ K+ D
Sbjct: 56 MVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQD 113
Query: 191 FILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPH 244
F+LWK + G++SP G+GRPGWHIECS+M DIH GG +L+FPH
Sbjct: 114 FVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPYQIDIHAGGAELLFPH 173
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
H NE Q+ CA +E A W+HNGF+N+ KMSKS GN I
Sbjct: 174 HGNEACQTRCAFGVE-LAKYWMHNGFVNINNEKMSKSLGNSFFI 216
>gi|207109337|ref|ZP_03243499.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
Length = 65
Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 31 CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
CGPTVYD AH+G+AR I FD+L R L E V VRN TDIDDKII +A +E+ SI
Sbjct: 2 CGPTVYDDAHLGHARSAIAFDLLRRTLELSGYE--VVLVRNFTDIDDKIINKALKENKSI 59
Query: 91 PINDAI 96
+I
Sbjct: 60 QELSSI 65
>gi|153824052|ref|ZP_01976719.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
gi|126518424|gb|EAZ75647.1| cysteinyl-tRNA synthetase [Vibrio cholerae B33]
Length = 159
Score = 110 bits (276), Expect = 3e-22, Method: Composition-based stats.
Identities = 33/165 (20%), Positives = 59/165 (35%), Gaps = 29/165 (17%)
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVSAIQALH 369
++++ + L +A L + +A+ +D NT A L
Sbjct: 1 QLNYSEENLNQARASLERLYNALRGLDRSVPAAGGEEYVTRFTAAMNDDFNTPEAYSVLF 60
Query: 370 KLARESTK--------NHDLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQE 415
+ARE + L + A ++GI + + IE L++
Sbjct: 61 DMAREINRLKSEDMTNASALGSLMRELADVIGILYQEPEAFFQGSAEDEDAAQIEALIKL 120
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
R K +++AD R +L G +LED N T W++K
Sbjct: 121 RNDSRATKDWANADLARDKLNEMGIVLEDGPN------GTTWRRK 159
>gi|332703394|ref|ZP_08423482.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
gi|332553543|gb|EGJ50587.1| cysteine synthase [Desulfovibrio africanus str. Walvis Bay]
Length = 779
Score = 110 bits (276), Expect = 4e-22, Method: Composition-based stats.
Identities = 84/489 (17%), Positives = 159/489 (32%), Gaps = 60/489 (12%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
++ +++ + + + + ++ GP++ + + R +++ DVL R LR
Sbjct: 306 QQGLRVRDLASGQARVLEPGKAG-LGLFTPGPSLDQASDLEVWRRVVLLDVLCRHLRANG 364
Query: 62 GEKCVTYVRNITDIDDKIIERA---------RQEHPSIPINDAISIITSKNTQQFVKDTT 112
V+ +A R + + ++
Sbjct: 365 -------VQ----------AKACVGLADLDDRALAAARAAGMPRREFARRTREEIQGLAA 407
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDE 172
L H A + + L + ++ G AYE + +D YG ++
Sbjct: 408 MLGVSEDVHFALAGESTERALTLCRRLLARGLAYEKLRSVYYDVLRDKAYGQTGSMDLER 467
Query: 173 QKMGTRVP-EKYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+G V Y K NP DF L KR T E+ WG+ RP W ++ +A + L
Sbjct: 468 LSLGKTVDLRDYVKDNPRDFTLLKRVTLQDLKAGDALETEWGKVRPSWFLQQAAAALDGL 527
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
+ G FPH EN A + TA + + + + + G
Sbjct: 528 PA-LSVALGAETHRFPHLENFRAIWTLGAGVVPTA-WLVAQPVIGVLDSAGADAPGVQQP 585
Query: 288 INELLETKKFGGRS------------WPAPVIR-LAMLMTHYREPIDFTVQRLTEAEILL 334
+ L E ++ L M ++R+ + V +
Sbjct: 586 VFGLREAVGAVSSGAALRMWLLSTSYHKPLSLQSLPMWSRNWRKTQELYVTLSSAERKKG 645
Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL-----------LP 383
+ + + + +A+ +DL+ L K R + L
Sbjct: 646 EPGQAVAQAAYDLRQGLFAAVEDDLSLHRFWPELFKFVRTINAKLAVGQLSGAGTELCLR 705
Query: 384 IFNASAHILGIEVCKEH--LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFI 441
A +LGI + ++ + +LV+ R K F AD +R +L KG+
Sbjct: 706 RLTACDQVLGILDHSQAPVSPSMLTAELAELVRLREEARGRKDFPQADDLRGRLWEKGYR 765
Query: 442 LEDYKNPDN 450
LED +
Sbjct: 766 LEDTPSGPR 774
>gi|283853744|ref|ZP_06370971.1| cysteine synthase [Desulfovibrio sp. FW1012B]
gi|283570868|gb|EFC18901.1| cysteine synthase [Desulfovibrio sp. FW1012B]
Length = 767
Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats.
Identities = 85/441 (19%), Positives = 146/441 (33%), Gaps = 58/441 (13%)
Query: 44 ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKN 103
R ++ DVL R L G T + D++D+ ++ AR
Sbjct: 342 WRRVVTLDVLRRALSR--GPARPTLAVGLADLEDRSLDAARAAG------QKCRDFAEA- 392
Query: 104 TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYG 163
+ V L ++ P A + + + L + ++ G AYE + FD + YG
Sbjct: 393 ARTRVAGYAGLLGVSGAVFPLAGEALDEALALTRKLMGKGLAYEKLRSVYFDVARDKAYG 452
Query: 164 SFSRRKIDEQKMGTRVPE-KYHKKNPADFILWKRST----PMEPGWESPWGRGRPGWHIE 218
+ + +G V Y K NP DF L KR + + WG RP W ++
Sbjct: 453 RLLGTDMTKLALGKTVDLLAYAKDNPQDFTLLKRVSLKDLKAGDALATTWGNVRPSWFLQ 512
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+A ++ + D FPH EN A A W+ G +
Sbjct: 513 MAAAAA-QALPAVTVVLTDEDKTFPHLENLRAIW--AVGAGLAPAAWLAGGRVTGRDGPE 569
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
+K+ + +LL +R +L Y +P+ L E +
Sbjct: 570 AKAP----VLGDLLAL------GVHPLTVRAWLLSIGYHKPLAAAPDALRMWERNRGRVQ 619
Query: 339 QTSTSKGIIDPAVLSALYN------------------DLNTVSAIQALHKLAREST---- 376
+ + + G+I +A DL+ L R +
Sbjct: 620 ELAANLGLIPEGRGAASDAVETEAGGLGEALAAAVADDLSVFQFWPRLFAFCRFANGRLS 679
Query: 377 -------KNHDLLPIFNASAHILGIEVCK--EHLNKNISIAIEKLVQERLILLKMKKFSS 427
LL + +LG+ + A +LV ER + + F+
Sbjct: 680 AGRLPGADAARLLRALTEADAVLGLLDPARLPVPGEAWPEAAARLVAERTRAREARDFAR 739
Query: 428 ADYIRKQLESKGFILEDYKNP 448
AD +R ++E G+ +ED
Sbjct: 740 ADALRAEIEGLGYRVEDTAEG 760
>gi|242036955|ref|XP_002465872.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
gi|241919726|gb|EER92870.1| hypothetical protein SORBIDRAFT_01g047370 [Sorghum bicolor]
Length = 94
Score = 109 bits (273), Expect = 7e-22, Method: Composition-based stats.
Identities = 26/65 (40%), Positives = 36/65 (55%), Gaps = 10/65 (15%)
Query: 3 KKIKIYNTLERKITEFQAI----------DPSNIRMYVCGPTVYDFAHIGNARPMIVFDV 52
++K++N++ R+ FQ + MYVCG T YDF H+GN R +VFDV
Sbjct: 8 PQLKLFNSMTRRKEPFQPASSRKEPFQPAVDGKVTMYVCGVTPYDFCHMGNGRAFVVFDV 67
Query: 53 LYRLL 57
LYR L
Sbjct: 68 LYRYL 72
>gi|313611176|gb|EFR85996.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-208]
Length = 125
Score = 108 bits (270), Expect = 2e-21, Method: Composition-based stats.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 11/123 (8%)
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHI 391
+ A + +D NT +AI H+LA+ + + L + A +
Sbjct: 3 QLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSINVLREFLSMMRLFAEV 62
Query: 392 LGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
LG+++ + +E L++ERL + F+ AD IR L+ K ILED
Sbjct: 63 LGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRDILKEKNIILEDTAQGTRF 122
Query: 452 QRM 454
+R
Sbjct: 123 RRG 125
>gi|195374027|ref|XP_002046047.1| GM15123 [Drosophila sechellia]
gi|194123235|gb|EDW45278.1| GM15123 [Drosophila sechellia]
Length = 256
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 83/228 (36%), Positives = 113/228 (49%), Gaps = 20/228 (8%)
Query: 139 IILHGHAYEANNEIIFD-----TSSIPNYGSFSRRKIDEQKMGTRVPEK--------YHK 185
II +G AY ANN + FD +Y + K K
Sbjct: 1 IIDNGLAYAANNSVYFDVNGFDKREKHHYAKLVPEAYGDTKSLQEGEGDLSVAEDRLSEK 60
Query: 186 KNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
++ DF LWK S EP W+SPWG+GRPGWHIECSAM+S G FDIH GG+DL FPHH
Sbjct: 61 RSANDFALWKASKAGEPWWDSPWGKGRPGWHIECSAMASDIFGSTFDIHTGGVDLKFPHH 120
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
+NE+AQS A + ++H G L + G KMSKS NF+TI E L + A
Sbjct: 121 DNELAQSEAAFNESEWVKYFLHTGHLTIAGCKMSKSLKNFVTIQEAL-------KKHSAT 173
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLS 353
+RLA L+ +++ +D++ + A + + + VLS
Sbjct: 174 QLRLAFLLHSWKDTLDYSENTMEMATQYEKFLNEFFLNVKDLTRHVLS 221
>gi|289447749|ref|ZP_06437493.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
gi|289420707|gb|EFD17908.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
Length = 272
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
G + + P + K + D +LW+ + P EP W SP+G GRPGWH
Sbjct: 29 QFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWH 88
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
+EC+A++ +G DI GGG DLIFPHHE A + C + A ++H G + +G
Sbjct: 89 VECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGH 148
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS GN + ++ L + +RL +L HYR ++ Q L EA L +
Sbjct: 149 KMSKSRGNLVLVSAL------RAQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHR 202
Query: 337 WPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLP---IFN 386
W + + + V L +DL+T AI AL ++ + HD +
Sbjct: 203 WRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVAT 262
Query: 387 ASAHILGIEV 396
A +LG+++
Sbjct: 263 AIDALLGVDL 272
>gi|260187118|ref|ZP_05764592.1| cysteinyl-tRNA synthetase [Mycobacterium tuberculosis CPHL_A]
Length = 278
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 76/250 (30%), Positives = 117/250 (46%), Gaps = 16/250 (6%)
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
G + + P + K + D +LW+ + P EP W SP+G GRPGWH
Sbjct: 35 QFGYESGYDRDTMLRLCEERGGDPRRPGKSDELDALLWRAARPGEPSWPSPFGPGRPGWH 94
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
+EC+A++ +G DI GGG DLIFPHHE A + C + A ++H G + +G
Sbjct: 95 VECAAIALSRIGSGLDIQGGGSDLIFPHHEFTAAHAECVSGERRFARHYVHAGMIGWDGH 154
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
KMSKS GN + ++ L + +RL +L HYR ++ Q L EA L +
Sbjct: 155 KMSKSRGNLVLVSAL------RAQDVEPSAVRLGLLAGHYRADRFWSQQVLDEATARLHR 208
Query: 337 WPQTS-----TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN--HDLLP---IFN 386
W + + + V L +DL+T AI AL ++ + HD +
Sbjct: 209 WRTATALPAGPAAVDVVARVRRYLADDLDTPKAIAALDGWVTDAVEYGGHDAGAPKLVAT 268
Query: 387 ASAHILGIEV 396
A +LG+++
Sbjct: 269 AIDALLGVDL 278
>gi|313585670|gb|ADR70977.1| CysS [Helicobacter pylori]
gi|313585682|gb|ADR70983.1| CysS [Helicobacter pylori]
Length = 185
Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L E V VRN TDIDDKII +A +E N +I ++S + + +D L
Sbjct: 2 LELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNV 53
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 54 KKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIE 111
Query: 176 GTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGK 229
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 112 FGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPY 171
Query: 230 VFDIHGGGLDLIFP 243
DIH GG DL+FP
Sbjct: 172 QIDIHAGGADLLFP 185
>gi|313585672|gb|ADR70978.1| CysS [Helicobacter pylori]
Length = 185
Score = 107 bits (266), Expect = 5e-21, Method: Composition-based stats.
Identities = 68/194 (35%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L E V VRN TDIDDKII +A +E N +I ++S + + +D L
Sbjct: 2 LELSGYE--VVLVRNFTDIDDKIINKALKE------NKSIQELSSIYIESYTRDLNALNV 53
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 54 KKPSLEPKASEYLDAMVGMIETLLEKNIAYQVSNGDIYLDTSKDKDYGSLSVHN--SSIE 111
Query: 176 GTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSH-----YLGK 229
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 112 FGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFETLALTNTPY 171
Query: 230 VFDIHGGGLDLIFP 243
DIH GG DL+FP
Sbjct: 172 QIDIHAGGADLLFP 185
>gi|225464766|ref|XP_002265714.1| PREDICTED: hypothetical protein [Vitis vinifera]
Length = 58
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 22/53 (41%), Positives = 36/53 (67%)
Query: 4 KIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRL 56
++++YNT+ ++ F+ + + MYVCG T YD +H+G+AR + FDVLYR
Sbjct: 6 ELRVYNTMTQQKEIFKPVVDGKVSMYVCGVTAYDLSHLGHARAAVCFDVLYRF 58
>gi|313585674|gb|ADR70979.1| CysS [Helicobacter pylori]
gi|313585678|gb|ADR70981.1| CysS [Helicobacter pylori]
gi|313585684|gb|ADR70984.1| CysS [Helicobacter pylori]
Length = 185
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 103/194 (53%), Gaps = 17/194 (8%)
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L + E V VRN TDIDDKII +A +E N +I ++S + + +D L
Sbjct: 2 LEWSGYE--VMLVRNFTDIDDKIINKAFKE------NKSIQELSSIYIESYTRDLNALNV 53
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +YGS S +
Sbjct: 54 KKPSLEPKASEYLDAMVSMIETLLEKNFAYRVSNGDIYLDTSKDKDYGSLSMHNSSVEFS 113
Query: 176 GTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAM-----SSHYLGK 229
+ ++ K+ DF+LWK + G++SP G+GRPGWHIECS+M +
Sbjct: 114 RIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFETLALANAPY 171
Query: 230 VFDIHGGGLDLIFP 243
DIH GG DL+FP
Sbjct: 172 QIDIHAGGADLLFP 185
>gi|239610479|gb|EEQ87466.1| cysteinyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
Length = 279
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 44/216 (20%), Positives = 69/216 (31%), Gaps = 39/216 (18%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K+YN+L R F DP + Y CGPTVYD AH+G+ R + D++ R+++ Y
Sbjct: 22 SPLKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDY 81
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
+ II RARQ+H + D +
Sbjct: 82 FHFN--------------IIVRARQQHL-------------------ISDYVAKHPVVDD 108
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
H + A E+ + + ++ + VP
Sbjct: 109 HVVKTARMAFSAFLKGVAPKADEEQTTAIGELQPSSEDFYGICEDAFLVYLDEVARSSVP 168
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
H F +P SP G+ P H
Sbjct: 169 NDDHS----IFSRAMEPERQKPSERSPEGQAGPARH 200
>gi|207109052|ref|ZP_03243214.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
Length = 242
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 83/244 (34%), Positives = 127/244 (52%), Gaps = 17/244 (6%)
Query: 103 NTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPN 161
+ + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I DTS +
Sbjct: 1 YIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDIYLDTSKDKD 60
Query: 162 YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECS 220
YGS S R+ K+ DF+LWK + G++SP G+GRPGWHIECS
Sbjct: 61 YGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECS 118
Query: 221 AMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
+M DIH GG DL+FPHHENE Q+ CA +E A W+HNGF+N+
Sbjct: 119 SMIFKTLALTNTPYQIDIHAGGADLLFPHHENEACQTRCAFGVE-LAKYWMHNGFVNINN 177
Query: 276 RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
KMSKS GN I + L +++ ++R +L HYR ++F + L ++ L
Sbjct: 178 EKMSKSLGNSFFIKDAL-------KNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLD 230
Query: 336 KWPQ 339
K +
Sbjct: 231 KIYR 234
>gi|326473872|gb|EGD97881.1| hypothetical protein TESG_05385 [Trichophyton tonsurans CBS 112818]
Length = 306
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 3/88 (3%)
Query: 3 KKIKIYNTLERKITEFQAID--PSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
++I+++L R T F +D ++ + CGPTVYD A G+AR ++ D+ R++R
Sbjct: 24 PPLRIWSSLTRSETAFIPVDYVGKSVTWHTCGPTVYDNAQSGHARNYVITDIPPRIMRD- 82
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
Y + V ++ NI D+DDK+I R RQ+H
Sbjct: 83 YFKFNVKFIMNIADVDDKVISRVRQQHL 110
>gi|90076574|dbj|BAE87967.1| unnamed protein product [Macaca fascicularis]
Length = 230
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 70/165 (42%), Positives = 92/165 (55%), Gaps = 7/165 (4%)
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
K++P DF LWK S P EP W PWG+GRPGWHIECSAM+ LG DIHGGG DL F
Sbjct: 51 SEKRSPNDFALWKASKPGEPSWPCPWGKGRPGWHIECSAMAGTLLGASMDIHGGGFDLRF 110
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHH+NE+AQS + ++H G L + G KMSKS NFITI + L +
Sbjct: 111 PHHDNELAQSEAYFENDCWVRYFLHTGHLTIAGCKMSKSLKNFITIKDAL-------KKH 163
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
A +RLA LM +++ +D++ + A + + I
Sbjct: 164 SARQLRLAFLMHSWKDTLDYSSNTMESALQYEKFLNEFFLNVKDI 208
>gi|313585680|gb|ADR70982.1| CysS [Helicobacter pylori]
Length = 185
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 100/194 (51%), Gaps = 17/194 (8%)
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L E V VRN TDIDDKII +A +E N ++ ++S + + +D L
Sbjct: 2 LELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNV 53
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 54 KKPSLEPKASEYLDTMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIE 111
Query: 176 GTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGK 229
R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 112 FGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMIFKTLALTDTPY 171
Query: 230 VFDIHGGGLDLIFP 243
DIH GG DL+FP
Sbjct: 172 QIDIHAGGADLLFP 185
>gi|145630617|ref|ZP_01786396.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
gi|144983743|gb|EDJ91193.1| cysteinyl-tRNA synthetase [Haemophilus influenzae R3021]
Length = 98
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSS 427
++ K + L ILG+ + + IE L+++R K +++
Sbjct: 12 DAEKANGLAARLRELGAILGLLQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWAT 71
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD R +L + G +LED N T W+++
Sbjct: 72 ADAARNELTAMGIVLEDGPN------GTTWRKQ 98
>gi|313585676|gb|ADR70980.1| CysS [Helicobacter pylori]
Length = 185
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 67/194 (34%), Positives = 101/194 (52%), Gaps = 17/194 (8%)
Query: 57 LRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLAC 116
L E V VRN TDIDDKII +A +E N ++ ++S + + +D L
Sbjct: 2 LELSGYE--VMLVRNFTDIDDKIINKALKE------NKSVQELSSIYIESYTRDLNALNV 53
Query: 117 LAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
P+ +P+A+ ++ M+ +I+ ++ AY+ +N +I DTS +YGS S
Sbjct: 54 KKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGDIYLDTSKDKDYGSLSVHN--SSIE 111
Query: 176 GTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRGRPGWHIECSAMSSHY-----LGK 229
+R+ K+ DF+LWK + G++SP G+GRPGWHIECS+M
Sbjct: 112 FSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGKGRPGWHIECSSMVFKTLALTDTPY 171
Query: 230 VFDIHGGGLDLIFP 243
DIH GG DL+FP
Sbjct: 172 QIDIHAGGADLLFP 185
>gi|322787495|gb|EFZ13583.1| hypothetical protein SINV_12569 [Solenopsis invicta]
Length = 159
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 64/147 (43%), Positives = 88/147 (59%), Gaps = 7/147 (4%)
Query: 183 YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
KK+ DF LWK S EP W+SPWGRGRPGWHIECS M+S G DIH GG+DL F
Sbjct: 11 SEKKSVTDFALWKSSKSGEPWWDSPWGRGRPGWHIECSVMASTICGDSLDIHTGGVDLKF 70
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
PHH+NE+AQ+ ++H+G L + G KMSKS NF+TI E L + +
Sbjct: 71 PHHDNELAQAEAYYGNSDWVKYFLHSGHLTIAGCKMSKSLKNFVTIQEAL-------KKY 123
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTE 329
+ +RLA L+ +++ +D++ +
Sbjct: 124 SSRQLRLAFLLHSWKDTLDYSDNTMNM 150
>gi|331243229|ref|XP_003334258.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309313248|gb|EFP89839.1| cysteinyl-tRNA synthetase [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 822
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 31/113 (27%), Positives = 49/113 (43%), Gaps = 18/113 (15%)
Query: 2 KKKIKIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
+++YN+L + F +P+ I + D+L R+ R Y
Sbjct: 21 SSNLRVYNSLTKSKVPFIPKEPNKITW-----------------NYVTQDILRRIARD-Y 62
Query: 62 GEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRL 114
V +V N+TDIDDKII+RARQ+H + +IT + T Q +
Sbjct: 63 FAYDVKFVMNVTDIDDKIIQRARQQHLLENLRSKADLITPELTDQVRQSLESY 115
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 75/357 (21%), Positives = 120/357 (33%), Gaps = 59/357 (16%)
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+I + + + F D L P+ R ++++ +++ +Q I+ G AY
Sbjct: 206 GSTITDHAIFKKLAVYWEKSFFDDMATLGVEPPSVLTRVSDYVEEIVEYVQKIVERGFAY 265
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGT--------------------------RVP 180
+ FD ++
Sbjct: 266 VHEGSVYFDVNAFDGAEVKDHPSQQTFSHCYAKLQPGSKANKKLMEEGEGALSVNPASST 325
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
K++PADF LWK+S P EPGW+S WG GRPGWHIECS M+S LG DIH GG+DL
Sbjct: 326 ATDVKRSPADFALWKKSKPGEPGWQSVWGMGRPGWHIECSVMASAILGDGMDIHSGGVDL 385
Query: 241 IFPHHENEIAQSCCADRIEK--TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFG 298
+FPHH+NE+AQS A + + +L +
Sbjct: 386 MFPHHDNEMAQSEDALKQHSARQLRLSFIAQRWDLGMDFAESAMAEVRNQESTFNNFFAV 445
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
+ +R + ID + + +AL +
Sbjct: 446 VK-----ALRYERSTEQMIQAIDLDQSKSVDTSH------PLHAIFENARSDFHAALCDS 494
Query: 359 LNTVSAIQALHKLARESTKNHD--------------------LLPIFNASAHILGIE 395
NT A++ L L E+ K + + + G++
Sbjct: 495 FNTPEAMKQLLNLVTETNKYISAQIASIRAEPDGQSLLVISHIAAWISKMLRVFGLD 551
>gi|270641735|ref|ZP_06222128.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
gi|270317337|gb|EFA28877.1| cysteine--tRNA ligase [Haemophilus influenzae HK1212]
Length = 91
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 21/93 (22%), Positives = 39/93 (41%), Gaps = 12/93 (12%)
Query: 374 ESTKNHDLLPIFNASAHILGIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSS 427
++ K + L ILG+ + + IE L+++R K +++
Sbjct: 5 DAEKANGLAARLRELGAILGLLQQDPEKFLQAGSDDDEVAKIEALIKQRNEARAAKDWAT 64
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
AD R +L + G +LED G T W+++
Sbjct: 65 ADAARNELTAMGIVLED------GANGTTWRKQ 91
>gi|269468022|gb|EEZ79747.1| cysteinyl-tRNA synthetase [uncultured SUP05 cluster bacterium]
Length = 118
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 27/117 (23%), Positives = 43/117 (36%), Gaps = 19/117 (16%)
Query: 356 YNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEVCK-----EHLN 402
+D NT A+ L +LA+ D L + +GI +
Sbjct: 7 DDDFNTPIALSILFELAKAVNLQRDQDIDQANALSQLLQKLGSYIGILQTDADSFLKRGV 66
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
I+ +++R K F+ +D IR +L G ILED N T W++
Sbjct: 67 DLADEDIDAKIKQRDEAKANKDFALSDQIRDELTKLGIILEDSAN------GTSWRR 117
>gi|332708899|ref|ZP_08428870.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
gi|332352441|gb|EGJ32010.1| cysteinyl-tRNA synthetase [Lyngbya majuscula 3L]
Length = 201
Score = 104 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 43/205 (20%), Positives = 68/205 (33%), Gaps = 55/205 (26%)
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP-------------------------- 338
+RL +LM YR+P+DFT + A
Sbjct: 1 MAVRLFVLMAQYRKPVDFTDDAIASATNGWQTLKEGLLFGHNYGIQLGWQDQSATPKPSQ 60
Query: 339 --QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL-------------- 382
Q S I A+ +DLN + L ++A+ + ++L
Sbjct: 61 PLQDDLSNKTIAQQFQEAVDDDLNFAGGLAVLFEVAKGLRREGNILVHQGKTETPASELE 120
Query: 383 ---PIFNASAHILGIEVCKEH-----LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
A +LG+E E + IE L+Q+R K K F +D IR
Sbjct: 121 QQWRSLVELAEVLGLEAQPEEEAEVSTDGLSDGEIEALIQQRAEARKTKNFELSDRIRDD 180
Query: 435 LESKGFILEDYKNPDNGQRMTRWKQ 459
L+++G L D +T W +
Sbjct: 181 LQAQGITLIDQGGG-----VTTWHR 200
>gi|327349091|gb|EGE77948.1| hypothetical protein BDDG_00885 [Ajellomyces dermatitidis ATCC
18188]
Length = 284
Score = 104 bits (258), Expect = 5e-20, Method: Composition-based stats.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 16/88 (18%)
Query: 3 KKIKIYNTLERKITEFQAIDPS--NIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY 60
+K+YN+L R F DP + Y CGPTVYD AH+G+ R + D++ R+++ Y
Sbjct: 22 SPLKMYNSLTRSKNAFIPKDPEGHRVTWYSCGPTVYDDAHLGHPRNYVTTDIIRRIMQDY 81
Query: 61 YGEKCVTYVRNITDIDDKIIERARQEHP 88
+ II RARQ+H
Sbjct: 82 FHFN--------------IIVRARQQHL 95
>gi|471728|gb|AAA17656.1| cysteinyl-tRNA synthetase homolog [Helicobacter pylori]
Length = 188
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 36/189 (19%), Positives = 70/189 (37%), Gaps = 31/189 (16%)
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGII 347
K +++ ++R +L HYR ++F + L ++ L K +
Sbjct: 4 KDALKNYDGEILRNYLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGNLGGINPNF 63
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEV 396
+L + +DLN A+ L + + + D +L +LGI
Sbjct: 64 KKEILECMQDDLNVSKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFVEELLGIGF 123
Query: 397 CKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+++ IE ++ER + K F AD+IR++L + L D
Sbjct: 124 KDPSAYFQLGVSESEKQEIENKIEERKRAKEQKDFLKADHIREELLKQKIALMDT----- 178
Query: 451 GQRMTRWKQ 459
+ T W++
Sbjct: 179 -PQGTIWEK 186
>gi|255018804|ref|ZP_05290930.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
Length = 207
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/197 (24%), Positives = 78/197 (39%), Gaps = 42/197 (21%)
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
K SKS GNFIT++++L + VIR ML HYR+PI L +A+ L +
Sbjct: 5 KXSKSLGNFITLHDVL-------KDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGLER 57
Query: 337 WPQTSTSKG------------------------IIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + A + +D NT +AI H+LA
Sbjct: 58 LMIAYQNIDHRIQTDDGEYVEEVHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELA 117
Query: 373 RESTKN-----------HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLK 421
+ + + L + A +LG+++ + +E L++ERL
Sbjct: 118 KRANIYLAKETVSINVLREFLSMMRLFAEVLGLKLENTQSDSLDDSEVEALIEERLQARN 177
Query: 422 MKKFSSADYIRKQLESK 438
+ F+ AD IR L+ K
Sbjct: 178 ERNFARADEIRDILKRK 194
>gi|294637577|ref|ZP_06715860.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
gi|291089283|gb|EFE21844.1| cysteine--tRNA ligase [Edwardsiella tarda ATCC 23685]
Length = 88
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 35/83 (42%), Gaps = 14/83 (16%)
Query: 386 NASAHILGIEVCKE--------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A +LG+ + + IE L+++R K ++ AD R QL +
Sbjct: 12 RRLAGVLGLLEQDPDAFLQSGASADDGEAAQIEALIKQRNDARAAKDWARADDARDQLNA 71
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G +LED G + T W++K
Sbjct: 72 LGIVLED------GPQGTTWRRK 88
>gi|315124324|ref|YP_004066328.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315018046|gb|ADT66139.1| cysteinyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 206
Score = 99.0 bits (245), Expect = 1e-18, Method: Composition-based stats.
Identities = 48/210 (22%), Positives = 76/210 (36%), Gaps = 41/210 (19%)
Query: 278 MSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKW 337
MSKS N I + L + + +R +L +HYR +++ L A+ L K+
Sbjct: 1 MSKSLNNSFFIKDAL-------KEFMGEALRFYLLSSHYRSHFKYSLSDLENAKKRLDKF 53
Query: 338 PQTSTSKG-----------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ I +L L +DLN A+ L + D
Sbjct: 54 YRLKKRLDLGEISDFDVLNDIEIKSEIAKQILEILNDDLNISKALALLDDFISSANLELD 113
Query: 381 -----------LLPIFNASAHILGI------EVCKEHLNKNISIAIEKLVQERLILLKMK 423
+ + A I G + ++K IEKL+ ER K K
Sbjct: 114 KESKNKILKQNIKEALSELAKIFGFGFMDTTLYFQWGVSKEEREEIEKLILERTEAKKNK 173
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQR 453
F++AD IR+QL SK L + N ++
Sbjct: 174 DFNTADAIREQLNSKKITLLNTPNGTIWEK 203
>gi|269861594|ref|XP_002650497.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
gi|220066039|gb|EED43556.1| cysteinyl-tRNA synthetase [Enterocytozoon bieneusi H348]
Length = 86
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 23/88 (26%), Positives = 35/88 (39%), Gaps = 13/88 (14%)
Query: 378 NHDLLPIFNASAHILGIEV--CKEHLNKN-----ISIAIEKLVQERLILLKMKKFSSADY 430
L A +LG+ E L + ++ L+Q RL K ++ +D
Sbjct: 2 AAGLAARLKELASVLGVLQMEADEFLQAGAEGRVDAAEVDALIQARLAARTNKDWAESDR 61
Query: 431 IRKQLESKGFILEDYKNPDNGQRMTRWK 458
IR QL + G +LED K T W+
Sbjct: 62 IRDQLTAMGVVLEDGK------GGTTWR 83
>gi|213857653|ref|ZP_03384624.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. M223]
Length = 177
Score = 98.2 bits (243), Expect = 2e-18, Method: Composition-based stats.
Identities = 35/194 (18%), Positives = 65/194 (33%), Gaps = 53/194 (27%)
Query: 303 PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLS 353
A +R ++ HYR ++++ + L +A L + + +
Sbjct: 1 DAETVRYFLMSGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVE 60
Query: 354 ALYNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE------ 399
A+ +D NT A L +ARE + + + + +LG+ +
Sbjct: 61 AMNDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQS 120
Query: 400 --HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYK 446
+ IE L+Q+RL + +L G ILED
Sbjct: 121 GAQADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED-- 167
Query: 447 NPDNGQRMTRWKQK 460
G + T W++K
Sbjct: 168 ----GPQGTTWRRK 177
>gi|330948101|gb|EGH48361.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 107
Score = 95.5 bits (236), Expect = 1e-17, Method: Composition-based stats.
Identities = 63/115 (54%), Positives = 75/115 (65%), Gaps = 8/115 (6%)
Query: 198 TPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADR 257
P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL FPHHENEIAQS A
Sbjct: 1 KPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPHHENEIAQSEAATG 60
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
+ AN W+H G + + G KMSKS NF TI ++LE + V+R ++
Sbjct: 61 -KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-------KYHPEVVRYLLV 107
>gi|303236114|ref|ZP_07322716.1| DALR domain protein [Prevotella disiens FB035-09AN]
gi|302483696|gb|EFL46689.1| DALR domain protein [Prevotella disiens FB035-09AN]
Length = 185
Score = 95.1 bits (235), Expect = 2e-17, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 60/182 (32%), Gaps = 34/182 (18%)
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-----------------GII 347
IR +L HYR +DF+ + L A+ K +
Sbjct: 1 MTIRFFILSAHYRGTVDFSNEALQAAQKGYEKLMNAIEDLKRVQTADKSDENTAKFVAEL 60
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA-------------SAHILGI 394
A+ +DL T + I L + D + + ILG+
Sbjct: 61 RQKCYDAMNDDLMTPTVISHLFEACHTINLLIDHKAQIDETDLKELSETVNLFAFDILGL 120
Query: 395 EVCKEHLNKNISIA----IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ N A ++ +++ R K+++ +D IR L GF ++D K+
Sbjct: 121 INERGANNDAREEAYGKVVDMVLELRAKAKANKEWAVSDQIRDALADAGFQVKDTKDGVT 180
Query: 451 GQ 452
+
Sbjct: 181 WK 182
>gi|89266455|gb|ABD65519.1| hypothetical protein [Ictalurus punctatus]
Length = 142
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 61/112 (54%), Positives = 76/112 (67%), Gaps = 2/112 (1%)
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
K++P DF LWK P+EP WESPWGRGRPGWHIECS ++S G DIH GG+DL FP
Sbjct: 27 DKRDPRDFALWKAWKPLEPFWESPWGRGRPGWHIECSTIASSVFGSQLDIHSGGIDLAFP 86
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLE--GRKMSKSNGNFITINELLE 293
HHENEIAQ ++ N ++H+G L+L+ KMSKS N+ITI L+
Sbjct: 87 HHENEIAQCEAYHNCDQWGNYFLHSGHLHLKGSTEKMSKSLKNYITIKRLIT 138
>gi|325656978|gb|ADZ38982.1| CysS [Transformation and cloning vector pVCC]
Length = 171
Score = 93.6 bits (231), Expect = 6e-17, Method: Composition-based stats.
Identities = 34/175 (19%), Positives = 62/175 (35%), Gaps = 31/175 (17%)
Query: 310 AMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTS--------KGIIDPAVLSALYNDLNT 361
+L HYR ++F + L ++ L K + +L + +DLN
Sbjct: 1 YLLGVHYRSVLNFNEEDLLVSKKRLDKIYRLKQRVLGTLGGINPNFKKEILECMQDDLNV 60
Query: 362 VSAIQALHKLARESTKNHD-----------LLPIFNASAHILGIEVCKEHL------NKN 404
A+ L + + + D +L +LGI +++
Sbjct: 61 SKALSVLESMLSSTNEKLDQNPKNKALKGEILANLKFIEELLGIGFKDPSAYFQLGVSES 120
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
IE ++ER + K F AD IR++L + L D + T W++
Sbjct: 121 EKQEIENKIEERKRAKEQKNFLKADSIREELLKQKIALMDT------PQGTIWEK 169
>gi|218678400|ref|ZP_03526297.1| cysteinyl-tRNA synthetase [Rhizobium etli CIAT 894]
Length = 117
Score = 92.8 bits (229), Expect = 1e-16, Method: Composition-based stats.
Identities = 47/116 (40%), Positives = 73/116 (62%)
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKN 404
D VL+AL +DLNTV+A+QALH LA+ + + F A+A +LG+ K +++
Sbjct: 1 AEPDETVLNALADDLNTVAAVQALHALAQAAHSDPAAAARFAATASLLGLLPKKAEIDEA 60
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
++ A++ LV RL +LK K F+ AD IR +L +KG L+D K+ G+R+T W+ K
Sbjct: 61 VAAAVDALVAMRLEMLKAKNFAEADKIRDELTAKGIQLKDGKDAATGERVTTWEVK 116
>gi|327307610|ref|XP_003238496.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326458752|gb|EGD84205.1| cysteinyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 453
Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 89/407 (21%), Positives = 150/407 (36%), Gaps = 66/407 (16%)
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+T +F++D L L P R T++IP++I I+ II +G AY + I+
Sbjct: 60 FRTLTRNFETRFLEDMWCLNVLDPDELTRVTSYIPEIIQFIEKIIDNGFAYSTLDGSIYF 119
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN----------PADFILWKRSTPMEPGWE 205
K++ + ++ + + DF LW+ S P EP W
Sbjct: 120 NIDKFENAGNHYAKLEPWNRHNKHLQRDGEGSLSKNTTAKASKNDFALWEASRPGEPSWP 179
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC--CADRIEKTAN 263
SPWG GRPGWHIECSAM+S LG DIH GG+DL FPHH+NE+ Q+ A E +
Sbjct: 180 SPWGNGRPGWHIECSAMASAKLGSQIDIHSGGIDLAFPHHDNELPQNMVNVARSWEAKLD 239
Query: 264 IWIHN--GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
+ + L+ + + + N ++ L + + V ++
Sbjct: 240 NFFLKARNIVVLKKTILEEQSHNDYSLTRQLISAQEK-------VFNALCSSFDTPAAMN 292
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV-----SAIQALHKLAREST 376
+ + + D+ + + AL + R
Sbjct: 293 AISELEGARWVTSMMNIFGLNGHASPHNPDIGWAGIDVPEYSKPYLNTLSALRDVVRRLA 352
Query: 377 KNH---------DLLPIFNASAHILG----------IEVCKEHLNKNISIAI-------E 410
K+ ++ +SA LG +EV ++ ++ S+ I
Sbjct: 353 KSKAHITSQTLGSIINTIGSSAD-LGHSMLDLALPYVEVLRKFKDQIASLNIGTTEVDPN 411
Query: 411 KLVQERLILLKMKKFSSADYIRK-QLESKGFILEDYKNPDNGQRMTR 456
+L++ + D IR + G LED + R
Sbjct: 412 QLLR----------Y--CDRIRDVDVFDLGIYLEDQDSGCAIIRPVT 446
>gi|260891412|ref|ZP_05902675.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
gi|260858795|gb|EEX73295.1| cysteine--tRNA ligase [Leptotrichia hofstadii F0254]
Length = 146
Score = 92.1 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 26/141 (18%), Positives = 47/141 (33%), Gaps = 24/141 (17%)
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK---------------- 377
+ K + A+ D+NT A+ + RE+ K
Sbjct: 1 MLKIQSFLKKLKNLIKKFEEAMNEDMNTPQALATIFDQIRETNKFISTNENEFSTIYYEI 60
Query: 378 NHDLLPIFNASAHILGIEVCKEHLNKNISIA--------IEKLVQERLILLKMKKFSSAD 429
+ ++ GI + E+ K IE L++ R K F +D
Sbjct: 61 KKSYDSLKAKLENVFGIAIEVENAVKEEDGENMELTKKLIELLIKLRSEARSEKNFKLSD 120
Query: 430 YIRKQLESKGFILEDYKNPDN 450
IR +L++ G ++D K+
Sbjct: 121 EIRDELKALGVEIKDNKDGST 141
>gi|309803792|ref|ZP_07697878.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
gi|308164201|gb|EFO66462.1| DALR domain protein [Lactobacillus iners LactinV 11V1-d]
Length = 110
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 27/111 (24%), Positives = 47/111 (42%), Gaps = 14/111 (12%)
Query: 355 LYNDLNTVSAIQALHKLAREST--------KNHDLLPIFNASAHILGIEVCKEHLNKNIS 406
+ +D N +A+ +H+L + +L L I K
Sbjct: 1 MDDDFNVQNALSVMHELTLHVNVHLNNDFIDHKNLQDFVQLMDEWLLIFGVKITTEMEND 60
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
++KLV +R + + K ++++D IR +L +KG ILED + TRW
Sbjct: 61 DTVQKLVDQRNLARQNKDWATSDQIRDELLAKGIILEDT------PQGTRW 105
>gi|255572116|ref|XP_002526998.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
gi|223533633|gb|EEF35370.1| cysteinyl-tRNA synthetase, putative [Ricinus communis]
Length = 183
Score = 91.7 bits (226), Expect = 3e-16, Method: Composition-based stats.
Identities = 73/184 (39%), Positives = 96/184 (52%), Gaps = 14/184 (7%)
Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSI 159
+ Q +K + + L ++++ AY + ++ F
Sbjct: 5 AALTCQVLLKCSREVNPLPVKELQLSSDYQQW------------FAYASEGDVFFSVDEF 52
Query: 160 PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIEC 219
PNYG S +K++ + G R K+NPADF LWK + P EP WESPW GRPGWHIEC
Sbjct: 53 PNYGQLSGQKLENHRAGER-NPDSRKQNPADFALWKAAKPGEPSWESPWVPGRPGWHIEC 111
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
AMS L FDIHGGG DLIFPH+ENE+ +S A E + W+HNG + KMS
Sbjct: 112 GAMSVQCLTFKFDIHGGGSDLIFPHYENEMTRSI-ATCQESNVSYWMHNGHVTNNNEKMS 170
Query: 280 KSNG 283
KS G
Sbjct: 171 KSPG 174
>gi|153840519|ref|ZP_01993186.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149745817|gb|EDM56947.1| cysteinyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 77
Score = 89.4 bits (220), Expect = 1e-15, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 33/83 (39%), Gaps = 13/83 (15%)
Query: 385 FNASAHILGIEVCKEHL-------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
A ++GI N + IE L++ R K +++AD R +L
Sbjct: 1 MRELADVIGILYQDPEAFLKGNAGNDDEVAEIEALIKLRNDSRASKDWANADMARDKLTE 60
Query: 438 KGFILEDYKNPDNGQRMTRWKQK 460
G +LED G T W++K
Sbjct: 61 MGIVLED------GPEGTTWRRK 77
>gi|213023784|ref|ZP_03338231.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 167
Score = 89.0 bits (219), Expect = 1e-15, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 60/184 (32%), Gaps = 53/184 (28%)
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---------IIDPAVLSALYNDLNTVS 363
HYR ++++ + L +A L + + + A+ +D NT
Sbjct: 1 SGHYRSQLNYSEENLKQARASLERLYTALRGTDKSAAPAGGEAFEARFVEAMNDDFNTPE 60
Query: 364 AIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE--------HLNKNISI 407
A L +ARE + + + + +LG+ + +
Sbjct: 61 AYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGAQADDGEVA 120
Query: 408 AIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
IE L+Q+RL + +L G ILED G + T
Sbjct: 121 EIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED------GPQGTT 163
Query: 457 WKQK 460
W++K
Sbjct: 164 WRRK 167
>gi|261884942|ref|ZP_06008981.1| cysteinyl-tRNA synthetase [Campylobacter fetus subsp. venerealis
str. Azul-94]
Length = 137
Score = 89.0 bits (219), Expect = 2e-15, Method: Composition-based stats.
Identities = 26/128 (20%), Positives = 47/128 (36%), Gaps = 17/128 (13%)
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD-----------LLPIFNASAHIL 392
+L A+ +DLN A+ L ++ + D L+ +L
Sbjct: 10 DAKFKKDILDAMSDDLNISVALAILDEMVNNANAKLDNEPKNRDFKQILVSNLEFVKELL 69
Query: 393 GIEVCKEHL------NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYK 446
GI E + ++ I L+ +R + K K F AD IR +L + + D
Sbjct: 70 GILYIDEFKWFQWGVDDSLKQEISVLIDQRNMAKKDKNFILADQIRDKLTNMDISIMDTP 129
Query: 447 NPDNGQRM 454
N +++
Sbjct: 130 NGTMWEKV 137
>gi|94270264|ref|ZP_01291692.1| probable cysteinyl-tRNA synthetase [delta proteobacterium MLMS-1]
gi|93450874|gb|EAT01891.1| probable cysteinyl-tRNA synthetase [delta proteobacterium MLMS-1]
Length = 116
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 16/92 (17%), Positives = 29/92 (31%), Gaps = 12/92 (13%)
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHL------------NKNISIAIEKLVQERLILL 420
R+ D I G+ IEKL+ +R
Sbjct: 16 RDLELLRDSAAKLRELGGIFGLLQEDPAAYLARRQERLLAGLDITPGEIEKLLAQRQTAR 75
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+ ++ AD IR L +K ++D + + +
Sbjct: 76 QNGDWAEADRIRDLLAAKKIAIKDGPDGTSWE 107
>gi|330947053|gb|EGH47846.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 161
Score = 86.3 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 49/153 (32%), Positives = 74/153 (48%), Gaps = 16/153 (10%)
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DL FPHHENEIAQS A + AN W+H G + + G KMSKS NF TI ++LE
Sbjct: 1 GGSDLEFPHHENEIAQSEAATG-KTYANAWLHCGMIRINGEKMSKSLNNFFTIRDVLE-- 57
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK--------GII 347
+ V+R ++ +HYR I+++ L E++ L ++
Sbjct: 58 -----KYHPEVVRYLLVSSHYRSAINYSEDSLRESKAALERFYHALKGLPVAEPAGGEAF 112
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+A+ +D T A L ++ RE + +
Sbjct: 113 VERFSTAMNDDFGTPEACAVLFEMVREINRLRE 145
>gi|149246694|ref|XP_001527772.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
gi|146447726|gb|EDK42114.1| cysteinyl-tRNA synthetase [Lodderomyces elongisporus NRRL YB-4239]
Length = 411
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 70/312 (22%), Positives = 112/312 (35%), Gaps = 91/312 (29%)
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
M+S G DIH GG+DL FPHH+NE+AQS ++ N ++HNG L+++G+KMSKS
Sbjct: 1 MASDVGGSQLDIHSGGVDLCFPHHDNELAQSEAYFDNDQWVNYFMHNGHLHIQGQKMSKS 60
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTE---AEILLSKWP 338
NFITI + L + + A +RL ++ + +P+DF ++E E +K+
Sbjct: 61 LKNFITIQDAL-------KDYSARQLRLVFAVSSWDKPLDFKDSLISEVKSIESTFNKFF 113
Query: 339 QTSTSKGIIDPAVLSALYN-----------------------------DLNTVSAIQALH 369
+ L + +L++ AI+AL
Sbjct: 114 SVVRALINDYKHKLEKGDHVSKKFTEAEKNLYSELEKTQLAVDSAFRDNLSSGQAIRALL 173
Query: 370 KLARESTKNHDLLP----------------IFNASAHILGIEVCKE---HLNKNISIA-- 408
L + ILG+E + + +
Sbjct: 174 DLVSNANSYIQATASGKVDLKVEILILVTNYILKILGILGLETRPDGLGWADSKVDAKDL 233
Query: 409 ---------------------IEKLVQERLILL--------KMKKFSSA-DYIRKQLESK 438
++ L Q R + K F A D IR QL
Sbjct: 234 TGAGTGAGASSGSNEDTILPYVKALAQFRDTVRGLAIEKADNNK-FLIATDTIRSQLLQL 292
Query: 439 GFILEDYKNPDN 450
G L+D + +
Sbjct: 293 GVSLDDRPDGTS 304
>gi|75760639|ref|ZP_00740668.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|74491882|gb|EAO55069.1| Cysteinyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
Length = 136
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 31/126 (24%), Positives = 52/126 (41%), Gaps = 20/126 (15%)
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILG 393
A A+ +D NT +AI L+ +A + + + ILG
Sbjct: 19 EKFQTAFEEAMNDDFNTANAITELYNVANHANQYLLEEHTSKVVIEAYVKQLETLFDILG 78
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+E+ +E L + Q+R+ K + F+ +D IR L+ + ILED +
Sbjct: 79 LELTQEELLDEEIEELI---QKRIEARKNRDFALSDQIRDDLKGRNIILEDT------AQ 129
Query: 454 MTRWKQ 459
TRWK+
Sbjct: 130 GTRWKR 135
>gi|289679398|ref|ZP_06500288.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. syringae FF5]
Length = 126
Score = 83.6 bits (205), Expect = 6e-14, Method: Composition-based stats.
Identities = 20/104 (19%), Positives = 37/104 (35%), Gaps = 15/104 (14%)
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD--------LLPIFNASAHILGIEV 396
+A+ +D T A L ++ RE + + L A +LG+
Sbjct: 22 EAFVERFSTAMNDDFGTPEACAVLFEMVREINRLRESDIAAAAGLAARLKQLASVLGVLQ 81
Query: 397 CKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
+ + + +E L+Q RL K ++ +D IR
Sbjct: 82 LEADDFLRAGAEGRVDAAEVEALIQARLAARAAKDWAESDRIRD 125
>gi|218458260|ref|ZP_03498351.1| cysteinyl-tRNA synthetase [Rhizobium etli Kim 5]
Length = 90
Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats.
Identities = 28/70 (40%), Positives = 46/70 (65%)
Query: 391 ILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+LG+ K +++ ++ A++ LV RL +LK K F+ AD IR +L +KG L+D K+P
Sbjct: 20 LLGVLPKKAEIDEAVAAAVDALVAMRLEMLKAKNFAEADNIRDELTAKGIQLKDGKDPVT 79
Query: 451 GQRMTRWKQK 460
G+R+T W+ K
Sbjct: 80 GERVTTWEVK 89
>gi|110740110|dbj|BAF01956.1| putative cysteinyl-tRNA synthetase [Arabidopsis thaliana]
Length = 140
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 29/130 (22%), Positives = 51/130 (39%), Gaps = 21/130 (16%)
Query: 344 KGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI---FNASAHILGI------ 394
++ P L+A+ L T++ + K +++ + L + ILG+
Sbjct: 2 DDLLTPVTLAAMSEPLKTINDLIHTRKGKKQARREESLKALETTIRDVLTILGLMPTSYS 61
Query: 395 EVCKEHLNKNI------SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
EV ++ K + + + VQER K K++ +D IRK L G L D
Sbjct: 62 EVLEQLKEKALKRAGLKEEDVLQRVQERTDARKNKEYERSDAIRKDLAKVGIALMDS--- 118
Query: 449 DNGQRMTRWK 458
T W+
Sbjct: 119 ---PEGTTWR 125
>gi|325067261|ref|ZP_08125934.1| cysteinyl-tRNA synthetase [Actinomyces oris K20]
Length = 113
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 16/83 (19%)
Query: 385 FNASAHILGIEVCKEHLNKNI---------SIAIEKL-------VQERLILLKMKKFSSA 428
+ +LG++ E + A+E L + ER K ++ A
Sbjct: 28 LRSQLDVLGLDPLAEPWRARVLDGAGSSQGGAAMEALDRLIRHDLDERAQARAAKDWARA 87
Query: 429 DYIRKQLESKGFILEDYKNPDNG 451
D +R +L G ++ED +
Sbjct: 88 DALRDKLTGAGVVVEDSPSGARW 110
>gi|227537538|ref|ZP_03967587.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
gi|227242675|gb|EEI92690.1| conserved hypothetical protein [Sphingobacterium spiritivorum ATCC
33300]
Length = 96
Score = 82.4 bits (202), Expect = 2e-13, Method: Composition-based stats.
Identities = 21/94 (22%), Positives = 39/94 (41%), Gaps = 3/94 (3%)
Query: 363 SAIQALHKLAREST-KNHDLLPIF--NASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
I +++ K D L F + ILG+ N+ + ++ R
Sbjct: 2 RVINSIYDGKATINQKGLDELKAFMKDFVEDILGLNDDSNAGTDNMDELMNVIINIRNSA 61
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ K F+++D IR++L S G L+D K+ +
Sbjct: 62 KQNKDFATSDRIREELSSIGIQLKDSKDGTLWNK 95
>gi|289812154|ref|ZP_06542783.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. AG3]
Length = 117
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 43/115 (37%), Positives = 66/115 (57%), Gaps = 7/115 (6%)
Query: 67 TYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
YVRNITDIDDKII+RA + ++ + + + +D L L P +PRAT
Sbjct: 2 KYVRNITDIDDKIIKRANENG------ESFVALVDRMIAEMHQDFDALNILRPDSEPRAT 55
Query: 127 NHIPQMIYLIQNIILHGHAYE-ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+HI ++I L + +I GHAY N +++FD + P YG SR+ +++ + G RV
Sbjct: 56 HHIQEIIELTRTLIEKGHAYVADNGDVMFDVPTDPTYGQLSRQDLEQLQAGARVD 110
>gi|145629046|ref|ZP_01784845.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
gi|144978549|gb|EDJ88272.1| cysteinyl-tRNA synthetase [Haemophilus influenzae 22.1-21]
Length = 52
Score = 81.3 bits (199), Expect = 3e-13, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 28/54 (51%), Gaps = 6/54 (11%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
IE L+++R K +++AD R +L + G +LED G T W+++
Sbjct: 5 QKIEALIKQRNEARAAKDWATADAARNELTAMGIVLED------GANGTTWRKQ 52
>gi|293334393|ref|NP_001169895.1| hypothetical protein LOC100383789 [Zea mays]
gi|224032219|gb|ACN35185.1| unknown [Zea mays]
Length = 229
Score = 80.9 bits (198), Expect = 4e-13, Method: Composition-based stats.
Identities = 66/173 (38%), Positives = 87/173 (50%), Gaps = 4/173 (2%)
Query: 116 CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM 175
+ + + + P Y + + ++
Sbjct: 50 PYTVDAYYSGVGVLTGYAPHAIVHPQQNDTTNTPGMLPVEPAEEPIYVNAKQYHAILRRR 109
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG 235
TR + K + K + EP W+SPWGRGRPGWHIECSAMS+HYLG VFDIHG
Sbjct: 110 QTRAKLEAQNKMVKN---RKAAKEGEPFWDSPWGRGRPGWHIECSAMSAHYLGHVFDIHG 166
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
GG DLIFPHHENE+AQS A E W+HNGF+N + +KM+KS+ NF +
Sbjct: 167 GGKDLIFPHHENELAQSQAAY-PESEVKCWMHNGFVNKDDKKMAKSDNNFSRL 218
>gi|261881607|gb|ACY04687.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 60/169 (35%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ H+ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEHLDAMVRMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S +R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881645|gb|ACY04706.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881647|gb|ACY04707.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 79.4 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSMHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGSDLLFPHHENEACQTRC 168
>gi|306836883|ref|ZP_07469839.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
gi|304567255|gb|EFM42864.1| cysteine--tRNA ligase [Corynebacterium accolens ATCC 49726]
Length = 64
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 9/51 (17%), Positives = 22/51 (43%)
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
+ + ++ ++ R K F++AD +R +L + G + D +
Sbjct: 9 ADAALDALVQAELERRTQARAEKDFATADAVRDRLTAAGITITDTPDGPTW 59
>gi|261881663|gb|ACY04715.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSMYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881613|gb|ACY04690.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881631|gb|ACY04699.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168
>gi|261881605|gb|ACY04686.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNTPYQIDIHAGGTDLLFPHHENEACQTRC 168
>gi|261881697|gb|ACY04732.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881699|gb|ACY04733.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I +++ + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSNIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881705|gb|ACY04736.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGTDLLFPHHENEACQTRC 168
>gi|261881691|gb|ACY04729.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENESCQTRC 168
>gi|261881633|gb|ACY04700.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGSDLLFPHHENEACQTRC 168
>gi|261881617|gb|ACY04692.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 93/169 (55%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVRMIETLLEKNFAYQVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANSPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881635|gb|ACY04701.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881655|gb|ACY04711.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIKTLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881619|gb|ACY04693.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881687|gb|ACY04727.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881695|gb|ACY04731.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881703|gb|ACY04735.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881707|gb|ACY04737.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881709|gb|ACY04738.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881711|gb|ACY04739.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881713|gb|ACY04740.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881727|gb|ACY04747.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881729|gb|ACY04748.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881731|gb|ACY04749.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881733|gb|ACY04750.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881735|gb|ACY04751.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881737|gb|ACY04752.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881739|gb|ACY04753.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881741|gb|ACY04754.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881743|gb|ACY04755.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881745|gb|ACY04756.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881747|gb|ACY04757.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881609|gb|ACY04688.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIGSYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSMHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881649|gb|ACY04708.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881621|gb|ACY04694.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881689|gb|ACY04728.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881693|gb|ACY04730.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881717|gb|ACY04742.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881719|gb|ACY04743.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881721|gb|ACY04744.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881723|gb|ACY04745.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|328478469|gb|EGF48191.1| cysteinyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
Length = 110
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 31/116 (26%), Positives = 52/116 (44%), Gaps = 20/116 (17%)
Query: 355 LYNDLNTVSAIQALHKLARESTKN-----------HDLLPIFNASAHILGIEVCKEHLNK 403
+ +D+N + + L LA+ + +DLL ++A I G+
Sbjct: 1 MDDDVNVQNGLTVLFDLAKCLNEYANEDTVKQESVNDLLNQYDAWLQIFGVVFTDP---N 57
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
N+ I+ LV+ R K F+ +D IR QL ++G ILED + TRW++
Sbjct: 58 NLDADIDALVKARDAARAAKDFAKSDEIRDQLAAQGIILEDT------PQGTRWRR 107
>gi|261881637|gb|ACY04702.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 91/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881611|gb|ACY04689.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANAPYQIDIHAGGSDLLFPHHENEACQTRC 168
>gi|261881665|gb|ACY04716.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881667|gb|ACY04717.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881671|gb|ACY04719.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881673|gb|ACY04720.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881675|gb|ACY04721.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881677|gb|ACY04722.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881679|gb|ACY04723.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881623|gb|ACY04695.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 92/169 (54%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+++I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVHMIETLLEKNFAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S + + ++ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSH-----YLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALTNAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881669|gb|ACY04718.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLDQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLAFTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881725|gb|ACY04746.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.4 bits (189), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNNVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881651|gb|ACY04709.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKQPSLEPKASEYLDAMVSMIKTLLEKNIAYRISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S +R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFSRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881629|gb|ACY04698.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
+I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I
Sbjct: 3 KSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDI 62
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRG 211
DTS +YGS S + + ++ K+ DF+LWK + G++SP G+G
Sbjct: 63 YLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKG 120
Query: 212 RPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
RPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 121 RPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881625|gb|ACY04696.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881627|gb|ACY04697.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 77.0 bits (188), Expect = 6e-12, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
+I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I
Sbjct: 3 KSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNFAYRVSNGDI 62
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRG 211
DTS +YGS S + + ++ K+ DF+LWK + G++SP G+G
Sbjct: 63 YLDTSKDKDYGSLSMHNSSVEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKG 120
Query: 212 RPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
RPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 121 RPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881657|gb|ACY04712.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881659|gb|ACY04713.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881661|gb|ACY04714.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 76.7 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N ++ ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVSMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881681|gb|ACY04724.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881683|gb|ACY04725.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881685|gb|ACY04726.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881701|gb|ACY04734.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|261881715|gb|ACY04741.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 76.7 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N ++ ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY+ +N +
Sbjct: 2 NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYQISNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSIEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881653|gb|ACY04710.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 76.7 bits (187), Expect = 7e-12, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 89/169 (52%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMIFKTLALTDTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|67920768|ref|ZP_00514287.1| similar to Cysteinyl-tRNA synthetase [Crocosphaera watsonii WH
8501]
gi|67856885|gb|EAM52125.1| similar to Cysteinyl-tRNA synthetase [Crocosphaera watsonii WH
8501]
Length = 61
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 24/47 (51%), Gaps = 5/47 (10%)
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++R K K F+ +D IR QL+ +G IL D +T W +
Sbjct: 19 IEQRKEARKNKNFAESDRIRDQLKEQGIILVDQPGG-----VTTWHR 60
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 11/23 (47%)
Query: 3 KKIKIYNTLERKITEFQAIDPSN 25
+ +YNTL RK F I+
Sbjct: 1 MTLTLYNTLTRKKEPFTTIEQRK 23
>gi|58698689|ref|ZP_00373579.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534801|gb|EAL58910.1| cysteinyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 78
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 380 DLLPIFNASAHILGIE---VCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
L F SA +G+ + IE+L+ R + K +++AD IR QL+
Sbjct: 3 KLTESFVKSARFIGLLESSYQEWFTAGVSHQEIERLIDLRRAAKQNKDYNTADKIRDQLK 62
Query: 437 SKGFILEDYKNPDNGQRMTRW 457
G + D ++ T W
Sbjct: 63 QIGVTISDNEDGT-----TTW 78
>gi|261881615|gb|ACY04691.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 59/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N +I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSVEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881639|gb|ACY04703.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 76.3 bits (186), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
+I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I
Sbjct: 3 KSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVGMIETLLEKNIAYRVSNGDI 62
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRG 211
DTS +YGS S + + ++ K+ DF+LWK + G++SP G+G
Sbjct: 63 YLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKG 120
Query: 212 RPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
RPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 121 RPGWHIECSSMVFETLALANAPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|261881641|gb|ACY04704.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 57/168 (33%), Positives = 91/168 (54%), Gaps = 9/168 (5%)
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNEI 152
+I ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +I
Sbjct: 3 KSIQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGDI 62
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGRG 211
DTS +YGS S + + ++ K+ DF+LWK + G++SP G+G
Sbjct: 63 YLDTSKDKDYGSLSVHNSSMEFSRIGLVQE--KRLEQDFVLWKSYKGDNDVGFDSPLGKG 120
Query: 212 RPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
RPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 121 RPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|118380222|ref|XP_001023275.1| hypothetical protein TTHERM_00444130 [Tetrahymena thermophila]
gi|89305042|gb|EAS03030.1| hypothetical protein TTHERM_00444130 [Tetrahymena thermophila
SB210]
Length = 833
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 21/67 (31%), Positives = 29/67 (43%), Gaps = 1/67 (1%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQ 452
I + +K I L+++R K F AD IR L++ G L D K GQ
Sbjct: 707 IHLQNPSNSKMSEKQIISLIEQRNKARKESNFQEADRIRNFLKNNGIALMDEKGGRGKGQ 766
Query: 453 RMTRWKQ 459
+T WK
Sbjct: 767 DVTTWKY 773
>gi|261881643|gb|ACY04705.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 168
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 58/169 (34%), Positives = 90/169 (53%), Gaps = 9/169 (5%)
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANNE 151
N ++ ++S + + +D L P+ +P+A+ ++ M+ +I+ ++ AY +N +
Sbjct: 2 NKSVQELSSIYIESYTRDLNALNVKKPSLEPKASEYLDAMVRMIETLLEKNIAYRVSNGD 61
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST-PMEPGWESPWGR 210
I DTS +YGS S R+ K+ DF+LWK + G++SP G+
Sbjct: 62 IYLDTSKDKDYGSLSVHN--SSMEFGRIGLVQEKRLEQDFVLWKSYKGDNDVGFDSPLGK 119
Query: 211 GRPGWHIECSAM-----SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GRPGWHIECS+M + DIH GG DL+FPHHENE Q+ C
Sbjct: 120 GRPGWHIECSSMVFETLALANTPYQIDIHAGGADLLFPHHENEACQTRC 168
>gi|323209911|gb|EFZ94825.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Montevideo str. 556152]
Length = 115
Score = 75.5 bits (184), Expect = 2e-11, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 43/132 (32%), Gaps = 44/132 (33%)
Query: 356 YNDLNTVSAIQALHKLARESTK--------NHDLLPIFNASAHILGIEVCKE-------- 399
+D NT A L +ARE + + + + +LG+ +
Sbjct: 1 NDDFNTPEAYSVLFDMAREVNRLKGEDMTAANAMASHLRKISGVLGLLEQEPDVFLQSGA 60
Query: 400 HLNKNISIAIEKLVQERLILL-----------KMKKFSSADYIRKQLESKGFILEDYKNP 448
+ IE L+Q+RL + +L G ILED
Sbjct: 61 QADDGEVAEIEALIQQRLDARKAKDWAAADAARD-----------RLTEMGIILED---- 105
Query: 449 DNGQRMTRWKQK 460
G + T W++K
Sbjct: 106 --GPQGTTWRRK 115
>gi|297789694|ref|XP_002862786.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297308510|gb|EFH39044.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 77
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 28/68 (41%), Gaps = 9/68 (13%)
Query: 394 IEVCKEHLNK---NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+E KE K + + VQER K K++ +D IRK L S G L D
Sbjct: 2 LEQLKEKALKRAGLEEEDVLQRVQERTDARKNKEYERSDAIRKDLASVGIALMDS----- 56
Query: 451 GQRMTRWK 458
T W+
Sbjct: 57 -PEGTTWR 63
>gi|168998631|ref|YP_001687899.1| hypothetical protein pK2044_00345 [Klebsiella pneumoniae
NTUH-K2044]
Length = 90
Score = 71.3 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 22/91 (24%), Positives = 37/91 (40%), Gaps = 14/91 (15%)
Query: 378 NHDLLPIFNASAHILGI-EVCKEHLNKNISIA-------IEKLVQERLILLKMKKFSSAD 429
L ++LG+ E + KN S IE+L+ +R +M ++ AD
Sbjct: 6 AAALATTLKYLGNVLGLLEQSADAFLKNRSDLHPAELQLIERLIHQRSKARRMGEWDKAD 65
Query: 430 YIRKQLESKGFILEDYKNPDNGQRMTRWKQK 460
+R +L +G LED T W+ +
Sbjct: 66 RLRNELAEQGIELED------VGENTSWRFR 90
>gi|167578524|ref|ZP_02371398.1| Cysteine--tRNA ligase [Burkholderia thailandensis TXDOH]
Length = 148
Score = 70.5 bits (171), Expect = 6e-10, Method: Composition-based stats.
Identities = 23/98 (23%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNISIAIEKL 412
+ DLN A+ L +L S L + + LG+ K + +I ++ L
Sbjct: 1 MNEDLNLPRALAVLRELVESSLPPSTLRATVDGFDTVPSLGLRDWKPVM-FDIPESVRAL 59
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ER + ++ AD IR+ L ++G+ +E K
Sbjct: 60 LGEREQDRAERNWAKADDIRRTLSARGWRVEGSKEGQR 97
>gi|167616666|ref|ZP_02385297.1| Cysteine--tRNA ligase [Burkholderia thailandensis Bt4]
gi|257143161|ref|ZP_05591423.1| cysteinyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 148
Score = 69.7 bits (169), Expect = 9e-10, Method: Composition-based stats.
Identities = 22/98 (22%), Positives = 42/98 (42%), Gaps = 3/98 (3%)
Query: 355 LYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNISIAIEKL 412
+ DLN A+ L +L + S L + + LG+ + + +I ++ L
Sbjct: 1 MNEDLNLPRALAVLRELVKSSLPPSTLRATVDGFDTVPSLGLRDWQPVM-FDIPESVRAL 59
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
+ ER ++ AD IR+ L ++G+ +E K
Sbjct: 60 LGEREQDRAEGNWAKADDIRRTLSARGWRVEGSKEGQR 97
>gi|330948819|gb|EGH49079.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 62
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 43/62 (69%), Positives = 48/62 (77%)
Query: 185 KKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
K++P DF+LWK P EP WESPWG GRPGWHIECS MS+ LG+ FDIHGGG DL FP
Sbjct: 1 KEDPLDFVLWKGVKPGEPSWESPWGAGRPGWHIECSVMSTCCLGETFDIHGGGSDLEFPR 60
Query: 245 HE 246
HE
Sbjct: 61 HE 62
>gi|18075759|emb|CAD11305.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 59
Score = 69.3 bits (168), Expect = 1e-09, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ ++++ IEK ++ER + K F AD IR++L + L D + T
Sbjct: 1 FQLGVSESEKQEIEKKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------PQGTI 54
Query: 457 WKQ 459
W++
Sbjct: 55 WEK 57
>gi|495470|gb|AAA18866.1| cysteinyl tRNA synthetase [Helicobacter pylori]
Length = 59
Score = 68.2 bits (165), Expect = 2e-09, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 29/63 (46%), Gaps = 6/63 (9%)
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ ++++ IE ++ER + K F AD IR++L + L D + T
Sbjct: 1 FQLGVSESEKQEIENKIEERKRAKEQKNFLKADSIREELLKQKIALMDT------PQGTI 54
Query: 457 WKQ 459
W++
Sbjct: 55 WEK 57
>gi|238608061|ref|XP_002397132.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
gi|215471001|gb|EEB98062.1| hypothetical protein MPER_02496 [Moniliophthora perniciosa FA553]
Length = 169
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 21/49 (42%), Positives = 27/49 (55%), Gaps = 1/49 (2%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
DV+ R++ Y V +V NITDIDDKII+RARQ H +
Sbjct: 1 DVIRRIMSD-YFGYDVHFVMNITDIDDKIIKRARQTHLLETFRADTKSL 48
>gi|18075765|emb|CAD11309.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|18075768|emb|CAD11311.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 54
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE ++ER + K F AD IR++L + L D + T W++
Sbjct: 1 SESEKQEIESKIEERKRAKEQKDFLKADSIREELLQQKIALMDT------PQGTIWEK 52
>gi|18075762|emb|CAD11307.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 59
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 15/63 (23%), Positives = 28/63 (44%), Gaps = 6/63 (9%)
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTR 456
+ ++++ IE ++ER K F AD IR++L + L D + T
Sbjct: 1 FQLGVSESEKQEIENKIEERKRAKAQKDFLKADSIREELLNHKIALMDT------PQGTI 54
Query: 457 WKQ 459
W++
Sbjct: 55 WEK 57
>gi|169836383|ref|ZP_02869571.1| cysteinyl-tRNA synthetase [candidate division TM7 single-cell
isolate TM7a]
Length = 53
Score = 67.0 bits (162), Expect = 6e-09, Method: Composition-based stats.
Identities = 19/40 (47%), Positives = 25/40 (62%), Gaps = 2/40 (5%)
Query: 50 FDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPS 89
FD L R +Y E V YV+N TD+DDKII ++ +E S
Sbjct: 8 FDTLARYFKYKGME--VDYVQNFTDVDDKIINKSIEEGIS 45
>gi|303240347|ref|ZP_07326865.1| Cysteinyl-tRNA synthetase class Ia DALR [Acetivibrio cellulolyticus
CD2]
gi|302592074|gb|EFL61804.1| Cysteinyl-tRNA synthetase class Ia DALR [Acetivibrio cellulolyticus
CD2]
Length = 264
Score = 66.6 bits (161), Expect = 7e-09, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 40/90 (44%), Gaps = 2/90 (2%)
Query: 365 IQALHKLARESTKNHDLLPIFNASAHI--LGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
+ L+K+ ++ +LL I + LGI+ L + +L++ R +
Sbjct: 169 LTTLNKICKDILTTANLLGILLEDPEVFILGIKEKYIKLRSIDMKEVAELIKTRQEAKSL 228
Query: 423 KKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
K + AD ++ +L+ KG I++D +
Sbjct: 229 KNYKLADELKAKLDQKGIIVQDSQFGSGWD 258
>gi|320161482|ref|YP_004174706.1| hypothetical protein ANT_20800 [Anaerolinea thermophila UNI-1]
gi|319995335|dbj|BAJ64106.1| hypothetical protein ANT_20800 [Anaerolinea thermophila UNI-1]
Length = 352
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 14/52 (26%), Positives = 24/52 (46%)
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDN 450
E+ I I LV+ER + + AD +RKQ+ G+++ D +
Sbjct: 297 ENAPSTIPREITTLVEEREKARLARNWEKADSLRKQILEMGYVIRDTPHGPE 348
>gi|18075771|emb|CAD11313.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
gi|18075774|emb|CAD11315.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 54
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 6/58 (10%)
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ IE ++ER + K F AD IR++L + L D + T W++
Sbjct: 1 SESEKQEIENKIEERKRAKERKDFLKADSIREELLKQKIALMDT------PQGTIWEK 52
>gi|117929259|ref|YP_873810.1| cysteinyl-tRNA synthetase-like [Acidothermus cellulolyticus 11B]
gi|117649722|gb|ABK53824.1| Cysteinyl-tRNA synthetase-like protein [Acidothermus cellulolyticus
11B]
Length = 431
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 17/100 (17%), Positives = 32/100 (32%), Gaps = 2/100 (2%)
Query: 354 ALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLN--KNISIAIEK 411
+ L AIQ +S+ + + LG L+ ++ +
Sbjct: 327 MVDAILGLEQAIQDWSADTLQSSDRDEARRELRSLIVRLGEFAQAGALDTSDLVAPFVTA 386
Query: 412 LVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
L+ R + +AD IR +L G + D +
Sbjct: 387 LLDVRSQARSRGDYQTADDIRDRLIRAGVEVRDTPDGVRW 426
>gi|309792716|ref|ZP_07687167.1| hypothetical protein OSCT_3118 [Oscillochloris trichoides DG6]
gi|308225265|gb|EFO79042.1| hypothetical protein OSCT_3118 [Oscillochloris trichoides DG6]
Length = 342
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 10/50 (20%), Positives = 23/50 (46%)
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRM 454
I + +LV +R + +++AD +R Q+ + G+ + D +
Sbjct: 292 IPPEVVELVAQRQAARTQRDWAAADRLRAQIVAAGWQVRDTPEGPVIECG 341
>gi|46205790|ref|ZP_00048091.2| COG0215: Cysteinyl-tRNA synthetase [Magnetospirillum
magnetotacticum MS-1]
Length = 80
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 13/77 (16%), Positives = 26/77 (33%), Gaps = 8/77 (10%)
Query: 384 IFNASAHILGIEVCKEHLNK--------NISIAIEKLVQERLILLKMKKFSSADYIRKQL 435
A +LG++ + + + R + F++AD IR +L
Sbjct: 2 AVRAMLDVLGLDPGDAQWADRGDSRYAAVLDAVVGAELAARAEARASRDFATADAIRDRL 61
Query: 436 ESKGFILEDYKNPDNGQ 452
+ G +ED +
Sbjct: 62 AAAGVAVEDSADGARWT 78
>gi|331013874|gb|EGH93930.1| cysteinyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 81
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 7/55 (12%)
Query: 389 AHILGIEVCKE-------HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE 436
A +LG+ + + + +E L+Q RL K ++ +D IR Q+
Sbjct: 1 ASVLGVLQLEADDFLRAGAEGRVDAAQVEALIQARLAARAAKDWAESDRIRDQIT 55
>gi|298249675|ref|ZP_06973479.1| Cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
gi|297547679|gb|EFH81546.1| Cysteinyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
Length = 361
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 16/71 (22%), Positives = 29/71 (40%), Gaps = 1/71 (1%)
Query: 382 LPIFNASAHILGIEVCKEHLNKNISI-AIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ A L + +++L + I+ LV R L K++ AD +R L + G
Sbjct: 285 IETLLAPGETLDPRIEEQNLAGALPSPLIDALVTIRTDLRAAKQWPFADRLRDTLSTYGI 344
Query: 441 ILEDYKNPDNG 451
++ED
Sbjct: 345 VIEDTPQGSQW 355
>gi|289523838|ref|ZP_06440692.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289502922|gb|EFD24086.1| cysteine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 134
Score = 61.3 bits (147), Expect = 3e-07, Method: Composition-based stats.
Identities = 44/123 (35%), Positives = 62/123 (50%), Gaps = 8/123 (6%)
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETK 295
GG DLIFPHHENEIAQ+ A ++ WIHNG+L + KMSKS GN +T+ E+
Sbjct: 1 GGSDLIFPHHENEIAQAEAATG-KQFVRFWIHNGYLLINKEKMSKSLGNILTVREI---- 55
Query: 296 KFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSAL 355
+++ +RL +L HYR P+DF+ L +A L + +
Sbjct: 56 ---RKNFQPLAVRLFILAAHYRSPLDFSDDSLIQATKSLQRLRNCYSDLLFYMERSQEKN 112
Query: 356 YND 358
D
Sbjct: 113 TPD 115
>gi|163782331|ref|ZP_02177329.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159882364|gb|EDP75870.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 493
Score = 60.5 bits (145), Expect = 6e-07, Method: Composition-based stats.
Identities = 49/318 (15%), Positives = 81/318 (25%), Gaps = 63/318 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R + V + +T D+ KI + A + S
Sbjct: 13 VNDVPHIGHAYTTIAADTVARFYRLRGYD--VFF---LTGTDEHGLKIQKSAEERGVS-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-----------------------TNH 128
+ +N++ F + L +
Sbjct: 66 ----PKELADRNSENFKRLWEFLGIEYTKFIRTTDPEHVELVKEVFTKSYENGDIYLGEY 121
Query: 129 IPQMIYLIQNIIL-------HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+ + S S + K+ E
Sbjct: 122 EGWYCVGCEEFKSEMELAEGNSCPIHMKPCEYIREPSYFFRLSKYQDKLLELYEEHPEFV 181
Query: 182 KYHKKNPADFILWK--------RSTPMEPGWESPWG----RGRPGWHIECSAMSSHYLGK 229
+ + K W P W S G+
Sbjct: 182 RPDYRRNEIISFVKQGLKDLSVTRPRSRVRWGIPVPFDEGHTIYVWFDALFNYISALNGQ 241
Query: 230 -----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H A +G+ +EG+KMSKS GN
Sbjct: 242 VDRYWPADLHIVGKDILRFHTVYWPAFLFSVGYEVPET--VFAHGWWTVEGKKMSKSLGN 299
Query: 285 FITINELLETKKFGGRSW 302
I+ E++E +
Sbjct: 300 VISPYEVVEEYGLDEVRY 317
>gi|225850511|ref|YP_002730745.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
gi|225646396|gb|ACO04582.1| methionyl-tRNA synthetase [Persephonella marina EX-H1]
Length = 624
Score = 58.9 bits (141), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 58/183 (31%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + +T D+ KI + A ++ S
Sbjct: 15 VNDLPHLGHAYTTVAADVLARYFRQKGVKTFF-----LTGTDEHGLKIQKSAEEKGIS-- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ ++F + L +HI + Y+ Q +G Y +
Sbjct: 68 ----PKELADITHKKFKELWEVLNISYDRFIRTTDPDHIKAVQYIFQKCYDNGDIYLSEY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + D + P + K+ F L K + ++
Sbjct: 124 ESWYCVGCEEFKTETEIKDYDYKCPVHLKPCEKVKEESYFFRLSKYQDKLLKLYQEKPDF 183
Query: 211 GRP 213
P
Sbjct: 184 IMP 186
>gi|189425008|ref|YP_001952185.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
gi|189421267|gb|ACD95665.1| methionyl-tRNA synthetase [Geobacter lovleyi SZ]
Length = 508
Score = 58.9 bits (141), Expect = 2e-06, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 17/167 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + V + +T D+ K+ + A+
Sbjct: 14 VNDVPHIGHAYTTVAADVLARYKRMKGFD--VFF---LTGSDEHGQKVEKAAQTNG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + ++F +L H + ++ + ++ G Y E
Sbjct: 65 --ETPLELADRVVKRFQALWEKLGISHNDFIRTTQERHKQGVTHIFKQLMEQGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + K + ++ K
Sbjct: 123 EDWYCTPCETFWTETQVEDGKCPDCNRPVEKLKEESYFFKMSAYGEK 169
>gi|213024399|ref|ZP_03338846.1| cysteinyl-tRNA synthetase [Salmonella enterica subsp. enterica
serovar Typhi str. 404ty]
Length = 78
Score = 58.2 bits (139), Expect = 3e-06, Method: Composition-based stats.
Identities = 41/78 (52%), Positives = 50/78 (64%)
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
FD + P YG SR+ +++ + G RV K+NP DF+LWK S EP W SPWG GRP
Sbjct: 1 FDVPTDPTYGQLSRQDLEQLQAGARVDVVDVKRNPMDFVLWKMSKEGEPSWPSPWGEGRP 60
Query: 214 GWHIECSAMSSHYLGKVF 231
GWHIECSAM+ LG F
Sbjct: 61 GWHIECSAMNCKQLGNHF 78
>gi|197119575|ref|YP_002140002.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
gi|197088935|gb|ACH40206.1| methionyl-tRNA synthetase [Geobacter bemidjiensis Bem]
Length = 509
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 62/422 (14%), Positives = 109/422 (25%), Gaps = 83/422 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + E +I +
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKRLKGFD--VFFLTG-TD-----EHGQKVEKAAIAAGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNE 151
+ + ++F +L H + L + ++ G Y E +
Sbjct: 66 TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---------------HKKNPADFILWKR 196
+ K + T ++ H + DFI K
Sbjct: 126 YCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQPKS 185
Query: 197 STPMEPGW-------------ESPWGRGRPGWHIECSAMSSHYLGK-------------- 229
+ WG PG + L
Sbjct: 186 RRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYPDEQGNF 245
Query: 230 ----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D+H G D++ H A +G+ +EG+KMSKS N
Sbjct: 246 GKYWPCDVHLIGKDILRFHTVYWPTFLMAAG--LPIPKKVFAHGWWTVEGQKMSKSLQNV 303
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ N L++ + + + + + +
Sbjct: 304 VEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRSTAMLG 363
Query: 332 ILLSKWPQTSTSKGIIDPAVLSALY----------NDLNTVSAIQALHKLARESTKNHDL 381
Q + +D A DL A+QA+ ++ K D
Sbjct: 364 KYFGGVLQAPGEETDLDAAYREKTAAMIGQVDGFIEDLAFSRALQAIWEVISAGNKYIDE 423
Query: 382 LP 383
Sbjct: 424 TA 425
>gi|116073138|ref|ZP_01470400.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. RS9916]
gi|116068443|gb|EAU74195.1| Cysteinyl-tRNA synthetase, class Ia [Synechococcus sp. RS9916]
Length = 76
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 5/36 (13%)
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
F+ AD IR +L ++G L D +T W++
Sbjct: 45 NFAEADRIRNELTAQGIELIDKPGG-----ITEWRR 75
>gi|219118358|ref|XP_002179954.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217408211|gb|EEC48145.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 676
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 55/181 (30%), Gaps = 18/181 (9%)
Query: 273 LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
L R +K N+ +++ + K + +R + + I
Sbjct: 310 LSRRSGAKQTRNYRVADDIRDELKNDFNVFIEDRLRQWSVGGDFGPDQPGFDDMNRSYTI 369
Query: 333 LLSKWPQTSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
P T + ++ + D T AI+ L + +
Sbjct: 370 SAHSQPVTPADEALIITELEKRSEAKKSRDFETADAIR--DNLMDNFNVAVNDRLREWSI 427
Query: 389 AHILGIEVCKEHLN--------KNISIA----IEKLVQERLILLKMKKFSSADYIRKQLE 436
G+ N ++S + LV+ER + F++AD IR +LE
Sbjct: 428 GGEFGLPSKSNDKNRPFARRGGGDLSDEEVAIVTSLVEERDQAKGKRDFATADEIRDELE 487
Query: 437 S 437
+
Sbjct: 488 A 488
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 9/53 (16%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFILEDYKNPDNGQRMTRWK 458
+ L+ RL K +F AD IR L G + R W+
Sbjct: 111 ETVNSLIAARLQARKTGQFEEADGIRDDLLKIHGVSV--------WDREKTWR 155
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDY 445
IE L+ R + + + AD IR +L+ +ED
Sbjct: 306 IENLLSRRSGAKQTRNYRVADDIRDELKNDFNVFIEDR 343
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ I L+ ERL ++F AD +++QL S G + D
Sbjct: 209 SAITEDEIHALLAERLQYKMSRQFQDADRVQEQLLSNGVYVHD 251
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+++ + I+K + RL+ + + +AD +R +L
Sbjct: 520 FDEDTIVYIQKQLALRLVHKTNRDYEAADEVRDELRD 556
>gi|271965078|ref|YP_003339274.1| cysteinyl-tRNA synthetase-like protein [Streptosporangium roseum
DSM 43021]
gi|270508253|gb|ACZ86531.1| Cysteinyl-tRNA synthetase-like protein [Streptosporangium roseum
DSM 43021]
Length = 398
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 24/105 (22%), Positives = 37/105 (35%), Gaps = 11/105 (10%)
Query: 359 LNTVSAIQALHKLARESTK-----------NHDLLPIFNASAHILGIEVCKEHLNKNISI 407
NT A QA+ L E TK + I LG ++
Sbjct: 291 HNTAEATQAVLDLEAEITKWAADTEEDEGGVDEAREILRHLVTRLGRLADTSEPRDRLAP 350
Query: 408 AIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQ 452
+E L+ R L + + SAD +R+ L + G +ED +
Sbjct: 351 LVEPLLALRERLREQGAYDSADALREALAAGGVSIEDGPDGPRWT 395
>gi|188997460|ref|YP_001931711.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
gi|188932527|gb|ACD67157.1| methionyl-tRNA synthetase [Sulfurihydrogenibium sp. YO3AOP1]
Length = 628
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 59/184 (32%), Gaps = 15/184 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + +T D+ KI + A ++ S
Sbjct: 14 VNDVPHLGHAYTTVAADVLARYYRQIGVKTFF-----LTGTDEHGQKIQKTAEEKGIS-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ K F + +L +HI + ++ Q +G Y +
Sbjct: 67 ----PKELADKTHLAFKELWKKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLSEY 122
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + D + P + K+ F L K + + +E
Sbjct: 123 ESYYCVGCEEFKTETEIKDYDYKCPIHLKPCEKVKEESYFFRLSKYTDKLLEFYEKNPEF 182
Query: 211 GRPG 214
P
Sbjct: 183 ILPD 186
>gi|222055242|ref|YP_002537604.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
gi|221564531|gb|ACM20503.1| methionyl-tRNA synthetase [Geobacter sp. FRC-32]
Length = 509
Score = 57.0 bits (136), Expect = 6e-06, Method: Composition-based stats.
Identities = 25/156 (16%), Positives = 49/156 (31%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R E V + +T D+ K+ + A
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYRRLKGYE--VFF---LTGTDEHGQKVEKAANAAG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + ++F +L H + + ++++ G Y E
Sbjct: 65 --ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVSKIFKDVMEKGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + K + T ++
Sbjct: 123 EDWYCTPCETFWTETQLIDYKCPDCNRPTEKLKEES 158
>gi|322420739|ref|YP_004199962.1| methionyl-tRNA synthetase [Geobacter sp. M18]
gi|320127126|gb|ADW14686.1| methionyl-tRNA synthetase [Geobacter sp. M18]
Length = 509
Score = 57.0 bits (136), Expect = 7e-06, Method: Composition-based stats.
Identities = 62/427 (14%), Positives = 111/427 (25%), Gaps = 93/427 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + V + +T D+ K+ + A
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKRLMGFD--VFF---LTGTDEHGQKVEKAANAAG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + ++F +L H + L ++ G Y E
Sbjct: 65 --ETPLELADRVMKRFQSLWEKLEISHTDFIRTTQERHKKGVSVLFDRVMAKGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---------------HKKNPADFIL 193
+ + K + T ++ H + DFI
Sbjct: 123 EDWYCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQ 182
Query: 194 WKRSTPMEPGW-------------ESPWGRGRPG--------WHIECSAMSS-------- 224
K + WG PG W + +
Sbjct: 183 PKSRRNEIISFVKEGLRDLSVSRTTFEWGIPVPGNDKHVIYVWFDALTNYITALGYPDEE 242
Query: 225 ----HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
Y D+H G D++ H A +G+ +EG+KMSK
Sbjct: 243 GNFGKYW--PCDVHLIGKDILRFHTVYWPTFLMAAG--LPIPKRVFAHGWWTVEGQKMSK 298
Query: 281 SNGNFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQR 326
S N + N L++ + + + + + +
Sbjct: 299 SLQNVVEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALIHRINSDLANDLGNLLNRS 358
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSA----------LYNDLNTVSAIQALHKLAREST 376
Q + +D A D+ A+QA+ ++
Sbjct: 359 TAMLGKYFGGELQAPGEESELDKAYREKTLAMIGQVDGFIEDMAFSRALQAIWEVISAGN 418
Query: 377 KNHDLLP 383
K D
Sbjct: 419 KYIDETA 425
>gi|288818060|ref|YP_003432408.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787460|dbj|BAI69207.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751661|gb|ADO45144.1| methionyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 490
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 65/418 (15%), Positives = 113/418 (27%), Gaps = 83/418 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R V + +T D+ KI + A++ S
Sbjct: 12 VNDVPHIGHAYTTVAADVLARFYRQRGY--SVFF---LTGTDEHGLKIQKSAQERGIS-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+ +N + F K + HI + + +G Y+
Sbjct: 65 ----PKELADQNAENFKKLWKFMNISYDRFIRTTDEEHIKFVQEVFVKSYENGDIYKGEY 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQ----------------------------KMGTRVP 180
I +
Sbjct: 121 EGWYCVGCEEFKPESELLEGNICPVHLKPCEYVKEPSYFFRLSKYEEELIRLYEWHKDFI 180
Query: 181 EKYHKKNPADFIL---WKRSTPMEPGWESPWGRGRP--------GWHIECSAMSSHYLGK 229
+++N + K + P WG P W S +
Sbjct: 181 MPEYRRNEVISFVKQGLKDLSITRPSVRVKWGIEVPFDREQTIYVWFDALFNYISALYDR 240
Query: 230 VF----DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D+H G D++ H A +G+ +EG+KMSKS GN
Sbjct: 241 PHYWPADLHLVGKDILRFHAVYWPAFLMSVGYQVP--KSIFAHGWWKVEGKKMSKSLGNV 298
Query: 286 ITINELLETKKFGGRSW--------------------PAPVIRLAMLMTHYREPIDFTVQ 325
I ++++ + V L+ + + + V
Sbjct: 299 IDPYKMVQDYGLDEVRYFLLREVPFGQDGDITQEGLKNRLVGELSNQIGNLFSRVSSMVI 358
Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
R TE + K G + ++ +A++A+ KL+ K D
Sbjct: 359 RYTEGKASGEKDRSYEAFCGEVIKDHH-HRMEKVDFYNALEAVLKLSNFLNKYVDEKA 415
>gi|253699686|ref|YP_003020875.1| methionyl-tRNA synthetase [Geobacter sp. M21]
gi|251774536|gb|ACT17117.1| methionyl-tRNA synthetase [Geobacter sp. M21]
Length = 509
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 62/422 (14%), Positives = 109/422 (25%), Gaps = 83/422 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + E +I +
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKRLKGFD--VFFLTG-TD-----EHGQKVEKAAIAAGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNE 151
+ + ++F +L H + L + ++ G Y E +
Sbjct: 66 TPLELADRVMKRFQSLWEKLEISNTDFIRTTQERHKKGVSVLFERVMEKGDIYLGEYEDW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY---------------HKKNPADFILWKR 196
+ K + T ++ H + DFI K
Sbjct: 126 YCTPCETFWTETQLIDYKCPDCNRPTEKLKEESYFFRMSKYQDQLLAHIEANPDFIQPKS 185
Query: 197 STPMEPGW-------------ESPWGRGRPGWHIECSAMSSHYLGK-------------- 229
+ WG PG + L
Sbjct: 186 RRNEIISFVKEGLRDLSVSRTTFQWGIPVPGNDKHVVYVWFDALTNYITALGYPDEAGNF 245
Query: 230 ----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D+H G D++ H A +G+ +EG+KMSKS N
Sbjct: 246 GKYWPCDVHLIGKDILRFHTVYWPTFLMAAG--LPIPKKVFAHGWWTVEGQKMSKSLQNV 303
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ N L++ + + + + + +
Sbjct: 304 VEPNMLVDKYGVDAVRYFLLREVPFGLDGDFSHQALVHRINSDLANDLGNLLNRSTAMLG 363
Query: 332 ILLSKWPQTSTSKGIIDPAVLSALY----------NDLNTVSAIQALHKLARESTKNHDL 381
Q + +D A DL A+QA+ ++ K D
Sbjct: 364 KYFGGVLQAPGEETELDAAYREKTAAMIGQVDGFIEDLAFSRALQAVWEVISAGNKYIDE 423
Query: 382 LP 383
Sbjct: 424 TA 425
>gi|171920487|ref|ZP_02931504.2| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
27813]
gi|171902953|gb|EDT49242.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 1 str. ATCC
27813]
Length = 521
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 83/277 (29%), Gaps = 32/277 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DVL R R + + V + +T +D+ KI ++A +E N +
Sbjct: 20 PHIGHAYTTIIADVLARYKRLFGYD--VFF---LTGMDEHGQKIQQKAFEE------NIS 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F+ RL H + + + G Y +
Sbjct: 69 PKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
S NY K + M T+ E Y K K P +
Sbjct: 129 CVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYYQNHPNFII 188
Query: 207 PWGRGRPGW-----HIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADR 257
P R ++E ++S I +I+ + A ++
Sbjct: 189 PNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLTATGYLSNN 248
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
E W N + + + I L
Sbjct: 249 EELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLND 285
>gi|13357755|ref|NP_078029.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|170761906|ref|YP_001752278.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|183508737|ref|ZP_02958215.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186701992|ref|ZP_02971615.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
27818]
gi|25009406|sp|Q9PQU6|SYM_UREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|11356980|pir||C82922 methionyl-tRNA synthetase UU197 [imported] - Ureaplasma urealyticum
gi|6899162|gb|AAF30604.1|AE002119_9 methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
700970]
gi|168827483|gb|ACA32745.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 3 str. ATCC
27815]
gi|182675666|gb|EDT87571.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 14 str. ATCC
33697]
gi|186700768|gb|EDU19050.1| methionyl-tRNA synthetase [Ureaplasma parvum serovar 6 str. ATCC
27818]
Length = 521
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 83/277 (29%), Gaps = 32/277 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DVL R R + + V + +T +D+ KI ++A +E N +
Sbjct: 20 PHIGHAYTTIIADVLARYKRLFGYD--VFF---LTGMDEHGQKIQQKAFEE------NIS 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F+ RL H + + + G Y +
Sbjct: 69 PKALVDRNSIIFLNLWKRLNISFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
S NY K + M T+ E Y K K P +
Sbjct: 129 CVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYYQNHPNFII 188
Query: 207 PWGRGRPGW-----HIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADR 257
P R ++E ++S I +I+ + A ++
Sbjct: 189 PNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLTATGYLSNN 248
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
E W N + + + I L
Sbjct: 249 EELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLND 285
>gi|154253553|ref|YP_001414377.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
gi|154157503|gb|ABS64720.1| methionyl-tRNA synthetase [Parvibaculum lavamentivorans DS-1]
Length = 520
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 49/163 (30%), Gaps = 15/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A +I DV+ R R + V + +T +DD K+ + A+ + +
Sbjct: 18 GPPHIGHAYEVITTDVIARYKRLDGYD--VRF---LTGVDDHGQKMAQTAKAKGTT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +F+ RL H +L + I G Y
Sbjct: 69 --PQALADEMAPKFLAMDERLNISNDDFIRTTEARHEKACQHLWEKIAAKGDIYTGTYSG 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ Y + + + + ++
Sbjct: 127 WYSVRDEAFYDEDELTTGEGGQKLAPGTGTPVEWMEEETYFFR 169
>gi|219113979|ref|XP_002176172.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402885|gb|EEC42852.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 657
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 25/174 (14%), Positives = 50/174 (28%), Gaps = 18/174 (10%)
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
K N+ +++ + K + +R + + I P
Sbjct: 298 KQTRNYRVADDIRDELKNDFNVFIEDRLRQWSVGGDFGPDQPGFDDMNRSYTISAHSQPV 357
Query: 340 TSTSKG----IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
T + ++ + D T AI+ L + + G+
Sbjct: 358 TPADEALIITELEKRSEAKKSRDFETADAIR--DNLMDNFNVAVNDRLREWSIGGEFGLP 415
Query: 396 VCKEHLN---------KNISIAIE---KLVQERLILLKMKKFSSADYIRKQLES 437
N + + LV+ER + F++AD IR +LE+
Sbjct: 416 SKSNDKNRPFARRGGGELSDEEVAIVTSLVEERDQAKGKRDFATADEIRDELEA 469
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 18/53 (33%), Gaps = 9/53 (16%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLESK-GFILEDYKNPDNGQRMTRWK 458
+ L+ RL K +F AD IR L G + R W+
Sbjct: 111 ETVNSLIAARLQARKTGQFEEADGIRDDLLKIHGVSV--------WDREKTWR 155
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 13/43 (30%), Positives = 21/43 (48%)
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILED 444
+ I L+ ERL ++F AD +++QL S G + D
Sbjct: 209 SAITEDEIHALLAERLQYKMSRQFQDADRVQEQLLSNGVYVHD 251
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 8/37 (21%), Positives = 20/37 (54%)
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
+++ + I+K + RL+ + + +AD +R +L
Sbjct: 501 FDEDTIVYIQKQLASRLVHKTNRDYEAADEVRDELRD 537
>gi|167042815|gb|ABZ07533.1| putative tRNA binding domain protein [uncultured marine
microorganism HF4000_ANIW137I15]
Length = 665
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 57/334 (17%), Positives = 89/334 (26%), Gaps = 74/334 (22%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D+ HIG+A I DVL R + V +T D+ K+ A +
Sbjct: 14 VNDYPHIGHAYTTIAADVLARF--HRLAGTRVFL---LTGTDEHGQKVERAALDRGLT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
+ + ++ + RL H + L + + G Y E
Sbjct: 67 ----PQGLADRVVGRYHQLWDRLRIEPDDFIRTTEARHRKGVEDLFRRVQEKGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWES 206
S K E + + R PG+
Sbjct: 123 EGWYCTPDESFWTETQVVDGKCPECGRPVERVREESYFFRMSKYQDRLLRHLEEHPGFIL 182
Query: 207 P--------------------------WGRGRPG--------------WHIECSAMSSHY 226
P WG PG +I
Sbjct: 183 PESRRNEVIRFVEGGLRDLSISRTTFQWGIPVPGGQGHVLYVWFDALTNYISALGFGEKN 242
Query: 227 LGK------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
G+ D+H G D++ H A +G+ +EG+KMSK
Sbjct: 243 GGEGYETFWPADVHLIGKDILRFHAVYWPTFLMSA--ELPLPRRVFAHGWWTVEGQKMSK 300
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
S N + N LL+ + A +R +L
Sbjct: 301 SLRNVVEPNRLLDR-------YGADAVRYFLLRE 327
>gi|212724084|ref|NP_001132147.1| hypothetical protein LOC100193566 [Zea mays]
gi|194693568|gb|ACF80868.1| unknown [Zea mays]
Length = 170
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 24/99 (24%), Positives = 42/99 (42%), Gaps = 9/99 (9%)
Query: 363 SAIQALHKLARESTKNHDLLPIF--NASAHIL-GIEVCKEHLNKNISIAIEKLVQERLIL 419
IQAL L E +L + ++ A +L ++ +++ +++R +
Sbjct: 68 DYIQALIALETELKNKLSILGLMPSSSLAEVLKQLKDKSLKRAGLTEEQLQEQIEQRNVA 127
Query: 420 LKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
K K+F +D IRK L +KG L D T W+
Sbjct: 128 RKNKQFEISDGIRKNLATKGIALMD------EPSGTVWR 160
>gi|294950055|ref|XP_002786438.1| hypothetical protein Pmar_PMAR005139 [Perkinsus marinus ATCC 50983]
gi|239900730|gb|EER18234.1| hypothetical protein Pmar_PMAR005139 [Perkinsus marinus ATCC 50983]
Length = 479
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 1/43 (2%)
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQRMTRWK 458
++ F AD IR L++ G L D G +T W+
Sbjct: 433 NNARRVCNFKEADRIRDLLKANGIGLMDEPGGRGRGSEVTTWR 475
>gi|167586801|ref|ZP_02379189.1| cysteinyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 58
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
++ AD IR +L G LED T W++
Sbjct: 27 DYAEADRIRAELLEAGVALEDKPGGS-----TEWRR 57
>gi|269986151|gb|EEZ92464.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidiphilum
ARMAN-4]
Length = 483
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 62/432 (14%), Positives = 122/432 (28%), Gaps = 94/432 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ DV R + + V + +T D+ KI + A ++
Sbjct: 13 VNDKPHIGHAYTTIIADVFARW--HRLNNEKVFF---LTGTDEHGGKIEKAANEK----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
N + + +Q++ +L +H + I+ + G Y+
Sbjct: 63 -NKTPKELVDETSQKYKTTWEKLNISYDKFIRTTDKSHEETVKRFIKKVFEKGDIYKGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY--------------HKKNPADFILW 194
K + + ++ + N +
Sbjct: 122 EGFYCLPDERYITESELVGGKCPDCGRDVQKIKEEAYFFKLSKYKDQIINLINKGLILPE 181
Query: 195 KRSTP----------------MEPGWESPWG-----RGRPGWHIECSAMSSHYLGK---- 229
K + W + + + +S+
Sbjct: 182 KNANEILNRLKGELKDLDISRKSVSWGIKFPLDESHSVYVWFDALLNYLSALNWPDGSEF 241
Query: 230 ----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
DIH G ++++ H A AD + +G+ ++G+KMSKS GN
Sbjct: 242 KEFWPADIHLVGKEIVWFHSVIWPAMLMSAD--LPLPKNILAHGWWTVDGKKMSKSIGNV 299
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYR-EPIDFTVQRLTEAEI------------ 332
+ E+ + + A R +L E DF+ L E
Sbjct: 300 VDPIEIAD-------KYSADAFRYFLLREKPTWEDGDFSEAALKERINGELMSNLSNLVA 352
Query: 333 --------LLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP- 383
K + I + + + SA+ + + R+ K +
Sbjct: 353 RVLTLAEKFEGKIEGKPEIEDFIRKEEIIENFEKKDLYSALNLIFEGIRKINKYVNDKEP 412
Query: 384 ---IFNASAHIL 392
A++L
Sbjct: 413 WKLEGKNLANVL 424
>gi|163784145|ref|ZP_02179086.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
128-5-R1-1]
gi|159880589|gb|EDP74152.1| methionyl-tRNA synthetase alpha subunit [Hydrogenivirga sp.
128-5-R1-1]
Length = 633
Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 30/169 (17%), Positives = 55/169 (32%), Gaps = 15/169 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + +T D+ KI + A ++ +
Sbjct: 14 VNDVPHIGHAYTTVAADVLARYNRQKGIKTFF-----LTGTDEHGLKIQKSAEEKGIT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ + Q+F + L +HI + Y+ Q +G Y
Sbjct: 67 ----PKELADQTHQKFKELWQVLNISYDRFIRTTDEDHIKAVQYIFQKCYENGDIYLGKY 122
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
E + + +D + + + + F L K +
Sbjct: 123 EGWYCVGCEEFKTETEIKDLDYKCPIHQKKCEKIVEESYFFRLSKYTDK 171
>gi|185178808|ref|ZP_02964601.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188024305|ref|ZP_02996992.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|195867767|ref|ZP_03079768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|225551127|ref|ZP_03772073.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
gi|184209436|gb|EDU06479.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 5 str.
ATCC 27817]
gi|188018979|gb|EDU57019.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 7 str.
ATCC 27819]
gi|195660622|gb|EDX53878.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 9 str.
ATCC 33175]
gi|225378942|gb|EEH01307.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 8 str. ATCC
27618]
Length = 521
Score = 55.9 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 83/277 (29%), Gaps = 32/277 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DVL R R + + V + +T +D+ KI ++A +E N +
Sbjct: 20 PHIGHAYTTIIADVLARYKRLFGYD--VFF---LTGMDEHGQKIQQKAFEE------NIS 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F+ RL H + + + G Y +
Sbjct: 69 PKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
S NY K + M T+ E Y K K P +
Sbjct: 129 CVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYYQNHPNFII 188
Query: 207 PWGRGRPGW-----HIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADR 257
P R ++E ++S I +I+ + A ++
Sbjct: 189 PNERANEMINNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLTATGYLSNN 248
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
E W N + + + I L
Sbjct: 249 DELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLND 285
>gi|148265184|ref|YP_001231890.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
gi|146398684|gb|ABQ27317.1| methionyl-tRNA synthetase [Geobacter uraniireducens Rf4]
Length = 509
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R E V + +T D+ K+ + A
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKRLKGFE--VFF---LTGTDEHGQKVEKAANAAG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + ++F +L H + L ++ G Y E
Sbjct: 65 --ETPQELADRVMKRFQALWEKLDISYTDFIRTTQERHKKGVADLFTKVMGKGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + K + T ++
Sbjct: 123 EDWYCTPCETFWTETQLIDYKCPDCNRPTEKLKEES 158
>gi|288958659|ref|YP_003449000.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
gi|288910967|dbj|BAI72456.1| methionyl-tRNA synthetase [Azospirillum sp. B510]
Length = 519
Score = 55.9 bits (133), Expect = 2e-05, Method: Composition-based stats.
Identities = 52/322 (16%), Positives = 87/322 (27%), Gaps = 65/322 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R +R + V ++ TD + E +
Sbjct: 19 VNDVPHIGHAYTTLACDVLARFMRLDGYD--VKFLTG-TD-----EHGQKVEKSAEKAGI 70
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
A T + ++ F + + H+ + L + G Y +
Sbjct: 71 APQDFTDRVSRNFRDLVSLMNYSNDDFIRTTEPRHVKSVQALWTLLKDRGEIYLGSYAGW 130
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWE------ 205
+ YG E K + +K +
Sbjct: 131 YSVRDEAFYGEDELTTNPEGKKIAP-TGAECEWVEEPSYFFKLSAWQDRLIEFYERNPDF 189
Query: 206 ---------------------------SPWGRGRPG-----------------WHIECSA 221
WG PG +
Sbjct: 190 IAPAGKRNEVMAFVKSGLKDLSVSRTTFKWGIPVPGDDAHIMYVWLDALANYITAVGYPD 249
Query: 222 MSSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ Y D+H G D++ H A A ++ ++ H + +EG+KMSK
Sbjct: 250 TTGDYAKYWPADLHMVGKDILRFHAVYWPAFLMAA-GLQPPKRVFAHG-WWTIEGQKMSK 307
Query: 281 SNGNFITINELLETKKFGGRSW 302
S GN I L+ T +
Sbjct: 308 SLGNVIAPETLVTTYGLDQTRY 329
>gi|188524069|ref|ZP_03004160.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
gi|195659982|gb|EDX53362.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 12 str.
ATCC 33696]
Length = 521
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 83/277 (29%), Gaps = 32/277 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DVL R R + + V + +T +D+ KI ++A +E N +
Sbjct: 20 PHIGHAYTTIIADVLARYKRLFGYD--VFF---LTGMDEHGQKIQQKAFEE------NIS 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F+ RL H + + + G Y +
Sbjct: 69 PKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
S NY K + M T+ E Y K K P +
Sbjct: 129 CVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYYQNHPNFII 188
Query: 207 PWGRGRPGW-----HIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADR 257
P R ++E ++S I +I+ + A ++
Sbjct: 189 PNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLTATGYLSNN 248
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
E W N + + + I L
Sbjct: 249 EELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLND 285
>gi|171920815|ref|ZP_02931489.2| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|188518520|ref|ZP_03003990.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|198273255|ref|ZP_03205791.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209554038|ref|YP_002284592.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225550469|ref|ZP_03771418.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
gi|171903582|gb|EDT49871.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 13 str.
ATCC 33698]
gi|188997923|gb|EDU67020.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 11 str.
ATCC 33695]
gi|198249775|gb|EDY74555.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 4 str.
ATCC 27816]
gi|209541539|gb|ACI59768.1| methionyl-tRNA synthetase [Ureaplasma urealyticum serovar 10 str.
ATCC 33699]
gi|225379623|gb|EEH01985.1| methionine--tRNA ligase [Ureaplasma urealyticum serovar 2 str. ATCC
27814]
Length = 521
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 48/277 (17%), Positives = 83/277 (29%), Gaps = 32/277 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DVL R R + + V + +T +D+ KI ++A +E N +
Sbjct: 20 PHIGHAYTTIIADVLARYKRLFGYD--VFF---LTGMDEHGQKIQQKAFEE------NIS 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F+ RL H + + + G Y +
Sbjct: 69 PKALVDRNSIIFLNLWKRLHISFSKFIRTTQMDHEESVQKVFSYLYKQGKIYLGQWTGYY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
S NY K + M T+ E Y K K P +
Sbjct: 129 CVSCEENYNPAEIIKSQDNIMLCRMGHKLETKSEESYFYKMSDQAPFLKTYYQNHPNFII 188
Query: 207 PWGRGRPGW-----HIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADR 257
P R ++E ++S I +I+ + A ++
Sbjct: 189 PNERANEMVNNFLNNLEDLSISRTTFDWGIPIAENPKHVIYVWLDALMNYLTATGYLSNN 248
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLET 294
E W N + + + I L
Sbjct: 249 EELFQKYWCDNETEIVHLLSKEIARFHCIYWPIFLND 285
>gi|118580084|ref|YP_901334.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
gi|118502794|gb|ABK99276.1| methionyl-tRNA synthetase [Pelobacter propionicus DSM 2379]
Length = 506
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 11/153 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V + +T D+ + E + +
Sbjct: 14 VNDVPHIGHAYTTVAADVLARYKRLMGYD--VYF---LTGSDE---HGQKVEKAATTAGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNE 151
+ + +++ RL H + L I+ G Y E +
Sbjct: 66 TPLELADRVVKRYQALWERLGISNNDFIRTTQERHKKGVSQLFSLIMERGDIYLGEYEDW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + + ++
Sbjct: 126 YCTPCETFWPETQLIEDRCPDCNRPVEKLKEES 158
>gi|294881711|ref|XP_002769459.1| hypothetical protein Pmar_PMAR008958 [Perkinsus marinus ATCC
50983]
gi|239872918|gb|EER02177.1| hypothetical protein Pmar_PMAR008958 [Perkinsus marinus ATCC
50983]
Length = 50
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 18/41 (43%), Positives = 25/41 (60%), Gaps = 1/41 (2%)
Query: 43 NARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
+AR + FD+++R+ Y + Y NITDIDDKII A
Sbjct: 3 HARAYLTFDIIWRIPED-YFQYRFLYQMNITDIDDKIILEA 42
>gi|271962309|ref|YP_003336505.1| hypothetical protein Sros_0743 [Streptosporangium roseum DSM 43021]
gi|270505484|gb|ACZ83762.1| hypothetical protein Sros_0743 [Streptosporangium roseum DSM 43021]
Length = 437
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 8/46 (17%), Positives = 24/46 (52%)
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ + L ++R + ++ AD +R ++E++G+++ D +
Sbjct: 2 NEVPPHVTGLAEQRAKARAGRDYAGADALRDKIEAEGWLVRDTGDG 47
>gi|78223524|ref|YP_385271.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
gi|78194779|gb|ABB32546.1| methionyl-tRNA synthetase [Geobacter metallireducens GS-15]
Length = 509
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 48/156 (30%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + V + +T D+ K+ + A
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKRLKGYD--VFF---LTGTDEHGQKVEKAANAAG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + ++F +L H + +L + ++ G Y E
Sbjct: 65 --ETPLELADRVVKRFQALWEKLDISYNDFIRTTQERHKKGVTHLFREVMAKGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + K + ++
Sbjct: 123 EDWYCTPCETFWTETQLIDGKCPDCNRPVEKLKEES 158
>gi|117621375|ref|YP_857263.1| hypothetical protein AHA_2755 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
gi|117562782|gb|ABK39730.1| hypothetical protein AHA_2755 [Aeromonas hydrophila subsp.
hydrophila ATCC 7966]
Length = 60
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Query: 407 IAIEKLVQERLILLKMKKFSSAD-YIRKQLESKGF 440
IE+L+ +R K ++ AD R +L G
Sbjct: 2 AEIEQLIVQRNQARADKNWA-ADAAARNRLTEMGI 35
>gi|195952737|ref|YP_002121027.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
gi|195932349|gb|ACG57049.1| methionyl-tRNA synthetase [Hydrogenobaculum sp. Y04AAS1]
Length = 493
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 61/419 (14%), Positives = 110/419 (26%), Gaps = 83/419 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R + V + +T D+ K+ + A ++ +
Sbjct: 12 VNDVPHIGHAYTTIAADTIARYKRQKGFD--VFF---LTGTDEHGLKLQKAAEEKGMT-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ KN + F L H + +I + G Y+
Sbjct: 65 ----PKELCDKNFENFKNLWDFLKISYDHIIRTTDDYHKAYVQEVITKVYERGDIYKGYY 120
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + D + + K+ F L K + +E+ + +
Sbjct: 121 EGYYCVGCEEFKPESEIKDFDYSCPIHKKKCELIKEETYFFKLSKYQDKLLELYETDFIK 180
Query: 211 G-------------------------RPGWHIECSA-----------------MSSHYLG 228
R W IE + +
Sbjct: 181 PDYRKEEVIAFVRQGLKDLSITRPKERVSWGIELPFDKNHVIYVWFDALFNYISALKFKN 240
Query: 229 K----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
K D H G D++ H A D +G+ +EG+KMSKS GN
Sbjct: 241 KLEFWPADFHIVGKDILRFHAVYWPAFLMSLDMELP--KHVYAHGWWTVEGQKMSKSLGN 298
Query: 285 FITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEA 330
I +++ + ++ + + +
Sbjct: 299 VINPYDVVNEYGLDETRYFLLREVAFGQDGDFSKEAVKRRINGELANGIGNLISRTFAMC 358
Query: 331 EILLSKWPQTSTSKGIIDPAVLSAL------YNDLNTVSAIQALHKLARESTKNHDLLP 383
+ L N+L A++ + KL K D
Sbjct: 359 IKYGIIKKDDIKEDEDYKKIAIEVLEAFDKYMNELQFHKALEEVMKLVDYLNKYVDEKA 417
>gi|294890779|ref|XP_002773310.1| hypothetical protein Pmar_PMAR026560 [Perkinsus marinus ATCC 50983]
gi|239878362|gb|EER05126.1| hypothetical protein Pmar_PMAR026560 [Perkinsus marinus ATCC 50983]
Length = 479
Score = 55.1 bits (131), Expect = 3e-05, Method: Composition-based stats.
Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 417 LILLKMKKFSSADYIRKQLESKGFILEDYKNPDN-GQRMTRWK 458
++ F AD IR L + G L D G +T W+
Sbjct: 433 NNARRVCNFKEADRIRDLLRANGIGLMDEPGGRGKGSEVTTWR 475
>gi|219851353|ref|YP_002465785.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
gi|254782869|sp|B8GFL4|SYM_METPE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|219545612|gb|ACL16062.1| methionyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
Length = 663
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y H+G+ R + D+ R LR+ E V +V D I+ A
Sbjct: 9 TCGL-PYTNGPCHLGHLRTYVPGDMYVRYLRHRGEE--VVFVCG----SDNHGTPIVVSA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ-MIYLIQNIILH 142
++ + ++ K F + ++ ++Q +I
Sbjct: 62 EEQGVT------PKELSLKYHHHFEETFIKMGIRFDRFGMTDGKANHHRTREMMQRLIDK 115
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y A + T+ I ++ +
Sbjct: 116 GYIYSATVSQSYCTTCSRFLPDRYVEGICPHCGAVARGDECDQGCGKHL 164
>gi|282900792|ref|ZP_06308732.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
gi|281194322|gb|EFA69279.1| Methionyl-tRNA synthetase, class Ia [Cylindrospermopsis raciborskii
CS-505]
Length = 529
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 13/183 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R E V + IT D+ KI A+ + S
Sbjct: 20 VNDVPHIGSAYTTIAADTIARFQRLLGNE--VIF---ITGTDEHGQKIQRSAQSQGKSPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + H + + G Y +
Sbjct: 75 --EFCDQIVPSFIDLWQILNIQY---DRFSRTTDLKHQVIVKEFFHRVWEQGDIYRGEQK 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + + T ++ + F L K P+E ++S
Sbjct: 130 GWYCVSCEEFKEERELIEGKRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQSHPNFI 189
Query: 212 RPG 214
+P
Sbjct: 190 QPA 192
>gi|302038229|ref|YP_003798551.1| methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
gi|300606293|emb|CBK42626.1| Methionyl-tRNA synthetase [Candidatus Nitrospira defluvii]
Length = 663
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 42/321 (13%), Positives = 85/321 (26%), Gaps = 67/321 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS-- 89
V D HIG+A + DVL R R + V + +T +D+ K+ + A + +
Sbjct: 16 VNDVPHIGHAYTTVAADVLARYWRLRG--RDVFF---LTGLDEHGQKVQQAAAKAGVAPQ 70
Query: 90 -------------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ + + QQ
Sbjct: 71 AHCDRLAPQFTNLWQRLNISNDAFIRTTDKPHQAVVQRYLQQLYDKQLIYKADYTGWY-- 128
Query: 125 ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS-FSRRKIDEQKMGTRVPEKY 183
+ + +++G + I + + + ++ E +
Sbjct: 129 ---CTYDERFWTEKDVVNGLCPDCKRPIERLSEHNYFFKMGQYQERLIEHIRTHDDFIRP 185
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSA-----------------MSSHY 226
+ + + P + R W IE + Y
Sbjct: 186 VSRRNEVLGFLQTQKLGDLSISRP--KSRLSWGIELPFDKEYVTYVWFDALVNYVSALEY 243
Query: 227 LGK-----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
D H G D++ H + +G+ ++G KMSKS
Sbjct: 244 KPGLERFWPADAHLVGKDILTTHAVYWSTMLMAL--ERPLPHSIFAHGWWTVDGEKMSKS 301
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + N +++ +
Sbjct: 302 RGNVVDPNAMIDQFGADAFRY 322
>gi|294101616|ref|YP_003553474.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
gi|293616596|gb|ADE56750.1| methionyl-tRNA synthetase [Aminobacterium colombiense DSM 12261]
Length = 643
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 57/421 (13%), Positives = 101/421 (23%), Gaps = 86/421 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A I DV+ R R V + TD + + +
Sbjct: 15 VNDIPHIGHAYTTIAADVMARYRRMMG--DRVFFCTG-TD-----EHGQKIQQSADAKGM 66
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNE 151
+ + + F + L H + + + ++ G Y+
Sbjct: 67 TAKELADRTMENFRRLWEVLNISNDDFIRTTEERHEKVVQGIFKKLMDQGDIYKGTYEGW 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--------ILWKRSTPMEP- 202
+ S K + K + P
Sbjct: 127 YCIPCETYVPESSMKEDKTCPDCGRPLQKMEEESYFFRASKYSDQLLDYYEKNLKAIMPR 186
Query: 203 --------------------GWESPWGRGRPG---------------WHIECSAMSS--- 224
WG PG + C MS
Sbjct: 187 SRYNEIVSFVRSGLRDQSVSRTSIKWGIPVPGDEKHVVYVWFDALINYLTACGYMSDSEK 246
Query: 225 -HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+ H G D+I H A + ++ H + +EG KMSKS G
Sbjct: 247 LNIFWPSVH-HLVGKDIIRFHC-VIWPIMLIALGLNPPVTVFAHG-WWTVEGEKMSKSKG 303
Query: 284 NFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTE 329
N + E+ + + + L + + + + L
Sbjct: 304 NVVDPFEMADVYGVDPFRYFVLREVPFGLDGDFSEQAMVLRINSDLANDLGNLLNRTLQM 363
Query: 330 AEILLSKWPQTSTSKGIIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNH 379
+ T+ +D + + A++A+ L R K
Sbjct: 364 VKNFRDGIVPAPTNFESLDKEIETLLQSTFSQVEESMSCFAYEEALKAIWALIRRGNKYI 423
Query: 380 D 380
D
Sbjct: 424 D 424
>gi|298529104|ref|ZP_07016507.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
gi|298510540|gb|EFI34443.1| methionyl-tRNA synthetase [Desulfonatronospira thiodismutans
ASO3-1]
Length = 640
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 55/428 (12%), Positives = 104/428 (24%), Gaps = 94/428 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D + RL + +K + +T D DKI+E A +
Sbjct: 13 VNARPHLGHAYTTIVADSINRL--HRLRQKDTFF---LTGTDEHGDKIVEAAEKNGL--- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
A + + F + L H+ + + + +G Y
Sbjct: 65 ---APKEYADRISALFKEAWPWLEVENSAFIRTTDPEHVKCVQRFLNTVYENGDIYFGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL--WKRSTPMEPGWES 206
F + R ++ + L + P +
Sbjct: 122 GGHYCFGCECFYMEKELQDGLCPDHLEKPRYLKEENYFFRMTRYLPALREHILNHPEFIQ 181
Query: 207 P---------------------WGRGRPGWHIECSAMSS--------------------- 224
P + R W IE S+
Sbjct: 182 PERYRNEVLGMLGDELTDLCISRPKSRLTWGIELPFDSNFVTYVWFDALINYISALGWPH 241
Query: 225 -----HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
Y + H D++ PH A ++ + +H ++ KMS
Sbjct: 242 GEAFKRYWPGAY--HLVAKDILKPHAVFWPTMLMSA-GVDLYQGLRVHGY-WTVQEAKMS 297
Query: 280 KSNGNFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQ 325
KS GN + ++++ + + + + + +
Sbjct: 298 KSLGNVVQPMDMVDKYGLAPFRYFLLREMQFGLDASFSEEALVNRLNSDLANDLGNLCSR 357
Query: 326 RLTEAEILLSKWPQTSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARES 375
L + D V+ L+ D + L
Sbjct: 358 TLAMTNKYFQGLVPEKSGLSQEDQEVVDAGLTALDEYVRLFGDFQFSKGLSVLWAFIGRL 417
Query: 376 TKNHDLLP 383
K D
Sbjct: 418 NKYVDASA 425
>gi|26554387|ref|NP_758321.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
gi|26454397|dbj|BAC44725.1| methionyl-tRNA synthetase [Mycoplasma penetrans HF-2]
Length = 1087
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 17/181 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A ++ DVL R + E IT +D+ KI E+A++ +N
Sbjct: 584 PHIGHAFTTLIADVLTRYKKKLGYETFF-----ITGMDEHGQKIEEKAKE------LNLK 632
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA--NNEI 152
+ K + F L H + ++ Y
Sbjct: 633 PQELVDKYAKVFDNLWKLLGIEYSHFIRTTAEYHKNVVQETFSELLKKDFIYLGVWKGLY 692
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
R++ D++ ++ K+ + F+ K+ +
Sbjct: 693 CVSCEENYTKNIAVRKENDDKLYCAQLHPLIQKEEESYFLKIKQFKKYISSFLKDPNLVY 752
Query: 213 P 213
P
Sbjct: 753 P 753
>gi|15787610|gb|AAL06177.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 40
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R K F AD IR++L + L D + T W++
Sbjct: 1 RKRAKAQKDFLKADSIREELLKQKIALMDT------PQGTIWEK 38
>gi|290559069|gb|EFD92442.1| methionyl-tRNA synthetase [Candidatus Parvarchaeum acidophilus
ARMAN-5]
Length = 483
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 67/467 (14%), Positives = 133/467 (28%), Gaps = 114/467 (24%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A V DV R Y + V + +T D+ KI + A ++ +
Sbjct: 13 VNDKPHIGHAYTTFVADVFARW--YRLNGENVFF---LTGTDEHGGKIEKSALEKGKT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHA----- 145
+ +N+ ++ + +L H + +Q + +G
Sbjct: 66 ----PKELVDENSDKYRQVWEKLNISYNRFIRTTDYSHEKAVKLFLQKVWDNGDIYKGEY 121
Query: 146 ---YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD------------ 190
Y +E S + + + + ++ + K
Sbjct: 122 TGFYCLPDERYITESELLDGKCPTCGREVQKISEEAYFFRLSKYKDKIVDAITNGFIIPE 181
Query: 191 -------------------------FILWKRSTPME--PGWESPWGRGRPGWHIECSAMS 223
+ + W G
Sbjct: 182 KNANEILSRLNGELKDLDITRKNVSWGIKFPFDESHSVYVWFDALINYLSGLDWPDGENV 241
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+ DIH G ++++ H A A + + + ++G+KMSKS G
Sbjct: 242 KTFW--PADIHLVGKEIVWFHSVIWPAMLFSAG--IPVPKRIVAHAWWTVDGKKMSKSIG 297
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA------------- 330
N + +++E + A R + RE + +E+
Sbjct: 298 NVVNPIDMVE-------KYGADAFRYFL----IREKPVWDDGDFSESALKNRINGELMSD 346
Query: 331 ------------EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
E K +G ID + A +++ + SAI + + R+ K
Sbjct: 347 LSNLVARVLTLAEKFKGKITGNPDLEGFIDEEKVRAAFDNYDPYSAINLIFEGIRKVNKY 406
Query: 379 HDLLP------------IFNASAHILGIEVCKEHLNKNISIAIEKLV 413
+ ++NA I I + S IE+++
Sbjct: 407 FNDKKPWTLEGEDLSNVLYNAIEAIRIISIFLSPFMPETSEKIERML 453
>gi|144899823|emb|CAM76687.1| Methionyl-tRNA synthetase [Magnetospirillum gryphiswaldense MSR-1]
Length = 518
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 68/449 (15%), Positives = 121/449 (26%), Gaps = 99/449 (22%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ F P +Y V D HIG+A + DVL R R + V ++
Sbjct: 1 MSGSKKTFYVTTP----IYY----VNDKPHIGHAYTTLACDVLARFKRLDGYD--VKFLT 50
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHI 129
TD + E + + + N+ F + RL C H+
Sbjct: 51 G-TD-----EHGQKVEKSAETAGISPQALADMNSANFRELAARLNCSNDDFIRTTEPRHV 104
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFS----------------------- 166
+ L ++ G Y + E + YG
Sbjct: 105 ASVQALWNKLVQSGDIYLGHYEGWYSVRDEAFYGEDELVAGPNGGKLAPTGAPVEWVKEP 164
Query: 167 ---------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP---- 213
+ K+ + + K + + G P
Sbjct: 165 SYFFRLSAWQDKLLQWYEDNPDCVAPQSRRNEVMSFVKGGLQDLSVSRTSFKWGIPVPGD 224
Query: 214 -------------------GWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
G+ + + ++ D+H G D++ H A
Sbjct: 225 ADHVMYVWLDALTNYITAVGYPEQDGDYARYW---PADLHMVGKDIVRFHAVYWPAFLMA 281
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A I+ ++ H + EG+K+SKS GN I L+E + +R +L
Sbjct: 282 A-GIKPATRVFAHG-WWTNEGQKISKSVGNVIDPLGLIE-------KYGLDQVRYFLLRE 332
Query: 315 ----------HYREPIDFTVQRLTEAEILLSK-WPQTSTSKGIIDPAVLSALYNDLNTVS 363
H + + + L + + G P +D
Sbjct: 333 VPFGNDGDYSHRAMVMRMNSELANDYGNLAQRVLSMVGKNCGNAVPVHGDFNDDD---RE 389
Query: 364 AIQALHKLARESTKNHDLLPIFNASAHIL 392
+ A H L + D +F+ L
Sbjct: 390 MLDAAHGLLHKLRDAMD-RQLFHEGLEAL 417
>gi|68171729|ref|ZP_00545082.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
Sapulpa]
gi|88657921|ref|YP_507787.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
gi|67998851|gb|EAM85550.1| Methionyl-tRNA synthetase, class Ia [Ehrlichia chaffeensis str.
Sapulpa]
gi|88599378|gb|ABD44847.1| methionyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
Length = 506
Score = 54.3 bits (129), Expect = 5e-05, Method: Composition-based stats.
Identities = 25/136 (18%), Positives = 47/136 (34%), Gaps = 15/136 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ ++ D++ R +R V + IT D+ KI + A++
Sbjct: 13 VNDVPHIGHVYTTLISDIIARFMRLDG--HSVKF---ITGTDEHGQKIEKAAQER----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N ++ T + F + + T H ++ L Q + +G Y +
Sbjct: 63 -NMSLLDFTDNTSAVFRQLADVMNYSYDDFIRTTETRHKKTVVALWQRLCDNGAIYLGSY 121
Query: 151 EIIFDTSSIPNYGSFS 166
+ Y
Sbjct: 122 SGWYSVRDETFYQEKE 137
>gi|284046700|ref|YP_003397040.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
gi|283950921|gb|ADB53665.1| methionyl-tRNA synthetase [Conexibacter woesei DSM 14684]
Length = 501
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 52/326 (15%), Positives = 95/326 (29%), Gaps = 75/326 (23%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH-----PS 89
V H+G+A I DVL R +R + V ++ TD + +
Sbjct: 12 VNAQPHLGHAYTTIAADVLARHMRQRGED--VFFLTG-TD----------EHGEPVALAA 58
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY-- 146
+ A + +N +F + RL + H+ ++ ++Q I +GH Y
Sbjct: 59 DRLGLAPKELADRNAARFEEMMPRLNVSNDFFIRTSDPRHVKKVQEVMQRIHDNGHTYLG 118
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL---WKRSTPMEPG 203
+ + EK +R +P
Sbjct: 119 TYEGWFCPRCADFKGENEIAEGNTCPIHHIPLDREKEENWFFRLSTFQEPLERLYAEQPD 178
Query: 204 WESP------------------------WGRGRP-----------------------GWH 216
W +P + G P +
Sbjct: 179 WAAPPTRRNEALAFIRSGLRDVSLSRGKFTWGVPVTWDPSHVFYVWFDALLNYYTALSFA 238
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
E ++ + D+H G D++ H A AD + +G+L ++G
Sbjct: 239 REGEDLTERFW--PADLHVIGKDILKFHAVYWPAMLMAAD--LPLPRREMIHGYLLMDGE 294
Query: 277 KMSKSNGNFITINELLETKKFGGRSW 302
KMSKS GN + E+++ +
Sbjct: 295 KMSKSLGNVLDPFEVIDRFGTDALRY 320
>gi|291278499|ref|YP_003495334.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
gi|290753201|dbj|BAI79578.1| methionyl-tRNA synthetase [Deferribacter desulfuricans SSM1]
Length = 640
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 26/152 (17%), Positives = 49/152 (32%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + V + +T D+ KI + A+++ +
Sbjct: 15 VNDVPHIGHAYTTVAADVLARYKRLCGYD--VFF---LTGTDEHGQKIEQAAQKKGIT-- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ ++F +L H + + + + +G Y
Sbjct: 68 ----PKELADTVVERFKSLWVKLNISNDKFIRTTDEEHKKTVQKIFKKMQENGDIYLGEY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
E + T + + R K
Sbjct: 124 EGWYCTPCETYWTETQLLDGNHCPSCGRETHK 155
>gi|73667420|ref|YP_303436.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
gi|72394561|gb|AAZ68838.1| methionyl-tRNA synthetase [Ehrlichia canis str. Jake]
Length = 506
Score = 53.9 bits (128), Expect = 5e-05, Method: Composition-based stats.
Identities = 43/321 (13%), Positives = 83/321 (25%), Gaps = 63/321 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+ ++ D++ R +R V +V TD + E + N
Sbjct: 13 VNDVPHIGHVYTTLISDIIARFMRLDGY--NVKFVTG-TD-----EHGQKVEKAAQERNI 64
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
++ T+ + F + + H + L ++ + Y +
Sbjct: 65 SLLEFTNGTSAVFRQLADVMNYSYNDFVRTTEMRHKKAVTALWTSLCDNDMVYLGSYSGW 124
Query: 154 FDTSSIPNYGSFSRRK-------IDEQKMGTRVPEKYHKKNPADFILWKRSTPM-EPGWE 205
+ Y E + ++ P +
Sbjct: 125 YSVRDEAFYQEKELIDGKAPTGAEVEWIEEPSYFFRLSDFQEKLLTFYEEHPDFIIPKYR 184
Query: 206 SPWGRGRPGWHIECSAMSSH---------------------------------------- 225
++ ++S
Sbjct: 185 YNEVISFVKSGLKDLSVSRKNVVWGIKVPNDDEHVIYVWVDALANYLTVLGFPDVKSKDY 244
Query: 226 --YLG--KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
Y G +H G D++ H A A + +G+ EG+K+SKS
Sbjct: 245 QTYWGNDNSTVLHVVGKDILRFHAVYWPAILMAAG--LPLPKKILAHGWWTNEGQKISKS 302
Query: 282 NGNFITINELLETKKFGGRSW 302
GN I +L+E +
Sbjct: 303 LGNIIKPFDLVEEFGVDQLRY 323
>gi|225849056|ref|YP_002729220.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
gi|225643562|gb|ACN98612.1| methionyl-tRNA synthetase [Sulfurihydrogenibium azorense Az-Fu1]
Length = 626
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 33/184 (17%), Positives = 58/184 (31%), Gaps = 15/184 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I DV+ R R + +T D+ KI + A ++
Sbjct: 14 VNDVPHLGHAYTTIACDVMARYYRQKGVDTFF-----LTGTDEHGQKIQKAAEEKGI--- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ K F +L +HI + ++ Q +G Y A
Sbjct: 66 ---HPKELADKTHLSFKNLWEKLNISYDRFIRTTDPDHIKAVQHIFQKCYENGDIYLAEY 122
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + D + P + K+ F L K + + +E
Sbjct: 123 ESYYCVGCEEFKTETEIKDYDYKCPIHLKPCEKVKEESYFFRLSKYTEKLLEFYEKNPDF 182
Query: 211 GRPG 214
+P
Sbjct: 183 IQPD 186
>gi|268679313|ref|YP_003303744.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268617344|gb|ACZ11709.1| methionyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 642
Score = 53.9 bits (128), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 45/184 (24%), Gaps = 18/184 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D + R R E +T D+ KI E A+ +
Sbjct: 14 VNDVPHIGHAYTTIIADTMARYYRLKGYETFF-----LTGTDEHGQKIEEAAKSRGKTPQ 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
I+ K + + + H + Q + G Y+
Sbjct: 69 A--YADEISGKFRALWDE---FEISYDKFIRTTDAEHKAGVQKAFQVMFDKGDIYKGEYE 123
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ K L K + + S
Sbjct: 124 GHYCVSCETFFTDTQLVDEDKCPDCGKLTRLVKEESYFFK---LSKYQEDLIKWYNSDEK 180
Query: 210 RGRP 213
P
Sbjct: 181 CVLP 184
>gi|126179956|ref|YP_001047921.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|187647748|sp|A3CX39|SYM_METMJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|125862750|gb|ABN57939.1| methionyl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 664
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 24/169 (14%), Positives = 49/169 (28%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y HIG+ R + D R +R E V +V D I+ A
Sbjct: 9 TCGL-PYTNGPCHIGHLRTYVPADFYVRYMRRSGEE--VVFVCG----SDNHGTPIVISA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILH 142
QE + +++ + + F + R+ + + +++ +I +
Sbjct: 62 EQEGST------PRVLSERYHEHFYETFRRMDVVFDRFGMTDDAMNHETTRSIVERLIEN 115
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y + I ++ +
Sbjct: 116 GYVYAETVSQSYCPDCERFLPDRYVEGICPHCGAVARGDECDQGCGQHL 164
>gi|258591914|emb|CBE68219.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS) [NC10
bacterium 'Dutch sediment']
Length = 646
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 49/156 (31%), Gaps = 15/156 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I+ D + R + G + V + +T D DKI++ A Q
Sbjct: 15 VNATPHLGHAYTTILADTMARFKKLRLGPEQVYF---LTGTDEHGDKIVQAAAQGG---- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYE--A 148
++ + + F + RL + H + +Q I G Y
Sbjct: 68 --ESPQAYADRISGIFQETWKRLGLAPNQFIRTTSEPHKRAVQRFLQQIYDAGDIYFGEY 125
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
F K + + ++ +
Sbjct: 126 GGHYCFGCERFYTEKELQDSKCPDHQTVPAFIKEQN 161
>gi|289547973|ref|YP_003472961.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181590|gb|ADC88834.1| methionyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 489
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 25/143 (17%), Positives = 43/143 (30%), Gaps = 17/143 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D L R R E V + +T D+ KI + A ++
Sbjct: 12 VNDVPHIGHAYTTVAADTLARFYRMRGYE--VFF---LTGTDEHGLKIQKTAEEKGV--- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ +N F++ + +H + + Q G Y E
Sbjct: 64 ---HPKDLADQNASNFMELWRFMNISYDRFIRTTDPDHQEVVREMFQKSWERGDIYLGEY 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKID 171
+ K+
Sbjct: 121 EGWYCVGCEEFKSESELLEGKLC 143
>gi|157964833|ref|YP_001499657.1| methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
gi|157844609|gb|ABV85110.1| Methionyl-tRNA synthetase [Rickettsia massiliae MTU5]
Length = 508
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 60/180 (33%), Gaps = 11/180 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQQFTDQTSEIFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLENGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ + + T P ++ K+ F L K + +E+ RP
Sbjct: 126 YAVRDEAFFDESELTS--DGLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPDFIRP 183
>gi|85859641|ref|YP_461843.1| methionyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|85722732|gb|ABC77675.1| methionyl-tRNA synthetase / protein secretion chaperonin
[Syntrophus aciditrophicus SB]
Length = 644
Score = 53.5 bits (127), Expect = 8e-05, Method: Composition-based stats.
Identities = 54/321 (16%), Positives = 87/321 (27%), Gaps = 66/321 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A IV DVL R + + +T D DKI E A + S
Sbjct: 24 VNASPHIGHAYTTIVADVLARY--HRLSGHRTFF---LTGTDEHGDKIAEAAEKNGIS-- 76
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ + QF L+ NHI + ++ + G Y +
Sbjct: 77 ----PKAYADRISSQFRNLWPELSVSNDYFIRTTDANHIATVQAILSKVYEAGDIYFGHY 132
Query: 151 EIIFDTSSIPNYGS--------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
E + Y + E + + K K K +
Sbjct: 133 EGFYCVGCERFYTEKELIDGKCPDHQMEPEFRKESNYFFKMSKYQDWLISHIKANPDFIR 192
Query: 203 GWES-----------------PWGRGRPGWHIECSAMSSH-------------------- 225
+ R W I +++
Sbjct: 193 PERYRNEVLAFLREPLEDLCISRPKSRLAWGISLPFDANYVTYVWFDALINYITGLGYPD 252
Query: 226 ----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ H D++ PH A IE ++ +H N++ KMSKS
Sbjct: 253 GENFHTFWPVAQHLIAKDILKPHGIYWPTMLKAA-GIEPYRHLNVHGY-WNVDQSKMSKS 310
Query: 282 NGNFITINELLETKKFGGRSW 302
GN I +L + +
Sbjct: 311 LGNVIRPLDLKDKYGLDAFRY 331
>gi|282896532|ref|ZP_06304552.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
gi|281198638|gb|EFA73519.1| Methionyl-tRNA synthetase, class Ia [Raphidiopsis brookii D9]
Length = 533
Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/183 (17%), Positives = 55/183 (30%), Gaps = 13/183 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R E V + IT D+ KI A+ + S
Sbjct: 20 VNDVPHIGSAYTTIAADTMARFQRLLGNE--VIF---ITGTDEHGQKIQRSAQSQGKSPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + H + + G Y +
Sbjct: 75 --EFCDQIVPSFIDLWQILNIQY---DRFSRTTDLKHQAIVKEFFNRVWEQGDIYRGEQK 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + + T ++ + F L K P+E ++S
Sbjct: 130 GWYCVSCEEFKEERELIEGKRCPIHTTKEVEWRDEQNYFFRLSKYQKPLEEFYQSHPNFI 189
Query: 212 RPG 214
+P
Sbjct: 190 QPA 192
>gi|327398216|ref|YP_004339085.1| methionyl-tRNA synthetase [Hippea maritima DSM 10411]
gi|327180845|gb|AEA33026.1| Methionyl-tRNA synthetase [Hippea maritima DSM 10411]
Length = 621
Score = 53.2 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 72/430 (16%), Positives = 126/430 (29%), Gaps = 78/430 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG++ + D L R R + V + +T D+ KI + A+
Sbjct: 13 VNDVPHIGHSYTTLAADTLARYKRLLGED--VFF---LTGTDEHGQKIQKAAK------S 61
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + + F K +L H + + I G Y+
Sbjct: 62 ANTTPKQLADRVVENFKKLWKKLDITNNFFVRTTDDYHQKCVQEAFEYIYKKGDIYKGEY 121
Query: 151 EIIFDTSSIPNYGSF-----------------------------SRRKIDEQKMGTRVPE 181
E + Y + ++ E
Sbjct: 122 EGWYCIPCESYYSEIEIGENKTCPVCGRKLDLVKEESYFFKLSAYQDRLLEFYENNPDFV 181
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH-------------------IECSAM 222
+ K + + G P I C
Sbjct: 182 LPQTRYNEIKSFVKMGLKDLSITRTSFDWGIPVPFDDKHVIYVWFDALLNYVSAIGCRKG 241
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
+ D+H G D++ H A D + +G+ ++G+KMSKS
Sbjct: 242 DFDDIW-PADVHFVGKDILRFHAVYWPAFLMALD--LPLPKHVVAHGWWTVDGKKMSKSL 298
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQTS 341
GN + NE++E +P R +L + DF+ + L E +
Sbjct: 299 GNVVDPNEMIE-------KYPRDAYRYFLLRNVPFGLDGDFSEKELIERINSDLVNDFGN 351
Query: 342 TSKGIIDPAVLSALYNDLNTVSAI--QALHKLARESTKN-HDLLPIFNASAHILGIEVCK 398
+ + ++ SAI +L LA+E+ K D L +F ++ I
Sbjct: 352 LLNRSLT-MMEKYSKGNIRRPSAINDDSLSILAKETFKKVEDSLKVFRFDEALIAIFDFI 410
Query: 399 EHLNKNISIA 408
+ NK I+
Sbjct: 411 KSANKYIAQK 420
>gi|57167838|ref|ZP_00366978.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
gi|57020960|gb|EAL57624.1| methionyl-tRNA synthetase [Campylobacter coli RM2228]
Length = 628
Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/321 (12%), Positives = 77/321 (23%), Gaps = 65/321 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERAR------- 84
V D H+G+A I+ D L R R E + +T D+ KI + A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRL-----LTGTDEHGQKIEQAAKIRNSTPK 65
Query: 85 --QEHPSIPINDAISI------ITSKNTQQFVKDTTRLACLAPTHQ--PRATNHIPQMIY 134
+ S I ++ T + + L + +
Sbjct: 66 EYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGHYCI 125
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK------------ 182
++ + K+ + +
Sbjct: 126 SCESFFAKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDKEDPILPKNKKN 185
Query: 183 ------------------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
K + W + ++
Sbjct: 186 ELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDYQSQGENA 245
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKS 281
+ IH G D++ H A A + +G+ EG KMSKS
Sbjct: 246 KFW--PAHIHLVGKDILRFH-----AIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + E+++ +
Sbjct: 299 KGNVVKPKEVVDAYGLEAFRY 319
>gi|49475612|ref|YP_033653.1| methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
gi|49238419|emb|CAF27646.1| Methionyl-tRNA synthetase [Bartonella henselae str. Houston-1]
Length = 519
Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I DVL R R K V ++ TD + + ++ +
Sbjct: 16 GAPHIGHAYSAIASDVLARFQRLDG--KNVFFLSG-TD-----EHGLKMQQTAVALGITP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+T +N+ F K L C H + + + +G Y + +
Sbjct: 68 KQLTDRNSAVFQKMLAALNCSNNDFIRTTEKRHYQACQEIWKKMKANGDIYLSRYTGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y ++ + + N + +K
Sbjct: 128 VRQEAYYEEKDTEVGEDNIRREKELGSPVEWNEEESYFFK 167
>gi|305432137|ref|ZP_07401303.1| methionine--tRNA ligase [Campylobacter coli JV20]
gi|304444802|gb|EFM37449.1| methionine--tRNA ligase [Campylobacter coli JV20]
Length = 628
Score = 53.2 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 41/321 (12%), Positives = 77/321 (23%), Gaps = 65/321 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERAR------- 84
V D H+G+A I+ D L R R E + +T D+ KI + A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRL-----LTGTDEHGQKIEQAAKIRNSTPK 65
Query: 85 --QEHPSIPINDAISI------ITSKNTQQFVKDTTRLACLAPTHQ--PRATNHIPQMIY 134
+ S I ++ T + + L + +
Sbjct: 66 EYADKISSEFKKLWDEFEITYDIYARTTDTRHVEFVKAMFLKMWQKGDIYKDEYEGHYCI 125
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK------------ 182
++ + K+ + +
Sbjct: 126 SCESFFAKSQLINECGCPDCGKDTSLLKEESYFFKLSKYQDKILQWYDKEDPILPKNKKN 185
Query: 183 ------------------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
K + W + ++
Sbjct: 186 ELINFVQSGLKDLSITRTSFDWGIEIPEEIKDDKHIIYVWLDALFIYISSLDYQSQGENA 245
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKS 281
+ IH G D++ H A A + +G+ EG KMSKS
Sbjct: 246 KFW--PAHIHLVGKDILRFH-----AIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + E+++ +
Sbjct: 299 KGNVVKPKEVVDAYGLEAFRY 319
>gi|296116331|ref|ZP_06834947.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
gi|295977150|gb|EFG83912.1| methionyl-tRNA synthetase [Gluconacetobacter hansenii ATCC 23769]
Length = 512
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 49/321 (15%), Positives = 85/321 (26%), Gaps = 63/321 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A + DV+ R R + V ++ TD + E +
Sbjct: 14 VNGAPHIGHAYTSVAADVIARFKRLAGFD--VFFLTG-TD-----EHGQKVEQAAHTAGV 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNE 151
+ ++ F ++A H L + + +GH Y
Sbjct: 66 TPIELANRVAADFRDMYDKMAISYDDFIRTTQPRHAEGAAALWKKLEENGHIYLGAYEGW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST------PMEPGWE 205
+ T P ++ K+ F L K PG+
Sbjct: 126 YALRDECFYQEEELVIAADGTRTAPTGAPVEWVKEPSYFFRLSKFQDRLLELYETHPGFV 185
Query: 206 SP--------------------------WGRGRPGWHIECSAM----------------- 222
P WG PG +
Sbjct: 186 EPAGRRNEVRSFVRGGLRDLSISRTSFNWGIPVPGDPKHVMYVWVDALANYLSAVGYPDE 245
Query: 223 -SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + ++H G D++ H A A +G+ + G+KMSKS
Sbjct: 246 GAPRWDFWPANLHLVGKDILRFHAIYWPALLMGAG--LPLPERVFSHGWWTIAGQKMSKS 303
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + +L+ +
Sbjct: 304 LGNVLDPRDLVAEFGLDPVRF 324
>gi|95930673|ref|ZP_01313407.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
gi|95133325|gb|EAT14990.1| methionyl-tRNA synthetase [Desulfuromonas acetoxidans DSM 684]
Length = 510
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 11/153 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R + E V ++ TD + E +I +
Sbjct: 14 VNDVPHIGHAYTTLACDVLARYKKARGYE--VFFLTG-TD-----EHGQKVEKAAIAAGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---HAYEANNE 151
+ + Q+F +L + + + I + +
Sbjct: 66 TPLELADRVMQRFAALWQKLNIDNTDFIRTTQQRHKEGVQKMFTQIQEQGDIYLGAYEDW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + T ++
Sbjct: 126 YCTPCETFWTETQLIDGCCPDCGRPTDKLKEES 158
>gi|327401646|ref|YP_004342485.1| methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327317154|gb|AEA47770.1| Methionyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 665
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 49/169 (28%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + DV R L+ + V ++ D I+ A
Sbjct: 9 TCGL-PYANGKAHIGHLRTYVPADVYVRYLKMLGED--VIFICG----SDCHGTPIVVNA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILH 142
+E S + + F K + + H + ++ +I +
Sbjct: 62 EKEGIS------PRELVDRYHDHFQKVFKAIDIEFDFFGRTDSEYHHIRTQEFVKKLIEN 115
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ + E+ + I ++ +
Sbjct: 116 GYIFPKEIELAYCPKCQRFLPDRYVEGICPYCGSVARGDECDQGCGRHL 164
>gi|114776564|ref|ZP_01451609.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
gi|114553394|gb|EAU55792.1| methionyl-tRNA synthetase [Mariprofundus ferrooxydans PV-1]
Length = 512
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 57/355 (16%), Positives = 101/355 (28%), Gaps = 77/355 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I DVL R R + V + +T +D+ K+ + A
Sbjct: 13 VNDEPHLGHIYTTIAADVLARYQRMAG--RDVFF---LTGVDEHGQKVQQAAEARGIE-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + +++ LA ++ H + + + + G Y
Sbjct: 66 ----PIELADQVVERYQSLWPELAITNDDFIRTSSDRHRRGVQAMWRRLENAGAIYKGFY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR--------STPM 200
+ + + E+K K +
Sbjct: 122 EDWYCVPCETYWTETQLNDADCWEEKHCPDCKRAVEKVQEESYFFRLSAYQDRLLEYINA 181
Query: 201 EPGWESP--------------------------WGRGRPG--------------WHIECS 220
P + P WG PG ++
Sbjct: 182 NPDFIGPASRRNEVLRFVESGLNDLSVSRTTFSWGVPVPGDEKHVIYVWIDALTNYLSAL 241
Query: 221 AMSSHYLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
L K + +H G D++ H AD +G+ +EG KM
Sbjct: 242 GFPDQELPKYWPADVHLIGKDILRFHAIYWPCMLMAAD--LPLPQRLFAHGWWTVEGEKM 299
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEI 332
SKS GN + +LLE + A VIR +L + + DF+ + +
Sbjct: 300 SKSKGNALRPADLLE-------QYDADVIRYFLLREVPFGQDGDFSFSAMKQRYN 347
>gi|39997330|ref|NP_953281.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|39984221|gb|AAR35608.1| methionyl-tRNA synthetase [Geobacter sulfurreducens PCA]
gi|298506267|gb|ADI84990.1| methionyl-tRNA synthetase [Geobacter sulfurreducens KN400]
Length = 510
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 45/153 (29%), Gaps = 11/153 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R + E V ++ TD + E + +
Sbjct: 14 VNDVPHIGHAYTTLAADVLARYKKLKGYE--VFFLTG-TD-----EHGQKVEKAANTAGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNE 151
+ + ++F +L H + ++ I+ G Y E +
Sbjct: 66 TPLELADRVVKRFQGLWEKLDIQYTDFIRTTQERHKKGVSHIFTKIMAQGDIYLGEYEDW 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ K + ++
Sbjct: 126 YCTPCETFWTETQLIDGKCPDCNRPVDKLKEES 158
>gi|119512207|ref|ZP_01631297.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
gi|119463173|gb|EAW44120.1| methionine-tRNA ligase [Nodularia spumigena CCY9414]
Length = 533
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I DV+ R R E + IT D+ KI +R+ + P
Sbjct: 20 VNDVPHVGSAYTTIAADVVARFHRLLGHEVLL-----ITGTDEHGQKI-QRSAES-LGKP 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + + A+ H + + G Y+ +
Sbjct: 73 PQEFCDQIVPSFIKLWQLLNIQY---DRFSRTTASRHEAIVKEFFMRVWEKGDIYQGKQK 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + + T ++ + F L K T +E ++S
Sbjct: 130 GWYCVSCEEFKEERDLLEGKRCPIHTNKEVEWRDEQNYFFSLSKYQTQLEEFYQSRPDFI 189
Query: 212 RP 213
+P
Sbjct: 190 QP 191
>gi|52550379|gb|AAU84228.1| methionyl-tRNA synthetase [uncultured archaeon GZfos3D4]
Length = 541
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 31/321 (9%), Positives = 76/321 (23%), Gaps = 31/321 (9%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHP 88
P V HIG+ R + D+ R+LR + V ++ D I+ A +
Sbjct: 16 PYVNGECHIGHLRTYVPADIYVRMLRKMGYD--VIFISG----SDTHGTPIVLSAEAQGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
+ + K + F + L + R + + +
Sbjct: 70 T------PEEVVKKYHEHFKRMFQALNV-NFDYYGRTDS-------ESNHRRTTEIVKKL 115
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ + + D +EPG
Sbjct: 116 IENGYVHKKETKQAFCNTCGRFLPDRYVEGKCPYCGAVARGDECDQGCGKHLEPGEIIEP 175
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGL-DLIFPHHENEIAQSCCADRIEKTANIWIH 267
C + + + F + D + + +N + ++ +
Sbjct: 176 RCKL------CGSKADFKQQEHFFFNLSSFADFLIAYLDNIGGTLNARNYAKEWVKKELR 229
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
+ + K G + + G S+ ++ +R+ +
Sbjct: 230 DWCVTRNLEWGVKFPGRDELVVYVWVDAPIGYISFTEELLNYTTDENDWRKYWKGNEATI 289
Query: 328 TEAEILLSKWPQTSTSKGIID 348
+ ++
Sbjct: 290 VHFIGTDIIYHHCIFWPAMLK 310
>gi|15606482|ref|NP_213862.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
gi|7388279|sp|O67298|SYM_AQUAE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|78101749|pdb|2CSX|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met)
gi|78101750|pdb|2CSX|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met)
gi|78101753|pdb|2CT8|A Chain A, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met) And
Methionyl-Adenylate Anologue
gi|78101754|pdb|2CT8|B Chain B, Crystal Structure Of Aquifex Aeolicus Methionyl-Trna
Synthetase Complexed With Trna(Met) And
Methionyl-Adenylate Anologue
gi|2983692|gb|AAC07256.1| methionyl-tRNA synthetase alpha subunit [Aquifex aeolicus VF5]
Length = 497
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 46/312 (14%), Positives = 82/312 (26%), Gaps = 51/312 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I D + R Y + V + +T D+ KI ++A + S
Sbjct: 16 VNDVPHLGHAYTTIAADTIARY--YRLRDYDVFF---LTGTDEHGLKIQKKAEELGISPK 70
Query: 92 INDA---------ISIITSKNTQQFV----KDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+ + T+ + + R ++ +
Sbjct: 71 ELVDRNAERFKKLWEFLKIEYTKFIRTTDPYHVKFVQKVFEECYKRGDIYLGEYEGWYCV 130
Query: 139 -----------IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
H S S + K+ E + +
Sbjct: 131 GCEEFKSEAELAEDHTCPIHQKKCEYIKEPSYFFRLSKYQDKLLELYEKNPEFIQPDYRR 190
Query: 188 PADFILWK--------RSTPMEPGWESPWG----RGRPGWHIECSAMSSHYLGK-----V 230
K W P W S K
Sbjct: 191 NEIISFVKQGLKDLSVTRPRSRVKWGIPVPFDPEHTIYVWFDALFNYISALEDKVEIYWP 250
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
D+H G D++ H A E ++ H + +EG+KMSK+ GN + E
Sbjct: 251 ADLHLVGKDILRFHTVYWPAFLMSL-GYELPKKVFAHG-WWTVEGKKMSKTLGNVVDPYE 308
Query: 291 LLETKKFGGRSW 302
+++ +
Sbjct: 309 VVQEYGLDEVRY 320
>gi|308177197|ref|YP_003916603.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
gi|307744660|emb|CBT75632.1| methionine--tRNA ligase [Arthrobacter arilaitensis Re117]
Length = 516
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 53/420 (12%), Positives = 105/420 (25%), Gaps = 81/420 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A ++ DV+ R R + V ++ TD + + + +
Sbjct: 21 PHIGHAYEVVATDVMARFKRLDGYD--VFFMTG-TD-----EHGQKMMQTAEKLEITPAQ 72
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ F L +H L + + + Y +
Sbjct: 73 LAQRNSDAFQSMNDELGTSYDRFIRTTDADHHAAAQELWRRMEANDDIYLDKYAGWYSVR 132
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGWESPWGRGRPG 214
Y ++ + + L K + + G P
Sbjct: 133 DEAFYTEEQTEVREDGIRYAAETDTEVTWTEEESYFFRLSKYQDKLLDYYRDNPEFGAPR 192
Query: 215 -------WHIECSAMSSHYLGKVF------------------------------------ 231
+E F
Sbjct: 193 SRFNEVVRFVESGLTDLSISRTTFDWGIPVPGNEKHVMYVWVDALTNYLTGVGFPDVDSA 252
Query: 232 --------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
D+H G D+ H A A + +GFL+ G KMSKS G
Sbjct: 253 SFKKYWPADVHVIGKDISRFHAIYWPAFLMSA--KLPLPKRVMIHGFLHNNGVKMSKSLG 310
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI----------L 333
N ++ ++ + + + + ++ + +
Sbjct: 311 NTVSPDDFVNRYGLDQVRY------FFLREVPFGADGNYNHETIVARINGDLANNFGNLA 364
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
+ + G + P D + A L ++ RE+ + A H+LG
Sbjct: 365 QRSLSMVAKNCGGVVPTPAELSEADNAILDAAGQLLEINREAYSRQEFSKALEAVWHVLG 424
>gi|284161342|ref|YP_003399965.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284011339|gb|ADB57292.1| methionyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 661
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/169 (15%), Positives = 50/169 (29%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R I DV R LR + V ++ D I+ A
Sbjct: 5 TCGL-PYANGKAHIGHLRTYIPADVYVRYLRLLG--EKVLFICG----SDCHGTPIVVNA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLIQNIILH 142
+E S + + + F K L + + + +++ ++
Sbjct: 58 EKEGIS------PKELVDRYHEHFQKVFKELEVEFDFYGRTDAEYNHRRTQEIVKTLMDK 111
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y E+ + I ++ +
Sbjct: 112 GYIYAKEIELAYCPKCDRFLPDRYVEGICPYCGAVARGDECDQGCGRHL 160
>gi|154150363|ref|YP_001403981.1| methionyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
gi|187647736|sp|A7I6H7|SYM_METB6 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|153998915|gb|ABS55338.1| methionyl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 662
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 48/180 (26%), Gaps = 27/180 (15%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y H+G+ R + D R +R E V +V D I+ A
Sbjct: 9 TCGL-PYTNGPCHLGHLRTYVPADCYVRYMRRTGEE--VVFVSG----SDNHGTPIVVSA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
++ + ++ + + F + R+ +H +
Sbjct: 62 EEQGTT------PRALSEQYHRHFDETFRRMGVSF--------DHFGMTDDPACHHRTQD 107
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
+ + ++ + + K+ D +EPG
Sbjct: 108 IVQRLVDNGYVYKQVVNQAYCPKCKRFLPDRYVEGICPYCGKQARGDECDQGCGKHLEPG 167
>gi|296109584|ref|YP_003616533.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
gi|295434398|gb|ADG13569.1| methionyl-tRNA synthetase [Methanocaldococcus infernus ME]
Length = 639
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 46/137 (33%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+ R I D+LY+ L+ E V +V TD + I+ RA +E
Sbjct: 16 HLGHVRSTYIPADILYKYLKLRGEE--VIHVGG-TDNHGV--PILLRAEKEGKK------ 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I ++ +D L + HI ++ +G+ YE E +
Sbjct: 65 PEEIVEYYHKRIKEDLDSLGIEFDVFGKTHSEIHIKTAQEFYLKLVENGYIYEKEIEQFY 124
Query: 155 DTSSIPNYGSFSRRKID 171
+ +
Sbjct: 125 CENCKKFLPDRYVEGLC 141
>gi|313672884|ref|YP_004050995.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
gi|312939640|gb|ADR18832.1| methionyl-tRNA synthetase [Calditerrivibrio nitroreducens DSM
19672]
Length = 636
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 48/134 (35%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DV+ R R + V + +T D+ KI A ++ +
Sbjct: 15 VNDVPHIGHAYTTVAADVISRYKRLSGYD--VFF---LTGTDEHGQKIEMAAEKQGIT-- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ K ++F +L H + Y+ + ++ +G Y+
Sbjct: 68 ----PKQLADKVVERFKNLWIKLNISYDKFIRTTDDYHKKSVQYIFKKMMDNGDIYQGEY 123
Query: 151 EIIFDTSSIPNYGS 164
E + T +
Sbjct: 124 EGWYCTPCETYWTE 137
>gi|282901323|ref|ZP_06309249.1| hypothetical protein CRC_02722 [Cylindrospermopsis raciborskii
CS-505]
gi|281193818|gb|EFA68789.1| hypothetical protein CRC_02722 [Cylindrospermopsis raciborskii
CS-505]
Length = 520
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 66/349 (18%), Positives = 115/349 (32%), Gaps = 41/349 (11%)
Query: 34 TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--------KIIERARQ 85
T H+G+ R +++ DV+YR L++ TY +DD K ++R +
Sbjct: 22 TPSGRVHVGSLRGVVIHDVIYRALKHAGKPVKFTY-----GVDDYDALDTVPKYLDR--E 74
Query: 86 EHPS---------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
+ S + +F + L T+ R ++ I
Sbjct: 75 KFKSYLGFPLCNVPSPGEGAPDYAKYFIGEFFEIFEYLGIQPETYFLRDLYRSGKLNSHI 134
Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
+ + H + + N+ F + K+ T V Y+
Sbjct: 135 NIFLKNAHLVRQVYKQVSKADRPENWYPFQVICENCGKIATTVVTDYNGSEVFYTCQPNS 194
Query: 197 STPM----EPGWESP-WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQ 251
+ + GW SP G G+ W +E + + I G D ++A
Sbjct: 195 TNYVQGCGHSGWVSPLNGNGKLPWKVE---WVAKWDVLGVTIEMAGKDHSQKGGSRDVAN 251
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
+ C +EK F+ + G KMS S G + E+ P ++R M
Sbjct: 252 AICRQVLEKQPPFHSPYEFILVNGTKMSSSKGVGSSAREI-------ANLLPPELLRFLM 304
Query: 312 LMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
L T R I+F E L + T SK ++P + L +
Sbjct: 305 LRTQPRTVINFAP--NYETITRLFRDYDTLISKYEVNPELTEELMSLFY 351
>gi|11499048|ref|NP_070282.1| methionyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
gi|3122911|sp|O28819|SYM_ARCFU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|2649118|gb|AAB89796.1| methionyl-tRNA synthetase (metS) [Archaeoglobus fulgidus DSM 4304]
Length = 658
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/169 (16%), Positives = 51/169 (30%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AH+G+ R + DV R LR E V +V D I+ A
Sbjct: 5 TCGL-PYANGKAHVGHLRTYVPADVYVRYLRMSGEE--VVFVCG----SDCHGTPIVVNA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
Q+ S + + F+K L + + H + +++ +I
Sbjct: 58 EQQGLS------PKELVDIYHEHFIKIFDALNIKFDFYGRTDSDYHHHRTTEIVKRLIEK 111
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y ++ + I ++ +
Sbjct: 112 GYVYPKEIQLAYCPKCQRFLPDRYVEGICPYCGALARGDECDQGCGRHL 160
>gi|301060390|ref|ZP_07201253.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
gi|300445586|gb|EFK09488.1| methionine--tRNA ligase [delta proteobacterium NaphS2]
Length = 642
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 42/156 (26%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A IV DVL R + + +T D DKI+ A
Sbjct: 14 VNAEPHIGHAYTTIVADVLNRFHKLAGFDTFF-----LTGTDEHGDKIVAAAENAG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
T + + F RL H + ++ + Y
Sbjct: 65 --QTPKQYTDRISAMFQGLWPRLNISNSAFIRTTDAYHQETVRNILSLVKEKDDIYFSEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
F K + + V ++ +
Sbjct: 123 EGLYCFGCERFYTEKELVDGKCPDHQKEPDVIKEAN 158
>gi|22298292|ref|NP_681539.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
gi|25009348|sp|P59081|SYM_THEEB RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|22294471|dbj|BAC08301.1| methionyl-tRNA synthetase [Thermosynechococcus elongatus BP-1]
Length = 529
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/195 (16%), Positives = 56/195 (28%), Gaps = 14/195 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I DVL R R + V + IT D+ KI A+Q S
Sbjct: 14 VNALPHIGSAYTTIAADVLARFYRLQGYQ--VRF---ITGTDEHGQKIERTAQQRGLSPQ 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I + + + + T PR + + Q + +G Y +
Sbjct: 69 A--HCDEIAAGFQALWQQLNIHYDRFSRTTSPRHHAIVNEFF---QRVWDNGDIYLGQQQ 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-PWGR 210
+ + + ++ + F L K + + P
Sbjct: 124 GWYCVECEEFKEERELLEGRRCPIHVNRTVEWRDERNYFFRLSKYQQALLDHYAEHPDFV 183
Query: 211 GRPGWHIECSAMSSH 225
P E +
Sbjct: 184 QPPSRRNEVLSFIER 198
>gi|332295077|ref|YP_004437000.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
gi|332178180|gb|AEE13869.1| Methionyl-tRNA synthetase [Thermodesulfobium narugense DSM 14796]
Length = 508
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/145 (17%), Positives = 45/145 (31%), Gaps = 17/145 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R K V + +T D+ KI ++A + + S
Sbjct: 14 VNDKPHIGHAYTTVACDVLARFRRLQG--KDVFF---LTGTDEHGRKI-QKAAENNSS-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + F L H + Q + +G Y +
Sbjct: 66 ---DAKSYVDRFAKIFQDAWLALNISNDDFIRTTQERHYKAVAKFWQIVNDNGDIYKGKY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQ 173
+ + + K +
Sbjct: 123 SGWYCVPCETFFSDEQLVDGKCPDC 147
>gi|167540086|ref|XP_001741538.1| cysteinyl-tRNA synthetase [Entamoeba dispar SAW760]
gi|165893954|gb|EDR22069.1| cysteinyl-tRNA synthetase, putative [Entamoeba dispar SAW760]
Length = 274
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/145 (18%), Positives = 49/145 (33%), Gaps = 25/145 (17%)
Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN----------HDL 381
L +K + + SAL N+ +T +A+ L L R+ +
Sbjct: 13 PLDAKDRDFLATLETRRKGIHSALCNNFDTATAMNHLFALIRKCNEYLSSTSSTLLLRSA 72
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEK----LVQERLILLKMKK---FSSADYIRKQ 434
L + GIE + + + + ++ + R +K K + D +R +
Sbjct: 73 LYYIQKMLKVFGIEEKQVSSSSDNAPLLDTWCSFRTEVRKEAIKSKNTNILNLCDKVRDE 132
Query: 435 -LESKGFILEDYKNPDNGQRMTRWK 458
L G +ED T WK
Sbjct: 133 DLPKIGVRVED-------DGKTAWK 150
>gi|15669449|ref|NP_248259.1| methionyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
gi|2501034|sp|Q58659|SYM_METJA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|1591898|gb|AAB99269.1| methionyl-tRNA synthetase (metS) [Methanocaldococcus jannaschii DSM
2661]
Length = 651
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 45/137 (32%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++Y+ L+ + V +V TD + I A +E S
Sbjct: 17 HLGHARSTYIPADIIYKYLKLRGED--VIHVGG-TDNHGV--PITLTAEKEGKS------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I K + +D L + HI + +G+ YE E +
Sbjct: 66 PEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
+ I
Sbjct: 126 CPNCKKFLPDRYVEGIC 142
>gi|291541997|emb|CBL15107.1| methionyl-tRNA synthetase [Ruminococcus bromii L2-63]
Length = 648
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 53/423 (12%), Positives = 104/423 (24%), Gaps = 92/423 (21%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ + D + R R + V +T D+ KI ++A ++ +
Sbjct: 20 PHIGHCYTTVACDSIARYRRMQGYD-----VMFLTGTDEHGLKIEQKAAEKGVT------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYE--ANNE 151
+ + F + R T HI + + + + G+ Y+ +
Sbjct: 69 PKEYVDEIVKTFKGLWKFMNIS-YDRYIRTTDDYHIETVQKIFKELYDKGYIYKGEYKGK 127
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST---------PMEP 202
S K E ++ + P
Sbjct: 128 YCTPCESFWTESQLIDGKCPECGREVTEAKEEAYFFKMSPFADRIEKLLTETDYLQPKTR 187
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVF------------------------------- 231
E +PG C + ++ G
Sbjct: 188 AVELVNNFIKPGLEDLCVSRTTFKWGIPVTFDEKHIVYVWVDALSNYISALGYKNEKFDE 247
Query: 232 -------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H D++ H A D +G++ G+KMSKS GN
Sbjct: 248 FDKYWPADVHMVAKDIMRFHAIIWPAMLMALD--LPLPKHLAVHGWITFNGQKMSKSLGN 305
Query: 285 FITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ L E + ++ + + + +
Sbjct: 306 VVDPFVLGERYGADAIRYHIMREMALGADSAFSNEIMINRINSDLANGLGNLVSRTVAMV 365
Query: 331 EILLSKWPQTSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARESTKNHD 380
+ T G D ++ + +A+ + KL + K D
Sbjct: 366 QKYFGGTLPTERESGEFDDDLIETATSLRAKVDDFMDKTQLQNALAEIFKLVSRANKYID 425
Query: 381 LLP 383
Sbjct: 426 ETA 428
>gi|238651000|ref|YP_002916856.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
gi|238625098|gb|ACR47804.1| methionyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
Length = 508
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVRDEAFFDE 136
>gi|33322800|gb|AAQ07135.1|AF496446_1 cysteinyl-tRNA synthetase [Lactobacillus delbrueckii subsp. lactis]
Length = 44
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/43 (67%), Positives = 33/43 (76%)
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
E W+SPWG+GRPGWHIEC+ MS+ YLG DIHGGG DL F
Sbjct: 2 DEIAWDSPWGKGRPGWHIECAVMSTKYLGDTLDIHGGGQDLEF 44
>gi|288932631|ref|YP_003436691.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288894879|gb|ADC66416.1| methionyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 658
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/169 (17%), Positives = 50/169 (29%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R I DV R LR E V +V D I+ A
Sbjct: 5 TCGL-PYANGKAHIGHLRTYIPADVYVRYLRLRGEE--VIFVCG----SDSHGTPIVVNA 57
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
Q+ + + F + L + + H + +++ +I
Sbjct: 58 EQQGLK------PKELVDIYHKHFQEIFKSLRVEFDFYGRTDSDYHHERTREIVKKMIEK 111
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y E+ + + I ++ +
Sbjct: 112 GYVYPKEIELAYCPNCERFLPDRYVEGICPYCGAEARGDECDQGCGRHL 160
>gi|157828900|ref|YP_001495142.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165933624|ref|YP_001650413.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
gi|157801381|gb|ABV76634.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila
Smith']
gi|165908711|gb|ABY73007.1| methionyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
Length = 508
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVRDEAFFDE 136
>gi|20092839|ref|NP_618914.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
gi|25009364|sp|Q8TIU5|SYM_METAC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|19918142|gb|AAM07394.1| methionyl-tRNA synthetase [Methanosarcina acetivorans C2A]
Length = 712
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/445 (12%), Positives = 110/445 (24%), Gaps = 64/445 (14%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + D+ R LR E VT+V D I+ A
Sbjct: 16 TCGL-PYANGKAHIGHLRTYVPADIFARSLRKEGRE--VTFVCG----SDTHGTPIVVNA 68
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
+ + + + F + +L + + + ++ +I
Sbjct: 69 EE------LGITPKELVEIYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEK 122
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ Y EI + + T ++ + ++
Sbjct: 123 DYVYPKIIEIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHL----EPGELQN 178
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+ G H E G + + DL + A +
Sbjct: 179 PVCTICGGPAEYRHQEHFFFKLSEFGD-YLMDYLSNDLGGTTNARNYALGWVKQGLTDWC 237
Query: 263 -------NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW---PAPVIRLAML 312
+ + + G E + ++
Sbjct: 238 ITRNLEWGVRFPGHEDLVVYVWVDAPIGYIAFTEEWAAQAGDSWEKFWKGEGEIVHFIGG 297
Query: 313 MTHYREPIDFTVQRLTEAEILL-------------SKWPQTSTSKGIIDPAVLSALYNDL 359
Y I + + K+ +T + L ++
Sbjct: 298 DITYHHCIFWPAMLNGADYSVPTAVVASGMVKIEDKKFSKTRGYVVWVGEDYLDHGFHPD 357
Query: 360 NTVSAIQALHKLARESTKNHDLL--PIFNASAHILG--------------IEVCKEHLNK 403
+ + +E + +L I +LG EV + L
Sbjct: 358 LLRYYLASYTSHTKELNFSWRVLQEKINAELVAVLGNFLYRTMLFAFKNYGEVPEGKLEP 417
Query: 404 NISIAIEKLVQERLILLKMKKFSSA 428
+S IE+ ++E + +F A
Sbjct: 418 EVSAEIEEALKEVKEAMAEYEFKKA 442
>gi|15892969|ref|NP_360683.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
gi|25009381|sp|Q92GS6|SYM_RICCN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|15620165|gb|AAL03584.1| methionyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
Length = 508
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKKAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVRDEAFFDE 136
>gi|229587041|ref|YP_002845542.1| methionyl-tRNA synthetase [Rickettsia africae ESF-5]
gi|228022091|gb|ACP53799.1| Methionyl-tRNA synthetase [Rickettsia africae ESF-5]
Length = 508
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVRDEAFFDE 136
>gi|281413086|ref|YP_003347165.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
gi|281374189|gb|ADA67751.1| methionyl-tRNA synthetase [Thermotoga naphthophila RKU-10]
Length = 629
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R+ + V + +T D+ K+++ A+Q
Sbjct: 12 VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFF---LTGTDEHGQKVLQAAQQAGKDPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + K Q + + + H+ + + + +G Y+
Sbjct: 67 --EFCDELAEKFKQLWKEL---KITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ N + + + P K+ ++ F L K P+ +E
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEEHFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181
Query: 210 RGRPG 214
P
Sbjct: 182 FVEPD 186
>gi|322382808|ref|ZP_08056652.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
gi|321153277|gb|EFX45723.1| methionyl-tRNA synthetase-like protein [Paenibacillus larvae subsp.
larvae B-3650]
Length = 659
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 54/419 (12%), Positives = 104/419 (24%), Gaps = 84/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI--- 90
D HIG+A + D L R R + V +T D+ KI +A+++ +
Sbjct: 19 DKLHIGHAYTTVAGDALARYKRLRGYD-----VMYLTGTDEHGQKIERKAKEKGMTPQAF 73
Query: 91 -------------PINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLI 136
++ + + + + + L +
Sbjct: 74 VDNIVAGIKELWGKMDISYDDFIRTTEDRHKESVSVIFARLMEQGDIYLGEYEGWYCTSC 133
Query: 137 QNII-LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
++ + A + + F R ++ E P
Sbjct: 134 ESFFPENKLADGKCPDCGGPVEKMKEESYFFRMSKYADRLLQYYEENPDFIQPESRKNEM 193
Query: 196 RSTPMEPG------------WESPWGR-----------------GRPGWHIECSAMSSHY 226
+ ++PG W G+ + S+ Y
Sbjct: 194 INNFIKPGLEDLAVSRATFDWGVKVPNDPKHVIYVWIDALSNYISALGYGTKDSSKFDKY 253
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
D+H G ++I H +G+L ++ KMSKS GN +
Sbjct: 254 W--PADVHLVGKEIIRFHTIYWPIMLMAMG--LPLPKKVFGHGWLLMKDGKMSKSKGNVV 309
Query: 287 TINELLETKKFGGRSW-------PAPVIRLAMLMTHYREPIDFTVQR--------LTEAE 331
L++ + + R D + +
Sbjct: 310 DPVTLIDRYGLDALRYFLLREVPFGADGQFTPESFVERINHDLANDLGNLLNRTVVMMMK 369
Query: 332 ILLSKWPQTSTSKGIIDPAVLSAL----------YNDLNTVSAIQALHKLARESTKNHD 380
K D +L + +L A+ AL L + K D
Sbjct: 370 YFDGKLQVYVPGATEYDADLLKTMEGSISKYEEAMENLEFSVALSALWTLIGRANKYID 428
>gi|330994631|ref|ZP_08318554.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
gi|329758272|gb|EGG74793.1| Methionyl-tRNA synthetase [Gluconacetobacter sp. SXCC-1]
Length = 512
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 46/321 (14%), Positives = 83/321 (25%), Gaps = 63/321 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A + DV+ R R + V ++ TD + E +
Sbjct: 14 VNGAPHIGHAYTSVAADVIARFKRLAGFD--VFFLTG-TD-----EHGQKVEQAAQAAGM 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
+ F +A H+ L + + +GH Y E
Sbjct: 66 TPIAFADRVAADFRDMYDTMAISYDDFIRTTEPRHVQGAQALWKKLEENGHIYLDAYEGW 125
Query: 154 FDTSSIPNYGS--------------------------------FSRRKIDEQKMGTRVPE 181
+ T YG ++ E
Sbjct: 126 YATRDECFYGEEELIDGPDGKKVAPTGAAVEWVKEPSYFFDLSRFGDRLLELYETRPGFI 185
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH-------------------IECSAM 222
+ + K+ + + G P +
Sbjct: 186 EPASRRNEVISFVKQGLRNLSVSRTSFSWGIPVPGDPKHVMYVWVDALANYLSAVGYPDA 245
Query: 223 SSHYLGK-VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ G ++H G D++ H A A + +G+ +EG+KMSKS
Sbjct: 246 GAARWGFWPANLHLVGKDILRFHAIYWPALLMAAG--LPLPDRVFSHGWWTIEGQKMSKS 303
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + +L+ +
Sbjct: 304 LGNVVDPRDLVTEFGLDPIRF 324
>gi|34581336|ref|ZP_00142816.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
gi|28262721|gb|EAA26225.1| methionyl-tRNA synthetase [Rickettsia sibirica 246]
Length = 508
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDIPHIGHAYTSVASDVIARFMRLRGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTEHRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVQDEAFFDE 136
>gi|284052455|ref|ZP_06382665.1| methionyl-tRNA synthetase [Arthrospira platensis str. Paraca]
gi|291571486|dbj|BAI93758.1| methionyl-tRNA synthetase [Arthrospira platensis NIES-39]
Length = 534
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 52/182 (28%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R E + IT D+ KI A + S
Sbjct: 20 VNDVPHIGSAYTTIAADAIARWKRLQGYEVLL-----ITGTDEHGQKIQRTAEEAGCSPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I S + + + T PR H + Q + + Y + +
Sbjct: 75 --VHCDRIVSSFESLWKLLEIQYDRFSRTTSPR---HEAIVREFFQRVWENEDIYLSQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + ++ + F L K +E +
Sbjct: 130 GWYCVSCEEFKEKRELIDEKYCPIHVNKEVEWRDEQNYFFRLSKYQKQLEALYHDHPDFI 189
Query: 212 RP 213
P
Sbjct: 190 GP 191
>gi|261402933|ref|YP_003247157.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
gi|261369926|gb|ACX72675.1| methionyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
Length = 655
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++Y+ L+ + V +V TD + I A +E S
Sbjct: 17 HLGHARSTYIPADIMYKYLKLRGED--VIHVGG-TDNHGV--PITLTAEKEGKS------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I K + +D L + HI + +G+ YE E +
Sbjct: 66 PEEIVEKYHNEIKEDLDLLNVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CPKCKKFLPDRYVEGIC 142
>gi|116754198|ref|YP_843316.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
gi|121694646|sp|A0B7K2|SYM_METTP RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|116665649|gb|ABK14676.1| methionyl-tRNA synthetase [Methanosaeta thermophila PT]
Length = 669
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 47/170 (27%), Gaps = 22/170 (12%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + D+ R LR + V ++ D I+ A
Sbjct: 11 TCGL-PYANGPAHIGHLRTYVPADIFVRALRRMGHD--VLFICG----SDAHGTPIVVNA 63
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIIL 141
S + + F + +NH + +++ ++
Sbjct: 64 ESRGMS------PRELVEFYHKHFEDVFRSINVRFDYFGCTDDPSNH-HRTQEIVRALME 116
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
GH Y E+ + I ++ +
Sbjct: 117 RGHVYPKEIELAYCPRCERFLPDRYVEGICPYCGVPARGDECDQGCGRHL 166
>gi|15787607|gb|AAL06175.1| cysteinyl-tRNA synthetase [Helicobacter pylori]
Length = 40
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 6/44 (13%)
Query: 416 RLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
R K F AD IR++L + L D + T W++
Sbjct: 1 RNRAKDQKDFLKADSIREELLNHKIALMDT------PQGTIWEK 38
>gi|67458627|ref|YP_246251.1| methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
gi|75536907|sp|Q4UMX2|SYM_RICFE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|67004160|gb|AAY61086.1| Methionyl-tRNA synthetase [Rickettsia felis URRWXCal2]
Length = 512
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 33/180 (18%), Positives = 59/180 (32%), Gaps = 11/180 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFIRLCGFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T ++ F + + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDHTSESFRHLMNVMNISNDDFIRTTESRHKEAVAIFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ + + T P ++ K+ F L K + +E+ RP
Sbjct: 126 YAVRDEAFFDESELTS--DGLAPTGAPVEWVKEPSYFFNLSKWQDKLLEFYEANPDFIRP 183
>gi|312142731|ref|YP_003994177.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
gi|311903382|gb|ADQ13823.1| methionyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
Length = 652
Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 14/165 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R + + + +T D+ KI +A E
Sbjct: 17 DKLHIGHAYTTVAADTIARYKKMHGYDT-----MFLTGSDEHGQKIERKAAAEGKDTK-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + I + + + K + H + + + + G Y+ E
Sbjct: 70 EYVDEIVASFKELWKKLDIDY---DYFIRTTEERHEKVVQKIFKKLYDKGDIYKGKYEGW 126
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ T + + +K+ + + +K S
Sbjct: 127 YCTPCESFWSERQLEEEQGEKVCPD-CHRPVEWVEEQSYFFKMSK 170
>gi|170289510|ref|YP_001739748.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
gi|170177013|gb|ACB10065.1| methionyl-tRNA synthetase [Thermotoga sp. RQ2]
Length = 629
Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R+ + V + +T D+ K+++ A+Q
Sbjct: 12 VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFF---LTGTDEHGQKVLQAAQQAGKDPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + K Q + + + H+ + + + +G Y+
Sbjct: 67 --EFCDELAEKFKQLWKEL---KITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ N + + + P K+ ++ F L K P+ +E
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181
Query: 210 RGRPG 214
P
Sbjct: 182 FVEPD 186
>gi|148270780|ref|YP_001245240.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
gi|147736324|gb|ABQ47664.1| methionyl-tRNA synthetase [Thermotoga petrophila RKU-1]
Length = 629
Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 62/185 (33%), Gaps = 15/185 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R+ + V + +T D+ K+++ A+Q
Sbjct: 12 VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFF---LTGTDEHGQKVLQAAQQAGKDPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + K Q + + + H+ + + + +G Y+
Sbjct: 67 --EFCDELAEKFKQLWKEL---KITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ N + + + P K+ ++ F L K P+ +E
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKRPVKWVEEENYFFRLSKYRDPLLKYYEEHPD 181
Query: 210 RGRPG 214
P
Sbjct: 182 FVEPD 186
>gi|296284128|ref|ZP_06862126.1| methionyl-tRNA synthetase [Citromicrobium bathyomarinum JL354]
Length = 520
Score = 50.9 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 54/182 (29%), Gaps = 17/182 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A + DV+ R R + V + T D+ K+ +A ++ +
Sbjct: 18 PHIGHAYETVAADVIARFQRLKG--RDVRFQ---TGTDEHGLKMARKAEEQGKT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHG--HAYEANNEI 152
+ + + F RL H L + + +G +
Sbjct: 67 PRELADEMSGYFRDLFDRLNISYDRFIRTTEAGHHTASQALWRRMEANGDLYLDRYEGWY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + + E+ P ++ + F L K + + S +
Sbjct: 127 SVRDEAFYDEKELVEGEGGEKLSPQGTPVEWTVEESWFFRLSKYQDKLLDLYASQPDFIQ 186
Query: 213 PG 214
P
Sbjct: 187 PD 188
>gi|295694735|ref|YP_003587973.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
gi|295410337|gb|ADG04829.1| methionyl-tRNA synthetase [Bacillus tusciae DSM 2912]
Length = 684
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/212 (15%), Positives = 59/212 (27%), Gaps = 20/212 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI RAR+E +
Sbjct: 20 HIGHAYTTVAADAMARYKRLRGYD-----VMYLTGTDEHGQKIERRAREEGKTPQAFVD- 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I+ D + + T L++ ++ YE ++
Sbjct: 74 EIVGWIQELWRKLDISYDDFIRTTEPRHKKAVQRIFQRLMEQGDIYQADYEGLYCTPCES 133
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--------W 208
R + + + Y + R P + P
Sbjct: 134 FWTARQAEGGRCPDCGRPVELVREKSYFFRMSKYVPQLLRYYEENPEFIQPESRKHEMIN 193
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+PG C + ++ G G D
Sbjct: 194 NFIKPGLEDLCVSRTTFDWGIPVP---GDPDH 222
>gi|289523381|ref|ZP_06440235.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
gi|289503073|gb|EFD24237.1| methionine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC
BAA-1850]
Length = 646
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/168 (13%), Positives = 39/168 (23%), Gaps = 33/168 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-----------GEKCVTYVRNITDIDDKIIERA 83
V D HIG+A + DV+ R R + V V A
Sbjct: 16 VNDVPHIGHAYTTVAADVMARYKRMCGIDTLFATGTDEHGQKVQQV-------------A 62
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILH 142
++E + + + F K L HI + Y+ + ++
Sbjct: 63 QREGIT------PQELADRTVLNFKKLWEALNISCDDFVRTTEQRHIEVVQYIFKKLMDQ 116
Query: 143 GHAYE--ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G Y+ + K
Sbjct: 117 GDIYKGTYEGWYCVPCETYVPESQMGEGKTCPDCRRPLERMTEESYFF 164
>gi|30265080|ref|NP_847457.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47530586|ref|YP_021935.1| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49187891|ref|YP_031144.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|65317025|ref|ZP_00389984.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|165870881|ref|ZP_02215533.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167634931|ref|ZP_02393249.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167639976|ref|ZP_02398244.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170685894|ref|ZP_02877117.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707026|ref|ZP_02897483.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177652275|ref|ZP_02934778.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190567277|ref|ZP_03020192.1| putative methionyl-tRNA synthetase [Bacillus anthracis
Tsiankovskii-I]
gi|227817810|ref|YP_002817819.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
684]
gi|229602311|ref|YP_002869277.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
gi|254687371|ref|ZP_05151228.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254725384|ref|ZP_05187167.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
gi|254733720|ref|ZP_05191436.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254740558|ref|ZP_05198249.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
gi|254753180|ref|ZP_05205216.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|254761523|ref|ZP_05213544.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|68566041|sp|Q81XF9|SYM2_BACAN RecName: Full=Methionyl-tRNA synthetase 2; AltName:
Full=Methionine--tRNA ligase 2; Short=MetRS 2
gi|254782848|sp|C3P025|SYM_BACAA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|254782849|sp|C3LD96|SYM_BACAC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|30259757|gb|AAP28943.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47505734|gb|AAT34410.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames
Ancestor']
gi|49181818|gb|AAT57194.1| methionyl-tRNA synthetase, putative [Bacillus anthracis str.
Sterne]
gi|164713390|gb|EDR18915.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|167512057|gb|EDR87435.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529681|gb|EDR92430.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170128129|gb|EDS96999.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170670358|gb|EDT21098.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172082281|gb|EDT67347.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190561781|gb|EDV15751.1| putative methionyl-tRNA synthetase [Bacillus anthracis
Tsiankovskii-I]
gi|227006250|gb|ACP15993.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. CDC
684]
gi|229266719|gb|ACQ48356.1| putative methionyl-tRNA synthetase [Bacillus anthracis str. A0248]
Length = 544
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDCYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|312131388|ref|YP_003998728.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
gi|311907934|gb|ADQ18375.1| methionyl-tRNA synthetase [Leadbetterella byssophila DSM 17132]
Length = 681
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/166 (17%), Positives = 46/166 (27%), Gaps = 23/166 (13%)
Query: 28 MYVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERA 83
+Y GP HIG+ I DV R LR + V ++ TD + I +A
Sbjct: 10 IYANGP-----IHIGHLAGCYIPADVFVRYLRSKGED--VAFISG-TDEHGV--PITIKA 59
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
++E S + K + R T+ H + +
Sbjct: 60 KKEGVS------PQEVVDKYYKIIKDSFEDFGIS-FDIYSRTTSPVHHQTSQEFFRKMYD 112
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
G E E FD ++ +K
Sbjct: 113 KGFFDEIETEQYFDETAQQFLADRYIVGECPVCHSPGAYGDQCEKC 158
>gi|219123327|ref|XP_002181978.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406579|gb|EEC46518.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 574
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 52/374 (13%), Positives = 96/374 (25%), Gaps = 81/374 (21%)
Query: 15 ITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
FQ P +Y V D HIG+A DV+ R +R + V ++ TD
Sbjct: 59 KRPFQITTP----IYY----VNDKPHIGHAYTSTACDVIARFMRLSG--RDVFFLSG-TD 107
Query: 75 IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMI 133
+ E + N + + F + + + +H +
Sbjct: 108 -----EHGEKVEQSAEKQNMDPQGFVDQVSVNFRELLELMNISNDKFIRTTSEDHKKSVQ 162
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGS----------------------------F 165
+ ++ G+ Y + Y
Sbjct: 163 HFWNVMVEKGYIYMGTYSGWYSVRDECFYTESELIDGKAPTGAEVSWVAKEESYFFKLSQ 222
Query: 166 SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS-- 223
K+ + + K + + G P E M
Sbjct: 223 FEEKLLDLYERNPHFIAPESRKNEVVSFVKGGLRDLSISRTSFKWGVPVPDDEDHVMYVW 282
Query: 224 ----------------------SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
S + IH G D++ H A A
Sbjct: 283 VDALTNYISALGYPDMGEGSDFSKFW--PASIHIVGKDILRFHAVYWPAMLMAA--ELPL 338
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPI 320
+G+ +G+K+SKS GN I EL+ + R ++ ++
Sbjct: 339 PKRLFAHGWWTKDGQKISKSIGNVIDPVELV-------NKYGVDQTRFFLMSEVNFGNDG 391
Query: 321 DFTVQRLTEAEILL 334
DF+ + + +
Sbjct: 392 DFSDRAMIQKCNTN 405
>gi|87199956|ref|YP_497213.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
gi|87135637|gb|ABD26379.1| methionyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
Length = 521
Score = 50.9 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/179 (15%), Positives = 58/179 (32%), Gaps = 11/179 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I DV+ R R + V + T D+ K+ ++AR+ + +
Sbjct: 18 PHIGHAYEAIAADVIARFQRAMG--RDVRFQ---TGTDEHGLKMAQKARELGITP--REL 70
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++S + + T + R ++ ++ +
Sbjct: 71 SDEMSSYFIKMCDELNVSYDVFIRTTEERHHASTQELWRRMEANGDL-YLDRYEGWYSVR 129
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ + + E+ P + + F L K + P+ +E G +P
Sbjct: 130 DEAFYDESELVAGEGGEKLSPQGTPVDWTVEESWFFRLSKYAEPLLKLYEENPGFIQPD 188
>gi|296535550|ref|ZP_06897732.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
gi|296264136|gb|EFH10579.1| methionine--tRNA ligase [Roseomonas cervicalis ATCC 49957]
Length = 522
Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 47/318 (14%), Positives = 82/318 (25%), Gaps = 58/318 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP--- 88
V D HIG+A + DVL R R + V + +T D+ K+ + A
Sbjct: 16 VNDKPHIGHAYTSLAADVLARWKRMMGHQ--VHF---LTGTDEHGQKVEKAAEARGMAPQ 70
Query: 89 --SIPINDAISIITSKNT---------------------QQFVKDTTRLACLAPTHQPRA 125
+ ++ A + + + +++ +
Sbjct: 71 DFTDQVSQAFRDLAVRMNYSNDDFIRTTEERHKLACAALWKRLEERGEIHLGHYEGWYAV 130
Query: 126 TNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK 185
+ I A S S + K+ E
Sbjct: 131 RDEAFYGPDEITEKDGQKFAPTGAPVEWVREPSYFFRLSNWQEKLLEFYEANPDFIAPAS 190
Query: 186 KNPADFILWK-------------RSTPMEPG--------WESPWGRGRPGWHIECSAMSS 224
+ K + PG W + ++
Sbjct: 191 RRNEVISFVKSGLTDLSISRTSFKWGVKVPGDEAHVMYVWLDALTNYITALGYPDESAAN 250
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H A A T +G+ EG+K+SKS GN
Sbjct: 251 WSFW-PADVHFVGKDILRFHAIYWPAFLMAAG--LPTPRRVFAHGWWTNEGQKISKSLGN 307
Query: 285 FITINELLETKKFGGRSW 302
I L+E +
Sbjct: 308 VIDPLALIEEFGLDPVRY 325
>gi|289192151|ref|YP_003458092.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
gi|288938601|gb|ADC69356.1| methionyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
Length = 650
Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 44/137 (32%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++Y+ L+ + V +V TD + I A +E S
Sbjct: 17 HLGHARSTYIPADIMYKYLKLKGED--VIHVGG-TDNHGV--PITLTAEKEGKS------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I K + +D L + HI + +G+ YE E +
Sbjct: 66 PEEIVEKYHNEIKEDLDLLGIEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CPKCKKFLPDRYVEGIC 142
>gi|228917671|ref|ZP_04081212.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228841908|gb|EEM87014.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 245
Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQKVFLRLLEEEHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T ++ + +L K+
Sbjct: 125 CETCMQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|118474589|ref|YP_891971.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
gi|118413815|gb|ABK82235.1| methionyl-tRNA synthetase [Campylobacter fetus subsp. fetus 82-40]
Length = 632
Score = 50.5 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 48/182 (26%), Gaps = 15/182 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D + R R + +T D+ KI E A+
Sbjct: 12 VNDVPHIGHAYTTIIADTMARYYRLVGYDTFF-----LTGTDEHGQKIEEAAKA------ 60
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + +F H R T+ + + ++ E
Sbjct: 61 HCKTPKEYADEVSAKFRSLWDEFEIS-YDHFIRTTDDYHKFTAQNVFLKMYEKGDIYKGE 119
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + ID++ + K + F W
Sbjct: 120 YEGNYCVSCETFFPQNQLIDDEFCPDCGKKTRIVKEESYFFKLSDYQDKLLKWYEKGNCI 179
Query: 212 RP 213
P
Sbjct: 180 LP 181
>gi|312880384|ref|ZP_07740184.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783675|gb|EFQ24073.1| methionyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 648
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 51/336 (15%), Positives = 86/336 (25%), Gaps = 79/336 (23%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I DVL R R T+ +T D+ KI + A + +
Sbjct: 17 VNDVPHIGHAYTTIAADVLARHHRMLG--DPTTF---LTGTDEHGQKIQQAAAAKGLTAL 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + + F + L H + ++ ++ G Y
Sbjct: 72 ------QLADQTVENFRRLWKVLNITNDDFIRTTEPRHEKVVQHIFSTLLEKGDIYLGSY 125
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES-- 206
+ + K P+ +E
Sbjct: 126 EGWYCVPCETYVPEAQMGEGNTCPDCGRPLQKMTEQSYFFR---MSKYEQPLLDYYEGLP 182
Query: 207 ------------------------------PWGRGRPGWHIECSAM-------------- 222
WG PG +
Sbjct: 183 EAILPRTRANEILSFLRGGLKDQSISRTTMKWGVPVPGDEQHVVYVWFDALINYLSALGY 242
Query: 223 --SSHYLGKVFDI--HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+ + + H G D+I H A ++ ++ H + +EG KM
Sbjct: 243 PEAGKPWETFWPVAHHLVGKDIIRFHSVVWPALLLAL-GLQPPKRVFAHG-WWTVEGDKM 300
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
SKS GN + E+ E + V R +L
Sbjct: 301 SKSKGNVVDPFEMAER-------YGVDVFRYFLLRE 329
>gi|303244973|ref|ZP_07331297.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
gi|302484684|gb|EFL47624.1| methionyl-tRNA synthetase [Methanothermococcus okinawensis IH1]
Length = 691
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/137 (19%), Positives = 47/137 (34%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++ R L+ +K V +V TD + I A +E
Sbjct: 19 HLGHARSTYIPADIMRRYLKL--NKKDVIHVGG-TDNHGV--PITITAEKEGVK------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I +K + +D L ++ ++ HI + +G+ YE E +
Sbjct: 68 PEDIVNKYHNEIKRDLDNLNIEFDSYGKTHSDIHIKTAQEFYLKLKENGYIYEKEIEQFY 127
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 128 CPKCNRFLADRYVEGIC 144
>gi|169830260|ref|YP_001716242.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
gi|169637104|gb|ACA58610.1| methionyl-tRNA synthetase [Candidatus Desulforudis audaxviator
MP104C]
Length = 516
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 60/423 (14%), Positives = 118/423 (27%), Gaps = 87/423 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI A +
Sbjct: 19 DNLHIGHAYTTVAADTVARFKRLTGYD--VYF---LTGSDEHGQKIERTAAARGKNPQ-- 71
Query: 94 DAISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH------ 144
+ + I + + + + D + R I + ++ +I +
Sbjct: 72 EYVDEIVAGFKRLWSRLEIDYSDFIRTTEDRHKRVVTDIFRRLHEQGDIYKSSYEGLYCT 131
Query: 145 ---AYEANNEI----IFDT---------SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
A+ + ++ D S S ++ + +
Sbjct: 132 PCEAFWTDRQVVEGNCPDCGRPVELVAEESYFFRQSRYAERLLAHIDRNPDFIQPVSRRN 191
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K + + G P + E ++
Sbjct: 192 EVVSFIKMGLEDLCVSRTTFNWGIPVPFDPRHVIYVWVDALTNYISALNYGAEDDSLYRR 251
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G D++ H A + +G+L LE KMSKS GN
Sbjct: 252 YW--PVDVHLVGKDIVRFHCIIWPIILMAAG--IPLPKRVVGHGWLMLESGKMSKSKGNV 307
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHY-------REPID----------------- 321
+ L++ + L +Y R +D
Sbjct: 308 VDPFVLIDRYGVDAIRYYLLREMLFGADGYYSEDNLIRRINVDLANDLGNLLSRTTAMID 367
Query: 322 -FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ + + +I P ++ L N+L+ +A+ A+ KL + K +
Sbjct: 368 KYLDGEIQAPGPADDPLDRELIDLALITPGEVAGLVNELDLSAALGAIMKLVGRANKYIE 427
Query: 381 LLP 383
Sbjct: 428 ETA 430
>gi|163868324|ref|YP_001609533.1| methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
gi|161017980|emb|CAK01538.1| Methionyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
Length = 519
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 46/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I DVL R R K V ++ TD + + + ++
Sbjct: 16 GHPHIGHAYSAIASDVLARFQRLNG--KKVFFLSG-TD-----EHGLKMQQTAAALDMTP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K L C H + + + +G Y +
Sbjct: 68 QQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEENGDIYLGRYTGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + + + N + ++
Sbjct: 128 VRQEAYYEEKDTEVGPDNIRREKELGSPVEWNEEESYFFR 167
>gi|294494856|ref|YP_003541349.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
gi|292665855|gb|ADE35704.1| methionyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
Length = 680
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 25/182 (13%)
Query: 18 FQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
F P + CG Y AHIG+ R I D+ R L+ E VT+V
Sbjct: 4 FSPDKPILV---TCGL-PYANGMAHIGHLRTYIPADIFVRSLKKMGHE--VTFVCG---- 53
Query: 76 DD----KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHI 129
D I+ A ++ N + K F + + TNH
Sbjct: 54 SDTHGTPIVFNAEEQ------NTTPQALIKKYHSHFDETFKSMGIEFDAFGTTDDPTNH- 106
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ ++ +I + + Y EI + + ++ +
Sbjct: 107 NRTHDIVNRLIENDYVYPKTIEIAYCAGCNRFLPDRYVEGECPHCAESARGDECDQGCGK 166
Query: 190 DF 191
Sbjct: 167 HL 168
>gi|301598374|pdb|2X1L|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
Methionyl-Trna Synthetase In Complex With Methionine And
Adenosine
gi|301598375|pdb|2X1L|B Chain B, Crystal Structure Of Mycobacterium Smegmatis
Methionyl-Trna Synthetase In Complex With Methionine And
Adenosine
gi|301598376|pdb|2X1L|C Chain C, Crystal Structure Of Mycobacterium Smegmatis
Methionyl-Trna Synthetase In Complex With Methionine And
Adenosine
gi|301598377|pdb|2X1M|A Chain A, Crystal Structure Of Mycobacterium Smegmatis
Methionyl-Trna Synthetase In Complex With Methionine
Length = 524
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 47/159 (29%), Gaps = 11/159 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPINDAIS 97
HIG+A I D + R R + V Y+ TD+ K+ E A +E +
Sbjct: 27 PHIGHAYEYIATDAIARFKRLDGYD--VRYLTG-TDVHGQKMAETAAKEGI------PAA 77
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +N+ F + +L + +H + + + G Y + +
Sbjct: 78 ELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGWYSI 137
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + + ++
Sbjct: 138 RDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFR 176
>gi|150401049|ref|YP_001324815.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
gi|187647735|sp|A6UUN1|SYM_META3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|150013752|gb|ABR56203.1| methionyl-tRNA synthetase [Methanococcus aeolicus Nankai-3]
Length = 672
Score = 50.5 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 16/132 (12%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++ R L+ + V +V TD + I A +E
Sbjct: 19 HLGHARSTYIPADIIKRYLKLKGND--VIHVGG-TDNHGV--PITLTAEKEGVK------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I +K + +D L+ ++ ++ HI + + +G+ YE E +
Sbjct: 68 PEDIVNKYHNEIKRDLDNLSVEFDSYGKTHSDTHIQNAQEFYKKLKENGYIYEKEIEQFY 127
Query: 155 DTSSIPNYGSFS 166
Sbjct: 128 CPDCDKFLADRY 139
>gi|118469128|ref|YP_889680.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
gi|118170415|gb|ABK71311.1| methionyl-tRNA synthetase [Mycobacterium smegmatis str. MC2 155]
Length = 515
Score = 50.5 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/159 (13%), Positives = 47/159 (29%), Gaps = 11/159 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPINDAIS 97
HIG+A I D + R R + V Y+ TD+ K+ E A +E +
Sbjct: 18 PHIGHAYEYIATDAIARFKRLDGYD--VRYLTG-TDVHGQKMAETAAKEGI------PAA 68
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +N+ F + +L + +H + + + G Y + +
Sbjct: 69 ELARRNSDVFQRLQEKLNISFDRFIRTSDADHYEASKAIWKRMADAGDIYLDAYKGWYSI 128
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + + ++
Sbjct: 129 RDERFFTENETTEQPDGTRIATETGAPVTWTEEQTYFFR 167
>gi|283954409|ref|ZP_06371929.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
gi|283794026|gb|EFC32775.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
Length = 625
Score = 50.5 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 43/333 (12%), Positives = 89/333 (26%), Gaps = 72/333 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY----------------VRNITDID-- 76
V D H+G+A I+ D L R R E + +RN T +
Sbjct: 11 VNDMPHLGHAYTTIIADTLARFYRLQGHET--RFLTGTDEHGQKIEEAAKLRNFTPQEYA 68
Query: 77 DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH-------QPRATNHI 129
DKI + + + I ++ T + + L + +
Sbjct: 69 DKI---SSEFKKLWDEFEITYDIYARTTDIRHIEFVKAMFLKMWQKGDIYKDEYEGHYCV 125
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR----------- 178
+ Q+ +++ ++ + + S+ + +
Sbjct: 126 SCESFFTQSQLINEYSCPDCGKQTRILKEESYFFKLSKYQDKILQWYQEKDPILPKNKKN 185
Query: 179 --------------VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+ + W +C ++
Sbjct: 186 ELVNFVQNGLKDLSITRTSFDWGIKLPQEINDDKHIVYVWLDALFIYVSSLDFQCKGENA 245
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKS 281
+ +H G D++ H A A + +G+ EG KMSKS
Sbjct: 246 KFW--PAHVHLVGKDILRFH-----AIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
GN + E+++ + + R +L
Sbjct: 299 KGNVVKPKEMVDA-------YGSEAFRYFLLRE 324
>gi|298492950|ref|YP_003723127.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298234868|gb|ADI66004.1| methionyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 533
Score = 50.5 bits (119), Expect = 7e-04, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 57/182 (31%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DV+ R R + V V T D+ KI A P
Sbjct: 20 VNDVPHIGSAYTTMAADVVARFQRSLGHQ--VLLV---TGTDEHGQKIQRSAA--SLEKP 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + A NH + Q + +G Y+ +
Sbjct: 73 PQEFCDQIVPSFINLWEVLNIQY---DRFSRTTALNHYAIVKEFFQRVWENGDIYQGQQK 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + T ++ + F L K T +E ++S
Sbjct: 130 GWYCVSCEEFKEERELLDGKRCPIHTSKEVEWRDEQNYFFRLSKYQTKLEEFYQSSPDFI 189
Query: 212 RP 213
+P
Sbjct: 190 QP 191
>gi|258510147|ref|YP_003183581.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
gi|257476873|gb|ACV57192.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius subsp.
acidocaldarius DSM 446]
Length = 650
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 61/426 (14%), Positives = 104/426 (24%), Gaps = 96/426 (22%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI +RA Q
Sbjct: 16 DKLHIGHAYTTVAADAIARYKRLRGYD--VFF---LTGTDEHGLKIQQRAEQAGLE---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+L H + + + ++ G Y + +
Sbjct: 67 --PKAFLDPIIAWIQDLWKKLDISYDDFIRTTEARHERVVEQIFERLLQQGDIYLSEYQG 124
Query: 153 IFDTSSIPNYGSFS----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ T + + +++ E Y + + PG+ P
Sbjct: 125 WYCTPCESYWAERELVDGKCPQCGREVQFVREESYFFRMSKYVDRLLQYYEENPGFIEPV 184
Query: 209 G--------RGRPGWHIECSAMSSHYLGKVFD---------------------------- 232
PG C + +S G
Sbjct: 185 SRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAIGYLSDDA 244
Query: 233 -------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
+H G D++ H +GF ++G KMS
Sbjct: 245 DERVKFERYWPADVHVVGKDIVRFHAVYWPIILMALG--LPLPKKVFGHGFFLVKGGKMS 302
Query: 280 KSNGNFITINELLETKKFGGRSW----------------PAPVIRL-------AMLMTHY 316
KS GN I L++ + V RL + H
Sbjct: 303 KSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFGNLVHR 362
Query: 317 REPI--DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARE 374
+ F + L + V + L A+ L L R
Sbjct: 363 TAAMLNRFNDGVVPAPGSLTDVDRALRDLAAEVKAKVEENMDQ-LQFSVALAELWNLVRA 421
Query: 375 STKNHD 380
+ K D
Sbjct: 422 ANKYID 427
>gi|157826102|ref|YP_001493822.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
gi|157800060|gb|ABV75314.1| methionyl-tRNA synthetase [Rickettsia akari str. Hartford]
Length = 512
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V ++ TD + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFMRLRGLD--VIFLTG-TD-----EHGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F + N H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMAVMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ +
Sbjct: 126 YAVRDEAFFDE 136
>gi|240850631|ref|YP_002972031.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
gi|240267754|gb|ACS51342.1| methionyl-tRNA synthetase [Bartonella grahamii as4aup]
Length = 519
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 45/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I DVL R R K V ++ TD + + + +
Sbjct: 16 GAPHIGHAYSAIASDVLARFQRLNG--KNVFFLSG-TD-----EHGLKMQQTAAALGMTP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K L C H + + + +G Y +
Sbjct: 68 QQLADRNSAVFQKMLAVLNCSNDDFIRTTEERHYQACQEIWKKMEANGDIYLGRYTGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + + + N + ++
Sbjct: 128 VRQEAYYEEKDTEIGPDNIRREKELGSPVEWNEEESYFFR 167
>gi|307151236|ref|YP_003886620.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
gi|306981464|gb|ADN13345.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7822]
Length = 533
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R R V IT D+ KI A + +
Sbjct: 20 VNDVPHIGSAYTTMIADVIARWKRLQGYS-----VMFITGTDEHGQKIQRTAEAKGLAPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + K + T H + Q + G Y
Sbjct: 75 --EHCDQIVTSFESLWDKLNIHYDRFSRTTAKP---HQSIVKEFFQRVWDQGDIYLDQQI 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + ++ T + ++ + F L K + +
Sbjct: 130 GWYCVACEEFKEERELTENGSCQIHTNLKAEWRDEENYFFRLSKYQQKLAEFYAEKPEFI 189
Query: 212 RP 213
RP
Sbjct: 190 RP 191
>gi|90417681|ref|ZP_01225593.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
gi|90337353|gb|EAS51004.1| methionyl-tRNA synthetase [Aurantimonas manganoxydans SI85-9A1]
Length = 515
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 52/163 (31%), Gaps = 16/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R + V + +T D+ K+++ AR++ S
Sbjct: 16 GRPHIGHAYEFIATDALARFKRLDGYD--VFF---LTGTDEHGIKMLQSAREQGIS---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +N+ +F L + H+ + + G Y+
Sbjct: 67 --PAELARRNSAEFEAMAALLGGTNDDFIRTSEDRHVAASQAIWTKMAAAGDVYKDAYSG 124
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ YG ++ E + + +K
Sbjct: 125 WYSVRDEAYYGEDE-TELREDGKRYGPQGSPVEWVAEESYFFK 166
>gi|228948767|ref|ZP_04111044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
gi|228810899|gb|EEM57243.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
monterrey BGSC 4AJ1]
Length = 544
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|311897996|dbj|BAJ30404.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 534
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/148 (15%), Positives = 47/148 (31%), Gaps = 14/148 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 22 VNDRPHLGHAYTTVAGDVLTRWHRQRGED--VWY---LTGTDEHGQKILRTAEANGVTPQ 76
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + + + + + H ++ +Q++ G Y+
Sbjct: 77 --EWCDKLVGEAWKPLWEHLRIAN--DDFIRTTEARHTDRVQEFVQDLYDKGEIYQGSYT 132
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
G +++K+
Sbjct: 133 GPYCVGCEEYKLPGELLPGTTEDEKLCP 160
>gi|228923768|ref|ZP_04087046.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228835897|gb|EEM81260.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 544
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L TH +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFHDLGFTYDCYTHTASEHHHETVQNVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|83311547|ref|YP_421811.1| methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
gi|82946388|dbj|BAE51252.1| Methionyl-tRNA synthetase [Magnetospirillum magneticum AMB-1]
Length = 516
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 48/181 (26%), Gaps = 12/181 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + E +
Sbjct: 16 VNDKPHIGHAYTTLACDVLARFKRLDGFD--VKFLTG-TD-----EHGQKVEKSAEAFGV 67
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EANNE 151
+ +N+ F + L C H L ++ G Y
Sbjct: 68 TPQALADQNSANFRELAKILGCTNDDFIRTTEARHKAACQALWDKLVAKGDIYLGAYEGW 127
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + T P ++ K+ F L W
Sbjct: 128 YSVRDEAFYAEDELVKGADGAKLAPTGAPVEWVKEPSYFFRLS-AWQDRLLRWYEDNPDC 186
Query: 212 R 212
Sbjct: 187 V 187
>gi|162147584|ref|YP_001602045.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|209542217|ref|YP_002274446.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|161786161|emb|CAP55743.1| Methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
gi|209529894|gb|ACI49831.1| methionyl-tRNA synthetase [Gluconacetobacter diazotrophicus PAl 5]
Length = 512
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/139 (16%), Positives = 39/139 (28%), Gaps = 9/139 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A + D++ R R + V ++ TD + E +
Sbjct: 14 VNGAPHIGHAYTSVAADIVARFKRLAGFD--VFFLTG-TD-----EHGQKVEQAAQAAGL 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
A + + F + HI L + I +GH Y E
Sbjct: 66 APIAFADRVSADFRAMYDVMNVSYDDFIRTTEPRHIAGATALWERIAANGHIYLGAYEGW 125
Query: 154 FDTSSIPNYGSFSRRKIDE 172
+ Y +
Sbjct: 126 YALRDESFYNEDELVTQPD 144
>gi|58038507|ref|YP_190471.1| methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
gi|58000921|gb|AAW59815.1| Methionyl-tRNA synthetase [Gluconobacter oxydans 621H]
Length = 516
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/139 (18%), Positives = 43/139 (30%), Gaps = 9/139 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A I DVL R + + V +V TD + E ++
Sbjct: 19 VNGAPHIGHAYTSIAADVLARF--HRLNGEEVLFVSG-TD-----EHGQKVEQTAVAKGM 70
Query: 95 AISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + F + +A + H L + + +GH Y E
Sbjct: 71 DPQAYADEVSASFRQMQKDMAISTDEFIRTTEERHKGAAKALWEKVAANGHIYLGAYEGW 130
Query: 154 FDTSSIPNYGSFSRRKIDE 172
+ T G K +
Sbjct: 131 YSTRDEAFIGEDELVKKPD 149
>gi|15604526|ref|NP_221044.1| methionyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
gi|6226189|sp|Q9ZCP0|SYM_RICPR RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|3861220|emb|CAA15120.1| METHIONYL-TRNA SYNTHETASE (metS) [Rickettsia prowazekii]
gi|292572314|gb|ADE30229.1| Methionyl-tRNA synthetase [Rickettsia prowazekii Rp22]
Length = 508
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 46/131 (35%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D AHIG+A + DV+ R +R+ K V ++ TD + E +I N
Sbjct: 14 VNDVAHIGHAYTSVASDVIARFMRFCG--KDVMFLTG-TD-----EHGQKVEKAAINQNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
T K +Q F + N H + + ++ +G YE E
Sbjct: 66 DPQTFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWKKLLDNGAIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YSVRDEAFYDE 136
>gi|307353949|ref|YP_003895000.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307157182|gb|ADN36562.1| methionyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 669
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 23/172 (13%), Positives = 45/172 (26%), Gaps = 26/172 (15%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEH 87
CG Y HIG+ R + D R LR+ E V ++ H
Sbjct: 9 TCGL-PYTNGPCHIGHLRTYVPADFYVRFLRHCGEE--VVFICG------------SDNH 53
Query: 88 ------PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNI 139
S + I + F + ++ + NH + ++ ++
Sbjct: 54 GTPVVISSEAEGISPREICERYHTHFYETFRKMEVIFDRFGMTDDPANH-KRTRSIVTDL 112
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
I +G+ YE + ++ +
Sbjct: 113 INNGYIYEKTVSQCYCPHCEMFLPDRYVEGTCPHCGEKARGDECDQGCGKHL 164
>gi|294083928|ref|YP_003550685.1| methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
marinum IMCC1322]
gi|292663500|gb|ADE38601.1| Methionyl-tRNA synthetase, class Ia [Candidatus Puniceispirillum
marinum IMCC1322]
Length = 516
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 59/413 (14%), Positives = 108/413 (26%), Gaps = 62/413 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DV+ R R E V + +T D+ K+ + A+ S
Sbjct: 15 VNDKPHIGHAYTTLACDVMARFKRLDGFE--VKF---LTGTDEHGQKVEKAAQVAGTSPQ 69
Query: 92 IN-----DAISIITS----------KNTQQFVK--DTTRLACLAPTHQPRATNHIPQMIY 134
+T+ + T++ K L R +
Sbjct: 70 EFTNAVSQNFRDLTTQLNFSNDDFIRTTEERHKLACQQLWRILLDKGYIRLDTYAGWYAV 129
Query: 135 LIQNIILHG-----HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ A + S S + K+ +
Sbjct: 130 RDEAFYTKDEIVDGKAPSGAPVEWVEEPSYFFDLSKFQDKLLAFYEANPDFVAPASRFNE 189
Query: 190 DFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHY 226
K + + G P GW ++ + ++
Sbjct: 190 VKSFVKGGLRDLSVSRASFKWGVPVPDDDAHVMYVWLDALTNYITATGWPVDGAFGNAET 249
Query: 227 LGKVFD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
K++ +H G D++ H A AD +G+ EG+K+SKS GN
Sbjct: 250 YEKLWPADLHMVGKDILRFHAVYWPAFLMAAD--LPLPKRVFAHGWWTNEGQKISKSLGN 307
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID---FTVQRLTEAEILLSKW--PQ 339
I L E + + + L +
Sbjct: 308 VIDPVALSEIYGLDQTRYFLMREVPFGKDGDFSVQAMIQRMNSDLANDLGNLSQRVISMI 367
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
+G++ +S D ++A AL R + ++
Sbjct: 368 FKNCEGVMPALPVSPSPEDNAILTACDALLDQVRIHIDQQSFHEALRSIWDVI 420
>gi|228930066|ref|ZP_04093076.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228829565|gb|EEM75192.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|317050747|ref|YP_004111863.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316945831|gb|ADU65307.1| methionyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 629
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 31/182 (17%), Positives = 53/182 (29%), Gaps = 20/182 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DV R R + V +T D+ KI + AR+
Sbjct: 14 VNDVPHIGHAYTTVACDVAARFQRLMGRD-----VMFLTGTDEHGMKIEQAARKNG---- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
+ + ++ ++F + T L H + L + + G Y E
Sbjct: 65 --ETPIELANRVVKRFQELWTTLDISHDDFIRTTEKRHEMGVHKLFRQLREQGDIYLGEY 122
Query: 149 NNEIIFDTSSI---PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
S G + + + Y + PG+
Sbjct: 123 EGWYCTPCESFWTETQVGEAINCPDCGRSVDKLKEKSYFFRMSKYAEPLLEHIKTNPGFI 182
Query: 206 SP 207
P
Sbjct: 183 QP 184
>gi|170079299|ref|YP_001735937.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|169886968|gb|ACB00682.1| methionyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 530
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/184 (16%), Positives = 55/184 (29%), Gaps = 15/184 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A +V D + R + V + IT D+ KI A+++
Sbjct: 16 VNDVPHIGSAYTTMVADAIARF--HRLKGDDVLF---ITGTDEHGQKIQRTAQEKGVDPQ 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
++ + F NH + Q + +G Y A
Sbjct: 71 VH------CDEIIGSFKDLWQHYNIQYDRFSRTTAPNHAKIVAEFFQRVWDNGDIYLAQQ 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + + K + T ++ + F L K +E +
Sbjct: 125 QGWYCVACEEFKEEKDLIKDHHCAIHTNKQAEWRDEENYFFRLSKYQAQLEALYSDNPDF 184
Query: 211 GRPG 214
+P
Sbjct: 185 IQPA 188
>gi|196033059|ref|ZP_03100472.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
gi|218906235|ref|YP_002454069.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
gi|226695272|sp|B7JEJ3|SYM_BACC0 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|195994488|gb|EDX58443.1| putative methionyl-tRNA synthetase [Bacillus cereus W]
gi|218535969|gb|ACK88367.1| putative methionyl-tRNA synthetase [Bacillus cereus AH820]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|227824451|ref|ZP_03989283.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
gi|226904950|gb|EEH90868.1| methionyl-tRNA synthetase [Acidaminococcus sp. D21]
Length = 644
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 60/460 (13%), Positives = 122/460 (26%), Gaps = 90/460 (19%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A + D + R R + V +V T D+ KI +A + +
Sbjct: 20 HIGHAYCSTIADTIARYKRANGFD--VRFV---TGSDEHGLKIQRKAEENGMTPLQYVDG 74
Query: 96 --------ISIITSKNTQQFVKDTTRLACLAPTHQPRA--------TNHIPQMIYLIQNI 139
++ T + + R ++ + ++
Sbjct: 75 IVANFKKLWEMLGISYTDFVRSSSAEHERVVQEILQRVYDKGDIYKKKYVGKYCVPCESF 134
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRR---------KIDEQKMGTRVPEKYHKKNPAD 190
E + D +I + + +
Sbjct: 135 WTDRQ-IEEAGGVCPDCGRPVETMEEEDYFFRMSKYADQILKHIENHPDFIQPVSRRNEM 193
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWH------------IECSAMSSHYLGK--------V 230
K+ S + G P + C +L
Sbjct: 194 IAFLKQGLEDLCISRSTFDWGIPVPFDKKQITYVWFDALLCYFTGIGFLRNEEEFNRFWP 253
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
D+H G +++ H A +G+L + G KMSKS GN + E
Sbjct: 254 VDLHLVGKEIVRFHTIIWPAMLLSMGYELP--KKVYGHGWLVVNGDKMSKSKGNVVDPVE 311
Query: 291 LLETKKFGGRSWPAPVIRLAMLM--------THYREPIDFTVQRLTEAEILLSKWPQTST 342
+ + +R +L + RE + ++ ++ S
Sbjct: 312 -------PIKEFGPDAVRYFLLSEIALGNDGNYSREGLIRRWNTDLANDLGNLQYRTVSM 364
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHK----LARESTKNHDLLPIFNASAHILG----- 393
++ +D A AL + R++ + + A +G
Sbjct: 365 I-EKYHQGIVHKTASDHADDKAFAALAEETLGSYRKAMDEYQINDALKAVWSYIGAANKY 423
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRK 433
I+V + ++RL + ++ AD +R
Sbjct: 424 IDVTTPWILAKDPAQ-----KDRLEAVM---YNLADAVRN 455
>gi|91205053|ref|YP_537408.1| methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
gi|123388147|sp|Q1RJZ5|SYM_RICBR RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|91068597|gb|ABE04319.1| Methionyl-tRNA synthetase [Rickettsia bellii RML369-C]
Length = 509
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R E V +T D+ + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFMRLSGHE-----VMFLTGTDE---HGQKVEKAAIDKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + +Q F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|301056527|ref|YP_003794738.1| methionine--tRNA ligase [Bacillus anthracis CI]
gi|300378696|gb|ADK07600.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|228936320|ref|ZP_04099118.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228823152|gb|EEM68986.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|229094153|ref|ZP_04225233.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
gi|228689256|gb|EEL43077.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-42]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|229124576|ref|ZP_04253761.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
gi|228658916|gb|EEL14571.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 95/8201]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|158604929|gb|ABW74748.1| methionyl-tRNA synthetase [Campylobacter concisus 13826]
Length = 644
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 53/182 (29%), Gaps = 17/182 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R R E TY T D+ KI + AR +
Sbjct: 14 VNDVPHIGHAYTTIIADTLARFNRLQGKE---TYFM--TGTDEHGQKIEQAARARGKT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ + +F H + + + + ++G Y+
Sbjct: 67 ----PKEYADEISAKFRSLWDEFEISYDHFIRTTDEEHKQTVQNVFEKMQVNGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + S + R +++ + K + F + W
Sbjct: 123 EGFYCVSCETFFNQ--RDLLEDNRCPDCGRVTSLVKEESYFFKLSKYEDALLKWYENDEL 180
Query: 211 GR 212
Sbjct: 181 CV 182
>gi|49478861|ref|YP_039056.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|68565980|sp|Q6HBM0|SYM1_BACHK RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|49330417|gb|AAT61063.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|313679972|ref|YP_004057711.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
gi|313152687|gb|ADR36538.1| methionyl-tRNA synthetase [Oceanithermus profundus DSM 14977]
Length = 626
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/177 (15%), Positives = 51/177 (28%), Gaps = 11/177 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A I D L R R + +T D +KI + A + P
Sbjct: 14 VNARPHIGHAYTTINADFLARWHRLDGYDTFF-----LTGTDEHGEKIAQAAERAGK--P 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-YEANN 150
+ + + + + T +PR + + + I + + YE
Sbjct: 67 PQQFVDEVAEEFKKAWEVLHISYDDFIRTTEPRHKKVVQRYLQEIYDRGDIYYGEYEGLY 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ + + + R Y K + PG+ P
Sbjct: 127 CVGCERFLTEKELVDGKCPDHGVEPEPRREGNYFFKMEKYRTWLRGHIQKHPGFVRP 183
>gi|77919292|ref|YP_357107.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
gi|77545375|gb|ABA88937.1| methionyl-tRNA synthetase [Pelobacter carbinolicus DSM 2380]
Length = 511
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 22/136 (16%), Positives = 42/136 (30%), Gaps = 9/136 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + D+L R R E V ++ TD + E + +
Sbjct: 14 VNDVPHIGHAYTTVACDMLARYKRAQGQE--VFFLTG-TD-----EHGQKVEKAAQAKGE 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
+ + +++ +L + H + L + + G Y E
Sbjct: 66 TPLELADRVVKRYQALWEKLNISHTDFIRTSQERHKKGVCDLFEKLHATGDIYLGEYEDW 125
Query: 154 FDTSSIPNYGSFSRRK 169
+ T +
Sbjct: 126 YCTPCETFWTETQLMD 141
>gi|196040453|ref|ZP_03107753.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
gi|196028585|gb|EDX67192.1| putative methionyl-tRNA synthetase [Bacillus cereus NVH0597-99]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|157827625|ref|YP_001496689.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
gi|157802929|gb|ABV79652.1| methionyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
Length = 509
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/131 (21%), Positives = 44/131 (33%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R E V +T D+ + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFMRLSGHE-----VMFLTGTDE---HGQKVEKAAIDKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
T + +Q F T + H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSQSFRHLMTAMHISNDDFIRTTEERHKKAVAIFWQKLLDNGSIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|229187283|ref|ZP_04314428.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
gi|228596293|gb|EEK53968.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BGSC 6E1]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|42520232|ref|NP_966147.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|42409970|gb|AAS14081.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 545
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKAK----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
T + + F + + H +I L + G Y
Sbjct: 66 -EMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSY 124
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + K + E+ + +++
Sbjct: 125 SGWYSVRDEAFYQESELIDGKAPTGAEVQWIKEESYFFRLSNW 167
>gi|56961843|ref|YP_173565.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
gi|56908077|dbj|BAD62604.1| methionyl-tRNA synthetase [Bacillus clausii KSM-K16]
Length = 655
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 49/144 (34%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+ + D + R R + V Y +T D+ KI ++A+++ S
Sbjct: 20 HIGHTYTTVAGDAMARYKRLRGYD--VRY---LTGTDEHGQKIEQKAKEKGIS------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
T++ + + +L H + + + ++ G Y E +
Sbjct: 69 LEYTNEMVKPIKELWKKLDISHDDFIRTTEKRHTNMVEKIFEQLVEQGDIYLGEYEGWYC 128
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
S YG + + G +
Sbjct: 129 VSDETFYGERELVDPIKDESGNII 152
>gi|262201453|ref|YP_003272661.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
gi|262084800|gb|ACY20768.1| methionyl-tRNA synthetase [Gordonia bronchialis DSM 43247]
Length = 523
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 23/127 (18%), Positives = 42/127 (33%), Gaps = 9/127 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V ++ TD+ + + +
Sbjct: 28 GAPHIGHAYEYISADVLARFHRLDGYD--VRFLTG-TDV-----HGQKMQQTAEKEGIPT 79
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +N+ +F RL + +H + Q + +G Y +D
Sbjct: 80 AELARRNSDRFQALQDRLGSSYHRFIRTSDDDHKRASEAIWQRMSDNGDIYLDKYSGWYD 139
Query: 156 TSSIPNY 162
Y
Sbjct: 140 VRDETFY 146
>gi|118480122|ref|YP_897273.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|196047520|ref|ZP_03114730.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225867021|ref|YP_002752399.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|187645699|sp|A0RKM3|SYM1_BACAH RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|254782850|sp|C1EYD5|SYM_BACC3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|118419347|gb|ABK87766.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|196021634|gb|EDX60331.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225787890|gb|ACO28107.1| putative methionyl-tRNA synthetase [Bacillus cereus 03BB102]
Length = 544
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + ++ + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEEARGDQCDACSAILDPLDLLEKKCK 171
>gi|298676112|ref|YP_003727862.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
gi|298289100|gb|ADI75066.1| methionyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
Length = 679
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R I D+ R L+ + + VT+V D I+ A
Sbjct: 13 TCGL-PYANGKAHIGHLRTYIPADIYVRALKKHG--QDVTFVCG----SDTHGTPIVFNA 65
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILH 142
+ N + + F + + + ++ +I +
Sbjct: 66 EE------YNTTPEELIKTYHKHFDDIFKSMNVYFDAFGTTEDATNHNRTHAIVNKLIDN 119
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y EI + + ++ +
Sbjct: 120 GYVYSKTIEIAYCPVCDRYLPDRYVKGKCPHCAEAARGDECDQGCGKHL 168
>gi|237751267|ref|ZP_04581747.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
gi|229372633|gb|EEO23024.1| methionyl-tRNA synthetase [Helicobacter bilis ATCC 43879]
Length = 663
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/186 (16%), Positives = 59/186 (31%), Gaps = 18/186 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ DV+ + + V + +T D+ KI E A++
Sbjct: 12 VNDVPHIGHAYTTILADVMKKYWTLRGND--VFF---LTGTDEHGQKIEEAAKKHGIKTI 66
Query: 92 INDAISIITSKNTQQFVK-DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + I+ K + + D + T+ + + ++ AYE
Sbjct: 67 --EYANSISEKFRDTWREYDIDYDKFIRTTYFEHILSVQKAFEIMYDRGDIYKGAYEGMY 124
Query: 151 EIIFDTSSIPNY--GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ ++ +K V E+ + F L K + +
Sbjct: 125 CVGCESFFTQTQVIDGIYCPDCSGKKETRLVKEESYF-----FALSKYQDKLLAWYRENP 179
Query: 209 GRGRPG 214
P
Sbjct: 180 DCIVPS 185
>gi|195109831|ref|XP_001999485.1| GI24536 [Drosophila mojavensis]
gi|193916079|gb|EDW14946.1| GI24536 [Drosophila mojavensis]
Length = 579
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 39/352 (11%), Positives = 79/352 (22%), Gaps = 31/352 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y + V T D+ KI + A +P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYHRLRYPDTEVRLC---TGTDEHGTKIQQAAAA--HEVP 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+++ + F + H + + G+ Y A +
Sbjct: 84 VGQYCDEISARYREVFKAARIEY---DDFIRTTEQRHKLAVSDFWHRLQSRGYIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ + W
Sbjct: 141 GWYCVSDETFLTDSQLRLDEASGARYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVQQE 200
Query: 209 GRGRPGWH-------IECSAMSSHYLGKVFDIHGG---GLDLIFPHHENEIAQSCCADRI 258
R RP + +H D + A +
Sbjct: 201 ARIRPAKFEKILLDTLSEPLPDVSISRPANRVHWAIPVPNDETQTVYVWLDALINYLSSL 260
Query: 259 E-KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
H K LL R +
Sbjct: 261 GYPNEQYLAHWPPAQQVIGKDILKFHGIYWPAFLLAAGLEPPRQLHVHSHWTVDGQKMSK 320
Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH 369
+ + + +G ++ + + V A++ L+
Sbjct: 321 SKHNVVDPVEAAKQYTMEGLRYFLLREG------VAHSDGNFSHVKALRILN 366
>gi|116747604|ref|YP_844291.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|116696668|gb|ABK15856.1| methionyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 636
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 51/187 (27%), Gaps = 19/187 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A IV DV+ R + +T D DKI++ A
Sbjct: 13 VNAEPHIGHAYTTIVADVMNRFHKLMGFGTFF-----LTGTDEHGDKIVQAAADAGT--- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN- 149
A + + F + ++L HI + +++Q + G +
Sbjct: 65 ---APKEYADRISGMFKEAWSKLNISNDHFIRTTDPEHIRVVQHILQQVYDSGDITFSTY 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + K + ES
Sbjct: 122 RGLYCVGCERFYTERELVDGKCPDHDKEPIEREEANYFFR---MSKYQNWLIEHIESNPD 178
Query: 210 RGRPGWH 216
RP +
Sbjct: 179 FIRPERY 185
>gi|297193195|ref|ZP_06910593.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
25486]
gi|197720465|gb|EDY64373.1| methionyl-tRNA synthetase [Streptomyces pristinaespiralis ATCC
25486]
Length = 525
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 13 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANGVTPQ 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + + H ++ +Q++ G Y
Sbjct: 68 --EWCDKLVEEAWKPLWEHLNIAN--DDFIRTTEKRHTDRVQEFVQDLYDKGEIY 118
>gi|85374072|ref|YP_458134.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
gi|84787155|gb|ABC63337.1| methionyl-tRNA synthetase [Erythrobacter litoralis HTCC2594]
Length = 519
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/194 (15%), Positives = 53/194 (27%), Gaps = 17/194 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I DV+ R R + V + T D+ K+ +A ++ S
Sbjct: 16 GRPHIGHAYEAIAADVIARFQRQRGLD--VRFQ---TGTDEHGLKMARKAEEQGKS---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQMIYLIQNIILHGHAYEANN 150
+ + + F L + Q I+ +
Sbjct: 67 --PRDLADEMSGYFKAMCDALNVSCDRFIRTVDDDHHRASQAIWRAMEAAGDLYLDRYEG 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + + DE+ P ++ + F L K + ESP
Sbjct: 125 WYSVRDEAYYDESELVDGEGDEKLSPQGTPVEWTVEESWFFRLSKYEDKLLKLLESPGFL 184
Query: 211 GRPGWHIECSAMSS 224
E A
Sbjct: 185 EPASRRNEMVAFVK 198
>gi|209964481|ref|YP_002297396.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
gi|209957947|gb|ACI98583.1| methionyl-tRNA synthetase MetG [Rhodospirillum centenum SW]
Length = 520
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/133 (16%), Positives = 42/133 (31%), Gaps = 9/133 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R R + V ++ TD + + +
Sbjct: 16 VNDAPHIGHAYTTVACDVMARFKRLDGFD--VKFLTG-TD-----EHGQKVQKSAELAGI 67
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
+ +N++ F + L H+ + L Q + G Y +
Sbjct: 68 TPKQMADRNSENFRELARLLNVSNDDFIRTTEPRHVTAVQALWQRLQESGDVYLGSYSGW 127
Query: 154 FDTSSIPNYGSFS 166
+ +G
Sbjct: 128 YSVRDEAYFGEDE 140
>gi|149195308|ref|ZP_01872396.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
gi|149134572|gb|EDM23060.1| methionyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
Length = 634
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 45/162 (27%), Gaps = 15/162 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D + R R + +T D+ KI E AR++ S
Sbjct: 17 VNDVPHIGHAYTTIIADTIARYSRLKGIDTFF-----LTGTDEHGQKIEEAARKKGKSPK 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ I++K + + + + H + + G Y+
Sbjct: 72 --EYADEISAKFKELWDE---FEISYDKFIRTTDEAHKRGVQKAFLEMYKKGDIYKDYYE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
S ++ K
Sbjct: 127 GHYCVSCESFIAPSQLVNDELCPDCGKPTRIIKEESYFFRLS 168
>gi|255322574|ref|ZP_05363719.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
gi|255300482|gb|EET79754.1| methionyl-tRNA synthetase [Campylobacter showae RM3277]
Length = 639
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 19/183 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D + R R + TY T D+ KI + A ++ +
Sbjct: 13 VNDVPHIGHAYTTVIADTVARFARLKGDD---TYFM--TGTDEHGQKIEQAAAKKGYT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + +F + + H R T H + G Y+
Sbjct: 66 ----PQAYADEISAKFRELWDKFEIS-YDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGE 120
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
E + S + + +++++ K + F + W
Sbjct: 121 YEGYYCVSCESFFTQ--TQLLEDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENE 178
Query: 210 RGR 212
Sbjct: 179 DCI 181
>gi|166367026|ref|YP_001659299.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
gi|166089399|dbj|BAG04107.1| methionyl-tRNA synthetase [Microcystis aeruginosa NIES-843]
Length = 537
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 33/182 (18%), Positives = 59/182 (32%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A IV DV+ R R + IT D+ KI A + +
Sbjct: 19 VNDIPHIGSAYTTIVADVMARWQRLQGNSVLL-----ITGTDEHGQKIERTAAAKGLNPQ 73
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + K + + T PR H + + + G Y +
Sbjct: 74 --EHCDRIATSFANLWAKLHIQYDRFSRTTAPR---HQAIVNEFFERVWEKGDIYLDRQQ 128
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + T + ++ + F L K T +E ++
Sbjct: 129 GWYCVACEEFKEKRELLDNGCCPIHTNLAAEWRDEENYFFRLSKYQTQLEQFYQEQPDFI 188
Query: 212 RP 213
+P
Sbjct: 189 QP 190
>gi|153952241|ref|YP_001398097.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
269.97]
gi|152939687|gb|ABS44428.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. doylei
269.97]
Length = 628
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 42/333 (12%), Positives = 85/333 (25%), Gaps = 72/333 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERAR------- 84
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDMPHLGHAYTTIIADTLARFYRLQGHETKF-----LTGTDEHGQKIEEAAKLRNSTPQ 65
Query: 85 --QEHPSIPINDAISII------TSKNTQQFVKDTTRLACLAPTHQ--PRATNHIPQMIY 134
S + ++ T + + L + +
Sbjct: 66 EYANKISFEFKKLWDELEISYDIYARTTNTMHIEFVKAMFLKMWQKGDIYKDEYEGHYCI 125
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK--------- 185
++ + ++ ++ + + +
Sbjct: 126 SCESFFTQSQLINNCSCPDCGKNTTILKEESYFFRLSKYQDKILQWYEEKDPILPKNKKN 185
Query: 186 ----------------KNPADFILWKRSTPMEPG-----WESPWGRGRPGWHIECSAMSS 224
+ D+ + +P W + +
Sbjct: 186 ELINFVQSGLKDLSITRTSFDWGIKLPQEMNDPKHIIYVWLDALFIYISSLDFQSKGEKA 245
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKMSKS 281
+ +H G D++ H A A + +G+ EG KMSKS
Sbjct: 246 KFW--PAHVHLAGKDILRFH-----AIYWPAFLMSVDLPLPKFIGAHGWWTKEGEKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
GN + E+++ + + R +L
Sbjct: 299 KGNVVKPKEVVDA-------YGSEAFRYFLLRE 324
>gi|328948995|ref|YP_004366332.1| Lysyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
gi|328449319|gb|AEB15035.1| Lysyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
Length = 538
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 16/49 (32%), Positives = 24/49 (48%), Gaps = 4/49 (8%)
Query: 23 PSNIRMYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
++ +Y C G T HIGN R +I D++ R LR K V ++
Sbjct: 24 KGDLDLYTCASGITPSGTVHIGNFREIITVDLIVRALRDRG--KNVRFI 70
>gi|223039853|ref|ZP_03610137.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
gi|222878862|gb|EEF13959.1| methionyl-tRNA synthetase [Campylobacter rectus RM3267]
Length = 639
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 19/183 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D + R R + TY T D+ KI + A ++ +
Sbjct: 13 VNDVPHIGHAYTTVIADTVARFARLKGDD---TYFM--TGTDEHGQKIEQAAAKKGYT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + +F + + H R T H + G Y+
Sbjct: 66 ----PQAYADEISAKFRELWDKFEIS-YDHFIRTTDDYHKLTAQNAFLKMYQKGDIYKGE 120
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
E + S + + +++++ K + F + W
Sbjct: 121 YEGYYCVSCESFFTQ--TQLLEDERCPDCGRPTNLVKEESYFFKLSKYQDALLKWYEENE 178
Query: 210 RGR 212
Sbjct: 179 DCI 181
>gi|224002048|ref|XP_002290696.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220974118|gb|EED92448.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 516
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 17/57 (29%), Positives = 27/57 (47%), Gaps = 7/57 (12%)
Query: 402 NKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
+++I AI K + ER++ K + F AD IR++L D D R W+
Sbjct: 376 SEDIQKAIGKKLAERILARKNRNFDLADDIRQELR-------DEYVVDVDDRTKTWR 425
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 23/51 (45%), Gaps = 5/51 (9%)
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY-----KNPDNG 451
I L++ER+ + F +AD I+++L S G + D + +
Sbjct: 235 ENEIHLLIRERMECKFARDFQTADRIQEELLSHGVDVHDGFKEWRADGEGW 285
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 10/37 (27%), Positives = 14/37 (37%)
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLES 437
L++ I LV ER + AD I +L
Sbjct: 309 LSEAEIEEINALVAERSECKANADYDRADAIFAELSD 345
>gi|296131644|ref|YP_003638891.1| methionyl-tRNA synthetase [Thermincola sp. JR]
gi|296030222|gb|ADG80990.1| methionyl-tRNA synthetase [Thermincola potens JR]
Length = 647
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 62/421 (14%), Positives = 103/421 (24%), Gaps = 84/421 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI A+
Sbjct: 16 DNLHIGHAYTTVAADTIARYKRMTGYD--VRF---LTGSDEHGQKIERTAKARGVEPIDY 70
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I+ D + T L + ++ YE
Sbjct: 71 VD-RIVAGFKNLWRHLDVHYDDFIRTTEPRHKEVVQKIFTRLYEQGDIYKSEYEGLYCTP 129
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR--- 210
+T + + E Y + R P + P R
Sbjct: 130 CETFWTERQAEEGNCPDCGRPVERVREESYFFRMSKYADRLLRYIEENPDFIQPVSRRNE 189
Query: 211 --------------------------------------------GRPGWHIECSAMSSHY 226
G+ E + Y
Sbjct: 190 MVNFIKQGLEDLCVSRTTFDWGIKVPFDPKHVVYVWVDALTNYISALGYGTENDELYKKY 249
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
D+H G D++ H E + +G+L LEG KMSKS GN I
Sbjct: 250 W--PADVHLVGKDIVRFHTIIWPILLMAIG--EPLPKKVMGHGWLLLEGGKMSKSKGNVI 305
Query: 287 TINELLETKKFGGRSWPA--------------PVIRLAMLMTHYREPIDFTVQRLTEAEI 332
L++ + + + + + + + E
Sbjct: 306 DPLVLIDKYGVDAIRYYLLRELPFGSDGYYAEEALIQRINSDLANDLGNLISRTIAMVEK 365
Query: 333 LLSKWPQTSTSKGIIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+ Q T K ID L +A+ ++ KL + K D
Sbjct: 366 YFNGMVQAPTEKEEIDEDLRQLAMVTVEDYRNQMEKLELSNALASIWKLIGRANKYIDET 425
Query: 383 P 383
Sbjct: 426 A 426
>gi|229158640|ref|ZP_04286698.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
gi|228624624|gb|EEK81393.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 4342]
Length = 544
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRSLGFTYDCYTRTDGEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|296271126|ref|YP_003653758.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
gi|296093913|gb|ADG89865.1| methionyl-tRNA synthetase [Thermobispora bispora DSM 43833]
Length = 530
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 14/163 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V + +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--ERVWF---LTGTDEHGQKIMRTAEANGTTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + + + + H ++ +Q++ G Y+
Sbjct: 78 --EWCDKLVETAWKPLWEHLEIAN--DDFIRTTEPRHTKRVQEFVQDLYDKGEIYKGGYE 133
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ G ++ K
Sbjct: 134 GPYCVGCEEYKSPGELLEGELCPIHKRPIEWLKEENYFFRLSA 176
>gi|49658911|emb|CAF28538.1| putative tRNA synthetase [Yersinia pseudotuberculosis]
Length = 486
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 60/436 (13%), Positives = 108/436 (24%), Gaps = 90/436 (20%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---------KIIER 82
PT H+G+ P + DV+ R L+ + V +V T DD K + R
Sbjct: 11 PTPNGDLHLGHLSGPFLAADVMQRRLKQLGHD--VLFV---TYSDDYQSYLPRKTKALHR 65
Query: 83 -----------------------------ARQEHPSIPINDAISIITSKNTQQFVKDTTR 113
A + + + + T+ T
Sbjct: 66 QPFAYARLMRQAMQLSLELVNIRFDTFMQAADTPVYQHSGEHYAKLIAGQTELKEHKTFY 125
Query: 114 LACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN-----EIIFDTSSIPNYGSFSRR 168
A + H + + + ++
Sbjct: 126 CATCNLYGYEGFGRTQCNWCGTSSDTSQCEHCARVPDIEKITAMTCMSCQGAMQPVQVKQ 185
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-------------- 214
I + ++ P L + W RPG
Sbjct: 186 HIWTIGQNYPAVKAALQQRPMRPCLTGYLDDVLSNESEQWSLTRPGDAGLPVAALDNYPL 245
Query: 215 -------------------WHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
H E + + +H G D + H + A
Sbjct: 246 HTWFLGLSGYRSCVESYLATHPERGEFAEWWAPDTELVHLLGFDCSYSHAVGYSSLLL-A 304
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
D+ +I N FL L+G S S G+ + I +L +P+ IRL +T
Sbjct: 305 DQTGPCPGTFITNRFLKLDGEDFSTSRGHAVWIKDLTG-------QYPSDAIRLFSALTA 357
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
+ + + P + ++ +ID + L S L S
Sbjct: 358 PEIAVSNFSREQFQHWYHQIFLPLVTQAEQVIDSGITLTTEQWLRLRSHSACLDWQQAAS 417
Query: 376 TKNHDLLPIFNASAHI 391
+ + + A
Sbjct: 418 LEAFSIAGMARAVLDF 433
>gi|150400079|ref|YP_001323846.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
gi|187647751|sp|A6URW2|SYM_METVS RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|150012782|gb|ABR55234.1| methionyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 663
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 50/157 (31%), Gaps = 24/157 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D+ R LR + V +V TD + I +A +E +
Sbjct: 17 HLGHARSTYIPADIFTRYLRLK--RENVFHVGG-TDNHGV--PITLKAEKEGVT------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + +D L + ++ HI + + +G+ Y
Sbjct: 66 PLDIVDRYHNAIKEDLDSLNVSFDSFGRTHSDIHIETAQEFYKTLKENGYIY-------- 117
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ Y + ++ + + P +
Sbjct: 118 EKEIEQFYCEKCSMSLADRYVEGKCPFCEGEARGDHC 154
>gi|99034647|ref|ZP_01314595.1| hypothetical protein Wendoof_01000592 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 471
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKAK----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
T + + F + + H +I L + G Y
Sbjct: 66 -EMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSY 124
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + K + E+ + +++
Sbjct: 125 SGWYSVRDEAFYQESELIDGKAPTGAEVQWIKEESYFFRLSNW 167
>gi|315301039|ref|ZP_07872357.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
gi|313630592|gb|EFR98407.1| methionyl-tRNA synthetase [Listeria ivanovii FSL F6-596]
Length = 664
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|120602218|ref|YP_966618.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|120562447|gb|ABM28191.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 663
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 65/422 (15%), Positives = 108/422 (25%), Gaps = 80/422 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D + R R + +T D DKI++ A + S
Sbjct: 13 VNAKPHLGHAYTTIVADSMRRFQRLLGKDTYF-----LTGTDEHGDKIVQAAEKAGVS-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ QF L H + +Q + +G Y
Sbjct: 66 ----PKDFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDNGDIYFGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ + K + Y + K+ P +
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHQVKPEYIAEKNYFFRMSKYQGWLKQHILDNPDFIR 181
Query: 207 P----------------------WGRGRPGWHIECSAMSSHYLGKVFD------------ 232
P + R W IE + + FD
Sbjct: 182 PERYRNEVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSALGWP 241
Query: 233 ------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H D++ PH A +E N+ +H + KMSK
Sbjct: 242 DGDRFANYWPGVQHLVAKDILKPHAVFWPTMLKAA-GLEPYNNLNVHGY-WLVRDTKMSK 299
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSK- 336
S GN ++ E+++ + + E + L S+
Sbjct: 300 SLGNVVSPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNLYSRV 359
Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--------LHKLARESTKNHDLLPIFNAS 388
T+ G + PA + D T+ A+ L R S L + A
Sbjct: 360 LSMTAKYFGGVVPAPGAYTEED-ETLRALAVEAQRNFCNLFGRVRFSNALESLWELVRAL 418
Query: 389 AH 390
Sbjct: 419 NK 420
>gi|225677328|ref|ZP_03788304.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590629|gb|EEH11880.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 541
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 50/163 (30%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKAK----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
T + + F + + H +I L + G Y
Sbjct: 66 -EMQPKEFTDEVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSY 124
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + K + E+ + +++
Sbjct: 125 SGWYSVRDEAFYQESELIDGKAPTGAEVQWIKEESYFFRLSNW 167
>gi|152992719|ref|YP_001358440.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
gi|151424580|dbj|BAF72083.1| methionyl-tRNA synthetase [Sulfurovum sp. NBC37-1]
Length = 649
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/184 (12%), Positives = 44/184 (23%), Gaps = 21/184 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D AHIG+A I+ D L R R + +T D+ KI E A+ +
Sbjct: 17 VNDIAHIGHAYTTIIADTLARYSRMSGLDTFF-----LTGTDEHGQKIEESAKARGKTS- 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+ + F +H+ + + + +G Y+
Sbjct: 71 -----QEYADEISATFKNLWDDFGISYDKFIRTTDADHMKGVQKAFKVMYDNGDIYKDVY 125
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ + + + W +
Sbjct: 126 KGHYCISCETFFPESQLVDGEFCPECGKPTTIVEEESYFFKLS----AYEDKLLAWYNDN 181
Query: 209 GRGR 212
Sbjct: 182 PNCI 185
>gi|15643843|ref|NP_228891.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|6094407|sp|O33925|SYM_THEMA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|4981630|gb|AAD36162.1|AE001768_11 methionyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|2645225|gb|AAB87143.1| methionyl-tRNA synthetase [Thermotoga maritima MSB8]
Length = 629
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R+ + V + +T D+ K+++ A+Q
Sbjct: 12 VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFF---LTGTDEHGQKVLQAAQQAGKDPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + K + + + + H+ + + + +G Y+ +
Sbjct: 67 --EFCDELAEKFKRLWKEL---KITNDYFIRTTDEMHMKTVQEFVAKMKENGDVYKGIYK 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+ + K E++
Sbjct: 122 GWYCVPCETFWNEDEVIKEGEERFCPECKR 151
>gi|254933016|ref|ZP_05266375.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|293584575|gb|EFF96607.1| methionyl-tRNA synthetase [Listeria monocytogenes HPB2262]
gi|328469714|gb|EGF40636.1| methionyl-tRNA synthetase [Listeria monocytogenes 220]
gi|332310585|gb|EGJ23680.1| Methionyl-tRNA synthetase [Listeria monocytogenes str. Scott A]
Length = 664
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|116871573|ref|YP_848354.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
gi|116740451|emb|CAK19571.1| methionyl-tRNA synthetase [Listeria welshimeri serovar 6b str.
SLCC5334]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|223995725|ref|XP_002287536.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976652|gb|EED94979.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 435
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 401 LNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDY 445
++++ IE+LV++R + + K + +D +R++L+ G L+D
Sbjct: 262 ISEDELKEIEQLVKKRDMFRRKKDYKQSDTLREELKFEFGVHLDDR 307
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
I E S + +L+ +R KMK F +AD +
Sbjct: 342 IPTSPESDALVDSDLVLRLLNKRDRARKMKDFDTADAL 379
>gi|217965737|ref|YP_002351415.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|217335007|gb|ACK40801.1| methionyl-tRNA synthetase [Listeria monocytogenes HCC23]
gi|307569716|emb|CAR82895.1| metS [Listeria monocytogenes L99]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|157415105|ref|YP_001482361.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81116]
gi|157386069|gb|ABV52384.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81116]
Length = 628
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|46906409|ref|YP_012798.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
gi|67461803|sp|Q724N6|SYM_LISMF RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|46879673|gb|AAT02975.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
F2365]
Length = 665
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|86150271|ref|ZP_01068498.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88597490|ref|ZP_01100724.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
84-25]
gi|218562466|ref|YP_002344245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|25009405|sp|Q9PP85|SYM_CAMJE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|85839387|gb|EAQ56649.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CF93-6]
gi|88190082|gb|EAQ94057.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
84-25]
gi|112360172|emb|CAL34966.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|284926083|gb|ADC28435.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
IA3902]
Length = 628
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|86152046|ref|ZP_01070258.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315124355|ref|YP_004066359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|85840831|gb|EAQ58081.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
260.94]
gi|315018077|gb|ADT66170.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 628
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|307747746|gb|ADN91016.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
Length = 628
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|290892267|ref|ZP_06555262.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
gi|290558093|gb|EFD91612.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-071]
Length = 664
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|226222806|ref|YP_002756913.1| methionyl-tRNA synthetase [Listeria monocytogenes Clip81459]
gi|254992034|ref|ZP_05274224.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-064]
gi|225875268|emb|CAS03965.1| methionyl-tRNA synthetase [Listeria monocytogenes serotype 4b str.
CLIP 80459]
Length = 664
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|254825910|ref|ZP_05230911.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|254853705|ref|ZP_05243053.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|255519716|ref|ZP_05386953.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-175]
gi|300764921|ref|ZP_07074910.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
gi|258607084|gb|EEW19692.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-503]
gi|293595148|gb|EFG02909.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-194]
gi|300514408|gb|EFK41466.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N1-017]
Length = 664
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|16799293|ref|NP_469561.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
gi|25009380|sp|Q92F90|SYM_LISIN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|16412635|emb|CAC95449.1| methionyl-tRNA synthetase [Listeria innocua Clip11262]
Length = 664
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|315638476|ref|ZP_07893653.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
gi|315481467|gb|EFU72094.1| methionine--tRNA ligase [Campylobacter upsaliensis JV21]
Length = 626
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 37/286 (12%), Positives = 71/286 (24%), Gaps = 31/286 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R + +T D+ KI + A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLSGHKTLF-----LTGTDEHGQKIEQAAK------N 59
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYE-- 147
N + K + +F K R T HI + + + G Y+
Sbjct: 60 KNHSPKEYADKISLEFKKLWDEFEIS-YDIYARTTDERHIKFVKQVFLKMWEKGDIYKGE 118
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
S +K K + W
Sbjct: 119 YEGYYCVSCESFFTQSQLINQKCCPDCGKETRLLKEESYFFRLS----KYEKDILKWYES 174
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
E + L + E I + + +W+
Sbjct: 175 EPIVPKNKKAELVNFIENG--------LKDLSITRTSFEWGIKIPSNLNDDKHIIYVWLD 226
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
F+ + ++ + + N + + + A ++
Sbjct: 227 ALFIYISSLELDEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMS 272
>gi|218291061|ref|ZP_03495093.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
gi|218239015|gb|EED06221.1| methionyl-tRNA synthetase [Alicyclobacillus acidocaldarius LAA1]
Length = 650
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 58/425 (13%), Positives = 104/425 (24%), Gaps = 94/425 (22%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI +RA Q
Sbjct: 16 DKLHIGHAYTTVAADAIARYKRLRGYD--VFF---LTGTDEHGLKIQQRAEQAGLE---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+L H + + + ++ G Y + +
Sbjct: 67 --PKAFLDPIIAWIQDLWRKLDISYDDFIRTTELRHERVVEQIFERLLQQGDIYLSEYQG 124
Query: 153 IFDTSSIPNYGSFS----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ T + + +++ E Y + + PG+ P
Sbjct: 125 WYCTPCESYWAERELVEGKCPQCGREVQFVREESYFFRMSKYVDRLLQYYEENPGFIEPV 184
Query: 209 G--------RGRPGWHIECSAMSSHYLGKVFD---------------------------- 232
PG C + +S G
Sbjct: 185 SRKTEMIKNFIEPGLQDLCVSRTSFDWGVHVPSNPKHVVYVWLDALVNYISAIGYLSDDP 244
Query: 233 -------------IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
+H G D++ H +GF ++G KMS
Sbjct: 245 NERAKFERYWPADVHVVGKDIVRFHAVYWPIILMALG--LPLPKKVFGHGFFLVKGGKMS 302
Query: 280 KSNGNFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQ 325
KS GN I L++ + + + + + +
Sbjct: 303 KSKGNVIDPLSLVDRYGRDAFRYFLLREIPFGQDGTFTPEGMVERLNYDLANDFGNLVHR 362
Query: 326 RLTEAEILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARES 375
T S +D A + + L A+ L L R +
Sbjct: 363 TAAMLNRFNDGVVPTPGSLTDVDRALRELAAEAKAKVEENMDQLQFSVALAELWNLVRAA 422
Query: 376 TKNHD 380
K D
Sbjct: 423 NKYID 427
>gi|47567080|ref|ZP_00237797.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
gi|47570323|ref|ZP_00240969.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
gi|47553008|gb|EAL11413.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
gi|47556398|gb|EAL14732.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHKEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|283957174|ref|ZP_06374638.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791350|gb|EFC30155.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 628
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|205356336|ref|ZP_03223101.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8421]
gi|205345721|gb|EDZ32359.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
CG8421]
Length = 628
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|121612346|ref|YP_001000523.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|167005457|ref|ZP_02271215.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
gi|87249443|gb|EAQ72403.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
81-176]
Length = 628
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|326403063|ref|YP_004283144.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
gi|325049924|dbj|BAJ80262.1| methionyl-tRNA synthetase [Acidiphilium multivorum AIU301]
Length = 511
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A + DVL R R + V ++ TD + E + N
Sbjct: 14 VNGAPHIGHAYTSVAADVLARFKRLDGFD--VHFLTG-TD-----EHGQKVEATARANNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
A T + +F + HI + Q I G + E
Sbjct: 66 APQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|313635219|gb|EFS01522.1| methionyl-tRNA synthetase [Listeria seeligeri FSL N1-067]
Length = 665
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|313621117|gb|EFR92184.1| methionyl-tRNA synthetase [Listeria innocua FSL S4-378]
Length = 657
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|289433525|ref|YP_003463397.1| Methionyl-tRNA synthetase [Listeria seeligeri serovar 1/2b str.
SLCC3954]
gi|289169769|emb|CBH26305.1| metS [Listeria seeligeri serovar 1/2b str. SLCC3954]
gi|313639884|gb|EFS04591.1| methionyl-tRNA synthetase [Listeria seeligeri FSL S4-171]
Length = 665
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|86153308|ref|ZP_01071512.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843034|gb|EAQ60245.1| methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 628
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDDFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|47096170|ref|ZP_00233769.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|284803084|ref|YP_003414949.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284996225|ref|YP_003417993.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
gi|47015418|gb|EAL06352.1| methionyl-tRNA synthetase [Listeria monocytogenes str. 1/2a F6854]
gi|284058646|gb|ADB69587.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5578]
gi|284061692|gb|ADB72631.1| methionyl-tRNA synthetase [Listeria monocytogenes 08-5923]
Length = 665
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|152990541|ref|YP_001356263.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
gi|151422402|dbj|BAF69906.1| methionyl-tRNA synthetase [Nitratiruptor sp. SB155-2]
Length = 632
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 49/184 (26%), Gaps = 18/184 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D R R + +T D+ KI E A++ +
Sbjct: 13 VNDVPHIGHAYTTIIADSAARYFRLNGYDTFF-----LTGTDEHGQKIEEAAKKRGKTPQ 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ I++K + + + HI + + + G Y+
Sbjct: 68 --EYADEISAKFKALWDE---FEISYDKFIRTTNPEHIIGVQKAFEKMYEKGDIYKGEYE 122
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + K L K + + +
Sbjct: 123 GHYCISCEAFFPESQLIDEEFCPDCGKQTSIVKEESYFFK---LSKYQDKLLELYRTNDA 179
Query: 210 RGRP 213
P
Sbjct: 180 FVLP 183
>gi|148259982|ref|YP_001234109.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
gi|146401663|gb|ABQ30190.1| methionyl-tRNA synthetase [Acidiphilium cryptum JF-5]
Length = 511
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 38/131 (29%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+A + DVL R R + V ++ TD + E + N
Sbjct: 14 VNGAPHIGHAYTSVAADVLARFKRLDGFD--VHFLTG-TD-----EHGQKVEATARANNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
A T + +F + HI + Q I G + E
Sbjct: 66 APQEFTDRIAGEFRAMAQAMNISNDDFIRTTEPRHIRSCQAIWQAIERAGAIELGHYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|298241842|ref|ZP_06965649.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
gi|297554896|gb|EFH88760.1| valyl-tRNA synthetase [Ktedonobacter racemifer DSM 44963]
Length = 818
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/166 (15%), Positives = 44/166 (26%), Gaps = 20/166 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIER 82
PTV HIG+ DV+ R R + V Y DD K I+R
Sbjct: 44 PTVSGELHIGHCYSYTQADVIARFHRMLG--ERVLYPMGF---DDNGLPTERYVEKTIKR 98
Query: 83 ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-----NHIPQMIYLIQ 137
E + + + ++F RL+ +T Q ++
Sbjct: 99 KALEMELPEFLEQCHTLIRQTEERFETLWRRLSLSIDWRYRYSTISPQAQRTSQWSFIQL 158
Query: 138 NIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+A A + + + + +
Sbjct: 159 YQAKRVYALPAPTLWCPECQTAIAQAEVDDTTLPTRFSTLAFTLEN 204
>gi|229181329|ref|ZP_04308659.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
gi|228602222|gb|EEK59713.1| Methionyl-tRNA synthetase 2 [Bacillus cereus 172560W]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|57237679|ref|YP_178927.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|57166483|gb|AAW35262.1| methionyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|315058288|gb|ADT72617.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
Length = 628
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|16802223|ref|NP_463708.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|224500370|ref|ZP_03668719.1| methionyl-tRNA synthetase [Listeria monocytogenes Finland 1988]
gi|224503503|ref|ZP_03671810.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL R2-561]
gi|254829268|ref|ZP_05233955.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|254832524|ref|ZP_05237179.1| methionyl-tRNA synthetase [Listeria monocytogenes 10403S]
gi|254901038|ref|ZP_05260962.1| methionyl-tRNA synthetase [Listeria monocytogenes J0161]
gi|254913894|ref|ZP_05263906.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
gi|254938315|ref|ZP_05270012.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|255026302|ref|ZP_05298288.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
gi|255029121|ref|ZP_05301072.1| methionyl-tRNA synthetase [Listeria monocytogenes LO28]
gi|25009372|sp|Q8YAF2|SYM_LISMO RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|16409534|emb|CAC98392.1| methionyl-tRNA synthetase [Listeria monocytogenes EGD-e]
gi|258601679|gb|EEW15004.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL N3-165]
gi|258610927|gb|EEW23535.1| methionyl-tRNA synthetase [Listeria monocytogenes F6900]
gi|293591911|gb|EFG00246.1| methionyl-tRNA synthetase [Listeria monocytogenes J2818]
Length = 664
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|229193317|ref|ZP_04320267.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
gi|228590118|gb|EEK47987.1| Methionyl-tRNA synthetase 2 [Bacillus cereus ATCC 10876]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|256370611|ref|YP_003108436.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
gi|256009403|gb|ACU52763.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri SMDSEM]
Length = 553
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 46/161 (28%), Gaps = 16/161 (9%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPI 92
HIG+ + D+ R L+ K V ++ TD + I +A++E S
Sbjct: 17 GPIHIGHLSGVYLPADIFVRYLKSNG--KNVIFISG-TDEHGV--PITIKAKEEGLS--- 68
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNE 151
+ +K ++ L + H I + + +E +E
Sbjct: 69 ---PQELVNKYHSLIKNSLKKMGILFDNFSRTTSKIHFKTSIKFFKILSKKKILFEKESE 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
FD R I + +K
Sbjct: 126 HYFDKKVKKFLPDRYIRGICPKCSYKAAYGDQCEKCGGSIS 166
>gi|313625533|gb|EFR95248.1| methionyl-tRNA synthetase [Listeria innocua FSL J1-023]
Length = 655
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|257063479|ref|YP_003143151.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
gi|256791132|gb|ACV21802.1| methionyl-tRNA synthetase [Slackia heliotrinireducens DSM 20476]
Length = 526
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 59/429 (13%), Positives = 101/429 (23%), Gaps = 101/429 (23%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A I D + R R + V +V T +D+ KI E A + +
Sbjct: 15 VNAAPHLGTAYTTIAADTVARYQRMNGYD--VAFV---TGLDEHGQKIAETAEKNGTTPQ 69
Query: 92 IN---------DAISIITSKNTQQ--------------FVKDTTRLACLAPTHQPRATNH 128
+A ++ T F D L +
Sbjct: 70 AWCDSMVPAFDEAWDMLDITYTDFVRTSSDRQTRTVQKFWNDIYEKGYLYKSAYEGWYCV 129
Query: 129 IPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN- 187
+ Y ++ + + + + K+ E + + H
Sbjct: 130 HEETYYAESDLEKNEDGEFICPDCKRPVRHMASGEENWFFKLSEFQEPLLKFYEEHPDFI 189
Query: 188 ------PADFILWKRSTPMEPGWESPWGRGRP-----------------GWHIECSAMSS 224
K S + G P +
Sbjct: 190 RPETRRNEVVTFVKSGLQDLSISRSTFDWGIPLPFDEGHVCYVWADALLAYLTGIGYADP 249
Query: 225 HYLGK-----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
G+ H G D+ H A A +GFL + G KMS
Sbjct: 250 EREGEFEARWPMQYHFVGKDITRFHCVIWPAMLMAAG--LPVTGTVFGHGFLLVGGEKMS 307
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY----------REPIDFTVQRLTE 329
KS GN I +L+ + + + R + R +
Sbjct: 308 KSKGNGIKPADLV-------KVYGSDAYRYYFMSDVRFGHDGNISIERMTQVYNADLANT 360
Query: 330 AEILLSKW--PQTSTSKGIIDPAVLSALYNDL--------------------NTVSAIQA 367
L S+ G + + N A+ A
Sbjct: 361 WGNLCSRVFNMVGKYFDGKVPEVPAELKDAENPLRTIAEGLYAKVDPCMAEVNFTDAVAA 420
Query: 368 LHKLAREST 376
+ +LA +
Sbjct: 421 IQELAGAAN 429
>gi|229082281|ref|ZP_04214744.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
gi|228700713|gb|EEL53236.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-2]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|206970493|ref|ZP_03231446.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
gi|206735070|gb|EDZ52239.1| putative methionyl-tRNA synthetase [Bacillus cereus AH1134]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|57242363|ref|ZP_00370302.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
gi|57017043|gb|EAL53825.1| methionyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
Length = 626
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 38/284 (13%), Positives = 76/284 (26%), Gaps = 27/284 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R + +T D+ KI + A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLSGHKTLF-----LTGTDEHGQKIEQAAK------N 59
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
N + K + +F K R T HI + + + G Y+
Sbjct: 60 KNYSPKEYADKISLEFKKLWDEFEIS-YDIYARTTDERHIKFVKQVFLKMWEKGDIYKGE 118
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
E + S + + + K + F + W
Sbjct: 119 YEGYYCVSCESFFTQSQLISQCGCPDCGKETK--LLKEESYFFRLSKYEKNILKWYESEP 176
Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNG 269
E + L + E I + + +W+
Sbjct: 177 IVPKNKKAELVNFIENG--------LKDLSITRTSFEWGIKIPSNLNDDKHVIYVWLDAL 228
Query: 270 FLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
F+ + ++ + + N + + + A ++
Sbjct: 229 FIYISSLELDEKSENLGFLPAFVHLVGKDILRFHAIYFPAFLMS 272
>gi|58617532|ref|YP_196731.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
gi|58417144|emb|CAI28257.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
Length = 506
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 52/324 (16%), Positives = 87/324 (26%), Gaps = 69/324 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ ++ D++ R R V + IT D+ KI + A +
Sbjct: 13 VNDVPHIGHVYTTLISDIIARFKRLDGY--NVKF---ITGTDEHGQKIEKAAAK------ 61
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N ++ T + F T + H + L + + +G Y N
Sbjct: 62 ANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTELWRRLYHYGKIYLGNY 121
Query: 151 EIIFDTSSIPNYGSFSRRK-----------------IDEQKMGTRVPEKYHKKNPADFIL 193
+ Y ++ K+P I
Sbjct: 122 SGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHPNFIIP 181
Query: 194 WKRSTPMEPGWESPWGRG-----RPGWHIECSAMSSHYL--------------------- 227
R + +S W I +H +
Sbjct: 182 RHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEINS 241
Query: 228 ---------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+H G D++ H A A + +G+ EG+K+
Sbjct: 242 SEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAA--ELPLPKQILAHGWWTNEGQKI 299
Query: 279 SKSNGNFITINELLETKKFGGRSW 302
SKS GN I EL+E +
Sbjct: 300 SKSLGNVINPFELIEEFGVDQVRY 323
>gi|228955300|ref|ZP_04117308.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
gi|228804433|gb|EEM51044.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
kurstaki str. T03a001]
Length = 544
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|172036861|ref|YP_001803362.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|171698315|gb|ACB51296.1| methionyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
Length = 535
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/182 (17%), Positives = 60/182 (32%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I+ DV+ R R + V + IT D+ KI A ++
Sbjct: 20 VNGVPHIGSAYTTIIADVIARYKRLIGED--VLF---ITGTDEHGQKIQRTAEEKGL--L 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
D I + + K + + T PR H + + + +G Y A +
Sbjct: 73 PQDHCDQIVASFEALWQKLDIQYDRFSRTTAPR---HQAIVKEFFERVWDNGDIYLAQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + ++ + F L K + +E +++
Sbjct: 130 GWYCVQCEEFKEKRELLEDGCCPLHPNKKAEWRDEENYFFKLSKYQSKLEELYKNNPQFI 189
Query: 212 RP 213
P
Sbjct: 190 EP 191
>gi|163795498|ref|ZP_02189464.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
gi|159179097|gb|EDP63630.1| Methionyl-tRNA synthetase, class Ia [alpha proteobacterium BAL199]
Length = 515
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/184 (17%), Positives = 57/184 (30%), Gaps = 16/184 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D L R R + V +T D+ K+ A
Sbjct: 14 VNDKPHIGHAYTTLACDALARFKRLDGYD-----VMFLTGTDEHGQKVEAAADAAGVD-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T + +Q F + C H+ + L + + GH Y +
Sbjct: 67 ----PQSFTDRVSQNFRDLIGVMNCSTDDFIRTTEPRHVTAVQALWRRLKEKGHIYLGSY 122
Query: 151 -EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ E++ + P ++ ++ F L K P+ +E+
Sbjct: 123 AGWYSVRDEAFYVETELTTVNGEKRAPSGAPVEWVEEPSYFFDLSKWQEPLLAFYEANPD 182
Query: 210 RGRP 213
P
Sbjct: 183 FIAP 186
>gi|73668089|ref|YP_304104.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
gi|121729563|sp|Q46F18|SYM_METBF RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|72395251|gb|AAZ69524.1| methionyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
Length = 710
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 48/169 (28%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + D+ R LR + VT+V D I+ A
Sbjct: 12 TCGL-PYANGKAHIGHLRTYVPADIYARSLRKEG--RDVTFVCG----SDTHGTPIVVNA 64
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
+ + + + F + +L + + + ++ +I
Sbjct: 65 EE------LGITPKELVEVYHKHFDETFKQLGVYFDAFGTTDDPENHNRTLDIVNRLIEK 118
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y EI + ++ +
Sbjct: 119 GYVYPKTIEIAYCPKCNRFLPDRYVEGSCPHCGEIARGDECDQGCGKHL 167
>gi|186680640|ref|YP_001863836.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
gi|186463092|gb|ACC78893.1| methionyl-tRNA synthetase [Nostoc punctiforme PCC 73102]
Length = 534
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 58/182 (31%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I DV+ R R + + IT D+ KI +R+ +
Sbjct: 20 VNDVPHIGSAYTTIAADVVARFHRLLGHQVLL-----ITGTDEHGQKI-QRSAES-LGKA 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + + + T PR H + + + G Y+ +
Sbjct: 73 PQEFCDEVVPSFISLWQLLDIKYDRFSRTTAPR---HEAIVKEFFERVWESGDIYQGQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + + T ++ + F L K + ++S
Sbjct: 130 GWYCVSCEEFKEERDLLEGHRCPIHTNKEVEWRDEQNYFFRLSKYQNKLTEFYQSKPNFI 189
Query: 212 RP 213
+P
Sbjct: 190 QP 191
>gi|255022653|ref|ZP_05294639.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL J1-208]
Length = 619
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|148285047|ref|YP_001249137.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
gi|146740486|emb|CAM81042.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
Length = 511
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 58/183 (31%), Gaps = 11/183 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A I+ DV R +R K V ++ TD + E +
Sbjct: 14 VNDIPHIGHAYTSILADVYARFMRLLG--KEVIFLTG-TD-----EHGQKVEKAASNAGV 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K FVK + L T HI + L + G Y
Sbjct: 66 SPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTRHIKAVQKLWNILKQQGDIYLGKYCGW 125
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ Y + K T ++ +++ F L K + +E+ +P
Sbjct: 126 YAIKDEAFYSESELTT--DGKAPTGAEVEWVEESSYFFALSKWQQKLLDWYENNHDIIKP 183
Query: 214 GWH 216
+
Sbjct: 184 AFF 186
>gi|221055079|ref|XP_002258678.1| trna ligase [Plasmodium knowlesi strain H]
gi|193808748|emb|CAQ39450.1| trna ligase, putative [Plasmodium knowlesi strain H]
Length = 727
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 28/187 (14%), Positives = 69/187 (36%), Gaps = 14/187 (7%)
Query: 35 VY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
VY D HIG+A ++ D++ R ++ Y E V + +D+ KI +++
Sbjct: 150 VYYANDKPHIGHAYCNVLSDIICRFAKWEYTEGRRKRVILFSGMDEHGLKIERKSK--KL 207
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
IP + I+ ++S K + ++ + H + + + + +G+ Y+
Sbjct: 208 KIPSMEYINNMSSYYQMMNDKLHVHVNI---FYRTTSQFHKSFVQQVWKYLTQNGYIYKG 264
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+D + F ++ ++ E+ + + K + ++
Sbjct: 265 TYRGYYDVNEEKYLNEFELKQKEKNDPNILYIEEENSYFFN---ILKFKKFLTDFYQRSD 321
Query: 209 GRGRPGW 215
P +
Sbjct: 322 ELIYPSY 328
>gi|189025869|ref|YP_001933641.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|189018444|gb|ACD71062.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
Length = 528
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
Y C G T HIGN R +I D++ R LR K V +V
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDQG--KSVRFV 68
>gi|58698674|ref|ZP_00373565.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225630227|ref|YP_002727018.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
gi|58534805|gb|EAL58913.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|225592208|gb|ACN95227.1| Methionyl-tRNA synthetase [Wolbachia sp. wRi]
Length = 548
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 49/163 (30%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLLCDVVARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKAK----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EA 148
T + F + + H +I L + G Y
Sbjct: 66 -EMQPKEFTDDVSVSFKELAKFMNFEYDDFIRTTEERHKKAVIALWNRLEERGQIYLDSY 124
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + K + E+ + +++
Sbjct: 125 SGWYSVRDEAFYQESELIDGKAPTGAEVQWIKEESYFFRLSNW 167
>gi|15639631|ref|NP_219081.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|8928369|sp|O83650|SYK_TREPA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|3322943|gb|AAC65618.1| lysyl-tRNA synthetase (lysS-1) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|291060014|gb|ADD72749.1| lysyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 528
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
Y C G T HIGN R +I D++ R LR K V +V
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDQG--KSVRFV 68
>gi|51473863|ref|YP_067620.1| methionyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
gi|81826289|sp|Q68W54|SYM_RICTY RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|51460175|gb|AAU04138.1| MetRS [Rickettsia typhi str. Wilmington]
Length = 507
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/131 (22%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D +HIG+A + DV+ R +R K V ++ TD + E +I N
Sbjct: 14 VNDVSHIGHAYTSVASDVIARFMRCCG--KDVMFLTG-TD-----EHGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
T K +Q F + N H + Q ++ +G YE E
Sbjct: 66 DPQSFTDKTSQNFRDLMVAMNISNDDFIRTTENRHKKAVAVFWQKLLDNGAIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YSVRDEAFYDE 136
>gi|207110316|ref|ZP_03244478.1| cysteinyl-tRNA synthetase [Helicobacter pylori HPKX_438_CA4C1]
Length = 41
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 6/38 (15%)
Query: 422 MKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
K F AD IR++L + L D + T W++
Sbjct: 8 KKDFLKADRIREELLKQKIALMDT------PQGTIWEK 39
>gi|320536840|ref|ZP_08036835.1| lysyl-tRNA synthetase [Treponema phagedenis F0421]
gi|320146299|gb|EFW37920.1| lysyl-tRNA synthetase [Treponema phagedenis F0421]
Length = 528
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
Y C G T HIGN R +I D++ R LR K V ++
Sbjct: 28 YTCASGITPSGTVHIGNFREIISVDLVVRALRDRG--KNVRFI 68
>gi|157804069|ref|YP_001492618.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
gi|157785332|gb|ABV73833.1| methionyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
Length = 510
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V + HIG+A +V DV+ R +R E V + TD + E +I N
Sbjct: 14 VNNVPHIGHAYTSVVSDVIARFMRLCGFE--VILLTG-TD-----EHGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + N H + Q ++ +G Y+ E
Sbjct: 66 DPQQFTDQISENFRHLMTSMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYKGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|329929628|ref|ZP_08283327.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328936005|gb|EGG32459.1| methionine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 662
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 39/154 (25%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V Y +T D+ KI +A + +
Sbjct: 18 DKLHIGHAYTTVAGDAMARYKRLRGYD--VRY---LTGTDEHGQKIERKAAEAGKT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+L H + + + ++ Y+
Sbjct: 69 --PQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQEVFERLLKQDDIYKGEYEG 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + + ++
Sbjct: 127 WYCTPCESFFLERQLVNGNCPDCGRPVELVKEES 160
>gi|239980679|ref|ZP_04703203.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
gi|291452539|ref|ZP_06591929.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
gi|291355488|gb|EFE82390.1| methionyl-tRNA synthetase [Streptomyces albus J1074]
Length = 538
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A S
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTADANGVSPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + ++ + + + H ++ +Q++ G Y
Sbjct: 78 --EWCDKLVTEAWKPLWEHLEIAN--DDFIRTTEKRHTDRVQEFVQDLWDKGEIY 128
>gi|257457329|ref|ZP_05622500.1| lysyl-tRNA synthetase [Treponema vincentii ATCC 35580]
gi|257445251|gb|EEV20323.1| lysyl-tRNA synthetase [Treponema vincentii ATCC 35580]
Length = 533
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
Y C G T HIGN R +I D++ R LR K V ++
Sbjct: 31 YTCASGITPSGTVHIGNFREIISVDLVVRALRDRG--KKVRFI 71
>gi|46580460|ref|YP_011268.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|46449879|gb|AAS96528.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str.
Hildenborough]
gi|311234204|gb|ADP87058.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 663
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 61/416 (14%), Positives = 105/416 (25%), Gaps = 68/416 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D + R R + +T D DKI++ A + S
Sbjct: 13 VNAKPHLGHAYTTIVADSMRRFQRLLGKDTYF-----LTGTDEHGDKIVQAAEKAGVSPK 67
Query: 92 INDA---------------------------ISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+ Q+ H
Sbjct: 68 DFVDGVSGQFRDLWPHLGVEYDQFIRTTDPEHKKVVQAFLQRVYDSGDIYFGEYGGHYCY 127
Query: 125 ATNHIPQMIYLIQNIILHGHA---YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
L + Y A F S + + R
Sbjct: 128 GCERFYTEKELENGLCPQHQVKPEYIAEKNYFFRMSKYQGWLKQHILDNPDFIRPERYRN 187
Query: 182 KY----HKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMSSHYLGK----- 229
+ D + + + + G E P+ + + +S+
Sbjct: 188 EVLSMLDSGALEDLCISRPKSRLTWGIELPFDTDYVCYVWFDALLNYVSALGWPDGDRFA 247
Query: 230 ---VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
H D++ PH A +E N+ +H + KMSKS GN +
Sbjct: 248 NYWPGVQHLVAKDILKPHAVFWPTMLKAA-GLEPYNNLNVHGY-WLVRDTKMSKSLGNVV 305
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSK-WPQTST 342
+ E+++ + + E + L S+ T+
Sbjct: 306 SPLEMIDRYGLNAFRYFLLREMHFGSDASFSEEALVGRLNADLANDLGNLYSRVLSMTAK 365
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQA--------LHKLARESTKNHDLLPIFNASAH 390
G + PA + D T+ A+ A L R S L + A
Sbjct: 366 YFGGVVPAPGAYTEED-ETLRALAAEAQRNFCNLFGRVRFSNALESLWELVRALNK 420
>gi|268324999|emb|CBH38587.1| putitive methionyl-tRNA synthetase, partial sequence [uncultured
archaeon]
Length = 539
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 48/164 (29%), Gaps = 17/164 (10%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHP 88
P V HIG+ R + D+ R+LR + V ++ D I+ A E
Sbjct: 16 PYVNGECHIGHLRTYVPADIYVRMLRKMGHD--VIFISG----SDTHGTPIVLSAEAEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP-QMIYLIQNIILHGHAYE 147
A + ++ F + L + + + +++ +I G+ Y
Sbjct: 70 ------APEAVVARFHDHFKRIFKALNVDFDYYGQTNSECNHKRTGEIVKKLIDSGYVYM 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ F + + ++ +
Sbjct: 124 EETKQAFCDTCGRFLPDRYVEGECPYCGASARGDECDQGCGKHL 167
>gi|228988288|ref|ZP_04148383.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|228771460|gb|EEM19931.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 544
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|220931388|ref|YP_002508296.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|254782868|sp|B8D274|SYM_HALOH RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|219992698|gb|ACL69301.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 540
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 30/191 (15%), Positives = 62/191 (32%), Gaps = 17/191 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV D I RA++E ++
Sbjct: 17 HLGHIASLLPGDILARYFRLKG--EKVLYVSG----SDCHGTPIALRAKREG------ES 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
II + Q+F K T+L + H + +I+ + G+ Y+ + ++
Sbjct: 65 PRIIAERYHQEFKKTFTKLGFSYDNYTKTDNPFHHQVVQSIIKKLFEKGYIYKKQTKQLY 124
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ I ++ + + SP +
Sbjct: 125 CSKCQQFLPDRYVEGICPVCGKVVRGDQCDYCSSLIEPTDLEEKRCKICGSSPVIKNTEH 184
Query: 215 WHIECSAMSSH 225
+++ S S
Sbjct: 185 FYLALSEFSDE 195
>gi|239948424|ref|ZP_04700177.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|241563440|ref|XP_002401705.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
gi|215501897|gb|EEC11391.1| methionyl-tRNA synthetase, putative [Ixodes scapularis]
gi|239922700|gb|EER22724.1| methionyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 508
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 45/131 (34%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V +T D+ + E +I N
Sbjct: 14 VNDVPHIGHAYTSVASDVIARFMRLRSFD-----VMFLTGTDE---HGQKVEKAAINKNI 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEII 153
T + ++ F T + N H + Q ++ +G YE E
Sbjct: 66 DPQKFTDQTSESFRHLMTAMHISNDDFIRTTENRHKEAVAVFWQKLLDNGTIYEGFYEGW 125
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 126 YAVRDEAFYDE 136
>gi|138893709|ref|YP_001124162.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
thermodenitrificans NG80-2]
gi|134265222|gb|ABO65417.1| Methionine-tRNA ligase/methionyl-tRNA synthetase [Geobacillus
thermodenitrificans NG80-2]
Length = 650
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D L R R + V +T D+ KI +A ++ +
Sbjct: 17 DKLHIGHAYTTVAGDTLARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + ++ + + E
Sbjct: 70 QYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQ 173
S +
Sbjct: 129 TPCESFYTERQLVDGNCPDC 148
>gi|332297228|ref|YP_004439150.1| Lysyl-tRNA synthetase [Treponema brennaborense DSM 12168]
gi|332180331|gb|AEE16019.1| Lysyl-tRNA synthetase [Treponema brennaborense DSM 12168]
Length = 534
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 28 MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
+Y C G T HIGN R +I D++ R LR K V ++
Sbjct: 30 VYTCASGITPSGTVHIGNFREIISVDLVVRALRDRG--KNVRFI 71
>gi|291277617|ref|YP_003517389.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
gi|290964811|emb|CBG40667.1| methionyl-tRNA synthetase [Helicobacter mustelae 12198]
Length = 639
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 52/185 (28%), Gaps = 22/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D+L + E + +T D+ KI + A+++H
Sbjct: 12 VNDVPHIGHAYTNILADMLKKYYTLLGEETFL-----LTGTDEHGQKIEQSAQKKH---- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+ +Q+F +HI + + G Y+
Sbjct: 63 --QTPKAYADQISQEFRNLWDYFGIDYDHFVRTTDASHIKGVQEAFSKMYQKGDIYKGEY 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + T + ++ F L K W
Sbjct: 121 EGNYCISCESFFAPSQLLDGKCPDCGRNTNLIKEES----YFFALSK-YQDKLLQWYEKS 175
Query: 209 GRGRP 213
P
Sbjct: 176 DCIFP 180
>gi|189183674|ref|YP_001937459.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
gi|189180445|dbj|BAG40225.1| methionyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
Length = 511
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 35/183 (19%), Positives = 59/183 (32%), Gaps = 11/183 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A I+ DV R +R K V ++ TD + E +
Sbjct: 14 VNDIPHIGHAYTSILADVYARFMRLLG--KEVIFLTG-TD-----EHGQKVEKAASNAGV 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K FVK + L T HI + L + + G Y
Sbjct: 66 SPKEFVDKIASSFVKLSVDLNLSNDDFIRTTDTKHIKAVQKLWKVLEQQGDIYLGKYCGW 125
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ Y + K T ++ +++ F L K + +E+ +P
Sbjct: 126 YAIKDEAFYSESELTT--DGKAPTGAEVEWVEESSYFFALSKWQQKLLDWYENNHDIIKP 183
Query: 214 GWH 216
+
Sbjct: 184 AFF 186
>gi|88604058|ref|YP_504236.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|88189520|gb|ABD42517.1| methionyl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 690
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 28/192 (14%), Positives = 47/192 (24%), Gaps = 36/192 (18%)
Query: 27 RMY---------VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
+MY CG Y H+G+ R + D R +R E V ++
Sbjct: 23 KMYLMNSRPLLVTCGL-PYTNGPCHLGHLRTYVPADFYVRFMRRKGEE--VVFICG---- 75
Query: 76 DD----KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
D I+ A +E + I+ + F T +H
Sbjct: 76 SDNHGTPIVVSAEKEGTT------PRQISERYHTHF--------SDTFTKMQVHFDHFGM 121
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + I +K + + K D
Sbjct: 122 TDDPTTHARTKHLVSRLIDRGYVYPKVIQQAYCIHCQKFLPDRYLEGICPHCKKPARGDE 181
Query: 192 ILWKRSTPMEPG 203
+EPG
Sbjct: 182 CDQGCGKHLEPG 193
>gi|319407220|emb|CBI80859.1| Methionyl-tRNA synthetase [Bartonella sp. 1-1C]
Length = 513
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 45/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A IV D L R + K V ++ TD + + + +N
Sbjct: 16 SAPHIGHAYNAIVSDTLARFQKADG--KNVFFLSG-TD-----EHGLKMQQTAEMLNITP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K L C H L + + G Y +
Sbjct: 68 QQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGCYAGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y E + + N + ++
Sbjct: 128 VRQESYYEEKDTEIDQEGIRREKELGSPVEWNEEESYFFR 167
>gi|196250752|ref|ZP_03149439.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
gi|196209702|gb|EDY04474.1| methionyl-tRNA synthetase [Geobacillus sp. G11MC16]
Length = 650
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 22/140 (15%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D L R R + V +T D+ KI +A ++ +
Sbjct: 17 DKLHIGHAYTTVAGDTLARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + ++ + + E
Sbjct: 70 QYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQ 173
S +
Sbjct: 129 TPCESFYTERQLVDGNCPDC 148
>gi|261405922|ref|YP_003242163.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261282385|gb|ACX64356.1| methionyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 662
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 39/154 (25%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V Y +T D+ KI +A + +
Sbjct: 18 DKLHIGHAYTTVAGDAMARYKRLRGYD--VRY---LTGTDEHGQKIERKAAEAGKT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+L H + + + ++ Y+
Sbjct: 69 --PQQFVDDIVAGIKDLWKKLDISNEDFIRTTEKRHTTVVQDVFERLLKQDDIYKGEYEG 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + + ++
Sbjct: 127 WYCTPCESFFLERQLVNGNCPDCGRPVELVKEES 160
>gi|220904688|ref|YP_002480000.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
gi|219868987|gb|ACL49322.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. ATCC 27774]
Length = 670
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 46/342 (13%), Positives = 89/342 (26%), Gaps = 66/342 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A +V D + R + + + +T D DKI++ A +E S
Sbjct: 13 VNARPHLGHAYTTVVADAMARY--HKLAGQDTLF---LTGTDEHGDKIVQAAEKEGKSPK 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + I+++ + + T P + + + + +
Sbjct: 68 --EFVDGISARFQALWPRLDVANDRFVRTTDPAHVASVQSFLQKVYDAGDIYFGEFGGHY 125
Query: 152 II-FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP--- 207
+ K + Y + K P + P
Sbjct: 126 CYGCERFYTEKELENGLCPQHLSKPEFISEKNYFFRMSKYLPWLKEHIEQNPTFIRPERY 185
Query: 208 -------------------WGRGRPGWHIECSA-----------------------MSSH 225
+ R W IE +
Sbjct: 186 RTEVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALINYISALGWPDGAD 245
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
+ H D++ PH A +G+ + KMSKS GN
Sbjct: 246 FERYWPGEHLVAKDILKPHAVFWPTMLKSAG--LPQYRHLNVHGYWLVRDTKMSKSLGNV 303
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQR 326
+ E+ + + A R +L H+ F+ +
Sbjct: 304 VEPEEM-------AQRFGADAFRYFLLREMHFGSDASFSDEA 338
>gi|302341677|ref|YP_003806206.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
gi|301638290|gb|ADK83612.1| methionyl-tRNA synthetase [Desulfarculus baarsii DSM 2075]
Length = 656
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 40/156 (25%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV DV R + + T D DKI E A + S
Sbjct: 14 VNAEPHLGHAYTTIVADVARRF--HLLLGQTARMQ---TGTDEHGDKIAEAAAKNGLS-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ + F L HI + L+Q + G Y
Sbjct: 67 ----PRQYADRVSGLFRDLWPHLHIQYDRFVRTTDPQHIQTVRALLQKVHDQGDIYFAKY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
K + E+ +
Sbjct: 123 GGNYCVACERFLTDKELVEGKCPDHHTEPVYIEEEN 158
>gi|13470650|ref|NP_102219.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
gi|25009388|sp|Q98MV8|SYM_RHILO RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|14021392|dbj|BAB48005.1| methionyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
Length = 516
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 41/401 (10%), Positives = 98/401 (24%), Gaps = 35/401 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D L R R K V + +T D+ K+ + A +E +
Sbjct: 19 PHIGHAYTVIATDALARFQRLDG--KDVFF---LTGTDEHGLKMQQTAEKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F T + + H + + + +G Y +
Sbjct: 68 PQALADRNSAIFRSMTEAVGGSNDEYIRTTEPRHYASCQAIWKAMAANGDIYLDRYSGWY 127
Query: 155 DTSSIPNYGS------------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-E 201
+ E + L++
Sbjct: 128 SVRQEAYFDESETTLGEDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQPDFVG 187
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
P ++ ++S + G +++ + A +
Sbjct: 188 PAERRNEVMSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAGYPDTK 247
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
++ W + ++ G+ + + + + + + R + +
Sbjct: 248 SDQWRYWPATHIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKMSKSVGNV 307
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
L E L S T + +
Sbjct: 308 VDPFALIEHYGLDQVRYFFLREVPFGQDGSYSHDAIVNRTNADLAN-----GLGNLAQRS 362
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
L + + G+ + + S +++ V K
Sbjct: 363 LSMIAKNCG--GVVPKRGEMTDADSAILDQAVAALTTARKA 401
>gi|320352452|ref|YP_004193791.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
gi|320120954|gb|ADW16500.1| methionyl-tRNA synthetase [Desulfobulbus propionicus DSM 2032]
Length = 648
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 58/420 (13%), Positives = 105/420 (25%), Gaps = 71/420 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V H+G+A IV D R R V + TD + + +
Sbjct: 12 VNALPHLGHAYTTIVTDTYSRFRRLCG--DTVRFQTG-TD-----EHGEKIAEAAAKAGE 63
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTH-------QPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + F LA R I Q ++ +I ++
Sbjct: 64 SPREYVDRISAAFKDTWPVLAIQPDKIIRTTDADHVRTVQAILQQVHASGDIYFSEYSGL 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ + E K T + D+++ P + +P
Sbjct: 124 YCKGCERFLTEKELVDGKCPDHLVEPKAITEQNYFFRMSKYQDWLIE--HIQRHPDFITP 181
Query: 208 WGR-----GRPGWHIECSAMSSHYLGKVFDI----------------------------- 233
+E +S + I
Sbjct: 182 ERYRNEVLSFLSEPLEDLCISRPTSRLTWGIPLPFDQNFVTYVWFDALINYLTGIGYPDS 241
Query: 234 -----------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
H D++ PH A +E + +H N++ KMSKS
Sbjct: 242 PEFAMYWAEAEHVIAKDILKPHAIYWPTMLR-AMGLEPYRRLHVHGY-WNVDATKMSKSL 299
Query: 283 GNFITINELLETKKFGGRSW-------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
GN + EL+ET + + R D L+
Sbjct: 300 GNVVRPRELVETYGVDTVRYFVLREMSFGLDSSFSSDAILARHNADLANDLGNLFSRSLT 359
Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIE 395
+ + + D +SAI A+ +E+ A ++G+
Sbjct: 360 MIDKYAAGRVPEPETAALFAPEDRELMSAIAAMFDHYQENMAAFTFHKALQAIWEVIGLL 419
>gi|229032677|ref|ZP_04188640.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
gi|228728676|gb|EEL79689.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1271]
Length = 544
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 48/167 (28%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|58579479|ref|YP_197691.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|58418105|emb|CAI27309.1| Methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
Length = 506
Score = 48.2 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 51/324 (15%), Positives = 87/324 (26%), Gaps = 69/324 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ ++ D++ R R V + IT D+ KI + A +
Sbjct: 13 VNDVPHIGHVYTTLISDIIARFKRLDGY--NVKF---ITGTDEHGQKIEKAAAK------ 61
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N ++ T + F T + H + L + + +G Y N
Sbjct: 62 ANKSLVEFTDHASAIFQHLTGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNY 121
Query: 151 EIIFDTSSIPNYGSFSRRK----------------IDEQKMGTRVPEKYHKKNPADFILW 194
+ Y + + +FI+
Sbjct: 122 AGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHPNFIIP 181
Query: 195 KRSTPMEPGW------ESPWGRGRPGWHIECSAMSSHYL--------------------- 227
K + + R W I +H +
Sbjct: 182 KHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEINS 241
Query: 228 ---------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+H G D++ H A A + +G+ EG+K+
Sbjct: 242 SEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAA--ELPLPKQILAHGWWTNEGQKI 299
Query: 279 SKSNGNFITINELLETKKFGGRSW 302
SKS GN I EL+E +
Sbjct: 300 SKSLGNVINPFELIEEFGVDQVRY 323
>gi|220913018|ref|YP_002488327.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
gi|219859896|gb|ACL40238.1| methionyl-tRNA synthetase [Arthrobacter chlorophenolicus A6]
Length = 519
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 49/161 (30%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V +T D+ KI + A +E +
Sbjct: 22 PHIGHAYEYIATDAMARFKRLDGYD-----VMFLTGTDEHGMKIAQTAEKEGIT------ 70
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N + + L +H + + + +G Y E +
Sbjct: 71 PKELVDRNAEIYKAAHEALGITYDRFIRTTDEDHYAASQAIWKKMEANGDIYLDKYEGWY 130
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
YG D+ ++ + + ++
Sbjct: 131 SVRDEAFYGEDETVVKDDGVRYSKETDTEVTWTAEESYFFR 171
>gi|147801914|emb|CAN70624.1| hypothetical protein VITISV_028586 [Vitis vinifera]
Length = 318
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 7/46 (15%), Positives = 20/46 (43%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
+ ++ ++ L +R + ++ AD + ++ G+ LE
Sbjct: 154 DPRESASVPGELQILAVQRAKARSERNYAKADALHDKIIDAGYRLE 199
>gi|108801230|ref|YP_641427.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119870381|ref|YP_940333.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
gi|126437210|ref|YP_001072901.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
gi|108771649|gb|ABG10371.1| methionyl-tRNA synthetase [Mycobacterium sp. MCS]
gi|119696470|gb|ABL93543.1| methionyl-tRNA synthetase [Mycobacterium sp. KMS]
gi|126237010|gb|ABO00411.1| methionyl-tRNA synthetase [Mycobacterium sp. JLS]
Length = 515
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 45/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
H+G+A I D + R R + V Y+ TD+ + + + +
Sbjct: 16 GDPHVGHAYEYIATDAIARFKRLDGYD--VRYLTG-TDV-----HGQKMAETATALGVPV 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +N+ F + +L + T+H + Q + G Y +
Sbjct: 68 ADLARRNSDVFQRLQEKLNISFDRFIRTSDTDHYRASEDIWQRMNAAGDIYLDAYSGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ ++ +K
Sbjct: 128 VRDERFFTEGETTLREDGVRIATETGAPLTWTEEQTYFFK 167
>gi|42784223|ref|NP_981470.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|68565988|sp|Q72Y44|SYM1_BACC1 RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|42740154|gb|AAS44078.1| methionyl-tRNA synthetase, putative [Bacillus cereus ATCC 10987]
Length = 544
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRNLGFTYDCYTRTDSEHHHKTVQKVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|326778239|ref|ZP_08237504.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326658572|gb|EGE43418.1| methionyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 537
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A + +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANNVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ G Y
Sbjct: 78 A--WCDKLVEEAWKPLWEHLDIAN--DDFIRTTEKRHTDRVQEFVQDLYDKGEIY 128
>gi|325963761|ref|YP_004241667.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469848|gb|ADX73533.1| methionyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 520
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 50/161 (31%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V +T D+ KI + A +E +
Sbjct: 22 PHIGHAYEYIATDAMARFKRLDGYD-----VMFLTGTDEHGMKIAQTAEKEGIT------ 70
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N + + L +H + + + +G Y + E +
Sbjct: 71 PKELVDRNAEVYKAAHAALGITYDRFIRTTDADHYAASQAIWKKMEANGDIYLSKYEGWY 130
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
YG D+ ++ + + ++
Sbjct: 131 SVRDEAFYGEDDTVVKDDGVRYSKETDTEVTWTAEESYFFR 171
>gi|282863863|ref|ZP_06272921.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
gi|282561564|gb|EFB67108.1| methionyl-tRNA synthetase [Streptomyces sp. ACTE]
Length = 534
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANDVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ Y
Sbjct: 78 A--WCDKLVEEAWKPLWEHLNIAN--DDFIRTTEKRHTDRVQEFVQDLYDKDQIY 128
>gi|302552805|ref|ZP_07305147.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
40736]
gi|302470423|gb|EFL33516.1| methionyl-tRNA synthetase [Streptomyces viridochromogenes DSM
40736]
Length = 538
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A S
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANGVSPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + ++ + + + H ++ +Q++ G Y
Sbjct: 78 --EWADKLVTEAWKPLWEHLEIAN--DDFIRTTQKRHTDRVQEFVQDLYDKGEIY 128
>gi|309390254|gb|ADO78134.1| methionyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 653
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 23/165 (13%), Positives = 51/165 (30%), Gaps = 14/165 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R + + +T D+ KI +A+
Sbjct: 17 DKLHIGHAYTTVAADTIARYKKMRGFDT-----MFLTGSDEHGQKIERKAQAAGKE--AK 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + I + + K + H + + + + G Y+ E
Sbjct: 70 EYVDQIVATFKNLWDKLDIEY---DYFIRTTEARHEKVVQQIFEKLYDQGDIYKGKYEGW 126
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ T + + E+K+ + + + +K S
Sbjct: 127 YCTPCEAFWTERQLEEAKEEKVCPD-CHREVEWVEEESYFFKMSK 170
>gi|320009832|gb|ADW04682.1| methionyl-tRNA synthetase [Streptomyces flavogriseus ATCC 33331]
Length = 537
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A + +
Sbjct: 26 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANNVTPQ 80
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ Y
Sbjct: 81 A--WCDKLVEEAWKPLWEHLNIAN--DDFIRTTEKRHTDRVQEFVQDLFDKDQIY 131
>gi|229199184|ref|ZP_04325865.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
gi|228584290|gb|EEK42427.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1293]
Length = 544
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETIQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|288574650|ref|ZP_06393007.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
gi|288570391|gb|EFC91948.1| methionyl-tRNA synthetase [Dethiosulfovibrio peptidovorans DSM
11002]
Length = 646
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 67/460 (14%), Positives = 116/460 (25%), Gaps = 105/460 (22%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I DV+ R R V + +T D+ KI E A+ + +
Sbjct: 16 VNDVPHIGHAYTTIGADVMSRYKRMDGY--KVFF---LTGTDEHGQKIYESAKAKGMTA- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+T + + F + L H + + ++ G Y+
Sbjct: 70 -----QELTDEMAENFKRLLPVLNISNDDFIRTTEKRHERVVQSIFSKLMDQGDIYKGTY 124
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPM---- 200
+ S V + L K
Sbjct: 125 KGLYCVPCETYVPESSMGENNTCPDCGRPLVEMEEESYFFKTSRYADRLLKYYEDNPKAI 184
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP----------------H 244
P + ++S + + G +I+
Sbjct: 185 MPKTRYNEIVSFIKSGLRDQSVSRTSISWGIPVPGDEKHVIYVWFDALINYLTACGYEDD 244
Query: 245 HENEIAQSCCADR--IEKTANIWIH-------------------NGFLNLEGRKMSKSNG 283
E A A + +G+ +EG KMSKS G
Sbjct: 245 PEKLAAFWPNAHHLMAKDIIRFHCVIWPIMVMALGLNPPVGVFSHGWWTMEGEKMSKSKG 304
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAML-MTHYREPIDFTVQRLTEAEILL-------- 334
N + E+++ + A R +L + DF+ + +
Sbjct: 305 NVVDPFEMVDL-------YGADAFRYFLLRQVPFGMDGDFSEAAMAQRINSDLANDLGNL 357
Query: 335 ---------SKWPQTSTSKGIIDPAVLS-------------ALYNDLNTVSAIQALHKLA 372
S + P + +D A++A L
Sbjct: 358 LSRTVSMVLKYRDGIVPSPSDLSPLDIELSEVARKALDTYREKMDDFTFDEALKAAWGLI 417
Query: 373 RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
+ K D LG E KE L+ + +E L
Sbjct: 418 GRANKYID-----ETMPWKLGNEGSKEPLDAVLWGLVESL 452
>gi|311070685|ref|YP_003975608.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
gi|310871202|gb|ADP34677.1| methionyl-tRNA synthetase [Bacillus atrophaeus 1942]
Length = 664
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A +E N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEEE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L + H + + Q + +G Y E +
Sbjct: 71 QEYVDRAAADIQKLWKQLEISNDDFIRTTESRHKVVIEKVFQKLFDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ + G V
Sbjct: 131 IPDETFYTETQLVDIERNEKGEVV 154
>gi|298492533|ref|YP_003722710.1| lysyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298234451|gb|ADI65587.1| lysyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 527
Score = 47.8 bits (112), Expect = 0.003, Method: Composition-based stats.
Identities = 63/355 (17%), Positives = 117/355 (32%), Gaps = 39/355 (10%)
Query: 34 TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIP 91
T H+G+ R +++ DV+YR L++ K V ++ + D D D + + QE +
Sbjct: 22 TPSGRVHVGSLRGVVIHDVIYRALKHA--RKPVKFLYGVDDYDALDTVPKYLEQETFAPY 79
Query: 92 INDAI----------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
+ I S +F + L T+ R ++ I +
Sbjct: 80 LGFPICNVPSPAEGASDYAKYFIGEFFEVFEYLGIKPETYFLRDLYRSGKLNSHIDTFLK 139
Query: 142 HGHAYEANNEIIFDTSS------IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ H + + + E ++ NP K
Sbjct: 140 NAHLVREVYKEVSKADRPNNWYPFQVVCENCGKIATTVTTDYNGSEVFYTCNPDATNYTK 199
Query: 196 RSTPMEPGWESPW-GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
GW SP+ G G+ W +E + + I G D ++A +
Sbjct: 200 GC--GHSGWVSPFNGNGKLPWKVE---WVAKWDVVGVTIEMAGKDHSQKGGSRDVANAIS 254
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
++K F+ + G KMS S G + E+ P ++R ML T
Sbjct: 255 RKVLQKQPPFHSPYEFILVNGTKMSSSKGVGSSAKEIAALL-------PPELLRFLMLRT 307
Query: 315 HYREPIDFTVQ------RLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
R I+F + + L++K+ + + P + L +D+ T
Sbjct: 308 QPRTVINFVPNYETITRLFRDYDTLINKYSNSPELTEELMPLFYAQLGDDIQTFQ 362
>gi|57239498|ref|YP_180634.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|57161577|emb|CAH58505.1| methionyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
Length = 506
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 50/324 (15%), Positives = 86/324 (26%), Gaps = 69/324 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ ++ D++ R R V + IT D+ KI + A +
Sbjct: 13 VNDVPHIGHVYTTLISDIIARFKRLDGY--NVKF---ITGTDEHGQKIEKAAAK------ 61
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N ++ T + F + H + L + + +G Y N
Sbjct: 62 ANKSLVEFTDHASAIFQHLAGVMNFSHDDFIRTTEIRHKKAVTGLWRRLYNYGKIYLGNY 121
Query: 151 EIIFDTSSIPNYGSFSRRK----------------IDEQKMGTRVPEKYHKKNPADFILW 194
+ Y + + +FI+
Sbjct: 122 AGWYAVRDETFYQEKELIDGKAPTGAEVEWVEEPSYFFRLSHFQERLLDFYDKHPNFIIP 181
Query: 195 KRSTPMEPGW------ESPWGRGRPGWHIECSAMSSHYL--------------------- 227
K + + R W I +H +
Sbjct: 182 KHRYNEVISFVKSGLKDISISRQNISWGISVPEDDNHIIYVWIDALTNYLTTLGFPEINS 241
Query: 228 ---------GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
+H G D++ H A A + +G+ EG+K+
Sbjct: 242 SEYKNYWVDENSTVVHVVGKDILRFHAVYWPAILMAA--ELPLPKQILAHGWWTNEGQKI 299
Query: 279 SKSNGNFITINELLETKKFGGRSW 302
SKS GN I EL+E +
Sbjct: 300 SKSLGNVINPFELIEEFGVDQVRY 323
>gi|117927385|ref|YP_871936.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
gi|117647848|gb|ABK51950.1| methionyl-tRNA synthetase [Acidothermus cellulolyticus 11B]
Length = 539
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 23/107 (21%), Positives = 41/107 (38%), Gaps = 9/107 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + V + +T D+ K++ R+ Q + P
Sbjct: 14 VNDAPHIGHAYTTVAADVLARWHRQRG--EPVWF---LTGTDEHGQKVL-RSAQAGGASP 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
A ++ + + T +PR T + + +
Sbjct: 68 QEWADRLVAEAWQPTWRELDISYDDFIRTTEPRHTGRVQAFLQRLYE 114
>gi|109947187|ref|YP_664415.1| methionyl-tRNA synthetase [Helicobacter acinonychis str. Sheeba]
gi|109714408|emb|CAJ99416.1| metS [Helicobacter acinonychis str. Sheeba]
Length = 643
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 58/452 (12%), Positives = 120/452 (26%), Gaps = 90/452 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + A+ + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSAKLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAY 146
D+IS I F D + + ++++ + +
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTYSGYYCV 127
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ + N + E + + +L + E
Sbjct: 128 SCESYCAISKADNINNKVLCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNPEVILPI 187
Query: 207 PWGRGRPGWHIE---------------------------------------------CSA 221
+ + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGILLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKM 278
+ + + H G D++ H A A + +G+ +EG KM
Sbjct: 248 LENKMVHFECARHIVGKDILRFH-----AIYWPAFLMSLGLPLFKQLCVHGWWTIEGVKM 302
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKW 337
SKS GN + +L + +R +L + + DF+ + L E
Sbjct: 303 SKSLGNVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNN 355
Query: 338 PQTST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
+ L + ++ +H++ + + + A +
Sbjct: 356 DLGNLLNRLLGMAKKYFNYSLKSEKITTYYPKELEKVHQILDNANSFVPKMQLHKALEEL 415
Query: 392 LG-------IEVCKEHL---NKNISIAIEKLV 413
G + +E N S +E L+
Sbjct: 416 FGVYDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|88856857|ref|ZP_01131510.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
gi|88813927|gb|EAR23796.1| methionyl-tRNA synthetase [marine actinobacterium PHSC20C1]
Length = 526
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 40/132 (30%), Gaps = 16/132 (12%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + + +T D+ KI+ A
Sbjct: 16 VNDVPHIGHAYTEVAADVLARWHRQRGEDAWL-----LTGTDEHGQKILRTAVAN----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
N + + +A R T H + +Q + GH Y
Sbjct: 66 -NTTPQEWADRLVADSWQPLLETIDIANDDFIRTTDERHEKAVATFLQRLYDDGHIYAGE 124
Query: 150 NEIIFDTSSIPN 161
E +
Sbjct: 125 YEGYYCVGCEEY 136
>gi|326387756|ref|ZP_08209362.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
gi|326207802|gb|EGD58613.1| methionyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
Length = 541
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 41/130 (31%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I DV+ R +R + + T D+ K+ ++AR +
Sbjct: 29 PHIGHAYEAIAADVIVRFMRAMGRDARLQ-----TGTDEHGLKMAQKARDLGLTA----- 78
Query: 96 ISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + +Q F L + H L + + +G Y E +
Sbjct: 79 -KELADQMSQYFKDMCAALNVGYDVFIRTTEDRHHEASQELWRRMKANGDLYLDRYEGWY 137
Query: 155 DTSSIPNYGS 164
Y
Sbjct: 138 SIRDEAYYDE 147
>gi|255016634|ref|ZP_05288760.1| methionyl-tRNA synthetase [Listeria monocytogenes FSL F2-515]
Length = 185
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 73
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 74 VDEIAEGFQELWKK 87
>gi|163760146|ref|ZP_02167229.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
gi|162282545|gb|EDQ32833.1| methionyl-tRNA synthetase [Hoeflea phototrophica DFL-43]
Length = 514
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 66/413 (15%), Positives = 110/413 (26%), Gaps = 80/413 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R K V ++ TD + K+ + A QE
Sbjct: 19 PHIGHAYTAIATDVLARFQRLDG--KDVFFLSG-TD-EHGQKMQQTAEQEGIK------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ KN+ F RL C H + L + + +G Y +
Sbjct: 69 IALADKNSAVFRDMLERLDCSNDDFIRTTEERHKASVQELWKRMEANGDIYLGKYGGWYS 128
Query: 156 TSSIPNYGS--------------------------------FSRRKIDEQKMGTRVPEKY 183
+ K+ E
Sbjct: 129 VRQEAYFDEGETTLGEDGIRREPLGSPVEWVEEESYYFRLSAYGDKLLELFEKNPEFVAP 188
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRP----GWHI---------------ECSAMSS 224
++ K + + G P H+ +S
Sbjct: 189 AERRNEVASFVKSGLKDLSISRTTFDWGVPVPGNDKHVMYVWVDALTNYITAAGFPDETS 248
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
IH G D++ H A A +E A ++ H L ++G KMSKS GN
Sbjct: 249 EKWNYWPAIHMIGKDIVRFHAVYWPAFLMSA-GLELPAKVFAHGF-LLVKGEKMSKSIGN 306
Query: 285 FITINELLETKKFGG--------------RSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
+ L++ S+ I + + T + L+
Sbjct: 307 VVDPFALIDHYGLDQVRYFFMREVPFGQDGSYSPEAIATRINSDLANGIGNLTSRCLSMI 366
Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
D A+L + + A A ++ + T D++
Sbjct: 367 NKNCDGKVPECGVLTDPDKAMLETADKVIESARADMADFQIHKALTSIIDVVA 419
>gi|229072522|ref|ZP_04205724.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
gi|228710498|gb|EEL62471.1| Methionyl-tRNA synthetase 2 [Bacillus cereus F65185]
Length = 544
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRVKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|14591265|ref|NP_143342.1| arginyl-tRNA synthetase [Pyrococcus horikoshii OT3]
gi|7674343|sp|O59147|SYR_PYRHO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|256032304|pdb|2ZUE|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
Synthetase Complexed With Trna(Arg) And An Atp Analog
(Anp)
gi|256032306|pdb|2ZUF|A Chain A, Crystal Structure Of Pyrococcus Horikoshii Arginyl-Trna
Synthetase Complexed With Trna(Arg)
gi|3257902|dbj|BAA30585.1| 629aa long hypothetical arginyl-tRNA synthetase [Pyrococcus
horikoshii OT3]
Length = 629
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 16/38 (42%), Positives = 23/38 (60%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR I+ DV+ R+LR+ E V +N IDD
Sbjct: 135 HMGHARNAILGDVMARILRFLGYEVEV---QNY--IDD 167
>gi|222100458|ref|YP_002535026.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
gi|221572848|gb|ACM23660.1| Methionyl-tRNA synthetase [Thermotoga neapolitana DSM 4359]
Length = 643
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R+ + V + +T D+ K+++ A+Q
Sbjct: 26 VNSEPHIGSAYTTIVADIIARYKRFMGYD--VFF---LTGTDEHGQKVLQAAQQAGKDPQ 80
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ K Q + + + H+ + + + +G Y+ +
Sbjct: 81 KF--CDELAEKFKQLWKEL---KITNDHFIRTTDETHMKTVQEFVAKMKENGDVYKGVYK 135
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
+ + K ++++
Sbjct: 136 GWYCVPCETFWNEDEVVKEGDERLCPECRR 165
>gi|299820707|ref|ZP_07052596.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
gi|299817728|gb|EFI84963.1| methionine--tRNA ligase [Listeria grayi DSM 20601]
Length = 663
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 17/74 (22%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A+++ S
Sbjct: 21 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKEQGISEQ--QY 73
Query: 96 ISIITSKNTQQFVK 109
+ + + + K
Sbjct: 74 VDEVAEGFQELWKK 87
>gi|297620242|ref|YP_003708347.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
gi|297379219|gb|ADI37374.1| methionyl-tRNA synthetase [Methanococcus voltae A3]
Length = 703
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 26/140 (18%), Positives = 40/140 (28%), Gaps = 16/140 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I DV R L+ E V +V TD + I A +E
Sbjct: 20 HLGHARSTYIPADVYRRFLKLKGEE--VYHVGG-TDNHGV--PITLTAEKEGVK------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + D L ++ HI + + G+ YE E +
Sbjct: 69 PIDIVERYHNAIKADLDTLNVEFDNFGQTHSDVHIETSQEFYRELRKAGYIYEKEIEQFY 128
Query: 155 DTSSIPNYGSFSRRKIDEQK 174
+
Sbjct: 129 CPKCDKYLADRYVEGLCPFC 148
>gi|154149034|ref|YP_001406307.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
gi|153805043|gb|ABS52050.1| methionyl-tRNA synthetase [Campylobacter hominis ATCC BAA-381]
Length = 638
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 27/134 (20%), Positives = 41/134 (30%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R R E +T D+ KI E A++ S
Sbjct: 12 VNDIPHIGHAYTTIICDTLARFYRLQGYETFF-----LTGTDEHGQKIEEAAKKHGTS-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
I + +F HI + + +G Y+
Sbjct: 65 ----PKIYADAVSAKFRSLWDYFDISYDHFIRTTDEYHIKTAQNAFEIMFANGDIYKGEY 120
Query: 151 EIIFDTSSIPNYGS 164
E + S +
Sbjct: 121 EGYYCVSCESFFPE 134
>gi|85708668|ref|ZP_01039734.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
gi|85690202|gb|EAQ30205.1| methionine--tRNA ligase [Erythrobacter sp. NAP1]
Length = 525
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 55/194 (28%), Gaps = 17/194 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I DV+ R R E V + T D+ K+ +A ++
Sbjct: 20 GRPHIGHAYEGIAADVIARFQRLKGRE--VRFQ---TGTDEHGLKMARKAEEQG------ 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHG--HAYEANN 150
+ + + F + L H + + + G +
Sbjct: 69 RTPRDLADEMSGYFREMDEALNIDFDRFIRTVEPEHHRASQAIWERMEAAGDLYLDRYEG 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + + +++ P ++ + F L K P+ ++P
Sbjct: 129 WYSVRDEAYYDESELVEGEGEQKLSPQGTPVEWTVEESWFFRLSKYEKPLLDLLKTPGFL 188
Query: 211 GRPGWHIECSAMSS 224
E A
Sbjct: 189 EPASRRNEMIAFVE 202
>gi|217967311|ref|YP_002352817.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|217336410|gb|ACK42203.1| lysyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 524
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 71/447 (15%), Positives = 128/447 (28%), Gaps = 64/447 (14%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T H+GN R ++ D LYR L+ E Y I D D + + +
Sbjct: 29 GITPSGPIHLGNLREILTGDALYRALQDKGSEVEFIY---IADTFDPLRKVYPFLPDSYA 85
Query: 86 EHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-N 138
EH PI++ + F++ L + + +I
Sbjct: 86 EHVGKPISEIPDPEGCHENYAEHFLEPFLEAIKILGIEPKVIKAHESYKNGLYTEIIDLT 145
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ + + NEI + + + T + KK+ ++ T
Sbjct: 146 LQNNEKITQILNEIAGRNLEKNFVPLLPKCEKCGRLTTTSIVSFDVKKHQVEYQCKCGHT 205
Query: 199 PMEPGWES----PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
+ + PW PG G + G ++ +
Sbjct: 206 GIADYSKGEAKLPWRLDWPGR--------WKIFGVTVEPFGKDHATTGGSYDTGKVITKE 257
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW------------ 302
E +L MS S G I INE+LE +
Sbjct: 258 IFGYEPPYPFIYEWIYLK-GKGAMSSSKGIAIPINEILEILPPSWVRYLILRYKPDKHID 316
Query: 303 -PAPVIRLAMLMTHYR-EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ + + R E I + ++ E L++ + S KG+ +
Sbjct: 317 FDPVNGYILLAEDYERLERIYYRLEGTEEEWAELARVYELSQVKGVPKEPGPQVPLRHII 376
Query: 361 TVSAIQALH-KLARESTKNHDLLPIFNASAHILG-IEVCKEHLNKNISIAIEKLVQE--- 415
T++ I + +L +E IL +E K L K ++ +QE
Sbjct: 377 TLTQISLGNKELLKEMLIRSGYEKELEKFDEILKRVEYVKNWLEKFAPSQVKFKLQEEIP 436
Query: 416 --------------RLIL--LKMKKFS 426
R + +K K +
Sbjct: 437 EIVKSFSPKEKGFLRDLAQKIKEKDWQ 463
>gi|320095415|ref|ZP_08027092.1| hypothetical protein HMPREF9005_1704 [Actinomyces sp. oral taxon
178 str. F0338]
gi|319977608|gb|EFW09274.1| hypothetical protein HMPREF9005_1704 [Actinomyces sp. oral taxon
178 str. F0338]
Length = 42
Score = 47.8 bits (112), Expect = 0.004, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 15/31 (48%)
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
K +S AD +R +L G ++ D ++
Sbjct: 9 AAKDWSRADALRDRLAGAGVVVADGRDGATW 39
>gi|226309673|ref|YP_002769567.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
gi|226092621|dbj|BAH41063.1| methionyl-tRNA synthetase [Brevibacillus brevis NBRC 100599]
Length = 675
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 55/424 (12%), Positives = 104/424 (24%), Gaps = 92/424 (21%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
+ HIGNA I D L R R + V Y +T D+ K+ ERA +E
Sbjct: 16 NKLHIGNAYTTIACDALARYKRLRGYD--VYY---LTGTDEHGQKLQERAAEEGKQPLEF 70
Query: 94 DAI---------------------------SIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+ K Q+ +
Sbjct: 71 IDPIVDWVKDLWEKLDISYDDFIRTTEPRHKEVVQKVFQRLLDQGDIYLGEYEGFYCVPD 130
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK---IDEQKMGTRVPEKY 183
Q +G+ + + S+ + + + +
Sbjct: 131 E---AFWTETQCKTDNGYICPDCGREVKKVKEKNYFFRMSKYQDRLLAHIEANPEFIQPE 187
Query: 184 HKKNPADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECS 220
++N K S + G G+ E
Sbjct: 188 SRRNEMVNNFLKPGLQDLSVSRSTFDWGIKVPTDPEHVIYVWIDALTNYISALGYLSEDD 247
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ ++ ++H G D++ H D +G+L + KMSK
Sbjct: 248 SKYRNFW--PANVHMVGKDILRFHTIYWPILLMALD--IPLPKQIFGHGWLLMPDGKMSK 303
Query: 281 SNGNFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQR 326
S GN I L++ G + + + + +
Sbjct: 304 SKGNVIDPKVLIDRYGSDGVRYFLLREINFGQDGIFTPESFVQRLNYDLANDIGNLLSRT 363
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVL----------SALYNDLNTVSAIQALHKLAREST 376
T E G D +++ ++ +A+ + +L +
Sbjct: 364 ATMIEKYFDGIVPAPQDAGEPDDSLIGLAMKTKALVEEHMEEMRFSNALAHIWELVGRTN 423
Query: 377 KNHD 380
K D
Sbjct: 424 KYID 427
>gi|332971056|gb|EGK10026.1| methionine--tRNA ligase [Desmospora sp. 8437]
Length = 668
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 39/144 (27%), Gaps = 17/144 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V Y +T D+ KI RA+++
Sbjct: 25 DKLHIGHAYTTVAGDAMARYKRLRGYD--VLY---LTGTDEHGQKIERRAKEQGM----- 74
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANN 150
A + K L H L Q ++ G Y E
Sbjct: 75 -APQEFVDGIVKGIRKLWDELEISYDDFIRTTQDRHKKVAQQLFQRLLDQGDIYLDEYEG 133
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
S +
Sbjct: 134 WYCTPCESFWTERQLEEGNCPDCH 157
>gi|206889557|ref|YP_002248229.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
gi|206741495|gb|ACI20552.1| methionyl-tRNA synthetase [Thermodesulfovibrio yellowstonii DSM
11347]
Length = 642
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 48/329 (14%), Positives = 92/329 (27%), Gaps = 65/329 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D+L R +R + V + +T D+ K+ A Q+ +
Sbjct: 16 VNDIPHIGHAYTTIAADILARYMRLKG--RKVFF---LTGTDEHGQKVERAALQKGKTPK 70
Query: 92 I-------------------NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
NDA T + ++ V++ + R +
Sbjct: 71 EHADIMVENFKTLWKGLNISNDAFIRTTDEEHKRIVQEILQRLYDKGEIVKR--KYSGMY 128
Query: 133 IYLIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ + + + S ++ + E +
Sbjct: 129 CTPCERFWTEKDLVEGKCPDCGRDVEFIEEENYFFLMSKYQQALIEHIEKNPSYILPETR 188
Query: 187 NPADFILWKRST-----------PMEPGWESPWGRGRPGW----HIECSAMSSHYLGKVF 231
K T +E G P+ + + + YL
Sbjct: 189 KNEVLGFLKNRTLGDLCISRPKHRLEWGIILPFDENYTTYVWFDALVNYYSALKYLAPEN 248
Query: 232 ------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D H G D++ H +G+ ++G+KMSKS GN
Sbjct: 249 VEWWPPDHHLIGKDILTTHAVYWSTMLMAL--ELPLPRNIFAHGWWTVKGKKMSKSLGNV 306
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMT 314
+ +E++ + + R +
Sbjct: 307 VNPSEVI-------KKYGVDAFRYFLFRE 328
>gi|291288265|ref|YP_003505081.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
gi|290885425|gb|ADD69125.1| methionyl-tRNA synthetase [Denitrovibrio acetiphilus DSM 12809]
Length = 644
Score = 47.4 bits (111), Expect = 0.004, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 43/134 (32%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D + R R + V + +T D+ KI + A++ +
Sbjct: 15 VNDVPHIGHAYTTVACDTISRYKRLCGFD--VCF---LTGTDEHGQKIEQAAQKRGIT-- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANN 150
+ + Q+F L H + + + +G Y +
Sbjct: 68 ----PKALADEVVQRFAGLWKILNISNDKFIRTTDELHKKAVRKIFDKMKENGDIYLDHY 123
Query: 151 EIIFDTSSIPNYGS 164
E + T
Sbjct: 124 EGWYCTPCETYLTE 137
>gi|182437585|ref|YP_001825304.1| methionyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|178466101|dbj|BAG20621.1| putative methionyl-tRNA synthetase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 537
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A + +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANNVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ G Y
Sbjct: 78 A--WCDKLVEEAWKPLWEHLNIAN--DDFIRTTEKRHTDRVQEFVQDLYDKGEIY 128
>gi|330837433|ref|YP_004412074.1| lysyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
gi|329749336|gb|AEC02692.1| lysyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
Length = 530
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
Y C G T HIGN R +I D++ R LR + V ++
Sbjct: 34 YTCASGITPSGTVHIGNFREIISVDLVVRALRSQGHD--VRFI 74
>gi|217077634|ref|YP_002335352.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
gi|217037489|gb|ACJ76011.1| methionyl-tRNA synthetase [Thermosipho africanus TCF52B]
Length = 638
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 28/171 (16%), Positives = 59/171 (34%), Gaps = 13/171 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I+ D++ R R E V Y +T D+ KI++ A+++ +
Sbjct: 13 VNSEPHIGSAYTTIIGDIIARYKRLMGYE--VFY---LTGTDEHGQKIMQAAKKQGKTPQ 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
++ K Q + KD + HI + + + ++ + Y+ +
Sbjct: 68 --QLCDELSKKFEQLW-KDLKITN--DYFIRTTDEEHIKTVQFFVSKMLENEDIYKGKYK 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ + K + + + ++ S EP
Sbjct: 123 GWYCVPCETYWSEDEIEKDENNNPVCPSCHRPLNFVEEENYFFRLSKYTEP 173
>gi|319404210|emb|CBI77803.1| Methionyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
Length = 513
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 45/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A IV D L R + K V ++ TD + + + +N
Sbjct: 16 SAPHIGHAYNAIVSDTLARFQKADG--KNVFFLSG-TD-----EHGLKMQQTAEMLNITP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K L C H L + + G Y +
Sbjct: 68 QQLADRNSAVFQKMLAVLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGCYAGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y E + + N + ++
Sbjct: 128 VRQESYYEEKDTEVDQEGVRREKELGSPVEWNEEESYFFR 167
>gi|229135869|ref|ZP_04264636.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
gi|228647578|gb|EEL03646.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST196]
Length = 544
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PIAIRAKQEGVTV----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|194745961|ref|XP_001955453.1| GF18774 [Drosophila ananassae]
gi|190628490|gb|EDV44014.1| GF18774 [Drosophila ananassae]
Length = 568
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 52/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E+ V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLKYPERKVRLC---TGTDEHGTKIQQAAALHKV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+ + + F + H + + + + GH Y A +
Sbjct: 84 VATYCDQISERYREVFQNAN---ILQDDFIRTTEERHKRAVAHFWRTLNSRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S + + + +++ + W
Sbjct: 141 GWYCVSDETFLTDSQLKLDEATGARYSLESGHPVEWTEETNYMFRLSKFQDDVIHWVKQE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARIRPAKF 208
>gi|328793414|ref|XP_003251876.1| PREDICTED: probable cysteinyl-tRNA synthetase, mitochondrial-like
[Apis mellifera]
Length = 179
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 31/136 (22%), Positives = 47/136 (34%), Gaps = 27/136 (19%)
Query: 343 SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNH---------------DLLPIFNA 387
V AL +D NTV AI++L L K + + N
Sbjct: 39 CLEETKNNVNIALADDFNTVQAIKSLINLIDIGNKMLHDSKDSNITYGTCIPAIAAVLNY 98
Query: 388 SAHIL---GIEVCKEHLNKNISIAIEKLVQERLILLKM------KK---FSSADYIRKQL 435
+ I GI + I+ IE L++ R I+ K + D IR +L
Sbjct: 99 ISTIFSKFGISNSSTTNDNKINNLIECLIKFRHIVRNKVLEHDVKDKTLLIACDKIRSEL 158
Query: 436 ESKGFILEDYKNPDNG 451
+ G I++D K
Sbjct: 159 STYGIIIKDCKTKTIW 174
>gi|111022628|ref|YP_705600.1| methionyl-tRNA synthetase [Rhodococcus jostii RHA1]
gi|110822158|gb|ABG97442.1| methionine--tRNA ligase [Rhodococcus jostii RHA1]
Length = 519
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 48/161 (29%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D L R R + V + +T D+ K+ + A +E +
Sbjct: 26 PHIGHAYEYISSDALARFKRLDGFD--VYF---MTGTDEHGLKMQQTAAKEGIDV----- 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ F L +H + + ++ +G Y +
Sbjct: 76 -RELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWRRMLDNGDIYLDTYSGWY 134
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y D+ + + +K
Sbjct: 135 SVRDEAFYTEAETTLQDDGSRLSTETGTPVEWTEESTYFFK 175
>gi|256372693|ref|YP_003110517.1| cysteinyl-tRNA synthetase-like protein [Acidimicrobium ferrooxidans
DSM 10331]
gi|256009277|gb|ACU54844.1| cysteinyl-tRNA synthetase-like protein [Acidimicrobium ferrooxidans
DSM 10331]
Length = 369
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 6/35 (17%)
Query: 424 KFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWK 458
F+ D++R L + G I+ED TRW+
Sbjct: 335 DFALGDHLRDALAAGGVIVEDT------PEGTRWR 363
>gi|187649786|sp|Q2FU77|SYM_METHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
Length = 664
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 26/180 (14%), Positives = 44/180 (24%), Gaps = 27/180 (15%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y H+G+ R + D R +R E V ++ D I+ A
Sbjct: 9 TCGL-PYTNGPCHLGHLRTYVPADFYVRFMRRKGEE--VVFICG----SDNHGTPIVVSA 61
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E + I+ + F T +H +
Sbjct: 62 EKEGTT------PRQISERYHTHF--------SDTFTKMQVHFDHFGMTDDPTTHARTKH 107
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
+ I +K + + K D +EPG
Sbjct: 108 LVSRLIDRGYVYPKVIQQAYCIHCQKFLPDRYLEGICPHCKKPARGDECDQGCGKHLEPG 167
>gi|51244638|ref|YP_064522.1| methionyl-tRNA synthetase [Desulfotalea psychrophila LSv54]
gi|50875675|emb|CAG35515.1| probable methionyl-tRNA synthetase [Desulfotalea psychrophila
LSv54]
Length = 645
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 29/187 (15%), Positives = 50/187 (26%), Gaps = 19/187 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D R R+ GE V + T D +KI+E A +
Sbjct: 12 VNAQPHLGHAYTTIVADTYSR-FRHLCGE-DVRFQ---TGTDEHGEKIVEAAEKNG---- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+A + + F + L + NHI + ++Q + G Y
Sbjct: 63 --EAPKEYVDRISGMFRQTWPILGIEPDNYIRTTDANHIATVQKVLQQVYDKGDIYFDKY 120
Query: 151 E-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + K + +
Sbjct: 121 TGLYCRGCERFLTEKELVDGKCPDHQTAPQEIAEQNYFFK---MSKYQQQLLDHINANED 177
Query: 210 RGRPGWH 216
P +
Sbjct: 178 FITPHRY 184
>gi|330817988|ref|YP_004361693.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327370381|gb|AEA61737.1| Methionyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 718
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD I+ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYV----GADDTHGTPIMLRAEQEGLS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIERVWGEHKRDFDSFGISFDNFYTTDSEENRVLSENIYLALKEAGLIAERDIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELINPY 187
>gi|255036715|ref|YP_003087336.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
gi|254949471|gb|ACT94171.1| methionyl-tRNA synthetase [Dyadobacter fermentans DSM 18053]
Length = 691
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 29/197 (14%), Positives = 56/197 (28%), Gaps = 24/197 (12%)
Query: 28 MYVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERA 83
+Y GP HIG+ + D+ R LR K V ++ TD + I RA
Sbjct: 16 IYANGP-----IHIGHLAGCYVPADIYVRYLRSSG--KDVAFISG-TDEHGV--PITIRA 65
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIIL 141
++E + + K +Q L R + H + +++
Sbjct: 66 KKEGLT------PQQVVDKYYEQIDASFKALGIS-FDIYSRTSKPVHHETSREIFRDLYD 118
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA-DFILWKRSTPM 200
E E +D ++ ++ + L +
Sbjct: 119 KKVFIEETTEQYYDETAQQFLADRYIVGTCPVCANPNAYGDQCERCGSTLSPLELKDPRS 178
Query: 201 EPGWESPWGRGRPGWHI 217
P + W++
Sbjct: 179 TLSGAKPVLKATKNWYL 195
>gi|229164009|ref|ZP_04291946.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
gi|228619392|gb|EEK76281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus R309803]
Length = 544
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|228993397|ref|ZP_04153313.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
gi|228766465|gb|EEM15108.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
Length = 231
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 23/46 (50%)
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPD 449
+ I L+ R + LK KK +A Y+R+ L G ++ D KN
Sbjct: 174 DFPEKINALLHARELALKEKKVDTAKYLREDLAKLGVVIRDEKNGQ 219
>gi|229049724|ref|ZP_04194281.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
gi|229112480|ref|ZP_04242017.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
gi|228670860|gb|EEL26167.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-15]
gi|228722637|gb|EEL74025.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH676]
Length = 544
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|229147584|ref|ZP_04275929.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
gi|228635874|gb|EEK92359.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST24]
Length = 544
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|134046374|ref|YP_001097859.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|187647746|sp|A4FZL1|SYM_METM5 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|132663999|gb|ABO35645.1| methionyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 663
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 41/137 (29%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D+ R LR E V +V TD + I A +E
Sbjct: 17 HLGHARSTYIPADIYTRYLRLKGEE--VIHVGG-TDNHGV--PITLTAEREGVK------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + D L T ++ HI + +G+ YE E +
Sbjct: 66 PIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CEKCDMYLADRYVEGIC 142
>gi|94266428|ref|ZP_01290123.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
gi|93452970|gb|EAT03469.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
Length = 507
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 89/333 (26%), Gaps = 73/333 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A +V D + R R E V + T D DKI+ A++ +
Sbjct: 12 VNAQPHLGHAYTGVVADTVARFARLDGEE--VFFQ---TGTDEHGDKIVGAAKEAEVDL- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ + F + L HI + +++Q + G Y
Sbjct: 66 -----REYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDY 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI--LWKRSTPMEPGWES 206
K + ++ + + P + +
Sbjct: 121 AGLYCRGCERFLTEKELVDGKCPDHQVAPAEIREQNYFFKMSRYQQWLIDHIKEHPEFIT 180
Query: 207 P-----------------WGRGRPGWHIECSA---MSSHYLGKVF--------------- 231
P RP +E +++ V+
Sbjct: 181 PERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGYPD 240
Query: 232 ----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
H D++ H A + + +H N+ KMSKS
Sbjct: 241 APDFAPRWAAAEHLIAKDIL-KPHAIFWPTMLRAMGLPPYRRLHVHGY-WNVNEAKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
GN + +++E + A +R +L
Sbjct: 299 IGNVVRPQDMVE-------QFGADTVRYFLLRE 324
>gi|46204292|ref|ZP_00050208.2| COG0143: Methionyl-tRNA synthetase [Magnetospirillum
magnetotacticum MS-1]
Length = 159
Score = 47.4 bits (111), Expect = 0.005, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 39/133 (29%), Gaps = 9/133 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + E +
Sbjct: 16 VNDKPHIGHAYTTLACDVLARFKRLDGFD--VKFLTG-TD-----EHGQKVEKSAEAFGV 67
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ +N+ F + L C H L ++ G Y E
Sbjct: 68 TPKALADQNSANFRELAKILGCTNDDFIRTTEERHKVACQALWDKLLAKGDIYLGAYEGW 127
Query: 154 FDTSSIPNYGSFS 166
+ Y
Sbjct: 128 YSVRDEAFYAEDE 140
>gi|315274506|ref|ZP_07869420.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
gi|313615865|gb|EFR89079.1| methionyl-tRNA synthetase [Listeria marthii FSL S4-120]
Length = 153
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 18/74 (24%), Positives = 31/74 (41%), Gaps = 10/74 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D + R R + V Y +T D+ KI +A++ S +
Sbjct: 22 AHIGHAYTTVAGDAMARYKRLKGYD--VFY---LTGTDEHGQKIQAKAKERGISEQ--EY 74
Query: 96 ISIITSKNTQQFVK 109
+ I + + K
Sbjct: 75 VDEIAEGFQELWKK 88
>gi|254820391|ref|ZP_05225392.1| methionyl-tRNA synthetase [Mycobacterium intracellulare ATCC 13950]
Length = 514
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 47/163 (28%), Gaps = 15/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A + D + R R + V + +T D+ K++E A E
Sbjct: 15 GDPHIGHAYEYVATDAIARFKRLDGFD--VRF---LTGTDEHGLKMVETAAAEGIGT--- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +N+ F + RL +H + + + G Y
Sbjct: 67 ---AELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKEIWRRMAAAGDIYLDTYSG 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + R +D+ ++
Sbjct: 124 WYSVRDERFFVESETRLLDDGTRVAVETGAPVTWTEEQTYFFR 166
>gi|229076419|ref|ZP_04209383.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
gi|228706706|gb|EEL58915.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock4-18]
Length = 544
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|195064774|ref|XP_001996635.1| GH19679 [Drosophila grimshawi]
gi|193892767|gb|EDV91633.1| GH19679 [Drosophila grimshawi]
Length = 578
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 51/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y V T D+ KI + A +P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPTTTVRLC---TGTDEHGTKIQQAAA--GHKVP 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
++ I+++ F + + H + + + GH Y A +
Sbjct: 84 VDQYCDEISARYRDVFKAAS---IAHDDFIRTTEQRHKQAVAHFWHRLKSRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ W
Sbjct: 141 GWYCVSDETFLTDSQLRLDESSGTRYSLESGHPVEWTEETNYMFRLSNFQDDVRHWVKQE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARVRPAKF 208
>gi|281356569|ref|ZP_06243060.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
gi|281316696|gb|EFB00719.1| methionyl-tRNA synthetase [Victivallis vadensis ATCC BAA-548]
Length = 646
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 55/417 (13%), Positives = 106/417 (25%), Gaps = 78/417 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ DVL R R + +T D+ K+ + A + S
Sbjct: 15 VNDKPHIGHAYTTILADVLARYYRSLNVDTFF-----LTGTDEHGQKVEKAAAKRGVSPK 69
Query: 92 ---------INDAISII----------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
+ + T + ++ V++ + +
Sbjct: 70 QQADETVVRFQELWKRLGITNDRFIRTTDEYHKEVVREILQELYDRDEIYK--AEYTGWY 127
Query: 133 IYLIQNII-LHGHAYEANNEIIFDTSSIPNYGSFSRRK-----IDEQKMGTRVPEKYHKK 186
+ E + S+I F R + + + +
Sbjct: 128 CVGCERFYTEKDLVEGKCPECGREVSAIRESNYFFRMSKYQQWLIDYIQTHPDFIQPAFR 187
Query: 187 NPADFILWKR--------STPMEPGWESPWGR-----GRPGWHIECSAMS---------- 223
KR W + + +S
Sbjct: 188 ANETLGFLKRELGDLCISRPKSRLSWGIELPFDADYVCYVWFDALINYISAVGYRRNQAE 247
Query: 224 -SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
+ + H G D++ H +G+ KMSKS
Sbjct: 248 FEKWWPASY--HLIGKDILTTHSVYWPTMLKAIG--LPMPRTIFAHGWWLTGNTKMSKSL 303
Query: 283 GNFITINELLETKKFGGRSW-------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
GN + +++E + P + R + + LLS
Sbjct: 304 GNVVNPMDMIEKCGVDAFRYFLLSEMSPGNDANFSEESFVAR----YNSDLANDLGNLLS 359
Query: 336 KWPQTSTSKGIIDPAVLSALYNDL----NTVSAIQALHKLARESTKNHDLLPIFNAS 388
+ + + G + +DL +AI A+ + + L + NA
Sbjct: 360 RVLKMTLRSGGVIQPPAELNADDLELNREVETAIAAMETSLKAMKFDQGLNAVMNAV 416
>gi|33240420|ref|NP_875362.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|33237947|gb|AAQ00015.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 507
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 35/220 (15%), Positives = 61/220 (27%), Gaps = 18/220 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I D R + V + IT +D+ KI A+ + S
Sbjct: 12 VNDKPHLGSTYTTIACDAFARYKKLNGN--NVVF---ITGVDEHGQKIERTAKANNISPS 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
D S I S+ + + ++ H + + +G +
Sbjct: 67 --DHCSKIASQYEMLW---KKWSISNDKFIRTTSSQHKTLVEKFFHRVDQNGDIRLGRQQ 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ K ++P ++ + F L K T +E P
Sbjct: 122 GWYCVGCEEYKDDPPGAKDPIC-STHKMPLEWRDEENLFFCLSKYQTKIENLISQPNFVQ 180
Query: 212 RPGWHIECSAMSSH----YLGKVFDIHGGGLDLIFPHHEN 247
E S + +I G F H
Sbjct: 181 PISRRNEIINFVSKGLKDFSISRVNISWGIPVPGFKGHTF 220
>gi|229175733|ref|ZP_04303239.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
gi|228607684|gb|EEK65000.1| Methionyl-tRNA synthetase 2 [Bacillus cereus MM3]
Length = 544
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + +A +
Sbjct: 66 -KEIADKYHEEFQRCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGYIYKKAVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|319405650|emb|CBI79273.1| Methionyl-tRNA synthetase [Bartonella sp. AR 15-3]
Length = 513
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 46/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A IV D L R + K V ++ TD + + + +N
Sbjct: 16 SAPHIGHAYNAIVSDALARFQKADG--KNVFFLSG-TD-----EHGLKMQQTAQMLNMTP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K L C H L + + G Y +
Sbjct: 68 QQLADRNSAVFQKMLAMLNCSNNDFIRTTEERHHKACQELWKKMEAKGDIYLGCYAGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + E + + N + ++
Sbjct: 128 VRQEAYYEEKDTKIDQEGIRREKELGSPVEWNEEESYFFR 167
>gi|296505474|ref|YP_003667174.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|296326526|gb|ADH09454.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
Length = 544
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGT----PIAIRAKQEGLTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|329113410|ref|ZP_08242191.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
gi|326697235|gb|EGE48895.1| Methionyl-tRNA synthetase [Acetobacter pomorum DM001]
Length = 512
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 15/136 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I DV+ R + V + +T D+ K+ + A+
Sbjct: 14 VNGAPHIGHAYTSIAADVMARF--HRLAGDEVFF---LTGTDEHGQKVEQAAQANGIDA- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
K + F + HI L + + +G Y
Sbjct: 68 -----KSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAY 122
Query: 151 EIIFDTSSIPNYGSFS 166
E + YG
Sbjct: 123 EGWYALRDECFYGEDE 138
>gi|310657778|ref|YP_003935499.1| methionyl-tRNA synthetase [Clostridium sticklandii DSM 519]
gi|308824556|emb|CBH20594.1| methionyl-tRNA synthetase [Clostridium sticklandii]
Length = 651
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 25/180 (13%), Positives = 46/180 (25%), Gaps = 20/180 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPINDAI 96
HIG+ + D + R R+ + V + +T D +KI + A ++
Sbjct: 20 HIGHTYTTVAADAIARYKRFTGFD--VRF---LTGTDEHGEKIQKTAAEKKM------MP 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EANNEII 153
+ K + H + + Q + G Y E
Sbjct: 69 KDYLDGMIEDIKKLWETMEISYDDFIRTTDERHEKAVQKIFQKLYDKGDIYLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
S+ + +K L K P+ + S P
Sbjct: 129 IPCESLWTDTQVGEEHLCPDCKREVQKKKESSYFFK---LSKYQQPLVDYYNSHPDFCFP 185
>gi|269792806|ref|YP_003317710.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
gi|269100441|gb|ACZ19428.1| methionyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM
6589]
Length = 647
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 49/335 (14%), Positives = 81/335 (24%), Gaps = 77/335 (22%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I DVL R R + +T D+ KI + A + +
Sbjct: 16 VNDVPHIGHAYTTIAADVLARHNRMIGRDTFF-----LTGTDEHGQKIQQAASAKGLTA- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTH-------QPRATNHIP------------QM 132
+ + + F + L R HI
Sbjct: 70 -----QQLADQTVENFKRLWKVLNITNDDFIRTTEERHERVVQHIFSKLLEKGDIYLGSY 124
Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
E + + + + ++ + I
Sbjct: 125 EGWYCVPCETYVPEAQMGEGNTCPDCKRPLQKMTEESYFFRMSKYQDRLLEYYESHPEAI 184
Query: 193 LWKRSTPMEPGW-----------ESPWGRGRP----GWHIECSAMS-------------- 223
L K + + G P H+
Sbjct: 185 LPKSRYNEIVSFIKGGLKDQSISRTTLTWGVPVPGDSRHVVYVWFDALINYLSALGYPDE 244
Query: 224 ----SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
+ H G D+I H A D + +G+ ++G KMS
Sbjct: 245 GGKWRKFWPVCH--HLVGKDIIRFHSVVWPALLMALDLEPP--KMVFAHGWWTVDGDKMS 300
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
KS GN + E+ E + R +L
Sbjct: 301 KSKGNVVDPFEMAEL-------YGPDPFRYFLLRE 328
>gi|229916147|ref|YP_002884793.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|229467576|gb|ACQ69348.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 547
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 27/139 (19%), Positives = 46/139 (33%), Gaps = 19/139 (13%)
Query: 35 VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHP 88
VY H+G+ ++ D+L R R + V YV N T I RA+QE
Sbjct: 10 VYANGSLHLGHISSLLSGDILARYYRSKGED--VLYVSGSDCNGT----PITVRAKQEGV 63
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYE 147
S+ I + +FV + L + + H + + + G Y+
Sbjct: 64 SVT------EIADRYHDEFVACYSSLGFSYDVYARTDHSQHHEVVQDIFAELYSKGFIYK 117
Query: 148 ANNEIIFDTSSIPNYGSFS 166
E + +
Sbjct: 118 KEVEQAYCETCDQFLPDRY 136
>gi|94263063|ref|ZP_01286882.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
gi|93456606|gb|EAT06714.1| Methionyl-tRNA synthetase, class Ia [delta proteobacterium MLMS-1]
Length = 507
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 47/333 (14%), Positives = 89/333 (26%), Gaps = 73/333 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A +V D + R R E V + T D DKI+ A++ +
Sbjct: 12 VNAQPHLGHAYTGVVADTVARFARLDGEE--VFFQ---TGTDEHGDKIVGAAKEAEVDL- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ + F + L HI + +++Q + G Y
Sbjct: 66 -----REYVDRISALFRQAWPLLEVEPDNFIRTTDPAHIEVVQHILQQVYQRGDIYFSDY 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI--LWKRSTPMEPGWES 206
K + ++ + + P + +
Sbjct: 121 AGLYCRGCERFLTEKELVDGKCPDHQVAPAEIREQNYFFKMSRYQQWLIDHIKEHPEFIT 180
Query: 207 P-----------------WGRGRPGWHIECSA---MSSHYLGKVF--------------- 231
P RP +E +++ V+
Sbjct: 181 PERYRNEVLSFLSEPLDDLCISRPVSRLEWGIPLPFDRNFVTYVWFDALINYISGIGYPD 240
Query: 232 ----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
H D++ H A + + +H N+ KMSKS
Sbjct: 241 APDFAPRWAAAEHLIAKDIL-KPHAIFWPTMLRAMGLPPYRRLHVHGY-WNVNEAKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
GN + +++E + A +R +L
Sbjct: 299 IGNVVRPQDMVE-------QFGADTVRYFLLRE 324
>gi|150403248|ref|YP_001330542.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|187647747|sp|A6VIW5|SYM_METM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|150034278|gb|ABR66391.1| methionyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 663
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 28/140 (20%), Positives = 41/140 (29%), Gaps = 16/140 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D+ R LR E V +V TD + I A +E
Sbjct: 17 HLGHARSTYIPADIYTRYLRLKGEE--VVHVGG-TDNHGV--PITLTAEREGVK------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + D L T ++ HI + +G+ YE E +
Sbjct: 66 PIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKIDEQK 174
I
Sbjct: 126 CEKCDMYLADRYVEGICPFC 145
>gi|30023071|ref|NP_834702.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|229130292|ref|ZP_04259251.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
gi|68566040|sp|Q815U6|SYM2_BACCR RecName: Full=Methionyl-tRNA synthetase 2; AltName:
Full=Methionine--tRNA ligase 2; Short=MetRS 2
gi|29898631|gb|AAP11903.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|228653225|gb|EEL09104.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-Cer4]
Length = 544
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKIVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|319408565|emb|CBI82218.1| Methionyl-tRNA synthetase [Bartonella schoenbuchensis R1]
Length = 519
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 49/160 (30%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I D L R R K V ++ TD + + + +N
Sbjct: 16 GAPHIGHAYNAIASDSLARFQRLDG--KDVFFLSG-TD-----EHGLKMQQAAEALNITP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K T+L C H + + + +G Y +
Sbjct: 68 QQLADRNSAIFQKMLTKLNCSNDDFIRTTEERHHRTCQAIWKKMEANGDIYLDRYAGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + ++ + + N + +K
Sbjct: 128 VRQESYYEEKDTQIGEDGIRREKELGSPVEWNEEESYFFK 167
>gi|50549799|ref|XP_502371.1| YALI0D03619p [Yarrowia lipolytica]
gi|49648239|emb|CAG80559.1| YALI0D03619p [Yarrowia lipolytica]
Length = 532
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 57/347 (16%), Positives = 109/347 (31%), Gaps = 71/347 (20%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+ M++ DV+ R TY+ +T ID+ KI A E ++
Sbjct: 35 PHVGHLYSMVLADVIKRY---NGLNGKDTYL--LTGIDEHGLKIQTAA--EKLNLQPKIL 87
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEII 153
+ K K + + R T +H+ + + + G+ Y+ ++
Sbjct: 88 CDQLAEKF-----KQLAEVGNIDNNRFMRTTDADHVNTVNDMWDRLTKAGYIYKGSHSGY 142
Query: 154 FDTSSIPNYGSFSRRKID----------EQKMGTRVPEKYHKKNPADFILWKRSTPME-- 201
+ S Y +++ E + + D +L + E
Sbjct: 143 YCVSDETYYPRDKCHEVNGRLVSIETGKEVEWTEEENYFFRLSAMRDKLLEFYNANPEFV 202
Query: 202 ------------------------PGWESPWGRGRPGWHIECSAMSSH----------YL 227
P WG PG + + +
Sbjct: 203 MPKEVYRGIVDEVSRDLPDLSISRPTNRLSWGIPVPGDDSQVIYVWLDALVNYATAQGFD 262
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
+H G D+ H A A I+ ++ +H+ +++ EG+KMSKS GN +
Sbjct: 263 TVSEAVHIVGKDIQRFHAIYWPAFLLAA-GIKPPKSVLVHSHWIS-EGQKMSKSIGNVVD 320
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
++ + L M H + DFT ++ E +
Sbjct: 321 PMHVISKYGSDSVRF------LLMCDGHLHKDNDFTETKIAEKHNTM 361
>gi|150021072|ref|YP_001306426.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
gi|149793593|gb|ABR31041.1| methionyl-tRNA synthetase [Thermosipho melanesiensis BI429]
Length = 634
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 29/185 (15%), Positives = 66/185 (35%), Gaps = 15/185 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I+ D++ R R + V Y +T D+ KI++ A+ I
Sbjct: 13 VNSEPHIGSAYTTIIGDIIARYKRLIGYD--VFY---LTGTDEHGQKIMQAAK--KREIE 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
++ K +Q + KD + H+ + + ++ +G Y+ +
Sbjct: 66 PKQLCDELSEKFSQLW-KDLKITN--DYFIRTTDPKHMKTVQLFVSKMLENGDIYKGIYK 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI--LWKRSTPMEPGWESPWG 209
+ + +I+ + + + + ++ L K + P+ ++
Sbjct: 123 GWYCIPCETYWNEDETEQIEGKHICPTCGRELNFVEEENYFFRLSKYTEPLLKHFKENPD 182
Query: 210 RGRPG 214
P
Sbjct: 183 FVEPD 187
>gi|114565624|ref|YP_752778.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
gi|114336559|gb|ABI67407.1| methionyl-tRNA synthetase [Syntrophomonas wolfei subsp. wolfei str.
Goettingen]
Length = 645
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 65/455 (14%), Positives = 129/455 (28%), Gaps = 78/455 (17%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS---- 89
D HIG+A + D + R R + V Y +T D+ KI + AR++
Sbjct: 18 DNLHIGHAYTTVAADCMARFKRMQGYD--VFY---LTGTDEHGQKIEKAAREKGMEPIKY 72
Query: 90 -IPINDAISIITS----------KNTQQFVK--DTTRLACLAPTHQPRATNHIPQMIYLI 136
I ++I + + T+ + + + +
Sbjct: 73 VDGIVESIRQLWETMLITHTDFIRTTEARHEQLVQKIFNKVYEQGDIFISQYEGWYCTPC 132
Query: 137 QNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+ + S S ++ E + +
Sbjct: 133 ETFFTERQLAEGNCPDCGREVELLKEESYFFNMSKYADRLLEHIETHPDFIQPESRRNEV 192
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIE-----------------CSAMSSHYLGKVF-- 231
K + + G P + M K +
Sbjct: 193 VNFIKMGLEDLCVSRTTFQWGVPVPFNQKHVVYVWFDALINYLTAIGYMDDEEKFKQYWP 252
Query: 232 -DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
D+H D+I H D +G++ LEG KMSKS GN +
Sbjct: 253 ADVHLMAKDIIRFHAIIWPIMLMALD--LPLPKKVCAHGWIMLEGGKMSKSKGNVVDPVV 310
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
L+ + + +R + RE +E ++ + G +
Sbjct: 311 LV-------KKYGVDAVRYYL----VRELSFGQDGYYSEEMLVNRINSDLANDLGNLISR 359
Query: 351 VLSALYNDLN-------TVSAIQA-LHKLARESTK-NHDLLPIFNASAHILGIEVCKEHL 401
++ + + A+ L ARE+ + + L + +++I+
Sbjct: 360 TIAMIERYFDGVIPVSGIAEALDEDLINTAREAYREATEKLDKLDFASYIMATRKLVSRA 419
Query: 402 NKNISIAIEKLVQERLILLKMK----KFSSADYIR 432
NK I L+ + + K + ++ A+ IR
Sbjct: 420 NKYIDETAPWLLAK-EVAKKERLASVMYNLAESIR 453
>gi|229105649|ref|ZP_04236282.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
gi|228677785|gb|EEL32029.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-28]
Length = 544
Score = 47.0 bits (110), Expect = 0.006, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|225449565|ref|XP_002279143.1| PREDICTED: similar to AT3g55400/T22E16_60 [Vitis vinifera]
Length = 555
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 60/361 (16%), Positives = 106/361 (29%), Gaps = 33/361 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A S
Sbjct: 79 VNAPPHMGSAYTTIAADAIARFQRLSG--KKVIF---ITGTDEHGEKIATAAAACGSSPS 133
Query: 92 INDAISIITSKN-TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ +I+ T D + T+ ++ N ++ YE
Sbjct: 134 --EHCDVISQAYKTLWQDLDIAYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADYEGLY 191
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
I + + ++ R + N +W G+ S
Sbjct: 192 CINCEEYKVQSWIKSGLRDFSISRASVDWGIPVPNDNKQTIYVWF---DALLGYISALSE 248
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
++ + S G +H G D++ H A A + +GF
Sbjct: 249 DNEQPDLQSAVSS----GWPASLHLIGKDILRFHAVYWPAMLLSAG--LSLPKMVFGHGF 302
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEA 330
L +G KM KS GN + N+L++ + + + D++ R
Sbjct: 303 LTKDGMKMGKSLGNTLEPNDLVQRFGSDAVRY------FFLREVEFGNDGDYSEDRFINI 356
Query: 331 EILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
+ + G + L L + + + LA E D + A
Sbjct: 357 VNAH-----LANTIGNLLNRTLGLLKKNCQST--LAVDSTLAAEGNAFKDTVDKLVEKAK 409
Query: 391 I 391
Sbjct: 410 F 410
>gi|147918827|ref|YP_687447.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
gi|121690214|sp|Q0W0H2|SYM_UNCMA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|110622843|emb|CAJ38121.1| methionyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
Length = 683
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 49/170 (28%), Gaps = 22/170 (12%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R I D+ R LR E +V D II A
Sbjct: 19 TCGL-PYANGSAHIGHLRTYIPADMFVRTLRMMGQETV--FVCG----SDAHGTPIIVNA 71
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIIL 141
++ S + K QF + + + TNH + ++ +
Sbjct: 72 EEQKIS------PRQLVDKYHVQFDSIFKKCGVIFDRYGNTDDPTNHA-RTKSIVSELQK 124
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G+ Y ++ + + ++
Sbjct: 125 NGYVYPKEIKVAYCPQCQRGLPDRYVEGVCPYCSSIARGDECDIGCQRHL 174
>gi|304315621|ref|YP_003850766.1| methionyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
gi|302777123|gb|ADL67682.1| methionyl-tRNA synthetase [Thermoanaerobacterium
thermosaccharolyticum DSM 571]
Length = 636
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 55/404 (13%), Positives = 101/404 (25%), Gaps = 57/404 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI +A+++ +
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD-----VMFLTGTDEHGQKIQRKAKEKGVTPK-- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + K + I Q I+ + E
Sbjct: 69 QYVDEIVA-WIKDLWKTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEGWYC 127
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWGR- 210
+ + + ++ K + P + P R
Sbjct: 128 TPCETFWTEKQLVDGNCPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHPDFIQPESRL 187
Query: 211 ----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE----NEIAQSCCADRIEKTA 262
+E +S + +++ + A D E
Sbjct: 188 NEMVSFIKSGLEDLCVSRTSFDWGVKVPFDPKHVVYVWIDALSNYITALGYSTDHDEDFK 247
Query: 263 NIW----------------------------------IHNGFLNLEGRKMSKSNGNFITI 288
W +G+L L+G KMSKS GN +
Sbjct: 248 KYWPADVHLVGKEIVRFHTIIWPAMLMALDLPLPKKVFGHGWLILDGGKMSKSKGNVVDP 307
Query: 289 NELLETKKFGGRSWP-APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
EL+ + + E + + + + +
Sbjct: 308 KELVSKYGVDAIRYFLLREVPFGADGVFSNEALISRINSDLANDFGNLLSRTVTMVEKYF 367
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHI 391
D V A D I + L + D L NA A I
Sbjct: 368 DGVVPEASDKDNVDDELISIANDLPKIVEGYMDRLQFSNALAEI 411
>gi|222098488|ref|YP_002532546.1| methionyl-tRNA synthetase [Bacillus cereus Q1]
gi|254782851|sp|B9J4E0|SYM_BACCQ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|221242547|gb|ACM15257.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
cereus Q1]
Length = 544
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KDIADQYHEEFERCFRNLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|45357889|ref|NP_987446.1| methionyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|68565983|sp|Q6M0E5|SYM_METMP RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|45047449|emb|CAF29882.1| Methionyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 663
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D+ R L+ E V +V TD + I A +E
Sbjct: 17 HLGHARSTYIPADIFTRYLKLKGEE--VIHVGG-TDNHGV--PITLTAEKEGVK------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + D L ++ HI + +G+ YE E +
Sbjct: 66 PIDIVDRYHNAIKADLDSLNICFDNFGRTHSDIHIETAQEFYSKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CEKCDMYLADRYVEGIC 142
>gi|254520460|ref|ZP_05132516.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
gi|226914209|gb|EEH99410.1| methionyl-tRNA synthetase [Clostridium sp. 7_2_43FAA]
Length = 647
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 63/447 (14%), Positives = 124/447 (27%), Gaps = 87/447 (19%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIGN + D L R R + V +T D+ KI A ++ + +
Sbjct: 20 HIGNTYTTVAADALARYKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGITPKEHVDE 74
Query: 96 ----ISII--------------TSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQMIY 134
I + T + V+D + + P +
Sbjct: 75 IVSGIKDLWKMMNISYDKFIRTTDDYHIKAVQDIFKKLYDKGDIYKSSYEGLYCTPCESF 134
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRK--IDEQKMGTRVPEKYHKKNPADFI 192
+ +++G+ + + + + ++ + + +KN
Sbjct: 135 WTETQLVNGNCPDCGRPVEKSKEEAYFFKMSNYADKLMEYIETHPDFIQPESRKNEMVNN 194
Query: 193 LWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHYLGK 229
K + + G P G+ + + Y
Sbjct: 195 FLKPGLQDLCVSRTSFNWGVPVTFDENHVVYVWIDALSNYITALGYGSDNKDLYDKYW-- 252
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H G D++ H D +G+L ++G KMSKS GN +
Sbjct: 253 PADVHLIGKDILRFHTIYWPIMLMALD--LPLPKQVFGHGWLLVDGGKMSKSKGNVVDPV 310
Query: 290 ELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
L+E + + + + + + + E
Sbjct: 311 TLVENFGVDAVRYYLLREIPFGSDGLFNNEIFIKKINSDLCNDLGNLLSRTVAMIEKYFD 370
Query: 336 KWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIF 385
+ K ID P ++ +DL A++ + +L + K D +
Sbjct: 371 GVIPNNNIKEAIDDELISLALETPKKVNKAIDDLRIPEALENIFELIGRANKYIDETTPW 430
Query: 386 NASAHILGIEVCKEHLNKNISIAIEKL 412
+ E KE L + IE L
Sbjct: 431 ILAKD----EDKKERLGTVLYNLIESL 453
>gi|297849444|ref|XP_002892603.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
lyrata]
gi|297338445|gb|EFH68862.1| hypothetical protein ARALYDRAFT_312128 [Arabidopsis lyrata subsp.
lyrata]
Length = 583
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 44/344 (12%), Positives = 75/344 (21%), Gaps = 46/344 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 23 PYVNNVPHLGNIIGCVLSADVYARYCRLRGYNA--IYICG-TD----------EYGTATE 69
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++ N I K + +T PQ + Q I
Sbjct: 70 TKALEENRTPREICDKYHAIHKEVYDWFDISFDQFGRTST---PQHTQVCQEIFNKLW-- 124
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
N++I + + Y + + ++ + P + D ES
Sbjct: 125 --ENKLISENTIQQLYCDTCNKFLADRLVEGSCPLCNYDSARGDQC------------ES 170
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
P I + D +F AQ W
Sbjct: 171 CGKLLNPTELI-----APRCKVCQTTPEIRDTDHLFIDLPKLKAQLEAYINGTSVRGSWS 225
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
N + + +L + V + I
Sbjct: 226 RNAVQTTNAW-IREGLQQRCITRDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCYTS 284
Query: 327 LTEAEILLSKWP--QTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
E K K + + L T +
Sbjct: 285 EWEQWWKNPKNAELYQFMGKDNVPFHTVMFPSTQLGTGENWTLM 328
>gi|195501663|ref|XP_002097889.1| GE10041 [Drosophila yakuba]
gi|194183990|gb|EDW97601.1| GE10041 [Drosophila yakuba]
Length = 579
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 28/189 (14%), Positives = 49/189 (25%), Gaps = 16/189 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E+ V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLC---TGTDEHGTKIQQAASLHGI--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN- 149
+ I+ + + H + + + GH Y A
Sbjct: 84 VAKYCDDISQRY----REVFRSAGIQPEDFIRTTEDRHKRAVASFWRRLHTRGHIYSAAY 139
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESP 207
+ + S R + + +++ + W
Sbjct: 140 SGWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQ 199
Query: 208 WGRGRPGWH 216
R RP
Sbjct: 200 EARIRPAKF 208
>gi|159905012|ref|YP_001548674.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|159886505|gb|ABX01442.1| methionyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 663
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 28/137 (20%), Positives = 41/137 (29%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D+ R LR E V +V TD + I A +E
Sbjct: 17 HLGHARSTYIPADIYTRYLRLKGEE--VVHVGG-TDNHGV--PITLTAEREGVK------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I + D L T ++ HI + +G+ YE E +
Sbjct: 66 PIDIVDRYHNAIKADLDSLNVSFDTFGRTHSDIHIKTAQEFYSKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CEKCDMYLADRYVEGIC 142
>gi|161485679|ref|NP_632891.2| methionyl-tRNA synthetase [Methanosarcina mazei Go1]
gi|25009360|sp|Q8PYJ4|SYM_METMA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
Length = 715
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + D+ R L+ E VT+V D I+ A
Sbjct: 16 TCGL-PYANGKAHIGHLRTYVPADIYARSLKKEGRE--VTFVCG----SDTHGTPIVVNA 68
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
+ + + + + F + +L + + ++ +I
Sbjct: 69 EE------LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEK 122
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y EI + + T ++ +
Sbjct: 123 GYVYPKIIEIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHL 171
>gi|228910874|ref|ZP_04074683.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
gi|228848825|gb|EEM93670.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 200]
Length = 544
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKGED--VLYVSGSDCNGT----PITIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
T + + + + +L K+
Sbjct: 125 CKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|20089423|ref|NP_615498.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
gi|24418703|sp|Q8TTA3|SYK1_METAC RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
ligase 1; Short=LysRS 1
gi|19914323|gb|AAM03978.1| lysyl-tRNA synthetase [Methanosarcina acetivorans C2A]
Length = 533
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 57/343 (16%), Positives = 102/343 (29%), Gaps = 40/343 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T HIGN R ++ D YR L + + Y I D D + + +
Sbjct: 23 GITPSGHIHIGNMREVVTADAAYRALLDMGADARLIY---IADNYDPLRKVYPFLPESYA 79
Query: 86 EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
EH PI++ + + F++ RL + I+
Sbjct: 80 EHVGKPISEVPCPCGDCANYAEHFLKPFIEALRRLGINPEVLRADEMYRAGLYTEAIKTA 139
Query: 140 ILHGH-AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ + E+ T + R + T+V + D++ +
Sbjct: 140 LAKRDEIAKILEEVSGKTVAEDWSPFNPRCNECGKITTTKVAGFDLEAETVDYVCACGHS 199
Query: 199 PMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
P G + W P LG + G ++
Sbjct: 200 GTVPMAGGGKLTWRVDWPAR--------WAVLGVTVEPFGKDHASKGGSYDTGKRIVREI 251
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E I + + MS S G ++I+++LE P V+R ++ T
Sbjct: 252 YGHEPPFPIVYEW-IMLGKRGAMSSSTGVVVSISDMLEVV-------PPEVLRYLIIRTK 303
Query: 316 YREPIDFTVQRL-----TEAEILLSKWPQTSTSKGIIDPAVLS 353
+ I F + E E L K+ + S G + +
Sbjct: 304 PEKHIQFDPGQPLLNLVDEYERLRDKFRENDPSLGDFEKRIYE 346
>gi|304391677|ref|ZP_07373619.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
gi|303295906|gb|EFL90264.1| methionyl-tRNA synthetase [Ahrensia sp. R2A130]
Length = 513
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 39/132 (29%), Gaps = 11/132 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + TD+ K+ + AR +
Sbjct: 16 GAPHIGHAYEFICADAIARFKRLDGYD--VRFQIG-TDVHGQKMFQTAR------DLGIT 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ KN+ F T + +H + + +G Y+ +
Sbjct: 67 PKELADKNSDAFQSMTEHYGISWDRFIRTSDEDHHRASQAIWSAMEANGDIYKDAYAGWY 126
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 127 SVRDEAYYEEDE 138
>gi|239831997|ref|ZP_04680326.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
gi|239824264|gb|EEQ95832.1| methionyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
Length = 525
Score = 47.0 bits (110), Expect = 0.007, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 15/138 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+++ AR+E +
Sbjct: 31 PHIGHAYELIATDAMARFQRLNG--KDVFF---LTGTDEHGIKMLQSARKEGIT------ 79
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + + + +G Y+ +
Sbjct: 80 PRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMADNGDIYKGGYAGWY 139
Query: 155 DTSSIPNYGSFSRRKIDE 172
YG ++
Sbjct: 140 SVRDEAYYGEEETEVRED 157
>gi|296273248|ref|YP_003655879.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296097422|gb|ADG93372.1| methionyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 648
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 52/182 (28%), Gaps = 17/182 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D AHIG+A I+ D+L R R K + +T D+ KI E A+ +
Sbjct: 16 VNDVAHIGHAYTTIIADMLARYSRLTG--KKTFF---LTGTDEHGQKIEESAKLRGKTSK 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ ++ K + + H + + + + G Y+ E
Sbjct: 71 --EYADEVSGKFRALW---DDFDITYDKFIRTTDEEHKTGVQFAFEKMFNKGDIYKGEYE 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL-WKRSTPMEPGWESPWGR 210
+ S + + E + + + + W
Sbjct: 126 GYYCVSCETFFTEKQ---LIEDEFCPDCGKPTNIVKEESYFFKLSAYEDKLLKWYEENPD 182
Query: 211 GR 212
Sbjct: 183 CI 184
>gi|159029236|emb|CAO87596.1| metG [Microcystis aeruginosa PCC 7806]
Length = 537
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 13/170 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A IV DV+ R R + IT D+ KI A + +
Sbjct: 19 VNDIPHIGSAYTTIVADVMARWKRLQGNSVLL-----ITGTDEHGQKIERTAAAKGLNPQ 73
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + K + + T PR H + + + G Y +
Sbjct: 74 --EHCDRIATSFANLWAKLHIQYDRFSRTTAPR---HQAIVNEFFEKVWEKGDIYLDRQQ 128
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + T + ++ + F L K +E
Sbjct: 129 GWYCVACEEFKEKRELLDNGCCPIHTNLAAEWRDEENYFFRLSKYQAQLE 178
>gi|160902697|ref|YP_001568278.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
gi|160360341|gb|ABX31955.1| methionyl-tRNA synthetase [Petrotoga mobilis SJ95]
Length = 645
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 31/191 (16%), Positives = 65/191 (34%), Gaps = 15/191 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV D++ R R + V + +T D+ K+++ A++++ P
Sbjct: 13 VNSEPHIGSAYTTIVADIVARFKRMMGYD--VFF---LTGTDEHGQKVLQAAKEKNI--P 65
Query: 92 INDAISIITSKNTQQFVKD---TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--Y 146
+ + ++SK + + + + + ++ +A Y
Sbjct: 66 PQEYVDSLSSKFKNLWDEMGISYDHFVRTTDAYHVKTVQMFVDKMMENGDVYKGKYAGWY 125
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
++E +D S I +++ E Y K + P +
Sbjct: 126 CIHDESFWDESEIVTQDGVKLCPECNRELKWVEEENYFFKLSKYTEPLLKHYENNPDFVE 185
Query: 207 PWGRGRPGWHI 217
P R I
Sbjct: 186 PSFRRNEMLQI 196
>gi|229153227|ref|ZP_04281406.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
gi|228630326|gb|EEK86976.1| Methionyl-tRNA synthetase 2 [Bacillus cereus m1550]
Length = 544
Score = 46.6 bits (109), Expect = 0.007, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|84997678|ref|XP_953560.1| methionyl-tRNA synthetase [Theileria annulata]
gi|65304557|emb|CAI72882.1| methionyl-tRNA synthetase, putative [Theileria annulata]
Length = 573
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 41/129 (31%), Gaps = 9/129 (6%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
H+G+A ++ DVL R L E + V TD ++ + S + +
Sbjct: 80 GPPHLGHAYTLVSSDVLKRFLILSGYECKL-LVG--TD-----EHGSKIKLTSSNLGYSP 131
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + + + + N H ++ + + + G Y ++ F
Sbjct: 132 KQYVNLMRNHYYELYKQYDISPDIVVHTSENDHKSKVKDVFNSFVRSGFIYRGLHKGYFS 191
Query: 156 TSSIPNYGS 164
Y
Sbjct: 192 PKEDLYYTE 200
>gi|326789740|ref|YP_004307561.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
gi|326540504|gb|ADZ82363.1| methionyl-tRNA synthetase [Clostridium lentocellum DSM 5427]
Length = 658
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 18/151 (11%), Positives = 37/151 (24%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG++ + D + R R + V +T D+ KI RA ++ +
Sbjct: 20 HIGHSYTTVAADAMARYKRLRGYD-----VMFLTGTDEHGQKIERRAAEDGVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ H + + + + G Y+
Sbjct: 69 QAFVDHIVDWIKDLWKTMDISYDKFIRTTDKEHEETVQKIFKKLYDKGDIYKSEYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + ++
Sbjct: 129 TPCESFFTEHQLVDGKCPDCGRPVEKVKEES 159
>gi|218231128|ref|YP_002369842.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
gi|226695274|sp|B7HD62|SYM_BACC4 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|218159085|gb|ACK59077.1| putative methionyl-tRNA synthetase [Bacillus cereus B4264]
Length = 544
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|317484604|ref|ZP_07943508.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316924144|gb|EFV45326.1| methionyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 662
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 57/459 (12%), Positives = 116/459 (25%), Gaps = 92/459 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D L R + +T D DKI++ A +
Sbjct: 14 VNARPHLGHAYTTIVADSLRRFHTLLGEDTWF-----LTGTDEHGDKIVKAAEAAGQTPQ 68
Query: 92 INDAISIITSKNTQQF----VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + I+ + + +K + H+ R + ++ +
Sbjct: 69 --EFVDGISGQFQALWPKLGIKHDQFIRTTDADHKARVQAFLQKVYDNGDIYFGEHGGHY 126
Query: 148 ANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP------------------ 188
+ + N + + K P
Sbjct: 127 CTGCERFYTEKELENGLCPQHLTKPDFIQEKNYFFRMSKYLPWLAGHIRENPDFIRPERY 186
Query: 189 -------------ADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMS-------SH 225
D + + +E G E P+ + + + +S
Sbjct: 187 RNEVLSMIESGALEDLCISRPKNRLEWGIELPFDKDYVCYVWFDALLNYISALGWPDGDK 246
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y H D++ PH A +G+ ++ KMSKS GN
Sbjct: 247 YAAYWPGEHLVAKDILKPHGVFWPTMLKSAG--VPLYKHLNVHGYWLIKDTKMSKSLGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ ++ E + + + + + L+
Sbjct: 305 VEPIKMAEHYGLDAFRYFLLRDMQFGSDASFSEEALITRFNADLANDLGNLFSRVLSMNA 364
Query: 332 ILLSKWPQTSTSKGIIDPAVLS----------ALYNDLNTVSAIQALHKLARESTKNHDL 381
D A++ L+ ++ + AL L R K D
Sbjct: 365 KYFESKVPPMGELAEDDKALIELAENSRRNYVQLFGNIRFSQGLDALWDLVRALNKYVDS 424
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ-ERLIL 419
+ + K+ + I L++ R +
Sbjct: 425 QAPWT---------LFKQGDTARLGTVIRLLLECMRKVA 454
>gi|229062703|ref|ZP_04200011.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
gi|228716572|gb|EEL68271.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH603]
Length = 544
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PITIRAKQEGVTV----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|253827052|ref|ZP_04869937.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|253510458|gb|EES89117.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
Length = 654
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 36/264 (13%), Positives = 68/264 (25%), Gaps = 25/264 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R + + V + +T D+ KI + A +
Sbjct: 18 VNDVPHIGHAYTTIIADTLARY--HRIQNEEVWF---LTGTDEHGQKIQQSAEKN----- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + +F + H + + + G Y+
Sbjct: 68 -NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEY 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
E + S + K + +K W
Sbjct: 127 EGNYCISCESFFAKSQLINHKNC----PDCGKETNLLKEESYFFKLSAYEDRLLQWIESN 182
Query: 209 GRGR-PGWHIECSAMSSHYLGKVFDIHGGGLD---LIFPHHENEIAQSCCADRIEKTANI 264
P + I D + E+ ++ ++ N
Sbjct: 183 PDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDALVNY 242
Query: 265 WIHNGFLNLEGRKMSKSNGNFITI 288
G+ N + KM N+ +
Sbjct: 243 LSALGYENSKENKMEFWPANYHLV 266
>gi|190570583|ref|YP_001974941.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|190356855|emb|CAQ54226.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
Length = 509
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 42/134 (31%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLICDVAARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKTKGIE-- 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T + + F K + H +I L + G Y +
Sbjct: 69 ----PKEFTDEISVTFRKLAELMNFDYDDFIRTTEERHEKAVIALWNRLEERGQIYLDSY 124
Query: 151 EIIFDTSSIPNYGS 164
+ Y
Sbjct: 125 SGWYSVRDEAFYQE 138
>gi|163942754|ref|YP_001647638.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229558040|sp|A9VP41|SYM_BACWK RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|163864951|gb|ABY46010.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
Length = 544
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PITIRAKQEGVTV----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|134297944|ref|YP_001111440.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
gi|134050644|gb|ABO48615.1| methionyl-tRNA synthetase [Desulfotomaculum reducens MI-1]
Length = 518
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 47/181 (25%), Gaps = 19/181 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI A+ N
Sbjct: 19 DNLHIGHAYTTVAADTMARYKRLTGYD--VWF---LTGSDEHGQKIERAAK------NKN 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
F K RL H + Q + G Y+
Sbjct: 68 QTPKEYVDHIVSGFKKLWERLDVSYNDFIRTTDERHHKVVQKFFQQLFDQGDIYKSEYEG 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESPW 208
+ + K + + + Y + W + P + P
Sbjct: 128 WYCTPCETFFTEYQLAEGKCPDCQREVEKVREESYFFRQSKYAERWLKFIEENPEFIQPV 187
Query: 209 G 209
Sbjct: 188 S 188
>gi|254469852|ref|ZP_05083257.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
gi|211961687|gb|EEA96882.1| methionyl-tRNA synthetase [Pseudovibrio sp. JE062]
Length = 517
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 11/128 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI-DDKIIERARQEHPSIPINDAIS 97
HIG+A I DVL R R E V ++ TD+ K+++ A +E S S
Sbjct: 20 PHIGHAYEAIATDVLARFQRLDGRE--VHFLTG-TDVHGQKMLQTAVKEGMS------PS 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ KN++ F + L C H + Q + G Y+ + +
Sbjct: 71 DLADKNSKLFREMVEMLGCSNDDFIQTNEERHYKSCQAIWQKMADAGDIYKDSYAGWYSV 130
Query: 157 SSIPNYGS 164
Y
Sbjct: 131 RDEAYYQE 138
>gi|304407079|ref|ZP_07388733.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
gi|304344066|gb|EFM09906.1| methionyl-tRNA synthetase [Paenibacillus curdlanolyticus YK9]
Length = 662
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 19/152 (12%), Positives = 42/152 (27%), Gaps = 13/152 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V Y +T D+ KI +A++ +
Sbjct: 19 DKLHIGHAYTTVAGDAMARYKRLRGYD--VRY---LTGTDEHGQKIERKAQESGKTPLQF 73
Query: 94 DAISIIT-SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + ++ R I + +I +
Sbjct: 74 VDEIVLGIKELWKKLDISYDDYIRTTEDRHKRVVERIFTKLVEQGDIYKGEY----EGWY 129
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + + + ++
Sbjct: 130 CTPCESFFPERQLNDGNCPDCGRPVELVKEES 161
>gi|319898928|ref|YP_004159021.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
gi|319402892|emb|CBI76443.1| Methionyl-tRNA synthetase [Bartonella clarridgeiae 73]
Length = 513
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 9/158 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A IV D L R R K V ++ TD + + + +N
Sbjct: 18 PHIGHAYNAIVSDALARFQRADG--KDVFFLSG-TD-----EHGLKMQQTAQMLNITPQQ 69
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ F K L C H L + + G Y + S
Sbjct: 70 LADRNSAVFQKMLEILNCSNNDFIRTTEKRHHQASQELWKKMEAKGDIYLGRYTGWYSVS 129
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y ++ + + N + ++
Sbjct: 130 QEAYYEEKDTEIDEKGIRREKELNSPVEWNEEESYFFR 167
>gi|317970030|ref|ZP_07971420.1| hypothetical protein SCB02_10861 [Synechococcus sp. CB0205]
Length = 74
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 12/47 (25%), Positives = 20/47 (42%), Gaps = 5/47 (10%)
Query: 411 KLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K ++ R K ++A IR +L+++G L D T W
Sbjct: 30 KRIEARKAAKTAKGLAAAGGIRNELKAQGIELIDKPGGL-----TEW 71
>gi|218437104|ref|YP_002375433.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
gi|218169832|gb|ACK68565.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7424]
Length = 530
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV+ R R + IT D+ KI A +
Sbjct: 20 VNDIPHIGSAYTTMIADVIARWKRLQGYSVLL-----ITGTDEHGQKIQRTAESKGL--- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ +F +L ++ H + Q + G Y
Sbjct: 72 ---NPQAHCDRIVDEFKTLWDKLNISYDRFSRTSSERHQDIVKEFFQRVWEQGDIYLDQQ 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + + + ++ T + ++ + F L K +E +
Sbjct: 129 KGWYCVACEEFKEQRELTEEGYCQIHTNLKAEWKDEENYFFRLSKYQEKLEEFYRLNPEF 188
Query: 211 GRP 213
+P
Sbjct: 189 IQP 191
>gi|217962514|ref|YP_002341086.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
gi|229142350|ref|ZP_04270869.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
gi|226695275|sp|B7HVW2|SYM_BACC7 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|217064569|gb|ACJ78819.1| putative methionyl-tRNA synthetase [Bacillus cereus AH187]
gi|228641120|gb|EEK97432.1| Methionyl-tRNA synthetase 2 [Bacillus cereus BDRD-ST26]
Length = 544
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|125718503|ref|YP_001035636.1| methionyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|125498420|gb|ABN45086.1| Methionyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
Length = 666
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 30/180 (16%), Positives = 59/180 (32%), Gaps = 11/180 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGNATTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
>gi|153009409|ref|YP_001370624.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
gi|151561297|gb|ABS14795.1| methionyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 515
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 49/138 (35%), Gaps = 15/138 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNG--KDVFF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + + + +G Y+ +
Sbjct: 68 PRELADRNTAAFRQMADVLNSSNDDYIRTSEERHYKASQAIWKAMAGNGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFSRRKIDE 172
YG ++
Sbjct: 128 SVRDEAYYGEEETEVRED 145
>gi|260459472|ref|ZP_05807727.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
gi|259035026|gb|EEW36282.1| methionyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
Length = 517
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 44/402 (10%), Positives = 99/402 (24%), Gaps = 36/402 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D L R R K V + +T D+ K+++ A++E S
Sbjct: 19 PHIGHAYEVIATDALARFQRLDG--KQVFF---LTGTDEHGIKMLQTAKREGISA----- 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F + L H + + + +G Y+ +
Sbjct: 69 -RELADRNSADFKRMAAALNASNDDFIRTTEERHYASSQAIWKAMDANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSF------------SRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-E 201
YG + E + L++
Sbjct: 128 SVRDEAYYGEEETEVRADNVRYGPQGTPVEWVEEESYFFRLSAYQDKLIALYESQPDFIG 187
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHEN-EIAQSCCADRIEK 260
P ++ ++S + G +++ + + EK
Sbjct: 188 PAERRNEVMSFVKSGLKDLSISRTTFDWGVPVPGDEKHVMYVWVDALTNYITGVGYPDEK 247
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
++ G+ + + + + + R + +
Sbjct: 248 DEKWRFWPADAHIIGKDIVRFHAVYWPAFLMSAGIPLPKRVFGHGFLFNRGEKMSKSVGN 307
Query: 321 DFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ E L S T + +
Sbjct: 308 VIDPFTMVEHYGLDQVRYFFLREVPFGQDGSYSHEAIVNRTNADLAN-----GLGNLAQR 362
Query: 381 LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
L + + G+ + L + S +++ V K
Sbjct: 363 SLSMIAKNCG--GVVPKRGDLTEADSAILDQAVAALATARKA 402
>gi|16331573|ref|NP_442301.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2501033|sp|Q55729|SYM_SYNY3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|1001640|dbj|BAA10371.1| methionyl-tRNA synthetase [Synechocystis sp. PCC 6803]
Length = 532
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 17/185 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A +V D L R R + V IT D+ KI A +
Sbjct: 18 VNDVPHLGSAYTTVVADTLARFKRLQGYD-----VLMITGTDEHGQKIQRTAEAQELD-- 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ +F + L L R T H+ + Q + G Y A
Sbjct: 71 ----PQTHCDRTVVKFKELWRSLNIL-YDRFSRTTDPRHLAIVKDFFQRVWDKGDIYLAQ 125
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + + + ++ + F L + P+E +
Sbjct: 126 QQGWYCVACEEFKEKRDLLEDNHCPLHPNRKAEWRDEENYFFRLSRYQHPLEELYAQRPE 185
Query: 210 RGRPG 214
+P
Sbjct: 186 FIQPS 190
>gi|125974586|ref|YP_001038496.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|256004052|ref|ZP_05429037.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|125714811|gb|ABN53303.1| methionyl-tRNA synthetase [Clostridium thermocellum ATCC 27405]
gi|255991975|gb|EEU02072.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 2360]
gi|316941704|gb|ADU75738.1| methionyl-tRNA synthetase [Clostridium thermocellum DSM 1313]
Length = 654
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI +A+++ +
Sbjct: 17 DKLHIGHSYTTVAADAVARYKRLKGYD-----VMFLTGTDEHGQKIERKAKEKGVTPK-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + ++ K Q I+ + E
Sbjct: 70 QYVDEIVAG-IKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKSEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + + ++
Sbjct: 129 TPCESFWTKTQLVDGKCPDCGREVELTKEES 159
>gi|281419111|ref|ZP_06250128.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
gi|281407260|gb|EFB37521.1| methionyl-tRNA synthetase [Clostridium thermocellum JW20]
Length = 654
Score = 46.6 bits (109), Expect = 0.008, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 42/151 (27%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI +A+++ +
Sbjct: 17 DKLHIGHSYTTVAADAVARYKRLKGYD-----VMFLTGTDEHGQKIERKAKEKGVTPK-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + ++ K Q I+ + E
Sbjct: 70 QYVDEIVAG-IKELWKLLKITNDRFIRTTDPHHEKTVQKIFKKLYDQGDIYKSEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + + ++
Sbjct: 129 TPCESFWTKTQLVDGKCPDCGREVELTKEES 159
>gi|325972146|ref|YP_004248337.1| Lysyl-tRNA synthetase [Spirochaeta sp. Buddy]
gi|324027384|gb|ADY14143.1| Lysyl-tRNA synthetase [Spirochaeta sp. Buddy]
Length = 524
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 28 MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
+Y C G T HIGN R +I D++ R L+ K V ++
Sbjct: 27 VYTCASGITPSGTVHIGNFREIISVDLVVRALKAKG--KQVRFI 68
>gi|229087542|ref|ZP_04219674.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
gi|228695789|gb|EEL48642.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-44]
Length = 544
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 49/189 (25%), Gaps = 31/189 (16%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHVASLLPGDILARYYRAKG--EKVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ--------------MIYLIQNIIL 141
I ++F + L + T H + +
Sbjct: 66 -KEIADHYHEEFQRCFQHLGFTYDCYTRTDTQHHHETVQKIFLRLLEEDFIYKKTVEQAY 124
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + P+ SR + P +K E
Sbjct: 125 CETCTQFLPDRYVEG-ICPHCHEPSRGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 183
Query: 202 PGWESPWGR 210
+ +
Sbjct: 184 HFYFALHKF 192
>gi|206978214|ref|ZP_03239094.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|206743573|gb|EDZ55000.1| putative methionyl-tRNA synthetase [Bacillus cereus H3081.97]
Length = 544
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KDIADQYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|239942576|ref|ZP_04694513.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|239989037|ref|ZP_04709701.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291446038|ref|ZP_06585428.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291348985|gb|EFE75889.1| methionyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 537
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANDVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ G Y
Sbjct: 78 AWAD--KLVEEAWKPLWEHLNIAN--DDFIRTTEKRHTDRVQEFVQDLYDKGEIY 128
>gi|228942204|ref|ZP_04104744.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|228975133|ref|ZP_04135692.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228981772|ref|ZP_04142067.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
gi|228777884|gb|EEM26156.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis Bt407]
gi|228784654|gb|EEM32674.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228817538|gb|EEM63623.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
berliner ATCC 10792]
gi|326942856|gb|AEA18752.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 544
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I +K ++F + L T +H ++ + + +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPYCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|158523214|ref|YP_001531084.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
gi|158512040|gb|ABW69007.1| methionyl-tRNA synthetase [Desulfococcus oleovorans Hxd3]
Length = 640
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 51/459 (11%), Positives = 100/459 (21%), Gaps = 89/459 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS-- 89
V H+G+A I+ DV R + K V + +T D DKI++ A S
Sbjct: 14 VNAKPHLGHAYTTIMADVAARF--HAMAGKKVFF---LTGTDEHGDKIMKAAAARGVSPK 68
Query: 90 -------------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
++ + S+ +
Sbjct: 69 AYADTISALFRDLWTELDIGYSHFIRTTDENHKQVVSRVLAAIYEAGDIYFSEYEGLYCF 128
Query: 125 ATNHIPQMIYLIQNIILHGHA---YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
L+ F S + +
Sbjct: 129 GCERFYTERELVNGKCPDHDTPPERIQEANYFFKMSKYQQWLIDHITDNPDFIRPEGYRT 188
Query: 182 K--------------YHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYL 227
+ + D+ + + + +
Sbjct: 189 EILSFLKEPLDDLCISRPTSRLDWGIPLPFDDRYVTYVWFDALLNYVSALGYPDDDRYMT 248
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
H D+I PH A N +GF +E KMSKS GN +
Sbjct: 249 FWPAVQHLTAKDIIKPHGIYWPIMLKAAG--IPLYNHLNVHGFWQIESCKMSKSLGNVVN 306
Query: 288 INELLETKKFGGRSW-------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
++ T + + + + + R+
Sbjct: 307 PLDMKNTYGTDAFRYFLCREMSFGLDAGFSEEALVQRINADLANDLGNLFSRVLAMTAKY 366
Query: 335 SKWPQTSTSKGIIDPAVL-------------SALYNDLNTVSAIQALHKLARESTKNHDL 381
K + + P + A + A+ A+ L + D
Sbjct: 367 FKNRVPAADDANLPPCDIDIGALARTTVAAYEAQMATFHMNRALAAVWDLISAMNRFIDY 426
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ-ERLIL 419
+ ++ I L++ R++
Sbjct: 427 SAPWT--------LAKDPAKADALAAVIYTLLEGLRIVA 457
>gi|20905283|gb|AAM30563.1| Methionyl-tRNA synthetase [Methanosarcina mazei Go1]
Length = 749
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 50/169 (29%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R + D+ R L+ E VT+V D I+ A
Sbjct: 50 TCGL-PYANGKAHIGHLRTYVPADIYARSLKKEGRE--VTFVCG----SDTHGTPIVVNA 102
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
+ + + + + F + +L + + ++ +I
Sbjct: 103 EE------LGITPTELVEIYHKHFDETFKQLGIYFDAFGTTDDPENHNRTHDIVSRLIEK 156
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y EI + + T ++ +
Sbjct: 157 GYVYPKIIEIAYCPACNRFLPDRYVEGACPHCGETARGDECDQGCGKHL 205
>gi|239905442|ref|YP_002952181.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
gi|239795306|dbj|BAH74295.1| methionyl-tRNA synthetase [Desulfovibrio magneticus RS-1]
Length = 651
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 52/186 (27%), Gaps = 17/186 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D L R + + V + +T D DKI E A +
Sbjct: 13 VNAKPHLGHAYTTIVADALARF--HRLCGEDVFF---LTGTDEHGDKIAEAAAKAG---- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ F L T+HI + +Q + G Y
Sbjct: 64 --QTPKEYADAISGLFSSLWPDLGITPTRFIRTTDTDHIDAVRRALQLVYDKGDIYFGEY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ T +V Y + F + K + ++
Sbjct: 122 GGHYCTGCERFLTEKELVD--GLCPDHKVKPDYIAEKNYFFRMSKYQGQLLEHIKANPDF 179
Query: 211 GRPGWH 216
RP +
Sbjct: 180 IRPRQY 185
>gi|224373264|ref|YP_002607636.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
gi|223589648|gb|ACM93384.1| methionyl-tRNA synthetase [Nautilia profundicola AmH]
Length = 635
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 26/184 (14%), Positives = 47/184 (25%), Gaps = 19/184 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D++ R R + +T D+ KI E A++ S
Sbjct: 17 VNDIPHIGHAYTTIIADMVARYSRLKGIDTFF-----LTGTDEHGQKIEEAAKKRGKSPK 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ I+ K + + + H + ++ G Y+
Sbjct: 72 --EYADEISGKFKALWDE---FEISYDKFIRTTDEAHKKGVQKAFLDMYKKGDIYKDYYE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
S ++ K + W
Sbjct: 127 GHYCVSCESFVAPSQLVNDELCPDCGKPTRIIKEESYFFRLS----KYQDQLLDWLKNKK 182
Query: 210 RGRP 213
P
Sbjct: 183 PILP 186
>gi|56418566|ref|YP_145884.1| methionyl-tRNA synthetase [Geobacillus kaustophilus HTA426]
gi|56378408|dbj|BAD74316.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Geobacillus
kaustophilus HTA426]
Length = 650
Score = 46.6 bits (109), Expect = 0.009, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 17 DRLHIGHAYTTVAGDAMARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + Q+ + + E
Sbjct: 70 QYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|328551739|gb|AEB22231.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens TA208]
gi|328909999|gb|AEB61595.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens LL3]
Length = 663
Score = 46.6 bits (109), Expect = 0.010, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A +E N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEEE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + K +L + H + + Q ++ +G Y E +
Sbjct: 71 QAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 IPDETFYTE 139
>gi|297528406|ref|YP_003669681.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
gi|297251658|gb|ADI25104.1| methionyl-tRNA synthetase [Geobacillus sp. C56-T3]
Length = 650
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 17 DRLHIGHAYTTVAGDAMARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + Q+ + + E
Sbjct: 70 QYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|261417531|ref|YP_003251213.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|319765188|ref|YP_004130689.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
gi|261373988|gb|ACX76731.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC61]
gi|317110054|gb|ADU92546.1| methionyl-tRNA synthetase [Geobacillus sp. Y412MC52]
Length = 650
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 43/151 (28%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 17 DRLHIGHAYTTVAGDAMARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + Q+ + + E
Sbjct: 70 QYVDEIVAGIQELWKKLDISYDDFIRTTQERHKKVVEQIFTRLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|308171929|ref|YP_003918634.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
gi|307604793|emb|CBI41164.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens DSM 7]
Length = 663
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A +E N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEEE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + K +L + H + + Q ++ +G Y E +
Sbjct: 71 QAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 IPDETFYTE 139
>gi|329935921|ref|ZP_08285723.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
gi|329304612|gb|EGG48488.1| methionyl-tRNA synthetase [Streptomyces griseoaurantiacus M045]
Length = 547
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 39/115 (33%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANGVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++T + + H ++ +Q++ G Y
Sbjct: 78 AWAD-KLVTEAWE-PLWEHLDIAN--DDFIRTTQKRHTDRVQEFVQDLHDKGEIY 128
>gi|297616267|ref|YP_003701426.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
gi|297144104|gb|ADI00861.1| methionyl-tRNA synthetase [Syntrophothermus lipocalidus DSM 12680]
Length = 646
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 36/278 (12%), Positives = 68/278 (24%), Gaps = 24/278 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI AR +
Sbjct: 18 DNLHIGHAYTTVAADCIARYKRMQGYD--VFF---LTGSDEHGQKIERTARDKGME---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ F L H + + Q + G Y+A E
Sbjct: 69 --PKAYVDRIVDGFKVLWDTLLISHNDFIRTTEERHEKAVQTIFQKVYEKGDIYKAKYEG 126
Query: 153 IFDTSSIPNYGSFS----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ T + + ++ + E Y + P + P
Sbjct: 127 WYCTPCEAFWTERQLVDGKCPDCDRPVELTQEESYFFAMSKYAERLLKHIEENPDFIQPE 186
Query: 209 GRGRPGWH-----IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
R + +E +S I +I+ + + +
Sbjct: 187 SRRNEMINFIKSGLEDLCVSRTTFEWGIPIPFAPGHVIYVWFDALVNYLTAVGYPDDQEK 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
+ K I L+ +
Sbjct: 247 FGKYWPADVHLVGKDIVRFHTVIWPTILMAADLPLPKQ 284
>gi|195446223|ref|XP_002070684.1| GK10894 [Drosophila willistoni]
gi|194166769|gb|EDW81670.1| GK10894 [Drosophila willistoni]
Length = 581
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 27/188 (14%), Positives = 53/188 (28%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R + V T D+ KI + A +P
Sbjct: 30 VNAAPHIGHLYSAVIADAHCRYQRLRHPNADVLLC---TGTDEHGTKIQQAAA--GHKVP 84
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+ + F + + H + + + + +GH Y A +
Sbjct: 85 VGQYCDEISQRYRDVFQAAHIQ---NDDFIRTTEERHKQAVSHFWRKLHDNGHIYSAAYS 141
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ + S R + + +++ + W
Sbjct: 142 GWYCVSDEVFLTDSQLRLDEASGMRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 201
Query: 209 GRGRPGWH 216
R RP
Sbjct: 202 ARIRPAKF 209
>gi|328883600|emb|CCA56839.1| Methionyl-tRNA synthetase [Streptomyces venezuelae ATCC 10712]
Length = 535
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 20/115 (17%), Positives = 38/115 (33%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANDVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + + H ++ +Q++ Y
Sbjct: 78 A--WCDKLVEEAWKPLWEHLNIAN--DDFIRTTQKRHTDRVQEFVQDLYDKDEIY 128
>gi|323490978|ref|ZP_08096172.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
gi|323395334|gb|EGA88186.1| methionyl-tRNA synthetase [Planococcus donghaensis MPA1U2]
Length = 652
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 42/150 (28%), Gaps = 15/150 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A + +
Sbjct: 22 HIGTAYTTVASDAMARYKRLRGFD--VRF---LTGMDEHGQKIEEKANEAGKAPQEFVDE 76
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--ANNEIIF 154
+K + + H + + + + +G Y+
Sbjct: 77 MAAAAKQVWSVMDI-----TYDDFIRTTEERHKEGVERIFKTFLDNGDIYKGEYEGWYCT 131
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + + ++
Sbjct: 132 PCESFFTENQLENGNCPDCGRPVQKVKEES 161
>gi|186476942|ref|YP_001858412.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|184193401|gb|ACC71366.1| methionyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 726
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD I+ +A QE +
Sbjct: 39 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPIMLKAEQEGIT----- 87
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPR---------ATNHIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + + + A
Sbjct: 88 -PKQLIDRVWQEHKRDFDNFGISFDNYYSTDSEENRVLSESIYTALQAAGLIEARDIEQA 146
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 147 YDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYQPTELINPY 193
>gi|154684557|ref|YP_001419718.1| methionyl-tRNA synthetase [Bacillus amyloliquefaciens FZB42]
gi|154350408|gb|ABS72487.1| MetS [Bacillus amyloliquefaciens FZB42]
Length = 663
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 43/129 (33%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A +E N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEEE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + K +L + H + + Q ++ +G Y E +
Sbjct: 71 QAYVDRAVAEIQKLWKQLDISHDDFIRTTESRHKEIIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 IPDETFYTE 139
>gi|86609674|ref|YP_478436.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
gi|86558216|gb|ABD03173.1| methionyl-tRNA synthetase [Synechococcus sp. JA-2-3B'a(2-13)]
Length = 518
Score = 46.2 bits (108), Expect = 0.010, Method: Composition-based stats.
Identities = 56/334 (16%), Positives = 85/334 (25%), Gaps = 70/334 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +V D + R R K V V T D+ KI A + P
Sbjct: 15 VNAAPHIGSAYTTLVADAIARYHRLRG--KDVLMV---TGTDEHGQKIQRTAEERGI--P 67
Query: 92 INDAISIITS-----------------KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + + T K R Q Q Y
Sbjct: 68 PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTNPRHKAIVREFFQRVWDQGDIFIGRQQGWY 127
Query: 135 LIQNIILHGHAYEANNEIIF----------DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ A D + S + K++ +
Sbjct: 128 CVACEEFKDEAELLEGGFCPLHPTKKVEWKDEENYFFRLSRYQEKLEALYAEHPEFIQPE 187
Query: 185 KKNPADFILWK------RSTPMEPGWESPWG-------RGRPGWHIECSAMSSHYLGKVF 231
+ K + W P+ I + + +
Sbjct: 188 SRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPGQTLYVWFDALINYISAALDPDDEPT 247
Query: 232 -----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
D+H G D++ H A A +GFL +G KMSK
Sbjct: 248 LANALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAG--LPLPKQVFGHGFLTKDGLKMSK 305
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
S GN + EL+ + + A +R L
Sbjct: 306 SLGNTVDPFELV-------QQYGADAVRYYFLTE 332
>gi|228961279|ref|ZP_04122898.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
gi|228798400|gb|EEM45394.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar
pakistani str. T13001]
Length = 544
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 48/167 (28%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRSKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F + L T +H ++ + + +
Sbjct: 66 -KEIADQYHEEFQRCFRSLGFTYDCYTRTDSEHHHETVQNVFLRLLEEGHIYKKTVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCK 171
>gi|258542241|ref|YP_003187674.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
gi|256633319|dbj|BAH99294.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-01]
gi|256636378|dbj|BAI02347.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-03]
gi|256639431|dbj|BAI05393.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-07]
gi|256642487|dbj|BAI08442.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-22]
gi|256645542|dbj|BAI11490.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-26]
gi|256648595|dbj|BAI14536.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-32]
gi|256651648|dbj|BAI17582.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256654639|dbj|BAI20566.1| methionyl-tRNA synthetase [Acetobacter pasteurianus IFO 3283-12]
Length = 512
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 24/136 (17%), Positives = 39/136 (28%), Gaps = 15/136 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I DV+ R + V + +T D+ K+ + A+
Sbjct: 14 VNGAPHIGHAYTSIAADVMARF--HRLAGDEVFF---LTGTDEHGQKVEQAAQANGTDA- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
K + F + HI L + + +G Y
Sbjct: 68 -----KSFADKVSADFRNMADAMNISYDDFIRTTEPRHITSTQALWKKVADNGAIYLGAY 122
Query: 151 EIIFDTSSIPNYGSFS 166
E + YG
Sbjct: 123 EGWYALRDECFYGEDE 138
>gi|258513470|ref|YP_003189692.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
gi|257777175|gb|ACV61069.1| methionyl-tRNA synthetase [Desulfotomaculum acetoxidans DSM 771]
Length = 533
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 22/151 (14%), Positives = 46/151 (30%), Gaps = 10/151 (6%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D R R + V + +T D+ KI A+++ S
Sbjct: 17 DKLHIGHAYTTVAADSFARYKRMKGYD--VWF---LTGSDEHGQKIERTAKEKGQSPL-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + I + + K T Q R + + + + A +
Sbjct: 70 EYVDQIVAGFKSLWKKLDVSYDDFIRTTQERHKKVVQDIFQKLYDQGDIYKAQYEGHYCT 129
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ Y + + + ++
Sbjct: 130 PCETFWTEYQLDADGNCPDCGRPVEILQEES 160
>gi|226365134|ref|YP_002782917.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
gi|226243624|dbj|BAH53972.1| methionyl-tRNA synthetase [Rhodococcus opacus B4]
Length = 519
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 47/161 (29%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D L R R + V + +T D+ K+ + A +E +
Sbjct: 26 PHIGHAYEYISSDALARFKRLDGFD--VYF---MTGTDEHGLKMQQTAAKEGIDV----- 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ F L +H + Q ++ G Y +
Sbjct: 76 -RELAARNSDVFEAMDKTLNISFDRFIRTTDADHEEASKAIWQRMLEAGDIYLDTYSGWY 134
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y ++ + + +K
Sbjct: 135 SVRDEAFYTEAETTLQEDGSRLSTETGTPVEWTEESTYFFK 175
>gi|218900185|ref|YP_002448596.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
gi|226695273|sp|B7INU9|SYM_BACC2 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|218544443|gb|ACK96837.1| putative methionyl-tRNA synthetase [Bacillus cereus G9842]
Length = 544
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANNEIIF 154
I +K ++F + L + + H + + + ++ G+ Y+ E +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 155 DTSSIPNYGSFSRRKIDEQK---MGTRVPEKYHKKNPADFILWKRST 198
+ I + +L K
Sbjct: 125 CKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCK 171
>gi|307243786|ref|ZP_07525918.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
gi|306492840|gb|EFM64861.1| methionine--tRNA ligase [Peptostreptococcus stomatis DSM 17678]
Length = 646
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 114/415 (27%), Gaps = 83/415 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS--IPIND 94
HIG+A I D + R R+ + V + +T D +KI ++A + S +++
Sbjct: 21 HIGHAYTTIAADAIARFKRFCGYD--VRF---LTGTDEHGEKIQKKAHEAGKSEIEFLDE 75
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ----------------------M 132
I+ I + + + + H+ +
Sbjct: 76 QIAEIKKLWEKLEISNDDFIRTTEERHEKAIQKIFTKLYEKGEIYKGSYEGHYCVPCESF 135
Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Q + + + S S + ++ + T +KN
Sbjct: 136 WTESQMLEGNKCPDCGRETKVVKEESYFFRLSKYQDRLMDLFQNTDFVMPESRKNEMIKN 195
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIE-----------CSAMS------------SHYLGK 229
+ + + G E C+ ++ +
Sbjct: 196 FLEPGLEDLSVTRTSFDWGIKVPFDEKHIIYVWVDALCNYITALGYEGDDDTNYKKFW-- 253
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H +++ H A D +G++ KMSKS GN +
Sbjct: 254 PADVHLVAKEIVRFHTIIWPALLMALD--IPVPKRVFGHGWILFADDKMSKSKGNIVYPG 311
Query: 290 ELLETKKFGGRSWPAPVIRLAML--MTHYREPIDFTVQRLT-----------------EA 330
++++ + +R I+ L
Sbjct: 312 QMVDRYGVDALKYFLLREFSFGQDGSYTHRNFINRINSDLANDLGNLVSRTISMVEKYNE 371
Query: 331 EILLSKWPQTSTSKGIIDPAV-----LSALYNDLNTVSAIQALHKLARESTKNHD 380
+L+ T + +ID N+L A+++L K R + K D
Sbjct: 372 GVLVVNDAGTEFDQDLIDTYREVRADFEGQMNELMFHEALESLWKFVRRTNKYID 426
>gi|268610250|ref|ZP_06143977.1| methionyl-tRNA synthetase [Ruminococcus flavefaciens FD-1]
Length = 661
Score = 46.2 bits (108), Expect = 0.011, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 49/161 (30%), Gaps = 19/161 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ + D + R R + V +T D+ KI ++A ++ + +
Sbjct: 19 PHIGHCYTTVACDSIARYKRMQGYD-----VMFLTGTDEHGLKIEQKAAEQGVTPK--EY 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYE--ANNE 151
+ +I + + + ++ R T H+ + + + + G+ Y+ + +
Sbjct: 72 VDVIVDRFKNLW-----KYMNISYDRYIRTTDDYHVEAVQKIFKALYDKGYIYKGEYSGK 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
S + K
Sbjct: 127 YCTLCESFWTDSQLDENGCCPECHRPVKYAKEEAYFFKMSP 167
>gi|229917422|ref|YP_002886068.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
gi|229468851|gb|ACQ70623.1| methionyl-tRNA synthetase [Exiguobacterium sp. AT1b]
Length = 653
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYTTVAGDAIARYKRLKGFD--VRY---LTGTDEHGQKIQEKAKEAGVTPQAFVD- 73
Query: 97 SIITSKN---TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + + + H+ + + +I L +
Sbjct: 74 -EVVEEIKVLWDRLEISYDDYIRTTEDRHKKVVEHVFETLLKNGDIYLGEY----EGWYS 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ K + + +
Sbjct: 129 VPDETYYTESQLVDGKSPDSGHPVELVREEC 159
>gi|239917380|ref|YP_002956938.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|281414136|ref|ZP_06245878.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
gi|239838587|gb|ACS30384.1| methionyl-tRNA synthetase [Micrococcus luteus NCTC 2665]
Length = 541
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 16/169 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + +T D+ K+ + A+Q+ S
Sbjct: 21 PHIGHAYEYIATDAMARFQRLDG--RDVRF---LTGTDEHGQKMEQTAQQQGVSAL---- 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ ++N F + + ++ R T+H + + + + +G Y +
Sbjct: 72 --ELATRNAAVFKEMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLGSYAGW 129
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ +G + + ++ S +P
Sbjct: 130 YSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQP 178
>gi|75760133|ref|ZP_00740193.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228903536|ref|ZP_04067659.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
gi|74492370|gb|EAO55526.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
israelensis ATCC 35646]
gi|228856112|gb|EEN00649.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis IBL 4222]
Length = 544
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANNEIIF 154
I +K ++F + L + + H + + + ++ G+ Y+ E +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 155 DTSSIPNYGSFSRRKIDEQK---MGTRVPEKYHKKNPADFILWKRST 198
+ I + +L K
Sbjct: 125 CKTCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKTCK 171
>gi|256810012|ref|YP_003127381.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
gi|256793212|gb|ACV23881.1| methionyl-tRNA synthetase [Methanocaldococcus fervens AG86]
Length = 650
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 26/137 (18%), Positives = 42/137 (30%), Gaps = 16/137 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+AR I D++ + L+ E +V TD + I A +E S
Sbjct: 17 HLGHARSTYIPADIMCKYLKLRGEEA--IHVGG-TDNHGV--PITLTAEKEGKS------ 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
I K + +D L + HI + +G+ YE E +
Sbjct: 66 PEEIVEKYHNEIKEDLDLLGVEFDAFGKTHSQIHIETAQEFYLKLKENGYIYEKEIEQFY 125
Query: 155 DTSSIPNYGSFSRRKID 171
I
Sbjct: 126 CPKCKKFLPDRYVEGIC 142
>gi|224417704|ref|ZP_03655710.1| methionyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
Length = 607
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 35/264 (13%), Positives = 63/264 (23%), Gaps = 25/264 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R + + V + +T D+ KI + A +
Sbjct: 14 VNDVPHIGHAYTTIIADTLARY--HRIQNEEVWF---LTGTDEHGQKIQQSAEKN----- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
N + + +F + H + + + G Y+
Sbjct: 64 -NKNPKEYVDEISAKFKNLWDSFGISYDAFIRTTDSYHKESVRNVFSKMFKKGDIYKGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K K W
Sbjct: 123 EGNYCISCESFFAKSQLINHKNCPDCGKETNLLKEESYFFKLS----AYEDRLLQWIESN 178
Query: 209 GRGR-PGWHIECSAMSSHYLGKVFDIHGGGLD---LIFPHHENEIAQSCCADRIEKTANI 264
P + I D + E+ ++ ++ N
Sbjct: 179 PDCILPRMRRNEVINFIKEGLEDLSITRTSFDWGIKLPSEIESNDSKFVMYVWLDALVNY 238
Query: 265 WIHNGFLNLEGRKMSKSNGNFITI 288
G+ N + KM N+ +
Sbjct: 239 LSALGYENSKENKMEFWPANYHLV 262
>gi|195392274|ref|XP_002054784.1| GJ22603 [Drosophila virilis]
gi|194152870|gb|EDW68304.1| GJ22603 [Drosophila virilis]
Length = 583
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 26/188 (13%), Positives = 51/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R + E+ V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRHPERRVRLC---TGTDEHGTKIQQAAAAHKV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ ++++ F + H + + ++ GH Y A +
Sbjct: 84 VGQYCDEVSARYRDVFGAAGIE---HDDFIRTTEQRHKQAVAHFWHSLQSRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ + W
Sbjct: 141 GWYCVSDETFLTESQLRLDATSGTRYSLESGHPVEWTEETNYMFRLSQFQDDVQHWVKQK 200
Query: 209 GRGRPGWH 216
RP
Sbjct: 201 ACIRPAKF 208
>gi|219111573|ref|XP_002177538.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217412073|gb|EEC52001.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 345
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
I L+ ERL ++F+ AD IR LESKG +
Sbjct: 187 EEKINALLAERLQCKLSRRFADADRIRDLLESKGVYV 223
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES-KGFILEDYKNPDNGQRMTRWK 458
+ L+ RL KM++F AD I +L G + R W+
Sbjct: 102 EKVHALLASRLQAKKMRQFDEADNICDELLRVHGVTV--------WDRDKTWR 146
>gi|219114111|ref|XP_002176232.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217402807|gb|EEC42785.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 350
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 15/37 (40%), Positives = 20/37 (54%)
Query: 406 SIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
I L+ ERL ++F+ AD IR LESKG +
Sbjct: 187 EEKINALLAERLQCKLSRRFADADRIRDLLESKGVYV 223
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 15/29 (51%)
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLES 437
IE L+ R + + + + AD I+ L+
Sbjct: 272 IENLLARRSLARQNQNYKLADGIQDDLKK 300
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 20/53 (37%), Gaps = 9/53 (16%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES-KGFILEDYKNPDNGQRMTRWK 458
+ L+ RL KM++F AD I +L G + R W+
Sbjct: 102 EKVHALLASRLQAKKMRQFDEADNICDELLRVHGVTV--------WDRDKTWR 146
>gi|291530000|emb|CBK95585.1| methionyl-tRNA synthetase [Eubacterium siraeum 70/3]
Length = 642
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 17/151 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ + D + R R + V +T D+ KI +A ++ +
Sbjct: 18 PHIGHCYTTVACDTIARFKRMQGYD-----VMFLTGTDEHGQKIELKAAEKGVT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEI 152
+ F + + HI + + + + G+ Y+ +
Sbjct: 67 PKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFRKLYEKGYIYKGTYKGKY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + + +
Sbjct: 127 CTPCESFWTESQLVDGKCPDCGREVKEANEE 157
>gi|228968150|ref|ZP_04129153.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228791542|gb|EEM39141.1| Methionyl-tRNA synthetase 2 [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 116
Score = 46.2 bits (108), Expect = 0.012, Method: Composition-based stats.
Identities = 21/101 (20%), Positives = 38/101 (37%), Gaps = 16/101 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
I +K ++F + L + + H + + +
Sbjct: 66 -KEIANKYHEEFQRCFRDLGFTYDCYTRTDSEHHHETVQKV 105
>gi|291556883|emb|CBL34000.1| methionyl-tRNA synthetase [Eubacterium siraeum V10Sc8a]
Length = 642
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 42/151 (27%), Gaps = 17/151 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ + D + R R + V +T D+ KI +A ++ +
Sbjct: 18 PHIGHCYTTVACDTIARFKRMQGYD-----VMFLTGTDEHGQKIELKAAEKGVT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEI 152
+ F + + HI + + + + G+ Y+ +
Sbjct: 67 PKEYVDEIVANFKRLWETMHISYDRFIRTTDDYHIETVQKIFKKLYEKGYIYKGTYKGKY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + + +
Sbjct: 127 CTPCESFWTESQLVDGKCPDCGREVKEANEE 157
>gi|296807197|ref|XP_002844184.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238843667|gb|EEQ33329.1| methionine-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 588
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-GEKCVTYVRNITDIDD---KIIERARQEHPSI 90
V HIG+ +++ D+L R G+ + +T D+ KI + A Q
Sbjct: 60 VNAAPHIGHLYTILIADILKRWQVLLGNGDAKL-----LTGTDEHGMKIQQAALQNGLE- 113
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN 149
+ +N + F + H + + +N+ G+ YE
Sbjct: 114 -----PQALCDRNCKTFKTLAKEANVSHDHFIRTTDSAHKSAVQFFWENLNHRGYIYEGK 168
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQ 173
+E + S Y + + +
Sbjct: 169 HEGWYSVSDETFYPASAVHSTLDP 192
>gi|229579473|ref|YP_002837871.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284998118|ref|YP_003419885.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
[Sulfolobus islandicus L.D.8.5]
gi|228010187|gb|ACP45949.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus Y.G.57.14]
gi|284446013|gb|ADB87515.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
[Sulfolobus islandicus L.D.8.5]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|21222203|ref|NP_627982.1| methionyl-tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|256786707|ref|ZP_05525138.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
gi|289770602|ref|ZP_06529980.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
gi|25009395|sp|Q9F2I9|SYM_STRCO RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|10432496|emb|CAC10330.1| putative methionyl tRNA synthetase [Streptomyces coelicolor A3(2)]
gi|289700801|gb|EFD68230.1| methionyl-tRNA synthetase [Streptomyces lividans TK24]
Length = 538
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 40/115 (34%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAEANGVTPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
++T + + + H ++ +Q++ G Y
Sbjct: 78 AWAD-KLVTESW-KPLWEHLDIAN--DDFIRTTQKRHTDRVQEFVQDLYDKGEIY 128
>gi|229020277|ref|ZP_04177046.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
gi|229026501|ref|ZP_04182856.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
gi|228734809|gb|EEL85449.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1272]
gi|228741030|gb|EEL91259.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH1273]
Length = 544
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PITIRAKQEGVTV----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K ++F + L T +H ++ + + +
Sbjct: 66 -KEVADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGLCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|229581840|ref|YP_002840239.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228012556|gb|ACP48317.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus Y.N.15.51]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|303238222|ref|ZP_07324758.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
gi|302594268|gb|EFL63980.1| tRNA synthetase class I (M) [Acetivibrio cellulolyticus CD2]
Length = 176
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 27/156 (17%), Positives = 46/156 (29%), Gaps = 18/156 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ ++ D+L R R V YV D I RA +E S
Sbjct: 17 HIGHIAALLPGDILARYFRLKGY--NVCYVSG----SDCHGTPIQIRANKEGVS------ 64
Query: 96 ISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEAN-NEII 153
I ++ F +L +Q H + N++ G+ Y+ +
Sbjct: 65 PEQIANRYHNDFKGCFDKLGFSYDLYNQTNDPYHSSFVQDFFTNLLNSGYIYKKTIEQAY 124
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
++ F K + H+
Sbjct: 125 CESCDQFLPDRFVVGKCPNCGFYWDILHLTHQDKYM 160
>gi|18977752|ref|NP_579109.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
gi|23822193|sp|Q8U149|SYR_PYRFU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|18893491|gb|AAL81504.1| arginyl-tRNA synthetase [Pyrococcus furiosus DSM 3638]
Length = 629
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR I+ D + R+LR+ + V +N IDD
Sbjct: 135 HMGHARNAILGDTVARILRFLGYQVEV---QNY--IDD 167
>gi|238620094|ref|YP_002914920.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|238381164|gb|ACR42252.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus M.16.4]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|227827868|ref|YP_002829648.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|229585136|ref|YP_002843638.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|227459664|gb|ACP38350.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus M.14.25]
gi|228020186|gb|ACP55593.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus M.16.27]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|323477689|gb|ADX82927.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Sulfolobus
islandicus HVE10/4]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|323474954|gb|ADX85560.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Sulfolobus
islandicus REY15A]
Length = 934
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 51/181 (28%), Gaps = 36/181 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT--------------DID------ 76
H+G+ R + DV R LR + T D+D
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYNVLFPFAFQFTGTPVLAIADSIRRGDVDMIEFFK 104
Query: 77 -------DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
DKI ++ + + KNT + + + T R I
Sbjct: 105 SVYGVPEDKI----KELGDPYKLAEYFKE-EMKNTAKSIGMSIDWRRSFTTTDTRFEKFI 159
Query: 130 PQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ ++ + G+ ++ + + P +R I+ + V ++
Sbjct: 160 HWQLRKLKEL---GYLVTEDDVVGYCPNDNFPVGMHDTRGDIEPEITTMNVILFEGSESY 216
Query: 189 A 189
Sbjct: 217 N 217
>gi|323454450|gb|EGB10320.1| expressed protein [Aureococcus anophagefferens]
Length = 363
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 22/56 (39%), Gaps = 9/56 (16%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES-KGFILEDYKNPDNGQRMTRWKQKP 461
A+ L+ ERL + + F AD +R +L G + R W +P
Sbjct: 79 DAVNGLLAERLDAKRDRNFPRADELRDELMRTHGVRV--------WDRERTWSAQP 126
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 19/42 (45%), Gaps = 1/42 (2%)
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLE-SKGFILEDY 445
A++ L+ R+ + F AD +R++L G + D
Sbjct: 155 DETAVDALLLARMHAKMGRDFGRADALREELSRDHGVRVHDG 196
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 21/48 (43%), Gaps = 1/48 (2%)
Query: 400 HLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ-LESKGFILEDYK 446
A+++L+ +R L +KF AD IR L ++D K
Sbjct: 292 EDAGVDVDAVQRLIAKRSRLKLRRKFHEADGIRDALLAEHNVHIDDKK 339
>gi|283954731|ref|ZP_06372248.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
gi|283793784|gb|EFC32536.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 414]
Length = 530
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARSAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|83588921|ref|YP_428930.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|83571835|gb|ABC18387.1| methionyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 651
Score = 45.8 bits (107), Expect = 0.013, Method: Composition-based stats.
Identities = 57/426 (13%), Positives = 107/426 (25%), Gaps = 94/426 (22%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D L R R + V + +T D+ KI +AR+ N
Sbjct: 17 DKLHIGHALTTTMADTLARYKRLRGYD--VYF---LTGSDEHGQKIQRKARE------AN 65
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--ANN 150
+ F + RL H + L+Q I G Y+
Sbjct: 66 LEPIQYVDRIVATFQELWRRLNISYNDFIRTTEPRHARVVQALLQKIYDQGDIYKSTYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGWE-- 205
+ + + ++ L + +
Sbjct: 126 WYCTPCETFWTERQLVDGNCPDCGRPVELVKEESYFFRMSKYADRLLQYIKDHPDFIQPV 185
Query: 206 ---------------------SPWGRGRP-----------------------GWHIECSA 221
+ + G P G+
Sbjct: 186 TRRNEMISFIEGGLEDLCISRTTFDWGIPVPMDPKHVIYVWFDALTNYISALGYGTADDH 245
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ Y +H G D++ H A IE ++ +G+L ++G KMSKS
Sbjct: 246 LFRKYW--PAAVHLVGKDIV-RFHTIIWPIILMAAGIEPPRQVF-GHGWLLVDGGKMSKS 301
Query: 282 NGNFITINELLETKKFGGRS--------------WPAPVIRLAMLMTHYREPIDFTVQRL 327
GN + L++ + + + + +
Sbjct: 302 RGNVVDPMILIDRYGSDAIRYFLLREMPYGADGYYSEEALINRYNTDLANDFGNLLSRTT 361
Query: 328 TEAEILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTK 377
E ++ +D P + N A+ A+ +L + K
Sbjct: 362 AMIEKFNGGVIDPPSAPEPLDEELKNLAAGIPDEVDNALNHYEFARALAAIWRLVNRANK 421
Query: 378 NHDLLP 383
+
Sbjct: 422 YIEETA 427
>gi|315931151|gb|EFV10124.1| Methionine-tRNA ligase [Campylobacter jejuni subsp. jejuni 327]
Length = 187
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFVKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKNTTILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|229118509|ref|ZP_04247863.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
gi|228665079|gb|EEL20567.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock1-3]
Length = 544
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PITIRAKQEGVTVV---- 66
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 67 --EIADKYHEEFERCFHSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGVCPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|308809157|ref|XP_003081888.1| CG3048-PA, isoform A (ISS) [Ostreococcus tauri]
gi|116060355|emb|CAL55691.1| CG3048-PA, isoform A (ISS) [Ostreococcus tauri]
Length = 775
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 42/328 (12%), Positives = 74/328 (22%), Gaps = 22/328 (6%)
Query: 105 QQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
+ + A H+ A + + + G
Sbjct: 373 ECGFRQRRCWYPHATRHEATARDDSRAGRDYCGYMTTKFAYAAHAATCEWRAEKCDVVGC 432
Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSS 224
+++ R K P E G + +++C +
Sbjct: 433 EEMVPHCKREQHVRTCPKARVSCPNACEW-----EGERGDLATHRASCEREYVKCEFIDL 487
Query: 225 HYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
+HG LI H + C + N+ I+ ++ K +
Sbjct: 488 EREHGAGCMHGCERALIEAHRHECDFRPWCC----PSCNLVINAINASVHAMKCGDARQR 543
Query: 285 FITINELLETKKFGGRSWP---APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
++ F + A RE R E E
Sbjct: 544 CPRCRAMVREAAFKAHTEHFCAGSATSCAYASFGCREQGTREELRQHERESAPRHLRLVV 603
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL 401
S L A+ + T F S I IE + HL
Sbjct: 604 KSLDDERSKGLKQAKIIERMEKALTKFGEDYSNLTSKAAERVKFVESRAIEQIETLQAHL 663
Query: 402 N----------KNISIAIEKLVQERLIL 419
+ ++ I+KL ER
Sbjct: 664 EANKRAYEEHVEALNEEIDKLKAERDAA 691
>gi|70606212|ref|YP_255082.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|76363440|sp|Q4JBP0|SYL1_SULAC RecName: Full=Leucyl-tRNA synthetase 1; AltName:
Full=Leucine--tRNA ligase 1; Short=LeuRS 1
gi|68566860|gb|AAY79789.1| leucyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
Length = 942
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R I D+ R LR
Sbjct: 46 HIGHGRTYITADIYARYLRMKGYN 69
>gi|315032441|gb|EFT44373.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0017]
Length = 677
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 29 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 77
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 78 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 137
Query: 156 TSSIPNYGS 164
S +
Sbjct: 138 VSDEEFFTE 146
>gi|224009692|ref|XP_002293804.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
gi|220970476|gb|EED88813.1| methionyl-trna synthetase [Thalassiosira pseudonana CCMP1335]
Length = 579
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 24/131 (18%), Positives = 42/131 (32%), Gaps = 9/131 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R + V ++ TD + E + N
Sbjct: 73 VNDKPHIGHAYTSLACDVIARYMRLSG--RDVFFLSG-TD-----EHGQKVETTAKNANM 124
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ F + T L +H + +L ++ G Y + E
Sbjct: 125 EPLAFCDMVSASFKELLTLLNISNDEFIRTTDEDHKKAVQHLWNVLVEKGAIYLGSYEGW 184
Query: 154 FDTSSIPNYGS 164
+ Y
Sbjct: 185 YSVRDECYYNE 195
>gi|27352779|dbj|BAC49781.1| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
Length = 658
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D L R R K V + +T D+ K+I+ A+ E +
Sbjct: 163 PHIGHAYEAIATDTLARFARLDG--KDVFF---LTGTDEHGLKMIQTAQNEGLT------ 211
Query: 96 ISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
S + ++N +F RL + H + + + +G Y +
Sbjct: 212 PSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAGWY 271
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 272 SVRDEAYYAEDE 283
>gi|87124495|ref|ZP_01080344.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
gi|86168067|gb|EAQ69325.1| methionyl-tRNA synthetase [Synechococcus sp. RS9917]
Length = 514
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 19/164 (11%), Positives = 39/164 (23%), Gaps = 19/164 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I D L R R + V +V T +D+ KI A ++
Sbjct: 12 VNDRPHLGSTYTTIACDALARFQRLEG--ETVLFV---TGVDEHGQKIQRTAAEQGIE-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNIILHGHAYE 147
+ T ++++ + PR + +
Sbjct: 65 ----PREHCDRITARYLEAWRQWGISNDRFVRTTEPRHRPLVQAFFQRCEAAGDIRSG-R 119
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + ++
Sbjct: 120 QTGWYCVGCEEFKDEPAEAKEPCCPLHQKPLEWRDEENLFFCLS 163
>gi|227517850|ref|ZP_03947899.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|227555041|ref|ZP_03985088.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|229546775|ref|ZP_04435500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|229548866|ref|ZP_04437591.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|293383808|ref|ZP_06629715.1| methionine--tRNA ligase [Enterococcus faecalis R712]
gi|293388716|ref|ZP_06633209.1| methionine--tRNA ligase [Enterococcus faecalis S613]
gi|307268005|ref|ZP_07549393.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|307271930|ref|ZP_07553198.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|307275347|ref|ZP_07556490.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|307278375|ref|ZP_07559450.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|307290946|ref|ZP_07570836.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|312901528|ref|ZP_07760801.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
gi|312904490|ref|ZP_07763649.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|312906976|ref|ZP_07765972.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|312952803|ref|ZP_07771665.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|312978767|ref|ZP_07790494.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|227074693|gb|EEI12656.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0104]
gi|227175828|gb|EEI56800.1| methionyl-tRNA synthetase [Enterococcus faecalis HH22]
gi|229305887|gb|EEN71883.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 29200]
gi|229308124|gb|EEN74111.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1322]
gi|291078884|gb|EFE16248.1| methionine--tRNA ligase [Enterococcus faecalis R712]
gi|291081873|gb|EFE18836.1| methionine--tRNA ligase [Enterococcus faecalis S613]
gi|306498016|gb|EFM67543.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0411]
gi|306504881|gb|EFM74076.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0860]
gi|306507981|gb|EFM77108.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2134]
gi|306511436|gb|EFM80438.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0855]
gi|306515646|gb|EFM84173.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4248]
gi|310626961|gb|EFQ10244.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 512]
gi|310629319|gb|EFQ12602.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0102]
gi|310632188|gb|EFQ15471.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0635]
gi|311288474|gb|EFQ67030.1| methionyl-tRNA synthetase [Enterococcus faecalis DAPTO 516]
gi|311291323|gb|EFQ69879.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0470]
gi|315029800|gb|EFT41732.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4000]
gi|315034325|gb|EFT46257.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0027]
gi|315145783|gb|EFT89799.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2141]
gi|315149690|gb|EFT93706.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0012]
gi|315153002|gb|EFT97018.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0031]
gi|315155233|gb|EFT99249.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0043]
gi|315157560|gb|EFU01577.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0312]
gi|315163011|gb|EFU07028.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0645]
gi|315167934|gb|EFU11951.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1341]
gi|315172032|gb|EFU16049.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1342]
gi|315173438|gb|EFU17455.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1346]
gi|315574157|gb|EFU86348.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309B]
gi|315577288|gb|EFU89479.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0630]
gi|315581700|gb|EFU93891.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0309A]
gi|327534510|gb|AEA93344.1| methionine--tRNA ligase [Enterococcus faecalis OG1RF]
gi|329574121|gb|EGG55698.1| methionine--tRNA ligase [Enterococcus faecalis TX1467]
Length = 677
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 29 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 77
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 78 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 137
Query: 156 TSSIPNYGS 164
S +
Sbjct: 138 VSDEEFFTE 146
>gi|323701662|ref|ZP_08113334.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
gi|323533435|gb|EGB23302.1| methionyl-tRNA synthetase [Desulfotomaculum nigrificans DSM 574]
Length = 514
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 50/321 (15%), Positives = 87/321 (27%), Gaps = 70/321 (21%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI A+ + N
Sbjct: 17 DKLHIGHAYTTVAADAMARFKRLTGYD--VWF---LTGSDEHGQKIERAAKAK------N 65
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
F K +RL H + + Q + G Y+
Sbjct: 66 QTPKEYVDHIVDGFKKLWSRLDVSYNDFIRTTDERHRKVVQQIFQQLYDQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP- 207
+ K + + + Y + W + P + P
Sbjct: 126 WYCTPCETFFTEYQLVEGKCPDCQREVEKVREESYFFRQSKYAERWLKFIEENPDFIQPV 185
Query: 208 -----------------------WGRGRP-----------------------GWHIECSA 221
+ G P G+ E +
Sbjct: 186 SRRNEMVSFVKQGLEDLCVSRTTFDWGIPVPFDPKHVVYVWVDALTNYISALGYGSEDDS 245
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + DIH G D++ H + I +G+L L+ KMSKS
Sbjct: 246 LYRKFW--PADIHLVGKDIVRFHTIIWPIMLMALN--LPLPKKVIGHGWLLLDSGKMSKS 301
Query: 282 NGNFITINELLETKKFGGRSW 302
GN + + L++ +
Sbjct: 302 KGNVVDPHTLVDKYGVDAVRY 322
>gi|282163406|ref|YP_003355791.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
gi|282155720|dbj|BAI60808.1| methionyl-tRNA synthetase [Methanocella paludicola SANAE]
Length = 669
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 47/169 (27%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AHIG+ R I D+ R LR + T+V D I+ A
Sbjct: 13 TCGL-PYANGAAHIGHLRTYIPADMFVRTLRMMG--QNTTFVCG----SDTHGTPIVVNA 65
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILH 142
++ + + K F + + + + +++++ +
Sbjct: 66 EEQGTT------PGELVKKYHLVFEQTFKNFEIDFNHYGSTDDLENHERTRSIVRDLEKN 119
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y ++ + ++
Sbjct: 120 GYVYPKEIKVAYCGHCQRGLPDRYVEGTCPYCGALARGDECDIGCQKHL 168
>gi|308062316|gb|ADO04204.1| methionyl-tRNA synthetase [Helicobacter pylori Cuz20]
Length = 653
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 63/449 (14%), Positives = 117/449 (26%), Gaps = 84/449 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFKIMFEKGDIYKGVYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLNAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMVHFACARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + ++ + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKI-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNAS 388
+ L + ++ +H++ + H L
Sbjct: 359 NLLNRLLGMAKKYFNHSLKSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNV 418
Query: 389 AHILGIEVCKEHL----NKNISIAIEKLV 413
L + KE N S +E L+
Sbjct: 419 YDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|315027115|gb|EFT39047.1| methionyl-tRNA synthetase [Enterococcus faecalis TX2137]
Length = 677
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 29 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 77
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 78 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 137
Query: 156 TSSIPNYGS 164
S +
Sbjct: 138 VSDEEFFTE 146
>gi|311743181|ref|ZP_07716989.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
gi|311313861|gb|EFQ83770.1| methionine--tRNA ligase [Aeromicrobium marinum DSM 15272]
Length = 529
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 43/158 (27%), Gaps = 13/158 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ + DVL R R + V Y +T +D+ K++ +A S
Sbjct: 15 VNDAPHIGHGYTTTIGDVLARWHRQRG--EQVHY---LTGVDEHGQKVLRKAAAAGVSPQ 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
D + + + + + H + + + G Y +
Sbjct: 70 --DWVDRLVETEWKPMLATIDASN--DDFIRTTEPRHARGVQAFWERLNEAGAVYRGEFS 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
S R + +
Sbjct: 126 GWYSVGSEEFVGDDDVRDGEGDDAGHRVSVLDGSRVEH 163
>gi|49474218|ref|YP_032260.1| methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
gi|49239722|emb|CAF26101.1| Methionyl-tRNA synthetase [Bartonella quintana str. Toulouse]
Length = 519
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 45/158 (28%), Gaps = 9/158 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A I D L R R K V ++ TD + + + +
Sbjct: 18 PHIGHAYSAIASDALARFQRLDG--KNVFFLSG-TD-----EHGLKMQQTATALGMTPKQ 69
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ F K L C H + + + G Y + +
Sbjct: 70 LADRNSAVFKKMLAALNCSNDDFIRTTEERHYQACQEIWKKMQADGDIYLGCYKGWYSVR 129
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y ++ + + N + ++
Sbjct: 130 QEAYYEEKETEVGEDNIRREKELGSPVEWNEEESYFFR 167
>gi|307286738|ref|ZP_07566824.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|306502216|gb|EFM71500.1| methionyl-tRNA synthetase [Enterococcus faecalis TX0109]
gi|315165210|gb|EFU09227.1| methionyl-tRNA synthetase [Enterococcus faecalis TX1302]
Length = 677
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 29 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 77
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 78 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVKQGDIYLGEYEGWYS 137
Query: 156 TSSIPNYGS 164
S +
Sbjct: 138 VSDEEFFTE 146
>gi|302388627|ref|YP_003824448.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
gi|302199255|gb|ADL06825.1| methionyl-tRNA synthetase [Thermosediminibacter oceani DSM 16646]
Length = 644
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 55/183 (30%), Gaps = 17/183 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A IV D L R R + +T D +KI + A++
Sbjct: 15 VNAQPHIGHAYTTIVADFLARWHRLAGYDTFF-----LTGTDEHGEKIAQAAQKNG---- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ + + +F + +L H + Y++Q + G Y
Sbjct: 66 --EEPQAFVDRVSARFREAWEKLCIEYDDFIRTTDERHKKVVQYVLQKVYDAGDIYYGEY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E ++ + + ++ F + K + ++
Sbjct: 124 EGLYCVGCERFLTEKELVD--GRCPDHGTVPERRREGNYFFRMEKYREWLRDYIQANPDF 181
Query: 211 GRP 213
RP
Sbjct: 182 IRP 184
>gi|154249481|ref|YP_001410306.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
gi|154153417|gb|ABS60649.1| methionyl-tRNA synthetase [Fervidobacterium nodosum Rt17-B1]
Length = 650
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 51/161 (31%), Gaps = 14/161 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG++ I+ D+L R R E V Y +T D+ KI + AR++
Sbjct: 13 VNAEPHIGSSYTTIIGDILARYKRLMGYE--VFY---LTGTDEHGQKIAQAAREKGLEPK 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE-ANN 150
+ + K ++ KD + NH + Y + ++ +G Y+
Sbjct: 68 --ELCDTLAEKF-KELWKDLGITN--DYFIRTTDENHEKTVQYFVSKMMENGDIYKGIYE 122
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + + ++
Sbjct: 123 GWYCVPCETYWNEEELEHDEHGHNICPSCKREVNLIREENY 163
>gi|24418702|sp|Q8PWA0|SYK1_METMA RecName: Full=Lysyl-tRNA synthetase 1; AltName: Full=Lysine--tRNA
ligase 1; Short=LysRS 1
Length = 537
Score = 45.8 bits (107), Expect = 0.014, Method: Composition-based stats.
Identities = 56/344 (16%), Positives = 103/344 (29%), Gaps = 42/344 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR-NITDIDDKI------IERAR 84
G T HIGN R ++ D YR L + Y+ N D + + +
Sbjct: 27 GITPSGHIHIGNMREVVTADAAYRALLDRGADARFIYIADNF----DPLRKVYPFLPESY 82
Query: 85 QEHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
EH PI++ + + + F++ RL ++ I+
Sbjct: 83 AEHVGKPISEVPCPCGECANYSEHFLKPFLEALRRLGINPEVYRADEMYRAGMYTEAIKT 142
Query: 139 IILHGH-AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ + + E+ T + R + T+V D++
Sbjct: 143 ALVKRNEIAKILEEVSGKTVAEEWSPFNPRCNECGKITTTKVTGFDPDAETVDYVCACGH 202
Query: 198 TPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
+ P G + W P LG + G ++
Sbjct: 203 SGTVPMAGGGKLTWRVDWPAR--------WAVLGVTVEPFGKDHASRGGSYDTGKRIVRE 254
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
E I + + MS S G ++I+++LE P V+R ++ T
Sbjct: 255 IYGHEPPFPIVYEW-IMLGKQGAMSSSTGVVVSISDMLEVV-------PPEVLRYLIIRT 306
Query: 315 HYREPIDFTVQRL-----TEAEILLSKWPQTSTSKGIIDPAVLS 353
+ I F + E E L K+ S G + +
Sbjct: 307 KPEKHIQFDPAQPLLTIVDEYERLREKFRDNDPSMGEFEKRIYE 350
>gi|295113880|emb|CBL32517.1| methionyl-tRNA synthetase [Enterococcus sp. 7L76]
Length = 669
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 21 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 70 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|315148087|gb|EFT92103.1| methionyl-tRNA synthetase [Enterococcus faecalis TX4244]
Length = 677
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 29 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 77
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 78 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 137
Query: 156 TSSIPNYGS 164
S +
Sbjct: 138 VSDEEFFTE 146
>gi|297820298|ref|XP_002878032.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
lyrata]
gi|297323870|gb|EFH54291.1| hypothetical protein ARALYDRAFT_906959 [Arabidopsis lyrata subsp.
lyrata]
Length = 615
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 32/188 (17%), Positives = 51/188 (27%), Gaps = 18/188 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + P
Sbjct: 79 VNAPPHMGSAYTTIAADSIARFQRLLG--KKVIF---ITGTDEHGEKIATSAAANGRNPP 133
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ II+ + KD + H + + +G Y
Sbjct: 134 --EHCDIISQSY-RTLWKDLDI--AYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYE 188
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + V K F L K P+E
Sbjct: 189 GLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYF---FALSKYQKPLEDILAQNPR 245
Query: 210 RGRPGWHI 217
+P + +
Sbjct: 246 FVQPSYRL 253
>gi|317011232|gb|ADU84979.1| methionyl-tRNA synthetase [Helicobacter pylori SouthAfrica7]
Length = 642
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 54/420 (12%), Positives = 111/420 (26%), Gaps = 74/420 (17%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAY 146
D+IS I F D + + ++++ + +
Sbjct: 68 AYADSISAIFKSQWDFFNLDYDGFIRTTDNEHQKCVQNAFEIMFEKGDIYKGTYSGYYCV 127
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP---- 202
+ + + E + + +L + E
Sbjct: 128 SCESYCAISKTDNTEGKILCPDCLRETTLLEEESYFFRLSAYEKPLLEFYAKNPEAILPI 187
Query: 203 --------------------GWESPWGRGRPGWHIE---------------------CSA 221
WG P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LENRMAHFECARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + +L + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALVERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ L + ++ ++++ + + + A + G+
Sbjct: 359 NLLNRLLGMAKKYFNHSLKSAKITAYYPKELEKVYQILDNANSFVPKMQLHKALEELFGV 418
>gi|21227798|ref|NP_633720.1| lysyl-tRNA synthetase [Methanosarcina mazei Go1]
gi|20906206|gb|AAM31392.1| Lysyl-tRNA synthetase [Methanosarcina mazei Go1]
Length = 540
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 56/344 (16%), Positives = 103/344 (29%), Gaps = 42/344 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR-NITDIDDKI------IERAR 84
G T HIGN R ++ D YR L + Y+ N D + + +
Sbjct: 30 GITPSGHIHIGNMREVVTADAAYRALLDRGADARFIYIADNF----DPLRKVYPFLPESY 85
Query: 85 QEHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
EH PI++ + + + F++ RL ++ I+
Sbjct: 86 AEHVGKPISEVPCPCGECANYSEHFLKPFLEALRRLGINPEVYRADEMYRAGMYTEAIKT 145
Query: 139 IILHGH-AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ + + E+ T + R + T+V D++
Sbjct: 146 ALVKRNEIAKILEEVSGKTVAEEWSPFNPRCNECGKITTTKVTGFDPDAETVDYVCACGH 205
Query: 198 TPMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
+ P G + W P LG + G ++
Sbjct: 206 SGTVPMAGGGKLTWRVDWPAR--------WAVLGVTVEPFGKDHASRGGSYDTGKRIVRE 257
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
E I + + MS S G ++I+++LE P V+R ++ T
Sbjct: 258 IYGHEPPFPIVYEW-IMLGKQGAMSSSTGVVVSISDMLEVV-------PPEVLRYLIIRT 309
Query: 315 HYREPIDFTVQRL-----TEAEILLSKWPQTSTSKGIIDPAVLS 353
+ I F + E E L K+ S G + +
Sbjct: 310 KPEKHIQFDPAQPLLTIVDEYERLREKFRDNDPSMGEFEKRIYE 353
>gi|21358483|ref|NP_650348.1| Methionyl-tRNA synthetase [Drosophila melanogaster]
gi|75026854|sp|Q9VFL5|SYMM_DROME RecName: Full=Methionyl-tRNA synthetase, mitochondrial; AltName:
Full=Mitochondrial methionine--tRNA ligase;
Short=MtMetRS; Flags: Precursor
gi|17861592|gb|AAL39273.1| GH13807p [Drosophila melanogaster]
gi|23171238|gb|AAF55037.2| Methionyl-tRNA synthetase [Drosophila melanogaster]
gi|220945160|gb|ACL85123.1| Aats-met-PA [synthetic construct]
gi|220954980|gb|ACL90033.1| Aats-met-PA [synthetic construct]
Length = 582
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 53/188 (28%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E+ V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPEQDVRLC---TGTDEHGTKIQQAASLHGV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+ + + F + + + H + + + GH Y A +
Sbjct: 84 VAKYCDDISQRYREVFRSASIQ---QDDFIRTTEDRHKRAVANFWRTLHTRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ + W
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARVRPAKF 208
>gi|29375514|ref|NP_814668.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
gi|255971380|ref|ZP_05421966.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
gi|255973998|ref|ZP_05424584.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256617799|ref|ZP_05474645.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256761684|ref|ZP_05502264.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256854227|ref|ZP_05559591.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
gi|256957214|ref|ZP_05561385.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256960056|ref|ZP_05564227.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256964250|ref|ZP_05568421.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|257077814|ref|ZP_05572175.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|257083841|ref|ZP_05578202.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|257089340|ref|ZP_05583701.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|257418524|ref|ZP_05595518.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
gi|257421174|ref|ZP_05598164.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
gi|294780517|ref|ZP_06745880.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|300859824|ref|ZP_07105912.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|38258306|sp|Q837B3|SYM_ENTFA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|29342974|gb|AAO80738.1| methionyl-tRNA synthetase [Enterococcus faecalis V583]
gi|255962398|gb|EET94874.1| methionyl-tRNA synthetase [Enterococcus faecalis T1]
gi|255966870|gb|EET97492.1| methionyl-tRNA synthetase [Enterococcus faecalis T2]
gi|256597326|gb|EEU16502.1| methionyl-tRNA synthetase [Enterococcus faecalis ATCC 4200]
gi|256682935|gb|EEU22630.1| methionyl-tRNA synthetase [Enterococcus faecalis T3]
gi|256709787|gb|EEU24831.1| methionyl-tRNA synthetase [Enterococcus faecalis T8]
gi|256947710|gb|EEU64342.1| methionyl-tRNA synthetase [Enterococcus faecalis DS5]
gi|256950552|gb|EEU67184.1| methionyl-tRNA synthetase [Enterococcus faecalis Merz96]
gi|256954746|gb|EEU71378.1| methionyl-tRNA synthetase [Enterococcus faecalis HIP11704]
gi|256985844|gb|EEU73146.1| methionyl-tRNA synthetase [Enterococcus faecalis JH1]
gi|256991871|gb|EEU79173.1| methionyl-tRNA synthetase [Enterococcus faecalis Fly1]
gi|256998152|gb|EEU84672.1| methionyl-tRNA synthetase [Enterococcus faecalis CH188]
gi|257160352|gb|EEU90312.1| methionyl-tRNA synthetase [Enterococcus faecalis T11]
gi|257162998|gb|EEU92958.1| methionyl-tRNA synthetase [Enterococcus faecalis X98]
gi|294452344|gb|EFG20783.1| methionine--tRNA ligase [Enterococcus faecalis PC1.1]
gi|300850642|gb|EFK78391.1| methionine--tRNA ligase [Enterococcus faecalis TUSoD Ef11]
gi|323480110|gb|ADX79549.1| methionyl-tRNA synthetase/Methionine--tRNA ligase, MetRS
[Enterococcus faecalis 62]
Length = 669
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 21 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 70 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|257081173|ref|ZP_05575534.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|257086267|ref|ZP_05580628.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
gi|256989203|gb|EEU76505.1| methionyl-tRNA synthetase [Enterococcus faecalis E1Sol]
gi|256994297|gb|EEU81599.1| methionyl-tRNA synthetase [Enterococcus faecalis D6]
Length = 669
Score = 45.8 bits (107), Expect = 0.015, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 21 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 70 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQQIFDRLVEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|161511098|ref|NP_771156.2| methionyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
Length = 543
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D L R R K V + +T D+ K+I+ A+ E +
Sbjct: 48 PHIGHAYEAIATDTLARFARLDG--KDVFF---LTGTDEHGLKMIQTAQNEGLT------ 96
Query: 96 ISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
S + ++N +F RL + H + + + +G Y +
Sbjct: 97 PSALAARNAARFKAMDERLNVSFDRFIRTTEEQHHRSTQEIWRRMEANGDIYADTYAGWY 156
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 157 SVRDEAYYAEDE 168
>gi|110667531|ref|YP_657342.1| methionyl-tRNA synthetase [Haloquadratum walsbyi DSM 16790]
gi|121689847|sp|Q18JV4|SYM_HALWD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|109625278|emb|CAJ51700.1| methionine--tRNA ligase [Haloquadratum walsbyi DSM 16790]
Length = 741
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 14/54 (25%), Positives = 21/54 (38%), Gaps = 6/54 (11%)
Query: 10 TLERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
T + F DP+ + CG Y HIG+ R + D+ R L+
Sbjct: 15 TQTQTRESFPTDDPAVV---TCGL-PYANGDLHIGHLRTYVGGDIFSRALKRLG 64
>gi|297582380|ref|YP_003698160.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
gi|297140837|gb|ADH97594.1| methionyl-tRNA synthetase [Bacillus selenitireducens MLS10]
Length = 662
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 22/131 (16%), Positives = 40/131 (30%), Gaps = 15/131 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A + S
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD--VRY---LTGTDEHGQKIEQKAEENGKS------P 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + ++ + + G Y E +
Sbjct: 71 QQFVDDISSDIQELWKKLDISYDDFIRTTEDRHKQVVQHIFERFLEQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFS 166
S Y
Sbjct: 131 VSDETFYTELQ 141
>gi|315926518|gb|EFV05900.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
DFVF1099]
Length = 196
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 30/185 (16%), Positives = 44/185 (23%), Gaps = 21/185 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
N K + +F K + T HI + + + G Y+
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEFEITYDIYARTTDTRHIEFIKAMFLKMWQKGDIYKDEY 119
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
S K + W
Sbjct: 120 EGHYCISCESFFTQSQLINDCSCPDCGKQTRILKEESYFFKLS----KYQDKILQWYEEK 175
Query: 209 GRGRP 213
P
Sbjct: 176 DPILP 180
>gi|310825918|ref|YP_003958275.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
gi|308737652|gb|ADO35312.1| methionyl-tRNA synthetase [Eubacterium limosum KIST612]
Length = 641
Score = 45.8 bits (107), Expect = 0.016, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 36/150 (24%), Gaps = 10/150 (6%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+ + D L R + + IT ID+ KI + A ++ S
Sbjct: 16 SDLHIGHTYTTVAADTLKRFKALQGYDAYM-----ITGIDEHGQKIEKVAEEKGMSAQAF 70
Query: 94 DAISI--ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I + + P H ++ +
Sbjct: 71 VDEEAARIAELWKLMRIDHDQLIRTTDPEHMKTIQRIFKKLYDQGDIYKGKYEGWYCTPC 130
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
F T S G + +
Sbjct: 131 ESFWTESQIVDGKCPDCGLPVEMASEEAYF 160
>gi|116671079|ref|YP_832012.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
gi|116611188|gb|ABK03912.1| methionyl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 519
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 23/161 (14%), Positives = 50/161 (31%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + +T D+ KI + A +E +
Sbjct: 22 PHIGHAYEYIATDAMARFKRLDGYD--VFF---LTGTDEHGMKIAQTADKEGIT------ 70
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N + + L +H + + + +G Y + E +
Sbjct: 71 PKELVDRNAEIYKAAHAALGISYDRFIRTTDEDHYAASQAIWKKMEANGDIYLSKYEGWY 130
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y ++ +R + + ++
Sbjct: 131 SVRDEAYYVEDETVVKEDGLRYSRETDTELTWTAEESYFFR 171
>gi|257415492|ref|ZP_05592486.1| methionyl-tRNA synthetase [Enterococcus faecalis AR01/DG]
gi|257157320|gb|EEU87280.1| methionyl-tRNA synthetase [Enterococcus faecalis ARO1/DG]
Length = 669
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +N
Sbjct: 21 HIGNSYTTIACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAAE------LNVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H+ + + ++ G Y E +
Sbjct: 70 KEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHMAAVQRIFDRLVEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|295106117|emb|CBL03660.1| methionyl-tRNA synthetase [Gordonibacter pamelaeae 7-10-1-b]
Length = 531
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 41/144 (28%), Gaps = 15/144 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A I D + R R + V +V T +D+ K+ + A + +
Sbjct: 15 VNAAPHLGTAYTTIAADTVARYQRMNGYD--VAFV---TGMDEHGQKVADTAAAKGMTPQ 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
F L H + Q + G Y+ +
Sbjct: 70 DWCDSMEPA------FRDAWDMLGITYTDFVRTTEPRHAKSVQKFWQELYDKGWCYKGSY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
E + Y K DE +
Sbjct: 124 EGWYCVHEETYYAESDLEKNDEGQ 147
>gi|256822588|ref|YP_003146551.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
gi|256796127|gb|ACV26783.1| arginyl-tRNA synthetase [Kangiella koreensis DSM 16069]
Length = 588
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 43/173 (24%), Gaps = 17/173 (9%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
GP V H+G+ R I+ D L R+ R+ + + D A
Sbjct: 123 GPNVAKSMHVGHLRTAIIGDSLQRIFRFKGYQV----------VSD-----AHLGDWGTQ 167
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + T D + E +
Sbjct: 168 MGMLIEGLKKRQTDLVYFDADFSGPYPEESPVTIQDLEEIYPQESGLCKSDEAVAEKARQ 227
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+ + K + Y + + F LWK + +P
Sbjct: 228 ATLELQNGRAGYRAL-WKHFVDVSVATLKRDYGELGVS-FDLWKGESDADPFI 278
>gi|28572916|ref|NP_789696.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
gi|28411049|emb|CAD67434.1| methionyl-tRNA synthetase [Tropheryma whipplei TW08/27]
Length = 583
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPI 92
V D HIG+A ++V DV R R + ++ TD + K++ RA +E P
Sbjct: 12 VNDIPHIGHAYTLVVSDVFARWQRQSGKDT--FFLSG-TD-EHGLKVL-RAAEEKNMTPQ 66
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + K + + D ++ + + H ++ + I + + + Y
Sbjct: 67 G--WADLMVKTAWKPLLDLMHISNDDF-VRTTESRHRERVKWFINRLRENQYIYSGQYSG 123
Query: 153 IFDTSSIPN 161
+ S
Sbjct: 124 YYCVSCEEF 132
>gi|76801248|ref|YP_326256.1| methionyl-tRNA synthetase [Natronomonas pharaonis DSM 2160]
gi|121724492|sp|Q3IT47|SYM_NATPD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|76557113|emb|CAI48687.1| methionine--tRNA ligase [Natronomonas pharaonis DSM 2160]
Length = 698
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 20/134 (14%), Positives = 36/134 (26%), Gaps = 22/134 (16%)
Query: 16 TEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
EF P+ + CG Y H+G+ R + D R L + V +V
Sbjct: 3 EEFPTETPAVV---TCGL-PYANGDLHVGHLRTYVSGDAYARALESLG--QSVAFVSG-- 54
Query: 74 DIDD----KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
D I A +E + +Q+ + + +
Sbjct: 55 --SDMHGTPIAVNAAEEGVD------PESFAVEYHEQYEETFPQFNIEFDNYGHTHDETN 106
Query: 130 PQMIYLIQNIILHG 143
+M +
Sbjct: 107 TEMTRSFVRSWIDD 120
>gi|90424203|ref|YP_532573.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
gi|90106217|gb|ABD88254.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB18]
Length = 522
Score = 45.5 bits (106), Expect = 0.017, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 40/130 (30%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +V D + R R + V + +T D+ K+ + A E +
Sbjct: 25 PHIGHAYTAMVSDAIARFQRLDGYD--VRF---LTGTDEHGLKMQQTAIAEGLT------ 73
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L + H L I +G Y +
Sbjct: 74 PLQLADRNSARFRDMMAALNISYDDYIRTTEPRHERSCQALWTAIENNGDIYLDKYAGWY 133
Query: 155 DTSSIPNYGS 164
+
Sbjct: 134 SVRQEAYFDE 143
>gi|289704778|ref|ZP_06501199.1| methionine--tRNA ligase [Micrococcus luteus SK58]
gi|289558494|gb|EFD51764.1| methionine--tRNA ligase [Micrococcus luteus SK58]
Length = 541
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 25/169 (14%), Positives = 56/169 (33%), Gaps = 16/169 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + +T D+ K+ + A+Q+ S
Sbjct: 21 PHIGHAYEYIASDAMARFQRLDG--RDVRF---LTGTDEHGQKMEQTAQQQGVSAL---- 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ ++N F + + ++ R T+H + + + + +G Y +
Sbjct: 72 --ELATRNAAVFREMDDDVLDISYDRFIRTTDTDHAEAVREIWRRMEANGDIYLGSYAGW 129
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ +G + + ++ S +P
Sbjct: 130 YSVRDERYFGEDETEVGQDGVRRAVETGTEVTWTEEESYFFRLSKYQQP 178
>gi|256830947|ref|YP_003159675.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
gi|256580123|gb|ACU91259.1| methionyl-tRNA synthetase [Desulfomicrobium baculatum DSM 4028]
Length = 648
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 58/424 (13%), Positives = 102/424 (24%), Gaps = 92/424 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI- 90
V H+G+ IV D + R + + +T D DKI++ A
Sbjct: 13 VNARPHLGHGYTTIVADSVSRF--HRLKGDATFF---LTGTDEHGDKIVQAAEAAGQDPK 67
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+D IS + + H+ Q ++ +I +
Sbjct: 68 TYSDTISQLFKDLWPVLEVSNDQFIRTTDLRHKACVRHVLQTVFDKGDIYFDEYG----G 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME--PGWESP- 207
F K + + ++ + L +E P + P
Sbjct: 124 HYCFGCERFYTDKELVDGKCPDHQTVPTFIKEKNYFFRMSKYLEPLREYIEANPDFIQPE 183
Query: 208 ----------------WGRGRP----GWHIECSAMS------------------------ 223
RP W IE S
Sbjct: 184 RYRNEVLSMLKEDLGDLCISRPKTRLTWGIELPFDSDFVTYVWFDALINYISALGYPDGE 243
Query: 224 --SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
Y H D++ PH A +G+ + KMSKS
Sbjct: 244 DFRKYWSGAH--HLVAKDILKPHAIFWPTMLMSA--EIPLYKGLRVHGYWTVNETKMSKS 299
Query: 282 NGNFITINELLETKKFGGRSW----------------PAPVIRL---------AMLMTHY 316
GN + ++ + + A V R +
Sbjct: 300 IGNVVAPLDMAQKYGLSAFRYFLLSEMSFGQDSSFSEDALVGRFNADLANDLGNLFSRSL 359
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
+ + E LL + G + + + A+++L +L R
Sbjct: 360 SMTHKYFGGVVPECGELLD-LDREVLELGHNAMSNYQSQFEHFQFSRALKSLWELVRHLN 418
Query: 377 KNHD 380
K D
Sbjct: 419 KYID 422
>gi|332795876|ref|YP_004457376.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
gi|332693611|gb|AEE93078.1| leucyl tRNA synthetase, catalytic core [Acidianus hospitalis W1]
Length = 920
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 12/53 (22%), Positives = 17/53 (32%), Gaps = 13/53 (24%)
Query: 13 RKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
RK F + P Y HIG+ R + D+ R +R
Sbjct: 27 RKKKYFITV-----------PFPYTNSPMHIGHGRTYVTADIYARYMRMKGYN 68
>gi|321313708|ref|YP_004205995.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
gi|320019982|gb|ADV94968.1| methionyl-tRNA synthetase [Bacillus subtilis BSn5]
Length = 664
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A QE N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEQE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L H + + Q ++ +G Y E +
Sbjct: 71 QEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ + G +
Sbjct: 131 IPDETFYTETQLVDIERNEKGEVI 154
>gi|239930094|ref|ZP_04687047.1| methionyl-tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291438432|ref|ZP_06577822.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
gi|291341327|gb|EFE68283.1| methionyl tRNA synthetase [Streptomyces ghanaensis ATCC 14672]
Length = 538
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 21/115 (18%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V + +T D+ KI+ A S
Sbjct: 23 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWF---LTGTDEHGQKIMRTAEANGVSPQ 77
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + +++ + + H ++ +Q++ G Y
Sbjct: 78 --EWADKLVTESWEPLWAHLEIAN--DDFIRTTQKRHTDRVQEFVQDLYDKGEIY 128
>gi|322386045|ref|ZP_08059684.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
gi|321269889|gb|EFX52810.1| methionine--tRNA ligase [Streptococcus cristatus ATCC 51100]
Length = 665
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L +A Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIYLGEYAGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|239825617|ref|YP_002948241.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
gi|239805910|gb|ACS22975.1| methionyl-tRNA synthetase [Geobacillus sp. WCH70]
Length = 648
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 41/148 (27%), Gaps = 11/148 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI +A ++ + +
Sbjct: 20 HIGHAYTTVAGDAMARYKRLRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ--QYV 72
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I + + K T Q R + ++ + + E
Sbjct: 73 DEIVEGIQELWKKLDISYDDFIRTTQERHKKVVEKIFARLVEQGDI-YLGEYEGWYCTPC 131
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 132 ESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|58584456|ref|YP_198029.1| methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|58418772|gb|AAW70787.1| Methionyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 540
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 43/134 (32%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLICDVTARFMKLAG--KNVKFT---TGTDEHGQKIEKAAKTKGM--- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T K + F K + H ++ L + G Y +
Sbjct: 68 ---HPKEFTDKVSVSFRKLAEFIDFQYDDFIRTTEERHEKAVVALWDRLEERGQIYLDSY 124
Query: 151 EIIFDTSSIPNYGS 164
+ S Y
Sbjct: 125 SGWYSVSDEAFYQE 138
>gi|238583385|ref|XP_002390224.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
gi|215453394|gb|EEB91154.1| hypothetical protein MPER_10534 [Moniliophthora perniciosa FA553]
Length = 282
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 43/129 (33%), Gaps = 13/129 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ ++ DV R R V +V T D+ KI + A +
Sbjct: 39 PHIGHLYSLVTADVFARYQRLKNPGIPVRFV---TGTDEHGLKIQKAATAKGM------Q 89
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +++F + ++ T + H + + + + G Y+ + +
Sbjct: 90 PKEFCDQTSEKFRRLSSVADVTYTTFVRTSDEVHYKSVQQIWRELDAQGLIYKGSYSGWY 149
Query: 155 DTSSIPNYG 163
+ Y
Sbjct: 150 SVTDECFYT 158
>gi|170782642|ref|YP_001710976.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
sepedonicus]
gi|169157212|emb|CAQ02395.1| putative methionyl tRNA synthetase [Clavibacter michiganensis
subsp. sepedonicus]
Length = 528
Score = 45.5 bits (106), Expect = 0.018, Method: Composition-based stats.
Identities = 22/130 (16%), Positives = 39/130 (30%), Gaps = 12/130 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + +T D+ KI+ A +
Sbjct: 19 VNDVPHIGHAYTEVAADVLARWHRQRGDDTWF-----LTGTDEHGQKILRTATANDTTPK 73
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
++T Q ++ + H + +Q + G Y +
Sbjct: 74 AWAD-RLVTESW-QPLLEAVDISN--DDFIRTTDARHEESVKVFLQRLHDAGFIYTGEYK 129
Query: 152 IIFDTSSIPN 161
+
Sbjct: 130 GYYCVGCEEY 139
>gi|291482409|dbj|BAI83484.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. natto BEST195]
Length = 664
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A QE N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEQE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L H + + Q ++ +G Y E +
Sbjct: 71 QEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ + G +
Sbjct: 131 IPDETFYTETQLVDIERNEKGEVI 154
>gi|42528053|ref|NP_973151.1| lysyl-tRNA synthetase [Treponema denticola ATCC 35405]
gi|41819098|gb|AAS13070.1| lysyl-tRNA synthetase [Treponema denticola ATCC 35405]
Length = 528
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 28 MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
+Y C G T H+GN R +I D++ R LR K V ++
Sbjct: 27 VYTCASGITPSGTVHVGNFREIISVDLVVRALRSRG--KNVRFI 68
>gi|296329539|ref|ZP_06872025.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305672736|ref|YP_003864407.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
gi|296153282|gb|EFG94145.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii ATCC
6633]
gi|305410979|gb|ADM36097.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. spizizenii str.
W23]
Length = 664
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A QE N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEQE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L H + + Q ++ +G Y E +
Sbjct: 71 QEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ + G +
Sbjct: 131 IPDETFYTETQLVDIERNEKGEVI 154
>gi|254774038|ref|ZP_05215554.1| methionyl-tRNA synthetase [Mycobacterium avium subsp. avium ATCC
25291]
Length = 519
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 15/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
H+G+A I D + R R + V + +T D+ K++E A E
Sbjct: 15 GDPHVGHAYEYIATDAIARFKRLDGFD--VRF---LTGTDEHGLKMVETAAAEGIDT--- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +N+ F + RL +H + + + G Y +
Sbjct: 67 ---AELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + + +D+ ++
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFR 166
>gi|28493730|ref|NP_787891.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
gi|28476772|gb|AAO44860.1| methionyl-tRNA synthetase [Tropheryma whipplei str. Twist]
Length = 583
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 49/129 (37%), Gaps = 10/129 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPI 92
V D HIG+A ++V DV R R + ++ TD + K++ RA +E P
Sbjct: 12 VNDIPHIGHAYTLVVSDVFARWQRQSGKDT--FFLSG-TD-EHGLKVL-RAAEEKNMTPQ 66
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + K + + D ++ + + H ++ + I + + + Y
Sbjct: 67 G--WADLMLKTAWKPLLDLMHISNDDF-VRTTESRHRERVKWFINRLRENQYIYSGQYSG 123
Query: 153 IFDTSSIPN 161
+ S
Sbjct: 124 YYCVSCEEF 132
>gi|253575851|ref|ZP_04853186.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
gi|251844894|gb|EES72907.1| methionyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str.
D14]
Length = 673
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 8/56 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
D HIG+A + D + R R + V Y +T D+ KI ++A+++ +
Sbjct: 18 DKLHIGHAYTTVAGDAMARYKRLRGFD--VRY---LTGTDEHGQKIEQKAKEKGQT 68
>gi|188527820|ref|YP_001910507.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
gi|188144060|gb|ACD48477.1| methionyl-tRNA synthetase [Helicobacter pylori Shi470]
Length = 662
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 63/449 (14%), Positives = 116/449 (25%), Gaps = 84/449 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + ++ + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKI-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNAS 388
+ L + ++ +H++ + H L
Sbjct: 359 NLLNRLLGMAKKYFNHSLKSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNV 418
Query: 389 AHILGIEVCKEHL----NKNISIAIEKLV 413
L + KE N S +E L+
Sbjct: 419 YDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|319943191|ref|ZP_08017474.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
gi|319743733|gb|EFV96137.1| leucine--tRNA ligase [Lautropia mirabilis ATCC 51599]
Length = 887
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 35/202 (17%), Positives = 57/202 (28%), Gaps = 24/202 (11%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+YR LR V D A
Sbjct: 37 KFYACSMLPYPSGILHMGHVRNYTINDVMYRHLRMSGY--NVLMPMG---WD------AF 85
Query: 85 ---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
E+ ++ A + T N + L + AT + +L
Sbjct: 86 GLPAENAALKNGVAPAKWTWDNIAYMKQQMQPLGLSIDWSREVATCSPDYYKWNQWLFLR 145
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----L 193
+ G AY + + +D + + G V ++ L
Sbjct: 146 MREKGIAYRKHGTVNWDPVDQTVLANEQVVDGKGWRSGAPVEKRDIPMYYLRITDYAGEL 205
Query: 194 WKRSTPMEPGWESPWGRGRPGW 215
K T GW + W
Sbjct: 206 LKEVTEHLEGWPERVRMMQANW 227
>gi|254390367|ref|ZP_05005584.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294813846|ref|ZP_06772489.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
27064]
gi|326442264|ref|ZP_08216998.1| methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|197704071|gb|EDY49883.1| methionyl tRNA synthetase [Streptomyces clavuligerus ATCC 27064]
gi|294326445|gb|EFG08088.1| Putative methionyl-tRNA synthetase [Streptomyces clavuligerus ATCC
27064]
Length = 537
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 22/115 (19%), Positives = 41/115 (35%), Gaps = 12/115 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + DVL R R + V Y +T D+ KI+ A +
Sbjct: 22 VNDAPHLGHAYTTVAGDVLTRWHRQRG--EKVWY---LTGTDEHGQKIMRTAETHGVTPQ 76
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + S+ + + + H ++ +Q++ G Y
Sbjct: 77 --EWCDKLVSEAWKPLWEHLDIAN--DDFIRTTEKRHTDRVKEFVQDLYDKGEIY 127
>gi|126466399|ref|YP_001041508.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
gi|126015222|gb|ABN70600.1| methionyl-tRNA synthetase [Staphylothermus marinus F1]
Length = 500
Score = 45.5 bits (106), Expect = 0.019, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 15/161 (9%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN- 93
HIG+A + DVL R + V + +T D+ K ++RA ++ P
Sbjct: 17 PPHIGHAYTTVFADVLARY--HRLIGDEVFF---MTGNDEHGLK-LQRAAEKKGVHPKQF 70
Query: 94 -DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
D ++ + K + + + Q +Y + +A
Sbjct: 71 VDEMADVYKKYWELLDISYDYFIRTTDDYHEKVVKTAIQKLYDKGLVYKASYA----GWY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
D + G + + P ++ ++ F L
Sbjct: 127 CVDCEKFYSPGEYIEINGKPHCPIHKKPLEWLEEETYYFKL 167
>gi|325474735|gb|EGC77921.1| lysyl-tRNA synthetase [Treponema denticola F0402]
Length = 528
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 28 MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
+Y C G T H+GN R +I D++ R LR K V ++
Sbjct: 27 VYTCASGITPSGTVHVGNFREIISVDLVVRALRSRG--KNVRFI 68
>gi|323706295|ref|ZP_08117861.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
gi|323534347|gb|EGB24132.1| methionyl-tRNA synthetase [Thermoanaerobacterium xylanolyticum
LX-11]
Length = 635
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 46/176 (26%), Gaps = 13/176 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI +A+++ +
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD-----VMFLTGTDEHGQKIQRKAKEKGVTPK-- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + I Q I+ + E
Sbjct: 69 QYVDEIVA-WIKDLWNTMDISNDKFIRTTDKQHEEIVQKIFTKLYEKGDIYKSEYEGWYC 127
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESP 207
+ + + ++ K + P + P
Sbjct: 128 TPCETFWTEKQLVDGNCPDCGRPVELVKEESYFFKLSNYADKLLKYYEEHPDFIQP 183
>gi|135148|sp|P23920|SYM_BACST RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|39989|emb|CAA40999.1| methionine--tRNA ligase [Geobacillus stearothermophilus]
Length = 649
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 44/151 (29%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V +T D+ KI +A+++ +
Sbjct: 17 DKLHIGHAYTTVAGDAMARYKRLRGYD-----VMYLTGTDEHGQKIQRKAQEKGVTPQ-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T Q R + ++ + + E
Sbjct: 70 QYVDDIVAGIQELWRKLDISYDDFIRTTQERHKKIVEKIFARLVEQGDI-YLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|16077106|ref|NP_387919.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221307847|ref|ZP_03589694.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
gi|221312169|ref|ZP_03593974.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221317102|ref|ZP_03598396.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221321365|ref|ZP_03602659.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
SMY]
gi|586060|sp|P37465|SYM_BACSU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|467427|dbj|BAA05273.1| methionyl-tRNA synthetase [Bacillus subtilis]
gi|2632305|emb|CAB11814.1| methionyl-tRNA synthetase [Bacillus subtilis subsp. subtilis str.
168]
Length = 664
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 27/144 (18%), Positives = 46/144 (31%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A QE N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD--VRY---LTGTDEHGQKIQQKAEQE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L H + + Q ++ +G Y E +
Sbjct: 71 QEYVDRAAADIQKLWKQLEISNDDFIRTTEKRHKVVIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ + G +
Sbjct: 131 IPDETFYTETQLVDIERNEKGEVI 154
>gi|307718042|ref|YP_003873574.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
gi|306531767|gb|ADN01301.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6192]
Length = 719
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 41/165 (24%), Gaps = 19/165 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEH 87
P V + H+GN ++ DV R R E YV TD RA +E
Sbjct: 12 PYVNNVPHLGNLIQVLSADVFARYCRSAGYETL--YVCG-TDEYGTA----TETRALEEG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
S + + + +T H + + +G+
Sbjct: 65 IS------PKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIK 118
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
E + ++ S R +
Sbjct: 119 ERTIQQLYSEKSGMFLADRYVRGTCPHCGYEDARGDQCEHCGKLL 163
>gi|238028342|ref|YP_002912573.1| methionyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237877536|gb|ACR29869.1| Methionyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 718
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA QE +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEQEGIT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D A ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSYAISFDNFYTTDSDENRVLSETIYLALKDAGLIAERDIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYQPTELLNPY 187
>gi|119512537|ref|ZP_01631615.1| hypothetical protein N9414_10842 [Nodularia spumigena CCY9414]
gi|119462798|gb|EAW43757.1| hypothetical protein N9414_10842 [Nodularia spumigena CCY9414]
Length = 60
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 5/37 (13%)
Query: 421 KMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRW 457
K + F+++D IR QL+ G L D + TRW
Sbjct: 27 KAENFAASDRIRDQLQELGTTLIDQSDGT-----TRW 58
>gi|323451856|gb|EGB07732.1| hypothetical protein AURANDRAFT_64726 [Aureococcus anophagefferens]
Length = 630
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 14/55 (25%), Positives = 27/55 (49%)
Query: 399 EHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQR 453
+ A+++L+ ER +L + + F +AD I QL G ++D + +R
Sbjct: 492 DRDASVDVDAVDELLVERALLRQCRDFEAADGIHAQLRRLGVEVDDRRKTWASRR 546
>gi|212637881|ref|YP_002314401.1| methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
gi|212559361|gb|ACJ32416.1| Methionyl-tRNA synthetase [Anoxybacillus flavithermus WK1]
Length = 656
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 20/140 (14%), Positives = 41/140 (29%), Gaps = 11/140 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 24 DKLHIGHAYTTVAGDAMARYKRMRGYD-----VMYLTGTDEHGQKIQRKAEEKGVTPQ-- 76
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + K T + R + ++ + + E
Sbjct: 77 QYVDEIVAGIKELWKKLDISYDDFIRTTEQRHKQVVEKIFARLLEQGDI-YLDEYEGWYC 135
Query: 154 FDTSSIPNYGSFSRRKIDEQ 173
S +
Sbjct: 136 TPCESFYTERQLVEGNCPDC 155
>gi|2415551|emb|CAA04301.1| arginyl-tRNA synthetase [Campylobacter jejuni]
Length = 97
Score = 45.5 bits (106), Expect = 0.020, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 60 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 96
>gi|212702582|ref|ZP_03310710.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
gi|212674023|gb|EEB34506.1| hypothetical protein DESPIG_00606 [Desulfovibrio piger ATCC 29098]
Length = 654
Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 47/341 (13%), Positives = 85/341 (24%), Gaps = 62/341 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS-- 89
V H+G+A IV D L R + +T D DKI++ A ++ S
Sbjct: 13 VNAKPHLGHAYTTIVADSLSRFHKTLGDNT-----MFLTGTDEHGDKIVKAAEKQGVSPK 67
Query: 90 -------------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
++ + QQ H
Sbjct: 68 EFVDGISGLFQQLWPHLGIENDAFVRTTDEDHKARVQRFLQQVYDAGDIYFGEFGGHYCY 127
Query: 125 ATNHIPQMIYLIQNIILHGHAYEA---NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
L + F S + + R
Sbjct: 128 GCERFYTEKELENGLCPQHLTKPEFISEKNYFFRMSKYLPWLREYIESHPDFIRPERYRN 187
Query: 182 KY----HKKNPADFILWKRSTPMEPGWESPWGR---GRPGWHIECSAMS-------SHYL 227
+ D + + + + G E P+ + + + +S Y
Sbjct: 188 EVLSMLESGALEDLCISRPKSRLTWGIELPFDKDYVCYVWFDALLNYISALGWPDGEKYK 247
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
H D++ PH A +G+ + KMSKS GN +
Sbjct: 248 TFWPGEHLVAKDILKPHAVFWPTMLKAAG--LPMYQHLNVHGYWLVRDTKMSKSLGNVVE 305
Query: 288 INELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRL 327
E+ + + R +L H+ F+ + +
Sbjct: 306 PLEM-------RQKYGLDAFRYFLLREMHFGSDASFSEEGM 339
>gi|319783483|ref|YP_004142959.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169371|gb|ADV12909.1| methionyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 516
Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 41/401 (10%), Positives = 97/401 (24%), Gaps = 35/401 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D L R R K V + +T D+ K+ + A +E +
Sbjct: 19 PHIGHAYTVIATDALARFQRLDG--KDVFF---LTGTDEHGLKMQQTAEKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ F T + + H + + + +G Y +
Sbjct: 68 PLALADRNSAIFRAMTEAMGGSNDQYIRTTEPRHYESCQAIWKAMAANGDIYLDRYSGWY 127
Query: 155 DTSSIPNYGS------------FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-E 201
+ E + L++
Sbjct: 128 SVRQEAYFDESETTLGDDGVRREPLGSPVEWNEEESYFFRLSAYQDKLLALYESQPDFVG 187
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKT 261
P ++ ++S + G +++ + A +
Sbjct: 188 PTERRNEVLSFVKSGLKDLSISRTTFKWGVPVPGDDKHVMYVWVDALTNYITAAGYPDTK 247
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPID 321
A W + ++ G+ + + + + + + R + +
Sbjct: 248 AEQWHYWPATHIIGKDIVRFHAVYWPAFLMSAGIELPKRVFAHGFLFNRGEKMSKSVGNV 307
Query: 322 FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
+ E L + S T + +
Sbjct: 308 VDPFAMVEHYGLDQVRYFFLREVPFGNDGSYSHDAIVNRTNADLAN-----GLGNLAQRS 362
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKM 422
L + + G+ + L +++ I K
Sbjct: 363 LSMIAKNCG--GVVPQRGELTDADRAILDQAAAALDIARKA 401
>gi|195570957|ref|XP_002103470.1| GD20436 [Drosophila simulans]
gi|194199397|gb|EDX12973.1| GD20436 [Drosophila simulans]
Length = 582
Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLC---TGTDEHGTKIQQAASLHGV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+ + + F + + + H + + + GH Y A +
Sbjct: 84 VAKYCDDISQRYREVFRSASIQ---QDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ + W
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARIRPAKF 208
>gi|227830592|ref|YP_002832372.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|227457040|gb|ACP35727.1| tRNA synthetase valyl/leucyl anticodon-binding [Sulfolobus
islandicus L.S.2.15]
Length = 934
Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV R LR
Sbjct: 45 SPMHVGHGRTYVTADVYARYLRMRGYN 71
>gi|15920845|ref|NP_376514.1| leucyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|48428671|sp|Q974N4|SYL1_SULTO RecName: Full=Leucyl-tRNA synthetase 1; AltName:
Full=Leucine--tRNA ligase 1; Short=LeuRS 1
gi|15621629|dbj|BAB65623.1| 945aa long hypothetical leucyl-tRNA synthetase [Sulfolobus
tokodaii str. 7]
Length = 945
Score = 45.5 bits (106), Expect = 0.021, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R I D+ R LR
Sbjct: 49 HIGHGRTYITADIYARYLRMKGYN 72
>gi|148242287|ref|YP_001227444.1| leucyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|189083177|sp|A5GT82|SYL_SYNR3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|147850597|emb|CAK28091.1| Leucyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 864
Score = 45.1 bits (105), Expect = 0.021, Method: Composition-based stats.
Identities = 22/97 (22%), Positives = 35/97 (36%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ RL+R K V + D A E+ +I
Sbjct: 54 HMGHVRNYVITDVIARLMRLKG--KRVLHPMG---WD------AFGLPAENAAIERGVDP 102
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
+ T +N Q + RL + AT H
Sbjct: 103 ADWTDRNIAQMREQLQRLGLSIDWSREVATCHSDYYR 139
>gi|331092546|ref|ZP_08341367.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
2_1_46FAA]
gi|330400658|gb|EGG80264.1| hypothetical protein HMPREF9477_02010 [Lachnospiraceae bacterium
2_1_46FAA]
Length = 631
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 54/416 (12%), Positives = 99/416 (23%), Gaps = 81/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN ++ D + R R + V + T D+ KI +A + S
Sbjct: 19 PHIGNTYEFVLADAIARYKRSQGYD--VFFQ---TGTDEHGQKIELKAEEAGVSPKEFVD 73
Query: 96 -----ISII--------------TSKNTQQFVKDTTRLACLAPTHQPR------------ 124
+ I T + ++ V+ +
Sbjct: 74 GVAAQVKEIADMMNTSYDKFIRTTDEYHEKQVQKIFKKLYDQGDIYKGHYEGMYCTPCES 133
Query: 125 --------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ + +A I I +
Sbjct: 134 FFTESQLVDGKCPDCGRKVQPAQEEAYFFKMSKYADRLIEHINTHPEFIQPVSRKNEMMN 193
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G + + + W G +C ++ + K
Sbjct: 194 NFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITGIGYDCDGENNEFFNKN 253
Query: 231 FD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ +H G D+I H D + +L KMSKS GN I
Sbjct: 254 WPADLHLIGKDIIRFHTIYWPIFLMALD--LPLPKQIFGHPWLLQGDGKMSKSKGNVIYA 311
Query: 289 NELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
+EL+ + VI +++ + T+ L I ++
Sbjct: 312 DELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTLGNLVNRTISMTNKYF 371
Query: 340 TSTSKG---------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
P + + L AI + L + K D
Sbjct: 372 GGNVTDKGVTEEVDADLRAITENTPKAVDEKMDKLRVADAITEIFNLFKRCNKYID 427
>gi|315185895|gb|EFU19660.1| methionyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
Length = 719
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 41/165 (24%), Gaps = 19/165 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEH 87
P V + H+GN ++ DV R R E YV TD RA +E
Sbjct: 12 PYVNNVPHLGNLIQVLSADVFARYCRSAGYETL--YVCG-TDEYGTA----TETRALEEG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
S + + + +T H + + +G+
Sbjct: 65 IS------PKELCDRFHAIHTEIYEWFEIQFDKWGRTSTPEHTRITQDIFLKLDRNGYIK 118
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
E + ++ S R +
Sbjct: 119 ERTIQQLYSEKSDMFLADRYVRGTCPHCGYEDARGDQCEHCGKLL 163
>gi|154175104|ref|YP_001407916.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
gi|112803429|gb|EAU00773.1| methionyl-tRNA synthetase [Campylobacter curvus 525.92]
Length = 636
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 45/186 (24%), Gaps = 22/186 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D R R TY T D+ KI + A+ +
Sbjct: 14 VNDVPHIGHAYTTIIADTFARFKRLQGHP---TYFM--TGTDEHGQKIEQAAKARGKT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + +F H R T+ ++ + + E
Sbjct: 67 ----PKEYADEISAKFRTLWDEFEIS-YDHFIRTTDEEHKLTAQNVFSKMQANGDIYKGE 121
Query: 152 ----IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ K L K + +++
Sbjct: 122 YEGFYCVSCETFFTATQLLDDNCCPDCGRKTSIVKEESYFFR---LSKYQDALLKWYKND 178
Query: 208 WGRGRP 213
P
Sbjct: 179 ELCVIP 184
>gi|259047680|ref|ZP_05738081.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
gi|259035871|gb|EEW37126.1| methionine--tRNA ligase [Granulicatella adiacens ATCC 49175]
Length = 670
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R + + +T D+ KI E+A++ S
Sbjct: 22 HIGHAYTTVASDAMVRYKKLQGFDTYF-----LTGTDEHGQKIQEKAKEAGVSEI----- 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K L H + + Q ++ +G Y E +
Sbjct: 72 -EFVDKIIFGIQDLWKELDISYDDFIRTTQPRHTKAVQKIFQKLVDNGDIYLGEYEGWYS 130
Query: 156 TSSIPNYGS 164
S +
Sbjct: 131 VSDEEYFTE 139
>gi|126459305|ref|YP_001055583.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
gi|166231634|sp|A3MU00|SYL_PYRCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|126249026|gb|ABO08117.1| leucyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 946
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R +V DV+ R R+
Sbjct: 49 IHIGHGRTYLVADVMARFRRHLGYN 73
>gi|83593036|ref|YP_426788.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
gi|83575950|gb|ABC22501.1| methionyl-tRNA synthetase [Rhodospirillum rubrum ATCC 11170]
Length = 519
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 26/183 (14%), Positives = 50/183 (27%), Gaps = 11/183 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + + +
Sbjct: 17 VNDKPHIGHAYTTLACDVLARFKRLDGFD--VKFLTG-TD-----EHGQKVQKSATAAGI 68
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHG--HAYEANNE 151
T + + F + H L ++ G +
Sbjct: 69 DPQTFTDRVSANFRDLAAAMNFSNDAFIRTTEPRHKEACKALWTLLVERGEIYLDAYRGW 128
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + T P ++ ++ F L K P+ + +
Sbjct: 129 YAVRDEAFYGEDELTTAADGSRLAPTGAPVEWVEEPSYFFRLSKWQQPLLDLYAARPDFI 188
Query: 212 RPG 214
P
Sbjct: 189 APD 191
>gi|332157706|ref|YP_004422985.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
gi|331033169|gb|AEC50981.1| arginyl-tRNA synthetase [Pyrococcus sp. NA2]
Length = 629
Score = 45.1 bits (105), Expect = 0.022, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR I+ DV+ R+LR+ V +N IDD
Sbjct: 135 HMGHARNAILGDVMARILRFLGYTVEV---QNY--IDD 167
>gi|283469782|emb|CAQ48993.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ST398]
Length = 657
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 15/153 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
Y + + +
Sbjct: 129 VPDETYYTESQLVDPQYENGKIIGGKSPDSGHQ 161
>gi|15595004|ref|NP_212793.1| lysyl-tRNA synthetase [Borrelia burgdorferi B31]
gi|226320504|ref|ZP_03796070.1| lysyl-tRNA synthetase [Borrelia burgdorferi 29805]
gi|6226184|sp|O51603|SYK_BORBU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|2688588|gb|AAC67006.1| lysyl-tRNA synthetase [Borrelia burgdorferi B31]
gi|226234146|gb|EEH32861.1| lysyl-tRNA synthetase [Borrelia burgdorferi 29805]
Length = 521
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQVGFRHLSVISQIFE--NNINKILNYLKNVQE 400
>gi|15233258|ref|NP_191100.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
methionine-tRNA ligase/ nucleotide binding [Arabidopsis
thaliana]
gi|7076783|emb|CAB75898.1| methionyl-tRNA synthetase (AtcpMetRS) [Arabidopsis thaliana]
gi|332645858|gb|AEE79379.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
Length = 616
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 51/188 (27%), Gaps = 18/188 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + P
Sbjct: 80 VNAPPHMGSAYTTIAADSIARFQRLLG--KKVIF---ITGTDEHGEKIATSAAANGRNPP 134
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ +I+ + KD + H + + +G Y
Sbjct: 135 --EHCDLISQSY-RTLWKDLDI--AYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYE 189
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + V K F L K P+E
Sbjct: 190 GLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYF---FALSKYQKPLEDILAQNPR 246
Query: 210 RGRPGWHI 217
+P + +
Sbjct: 247 FVQPSYRL 254
>gi|21282174|ref|NP_645262.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49485354|ref|YP_042575.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MSSA476]
gi|297207407|ref|ZP_06923846.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300910366|ref|ZP_07127819.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
gi|25009356|sp|Q8NY00|SYM_STAAW RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|60390700|sp|Q6GBZ8|SYM_STAAS RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|21203610|dbj|BAB94310.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MW2]
gi|49243797|emb|CAG42222.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
aureus MSSA476]
gi|296887970|gb|EFH26864.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
51811]
gi|300888355|gb|EFK83542.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH70]
Length = 657
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|229014224|ref|ZP_04171345.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
gi|228747178|gb|EEL97060.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides DSM 2048]
Length = 544
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 50/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+Q+ ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PITIRAKQDGVTV----- 65
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
I K ++F + L T +H ++ + + +
Sbjct: 66 -KEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|225448593|ref|XP_002278465.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|297736535|emb|CBI25406.3| unnamed protein product [Vitis vinifera]
Length = 334
Score = 45.1 bits (105), Expect = 0.023, Method: Composition-based stats.
Identities = 5/45 (11%), Positives = 19/45 (42%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ ++ ++ L +R + ++ AD + ++ G+ +
Sbjct: 164 DPRESASVPGELQILAVQRAKARSERNYAKADALHDKIIDAGYRV 208
>gi|258448031|ref|ZP_05696161.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
gi|257858721|gb|EEV81594.1| methionyl-tRNA synthetase [Staphylococcus aureus A6224]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|258424475|ref|ZP_05687354.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
gi|257845344|gb|EEV69379.1| methionyl-tRNA synthetase [Staphylococcus aureus A9635]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTKERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|158320039|ref|YP_001512546.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|187645698|sp|A8MG12|SYM1_ALKOO RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|158140238|gb|ABW18550.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 540
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 27/174 (15%), Positives = 51/174 (29%), Gaps = 19/174 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
H+G+ ++ DV+ R R + V YV D I RA+ E N +
Sbjct: 17 HLGHVAALLPGDVMARYFRAKG--ENVLYVSG----SDCHGTPISIRAKNE------NVS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEII 153
I + ++F L + R H ++ +I+ + + YE E +
Sbjct: 65 PQEIAEQYHKEFKYCFEELGFS-YDYYSRTDDAYHKEEVQRIIKLLYENEFIYEKEVEQL 123
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ I ++ + L + P
Sbjct: 124 YCADCNQFLPDRFVEGICPVCKNIARGDQCDVCSTILDPLDLHHRKCKICGSEP 177
>gi|326804011|ref|YP_004321829.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
gi|326650118|gb|AEA00301.1| methionine--tRNA ligase [Aerococcus urinae ACS-120-V-Col10a]
Length = 666
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 27/158 (17%), Positives = 47/158 (29%), Gaps = 23/158 (14%)
Query: 11 LERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ F P +Y HIGN+ I D + R R E V +
Sbjct: 1 MTNTKEPFYVTTP----IYY----PSGQLHIGNSYSTIAADTIARYKRLMGHE--VFF-- 48
Query: 71 NITDIDD---KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-T 126
+T D+ KI ++A +E S + + K L
Sbjct: 49 -LTGADEHGLKIQQKAEEEGIS------PKAYVDRMAEGMQKLWKSLDISNDKFIRTTDD 101
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
H+ + + + ++ G Y E + S +
Sbjct: 102 YHVKAVQDIFEQLLDQGDIYLGEYEGWYSVSDEEYFTE 139
>gi|317178659|dbj|BAJ56447.1| methionyl-tRNA synthetase [Helicobacter pylori F30]
Length = 650
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S + +++ + +
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRE 153
>gi|37522592|ref|NP_925969.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
gi|35213593|dbj|BAC90964.1| methionyl-tRNA synthetase [Gloeobacter violaceus PCC 7421]
Length = 516
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 59/184 (32%), Gaps = 11/184 (5%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A P + D + R R + V +V T D+ KI +A + H +
Sbjct: 14 VNALPHIGSAYPTLAADAVARYHRLRG--RSVRFV---TGTDEYGLKIERQAAERHLTP- 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI-YLIQNIILHGHAYEANN 150
+ + I + + + + T PR + + Q ++ Y
Sbjct: 68 -REHCNEIAAGFEKLWRALSIDYDRFIRTTDPRHAAIVREFFERCWQAGDIYKGRYTGLY 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
I + + + + P + + F L + +E ++
Sbjct: 127 CIDCEEFKKKPDEDYFIENGEPRCKIHLKPLREQDEENYIFALSRYQQKLEQYFDEHPEF 186
Query: 211 GRPG 214
+P
Sbjct: 187 VQPD 190
>gi|258544639|ref|ZP_05704873.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
gi|258520120|gb|EEV88979.1| cysteine--tRNA ligase [Cardiobacterium hominis ATCC 15826]
Length = 40
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 10/42 (23%), Positives = 17/42 (40%), Gaps = 7/42 (16%)
Query: 410 EKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNG 451
E + R+ AD IR +L ++G I++D
Sbjct: 3 EADILARINAR-------ADTIRAELAAQGIIIKDTAGGVEW 37
>gi|307128536|ref|YP_003880566.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
gi|306482998|gb|ADM89868.1| methionyl-tRNA synthetase [Candidatus Sulcia muelleri CARI]
Length = 549
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 26/169 (15%), Positives = 46/169 (27%), Gaps = 16/169 (9%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPI 92
HIG+ + D+ R L+Y K V ++ TD + I +A++E +
Sbjct: 18 GPIHIGHLSGVYLPADIFVRYLKYNG--KKVIFISG-TDEHGV--PITIKAKEEGLTT-- 70
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNE 151
I K K ++ L + H I + + E E
Sbjct: 71 ----KKIVDKYHILIKKSLKKIGILFDNFSRTTSKIHYKTSISFFKKLYKKKKFIERETE 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+D I + +K + P
Sbjct: 127 QYYDNKVNQFLPDRYILGICPKCNYNIAYGDQCEKCGFSISPEELIKPY 175
>gi|282915808|ref|ZP_06323576.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
gi|283768925|ref|ZP_06341834.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
gi|282320299|gb|EFB50641.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
D139]
gi|283461106|gb|EFC08192.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus H19]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|221217918|ref|ZP_03589385.1| lysyl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224533374|ref|ZP_03673968.1| lysyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225550021|ref|ZP_03770982.1| lysyl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|221192224|gb|EEE18444.1| lysyl-tRNA synthetase [Borrelia burgdorferi 72a]
gi|224513539|gb|EEF83896.1| lysyl-tRNA synthetase [Borrelia burgdorferi CA-11.2a]
gi|225369480|gb|EEG98932.1| lysyl-tRNA synthetase [Borrelia burgdorferi 118a]
gi|312148132|gb|ADQ30791.1| lysyl-tRNA synthetase [Borrelia burgdorferi JD1]
Length = 521
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGIEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVISQIFE--NNINKILNYLKNVQE 400
>gi|218249445|ref|YP_002375159.1| lysyl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|226321357|ref|ZP_03796884.1| lysyl-tRNA synthetase [Borrelia burgdorferi Bol26]
gi|218164633|gb|ACK74694.1| lysyl-tRNA synthetase [Borrelia burgdorferi ZS7]
gi|226233153|gb|EEH31905.1| lysyl-tRNA synthetase [Borrelia burgdorferi Bol26]
Length = 521
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVISQIFE--NNINKILNYLKNVQE 400
>gi|148266948|ref|YP_001245891.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|150392994|ref|YP_001315669.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|257794269|ref|ZP_05643248.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|258407213|ref|ZP_05680358.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|258420820|ref|ZP_05683756.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|258446123|ref|ZP_05694284.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|258453822|ref|ZP_05701795.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|295407379|ref|ZP_06817176.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297246459|ref|ZP_06930299.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|147740017|gb|ABQ48315.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH9]
gi|149945446|gb|ABR51382.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus JH1]
gi|257788241|gb|EEV26581.1| methionyl-tRNA synthetase [Staphylococcus aureus A9781]
gi|257841171|gb|EEV65620.1| methionyl-tRNA synthetase [Staphylococcus aureus A9763]
gi|257843212|gb|EEV67625.1| methionyl-tRNA synthetase [Staphylococcus aureus A9719]
gi|257855100|gb|EEV78042.1| methionyl-tRNA synthetase [Staphylococcus aureus A6300]
gi|257863993|gb|EEV86748.1| methionyl-tRNA synthetase [Staphylococcus aureus A5937]
gi|285816189|gb|ADC36676.1| Methionyl-tRNA synthetase [Staphylococcus aureus 04-02981]
gi|294967736|gb|EFG43768.1| methionyl-tRNA synthetase [Staphylococcus aureus A8819]
gi|297176646|gb|EFH35908.1| methionyl-tRNA synthetase [Staphylococcus aureus A8796]
gi|315128616|gb|EFT84619.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS03]
gi|329725056|gb|EGG61551.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21172]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|82750197|ref|YP_415938.1| methionyl-tRNA synthetase [Staphylococcus aureus RF122]
gi|82655728|emb|CAI80127.1| ethionyl-tRNA synthetase [Staphylococcus aureus RF122]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|15923480|ref|NP_371014.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
gi|15926167|ref|NP_373700.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|156978818|ref|YP_001441077.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|253316233|ref|ZP_04839446.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
CF-Marseille]
gi|253735224|ref|ZP_04869389.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|255005283|ref|ZP_05143884.2| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50-omega]
gi|258429606|ref|ZP_05688280.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|269202110|ref|YP_003281379.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|282895097|ref|ZP_06303317.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
gi|296276555|ref|ZP_06859062.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus MR1]
gi|54039687|sp|P67579|SYM_STAAN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|54042047|sp|P67578|SYM_STAAM RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|13700380|dbj|BAB41678.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
N315]
gi|14246258|dbj|BAB56652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Mu50]
gi|156720953|dbj|BAF77370.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus Mu3]
gi|253726784|gb|EES95513.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
TCH130]
gi|257849665|gb|EEV73632.1| methionyl-tRNA synthetase [Staphylococcus aureus A9299]
gi|262074400|gb|ACY10373.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED98]
gi|282762515|gb|EFC02655.1| methionyl-tRNA synthetase [Staphylococcus aureus A8117]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|312828985|emb|CBX33827.1| methionyl-tRNA synthetase (Methionine--tRNA ligase)(MetRS)
[Staphylococcus aureus subsp. aureus ECT-R 2]
Length = 657
Score = 45.1 bits (105), Expect = 0.024, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|329731069|gb|EGG67441.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21193]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|115398011|ref|XP_001214597.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
gi|114192788|gb|EAU34488.1| hypothetical protein ATEG_05419 [Aspergillus terreus NIH2624]
Length = 578
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 55/163 (33%), Gaps = 16/163 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ MI+ DVL R R G+ + +T D+ KI + A
Sbjct: 64 VNAAPHVGHLYTMIIADVLKRW-RALAGDTD---AQLLTGTDEHGMKIQQAAAAAGMDTQ 119
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ T + + A + H R T+ H + Y + + G+ Y +
Sbjct: 120 AFCDMNFKT-------FEALAKAANMDYNHFIRTTDAAHKEAVQYFWEMLDHRGYIYTSK 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+E + S Y + + G + ++
Sbjct: 173 HEGWYSVSDETFYPQSQVQNSLDPTTGRKRMVSAETGKAVEWS 215
>gi|328950695|ref|YP_004368030.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
gi|328451019|gb|AEB11920.1| Methionyl-tRNA synthetase [Marinithermus hydrothermalis DSM 14884]
Length = 632
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 26/181 (14%), Positives = 50/181 (27%), Gaps = 19/181 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A IV D L R R + +T D +KI + A++
Sbjct: 14 VNAEPHIGHAYTTIVADYLARWHRLDGYDTYF-----LTGTDEHGEKIAQAAQKAGLE-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAY--EA 148
+ + +F + L + H + ++Q + G Y E
Sbjct: 67 ----PKAFVDRVSARFREAWAALGIAYDDFIRTTEERHKAVVRAVLQKVYDAGDIYYGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWES 206
+ + + ++ Y + + P +
Sbjct: 123 EGLYCVGCERFLTEKELVDGRCPDHGVPPERRQEGNYFFRMEKYRPWLRAFIEQHPEFIR 182
Query: 207 P 207
P
Sbjct: 183 P 183
>gi|323438722|gb|EGA96462.1| methionyl-tRNA synthetase [Staphylococcus aureus O11]
gi|323442066|gb|EGA99701.1| methionyl-tRNA synthetase [Staphylococcus aureus O46]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|302332203|gb|ADL22396.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
aureus JKD6159]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|57651372|ref|YP_185421.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|88194248|ref|YP_499040.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus NCTC
8325]
gi|151220665|ref|YP_001331487.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|221142318|ref|ZP_03566811.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
JKD6009]
gi|258452829|ref|ZP_05700824.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|262049975|ref|ZP_06022834.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
gi|282925564|ref|ZP_06333217.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|284023499|ref|ZP_06377897.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus 132]
gi|304380506|ref|ZP_07363183.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|81695187|sp|Q5HII6|SYM_STAAC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|57285558|gb|AAW37652.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus COL]
gi|87201806|gb|ABD29616.1| methionyl-tRNA synthetase, putative [Staphylococcus aureus subsp.
aureus NCTC 8325]
gi|150373465|dbj|BAF66725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus str.
Newman]
gi|257859515|gb|EEV82368.1| methionyl-tRNA synthetase [Staphylococcus aureus A5948]
gi|259161910|gb|EEW46493.1| methionyl-tRNA synthetase [Staphylococcus aureus D30]
gi|269940061|emb|CBI48437.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
aureus TW20]
gi|282592468|gb|EFB97480.1| methionyl-tRNA synthetase [Staphylococcus aureus A9765]
gi|302750380|gb|ADL64557.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
aureus str. JKD6008]
gi|304340951|gb|EFM06874.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus ATCC
BAA-39]
gi|320139424|gb|EFW31302.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA131]
gi|329313208|gb|AEB87621.1| Methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
T0131]
gi|329729770|gb|EGG66167.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus 21189]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|49482717|ref|YP_039941.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA252]
gi|257424601|ref|ZP_05601029.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257429904|ref|ZP_05606290.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257432607|ref|ZP_05608969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257435511|ref|ZP_05611561.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282903075|ref|ZP_06310967.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|282904865|ref|ZP_06312725.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282907812|ref|ZP_06315650.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282910128|ref|ZP_06317934.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282913317|ref|ZP_06321108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282918271|ref|ZP_06326011.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282923022|ref|ZP_06330708.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|283957279|ref|ZP_06374737.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|293500366|ref|ZP_06666218.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|293509304|ref|ZP_06668020.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
gi|293515893|ref|ZP_06670583.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|295427024|ref|ZP_06819661.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297591600|ref|ZP_06950237.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|60390704|sp|Q6GJI1|SYM_STAAR RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|49240846|emb|CAG39513.1| putative methionyl-tRNA synthetase [Staphylococcus aureus subsp.
aureus MRSA252]
gi|257272628|gb|EEV04748.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
55/2053]
gi|257279420|gb|EEV10015.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
68-397]
gi|257282472|gb|EEV12605.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
E1410]
gi|257285148|gb|EEV15265.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M876]
gi|282314541|gb|EFB44928.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C101]
gi|282317837|gb|EFB48206.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
C427]
gi|282322788|gb|EFB53108.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M899]
gi|282325976|gb|EFB56282.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WBG10049]
gi|282328288|gb|EFB58563.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
WW2703/97]
gi|282331982|gb|EFB61491.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
Btn1260]
gi|282596501|gb|EFC01461.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus C160]
gi|283791203|gb|EFC30013.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
A017934/97]
gi|290921301|gb|EFD98359.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus M1015]
gi|291096326|gb|EFE26586.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
58-424]
gi|291467849|gb|EFF10359.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
M809]
gi|295129027|gb|EFG58656.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
EMRSA16]
gi|297575469|gb|EFH94186.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus MN8]
gi|312436421|gb|ADQ75492.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus TCH60]
gi|315193851|gb|EFU24245.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS00]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|89097430|ref|ZP_01170319.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
NRRL B-14911]
gi|89087726|gb|EAR66838.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus sp.
NRRL B-14911]
Length = 547
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 25/168 (14%), Positives = 41/168 (24%), Gaps = 22/168 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R E V YV N T I RA+ E S
Sbjct: 17 HLGHIASLLPGDILARYYRMKGEE--VLYVSGSDCNGT----PIAIRAKHEGKSA----- 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEANNEI 152
I + + F +L R +H + + +
Sbjct: 66 -KEIADRYHRDFAASFEQLGF-TYDLYTRTDAPHHHQTVQEVFLSLLENGHLVPRTIEQT 123
Query: 153 IFDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
T + + +L K
Sbjct: 124 YCRTCVQFLPDRYVEGVCPSCGSQARGDQCDACSAILEPADLLDKSCK 171
>gi|253730957|ref|ZP_04865122.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
gi|253725307|gb|EES94036.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH959]
Length = 657
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|225548982|ref|ZP_03769959.1| lysyl-tRNA synthetase [Borrelia burgdorferi 94a]
gi|225370585|gb|EEH00022.1| lysyl-tRNA synthetase [Borrelia burgdorferi 94a]
Length = 521
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPQNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPIVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGIEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVISQIFE--NNINKILNYLKNVQE 400
>gi|88607461|ref|YP_505630.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
gi|88598524|gb|ABD43994.1| methionyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
Length = 513
Score = 45.1 bits (105), Expect = 0.025, Method: Composition-based stats.
Identities = 25/135 (18%), Positives = 44/135 (32%), Gaps = 13/135 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ ++ DVL R R V + T D+ KI E AR+ P
Sbjct: 15 VNDVPHIGHFYTTLISDVLARFKRLDG--DNVKFT---TGTDEHGQKIEETARKRG--TP 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + ++ + K + + H ++ L + G Y+ +
Sbjct: 68 VLQFVDEVSESFRELVHKSGFCA---DDFIRTTESRHKDAVVALWDRLYSRGQIYKGSYA 124
Query: 152 IIFDTSSIPNYGSFS 166
+ Y
Sbjct: 125 GFYSVRDETFYQERD 139
>gi|298693820|gb|ADI97042.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
ED133]
Length = 657
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|156081857|ref|XP_001608421.1| methionine- tRNA ligase [Plasmodium vivax SaI-1]
gi|148800992|gb|EDL42397.1| methionine- tRNA ligase, putative [Plasmodium vivax]
Length = 886
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 45/341 (13%), Positives = 94/341 (27%), Gaps = 70/341 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +++ D + R + + V + T D+ KI +A +
Sbjct: 231 VNGDPHIGHAYEIVLADAIARY--HKNIGRKVFFT---TGADEHGLKIANQAARN----- 280
Query: 92 INDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
N + +N +F + L + H + + Y
Sbjct: 281 -NLTPQELCDRNVLKFKELNKLLHVDEDYYVRTTCEQHKKIAQEIWTKCEENKDIYLGEY 339
Query: 151 EIIFDTSSIPNYGSF------------------------------SRRKIDEQKMGTRVP 180
E ++ ++++ + M
Sbjct: 340 EGWYNVREETYVPENEAKLMNYRDPLNNIKLEKMKEPSYFFNMSKYQQRLIDYIMENPHF 399
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRP-----------------GWHIECSAMS 223
+ +K K + + G P ++ C +
Sbjct: 400 IQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDHKHVMYVWMDALINYYSNCFIVE 459
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
D+H G D+++ H + + ++ H L +G+KMSKS G
Sbjct: 460 GKEDYWPADVHLIGKDIVWFHTVIFPTILMSVNVALPKS-VFCHGFVLAGDGKKMSKSLG 518
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
N + E++E+ + R ++ R
Sbjct: 519 NVVNPFEIIES-------YGPDAFRFHVIKETKRGFDMRFD 552
>gi|296445799|ref|ZP_06887751.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
gi|296256627|gb|EFH03702.1| methionyl-tRNA synthetase [Methylosinus trichosporium OB3b]
Length = 516
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 41/132 (31%), Gaps = 15/132 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D R R + V +V T +D+ K+ A +E +
Sbjct: 11 GAPHIGHAYERIATDAFARFKRLDGYD--VLFV---TGMDEHGQKMQRTAEREGLT---- 61
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + QF L LA H ++ + + + G Y A
Sbjct: 62 --PQQLADRTAAQFQTMGETLNALADDVVRTTQPRHAATVLEIWRRMEAAGDIYLAKYCG 119
Query: 153 IFDTSSIPNYGS 164
+ Y
Sbjct: 120 WYSVRDEAYYDE 131
>gi|257427267|ref|ZP_05603668.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
gi|257275918|gb|EEV07386.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
65-1322]
Length = 657
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGKYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|50955324|ref|YP_062612.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
gi|50951806|gb|AAT89507.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str. CTCB07]
Length = 529
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 25/151 (16%), Positives = 43/151 (28%), Gaps = 16/151 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + + +T D+ KI+ A +
Sbjct: 16 VNDVPHIGHAYTEVAADVLARWRRQAGDDTWL-----LTGTDEHGQKILRTATANGTT-- 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + +A R T H + +Q + G Y
Sbjct: 69 ----PKEWADRLVRDEWLPLLTTVDIANDDFIRTTDERHEKNVQKFLQKLYDDGFIYAGE 124
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
E ++ + +V
Sbjct: 125 YEALYCVGCEEFKPQSEIVDGTGEYADQKVC 155
>gi|259481569|tpe|CBF75211.1| TPA: methionyl-tRNA synthetase, putative (AFU_orthologue;
AFUA_4G07820) [Aspergillus nidulans FGSC A4]
Length = 569
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 54/425 (12%), Positives = 111/425 (26%), Gaps = 71/425 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ D+L R + + +T D+ KI + A
Sbjct: 64 VNAAPHVGHLYTMVLADILKRWRTLTGDNE----AQLLTGTDEHGMKIQQAANAAGIDTQ 119
Query: 92 IN-----DAISIITS----------KNTQQFVKDTTRLACLAPTH--QPRATNHIPQM-- 132
+ + T+ K+ + H + H
Sbjct: 120 AFCDRNCLTFKALAEAANVDYNYFIRTTEPAHKEAVQYFWEMLQHRGYIYTSKHEGWYSV 179
Query: 133 -----IYLIQNIILHGHAYEANNEIIFDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHK 185
Q + A + +T + S ++ + K
Sbjct: 180 SDETFYPQSQVNLSLDPATGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLLELYKTDF 239
Query: 186 KNPADFI--LWKRS-------TPMEPGWESPWGRGRPGWHIECSAMSSH----------- 225
P + + K + P WG P + + +
Sbjct: 240 ITPTHYTEQVVKSVASGLSDLSISRPVERLTWGIPVPNDNTQTIYVWLDALVNYLTKAGY 299
Query: 226 --------YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK 277
LG D+H G D++ H A D + + + K
Sbjct: 300 PFPPGEGSRLGWPADVHVVGKDIVRFHCVYWPAFLMALD--LPLPRNVLVHAHWTMNREK 357
Query: 278 MSKSNGNFITINELLETKKFGG-RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
MSKS GN + ++ R + A LA + I ++ + +
Sbjct: 358 MSKSTGNVVNPFFAIDRFGMDTMRFFLAHRGGLASDSDYDNRYIIRDYKKYLQQGLGNIA 417
Query: 337 WPQTSTSKGIIDPAVLSALY-------NDLNTVSAIQALHKLARESTKNHDLLPIFNASA 389
+KG + +++A +D ++ L + + D
Sbjct: 418 HRTIGCAKGKLRDYIINATSGNSPATADDQAYQKTLEQLSHKVAKCMEALDPRAALEEIV 477
Query: 390 HILGI 394
++ +
Sbjct: 478 EVILL 482
>gi|56750417|ref|YP_171118.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81299951|ref|YP_400159.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
gi|56685376|dbj|BAD78598.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 6301]
gi|81168832|gb|ABB57172.1| methionyl-tRNA synthetase [Synechococcus elongatus PCC 7942]
Length = 525
Score = 45.1 bits (105), Expect = 0.026, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 57/182 (31%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R + V IT D+ KI A + P
Sbjct: 14 VNDVPHIGSAYTTIAADAIARF--HRLQGDRVLM---ITGSDEHGQKIQRTAEKNGK--P 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + I ++ + R + T PR H + + + G Y +
Sbjct: 67 PQEHCNAIVARFQDLWQLLNIRYDRFSRTTDPR---HQAIVEVFYRRVEAQGDIYVGRQQ 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + + T ++ + F L + +E + +
Sbjct: 124 GWYCVACEEFKEERDLLEDKRCPIHTNQAVEWRDEENYFFRLSRYQEALEAHYAANPDFI 183
Query: 212 RP 213
+P
Sbjct: 184 QP 185
>gi|327490158|gb|EGF21946.1| methionine--tRNA ligase [Streptococcus sanguinis SK1058]
Length = 665
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDS 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ K + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKKLWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|307718175|ref|YP_003873707.1| hypothetical protein STHERM_c04620 [Spirochaeta thermophila DSM
6192]
gi|306531900|gb|ADN01434.1| hypothetical protein STHERM_c04620 [Spirochaeta thermophila DSM
6192]
Length = 530
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
YVC G T HIGN R +I +++ R LR K V ++
Sbjct: 30 YVCASGITPSGTVHIGNFREIISVELVVRALRDLG--KDVRFI 70
>gi|257792394|ref|YP_003183000.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
gi|257476291|gb|ACV56611.1| methionyl-tRNA synthetase [Eggerthella lenta DSM 2243]
Length = 529
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 15/144 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A I D + R R + V +V T +D+ K+ + A + +
Sbjct: 15 VNAAPHLGTAYTTIAADTVARYQRMNGYD--VAFV---TGMDEHGQKVADTAADKGMTPQ 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
F L H + Q++ G Y+ +
Sbjct: 70 DWCDSMEPA------FRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
E + Y K DE +
Sbjct: 124 EGWYCVHEETYYAESDLEKNDEGE 147
>gi|223889426|ref|ZP_03624012.1| lysyl-tRNA synthetase [Borrelia burgdorferi 64b]
gi|223885112|gb|EEF56216.1| lysyl-tRNA synthetase [Borrelia burgdorferi 64b]
Length = 521
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGIEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVISQIFE--NNINKILNYLKNVQE 400
>gi|325833648|ref|ZP_08166097.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
gi|325485572|gb|EGC88041.1| methionine--tRNA ligase [Eggerthella sp. HGA1]
Length = 529
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 25/144 (17%), Positives = 42/144 (29%), Gaps = 15/144 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A I D + R R + V +V T +D+ K+ + A + +
Sbjct: 15 VNAAPHLGTAYTTIAADTVARYQRMNGYD--VAFV---TGMDEHGQKVADTAADKGMTPQ 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
F L H + Q++ G Y+ +
Sbjct: 70 DWCDSMEPA------FRDAWDMLGITYTDFVRTTEPRHAVTVQKFWQDLYDKGWCYKGSY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
E + Y K DE +
Sbjct: 124 EGWYCVHEETYYAESDLEKNDEGE 147
>gi|198452215|ref|XP_001358678.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
gi|198131835|gb|EAL27820.2| GA16180 [Drosophila pseudoobscura pseudoobscura]
Length = 588
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPAADVRLC---TGTDEHGTKIQQAAANHKV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
++ I+S+ + F + H + + + GH Y A +
Sbjct: 84 VDQYCQEISSRYREVFQAAHIH---NDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ + S R + + +++ + W
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARIRPAKF 208
>gi|123968528|ref|YP_001009386.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|123198638|gb|ABM70279.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 514
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 26/182 (14%), Positives = 45/182 (24%), Gaps = 17/182 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I+ D + R R E V + IT +D+ KI A ++ P
Sbjct: 12 VNDKPHLGSVYTTIICDSIARYKRLAGEE--VIF---ITGVDEHGLKIQRTANEKGI--P 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
I+ + + + NH + + + Y
Sbjct: 65 PKSHCDEISEIFNNNW---KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQK 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP--MEPGWESP 207
+ S + K EP + P
Sbjct: 122 GWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIEP 181
Query: 208 WG 209
Sbjct: 182 IE 183
>gi|288554646|ref|YP_003426581.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288545806|gb|ADC49689.1| methionyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 666
Score = 45.1 bits (105), Expect = 0.027, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 39/131 (29%), Gaps = 15/131 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A ++ +
Sbjct: 21 HIGHAYTTVAGDAMARYKRLRGYD--VRY---LTGTDEHGQKIEQKAAEKGLT------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 QQFVDEIVADIQSLWKKLDISYDDFIRTTEDRHKKVVQTIFERLLEQGDIYLDEYEGWYS 129
Query: 156 TSSIPNYGSFS 166
Y
Sbjct: 130 IPDETFYTELQ 140
>gi|289208948|ref|YP_003461014.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
gi|288944579|gb|ADC72278.1| methionyl-tRNA synthetase [Thioalkalivibrio sp. K90mix]
Length = 678
Score = 45.1 bits (105), Expect = 0.028, Method: Composition-based stats.
Identities = 27/165 (16%), Positives = 45/165 (27%), Gaps = 17/165 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R E V YV DD I+ +AR E
Sbjct: 19 GPIHLGHLVEYIQTDIWVRFQRARGHE--VIYVC----ADDAHGTPIMLKARAEGIEPE- 71
Query: 93 NDAISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQNIILH--GHAYE 147
+ I+ + ++ F + D HI + +I AY+
Sbjct: 72 -ELIARVRQEHEADFSEFLVDFDHYHSTHSDENRELAAHIYTALRDAGHIETRTIDQAYD 130
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ I + Y + D +
Sbjct: 131 PEAGMFLPDRFIKGTCPNCGAEEQYGDSCEACGATYSPLDLKDPV 175
>gi|87162044|ref|YP_493176.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|161508736|ref|YP_001574395.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294850349|ref|ZP_06791082.1| metS [Staphylococcus aureus A9754]
gi|87128018|gb|ABD22532.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
USA300_FPR3757]
gi|160367545|gb|ABX28516.1| methionine--tRNA ligase [Staphylococcus aureus subsp. aureus
USA300_TCH1516]
gi|294822773|gb|EFG39209.1| metS [Staphylococcus aureus A9754]
gi|315196171|gb|EFU26527.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
CGS01]
gi|320144201|gb|EFW35969.1| methionyl-tRNA synthetase [Staphylococcus aureus subsp. aureus
MRSA177]
Length = 657
Score = 45.1 bits (105), Expect = 0.028, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKSGKTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKQLWAKLEISNDDFIRTTEERHKHVVEQVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|41407070|ref|NP_959906.1| methionyl-tRNA synthetase [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|41395421|gb|AAS03289.1| MetS [Mycobacterium avium subsp. paratuberculosis K-10]
Length = 519
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 15/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
H+G+A I D + R R + V + +T D+ K++E A E
Sbjct: 15 GDPHVGHAYEYIATDAIARFKRLDGFD--VRF---LTGTDEHGLKMVETAAAEGIGT--- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +N+ F + RL +H + + + G Y +
Sbjct: 67 ---AELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + + +D+ ++
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFR 166
>gi|315185373|gb|EFU19146.1| lysyl-tRNA synthetase [Spirochaeta thermophila DSM 6578]
Length = 530
Score = 44.7 bits (104), Expect = 0.028, Method: Composition-based stats.
Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 29 YVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
YVC G T HIGN R +I +++ R LR K V ++
Sbjct: 30 YVCASGITPSGTVHIGNFREIISVELVVRALRDLG--KDVRFI 70
>gi|332185017|ref|ZP_08386766.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
gi|332014741|gb|EGI56797.1| methionyl-tRNA synthetase [Sphingomonas sp. S17]
Length = 518
Score = 44.7 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 53/183 (28%), Gaps = 17/183 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A M+ DV+ R R + V + T D+ K+ + AR S
Sbjct: 16 GRPHIGHAYEMVAADVIARFQRQAG--RDVLFQ---TGTDEHGLKMAQAARARGIST--- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHG--HAYEANN 150
+ + F RL +H + + + G +
Sbjct: 68 ---REFADEMSSYFHVMADRLDISYDRFIRTVDADHYAASQAIWKAMQAKGDLYLDRYEG 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + + + + P ++ + F L K P+ +
Sbjct: 125 WYSVRDEAFYDEAELTLGEDGTKLSPQGTPVEWTAEETWFFRLSKYQQPLLDLYRDNPDF 184
Query: 211 GRP 213
RP
Sbjct: 185 IRP 187
>gi|308063822|gb|ADO05709.1| methionyl-tRNA synthetase [Helicobacter pylori Sat464]
Length = 650
Score = 44.7 bits (104), Expect = 0.029, Method: Composition-based stats.
Identities = 63/449 (14%), Positives = 116/449 (25%), Gaps = 84/449 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + ++ + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKI-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNAS 388
+ L + ++ +H++ + H L
Sbjct: 359 NLLNRLLGMAKKYFNHSLKSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNV 418
Query: 389 AHILGIEVCKEHL----NKNISIAIEKLV 413
L + KE N S +E L+
Sbjct: 419 YDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|118465949|ref|YP_880395.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
gi|118167236|gb|ABK68133.1| methionyl-tRNA synthetase [Mycobacterium avium 104]
Length = 519
Score = 44.7 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 48/163 (29%), Gaps = 15/163 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
H+G+A I D + R R + V + +T D+ K++E A E
Sbjct: 15 GDPHVGHAYEYIATDAIARFKRLDGFD--VRF---LTGTDEHGLKMVETAAAEGIGT--- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + +N+ F + RL +H + + + G Y +
Sbjct: 67 ---AELARRNSDVFQRLQERLNISFDRFIRTTDPDHHEASKAIWRRMQAAGDIYLDSYSG 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + + +D+ ++
Sbjct: 124 WYSVRDERFFVESETKVLDDGTRVAAETGAPLTWTEEQTYFFR 166
>gi|319654959|ref|ZP_08009033.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
gi|317393384|gb|EFV74148.1| methionyl-tRNA synthetase [Bacillus sp. 2_A_57_CT2]
Length = 654
Score = 44.7 bits (104), Expect = 0.030, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 41/151 (27%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI E+A ++ +
Sbjct: 22 HIGHAYTTVAGDAMARYKRMRGFD-----VMYLTGTDEHGQKIQEKAEEKGIT------P 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---HAYEANNEII 153
+ + +L + Q++ I ++ + E
Sbjct: 71 QQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKQIVEKIFAQLVEQGDIYLGEYEGWYC 130
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 131 TPCESYYTERQLVDGNCPDCGRPVHKVKEES 161
>gi|310778457|ref|YP_003966790.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
gi|309747780|gb|ADO82442.1| methionyl-tRNA synthetase [Ilyobacter polytropus DSM 2926]
Length = 637
Score = 44.7 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 61/425 (14%), Positives = 104/425 (24%), Gaps = 92/425 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + V + +T D+ K+ E AR++ +
Sbjct: 14 VNGDPHVGSAYTTIAADVIARYKKTMGYD--VFF---LTGTDEHGQKVEETAREKGFT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K +F L H + +++ + G Y+
Sbjct: 67 ----PQEWTDKMAPRFEDMWNLLNVSHDDFIRTTQIRHKKAVTKILKKVYEKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS------------------RRKIDEQKMGTRVPEKYHKKNPADFI 192
E + S + + H + DFI
Sbjct: 123 EGKYCVSCETYVPENQIVGENGCPDCGKDLRVVKEESYFFKMSKYQDALLEHIEKHPDFI 182
Query: 193 LWKRSTPMEPGW-----------ESPWGRGRPGWHI----------------------EC 219
L + + + G P
Sbjct: 183 LPHSRKNEVISFVKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENN 242
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
M + +H G D++ H A EK + + +G+ +EG KMS
Sbjct: 243 LDMFQKFWNDGEVVHLLGKDILRFHAIIWPCMLLAA--EEKLPDKIVAHGWWTVEGEKMS 300
Query: 280 KSNGNFITINELLETKKFGGRSW-------PAPVIRLAMLMTHYREPIDFTVQR------ 326
KS GN I E + + R D
Sbjct: 301 KSKGNVIDPQAETERYGRDPFRYFLMREVHFGNDGDYSTTSMVNRINADLANDLGNLLNR 360
Query: 327 -----LTEAEILLSKWPQTSTSKGIIDPAV------LSALYNDLNTVSAIQALHKLARES 375
+ K I + + L A++A+ K
Sbjct: 361 TLGMYKKYFNSTVVKGTGHQIYDDQIKELWKETLESVEKSMSKLEFSKALEAIWKFISRM 420
Query: 376 TKNHD 380
K D
Sbjct: 421 NKYID 425
>gi|229099491|ref|ZP_04230419.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
gi|228683787|gb|EEL37737.1| Methionyl-tRNA synthetase 2 [Bacillus cereus Rock3-29]
Length = 544
Score = 44.7 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 52/167 (31%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE ++
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--ENVLYVSGSDCNGT----PITIRAKQEGVTVV---- 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
I K ++F + L + + H + + ++ G+ Y+ E +
Sbjct: 67 --EIADKYHEEFERCFHSLGFTYDCYTRTDSEYHHETVQKVFLRLLEEGYIYKKTVEQAY 124
Query: 155 DTSSIPNYGSFSRRKIDEQK---MGTRVPEKYHKKNPADFILWKRST 198
+ I + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|195329048|ref|XP_002031223.1| GM25865 [Drosophila sechellia]
gi|194120166|gb|EDW42209.1| GM25865 [Drosophila sechellia]
Length = 582
Score = 44.7 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPELDVRLC---TGTDEHGTKIQQAASLHGV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
+ I+ + + F + + + H + + + GH Y A +
Sbjct: 84 VAKYCDDISQRYREVFSSASIQ---QDDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ S R + + +++ + W
Sbjct: 141 GWYCVSDETFLTDSQLRLDEATGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKTE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARIRPAKF 208
>gi|296825514|ref|XP_002850827.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238838381|gb|EEQ28043.1| cysteinyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 601
Score = 44.7 bits (104), Expect = 0.031, Method: Composition-based stats.
Identities = 57/282 (20%), Positives = 96/282 (34%), Gaps = 51/282 (18%)
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
+T +F+ D L L P R ++P+++ + +
Sbjct: 168 LTKHYESRFIGDIRSLNVLNPDELTRVVAYVPEILCFLLRV------------------- 208
Query: 159 IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIE 218
+ + + + G PGWHIE
Sbjct: 209 --GLFILILISLRNHYAKLEHRNRNNTSSDGWRKFLTFKEFCALEGFPARGTKLPGWHIE 266
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
CSAM+S LG DI+ G+DL F HH+NE+AQ N + +L +
Sbjct: 267 CSAMTSAKLGNHMDINSRGIDLAFSHHDNEVAQ-----------NEVFSLHWASLIQAQR 315
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWP 338
++ F TI E+L + + +RE I+ T + + I K
Sbjct: 316 AQITPKFTTIREVLARST-------------IIFLGGWREGIEITTDMVDTSGIREEKL- 361
Query: 339 QTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ + SAL N +T +A+ A+ +LA T+
Sbjct: 362 -----NNFLKDKIFSALCNLFDTPTAMNAILELASSFTRAES 398
>gi|330508605|ref|YP_004385033.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
gi|328929413|gb|AEB69215.1| methionyl-tRNA synthetase [Methanosaeta concilii GP-6]
Length = 668
Score = 44.7 bits (104), Expect = 0.032, Method: Composition-based stats.
Identities = 21/169 (12%), Positives = 46/169 (27%), Gaps = 20/169 (11%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y H+G+ R + D+ R LR K V +V D I+ A
Sbjct: 6 TCGL-PYANGPCHLGHLRTYVPADIFVRGLRKMG--KEVLFVCG----SDSHGTPIVVNA 58
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILH 142
+ + ++ K Q F + + + +++ ++ +
Sbjct: 59 EAQGMT------PKALSIKYHQHFDEIFQGMEIDFDFFGDTDDPACHNRTKEMVEALMEN 112
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
G+ Y ++ + ++
Sbjct: 113 GYVYPREIDLAYCPKCERFLPDRYVEGECPYCGKPARGDECDMGCGRHL 161
>gi|113475475|ref|YP_721536.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
gi|110166523|gb|ABG51063.1| methionyl-tRNA synthetase [Trichodesmium erythraeum IMS101]
Length = 530
Score = 44.7 bits (104), Expect = 0.032, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 51/183 (27%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D L R R + V IT D+ KI A +
Sbjct: 20 VNDLPHIGSAYTTIAADTLARFQRLQG--RSVLM---ITGTDEHGQKIQRTAENKG---- 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ F +L NH + Q + Y +
Sbjct: 71 --RNPKEHCDSVVRGFESLWEQLNIQYDRFIRTTAPNHEKIVKEFFQRVWEKEDIYLSQQ 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + S + + T ++ + F L + ++ ++
Sbjct: 129 KGWYCVSCEEFKEERELTEDKHCVIHTNQKVEWRDEQNYFFRLSRYQERLQAFYQDRQEF 188
Query: 211 GRP 213
+P
Sbjct: 189 IQP 191
>gi|315638909|ref|ZP_07894081.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
gi|315481127|gb|EFU71759.1| arginine--tRNA ligase [Campylobacter upsaliensis JV21]
Length = 530
Score = 44.7 bits (104), Expect = 0.032, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAIFGDTLARVARHLGYKFDTEYYVN 151
>gi|297569842|ref|YP_003691186.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
gi|296925757|gb|ADH86567.1| methionyl-tRNA synthetase [Desulfurivibrio alkaliphilus AHT2]
Length = 510
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 48/333 (14%), Positives = 85/333 (25%), Gaps = 73/333 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A +V D + R R E + T D DKI + A
Sbjct: 12 VNAQPHLGHAYTAVVADTVSRFNRLDGREVFLQ-----TGTDEHGDKIAQAAATAGTEA- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN- 149
+ + F L +H+ + ++Q + G Y ++
Sbjct: 66 -----RDYVDRISAMFRAAWPPLLVEPDNFIRTTDPHHVAVVQQILQKVYDRGDIYFSDY 120
Query: 150 NEIIFDTSSIP-------NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-- 200
+ + + EQ + K +
Sbjct: 121 DGLYCKGCERFLTEKELVDGKCPDHLTAPEQVAEQNYFFAMSRYQQWLIDHIKANPEFIT 180
Query: 201 -------------EPGWE-------SPWGRGRPGWHIECSAMSSHYLGKVFDI------- 233
EP + S G P + + + +
Sbjct: 181 PERYRNEVLSFLSEPLEDLCISRPVSRLAWGIPLPFDQRFVTYVWFDALINYVSGIGYPD 240
Query: 234 ------------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
H D++ H A +E + +H N+ KMSKS
Sbjct: 241 GPDFARRWAGAEHLIAKDIL-KPHAIFWPTMLKAMGLEPYRRLHVHGY-WNVGETKMSKS 298
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
GN + E++ + A IR +L
Sbjct: 299 IGNVVRPEEMVAA-------FGADTIRYFLLRE 324
>gi|89101166|ref|ZP_01173999.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
NRRL B-14911]
gi|89084134|gb|EAR63302.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
NRRL B-14911]
Length = 653
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 20/148 (13%), Positives = 42/148 (28%), Gaps = 11/148 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI ++A ++ + + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGYD-----VMYLTGTDEHGQKIQQKAEEKGVTPQ--EYV 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I + K T Q R + ++ + + E
Sbjct: 75 DEIVDGIKDLWSKLDISYDDFIRTTQDRHKQVVEKIFARLLEQGDI-YLGEYEGWYCTPC 133
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 134 ESYFTERQLVDGNCPDCGRPVNKVKEES 161
>gi|57505428|ref|ZP_00371356.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
gi|57016253|gb|EAL53039.1| arginyl-tRNA synthetase [Campylobacter upsaliensis RM3195]
Length = 530
Score = 44.7 bits (104), Expect = 0.033, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAIFGDTLARVARHLGYKFDTEYYVN 151
>gi|297622706|ref|YP_003704140.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
gi|297163886|gb|ADI13597.1| arginyl-tRNA synthetase [Truepera radiovictrix DSM 17093]
Length = 607
Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 17/68 (25%), Positives = 29/68 (42%), Gaps = 6/68 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
AH+G+ R +++ D + R+LR E V +N IDD +A + ++ A
Sbjct: 120 AHVGHLRNIVLGDAVARILRAAGYEVEV---QNY--IDD-TGRQAAESLFAVGYFGATYD 173
Query: 99 ITSKNTQQ 106
K
Sbjct: 174 GAEKYDHW 181
>gi|187923016|ref|YP_001894658.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187714210|gb|ACD15434.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 711
Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD I+ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYV----GADDTHGTPIMLRAEKEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + ++ + + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRILSENVYLALKEAGLIDARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPY 186
>gi|145332859|ref|NP_001078295.1| OVA1 (OVULE ABORTION 1); ATP binding / aminoacyl-tRNA ligase/
methionine-tRNA ligase/ nucleotide binding [Arabidopsis
thaliana]
gi|332645859|gb|AEE79380.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
Length = 533
Score = 44.7 bits (104), Expect = 0.034, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 51/188 (27%), Gaps = 18/188 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + P
Sbjct: 80 VNAPPHMGSAYTTIAADSIARFQRLLG--KKVIF---ITGTDEHGEKIATSAAANGRNPP 134
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ +I+ + KD + H + + +G Y
Sbjct: 135 --EHCDLISQSY-RTLWKDLDI--AYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYE 189
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + V K F L K P+E
Sbjct: 190 GLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYF---FALSKYQKPLEDILAQNPR 246
Query: 210 RGRPGWHI 217
+P + +
Sbjct: 247 FVQPSYRL 254
>gi|241888882|ref|ZP_04776188.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
gi|241864558|gb|EER68934.1| methionyl-tRNA synthetase [Gemella haemolysans ATCC 10379]
Length = 666
Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 53/178 (29%), Gaps = 14/178 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI--ND 94
HIG+A + D L R + + +T D+ KI ++A+++ S ++
Sbjct: 20 HIGHAYTTVACDALTRYKKLSGYDTYF-----LTGTDEHGQKIQQKAQEKGISEQAYVDE 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-YEANNEII 153
I I + + + H+ +++ + Y ++E
Sbjct: 75 MIKDIKKLWEAMDINYSKFIRTTDDYHETAVAEIFDKLVEKGDIYLGEYKGWYSISDEEY 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
F + + + + K + +K S + +
Sbjct: 135 FTETQLQEVFRDEEGNMIGGIAPSG---NEVKLVSEECYFFKMSKYADRLVKYYDEHP 189
>gi|195145300|ref|XP_002013634.1| GL23293 [Drosophila persimilis]
gi|194102577|gb|EDW24620.1| GL23293 [Drosophila persimilis]
Length = 592
Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 52/188 (27%), Gaps = 14/188 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPTADVRLC---TGTDEHGTKIQQAAANHKV--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN-N 150
++ I+S+ + F + H + + + GH Y A +
Sbjct: 84 VDQYCQEISSRYREVFQAAHIH---NDDFIRTTEERHKQAVAQFWRTLHSRGHIYSAAYS 140
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPW 208
+ + S R + + +++ + W
Sbjct: 141 GWYCVSDEVFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVRHWVKQE 200
Query: 209 GRGRPGWH 216
R RP
Sbjct: 201 ARIRPAKF 208
>gi|293399763|ref|ZP_06643909.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
gi|291306163|gb|EFE47406.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 5_2_54FAA]
Length = 656
Score = 44.7 bits (104), Expect = 0.035, Method: Composition-based stats.
Identities = 63/464 (13%), Positives = 122/464 (26%), Gaps = 102/464 (21%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIGN +++ D + R R + V + T D+ KI E+A++ +
Sbjct: 21 GRPHIGNTYEIVLTDAIARYKRQQGYD--VFFQ---TGTDEHGQKIEEKAKEAGVT---- 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
K K+ + H Q+ + + + G Y+ E
Sbjct: 72 --PKEFVDKVADIVRKNFDMMNTSYDYFVRTTDEGHERQVQKIFKKLYEQGDIYKGKYEG 129
Query: 153 IFDTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP- 207
++ T + + + + E Y + P + P
Sbjct: 130 MYCTPCESFWTESQLIDGKCPDCGRPVQKATEEAYFFNLQKYAPKLIKHIEEHPEFIQPE 189
Query: 208 -------WGRGRPGWHIECSAMSSHYLGKVF----------------------------- 231
+PG C + +S G
Sbjct: 190 SRKNEMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITSLGYDADGN 249
Query: 232 -----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
D+H G D++ H E + +L + KMSK
Sbjct: 250 HGENYKKYWPADVHIIGKDILRFHTIYWPIMLMALG--EPLPKQVFGHPWLLVGDGKMSK 307
Query: 281 SNGNFITINELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAE 331
S GN I +EL+ + I +++ + + L
Sbjct: 308 SKGNAIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERINSDLANVLGNLVNRT 367
Query: 332 ILLSKWPQTSTSKGIIDPAVLSALYND---------------LNTVSAIQALHKLAREST 376
I + ++ + D L+ AI+ + L +
Sbjct: 368 ISMQNKYFNGVISNPLECEDIDKELIDLALDTPKRVAKKMETLHVGDAIEEIFTLLKRCN 427
Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQ-ERLIL 419
K D + +LG E ++ + L++ R+
Sbjct: 428 KYID-----ETTPWVLG---KDESKKDRLATVLYNLLESIRIAA 463
>gi|257460335|ref|ZP_05625436.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
gi|257441666|gb|EEV16808.1| methionyl-tRNA synthetase [Campylobacter gracilis RM3268]
Length = 665
Score = 44.7 bits (104), Expect = 0.036, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 46/182 (25%), Gaps = 24/182 (13%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQ------ 85
V D HIG+A I+ D + R R E T D+ KI E A +
Sbjct: 12 VNDVPHIGHAYTTIIADTMARFYRLQGHEVFFK-----TGTDEHGQKIEEAAAKHAQSPK 66
Query: 86 ---EHPSIPINDAISII------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
+ S D S+ T + + + + Y +
Sbjct: 67 QYADGVSAKFKDLWDEFDISYDMFSRTTDAAHEAAVQNVFRKMYEKGDIYKGEYEGNYCV 126
Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
A + E D K+++ L K+
Sbjct: 127 SCESFFPSAQLIDGEYCPDCGKKTKILKEESY-FFRLSAYAERLLKWYEDEKCILPLGKK 185
Query: 197 ST 198
+
Sbjct: 186 NE 187
>gi|194900723|ref|XP_001979905.1| GG21397 [Drosophila erecta]
gi|190651608|gb|EDV48863.1| GG21397 [Drosophila erecta]
Length = 579
Score = 44.7 bits (104), Expect = 0.036, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 51/189 (26%), Gaps = 16/189 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ D R R Y E+ V T D+ KI + A P
Sbjct: 29 VNAAPHIGHLYSAVIADAHCRYQRLRYPEQHVRLC---TGTDEHGTKIQQAASLHGI--P 83
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN- 149
+ I+ + + + H + + + GH Y A
Sbjct: 84 VAKYCDDISQRY----REVFRSASIQPEDFIRTTEDRHKRAVANFWRTLYTRGHIYSAAY 139
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG--WESP 207
+ + S R + + +++ S + W
Sbjct: 140 SGWYCVSDETFLTDSQLRLDEASGTRYSLESGHPVEWTEETNYMFRLSQFQDDVGHWVKA 199
Query: 208 WGRGRPGWH 216
R RP
Sbjct: 200 EARIRPAKF 208
>gi|148273554|ref|YP_001223115.1| methionyl-tRNA synthetase [Clavibacter michiganensis subsp.
michiganensis NCPPB 382]
gi|147831484|emb|CAN02445.1| metS [Clavibacter michiganensis subsp. michiganensis NCPPB 382]
Length = 525
Score = 44.3 bits (103), Expect = 0.036, Method: Composition-based stats.
Identities = 25/130 (19%), Positives = 42/130 (32%), Gaps = 12/130 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R R + +T D+ KI+ A H + P
Sbjct: 16 VNDVPHIGHAYTEVAADVLARWHRQRGDDTWF-----LTGTDEHGQKILRTATA-HDTTP 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
A ++T Q ++ + H + +Q + G Y +
Sbjct: 70 QAWADRLVTESW-QPLLEAVDISN--DDFIRTTDARHEESVKIFLQRLHDAGFIYTGEYK 126
Query: 152 IIFDTSSIPN 161
+
Sbjct: 127 GYYCVGCEEY 136
>gi|307637700|gb|ADN80150.1| Methionyl-tRNA synthetase [Helicobacter pylori 908]
Length = 651
Score = 44.3 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 13/175 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAY 146
D+IS I F D + + ++++ + +
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTYSGHYCV 127
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + N + E + + +L + E
Sbjct: 128 SCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNPE 182
>gi|317490262|ref|ZP_07948750.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
gi|316910756|gb|EFV32377.1| methionyl-tRNA synthetase [Eggerthella sp. 1_3_56FAA]
Length = 529
Score = 44.3 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 23/144 (15%), Positives = 42/144 (29%), Gaps = 15/144 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A I D + R R + V +V T +D+ K+ + A + +
Sbjct: 15 VNAAPHLGTAYTTIAADTVARYQRMNGYD--VAFV---TGMDEHGQKVADTAADKGMTPQ 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
F L H + Q++ G Y+ +
Sbjct: 70 DWCDSMEPA------FRDAWDMLGITYTDFVRTTEPRHARTVQKFWQDLYDRGWCYKGSY 123
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQK 174
E + Y K ++ +
Sbjct: 124 EGWYCVHEETYYAESDLEKNEDGE 147
>gi|254171817|ref|ZP_04878493.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
gi|214033713|gb|EEB74539.1| arginyl-tRNA synthetase [Thermococcus sp. AM4]
Length = 640
Score = 44.3 bits (103), Expect = 0.037, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR ++ D + R++R + V +N IDD
Sbjct: 138 HMGHARNAVLGDTMARIMRRLGYKVEV---QNY--IDD 170
>gi|289422845|ref|ZP_06424678.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
gi|289156755|gb|EFD05387.1| methionine--tRNA ligase [Peptostreptococcus anaerobius 653-L]
Length = 647
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 51/150 (34%), Gaps = 13/150 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS--IPIND 94
HIG+A I D + R R+ + V + +T D +KI ++A++ S ++
Sbjct: 21 HIGHAYTTIAADAIARFKRFCGYD--VRF---LTGTDEHGEKIQKKAQEAGMSEIEFLDA 75
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
I+ I + + + + I +Y +I + N +
Sbjct: 76 QIADIKKLWEKLEISNDDFIRTTDKERHEVIIQKIFTKLYEQGDIYKGSY---EGNYCVP 132
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + T++ ++
Sbjct: 133 CESFWTESQMIDGHKCPDCGRETKIVKEES 162
>gi|222528338|ref|YP_002572220.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
gi|222455185|gb|ACM59447.1| methionyl-tRNA synthetase [Caldicellulosiruptor bescii DSM 6725]
Length = 653
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 37/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHIGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + H + + + G Y+
Sbjct: 68 --PQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 126 WYCTPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|332358809|gb|EGJ36632.1| methionine--tRNA ligase [Streptococcus sanguinis SK355]
Length = 665
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|256751388|ref|ZP_05492267.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
gi|256749770|gb|EEU62795.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus CCSD1]
Length = 632
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 58/419 (13%), Positives = 108/419 (25%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI AR++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAREKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SEYEGWYCT 128
Query: 135 LIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ S ++ + + +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRPVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K S + G G+ +
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTDHDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVSKYGVDAVRYFLLREVPFGADGVFSNETLINRINSDLANDLGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|299471948|emb|CBN79628.1| Methionyl-tRNA synthetase [Ectocarpus siliculosus]
Length = 613
Score = 44.3 bits (103), Expect = 0.038, Method: Composition-based stats.
Identities = 49/331 (14%), Positives = 87/331 (26%), Gaps = 68/331 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DV+ R +R E V +T D+ + E ++ +
Sbjct: 85 VNDKPHIGHAYTTLACDVIARFMRLDGRE-----VMFLTGTDE---HGQKVEASALKADK 136
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + +Q+F + T+H L + G
Sbjct: 137 SPQQFCDEVSQEFRDLLKTMNFSNDRFIRTTDTSHKVAASALWNRLQERGQISLGVYAGW 196
Query: 154 FDTSSIPNYGSF---------------------SRRKIDEQKMGTRVPEKYHKKNP---- 188
+ YG K+ E + + +
Sbjct: 197 YSVRDEAFYGEAELVDGKAPSGAEVEWVEKEPSYFFKLSEWQQPLLDFYAENPQFIAPES 256
Query: 189 -----------ADFILWKRSTPMEPGWESPWG--------------RGRPGWHIECSAMS 223
L T G P E
Sbjct: 257 RRNEAVSFVSGGLRDLSISRTSFSWGVPVPGDDEHVMYVWVDALANYISALGFPEMGEAG 316
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
D+H G D++ H A A +E +++H + +G+K+SKS G
Sbjct: 317 EFSKFWPADLHVIGKDILRFHSVYWPALLLAA-GLEPPKRLFVHG-WWTKDGQKISKSTG 374
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMT 314
N I +L+ + R ++
Sbjct: 375 NVIDPLDLVAR-------YGVDATRYFLMSE 398
>gi|297380215|gb|ADI35102.1| methionyl-tRNA synthetase [Helicobacter pylori v225d]
Length = 653
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCTISKADNTNDKVLCPDCLRE 153
>gi|205372010|ref|ZP_03224828.1| methionine-tRNA ligase/methionyl-tRNA synthetase [Bacillus
coahuilensis m4-4]
Length = 652
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 19/148 (12%), Positives = 43/148 (29%), Gaps = 11/148 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI +A +++ + + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD-----VMYLTGTDEHGQKIQRKAEEQNVTPI--EYV 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I + K T + R + ++ + + +
Sbjct: 75 DEIVKGVKDLWEKLDISYDDYIRTTESRHKQVVEKIFAQLVEQGDI-YLDQYEGWYCTPC 133
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + ++
Sbjct: 134 ESFFTERQLVDGKCPDCGREVEKVKEES 161
>gi|163840682|ref|YP_001625087.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|162954158|gb|ABY23673.1| leucyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 898
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 18 FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F +D R YVC Y H+G+A ++ DV+ R + +
Sbjct: 97 FAPLDDGSKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFD 145
>gi|328543900|ref|YP_004304009.1| methionyl-tRNA synthetase [polymorphum gilvum SL003B-26A1]
gi|326413644|gb|ADZ70707.1| Methionyl-tRNA synthetase [Polymorphum gilvum SL003B-26A1]
Length = 518
Score = 44.3 bits (103), Expect = 0.039, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 47/132 (35%), Gaps = 15/132 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R K V + +T D+ K+++ A++E S+
Sbjct: 18 GAPHIGHAYEAIATDAMARFQRLDG--KDVYF---LTGTDEHGQKMLQTAKKEGISV--- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ +N+ +F L C + H + + + +G Y+ +
Sbjct: 70 ---RELADRNSARFRDMVAALGCTNDDFIRTSEPRHHRSSQEIWRRMAANGDIYKDSYSG 126
Query: 153 IFDTSSIPNYGS 164
+ Y
Sbjct: 127 WYSVRDEAYYQE 138
>gi|325679112|ref|ZP_08158706.1| methionine--tRNA ligase [Ruminococcus albus 8]
gi|324109236|gb|EGC03458.1| methionine--tRNA ligase [Ruminococcus albus 8]
Length = 659
Score = 44.3 bits (103), Expect = 0.040, Method: Composition-based stats.
Identities = 19/163 (11%), Positives = 45/163 (27%), Gaps = 19/163 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+ + D + R R + V +T D+ KI ++AR + +
Sbjct: 15 GDPHIGHCYTTVACDSIARYKRMQGYD-----VMFLTGTDEHGQKIEDKARDKGVTPQ-- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYE--AN 149
+ + + + + ++ R T H+ + + + + G+ Y+
Sbjct: 68 QYVDEVVATFKKLW-----SYMNISYDRYIRTTDDYHVESVQKIFKELYDKGYIYKGEYT 122
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ S +
Sbjct: 123 GKYCTPCESFWTESQLDADGCCPECHRPVKEASEEAYFFKMSP 165
>gi|327304271|ref|XP_003236827.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
gi|326459825|gb|EGD85278.1| methionyl-tRNA synthetase [Trichophyton rubrum CBS 118892]
Length = 641
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-GEKCVTYVRNITDIDD---KIIERARQEHPSI 90
V HIG+ +++ D+L R G+ + +T D+ KI + A Q
Sbjct: 113 VNAAPHIGHLYTILIADILKRWQVLLGNGDAKL-----LTGTDEHGMKIQQAALQNGLE- 166
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN 149
+ +N + F + H + + +N+ G+ YE
Sbjct: 167 -----PQALCDRNCETFKVLAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGK 221
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQ 173
+E + S Y + + +
Sbjct: 222 HEGWYSVSDETFYPASAVHSTLDP 245
>gi|312623342|ref|YP_004024955.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
gi|312203809|gb|ADQ47136.1| methionyl-tRNA synthetase [Caldicellulosiruptor kronotskyensis
2002]
Length = 653
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 18/154 (11%), Positives = 37/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHIGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + H + + + G Y+
Sbjct: 68 --PQEYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 126 WYCTPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|261417229|ref|YP_003250912.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
gi|261373685|gb|ACX76430.1| methionyl-tRNA synthetase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 690
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 19/166 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG++ ++ D+L R + + +T D+ K+ A +
Sbjct: 13 VNDAPHIGHSYTTVLADILTRFHKIIGYQTFF-----LTGTDEHGQKVQRAAAKR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
N + +F ++ H + +Q + G Y
Sbjct: 63 -NVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
E + + ++ + + + +K
Sbjct: 122 EGWYSVGEERFFSE----DELDENKCDPISHRPVEWLKEKNYFFKM 163
>gi|317180163|dbj|BAJ57949.1| methionyl-tRNA synthetase [Helicobacter pylori F32]
Length = 650
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 63/449 (14%), Positives = 116/449 (25%), Gaps = 84/449 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNG 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + ++ + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKI-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNAS 388
+ L + ++ +H++ + H L
Sbjct: 359 NLLNRLLGMAKKYFNHSLKSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNV 418
Query: 389 AHILGIEVCKEHL----NKNISIAIEKLV 413
L + KE N S +E L+
Sbjct: 419 YDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|317177788|dbj|BAJ55577.1| methionyl-tRNA synthetase [Helicobacter pylori F16]
Length = 647
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRE 153
>gi|261839774|gb|ACX99539.1| methionyl-tRNA synthetase [Helicobacter pylori 52]
Length = 653
Score = 44.3 bits (103), Expect = 0.041, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRE 153
>gi|260893945|ref|YP_003240042.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
gi|260866086|gb|ACX53192.1| methionyl-tRNA synthetase [Ammonifex degensii KC4]
Length = 512
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 43/151 (28%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI A+ +
Sbjct: 16 DRLHIGHAYTTVAADTVARFKRMEGYD--VFF---LTGADEHGQKIERTAKSKGKDPQ-- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + + + T +PR ++ + +
Sbjct: 69 SYVDEIVASFKELWARLEISYDDFIRTTEPRHKVVAQKIFQKLYEQGDI-YKSTYQGWYC 127
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ K + + ++
Sbjct: 128 TPCETFWTARQLVDGKCPDCGRPVELLQEES 158
>gi|222143238|pdb|3FNR|A Chain A, Crystal Structure Of Putative Arginyl T-Rna Synthetase
From Campylobacter Jejuni
Length = 464
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 41 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 77
>gi|212223653|ref|YP_002306889.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|212008610|gb|ACJ15992.1| arginyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 642
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR ++ D + R++R V +N IDD
Sbjct: 140 HMGHARNAVLGDTMARIMRALGYNVEV---QNY--IDD 172
>gi|302328190|gb|ADL27391.1| methionine--tRNA ligase [Fibrobacter succinogenes subsp.
succinogenes S85]
Length = 693
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 20/166 (12%), Positives = 46/166 (27%), Gaps = 19/166 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG++ ++ D+L R + + +T D+ K+ A +
Sbjct: 16 VNDAPHIGHSYTTVLADILTRFHKIIGYQTFF-----LTGTDEHGQKVQRAAAKR----- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
N + +F ++ H + +Q + G Y
Sbjct: 66 -NVTPQEHVDEYYHRFEDLWKKMNIQNDFFIRTTMPEHKAYVQECLQKLWDKGEIYSKEY 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
E + + ++ + + + +K
Sbjct: 125 EGWYSVGEERFFSE----DELDENKCDPISHRPVEWLKEKNYFFKM 166
>gi|167038739|ref|YP_001661724.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300913676|ref|ZP_07130993.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307723309|ref|YP_003903060.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
gi|166852979|gb|ABY91388.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X514]
gi|300890361|gb|EFK85506.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X561]
gi|307580370|gb|ADN53769.1| methionyl-tRNA synthetase [Thermoanaerobacter sp. X513]
Length = 632
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 58/419 (13%), Positives = 115/419 (27%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI AR++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAREKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SKYEGWYCT 128
Query: 135 LIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
++ + + S+ + P+ ++ +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 191 FILWKRSTPMEPGWESPWGRGRP-------------------------GWHIECSAMSSH 225
++ + +E + S G+ +
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTDHDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFGGILPKPSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|57238047|ref|YP_179296.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|81353486|sp|Q5HTT9|SYR_CAMJR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|57166851|gb|AAW35630.1| arginyl-tRNA synthetase [Campylobacter jejuni RM1221]
gi|315058607|gb|ADT72936.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni S3]
Length = 530
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|15897428|ref|NP_342033.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284175023|ref|ZP_06388992.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|14423948|sp|P58176|SYL1_SULSO RecName: Full=Leucyl-tRNA synthetase 1; AltName:
Full=Leucine--tRNA ligase 1; Short=LeuRS 1
gi|13813661|gb|AAK40823.1| Leucyl-tRNA synthetase (leuS-1) [Sulfolobus solfataricus P2]
gi|261602113|gb|ACX91716.1| tRNA synthetase valyl/leucyl anticodon-binding protein
[Sulfolobus solfataricus 98/2]
Length = 934
Score = 44.3 bits (103), Expect = 0.042, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R I D+ R LR
Sbjct: 45 SPMHVGHGRTYITADIYARYLRMKGYN 71
>gi|328946604|gb|EGG40742.1| methionine--tRNA ligase [Streptococcus sanguinis SK1087]
Length = 665
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEESGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|221054251|ref|XP_002261873.1| methionine--trna ligase [Plasmodium knowlesi strain H]
gi|193808333|emb|CAQ39036.1| methionine--trna ligase, putative [Plasmodium knowlesi strain H]
Length = 885
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 46/320 (14%), Positives = 96/320 (30%), Gaps = 63/320 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +++ D + R + + V + T D+ KI +A +
Sbjct: 231 VNGDPHIGHAYEIVLADAIARY--HKNIGRRVFFT---TGADEHGMKIANQAARN----- 280
Query: 92 INDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
N + +N +F + L + H + + Y
Sbjct: 281 -NLTPQELCDQNVLKFKELNKLLHVDEDYYVRTTCDKHKKIAQEIWTKCEQNEDIYLGEY 339
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE----- 205
E ++ + ++ + + + K++ F + K +
Sbjct: 340 EGWYNVREETYVPENEAKLMNYRDPLNNIKLEKMKESSYFFKMSKYQERLINYIHENPHF 399
Query: 206 -------------------------SPWGRGRP-----------------GWHIECSAMS 223
+ + G P ++ C M
Sbjct: 400 IQPEQKRNEILQRLKEPLADLSCSRTKFSWGIPVPSDNKHVMYVWMDALINYYSSCFIMD 459
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
D+H G D+++ H + + ++ +++ H L +G+KMSKS G
Sbjct: 460 GKEDYWPADVHLIGKDIVWFHTVIFPSILMSVN-VDLPKSVFCHGFVLAGDGKKMSKSLG 518
Query: 284 NFITINELLETKKFGGRSWP 303
N I E++ET +
Sbjct: 519 NVINPFEIIETYGSDAFRFH 538
>gi|189083224|sp|A9WS85|SYL_RENSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
Length = 862
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 3/49 (6%)
Query: 18 FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F +D R YVC Y H+G+A ++ DV+ R + +
Sbjct: 61 FAPLDDGSKERRYVCDMFPYPSGDLHMGHAEAFVMGDVVGRYWKLKGFD 109
>gi|148926180|ref|ZP_01809865.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
gi|145845351|gb|EDK22444.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CG8486]
Length = 530
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|218562787|ref|YP_002344566.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
gi|81549216|sp|Q9PNC0|SYR_CAMJE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|112360493|emb|CAL35290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni NCTC
11168]
Length = 530
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|57168053|ref|ZP_00367192.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
gi|57020427|gb|EAL57096.1| arginyl-tRNA synthetase [Campylobacter coli RM2228]
Length = 497
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 82 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 118
>gi|332201532|gb|EGJ15602.1| tRNA synthetases class I family protein [Streptococcus pneumoniae
GA47368]
Length = 343
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 20/160 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
HIG+A ++ D+L R R E V YV N T I RA++E N +
Sbjct: 17 HIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGT----PISIRAKKE------NKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I ++F + +L R +H +Q + ++
Sbjct: 65 VKEIADFYHKEFKETFEKLGF-TYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQL 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ F K R + + D I
Sbjct: 124 YCTFDNQFLPDRFVEGKCPNCGTHLRGDQCDNCSAILDPI 163
>gi|314932712|ref|ZP_07840082.1| methionine--tRNA ligase [Staphylococcus caprae C87]
gi|313654542|gb|EFS18294.1| methionine--tRNA ligase [Staphylococcus caprae C87]
Length = 657
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 21 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 71 -EYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
Y
Sbjct: 130 VPDETYYTE 138
>gi|306840483|ref|ZP_07473242.1| methionyl-tRNA synthetase [Brucella sp. BO2]
gi|306289498|gb|EFM60716.1| methionyl-tRNA synthetase [Brucella sp. BO2]
Length = 515
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|242371680|ref|ZP_04817254.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
gi|242350629|gb|EES42230.1| methionyl-tRNA synthetase [Staphylococcus epidermidis M23864:W1]
Length = 656
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|223044412|ref|ZP_03614445.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
gi|222442201|gb|EEE48313.1| methionyl-tRNA synthetase [Staphylococcus capitis SK14]
Length = 656
Score = 44.3 bits (103), Expect = 0.043, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|325696277|gb|EGD38168.1| methionine--tRNA ligase [Streptococcus sanguinis SK160]
Length = 679
Score = 44.3 bits (103), Expect = 0.044, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|327470507|gb|EGF15963.1| methionine--tRNA ligase [Streptococcus sanguinis SK330]
Length = 665
Score = 44.3 bits (103), Expect = 0.044, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|148560370|ref|YP_001258936.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
gi|148371627|gb|ABQ61606.1| methionyl-tRNA synthetase [Brucella ovis ATCC 25840]
Length = 515
Score = 44.3 bits (103), Expect = 0.044, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYTGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|332362322|gb|EGJ40122.1| methionine--tRNA ligase [Streptococcus sanguinis SK1056]
Length = 679
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWNLLNISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|239637476|ref|ZP_04678450.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
gi|239596921|gb|EEQ79444.1| methionyl-tRNA synthetase [Staphylococcus warneri L37603]
Length = 656
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|229169755|ref|ZP_04297455.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
gi|228613794|gb|EEK70919.1| Methionyl-tRNA synthetase 2 [Bacillus cereus AH621]
Length = 544
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 49/167 (29%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+Q+
Sbjct: 17 HLGHIASLLPGDILARYYRAKG--EHVLYVSGSDCNGT----PITIRAKQDGV------M 64
Query: 96 ISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I K ++F + L T +H ++ + + +
Sbjct: 65 VKEIADKYHEEFERCFRSLGFTYDCYTRTDSEHHHETVQKVFLRLLEEGYIYKKVVEQAY 124
Query: 154 FDTSSIPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + + +L K+
Sbjct: 125 CETCTQFLPDRYVEGICPHCHEAARGDQCDACSAILDPLDLLEKKCK 171
>gi|167038518|ref|YP_001666096.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|320116914|ref|YP_004187073.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
gi|166857352|gb|ABY95760.1| methionyl-tRNA synthetase [Thermoanaerobacter pseudethanolicus ATCC
33223]
gi|319930005|gb|ADV80690.1| methionyl-tRNA synthetase [Thermoanaerobacter brockii subsp. finnii
Ako-1]
Length = 633
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 58/419 (13%), Positives = 115/419 (27%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI AR++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAREKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SKYEGWYCT 128
Query: 135 LIQNIILHGHAY----EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
++ + + S+ + P+ ++ +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRQVERVKEEGYFFRLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 191 FILWKRSTPMEPGWESPWGRGRP-------------------------GWHIECSAMSSH 225
++ + +E + S G+ +
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTDHDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFDGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|256159715|ref|ZP_05457462.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|256254977|ref|ZP_05460513.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
gi|261222163|ref|ZP_05936444.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
gi|265998128|ref|ZP_06110685.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|260920747|gb|EEX87400.1| methionyl-tRNA synthetase [Brucella ceti B1/94]
gi|262552596|gb|EEZ08586.1| methionyl-tRNA synthetase [Brucella ceti M490/95/1]
Length = 515
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 47/132 (35%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWH 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|242399898|ref|YP_002995323.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|259511659|sp|C5ZZZ3|SYR_THESM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|242266292|gb|ACS90974.1| Arginyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 644
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR ++ D + R++R V +N IDD
Sbjct: 141 HMGHARNAVLGDTVARIMRALGYNVEV---QNY--IDD 173
>gi|240102754|ref|YP_002959063.1| arginyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|239910308|gb|ACS33199.1| Arginyl-tRNA synthetase (argS) [Thermococcus gammatolerans EJ3]
Length = 640
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 21/38 (55%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR ++ D + R++R + V +N IDD
Sbjct: 138 HMGHARNAVLGDTMARIMRRLGYKVEV---QNY--IDD 170
>gi|228476230|ref|ZP_04060933.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
gi|228269715|gb|EEK11214.1| methionine--tRNA ligase [Staphylococcus hominis SK119]
Length = 658
Score = 44.3 bits (103), Expect = 0.045, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|324991378|gb|EGC23311.1| methionine--tRNA ligase [Streptococcus sanguinis SK353]
Length = 665
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|315124642|ref|YP_004066646.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
gi|315018364|gb|ADT66457.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
ICDCCJ07001]
Length = 530
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|306843870|ref|ZP_07476465.1| methionyl-tRNA synthetase [Brucella sp. BO1]
gi|306275625|gb|EFM57349.1| methionyl-tRNA synthetase [Brucella sp. BO1]
Length = 515
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 25/138 (18%), Positives = 50/138 (36%), Gaps = 15/138 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFSRRKIDE 172
YG ++
Sbjct: 128 SVRDEAYYGEEETEVRED 145
>gi|86150808|ref|ZP_01069024.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
gi|85841978|gb|EAQ59224.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 260.94]
Length = 530
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|2266985|emb|CAA74281.1| MEtRS [Arabidopsis thaliana]
Length = 616
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 31/188 (16%), Positives = 51/188 (27%), Gaps = 18/188 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + P
Sbjct: 80 VNAPPHMGSAYTTIAADSISRFQRLLG--KKVIF---ITGTDEHGEKIATSAAANGRNPP 134
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ +I+ + KD + H + + +G Y
Sbjct: 135 --EHCDLISQSY-RTLWKDLDI--AYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYE 189
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + V K F L K P+E
Sbjct: 190 GLYCVNCEEYKDEKELLENNCCPVHQMPCVARKEDNYF---FALSKYQKPLEDILAQNPR 246
Query: 210 RGRPGWHI 217
+P + +
Sbjct: 247 FVQPSYRL 254
>gi|314937303|ref|ZP_07844645.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
gi|313654599|gb|EFS18349.1| methionine--tRNA ligase [Staphylococcus hominis subsp. hominis C80]
Length = 659
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 21 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + +L H + + + ++ G Y E +
Sbjct: 71 -EYLDEMIAGIKRLWAKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
Y
Sbjct: 130 VPDETYYTE 138
>gi|295401997|ref|ZP_06811959.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
C56-YS93]
gi|294975999|gb|EFG51615.1| methionyl-tRNA synthetase [Geobacillus thermoglucosidasius
C56-YS93]
Length = 648
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 39/151 (25%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 20 HIGHAYTTVAGDAMARYKRLRGYD-----VMYLTGTDEHGQKIQRKAEEKGVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNEII 153
+ + +L H + + ++ G Y E
Sbjct: 69 QQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|169628221|ref|YP_001701870.1| methionyl-tRNA synthetase [Mycobacterium abscessus ATCC 19977]
gi|169240188|emb|CAM61216.1| Methionyl-tRNA synthetase (MetG) [Mycobacterium abscessus]
Length = 523
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 63/414 (15%), Positives = 105/414 (25%), Gaps = 69/414 (16%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A + D + R R + V Y +T D+ ++ A+ + +
Sbjct: 21 PHIGHAYEYVATDAVARFKRLDGFD--VRY---LTGTDEHGLKVAQ---TAAAAGIPTAQ 72
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ N+ F L +H + + + +G Y +
Sbjct: 73 LARHNSDVFEALQRTLNISFDRFIRTTDPDHYEASKAIWRKMADNGDIYLDTYSGWYSVR 132
Query: 158 SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK---------RSTPMEPGWESP- 207
Y + ++ P + P
Sbjct: 133 DEAYYTDAETTVAPDGTRTATATGTPVDWTEEHSYFFRLSAYQDKLLAHYEAHPEFIGPD 192
Query: 208 -------------------------WGRGRPG-----------------WHIECSAMSSH 225
WG P + S
Sbjct: 193 VRRNEVVSFVSGGLRDLSISRTTFDWGVPVPDNPEHVMYVWVDALTNYLTGVGYPDTDSE 252
Query: 226 YLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
G+ + IH G D+I H A A I ++ H FL +G KMSKS G
Sbjct: 253 LFGRYWPANIHMIGKDIIRFHTVYWPAFLMSA-GIALPQRVFAHG-FLTNKGEKMSKSIG 310
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHYREP---IDFTVQRLTEAEILLSK-WPQ 339
N + L+ T + Y E E L +
Sbjct: 311 NVVDPINLVNTFGLDQVRYFLLREVPFGQDGSYTEEGLIGRINADLANELGNLAQRSLSM 370
Query: 340 TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
+ + G I P D ++A L + AR + + A +LG
Sbjct: 371 VAKNLGGIVPEPGEFAPEDTELLAAADTLLEQARTHFEVPAMHLALEAIWQVLG 424
>gi|159465763|ref|XP_001691092.1| predicted protein [Chlamydomonas reinhardtii]
gi|158279778|gb|EDP05538.1| predicted protein [Chlamydomonas reinhardtii]
Length = 526
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 33/170 (19%), Positives = 56/170 (32%), Gaps = 14/170 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A P I DV R R K V + +T D +KI A + +
Sbjct: 10 VNAAPHMGSAYPTIAADVASRFQRLLG--KRVRF---LTGTDEHGEKIAAAAEKRGMTPQ 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I ++ T + K R T + R + ++ +A +
Sbjct: 65 A--HCDDIVAQYTDLWGKLDIRFDRFVRTTESRHAALVVDVLGRCWE-RGDIYAADYEGW 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
D + ++ R P ++ K+ F L K S +E
Sbjct: 122 YCVDCEEFKDEKEMAQ---PRGCPTHRKPCQHRKEANYFFRLSKYSKEIE 168
>gi|13605910|gb|AAK32940.1|AF367354_1 AT3g55400/T22E16_60 [Arabidopsis thaliana]
gi|22137164|gb|AAM91427.1| AT3g55400/T22E16_60 [Arabidopsis thaliana]
Length = 616
Score = 44.3 bits (103), Expect = 0.046, Method: Composition-based stats.
Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 14/186 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + P
Sbjct: 80 VNAPPHMGSAYTTIAADSIARFQRLLG--KKVIF---ITGTDEHGEKIATSAAANGRNPP 134
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ +I+ + KD + H + + +G Y A+ E
Sbjct: 135 --EHCDLISQSY-RTLWKDLDI--AYDKFIRTTDPKHEAIVKEFYARVFANGDIYRADYE 189
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
++ + + ++P K++ F L K P+E
Sbjct: 190 GLYCVNCEEYKDEK-GLLENNCCPVHQMPCVARKEDNYFFALSKYQKPLEDILAQNPRFV 248
Query: 212 RPGWHI 217
+P + +
Sbjct: 249 QPSYRL 254
>gi|305431795|ref|ZP_07400962.1| arginine--tRNA ligase [Campylobacter coli JV20]
gi|304444879|gb|EFM37525.1| arginine--tRNA ligase [Campylobacter coli JV20]
Length = 530
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFNTEYYVN 151
>gi|254704289|ref|ZP_05166117.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261754957|ref|ZP_05998666.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261744710|gb|EEY32636.1| methionyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
Length = 515
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|161618949|ref|YP_001592836.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|260566464|ref|ZP_05836934.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
gi|161335760|gb|ABX62065.1| methionyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|260155982|gb|EEW91062.1| methionyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
Length = 515
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNNSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|312109184|ref|YP_003987500.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
gi|311214285|gb|ADP72889.1| methionyl-tRNA synthetase [Geobacillus sp. Y4.1MC1]
Length = 648
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 39/151 (25%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 20 HIGHAYTTVAGDAMARYKRLRGYD-----VMYLTGTDEHGQKIQRKAEEKGVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNEII 153
+ + +L H + + ++ G Y E
Sbjct: 69 QQYVDEIVAGIQELWKKLDISYDDFIRTTQDRHKKVVEKIFARLVEQGDIYLGEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 129 TPCESFYTERQLVDGNCPDCGRPVEKVKEES 159
>gi|14520895|ref|NP_126370.1| arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
gi|13878801|sp|Q9V0V2|SYR_PYRAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|5458112|emb|CAB49601.1| argS arginyl-tRNA synthetase [Pyrococcus abyssi GE5]
Length = 625
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR I+ D + R+LR+ E V +N IDD
Sbjct: 135 HMGHARNAILGDSMARILRFLGYEVEV---QNY--IDD 167
>gi|17987270|ref|NP_539904.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|17982947|gb|AAL52168.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
Length = 544
Score = 44.3 bits (103), Expect = 0.047, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 48 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 96
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 97 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWY 156
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 157 SVRDEAYYGEEE 168
>gi|304314728|ref|YP_003849875.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
Marburg]
gi|302588187|gb|ADL58562.1| methionyl-tRNA synthetase [Methanothermobacter marburgensis str.
Marburg]
Length = 652
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 46/167 (27%), Gaps = 19/167 (11%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQ 85
Y GPT H+G+ R I D+ R R V +V TD + I +A
Sbjct: 12 YANGPT-----HLGHLRSTYIPADIYARYRRLRG--DDVLFVCA-TD-EHGTPIAVKAES 62
Query: 86 EHPSIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E + ++ + +D + H + G+
Sbjct: 63 EGLK------PIEVATRYNEMIKRDLEECDISFDSFTRTTDDLHYEIAQNFFLKLYEKGY 116
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
YE + + ++ S I G + +
Sbjct: 117 IYEKDIKQLYCNSCQRFLPDRYVEGICPHCGGEGARGDHCESCGRHL 163
>gi|217034348|ref|ZP_03439764.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
gi|216943233|gb|EEC22700.1| hypothetical protein HP9810_491g41 [Helicobacter pylori 98-10]
Length = 645
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRE 153
>gi|327474600|gb|EGF20005.1| methionine--tRNA ligase [Streptococcus sanguinis SK408]
Length = 666
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 59/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQAKAEESGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|254719073|ref|ZP_05180884.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
gi|265984063|ref|ZP_06096798.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
gi|306838355|ref|ZP_07471200.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
gi|264662655|gb|EEZ32916.1| methionyl-tRNA synthetase [Brucella sp. 83/13]
gi|306406495|gb|EFM62729.1| methionyl-tRNA synthetase [Brucella sp. NF 2653]
Length = 515
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|222824086|ref|YP_002575660.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
gi|254782949|sp|B9KCX0|SYR_CAMLR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|222539308|gb|ACM64409.1| arginyl-tRNA synthetase [Campylobacter lari RM2100]
Length = 531
Score = 43.9 bits (102), Expect = 0.048, Method: Composition-based stats.
Identities = 52/369 (14%), Positives = 103/369 (27%), Gaps = 28/369 (7%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQE 86
PT HIG+AR I D L R+ R+ + Y N D ++I I A +E
Sbjct: 115 PT--GPLHIGHARGAIFGDTLTRVARHLGYKFDTEYYVN--DAGNQIYLLGLSILLAVKE 170
Query: 87 HPSIPINDAISIITS-KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
H + K+ + + II A
Sbjct: 171 HCLKEQVQYPDEYYKGEYIIDVAKEAFAEFEKDFFVEENIPQLALWAKDKMLKIIKQNLA 230
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +I D +++ + ++++ ++ +
Sbjct: 231 ---DAKIFIDAYVSETSYY---SELENTLKALKEHGGTYEQDGKIWLASSVKGDEKDRVI 284
Query: 206 SPWGRGRPGWHIECSAMSSHYL-GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK--TA 262
+ G I+ G D + A +
Sbjct: 285 IKDDGKGTYLAADIVYHKDKMSRGYDKCINIWGADHHGYIARMKAAMEFLGHDSQNLEII 344
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
+ + N E KMSK GNFI + ++LE V+R + ++F
Sbjct: 345 LAQMVSLLKNGEPYKMSKRAGNFILMGDVLEELGS-------DVLRYIFISKKCDTHLEF 397
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHK-LARESTKNHDL 381
V + + + I + D + ++L++ ++ +L
Sbjct: 398 DVDEFKKEDSSNPVYYINYAHARIHQVFAKAGKSVDDVMYAKFESLNEDGMNLLFESLNL 457
Query: 382 LPIFNASAH 390
+ N +
Sbjct: 458 KAVLNDAFE 466
>gi|330686067|gb|EGG97689.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU121]
Length = 656
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKSLWDKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|256369417|ref|YP_003106925.1| methionine--tRNA ligase [Brucella microti CCM 4915]
gi|255999577|gb|ACU47976.1| methionine--tRNA ligase [Brucella microti CCM 4915]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|254693711|ref|ZP_05155539.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|261213983|ref|ZP_05928264.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|260915590|gb|EEX82451.1| methionyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|225852500|ref|YP_002732733.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|256113542|ref|ZP_05454368.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|256264009|ref|ZP_05466541.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|265994915|ref|ZP_06107472.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|225640865|gb|ACO00779.1| methionyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|262766028|gb|EEZ11817.1| methionyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|263094153|gb|EEZ18075.1| methionyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|326409016|gb|ADZ66081.1| methionyl-tRNA synthetase [Brucella melitensis M28]
gi|326538726|gb|ADZ86941.1| methionyl-tRNA synthetase [Brucella melitensis M5-90]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|154499613|ref|ZP_02037651.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
29799]
gi|150271691|gb|EDM98935.1| hypothetical protein BACCAP_03269 [Bacteroides capillosus ATCC
29799]
Length = 656
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 15/56 (26%), Positives = 25/56 (44%), Gaps = 8/56 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
D HIG+A + DV+ R R + V +T D+ KI ++A+ +
Sbjct: 18 DKLHIGHAYCTVATDVMARYKRLTGYD-----VMFLTGTDEHGQKIEDKAKDAGVT 68
>gi|256044655|ref|ZP_05447559.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|260564001|ref|ZP_05834487.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|265991079|ref|ZP_06103636.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|25009373|sp|Q8YH17|SYM_BRUME RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|260154017|gb|EEW89109.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|263001863|gb|EEZ14438.1| methionyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQVIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|23501876|ref|NP_698003.1| methionyl-tRNA synthetase [Brucella suis 1330]
gi|225627473|ref|ZP_03785510.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|254701747|ref|ZP_05163575.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|254706809|ref|ZP_05168637.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|254710081|ref|ZP_05171892.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|254714082|ref|ZP_05175893.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|254716862|ref|ZP_05178673.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|256031577|ref|ZP_05445191.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|260168708|ref|ZP_05755519.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
gi|261218663|ref|ZP_05932944.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261314276|ref|ZP_05953473.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261317630|ref|ZP_05956827.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261321839|ref|ZP_05961036.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261752300|ref|ZP_05996009.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261758184|ref|ZP_06001893.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
gi|265988665|ref|ZP_06101222.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|25009345|sp|P59078|SYM_BRUSU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|23347815|gb|AAN29918.1| methionyl-tRNA synthetase [Brucella suis 1330]
gi|225617478|gb|EEH14523.1| methionyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|260923752|gb|EEX90320.1| methionyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261294529|gb|EEX98025.1| methionyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261296853|gb|EEY00350.1| methionyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261303302|gb|EEY06799.1| methionyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261738168|gb|EEY26164.1| methionyl-tRNA synthetase [Brucella sp. F5/99]
gi|261742053|gb|EEY29979.1| methionyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|264660862|gb|EEZ31123.1| methionyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|163843264|ref|YP_001627668.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
gi|163673987|gb|ABY38098.1| methionyl-tRNA synthetase [Brucella suis ATCC 23445]
Length = 515
Score = 43.9 bits (102), Expect = 0.049, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|326482096|gb|EGE06106.1| methionine-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 592
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-GEKCVTYVRNITDIDD---KIIERARQEHPSI 90
V HIG+ +++ D+L R G+ + +T D+ KI + A Q
Sbjct: 64 VNAAPHIGHLYTILIADILKRWQVLLGNGDAKL-----LTGTDEHGMKIQQAALQNGLE- 117
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN 149
+ +N + F + H + + +N+ G+ YE
Sbjct: 118 -----PQALCDRNCETFKLLAREANASYDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGK 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQ 173
+E + S Y + + +
Sbjct: 173 HEGWYSVSDETFYPASAVHSTLDP 196
>gi|284931170|gb|ADC31108.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. F]
Length = 597
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 14/171 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-IDDKIIERARQEHPSIPINDAIS 97
HIG+A I+ D L R + + V ++ TD KI +A+ +N
Sbjct: 30 PHIGHAYTTILGDFLARFKKQRGYD--VFFLSG-TDEFGKKIETKAK------SLNLTPQ 80
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA--NNEIIF 154
+ + + +F + L H + + L + Y
Sbjct: 81 KMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIYLDQWQGLYCV 140
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D S ++ +K + + K S+ EP +
Sbjct: 141 DCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVG-HKISSINEPSYF 190
>gi|316934061|ref|YP_004109043.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
gi|315601775|gb|ADU44310.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris DX-1]
Length = 514
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R + V + +T D+ K+I+ A++E +
Sbjct: 18 GAPHIGHAYEAIATDALARFQRLDG--RDVFF---LTGTDEHGLKMIQTAQREGMT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + ++N +F R + H + + + + G Y +
Sbjct: 69 --PAELAARNAGRFRDMDDRFGISYDRFIRTSEEQHHASVQEVWKRMQASGDIYLDSYSG 126
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 127 WYSVRDEAYYAEDE 140
>gi|312115063|ref|YP_004012659.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
gi|311220192|gb|ADP71560.1| methionyl-tRNA synthetase [Rhodomicrobium vannielii ATCC 17100]
Length = 523
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 57/182 (31%), Gaps = 17/182 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A + D + R R V + +T +D+ K+ + A +E +
Sbjct: 22 PHIGHAYEAVATDAMARFKRLDG--HPVFF---LTGVDEHGLKMKQTAAKEGIT------ 70
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNEI 152
+ + +NT +F++ +L H + + + + G Y
Sbjct: 71 PTELADRNTAKFIEMLEQLDVSYDDFIRTTEPRHHESVAEIWRRMEKAGDIYLAGYKGWY 130
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + P ++ ++ F L K + +E G
Sbjct: 131 SVRDEAFYAESETVLGGNGIRLGPQGTPVEWTEEQTYFFRLSKYEKKLLKFYEENPGFIM 190
Query: 213 PG 214
P
Sbjct: 191 PA 192
>gi|15645045|ref|NP_207215.1| methionyl-tRNA synthetase [Helicobacter pylori 26695]
gi|2501030|sp|P56127|SYM_HELPY RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|2313521|gb|AAD07483.1| methionyl-tRNA synthetase (metS) [Helicobacter pylori 26695]
Length = 650
Score = 43.9 bits (102), Expect = 0.050, Method: Composition-based stats.
Identities = 58/442 (13%), Positives = 108/442 (24%), Gaps = 70/442 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLND 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFECARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GN + ++ + + + L + +
Sbjct: 306 LGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNLLNRLL 365
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE 395
L + ++ +H++ + H L L
Sbjct: 366 GMAKKYFNHSLKSTKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVYDFLNKL 425
Query: 396 VCKEHL----NKNISIAIEKLV 413
+ KE N S +E L+
Sbjct: 426 IAKEEPWVLHKNNESEKLEALL 447
>gi|294852413|ref|ZP_06793086.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
gi|294821002|gb|EFG38001.1| methionyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
Length = 544
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 48 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 96
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 97 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 156
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 157 SVRDEAYYGEEE 168
>gi|283956573|ref|ZP_06374052.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
gi|283791822|gb|EFC30612.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 1336]
Length = 530
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|124802884|ref|XP_001347624.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
gi|23495207|gb|AAN35537.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
Length = 889
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 55/183 (30%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +++ D + R + + T T D+ KI +A +
Sbjct: 234 VNGDPHIGHAYEIVLADAIARYHKIIGRDTFFT-----TGADEHGLKIANQAAKN----- 283
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANN 150
N + KN +F L + + H + +G Y
Sbjct: 284 -NMTPKELCDKNVLKFQNLNKLLYVEDDYYVRTTRDSHKKIAQEVWDKCEKNGDIYLGEY 342
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E ++ + ++ + + K+ F + K + +S
Sbjct: 343 EGWYNVREETYVPENEAKLMNYIDPLNNIKLEKMKEPSYFFKMSKYQDKLIEYIQSNPDY 402
Query: 211 GRP 213
+P
Sbjct: 403 IQP 405
>gi|31544361|ref|NP_852939.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
gi|31541205|gb|AAP56507.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(low)]
gi|284930403|gb|ADC30342.1| methionyl-tRNA synthetase [Mycoplasma gallisepticum str. R(high)]
Length = 590
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 27/171 (15%), Positives = 51/171 (29%), Gaps = 14/171 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-IDDKIIERARQEHPSIPINDAIS 97
HIG+A I+ D L R + + V ++ TD KI +A+ +N
Sbjct: 30 PHIGHAYTTILGDFLARFKKQRGYD--VFFLSG-TDEFGKKIETKAK------SLNLTPQ 80
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA--NNEIIF 154
+ + + +F + L H + + L + Y
Sbjct: 81 KMVDQYSSKFKELFDLLNIELTRFVRTTEPKHQEVVKKIFGLFYLKKYIYLDQWQGLYCV 140
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D S ++ +K + + K S+ EP +
Sbjct: 141 DCEENYTTSSVLKKADLVEKTNLDLSMDPDDQLYCHVG-HKISSINEPSYF 190
>gi|86153085|ref|ZP_01071290.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
gi|85843970|gb|EAQ61180.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni
HB93-13]
Length = 530
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|67921186|ref|ZP_00514705.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
gi|67857303|gb|EAM52543.1| Methionyl-tRNA synthetase, class Ia [Crocosphaera watsonii WH 8501]
Length = 535
Score = 43.9 bits (102), Expect = 0.051, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 57/170 (33%), Gaps = 13/170 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I+ DV+ R R E + IT D+ KI A ++ +
Sbjct: 20 VNGVPHIGSAYTTIIADVIARHKRLIGDEVLL-----ITGTDEHGQKIQRTAEEKGLAPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I S + + K + + A+ H + + + +G Y A +
Sbjct: 75 --KHCDEIVSSFEELWQKLEIQY---DRFSRTTASKHEVIVKEFFERVWENGDIYLAQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + + T ++ + F L K T +E
Sbjct: 130 GWYCVACEEFKEKRELLEDGCCPIHTNKKAEWRDEENYFFKLSKYQTKLE 179
>gi|256061087|ref|ZP_05451242.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261325089|ref|ZP_05964286.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261301069|gb|EEY04566.1| methionyl-tRNA synthetase [Brucella neotomae 5K33]
Length = 515
Score = 43.9 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRELADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|209885248|ref|YP_002289105.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
gi|209873444|gb|ACI93240.1| methionyl-tRNA synthetase [Oligotropha carboxidovorans OM5]
Length = 523
Score = 43.9 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 47/134 (35%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R + V + +T D+ K+I+ A++E +
Sbjct: 23 GAPHIGHAYEAIATDALARFQRLDGMD--VFF---LTGTDEHGLKMIQTAQKEGMT---- 73
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + ++N +F RL + H + + + +G Y ++
Sbjct: 74 --PAELATRNAARFKDMDRRLNISFDRFIRTSEVAHHDSTQEIWRRMAANGDIYLSSYAG 131
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 132 WYSVRDEAYYAEDE 145
>gi|148994771|ref|ZP_01823842.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|149013148|ref|ZP_01833965.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|168488899|ref|ZP_02713098.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|182684197|ref|YP_001835944.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
CGSP14]
gi|225858843|ref|YP_002740353.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|237650047|ref|ZP_04524299.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
gi|237821801|ref|ZP_04597646.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
gi|303256108|ref|ZP_07342128.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|303263003|ref|ZP_07348936.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
SP14-BS292]
gi|303264851|ref|ZP_07350767.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS397]
gi|303266930|ref|ZP_07352807.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS457]
gi|303269096|ref|ZP_07354876.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS458]
gi|238691163|sp|B2IQ55|SYM_STRPS RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|254782873|sp|C1C727|SYM_STRP7 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|31087940|gb|AAO25636.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae]
gi|147762999|gb|EDK69943.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|147927037|gb|EDK78079.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|182629531|gb|ACB90479.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
CGSP14]
gi|183572547|gb|EDT93075.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|225721595|gb|ACO17449.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|301802052|emb|CBW34784.1| Drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
INV200]
gi|302596955|gb|EFL64081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|302635830|gb|EFL66332.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
SP14-BS292]
gi|302641345|gb|EFL71712.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS458]
gi|302643563|gb|EFL73833.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS457]
gi|302645539|gb|EFL75770.1| drug-resistant methionyl-tRNA synthetase [Streptococcus pneumoniae
BS397]
gi|332073411|gb|EGI83890.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
Length = 545
Score = 43.9 bits (102), Expect = 0.052, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 20/160 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
HIG+A ++ D+L R R E V YV N T I RA++E N +
Sbjct: 17 HIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGT----PISIRAKKE------NKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I ++F + +L R +H +Q + ++
Sbjct: 65 VKEIADFYHKEFKETFEKLGF-TYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQL 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ F K +R + + D I
Sbjct: 124 YCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPI 163
>gi|126656215|ref|ZP_01727599.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126622495|gb|EAZ93201.1| methionyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 535
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 31/170 (18%), Positives = 54/170 (31%), Gaps = 13/170 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A I+ DV+ R R E + IT D+ KI A+++
Sbjct: 20 VNGVPHIGSAYTTIIADVIARYKRLIGEEVLL-----ITGTDEHGQKIQRTAQEKGL--L 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
D I Q + K + + AT H + + +G Y A +
Sbjct: 73 PQDHCDQIVGSFKQLWQKLDIQY---DRFSRTTATKHEAIVKEFFGRVWENGDIYLAQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + ++ + F L K + +E
Sbjct: 130 GWYCVQCEEFKEKRELLEDGCCPLHPNKKAEWRDEENYFFKLSKYQSKLE 179
>gi|126696331|ref|YP_001091217.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|126543374|gb|ABO17616.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 514
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 24/178 (13%), Positives = 50/178 (28%), Gaps = 14/178 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I+ D + R R + V + IT +D+ KI A ++
Sbjct: 12 VNDKPHLGSVYTTIICDSIARYKRLAGED--VIF---ITGVDEHGLKIQRTANEKGIEPK 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I+ + + + NH + + + Y +
Sbjct: 67 --SHCDEISEVFNNNW---KDWNISFDKFIRTSSKNHEFVVNEFYERVKASDDIYMGVQK 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + ++ + F L K +E P
Sbjct: 122 GWYCVGCEEFKDNPENSS-TYKCPIHQKNLEWKNEENLFFRLSKYQKEIERIINEPSF 178
>gi|315930154|gb|EFV09278.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
Length = 548
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|121613183|ref|YP_001000850.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
gi|166232774|sp|A1W0F9|SYR_CAMJJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|87249269|gb|EAQ72230.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81-176]
Length = 530
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|86150379|ref|ZP_01068605.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|85839204|gb|EAQ56467.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni CF93-6]
gi|284926399|gb|ADC28751.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni IA3902]
Length = 530
Score = 43.9 bits (102), Expect = 0.053, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|325848878|ref|ZP_08170388.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
gi|325480522|gb|EGC83584.1| methionine--tRNA ligase [Anaerococcus hydrogenalis ACS-025-V-Sch4]
Length = 645
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 13/233 (5%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI-PINDA 95
HIGN ++ DVL R + +T T D+ KI+ A P D
Sbjct: 20 HIGNVYTSVIADVLKRYKTLQGFDSYLT-----TGTDEHGQKIMNAALSHGSKPQPFVDK 74
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI--I 153
I+ T ++ D +I Q +Y +I +
Sbjct: 75 IAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKGEYDGYYCESCESY 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-EPGW-ESPWGRG 211
F S + + + K K L+K EP + ++
Sbjct: 135 FTESQLDEGNCPDCGRAVDHHKEESYFFKLSKYTDKLKELFKDHPEFLEPKFRQNEMLNN 194
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+E ++S + D+ +++ +
Sbjct: 195 FINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTAIGYGHDMEKF 247
>gi|21227450|ref|NP_633372.1| arginyl-tRNA synthetase [Methanosarcina mazei Go1]
gi|23822188|sp|Q8PX74|SYR_METMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|20905820|gb|AAM31044.1| Arginyl-tRNA synthetase [Methanosarcina mazei Go1]
Length = 569
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+LR + V Y N
Sbjct: 130 HVGHIRNSIIGDTLARILRRAGYDVEVQYYVN 161
>gi|88596555|ref|ZP_01099792.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
gi|88191396|gb|EAQ95368.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 84-25]
Length = 530
Score = 43.9 bits (102), Expect = 0.054, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|157415439|ref|YP_001482695.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|172047154|sp|A8FMN1|SYR_CAMJ8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|157386403|gb|ABV52718.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 81116]
gi|307748081|gb|ADN91351.1| Arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni M1]
gi|315932319|gb|EFV11262.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 327]
Length = 530
Score = 43.9 bits (102), Expect = 0.055, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGDTLTRLARHLGYKFDTEYYVN 151
>gi|78779318|ref|YP_397430.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|78712817|gb|ABB49994.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 511
Score = 43.9 bits (102), Expect = 0.055, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 46/183 (25%), Gaps = 19/183 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I+ D + R R + V + IT +D+ KI A ++
Sbjct: 12 VNDKPHLGSVYTTIICDSIARYKRLVGED--VIF---ITGVDEHGLKIQRTANEKGIE-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ ++ F + ++ NH + + + Y
Sbjct: 65 ----PKSHCDEISEVFNINWKNWNISFDKFIRTSSKNHEFVVNEFYERVKSSDDIYMGVQ 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP--MEPGWES 206
+ S + K EP +
Sbjct: 121 KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIE 180
Query: 207 PWG 209
P
Sbjct: 181 PIE 183
>gi|302876074|ref|YP_003844707.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|307686795|ref|ZP_07629241.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|302578931|gb|ADL52943.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
Length = 538
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 49/168 (29%), Gaps = 19/168 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ ++ DVL R Y V YV D I RA++E S
Sbjct: 17 HIGHIAALLPGDVLARY--YRGKGDNVLYVSG----SDCHGTPISIRAKKEGVS------ 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEII 153
I K +F K +L + R + H ++ I + G YE E I
Sbjct: 65 PKDIADKYHGEFKKCFEKLNFS-YDYYGRTDDEFHKKEVQEAILLLYNKGLIYEKEVEQI 123
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + ++ L +
Sbjct: 124 YCEHCNQFLPDRYVEGVCPKCHSIARGDQCDNCGSLLEPLELSERKCK 171
>gi|157363213|ref|YP_001469980.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
gi|157313817|gb|ABV32916.1| methionyl-tRNA synthetase [Thermotoga lettingae TMO]
Length = 624
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 21/162 (12%), Positives = 47/162 (29%), Gaps = 15/162 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I+ D++ R R + V + +T D+ KI++ +
Sbjct: 12 VNSDPHVGSAYTTIIADIIARYKRMMGYD--VFF---LTGTDEHGQKILQASSSLGKDPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ + Q + K + NH+ + Y ++ ++ + Y+
Sbjct: 67 SF--CDELADRFKQLWKKLN---ITNDGFIRTTDPNHMKVVQYFVKKMVENNDIYKGEYR 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ N K+
Sbjct: 122 GWYCVPCETYWNEDEIGSDKLCPSCGRELKYVSEQNYFFRLS 163
>gi|212696056|ref|ZP_03304184.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
7454]
gi|212676965|gb|EEB36572.1| hypothetical protein ANHYDRO_00592 [Anaerococcus hydrogenalis DSM
7454]
Length = 645
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 34/233 (14%), Positives = 63/233 (27%), Gaps = 13/233 (5%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI-PINDA 95
HIGN ++ DVL R + +T T D+ KI+ A P D
Sbjct: 20 HIGNVYTSVIADVLKRYKTLQGFDSYLT-----TGTDEHGQKIMNAALSHGSKPQPFVDK 74
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI--I 153
I+ T ++ D +I Q +Y +I +
Sbjct: 75 IAAETQDLLKKLDIDYDCFIRSTDPKHEENVKNIFQYLYDKGDIYKGEYDGYYCESCESY 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-EPGW-ESPWGRG 211
F S + + + K K L+K EP + ++
Sbjct: 135 FTESQLDEGNCPDCGRAVDHHKEESYFFKLSKYTDKLKELFKDHPEFLEPKFRQNEMLNN 194
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+E ++S + D+ +++ +
Sbjct: 195 FINKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTAIGYGHDMEKF 247
>gi|108563402|ref|YP_627718.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
gi|107837175|gb|ABF85044.1| methionyl-tRNA synthetase [Helicobacter pylori HPAG1]
Length = 643
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 29/172 (16%), Positives = 53/172 (30%), Gaps = 16/172 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ S +Y + S+ K+ + + +K ST +P
Sbjct: 122 SGYYCVS-CESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSTYEKP 172
>gi|158321682|ref|YP_001514189.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
gi|158141881|gb|ABW20193.1| methionyl-tRNA synthetase [Alkaliphilus oremlandii OhILAs]
Length = 654
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 44/314 (14%), Positives = 88/314 (28%), Gaps = 60/314 (19%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS--IPIND 94
HIG+ + DVL R R+ + V+ +T D +KI E A + S ++
Sbjct: 20 HIGHTYTTVAADVLARFKRFTGYD-----VQFLTGTDEHGEKIQEAAEKAGVSPKEYLDK 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT---------------NHIPQMIYLIQNI 139
+ I + + + H+ R + ++
Sbjct: 75 IVEEIKDLWKKMDISYDIFIRTTDQEHEERVQKIFQTLYDKGDIYKSEYEGWYCTPCESF 134
Query: 140 ILHGHAYEANNEIIFDT----------SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ D + + R + + + +KN
Sbjct: 135 WTE--TQLKEGHVCPDCNRPAHLAKEEAYFFKLSKYQDRLLQYFEEHPEICYPESRKNEM 192
Query: 190 DFILWK--------RSTPMEPGWESPWGR---GRPGWHIECSAMSSHYLGK--------- 229
K T + G + P+ + C+ +++ G
Sbjct: 193 VNNFLKPGLEDLCVSRTTFDWGIKVPFDPKHIIYVWFDAVCNYITALGYGSDNEETFNKY 252
Query: 230 -VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D+H G +++ H A + +G++ KMSKS GN +
Sbjct: 253 WPADVHLVGKEIVRFHTIIWPAILMAL--EIPLPKMVYGHGWILFGADKMSKSKGNIVYP 310
Query: 289 NELLETKKFGGRSW 302
L+E +
Sbjct: 311 EPLIERYGLDAIKY 324
>gi|73668541|ref|YP_304556.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
gi|109895000|sp|Q46DR6|SYR_METBF RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|72395703|gb|AAZ69976.1| arginyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
Length = 569
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+LR + V Y N
Sbjct: 130 HVGHIRNSIIGDTLARILRRAGYDVEVQYYVN 161
>gi|54026880|ref|YP_121122.1| methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
gi|54018388|dbj|BAD59758.1| putative methionyl-tRNA synthetase [Nocardia farcinica IFM 10152]
Length = 518
Score = 43.9 bits (102), Expect = 0.056, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 49/157 (31%), Gaps = 15/157 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R + V + +T D+ K+ + A E
Sbjct: 19 GAPHIGHAYEYISADAIARFKRLDGYD--VFF---MTGTDEHGQKMQQAAAAEGI----- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + ++N+ F + L +H + + + ++ +G Y N
Sbjct: 69 -PVQDLAARNSDVFERLDKALDVSYDRFIRTTDADHRAASVAIWERMLANGDIYLDNYAG 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ Y +++ + +
Sbjct: 128 WYSVRDEAFYTEEETTLLEDGSRISTETKTPVTWTEE 164
>gi|325294665|ref|YP_004281179.1| methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
gi|325065113|gb|ADY73120.1| Methionyl-tRNA synthetase [Desulfurobacterium thermolithotrophum
DSM 11699]
Length = 525
Score = 43.9 bits (102), Expect = 0.057, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 43/160 (26%), Gaps = 11/160 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A D++ R R+ + V + +T D+ KI + A + +
Sbjct: 13 VNDIPHLGHAYTTTAADIVARFNRFLG--RDVFF---LTGTDEHGQKIQQAAEKRGMTPK 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + K + + K T P + + + E
Sbjct: 68 --EFVDTLVPKFKELWEKLNISYDHFIRTTDPEHIKAVQYIFKKCYENGDI-YLGEYEGW 124
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ K V K
Sbjct: 125 YCIPCETYHTEKELLEGKYCPMCKREVVRVKEESYFFRLS 164
>gi|300309930|ref|YP_003774022.1| leucyl-tRNA synthetase [Herbaspirillum seropedicae SmR1]
gi|300072715|gb|ADJ62114.1| leucyl-tRNA synthetase protein [Herbaspirillum seropedicae SmR1]
Length = 882
Score = 43.9 bits (102), Expect = 0.057, Method: Composition-based stats.
Identities = 27/199 (13%), Positives = 53/199 (26%), Gaps = 18/199 (9%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+YR LR V D
Sbjct: 40 KFYACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMP 91
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ + T N + + + ++ ++
Sbjct: 92 AENAAMANGVPPAQWTYSNIDYMKSQMQSMGLAIDWSREMTACRPEYYKWNQWMFLKMLE 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKR 196
G Y+ + +D + + G + ++ A L +
Sbjct: 152 KGIIYKKTGTVNWDPIDQTVLANEQVIDGRGWRSGAVIEKREIPMYYAKITDYADELLEH 211
Query: 197 STPMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 212 VETKLPGWPERVRLMQANW 230
>gi|237747343|ref|ZP_04577823.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
gi|229378694|gb|EEO28785.1| leucyl-tRNA synthetase [Oxalobacter formigenes HOxBLS]
Length = 879
Score = 43.9 bits (102), Expect = 0.057, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 53/199 (26%), Gaps = 18/199 (9%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+YR LR V D
Sbjct: 37 KFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMP 88
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ + T N + + + ++ ++
Sbjct: 89 AENAAMAHGIPPAEWTYSNIAHMKSQMASMGLAIDWTREMTACKPEYYKWNQWMFLKMLE 148
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKR 196
G Y+ + +D + + G + ++ A L
Sbjct: 149 KGIIYQKTGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPMYYARITDYAEELLDY 208
Query: 197 STPMEPGWESPWGRGRPGW 215
T PGW + W
Sbjct: 209 VTHKLPGWPERVRTMQINW 227
>gi|218885863|ref|YP_002435184.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
gi|218756817|gb|ACL07716.1| methionyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki
F']
Length = 657
Score = 43.9 bits (102), Expect = 0.057, Method: Composition-based stats.
Identities = 24/156 (15%), Positives = 42/156 (26%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D L R R + +T D DKI++ A + S
Sbjct: 13 VNAKPHLGHAYTTIVADSLRRFHRLLGKDTYF-----LTGTDEHGDKIVQAAEKAGCS-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+ QF L H + ++Q + G Y
Sbjct: 66 ----PQEFVDGVSTQFRDLWPHLGVEYDQFIRTTDAEHKKCVQDVLQKVYDSGDIYFGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + ++ + +
Sbjct: 122 GGHYCYGCERFYTEKELENGLCPQHQVKPEYISEKN 157
>gi|312795361|ref|YP_004028283.1| methionyl-tRNA synthetase [Burkholderia rhizoxinica HKI 454]
gi|312167136|emb|CBW74139.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Burkholderia rhizoxinica
HKI 454]
Length = 728
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 19/90 (21%), Positives = 31/90 (34%), Gaps = 16/90 (17%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
HIG+ I D+ R +R + E V YV DD I+ RA+ E +
Sbjct: 48 GPIHIGHLVEYIQTDIWVRAMRMHGHE--VYYV----GADDTHGTPIMLRAQSEGIT--- 98
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ + Q+ +D +
Sbjct: 99 ---PRQLIERVWQEHKRDFDHFGISFDNYY 125
>gi|300711986|ref|YP_003737800.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
gi|299125669|gb|ADJ16008.1| methionyl-tRNA synthetase [Halalkalicoccus jeotgali B3]
Length = 692
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
CG Y HIG+ R + D L R LR
Sbjct: 15 TCGL-PYANGDLHIGHLRTYVSGDTLARSLRRLG 47
>gi|317126779|ref|YP_004093061.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
gi|315471727|gb|ADU28330.1| methionyl-tRNA synthetase [Bacillus cellulosilyticus DSM 2522]
Length = 656
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 49/420 (11%), Positives = 97/420 (23%), Gaps = 86/420 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS---- 89
D HIG+A + D + R R + V +T D+ KI +A + S
Sbjct: 19 DKLHIGHAYTTVAGDAMARYKRLRGYD-----VMFLTGTDEHGQKIERKAEDKGVSPQQF 73
Query: 90 -----------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+ + K Q ++
Sbjct: 74 VDDIVKTIKSLWSKLDISYDDFIRTTEERHKKVVQKIFDQLLQQGDIYLDQYEGLYCTPC 133
Query: 127 NHIPQMIY------------------LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+ +A + + + S
Sbjct: 134 ESFFTDYQAKDGKCPDCSRPVEKVQEESYFFRMSKYA-DRLLKYYEENPDFIQPESRKNE 192
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP-GWESPWGRGRP--GWHIECSAMSSH 225
I+ + + I K + W G+ + +
Sbjct: 193 MINNFIKPGLEDLAVSRTSFDWGINVKSNPEHVVYVWIDALSNYITALGYGSDDETLYKK 252
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H D +G+L ++ KMSKS GN
Sbjct: 253 YW--PADVHLVGKEIVRFHTIYWPIMLMALD--LPLPKKVFGHGWLLMKDGKMSKSKGNV 308
Query: 286 ITINELLETKKFGGRSWP-------APVIRLAMLMTHYREPID----------------- 321
+ L+E + R D
Sbjct: 309 VDPVPLIERYGLDALRYYLLREVPFGSDGTFTPEGFVDRVNYDLANDLGNLLNRTVAMIN 368
Query: 322 -FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ + + + + ++ + D+ A+ A+ +L + K D
Sbjct: 369 KYFDGEMPKYIKNATSYDESLVDHVNATVKKVEDAMEDMEFSVALTAIWQLVSRTNKYID 428
>gi|105893564|gb|ABF76729.1| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
Length = 800
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 115 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 163
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 164 -PKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIEQA 222
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 223 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 269
>gi|92117538|ref|YP_577267.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
gi|91800432|gb|ABE62807.1| methionyl-tRNA synthetase [Nitrobacter hamburgensis X14]
Length = 659
Score = 43.9 bits (102), Expect = 0.058, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 35 VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
VY HIG+A I DVL R R K V + +T D+ K+++ A++E
Sbjct: 157 VYPNGAPHIGHAYEAIATDVLARFQRLDG--KDVFF---LTGTDEHGQKMVQTAQKE--- 208
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA 148
N + + ++N + K L + H + + + + +G Y +
Sbjct: 209 ---NISALELATRNAELLRKLDETLNISFNRFIRTSEPAHHHSVQEIWKRMAANGDIYLS 265
Query: 149 NNEIIFDTSSIPNYGSFS 166
+ + Y
Sbjct: 266 SYAGWYSVRDEAYYAEDE 283
>gi|121608058|ref|YP_995865.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
gi|166231650|sp|A1WGU0|SYL_VEREI RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|121552698|gb|ABM56847.1| leucyl-tRNA synthetase [Verminephrobacter eiseniae EF01-2]
Length = 907
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 34/211 (16%), Positives = 58/211 (27%), Gaps = 25/211 (11%)
Query: 19 QAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID 76
D + Y C Y H+G+ R + D+L R LR V D
Sbjct: 26 VTQDAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGY--NVLMPMG---WD 80
Query: 77 DKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIP 130
A E+ +I + T +N + L + AT +
Sbjct: 81 ------AFGLPAENAAIKNGMPPARWTRENIAYMKQQMQALGLAIDWSRELATCDPGYYK 134
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+L ++ G AY + +D + + + G V ++
Sbjct: 135 WNQWLFLKMLDKGIAYRKTQVVNWDPVDQTVLANEQVNEGKGWRTGAVVEKREIPGYYLK 194
Query: 191 FI------LWKRSTPMEPGWESPWGRGRPGW 215
L + PGW + W
Sbjct: 195 ITDYAEELLAFVTDDRLPGWPERVKLMQENW 225
>gi|324993726|gb|EGC25645.1| methionine--tRNA ligase [Streptococcus sanguinis SK405]
Length = 679
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|167769712|ref|ZP_02441765.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
17241]
gi|167668073|gb|EDS12203.1| hypothetical protein ANACOL_01046 [Anaerotruncus colihominis DSM
17241]
Length = 690
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 22/153 (14%), Positives = 44/153 (28%), Gaps = 17/153 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + DV+ R R + V +T D+ KI ++A +
Sbjct: 51 DKLHIGHSYCTVATDVMARYKRMQGFD-----VMFLTGTDEHGQKIEQKALAAGVT---- 101
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
K + L H+ + + +++ G+ Y+
Sbjct: 102 --PQAYVDKIVDGIKELWNLLNISNDRFVRTTDDYHVESVQKIFKDLYDKGYIYKGSYKG 159
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ S K + E+
Sbjct: 160 KYCTPCESFWTDSQLVDGKCPDCGREVADAEEE 192
>gi|15612032|ref|NP_223684.1| methionyl-tRNA synthetase [Helicobacter pylori J99]
gi|7388283|sp|Q9ZKG9|SYM_HELPJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|4155547|gb|AAD06543.1| METHIONYL-TRNA SYNTHETASE [Helicobacter pylori J99]
Length = 656
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 50/165 (30%), Gaps = 16/165 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ S +Y + S+ + K+ + + +K
Sbjct: 122 SGYYCVS-CESYCAVSKVDNTDSKVLCPDCLRETTLLEEESYFFK 165
>gi|23097501|ref|NP_690967.1| methionyl-tRNA synthetase [Oceanobacillus iheyensis HTE831]
gi|25009346|sp|P59079|SYM_OCEIH RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|22775724|dbj|BAC12002.1| methionine-tRNA ligase [Oceanobacillus iheyensis HTE831]
Length = 673
Score = 43.9 bits (102), Expect = 0.059, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 42/129 (32%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DV+ R R + V Y +T D+ KI ++A++ +N +
Sbjct: 21 HIGNAYTTIACDVMARYKRMRGFD--VFY---LTGSDEHGQKIEQKAKE------MNISP 69
Query: 97 SIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K L + H + + + + G Y E +
Sbjct: 70 KAYVDDMAEGMKKLWNTLEISNDKFIRTTEEQHKKVVADIFERFLEQGDIYLDEYEGWYS 129
Query: 156 TSSIPNYGS 164
Y
Sbjct: 130 VPDETFYTE 138
>gi|237749492|ref|ZP_04579972.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
gi|229380854|gb|EEO30945.1| leucyl-tRNA synthetase [Oxalobacter formigenes OXCC13]
Length = 880
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 31/221 (14%), Positives = 59/221 (26%), Gaps = 21/221 (9%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+YR LR V D
Sbjct: 37 KFYACSMLPYPSGRLHMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMP 88
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ + T N + + + ++ ++
Sbjct: 89 AENAAMAHGIPPAEWTYSNITHMKGQMASMGLAIDWSREMTACKPDYYKWNQWMFLKMLE 148
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKR 196
G Y+ + +D + + G + ++ A L
Sbjct: 149 KGIIYQKTGTVNWDPVDQTVLANEQVIDGRGWRSGALIEKREIPMYYARITDYAEELRDY 208
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
T PGW + W + + + DIH
Sbjct: 209 VTDKLPGWPERVRTMQINWIGKSEGVRFAF---THDIHDTD 246
>gi|150014947|ref|YP_001307201.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
gi|149901412|gb|ABR32245.1| methionyl-tRNA synthetase [Clostridium beijerinckii NCIMB 8052]
Length = 645
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 59/419 (14%), Positives = 104/419 (24%), Gaps = 91/419 (21%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A ++ +
Sbjct: 23 HIGNTYTTVAADALARFKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGIT------P 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + HI + + + + G Y+
Sbjct: 72 KQHVDEVVAGIKDLWSMMNISYDKFIRTTDDYHIKAVQDIFKKLYDQGDIYKSSYEGWYC 131
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESP---- 207
S + ++ K + P + P
Sbjct: 132 TPCESFWTDTQLVNGNCPDCGRPVEKSKEEAYFFKMSKYADKLIKYIEDHPEFIQPESRK 191
Query: 208 ----WGRGRPGWHIECSAMSSHYLGKVF-------------------------------- 231
RPG C + +S G
Sbjct: 192 NEMLNNFLRPGLQDLCVSRTSFNWGVPVTFDESHVVYVWIDALSNYITALGYGQENKDLY 251
Query: 232 ------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D+H G D++ H D +G+L ++G KMSKS GN
Sbjct: 252 NKYWPADVHLIGKDILRFHTIYWPIMLMALD--LPLPKQVFGHGWLLVDGGKMSKSKGNV 309
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ L+ + + + + + + + E
Sbjct: 310 VDPVVLVNEFGVDPVRYYLLKEIPFGADGLFNNEIFIKKINSDLCNDLGNLLSRTVAMVE 369
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
K ID PA + N+LN A++ + +L R + K D
Sbjct: 370 KYFGGEMPAQDEKEAIDDELINLALSAPAKIEEAINELNIPQALEYVFELIRRANKYID 428
>gi|325997892|gb|ADZ50100.1| Methionyl-tRNA synthetase [Helicobacter pylori 2017]
Length = 538
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 13/175 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAY 146
D+IS I F D + + ++++ + +
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTYSGHYCV 127
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + N + E + + +L + E
Sbjct: 128 SCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNPE 182
>gi|168483129|ref|ZP_02708081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|172043369|gb|EDT51415.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
Length = 545
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 50/160 (31%), Gaps = 20/160 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
HIG+A ++ D+L R R E V YV N T I RA++E N +
Sbjct: 17 HIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGT----PISIRAKKE------NKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I ++F + +L R +H +Q + ++
Sbjct: 65 VKEIADFYHKEFKETFEKLGF-TYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQL 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ F K R + + D I
Sbjct: 124 YCTFDNQFLPDRFVEGKCPNCGTHLRGDQCDNCSAILDPI 163
>gi|20088942|ref|NP_615017.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
gi|23822191|sp|Q8TUM3|SYR_METAC RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|19913789|gb|AAM03497.1| arginyl-tRNA synthetase [Methanosarcina acetivorans C2A]
Length = 567
Score = 43.9 bits (102), Expect = 0.060, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+LR + V Y N
Sbjct: 128 HVGHIRNSIIGDTLARILRRAGYDVEVQYYVN 159
>gi|157413361|ref|YP_001484227.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
gi|157387936|gb|ABV50641.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9215]
Length = 514
Score = 43.9 bits (102), Expect = 0.061, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 51/183 (27%), Gaps = 19/183 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I+ D + R R + V IT +D+ KI A ++
Sbjct: 12 VNDKPHLGSVYTTIICDSIARYKRLAGED-----VMFITGVDEHGLKIQRTANEKGIEPK 66
Query: 92 IN-DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--A 148
+ DAIS + + N + + + + + NH + + + Y
Sbjct: 67 SHCDAISEVFNNNWKDWNISFDKF------IRTSSKNHELIVNEFYKRVKASDDIYMGVQ 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP--MEPGWES 206
+ S + K EP +
Sbjct: 121 KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIE 180
Query: 207 PWG 209
P
Sbjct: 181 PIE 183
>gi|323351085|ref|ZP_08086742.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
gi|322122809|gb|EFX94518.1| methionine--tRNA ligase [Streptococcus sanguinis VMC66]
Length = 679
Score = 43.9 bits (102), Expect = 0.062, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|206901012|ref|YP_002250639.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
gi|206740115|gb|ACI19173.1| lysyl-tRNA synthetase [Dictyoglomus thermophilum H-6-12]
Length = 524
Score = 43.9 bits (102), Expect = 0.062, Method: Composition-based stats.
Identities = 67/417 (16%), Positives = 119/417 (28%), Gaps = 45/417 (10%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T H+GN R ++ D LYR L+ E Y I D D + + +
Sbjct: 29 GITPSGPIHLGNLREILTGDALYRALKEKGSEVEFIY---IADTFDPLRKVYPFLPESYA 85
Query: 86 EHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-N 138
EH PI + + F+ L + + +I
Sbjct: 86 EHVGKPICEIPDPEGCHENYAEHFLEPFLDAIKVLGIEPKVIKAHESYKNGLYTEIIDLT 145
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ + E NEI + + + T + K+ ++ T
Sbjct: 146 LENNEKITEILNEIAGRNLEKNFVPLLPKCEKCGRLNTTSIISFDTSKHQVEYQCKCGHT 205
Query: 199 PMEPGWES----PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
+ + PW PG G + G ++ +
Sbjct: 206 GIADYSKGEAKLPWRLDWPGR--------WKIFGVTVEPFGKDHATTGGSYDTGKVITKE 257
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW------------ 302
E +L MS S G I+INE+LE +
Sbjct: 258 IFGYEPPYPFVYEWIYLK-GKGAMSSSKGIAISINEILEILPPSWVRYLILRYKPDKHID 316
Query: 303 -PAPVIRLAMLMTHYR-EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ + + R E I + ++ E L++ + S K + L
Sbjct: 317 FDPVNGYILLAEDYERLERIYYRLEGTEEEWAELARVYELSQVKEVPKEPGPQVPLRHLI 376
Query: 361 TVSAIQALH-KLARESTKNHDLLPIFNASAHILG-IEVCKEHLNKNISIAIEKLVQE 415
T++ I + +L +E + IL +E L K ++ +QE
Sbjct: 377 TLAQISLGNSELLKEMLVRSGYEKELSKFDEILKRVEYVNNWLQKFAPSQVKFKLQE 433
>gi|149003959|ref|ZP_01828767.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
gi|147758018|gb|EDK65024.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
Length = 568
Score = 43.9 bits (102), Expect = 0.062, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 51/160 (31%), Gaps = 20/160 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
HIG+A ++ D+L R R E V YV N T I RA++E N +
Sbjct: 40 HIGHAAALLPGDILARYYRQKGEE--VLYVSGSDCNGT----PISIRAKKE------NKS 87
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR---ATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I ++F + +L R +H +Q + ++
Sbjct: 88 VKEIADFYHKEFKETFEKLGF-TYDLYSRTDSPLHHEIVQELFLQLYEKKFLYTKKIKQL 146
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ F K +R + + D I
Sbjct: 147 YCTFDNQFLPDRFVEGKCPNCGTHSRGDQCDNCSAILDPI 186
>gi|325996303|gb|ADZ51708.1| Methionyl-tRNA synthetase [Helicobacter pylori 2018]
Length = 538
Score = 43.5 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 52/175 (29%), Gaps = 13/175 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAY 146
D+IS I F D + + ++++ + +
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDREHQKCVQNAFEIMFEKGDIYKGTYSGHYCV 127
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + N + E + + +L + E
Sbjct: 128 SCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNPE 182
>gi|325687041|gb|EGD29064.1| methionine--tRNA ligase [Streptococcus sanguinis SK72]
Length = 679
Score = 43.5 bits (101), Expect = 0.062, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|324994961|gb|EGC26874.1| methionine--tRNA ligase [Streptococcus sanguinis SK678]
gi|327462997|gb|EGF09318.1| methionine--tRNA ligase [Streptococcus sanguinis SK1]
Length = 665
Score = 43.5 bits (101), Expect = 0.063, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|157149888|ref|YP_001450809.1| methionyl-tRNA synthetase [Streptococcus gordonii str. Challis
substr. CH1]
gi|157074682|gb|ABV09365.1| methionine-tRNA ligase [Streptococcus gordonii str. Challis substr.
CH1]
Length = 666
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|121535687|ref|ZP_01667491.1| hypothetical protein TcarDRAFT_0122 [Thermosinus carboxydivorans
Nor1]
gi|121305718|gb|EAX46656.1| hypothetical protein TcarDRAFT_0122 [Thermosinus carboxydivorans
Nor1]
Length = 127
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 9/46 (19%), Positives = 22/46 (47%), Gaps = 5/46 (10%)
Query: 388 SAHILGIEVCK-----EHLNKNISIAIEKLVQERLILLKMKKFSSA 428
A ILGI V + E + ++ ++ ++ R + K ++++
Sbjct: 15 MADILGILVKERAGLLEGDCELVAGLMDIIIAVRQEARQRKDWATS 60
>gi|325690672|gb|EGD32673.1| methionine--tRNA ligase [Streptococcus sanguinis SK115]
Length = 679
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 35 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 89
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 90 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 150 FTESQLAEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 209
Query: 214 G 214
Sbjct: 210 D 210
>gi|315045362|ref|XP_003172056.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
gi|311342442|gb|EFR01645.1| methionyl-tRNA synthetase [Arthroderma gypseum CBS 118893]
Length = 592
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 24/144 (16%), Positives = 48/144 (33%), Gaps = 16/144 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-GEKCVTYVRNITDIDD---KIIERARQEHPSI 90
V HIG+ +++ D+L R G+ + +T D+ KI + A Q
Sbjct: 64 VNAAPHIGHLYTILIADILKRWQVLIGNGDAKL-----LTGTDEHGMKIQQAALQNGLE- 117
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN 149
+ +N + F + H + + +N+ G+ YE
Sbjct: 118 -----PQALCDRNCETFKILAREANASHDHFIRTTDSAHKAAVQFFWENLNHRGYIYEGK 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQ 173
+E + S Y + + +
Sbjct: 173 HEGWYSVSDETFYPASAVHSTLDP 196
>gi|308271750|emb|CBX28358.1| Methionyl-tRNA synthetase [uncultured Desulfobacterium sp.]
Length = 640
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 17/156 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I+ DV+ R + + +T D DK++ A +E
Sbjct: 14 VNAKPHLGHAYTTIIADVVCRYNTMLGKDAFL-----LTGTDEHGDKVVRAAEKE----- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
N K ++ F L + +HI + ++Q I G Y
Sbjct: 64 -NLNPKEYADKISRLFRNLWPELNIKYNSFIRTTDPSHIEIVKQVLQKIYDSGDIYFSEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
F K + + ++ +
Sbjct: 123 EGLYCFGCERFYTERELVNGKCPDHETEPETIKESN 158
>gi|166157037|emb|CAO79494.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
[uncultured candidate division WWE3 bacterium
EJ0ADIGA11YD11]
Length = 471
Score = 43.5 bits (101), Expect = 0.064, Method: Composition-based stats.
Identities = 60/341 (17%), Positives = 107/341 (31%), Gaps = 51/341 (14%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD--------------ID---- 76
V D HIG+A I+ D + R R G + V +V TD +D
Sbjct: 14 VNDVIHIGHAYQKILADCVARFERIRRGSENVFFVTG-TDEHGQKVYNVAKERGVDVKEF 72
Query: 77 -DKIIERARQEHPSIPINDAISIIT-----SKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
D+I ++ +++ SI I+ I T K + F + + +
Sbjct: 73 VDEISKKDQEQQDSIQISYDRFIRTTDGDHKKTAEDFFRKVYNAGYIYKDNYKGLYCEGC 132
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSR----RKIDEQKMGTRVPEKYHKK 186
+ +++I A EI + S R + E+ +P +++
Sbjct: 133 ESYKTEKDLINGRCALHPGLEIQVVEEENYFFKFSSFKDFLRTLYEKNPDFVLPNSRYRE 192
Query: 187 NP------ADFILWKRSTPMEPGWESPWGRGRPGW--------HIECSAMSSHYLGKVFD 232
D + +R + G E P + W ++ + +
Sbjct: 193 MYAFIDTIEDIPITRRKEKLPWGIECPIDKNHVIWVWFDALINYLTFGLQVNSWDEDTEI 252
Query: 233 IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELL 292
+H G D H A N FL++ G+K+SKS GN + +L+
Sbjct: 253 VHFLGKDNARMHALLWPCMLKAAGY--SMPTHVYVNAFLSMNGKKISKSLGNIVAPKDLV 310
Query: 293 ETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
E + + E DF+ E
Sbjct: 311 ERYGADPVRY------YFLRYGPIIEDSDFSESHFQEVYNA 345
>gi|78044237|ref|YP_361414.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
gi|77996352|gb|ABB15251.1| methionyl-tRNA synthetase [Carboxydothermus hydrogenoformans
Z-2901]
Length = 653
Score = 43.5 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 23/143 (16%), Positives = 39/143 (27%), Gaps = 17/143 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI +A+ + S
Sbjct: 16 DNLHIGHAYTTVAADTMARFKRMTGYD--VWF---LTGSDEHGQKIERKAKSQGLS---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
F L H + + Q + G Y+
Sbjct: 67 --PKEYVDPIVDSFKHLWKLLDISYDDFIRTTEERHKKVVQAIFQKLYDQGDIYKSAYEG 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQ 173
+ G K +
Sbjct: 125 WYCTPCEAFWTEGKLIDGKCPDC 147
>gi|30018309|ref|NP_829940.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|229125556|ref|ZP_04254589.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
gi|38258299|sp|Q81JA8|SYM1_BACCR RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|29893849|gb|AAP07141.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 14579]
gi|228657873|gb|EEL13678.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-Cer4]
Length = 660
Score = 43.5 bits (101), Expect = 0.065, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMNISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|312879847|ref|ZP_07739647.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
gi|310783138|gb|EFQ23536.1| leucyl-tRNA synthetase [Aminomonas paucivorans DSM 12260]
Length = 829
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 32/190 (16%), Positives = 54/190 (28%), Gaps = 28/190 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + D+L R LR V Y A E+ ++
Sbjct: 47 HMGHLRNYSIGDLLARFLRMQGY--NVLYPIGF---------DAFGLPAENAALKYGVQP 95
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
S T KN + R+ C + T + +L G AY + +
Sbjct: 96 SEWTWKNIDHMTEQLHRMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRKHAPVN 155
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME--------PGWE 205
+ S + ++ + R K+ + L E PGW
Sbjct: 156 WCDSCQTV---LANEQVIDGGHCWRCGTAVKKRGLEQWFLRTTDYAQELLDCLDELPGWP 212
Query: 206 SPWGRGRPGW 215
+ W
Sbjct: 213 ERVKIMQKNW 222
>gi|224475632|ref|YP_002633238.1| methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
gi|222420239|emb|CAL27053.1| Methionyl-tRNA synthetase [Staphylococcus carnosus subsp. carnosus
TM300]
Length = 667
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A + S
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAHKAGVSEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMISGIKSLWEKLEISNDDFIRTTEKRHEEVVAKVFERLLEQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|319891443|ref|YP_004148318.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|317161139|gb|ADV04682.1| Methionyl-tRNA synthetase [Staphylococcus pseudintermedius
HKU10-03]
gi|323465387|gb|ADX77540.1| methionyl-tRNA synthetase [Staphylococcus pseudintermedius ED99]
Length = 657
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A+ S
Sbjct: 20 HIGHAYSTVAGDVIARYKRLQGFD--VRY---LTGTDEHGQKIQEKAQNAGMSEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -DYLDGMIKDIKALWEKLDISNDDFIRTTERRHTEVVEKIFEKLLSKGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETFYTE 137
>gi|217966690|ref|YP_002352196.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
gi|217335789|gb|ACK41582.1| methionyl-tRNA synthetase [Dictyoglomus turgidum DSM 6724]
Length = 634
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 50/421 (11%), Positives = 107/421 (25%), Gaps = 88/421 (20%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG IV D R Y + V + +T +D+ K+ A++ + +
Sbjct: 25 PHIGTVYTTIVADTFARF--YRLKDYDVFF---LTGLDEHGQKLARTAQERGYTPQ--EY 77
Query: 96 ISIITSKNTQQFVKD-------------------TTRLACLAPTHQPRATNHIPQMIYLI 136
+ ++ K + + K L ++
Sbjct: 78 VDLMAQKFIETWEKIGITNDDFIRTTEKRHEEVVQKVFQKLYDKGYLYKGSYAGWYCTPC 137
Query: 137 QNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
+ + + S + + +
Sbjct: 138 ETFWQKEELHDGNCPACGRPVEWLEEETYYFKLSAFAEPLLKYIEEHPEFVYPETRRNEV 197
Query: 191 FILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHYL 227
K + G P G+ + + Y
Sbjct: 198 ISFIKSGLKDISATRTTVKWGIPVPFDPKHTVYVWFDALVNYISALGYLTDDDSKFKRYW 257
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
D+H G D++ H A + + +GF ++G K+SKS GN +
Sbjct: 258 --PADVHLIGKDILRFHAIIWPAILMALN--IPLPKTVLAHGFWTIKGGKISKSKGNRVD 313
Query: 288 INELLETKKFGGRSWP-------APVIRLAMLMTHYREPID------------------F 322
+EL+ + + H R D +
Sbjct: 314 PHELINLYGVDALRYFLLREVPLGLDGEYSDEAFHRRYHSDLANDLGNLLNRVLTVAEKY 373
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
T ++ E + + + KG + + N +A+ + ++ +E+ + D
Sbjct: 374 TEGKVPEPKEFQEE-DKFLLQKGDDMANKVEEAMANFNPANALTYIWEVVQEANRYIDQQ 432
Query: 383 P 383
Sbjct: 433 A 433
>gi|116070546|ref|ZP_01467815.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
gi|116065951|gb|EAU71708.1| Leucyl-tRNA synthetase class Ia [Synechococcus sp. BL107]
Length = 884
Score = 43.5 bits (101), Expect = 0.067, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 76 HMGHVRNYVITDVIARVQRMRG--DSVLHPMG---WD------AFGLPAENAAIERNIDP 124
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 125 GEWTDRNIDQMRDQLDRLGLSIDWDREQATCHSDYYR 161
>gi|254779595|ref|YP_003057701.1| methionyl-tRNA synthetase [Helicobacter pylori B38]
gi|254001507|emb|CAX29525.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
[Helicobacter pylori B38]
Length = 650
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 12/167 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
D+IS I F D + + + ++++ +I AY
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIY--KGAYSGYY 125
Query: 151 EIIFDTSSIPNYGSFSRRK-IDEQKMGTRVPEKYHKKNPADFILWKR 196
+ ++ + + K + + + K
Sbjct: 126 CVSCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKP 172
>gi|198434929|ref|XP_002128793.1| PREDICTED: similar to methionyl-tRNA synthetase [Ciona
intestinalis]
Length = 883
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 25/201 (12%), Positives = 51/201 (25%), Gaps = 21/201 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R V Y+ TD +A QE
Sbjct: 263 PYVNNVPHLGNIIGCVLSADVFSRYCRLRGW--NVLYICG-TDEYGTA----TETKAAQE 315
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY--LIQNIILHGH 144
+ I K + + + T ++ +
Sbjct: 316 GVT------PKEICDKYHKIHSEVYEWFSIGFDYFGRTTTECQTKIAQDIFWHLHRNNHL 369
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+ ++ F ++ K + +S +
Sbjct: 370 IKQTVEQLYCGRCERFLADRFVEGTCPLCAFEDARGDQCDKCGKLINAVELKSPKCKMCS 429
Query: 205 ESPWGRGRPGWHIECSAMSSH 225
++P R ++ S +
Sbjct: 430 DTPAIRTSEHLFVDLSKLEPK 450
>gi|171184685|ref|YP_001793604.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
gi|229558039|sp|B1YAS9|SYL_THENV RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|170933897|gb|ACB39158.1| leucyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
Length = 945
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R +V DV+ R R+ + V +
Sbjct: 47 GAIHIGHGRTYLVADVMARFQRHLG--RSVLFPMGF 80
>gi|332367240|gb|EGJ44975.1| methionine--tRNA ligase [Streptococcus sanguinis SK1059]
Length = 665
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|308184777|ref|YP_003928910.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
gi|308060697|gb|ADO02593.1| methionyl-tRNA synthetase [Helicobacter pylori SJM180]
Length = 650
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 67/449 (14%), Positives = 118/449 (26%), Gaps = 84/449 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTS------------------SIPNYGSFSRRKIDEQKMG 176
++ A N++++ F + +
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFKLSAYEKPLLEFYAKNPEAILPI 187
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
R E L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLND 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFERARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILLSKWPQT 340
GN + +L + +R +L + + DF+ + L E
Sbjct: 306 LGNVLDAQKL-------AMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLG 358
Query: 341 ST------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNAS 388
+ L + ++ +H++ + H L
Sbjct: 359 NLLNRLLGMAKKYFNYSLKSDKITAYYPKELEKVHQILDNANSFVPKMQLHKALEELFNV 418
Query: 389 AHILGIEVCKEHL----NKNISIAIEKLV 413
L + KE N S +E L+
Sbjct: 419 YDFLNKLIAKEEPWVLHKNNESEKLEALL 447
>gi|262283105|ref|ZP_06060872.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
gi|262261357|gb|EEY80056.1| methionyl-tRNA synthetase [Streptococcus sp. 2_1_36FAA]
Length = 666
Score = 43.5 bits (101), Expect = 0.068, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|114327741|ref|YP_744898.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
gi|114315915|gb|ABI61975.1| methionyl-tRNA synthetase [Granulibacter bethesdensis CGDNIH1]
Length = 514
Score = 43.5 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 47/318 (14%), Positives = 78/318 (24%), Gaps = 57/318 (17%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A + DVL R R E V + +T D+ K+ + A
Sbjct: 14 VNGAPHIGHAYTCVATDVLARWKRLEGRE--VFF---LTGTDEHGQKVEKAAADAGVDPQ 68
Query: 92 -----INDAISIITSKNTQQFV--------KDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+ D + K + +A L + R ++
Sbjct: 69 TFIDGMADGFRAMAEKMNTSHDRFIRTTEPEHKKAVAALWSRLEERGEIYLGSYEGWYAV 128
Query: 139 IIL--------------HGHA-------YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
+A F S + +
Sbjct: 129 RDEAFYGEDELTLKPDGKRYAPTGAPVERVTEPSYFFRLSRWGDALLKLYEDQPDFIAPQ 188
Query: 178 RVPEKY-HKKNPADFILWKRSTPMEPGWESPWG---RGRPGWHIECSAMSSHYLGK---- 229
+ L T G P + +++
Sbjct: 189 ARRNEVISFVKQGLTDLSISRTSFSWGVPVPGDAKHVVYVWLDALTNYLTAVGYPDETSP 248
Query: 230 -----VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H A A +G+ +EG KMSKS GN
Sbjct: 249 AWPFWPADLHMVGKDILRFHAIFWPAFLMAAG--LPLPRRVFAHGWWTVEGEKMSKSLGN 306
Query: 285 FITINELLETKKFGGRSW 302
I L++ +
Sbjct: 307 TIEPGALVDEFGLDPVRF 324
>gi|320100795|ref|YP_004176387.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753147|gb|ADV64905.1| methionyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 514
Score = 43.5 bits (101), Expect = 0.069, Method: Composition-based stats.
Identities = 28/163 (17%), Positives = 46/163 (28%), Gaps = 19/163 (11%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIND 94
HIG+A + DVL R R V + +T D+ KI + +
Sbjct: 21 PPHIGHAYTSVFADVLARFNRLIGN--NVFF---LTGNDEHGLKI------QRVAEKAGK 69
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY--EANN 150
+ + + L H R T H + I G Y + +
Sbjct: 70 HPKEFVDEMASVYREYWRTLGIS-YDHFIRTTDPYHEKAVKEAFSYIHGKGLIYKAKYSG 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
D + G + P +Y ++ F L
Sbjct: 129 MYCVDCEKYYSPGEYIEVDGKPHCPIHNKPLEYLEEETYYFKL 171
>gi|319790219|ref|YP_004151852.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114721|gb|ADU97211.1| methionyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 526
Score = 43.5 bits (101), Expect = 0.070, Method: Composition-based stats.
Identities = 24/163 (14%), Positives = 40/163 (24%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A DV+ R R+ + V + +T D+ KI + A + S
Sbjct: 14 VNDKPHLGHAYTTTAADVVARFNRFLG--RDVFF---LTGTDEHGQKIQQAAEKMGMS-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEA 148
+ F K L Q I++ + E
Sbjct: 67 ----PKEFVDRLVPVFKKLWEVLNISYDHFIRTTDPEHVKAVQHIFMKCYENGDIYLGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ K+ K
Sbjct: 123 EGWYCIPCETYYTEKDLIDGKLCPACKREVTRVKEESYFFRLS 165
>gi|103486745|ref|YP_616306.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
gi|98976822|gb|ABF52973.1| methionyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
Length = 527
Score = 43.5 bits (101), Expect = 0.070, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 44/142 (30%), Gaps = 15/142 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I DV+ R R + V V T D+ K+ + AR + +
Sbjct: 19 GRPHIGHAYEAIATDVMARFQRARG--RNVRLV---TGTDEHGLKMFQTARDQGRATI-- 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++ + F + +L + H + + + +G Y E
Sbjct: 72 ----DLANEMSGYFREMYAKLNISYDMFMRTSDPAHHAASQAIWKAMEANGDLYLDRYEG 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQK 174
+ Y E
Sbjct: 128 WYSVRDEAFYDESELTDGGEGI 149
>gi|288818357|ref|YP_003432705.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|288787757|dbj|BAI69504.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
gi|308751950|gb|ADO45433.1| leucyl-tRNA synthetase [Hydrogenobacter thermophilus TK-6]
Length = 606
Score = 43.5 bits (101), Expect = 0.071, Method: Composition-based stats.
Identities = 34/178 (19%), Positives = 58/178 (32%), Gaps = 20/178 (11%)
Query: 14 KITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
++ F+A D ++YV P H+G+ R + DV+ R LR+ V +
Sbjct: 19 ELELFKAHDEGK-KVYVLEMFPYPSGRIHMGHVRNYTIGDVVARFLRFKGY--RVLHPMG 75
Query: 72 ITDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN- 127
D A E+ +I + T KN RL + AT
Sbjct: 76 ---WD------AFGLPAENAAIKQGIHPADWTYKNIAYMKNQLKRLGFSYDWDREIATCD 126
Query: 128 --HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ ++ G AY E+ + + + + GT V +K
Sbjct: 127 PEYYRWNQWIFLKFYERGLAYRKLAEVNWCPNDETVLANEQVIDGRCWRCGTPVIKKE 184
>gi|332673839|gb|AEE70656.1| methionine--tRNA ligase [Helicobacter pylori 83]
Length = 650
Score = 43.5 bits (101), Expect = 0.071, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 12/167 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
D+IS I F D + + + ++++ +I AY
Sbjct: 68 AYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIY--KGAYSGYY 125
Query: 151 EIIFDTSSIPNYGSFSRRK-IDEQKMGTRVPEKYHKKNPADFILWKR 196
+ ++ + + K + + + K
Sbjct: 126 CVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKP 172
>gi|328953224|ref|YP_004370558.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
gi|328453548|gb|AEB09377.1| Methionyl-tRNA synthetase [Desulfobacca acetoxidans DSM 11109]
Length = 638
Score = 43.5 bits (101), Expect = 0.071, Method: Composition-based stats.
Identities = 57/420 (13%), Positives = 105/420 (25%), Gaps = 88/420 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V HIG+A ++ D L R R E T D +K++E AR P
Sbjct: 17 VNAEPHIGHAYTTVLADTLARFHRLMGAETRFQ-----TGTDEHGEKVVEAARARGI--P 69
Query: 92 INDAISIITSKNTQQFVKDT-------TRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ D + I+ + + + L N + + + +
Sbjct: 70 VKDYVDQISGRFRGTWDQMQISYDHFIRTTDPLHIQVVQYVLNKVNSQGDIYFSEYAGHY 129
Query: 145 AYEANNEI------------------IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
Y + + S + + E + +
Sbjct: 130 CYGCERFVLERELVDGKCPDHQVKPTYVKEGNYFFRMSRYQDWLIEYIQTHTDFIRPERY 189
Query: 187 NPADFILWK--------RSTPMEPGWESPWGRG---------------RPGWHIECSAMS 223
K W P G A+
Sbjct: 190 RNEVLSFLKEPLEDLCISRPRARVQWGIPLPFDDNYVTYVWFDALINYLTGLGYPDQALV 249
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+ H D++ PH A +E ++ +H + KMSK+ G
Sbjct: 250 KKFWPAC--QHLIAKDILKPHGIYWPTILK-ATGLEPYHHLNVHGY-WQIGQGKMSKTLG 305
Query: 284 NFITINELLETKKFGGRSW----------------PAPVIRL---------AMLMTHYRE 318
N + L++ + A V R+ +
Sbjct: 306 NVVEPQRLVKQYGLDQVRYFFLREMVYGLDAVFSEDALVGRINADLANDLGNLFSRSLAM 365
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ + EA S + + ++ L L +L A+Q L +L E +
Sbjct: 366 VFKYRQGVVPEAGPYESADEELRSLAEMVRDDYLGYL-PELEFHKALQRLWELIGEINRY 424
>gi|229542295|ref|ZP_04431355.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
gi|229326715|gb|EEN92390.1| methionyl-tRNA synthetase [Bacillus coagulans 36D1]
Length = 655
Score = 43.5 bits (101), Expect = 0.071, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 41/151 (27%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI +A+++ +
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD-----VMFLTGTDEHGQKIQRKAKEKGVT------P 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EANNEII 153
+ +L H + + + ++ G Y E
Sbjct: 71 QQYVDEIVAGIQDLWKKLEISNDDFIRTTQDRHKKAVEKIFKKLLDQGDIYLGEYEGWYC 130
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + ++
Sbjct: 131 TPCESFFTERQLVDGKCPDCGRPVEKVKEES 161
>gi|239616428|ref|YP_002939750.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|239505259|gb|ACR78746.1| methionyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 639
Score = 43.5 bits (101), Expect = 0.071, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 47/131 (35%), Gaps = 13/131 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A IV D++ R R + V + +T D+ K+++ A++E+
Sbjct: 18 PHIGSAYTTIVADIVARYKRLSGYD--VFF---LTGTDEHGQKVLQAAKEENLDPQTYSD 72
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K + + + H+ + ++ ++ +G Y+ E +
Sbjct: 73 --QLAEKFKVLWKELQ---ITNDYFVRTTDERHMKTVQLFVKKMLENGDVYKGKYEGWYC 127
Query: 156 TSSIPNYGSFS 166
+
Sbjct: 128 VPCETFWTEED 138
>gi|78356637|ref|YP_388086.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
gi|78219042|gb|ABB38391.1| methionyl-tRNA synthetase [Desulfovibrio desulfuricans subsp.
desulfuricans str. G20]
Length = 642
Score = 43.5 bits (101), Expect = 0.072, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 44/153 (28%), Gaps = 11/153 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D L R + K + +T D DKI++ A + +
Sbjct: 13 VNAKPHLGHAYTTIVADALRRF--HTLLGKKTFF---LTGTDEHGDKIVQAAEKNGCTPQ 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + I++ + T + ++ + + E
Sbjct: 68 --EYVDSISATFRDLWPSMGITYDRFVRTTDESHKKCVQAVLQKVYDSGDIYFG-EYGGH 124
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + ++ + +
Sbjct: 125 YCYGCERFYTEKELENGLCPQHQVKPEYIAEKN 157
>gi|261838373|gb|ACX98139.1| methionyl-tRNA synthetase [Helicobacter pylori 51]
Length = 653
Score = 43.5 bits (101), Expect = 0.072, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 54/167 (32%), Gaps = 12/167 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDVPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
D+IS I F D + + + ++++ +I AY
Sbjct: 68 AYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIY--KGAYSGYY 125
Query: 151 EIIFDTSSIPNYGSFSRRK-IDEQKMGTRVPEKYHKKNPADFILWKR 196
+ ++ + + K + + + K
Sbjct: 126 CVSCESYCAISKTDNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKP 172
>gi|254797222|ref|YP_003082063.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
gi|254590469|gb|ACT69831.1| methionyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
Length = 521
Score = 43.5 bits (101), Expect = 0.072, Method: Composition-based stats.
Identities = 53/315 (16%), Positives = 92/315 (29%), Gaps = 52/315 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY----------VRNITD-------ID- 76
V D HIG+A ++ DVL R LR E V + V+N T ID
Sbjct: 30 VNDNPHIGHAYSSLIADVLTRALRLAGHE--VRFTTGTDEHGQKVQN-TAKKHGKCEIDF 86
Query: 77 -DKIIERAR-----------------QEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
D + R R + + S I+ N+ + + +
Sbjct: 87 VDHVSRRFRDLCVAMHYEFSDFIRTTETRHKEAVQTLWSTISKNNSISLGEYSGWYSERD 146
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT---SSIPNYGSFSRRKIDEQKM 175
A Y + N + + +
Sbjct: 147 EAFYTEAELQNGLAPTGAPVSWTKEACYFFKLSQFSEPLKKLYAENPTFIQPKSRFNEML 206
Query: 176 GTRVPEKYHKKNPADFILWKRSTPMEP-----GW---ESPWGRGRPGWHIECSAMSSHYL 227
+ + W + P +P W + + + ++ S +
Sbjct: 207 AFLNTGMHDLSISRTRVKWGINVPDDPAHTVYVWLDALTNYVSSIGYPNTSTDSLFSAFW 266
Query: 228 GKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
IH G D++ H A A+ KT ++ + +G+ +G K+SKS GN I
Sbjct: 267 DNARVIHIIGKDILRFHSIYWPAFLMAAN--LKTPDVILAHGWWLNDGEKISKSLGNIID 324
Query: 288 INELLETKKFGGRSW 302
EL+ +
Sbjct: 325 PFELISEFGVDPVRY 339
>gi|73669025|ref|YP_305040.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
gi|90103016|sp|Q46CD2|SYK_METBF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|72396187|gb|AAZ70460.1| lysyl-tRNA synthetase [Methanosarcina barkeri str. Fusaro]
Length = 537
Score = 43.5 bits (101), Expect = 0.072, Method: Composition-based stats.
Identities = 59/343 (17%), Positives = 106/343 (30%), Gaps = 40/343 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T HIGN R ++ D +YR L Y I D D + + +
Sbjct: 27 GITPSGNIHIGNMREVVTADAVYRALSNKGANADFIY---IADNYDPLRKVYPFLPESYV 83
Query: 86 EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
EH PI++ + + F++ RL ++ + I+
Sbjct: 84 EHVGKPISEIPCPCGNCANYAEHFLKPFLEALRRLGINPQVYRADEMYKTGKYTEAIKTA 143
Query: 140 ILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
++ A + E+ T + R + T+V + D++ +
Sbjct: 144 LVKRDAIAKILEEVSGKTVAADWSPFNPRCNQCGKITTTKVTGFDLEAETVDYVCACGHS 203
Query: 199 PMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ P G + W P LG + G ++
Sbjct: 204 GIVPMAGGGKLTWRVDWPAR--------WSVLGVTVEPFGKDHASKGGSYDTGKRIVREI 255
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E I + + MS S G I+I+++LE P V+R ++ T
Sbjct: 256 FGHEPPYPIVYEW-IMLGKQGAMSSSTGVVISISDMLEI-------IPPEVLRYLIIRTK 307
Query: 316 YREPIDFTVQRL-----TEAEILLSKWPQTSTSKGIIDPAVLS 353
+ I F + E E L +++ + S G V
Sbjct: 308 PEKHIQFDPGQPLLTLVDEYERLRTQFRENDPSLGTFQKRVYE 350
>gi|296271958|ref|YP_003654589.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
gi|296096133|gb|ADG92083.1| arginyl-tRNA synthetase [Arcobacter nitrofigilis DSM 7299]
Length = 530
Score = 43.5 bits (101), Expect = 0.074, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ R+ + Y N
Sbjct: 116 PT--GPLHIGHARGAIFGDTLARVGRHLGYDVQTEYYIN 152
>gi|13507762|ref|NP_109711.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
gi|2501031|sp|P75091|SYM_MYCPN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|1673790|gb|AAB95779.1| methionyl-tRNA synthetase [Mycoplasma pneumoniae M129]
Length = 512
Score = 43.5 bits (101), Expect = 0.074, Method: Composition-based stats.
Identities = 21/165 (12%), Positives = 42/165 (25%), Gaps = 13/165 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DV+ R + E +T D+ KI +A+
Sbjct: 17 PHIGHAFTTILADVIKRYKQQNGYEAYF-----LTGTDEHGNKIESKAKSLGLDPQTFVD 71
Query: 96 IS-IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL----IQNIILHGHAYEANN 150
+ + +Q + H Q++Y Q+ + E
Sbjct: 72 QNVAYFQQMWKQLDINFDHFIRTTDLSHKAQVQHAFQLLYDKGLIYQSNWEGAYCVECEQ 131
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ + ++ + K
Sbjct: 132 NYFTYDKQTMLCEIGHQLTLVQEPSLFIAFKDSKDWIGEMIATNK 176
>gi|294899809|ref|XP_002776754.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
gi|239883955|gb|EER08570.1| Methionyl-tRNA synthetase, putative [Perkinsus marinus ATCC 50983]
Length = 1046
Score = 43.5 bits (101), Expect = 0.074, Method: Composition-based stats.
Identities = 32/257 (12%), Positives = 71/257 (27%), Gaps = 28/257 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
AHIG+A + D L R R + V + T D+ KI ++A + +
Sbjct: 177 AHIGHAYEAVAADALARWNRV--YGRDVEFC---TGTDEHGQKIAQKAESKGKT------ 225
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEII 153
I + + ++ R T +H+ L + + G Y N
Sbjct: 226 PQEICDIY-ASAFQALNQRLRISNDIYIRTTDEHHMKTCQKLWEIVSSKGDIYLDNYTGY 284
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ ++ D + T P + F + + + +S +P
Sbjct: 285 YLVREERYVTDAEAKEWDYKDPSTGKPLTEMSEESYFFRMGRYQQRLVDHIKSHPDFIKP 344
Query: 214 GWHIECSAM-----------SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+ + S I G +++ + + ++
Sbjct: 345 EQYRQQILARLEEPLRDLSCSRRTFSWGIPIPGSDDHVMYVWFDALTNYLSAVNGLDSDK 404
Query: 263 NIWIHNGFLNLEGRKMS 279
+ + +
Sbjct: 405 PHYWPANAHIIGKDIIW 421
>gi|85000239|ref|XP_954838.1| methionyl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65302984|emb|CAI75362.1| methionyl-tRNA synthetase, putative [Theileria annulata]
Length = 884
Score = 43.5 bits (101), Expect = 0.074, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 15/205 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+A +V DV+ R Y + V + TD I K++ A+Q+ N
Sbjct: 307 PHVGHAYEAVVCDVISRY--YRMFGRRVIFSTG-TDEHGI--KVLTTAKQQ------NKT 355
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + + +F K RL + H+ + + + G Y +
Sbjct: 356 PIEVCNYYSNEFKKFYKRLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIYLGEYNGYY 415
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ + D + + P ++ F + + T + + P
Sbjct: 416 SMREERFIPNTEAKLTDFKDPVSGKPYDLMSESSYFFKMERYRTQLVDYINTNQDFIYPK 475
Query: 215 WHIECSAMSSHYLGKVFDIHGGGLD 239
I D
Sbjct: 476 KVKNEILTRLKDQLDDLSISRTSFD 500
>gi|325959090|ref|YP_004290556.1| methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
gi|325330522|gb|ADZ09584.1| Methionyl-tRNA synthetase [Methanobacterium sp. AL-21]
Length = 658
Score = 43.5 bits (101), Expect = 0.075, Method: Composition-based stats.
Identities = 20/159 (12%), Positives = 38/159 (23%), Gaps = 14/159 (8%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPIN 93
H+G+ R I D+ R R + V +V TD + I +A +E
Sbjct: 15 GPCHLGHLRSTYIPADIYARYNRMKGND--VLFVCA-TD-EHGTPIAVKAEKEG------ 64
Query: 94 DAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + + D L + H + G+ YE +
Sbjct: 65 KPPKEVAGRYHEMIKTDLESCNISLDSFTRTTDPKHYEISQNFFLKLYEKGYIYEKVIKQ 124
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + +
Sbjct: 125 PYCEECGRFLPDRYVEGTCPFCETEGARGDHCESCGRHL 163
>gi|146323739|ref|XP_752043.2| methionyl-tRNA synthetase [Aspergillus fumigatus Af293]
gi|129557560|gb|EAL90005.2| methionyl-tRNA synthetase, putative [Aspergillus fumigatus Af293]
Length = 574
Score = 43.5 bits (101), Expect = 0.075, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 10/160 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V H+G+ M++ D+L R R G+K + TD + + +
Sbjct: 64 VNAAPHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD-----EHGMKIQQAASAAGM 116
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
N + F H R T+ H + Y + + G+ Y A +E
Sbjct: 117 DPQAFCDMNCKTFQALAKAANV-DYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEG 175
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ S Y + + G ++ ++
Sbjct: 176 WYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWS 215
>gi|78212910|ref|YP_381689.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|123743315|sp|Q3AJU8|SYL_SYNSC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|78197369|gb|ABB35134.1| leucyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 875
Score = 43.5 bits (101), Expect = 0.075, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 67 HMGHVRNYVITDVIARVQRMLG--HAVLHPMG---WD------AFGLPAENAAIERNVDP 115
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 116 GEWTDRNIDQMRAQLDRLGLSIDWSREQATCHSDYYR 152
>gi|208434910|ref|YP_002266576.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
gi|208432839|gb|ACI27710.1| methionyl-tRNA synthetase [Helicobacter pylori G27]
Length = 650
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRE 153
>gi|86606068|ref|YP_474831.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
gi|86554610|gb|ABC99568.1| methionyl-tRNA synthetase [Synechococcus sp. JA-3-3Ab]
Length = 516
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 52/334 (15%), Positives = 83/334 (24%), Gaps = 70/334 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A + D + R R K V V T D+ KI A + P
Sbjct: 15 VNAAPHIGSAYTTLAADAIARYHRLRG--KDVLMV---TGTDEHGQKIQRTAEERGL--P 67
Query: 92 INDAISIITS-----------------KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + + T K R + Q Y
Sbjct: 68 PQQHCDEIAAQFAQLWQLLDIRYDRFIRTTDPRHKAIVREFFQRVWDRGDIFVGRQQGWY 127
Query: 135 LIQNIILHGHAYEANNEIIF----------DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + D + S + K++ +
Sbjct: 128 CVACEEFKDESELLEGGFCPLHPNKKVEWKDEENYFFRLSRYQEKLEALYAEHPEFIQPE 187
Query: 185 KKNPADFILWK------RSTPMEPGWESPWG-------RGRPGWHIECSAMSSHYLGKVF 231
+ K + W P+ I + + +
Sbjct: 188 SRRNEVINFVKQGLRDFSISRPSVSWGIPFPADPSQTLYVWFDALINYLSAAVDPEDEPT 247
Query: 232 -----------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
D+H G D++ H A A +GFL +G KM K
Sbjct: 248 LENALRRYWPADVHLVGKDIVRFHAIYWPAMLMSAG--LPLPRQIFGHGFLTKDGLKMGK 305
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
S GN + EL+ + + A +R L
Sbjct: 306 SLGNTLDPFELV-------QRYGADAVRYYFLTE 332
>gi|88608827|ref|YP_506390.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
gi|88600996|gb|ABD46464.1| leucyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
Length = 851
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 44/146 (30%), Gaps = 17/146 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R ++ DVL R R V + I A E +I N
Sbjct: 63 HIGHLRNYVIGDVLARYKRSQGY--NVLH---------PIGWDAFGLPAEKAAINSNIHP 111
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
I T KN + + + +T + + G AY N+E+
Sbjct: 112 RIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAYRKNSEVN 171
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRV 179
+D + + G V
Sbjct: 172 WDPIDKTVLANEQVIDGRGWRSGAVV 197
>gi|71027023|ref|XP_763155.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68350108|gb|EAN30872.1| methionyl-tRNA synthetase, putative [Theileria parva]
Length = 691
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 30/205 (14%), Positives = 60/205 (29%), Gaps = 15/205 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+A ++ DV+ R Y + V + TD I K++ A+Q+ N
Sbjct: 112 PHVGHAYEAVICDVISRY--YRMFGRRVIFSTG-TDEHGI--KVLTTAKQQ------NKT 160
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + +F K RL + H+ + + + G Y +
Sbjct: 161 PIEVCDYYSNEFKKFYERLLVEYDRFIRTTSESHMKAAKTIWRTVFKKGDIYLGEYNGYY 220
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ + D + + P ++ F + + TP+ + P
Sbjct: 221 SMREERFIPNTEAKLTDFKDPVSGKPYDLMSESSYFFTMERYRTPLVEYISTNQDFIYPK 280
Query: 215 WHIECSAMSSHYLGKVFDIHGGGLD 239
I D
Sbjct: 281 KVRNEILTRLKDQLDDLSISRTSFD 305
>gi|325568422|ref|ZP_08144789.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
gi|325158191|gb|EGC70344.1| methionine--tRNA ligase [Enterococcus casseliflavus ATCC 12755]
Length = 668
Score = 43.5 bits (101), Expect = 0.077, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A +
Sbjct: 21 HIGNSYTTIACDAVARYKRLMGFD--VFY---LTGVDEHGQKIEKKAEELGVD------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + Q ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKTAVQKIFQQLLDQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEYFTE 138
>gi|317182290|dbj|BAJ60074.1| methionyl-tRNA synthetase [Helicobacter pylori F57]
Length = 653
Score = 43.5 bits (101), Expect = 0.078, Method: Composition-based stats.
Identities = 51/426 (11%), Positives = 105/426 (24%), Gaps = 61/426 (14%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A N++++ + ++
Sbjct: 128 SCESYCAISKADNTNDKVLCPDCLRETTLLEEESYFFRLSAYEKPLLDFYAKNPEAILPV 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLNN 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFACARHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GN + ++ + + + L + +
Sbjct: 306 LGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNLLNRLL 365
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI-EVCKEH 400
L + ++ +H++ + + + A + + + +
Sbjct: 366 GMAKKYFNHSLKSAKITAYYSKELEKVHQILDNANSFVPKMQLHKALEELFNVYDFLNKF 425
Query: 401 LNKNIS 406
+ K
Sbjct: 426 IAKEEP 431
>gi|189030336|sp|Q2GDQ6|SYL_NEOSM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
Length = 831
Score = 43.5 bits (101), Expect = 0.078, Method: Composition-based stats.
Identities = 28/146 (19%), Positives = 44/146 (30%), Gaps = 17/146 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R ++ DVL R R V + I A E +I N
Sbjct: 43 HIGHLRNYVIGDVLARYKRSQGY--NVLH---------PIGWDAFGLPAEKAAINSNIHP 91
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
I T KN + + + +T + + G AY N+E+
Sbjct: 92 RIWTEKNIAKMRTSLKSIGLSYDWSRELSTCSPKYYEHEQKFFLAFLKAGLAYRKNSEVN 151
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRV 179
+D + + G V
Sbjct: 152 WDPIDKTVLANEQVIDGRGWRSGAVV 177
>gi|302340173|ref|YP_003805379.1| lysyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301637358|gb|ADK82785.1| lysyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 525
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 4/44 (9%)
Query: 28 MYVC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
+Y C G T HIGN R +I +++ R LR K V ++
Sbjct: 25 VYTCASGITPSGTVHIGNFREIISVELVVRALRERG--KKVRFI 66
>gi|289551711|ref|YP_003472615.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
gi|289181242|gb|ADC88487.1| Methionyl-tRNA synthetase [Staphylococcus lugdunensis HKU09-01]
Length = 657
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++L H + + + ++ G Y E +
Sbjct: 70 -EYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|159125043|gb|EDP50160.1| methionyl-tRNA synthetase, putative [Aspergillus fumigatus A1163]
Length = 574
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 50/160 (31%), Gaps = 10/160 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V H+G+ M++ D+L R R G+K + TD + + +
Sbjct: 64 VNAAPHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD-----EHGMKIQQAASAAGM 116
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
N + F H R T+ H + Y + + G+ Y A +E
Sbjct: 117 DPQAFCDMNCKTFQALAKAANV-DYNHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEG 175
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ S Y + + G ++ ++
Sbjct: 176 WYSVSDETFYPPTQVQNSLDPSTGRKIMVSVETGKEVEWS 215
>gi|119500964|ref|XP_001267239.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
gi|119415404|gb|EAW25342.1| methionine-tRNA synthetase [Neosartorya fischeri NRRL 181]
Length = 572
Score = 43.5 bits (101), Expect = 0.079, Method: Composition-based stats.
Identities = 53/327 (16%), Positives = 87/327 (26%), Gaps = 72/327 (22%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
H+G+ M++ D+L R R G+K + TD + + +
Sbjct: 65 APHVGHFYTMVITDILKRW-RVLLGDKDAQLLTG-TD-----EHGMKIQQAASAAGMDPQ 117
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEIIFD 155
N + F H R T+ H + Y + + G+ Y A +E +
Sbjct: 118 AFCDMNCKTFQALAKAANV-DYDHFIRTTDPAHKEAVQYFWEMLNHRGYIYTAKHEGWYS 176
Query: 156 TSSIPNYG------------------SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
S Y S K E T + L+K +
Sbjct: 177 VSDETFYPPTQVQNSLDPSTGRKRMVSVETGKEVEWSSETNYHFRLSAFQERLLELYKST 236
Query: 198 TPMEPG-----------------------WESPWGRGRPGWHIECSAMSSH--------- 225
+ PG WG PG + +
Sbjct: 237 EFVTPGNYMADLVKSVSSGLSDLSISRPVERLTWGIPVPGDETQTIYVWLDALINYLTKA 296
Query: 226 ----------YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
LG D+H G D++ H A D + +G +
Sbjct: 297 GYPFPPGQEGRLGWPADVHVIGKDIVRFHCVYWPAFLMALD--LPLPRRVLIHGHWTINR 354
Query: 276 RKMSKSNGNFITINELLETKKFGGRSW 302
KMSKS GN + ++ +
Sbjct: 355 EKMSKSTGNVVNPFFAIDRFGVDTMRF 381
>gi|254247500|ref|ZP_04940821.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
gi|124872276|gb|EAY63992.1| Methionyl-tRNA synthetase, class Ia [Burkholderia cenocepacia
PC184]
Length = 756
Score = 43.5 bits (101), Expect = 0.080, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 71 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 119
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 120 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSENIYLALQEAGLIAEREIEQA 178
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 179 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 225
>gi|312149302|gb|ADQ29373.1| lysyl-tRNA synthetase [Borrelia burgdorferi N40]
Length = 521
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 50/391 (12%), Positives = 102/391 (26%), Gaps = 54/391 (13%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ +A + + + K++E V ++ +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYNNHY 194
Query: 199 PMEPG---WESPWGRGRPGWHIECSAMSS---HYLGKVFDIHGGGLDLIFPHHENEIAQS 252
+E R W I+ + + D G D + +++
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWRIDWPMRWKYEKVDFEPAGKDHHSSGGSFDTSKN 254
Query: 253 CC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE---------------TKK 296
+ + G K+S S+G+ I++ ++LE
Sbjct: 255 IVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAATKPNT 314
Query: 297 FGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALY 356
S+ VI++ + E + + + S P+
Sbjct: 315 EFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKRIPYQ 371
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 372 IGFRHLSVICQIFE--NNINKILNYLKNVQE 400
>gi|257870964|ref|ZP_05650617.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
gi|257805128|gb|EEV33950.1| methionyl-tRNA synthetase [Enterococcus gallinarum EG2]
Length = 668
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A +
Sbjct: 21 HIGNSYTTIACDAVARYKRLMGFD--VFY---LTGVDEHGQKIEKKAEELGVD------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + Q ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEYFTE 138
>gi|224532370|ref|ZP_03673000.1| lysine--tRNA ligase [Borrelia burgdorferi WI91-23]
gi|224512677|gb|EEF83048.1| lysine--tRNA ligase [Borrelia burgdorferi WI91-23]
Length = 470
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPQNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPIVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVICQIFE--NNINKILNYLKNVQE 400
>gi|121534360|ref|ZP_01666184.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
gi|121307130|gb|EAX48048.1| methionyl-tRNA synthetase [Thermosinus carboxydivorans Nor1]
Length = 640
Score = 43.5 bits (101), Expect = 0.081, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 45/154 (29%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DRLHIGHAYCTTIADAIARYKRLAGYD--VFF---LTGSDEHGQKIERKAKEHGVT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
K F +L T H + + Q I G Y+
Sbjct: 68 --PIEYVDKIVASFKHLWEKLNISNDDFIRTTETRHKEVVQSIFQKIYDQGDIYKATYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + K + + ++
Sbjct: 126 QYCTPCETFWLERQLVDGKCPDCGRPVELVQEES 159
>gi|332686216|ref|YP_004455990.1| methionyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
gi|332370225|dbj|BAK21181.1| methionyl-tRNA synthetase [Melissococcus plutonius ATCC 35311]
Length = 671
Score = 43.1 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA + D + R R + V Y +T +D+ KI ++A + + +
Sbjct: 20 HIGNAYTTVACDAMARYKRLMGFD--VFY---LTGVDEHGQKIEKKAEE------LEISP 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ L H + + ++ G Y + +
Sbjct: 69 QTYVDQMANDIQDLWQTLDISYDKFIRTTDDYHKEAVQKIFDRLVEQGDIYLGEYQGWYS 128
Query: 156 TSSIPNYGS 164
S +
Sbjct: 129 VSDEEYFTE 137
>gi|154488118|ref|ZP_02029235.1| hypothetical protein BIFADO_01689 [Bifidobacterium adolescentis
L2-32]
gi|154083591|gb|EDN82636.1| hypothetical protein BIFADO_01689 [Bifidobacterium adolescentis
L2-32]
Length = 909
Score = 43.1 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 58 PTVSGHLHVGHVFSYTHTDVIARFKRMNGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 115
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ +QF L
Sbjct: 116 TSLKYDPNFVPPFEGTD-GKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLS 174
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 175 IDWSQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQT 220
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C A+ +H + + + G
Sbjct: 221 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACGALIAHPDDERYKQYFGQ 280
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H + A ++K A I + F ++ + +
Sbjct: 281 YVYSPLFHVKVPILAHKAAEMDKGAGIAMCCTFGDVTDVEWWR 323
>gi|78777988|ref|YP_394303.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
gi|109895052|sp|Q30PL3|SYR_SULDN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|78498528|gb|ABB45068.1| arginyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
Length = 527
Score = 43.1 bits (100), Expect = 0.082, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L+RL R+ + Y N
Sbjct: 110 PT--GPLHIGHARGAVYGDTLFRLARHLGYDITAEYYVN 146
>gi|229817095|ref|ZP_04447377.1| hypothetical protein BIFANG_02351 [Bifidobacterium angulatum DSM
20098]
gi|229784884|gb|EEP20998.1| hypothetical protein BIFANG_02351 [Bifidobacterium angulatum DSM
20098]
Length = 944
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 77/282 (27%), Gaps = 50/282 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 73 PTVSGHLHVGHVFSYTHTDVIARFKRMNGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 130
Query: 73 T----DID--------D--KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
T D D D KI + + + +T+++ +QF L
Sbjct: 131 TSLKYDPDFKPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLSI 190
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
Q T + H + + + + T
Sbjct: 191 DWSQTYHT--------------IGKHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTA 236
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V + + K + E G RP C A+ +H + + + G
Sbjct: 237 VAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACGALIAHPDDERYKQYFGQY 296
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H + A ++K A I + F ++ + +
Sbjct: 297 VYSPLFHVKVPILAHKAAEMDKGAGIAMCCTFGDVTDVEWWR 338
>gi|192291492|ref|YP_001992097.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
gi|192285241|gb|ACF01622.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris TIE-1]
Length = 514
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R K V + +T D+ K+I+ A++E +
Sbjct: 18 GAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGLKMIQTAQKEGLT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N +F + RL + H + + + + G Y +
Sbjct: 69 --PHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIYLDSYSG 126
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 127 WYSVRDEAYYAEDE 140
>gi|257867079|ref|ZP_05646732.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257873414|ref|ZP_05653067.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257877159|ref|ZP_05656812.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
gi|257801135|gb|EEV30065.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC30]
gi|257807578|gb|EEV36400.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC10]
gi|257811325|gb|EEV40145.1| methionyl-tRNA synthetase [Enterococcus casseliflavus EC20]
Length = 668
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A +
Sbjct: 21 HIGNSYTTIACDAVARYKRLMGFD--VFY---LTGVDEHGQKIEKKAEELGVD------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + Q ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWNTLDISYDKFIRTTDDYHKKAVQKIFQQLLDQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEYFTE 138
>gi|228993761|ref|ZP_04153666.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
gi|228765972|gb|EEM14621.1| Methionyl-tRNA synthetase 2 [Bacillus pseudomycoides DSM 12442]
Length = 543
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 51/167 (30%), Gaps = 20/167 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 18 HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEAN-NEII 153
I ++F + L + A +H + + ++ G Y+ +
Sbjct: 67 -KEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQAY 125
Query: 154 FDTSSIPNYGS--FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+T + + + +L K+
Sbjct: 126 CETCTQFLPDRYVEGGCPHCHEPARGDQCDACSAILDPLDLLEKKCK 172
>gi|188584685|ref|YP_001916230.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
gi|179349372|gb|ACB83642.1| methionyl-tRNA synthetase [Natranaerobius thermophilus JW/NM-WN-LF]
Length = 655
Score = 43.1 bits (100), Expect = 0.083, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 48/170 (28%), Gaps = 10/170 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R + + V +T D+ KI +A++ +
Sbjct: 18 DKLHIGHSYTTVAADCMARYKKLTGYD-----VMFLTGTDEHGQKIERKAKENGKNPQQF 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+++ ++ I T ++ + H+ + +
Sbjct: 73 VDEIVASIKELWTLLDIEYDDFIRTTEERHKSVVQKIFERFYEQGDIYKDQYEGWYCTPC 132
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
F + E + + AD +L E
Sbjct: 133 ESFWLERQLDEAKTCPDCAREVEWVKEESYFFKMSKYADRLLEHIENNPE 182
>gi|284928619|ref|YP_003421141.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
gi|284809078|gb|ADB94783.1| leucyl-tRNA synthetase [cyanobacterium UCYN-A]
Length = 868
Score = 43.1 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 33/221 (14%), Positives = 56/221 (25%), Gaps = 32/221 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R R V + D A E+ +I +
Sbjct: 59 HMGHVRNYVITDVIARFKRLQGY--SVLHPMG---WD------AFGLPAENAAIDRGISP 107
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
T KN + + L + T + +L G AY+ +
Sbjct: 108 EEWTKKNIAKMRQQLQSLGLSIDWEREITTCSPSYYKWTQWLFLQFYKVGLAYQKEATVN 167
Query: 154 FDTSSIPNYGSFSRRKIDEQK------------MGTRVPEKYHKKNPADFILWKRSTPME 201
+D + Y + D K
Sbjct: 168 WDPVDQTVLANEQVDTEGYSWRSGAKVEKKLLCQWFLKITDYAEYLLNDLNTLKGWPDSV 227
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ W G HI+ + K I D I+
Sbjct: 228 KLMQKNWIGKSLGAHIQFPVKDTK---KSISIFTTRPDTIY 265
>gi|210135200|ref|YP_002301639.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
gi|210133168|gb|ACJ08159.1| methionyl-tRNA synthetase [Helicobacter pylori P12]
Length = 650
Score = 43.1 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTNDKVLCPDCLRE 153
>gi|94986673|ref|YP_594606.1| arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
gi|123082175|sp|Q1MRU1|SYR_LAWIP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|94730922|emb|CAJ54285.1| Arginyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
Length = 550
Score = 43.1 bits (100), Expect = 0.084, Method: Composition-based stats.
Identities = 45/367 (12%), Positives = 88/367 (23%), Gaps = 25/367 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
PT HIG+ R + D L RLLR+ Y N D + + + I
Sbjct: 127 PT--GPLHIGHGRGAAIGDTLARLLRFTGYNVTTEYYIN--D------AGRQMQLLGLSI 176
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I ++ Q + P +I + N I
Sbjct: 177 WLRIKELSG--IQVTWPEEYYKGTYIIEIAKALLEEQPDIISYTDIDGEQASFHFGMNVI 234
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + ++ + + ++S
Sbjct: 235 LNGIKQDLKTFKVEHEEWFSERTLIKTNAIEQTLKALECTGLTFEKEGALWFQSTVFGDD 294
Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGL--------DLIFPHHENEIAQSCCADRIEKTANI 264
+ S S Y H D++ H IA+ A + +
Sbjct: 295 KDRVLRKSDKSLTYFALDIAYHYTKYNRGFDRIIDILGADHHGYIARIKAAMQAFGHDPM 354
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
+ L + T E R L+ +DF +
Sbjct: 355 TFDIILIQLVSLLENGIQVAMSTRAGQFEKLIDVINEVGVDAARFMFLLRKSDAHLDFDL 414
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ + + + + I + +DL I ++++ + D L +
Sbjct: 415 ELVKQRTMNNPVYYVQYAYARI---CSIIRKAHDLGFT--ITDVNEVPLSNITTKDELNL 469
Query: 385 FNASAHI 391
Sbjct: 470 LRLLDKF 476
>gi|315660343|ref|ZP_07913196.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
gi|315494632|gb|EFU82974.1| methionine--tRNA ligase [Staphylococcus lugdunensis M23590]
Length = 657
Score = 43.1 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++L H + + + ++ G Y E +
Sbjct: 70 -EYLDDMIAGIKSLWSKLEISNDDFIRTTEQRHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|150387962|ref|YP_001318011.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
gi|149947824|gb|ABR46352.1| methionyl-tRNA synthetase [Alkaliphilus metalliredigens QYMF]
Length = 655
Score = 43.1 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 49/416 (11%), Positives = 106/416 (25%), Gaps = 84/416 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPI--ND 94
HIG+ + DVL R R + V+ +T D +KI E A++ + ++
Sbjct: 20 HIGHTYTTVAADVLARFKRTRGYD-----VQFLTGTDEHGEKIQEAAQKNGMNPKAYVDE 74
Query: 95 AISIITS-------------KNTQQFVK--DTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
+ I + T + + L + + ++
Sbjct: 75 IVEEIKKVWKSMDISYDIFIRTTDEEHERAVQKIFQTLYEKGDIYKSEYEGWYCTPCESF 134
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-----YHKKNPADFILW 194
E + K+ + + + + ++ + +L
Sbjct: 135 WTETQLKEDKGCPDCGRPAHLAKEEAYFFKLSKYQDRLIEHFEKYPEICYPESRKNEMLN 194
Query: 195 KRSTP---------MEPGWESPWGR-----GRPGWHIECSAMS------------SHYLG 228
P W P + C+ ++ Y
Sbjct: 195 NFLRPGLEDLCVSRTTFDWGIPVPFDPKHVIYVWFDAVCNYITALGYTSENEEQYKKYW- 253
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
++H +++ H A + +G++ KMSKS GN +
Sbjct: 254 -PANVHLVAKEIVRFHTIIWPAILMAL--EVPLPKMVYGHGWILFGSDKMSKSKGNIVYP 310
Query: 289 NELLETKKFGGRS--------------WPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
L+E + + + + + + E
Sbjct: 311 EPLIERYGIDALKYFLLREFTFGQDGNYTNRTFVTRLNADLANDLGNLVSRTVAMIEKYN 370
Query: 335 SKWPQTSTSKGIIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
S G D + + L A++ + K+ R + K D
Sbjct: 371 SGIIPEPKVAGEFDEDLRTVATGAAAKVEKAIDQLQFHEALEEIWKVVRRTNKYID 426
>gi|119487032|ref|ZP_01620904.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
gi|119455961|gb|EAW37095.1| methionine--tRNA ligase [Lyngbya sp. PCC 8106]
Length = 534
Score = 43.1 bits (100), Expect = 0.085, Method: Composition-based stats.
Identities = 30/182 (16%), Positives = 54/182 (29%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + D + R R K V IT D+ KI A E +
Sbjct: 19 VNDVPHVGSAYTTMAADAVARFQRLQG--KSVLL---ITGTDEHGQKIERTA--ESLNRS 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I S + K + + T R H + + Y + +
Sbjct: 72 PQEHCDQIVSSFESLWHKLDIQYDRFSRTTDSR---HAAIVKEFFGRVWDQEDIYLSQQQ 128
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + T ++ + F L K +E ++
Sbjct: 129 GWYCVACEEFKEERELIDEKYCPIHTNKQVEWRDEQNYFFRLSKYQKQLEALYQEQPDFI 188
Query: 212 RP 213
+P
Sbjct: 189 QP 190
>gi|307265681|ref|ZP_07547234.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|326389218|ref|ZP_08210786.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
gi|306919325|gb|EFN49546.1| methionyl-tRNA synthetase [Thermoanaerobacter wiegelii Rt8.B1]
gi|325994581|gb|EGD53005.1| methionyl-tRNA synthetase [Thermoanaerobacter ethanolicus JW 200]
Length = 633
Score = 43.1 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 58/419 (13%), Positives = 108/419 (25%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI AR++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAREKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKDLWKTMDISNDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SEYEGWYCT 128
Query: 135 LIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ S ++ + + +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K S + G G+ +
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPRHVIYVWIDALSNYITALGYSTDHDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVRKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFEGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|212703468|ref|ZP_03311596.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
gi|212673082|gb|EEB33565.1| hypothetical protein DESPIG_01512 [Desulfovibrio piger ATCC 29098]
Length = 551
Score = 43.1 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 43/368 (11%), Positives = 78/368 (21%), Gaps = 26/368 (7%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
PT H+G+ R V D L RLLR + Y N D + + +
Sbjct: 127 PT--GPLHVGHGRGAAVGDSLARLLRKAGFDVETEYYIN--D------AGRQMRILGLSV 176
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + + R + +++ YE
Sbjct: 177 WLRVKELAGR---PVEWPEDYYRGSYIIDIAREMLAEDPSLPDMEDQAGQDRCYERAMNE 233
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG- 211
I D + + A W + G
Sbjct: 234 ILDGIKADLADFRVEHQHWFSEKTLVESGAVKAAFDALTEAGHTFDKDGAFWFATQALGD 293
Query: 212 RPGWHIECSAMSSHYLGKVFDIHGGGL--------DLIFPHHENEIAQSCCADRIEKTAN 263
+ S S Y H D+ H + + A
Sbjct: 294 DKDRVLRKSDGSLTYFASDIAYHHNKFQRGYDWLIDIWGADHHGYVPRMRAAITAMGKPR 353
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+ L + T ET + A R L +DF
Sbjct: 354 ESFDVVLIQLVNLLQGGKPVSMSTRAGTFETLADVVKEVGADAARFMFLSRKSDTSLDFD 413
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
++ + + + I + +A L + + +
Sbjct: 414 LELAKQRSLDNPVYYVQYAHARICAVLRRAEERGITLPAAATDELL----AALDTPEDMA 469
Query: 384 IFNASAHI 391
+ A
Sbjct: 470 LLRKMAGF 477
>gi|119026468|ref|YP_910313.1| valyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
gi|118766052|dbj|BAF40231.1| Valyl-tRNA synthetase [Bifidobacterium adolescentis ATCC 15703]
Length = 924
Score = 43.1 bits (100), Expect = 0.086, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 73 PTVSGHLHVGHVFSYTHTDVIARFKRMNGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 130
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ +QF L
Sbjct: 131 TSLKYDPNFVPPFEGTD-GKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLS 189
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 190 IDWSQTYHT--------------IGKHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQT 235
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C A+ +H + + + G
Sbjct: 236 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACGALIAHPDDERYKQYFGQ 295
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H + A ++K A I + F ++ + +
Sbjct: 296 YVYSPLFHVKVPILAHKAAEMDKGAGIAMCCTFGDVTDVEWWR 338
>gi|284048773|ref|YP_003399112.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
gi|283952994|gb|ADB47797.1| methionyl-tRNA synthetase [Acidaminococcus fermentans DSM 20731]
Length = 650
Score = 43.1 bits (100), Expect = 0.087, Method: Composition-based stats.
Identities = 25/129 (19%), Positives = 43/129 (33%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V+ IT D+ KI +A
Sbjct: 20 HIGHAYCTTIADTIARYKRANGFD-----VQFITGSDEHGLKIQRKAE------SFGVKP 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
T K F K L + ++ H + L+Q + G Y+ + E ++
Sbjct: 69 IEYTDKIVADFKKLWEMLGVSYTSFVRTSSPEHEKTVQTLLQKVWEQGDIYKKDYEGLYC 128
Query: 156 TSSIPNYGS 164
+
Sbjct: 129 VPCESFWTE 137
>gi|159040724|ref|YP_001539976.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
gi|187647711|sp|A8MA54|SYM_CALMQ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|157919559|gb|ABW00986.1| methionyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
Length = 582
Score = 43.1 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 26/178 (14%), Positives = 53/178 (29%), Gaps = 20/178 (11%)
Query: 22 DPSNIRMYVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
+ + +R V G P +Y H+GN ++ DV R L+ + V +V T D+
Sbjct: 11 NGNEVRW-VVGSAWPYIYAVPHLGNLIGSLLSADVFTRYLKLKGYD--VVFV---TGSDE 64
Query: 78 ---KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMI 133
I E +I + +T + + VK + + H +
Sbjct: 65 HGTPI------EVEAIKLGIEPRQLTDRMHEIIVKLLKLWGIEPDNYTRTESEVHKWYVR 118
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
I +G+ + ++E+ + +
Sbjct: 119 DAFTKIYNNGYIFTKDDELPYCPRDKIFLPDRFVIGTCPYCGYPYARGDQCENCGRLL 176
>gi|39935844|ref|NP_948120.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
gi|39649698|emb|CAE28219.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris CGA009]
Length = 514
Score = 43.1 bits (100), Expect = 0.088, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 46/134 (34%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R K V + +T D+ K+I+ A++E +
Sbjct: 18 GAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGLKMIQTAQKEGLT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N +F + RL + H + + + + G Y +
Sbjct: 69 --PHALATRNAGRFREMDDRLGVSYDRFIRTSEEQHHRSVQEVWKRMQDKGDIYLDSYSG 126
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 127 WYSVRDEAYYAEDE 140
>gi|315640002|ref|ZP_07895129.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
gi|315484264|gb|EFU74733.1| methionine--tRNA ligase [Enterococcus italicus DSM 15952]
Length = 669
Score = 43.1 bits (100), Expect = 0.089, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGNSYTTIACDAVARYKRLMGFD--VFY---LTGVDEHGQKIEKKADE------LGVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + Q ++ G Y E +
Sbjct: 70 QEYVDKMAADVQKLWKTLDISYDKFIRTTDDYHQKAVKKIFQQLLDQGDIYLGQYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 ISDEEYFTE 138
>gi|195941479|ref|ZP_03086861.1| lysyl-tRNA synthetase [Borrelia burgdorferi 80a]
gi|216264358|ref|ZP_03436350.1| lysyl-tRNA synthetase [Borrelia burgdorferi 156a]
gi|215980831|gb|EEC21638.1| lysyl-tRNA synthetase [Borrelia burgdorferi 156a]
Length = 521
Score = 43.1 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 48/395 (12%), Positives = 100/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ R + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSHKTSYARANEIEFEKYLPVVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E V + +
Sbjct: 135 YTSNAYASQIKFALDHKKELSEALNEYRTSKLEENWYPISVFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVICQIFE--NNINKILNYLKNVQE 400
>gi|88608152|ref|YP_506759.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
gi|88600321|gb|ABD45789.1| methionyl-tRNA synthetase [Neorickettsia sennetsu str. Miyayama]
Length = 503
Score = 43.1 bits (100), Expect = 0.090, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
V D HIG+A ++ DVL R LR E V +
Sbjct: 12 VNDNPHIGHAYSSLIADVLTRALRLAGHE--VRF 43
>gi|116690457|ref|YP_836080.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|162218052|ref|YP_621702.2| methionyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|187647708|sp|A0K9L0|SYM_BURCH RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|187649797|sp|Q1BUH6|SYM_BURCA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|116648546|gb|ABK09187.1| methionyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
Length = 718
Score = 43.1 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 187
>gi|312134269|ref|YP_004001607.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
gi|311774320|gb|ADQ03807.1| methionyl-tRNA synthetase [Caldicellulosiruptor owensensis OL]
Length = 653
Score = 43.1 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 38/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHVGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + + H + + + G Y+
Sbjct: 68 --PQEYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFSKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 126 WYCTPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|149184557|ref|ZP_01862875.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
gi|148831877|gb|EDL50310.1| methionyl-tRNA synthetase [Erythrobacter sp. SD-21]
Length = 519
Score = 43.1 bits (100), Expect = 0.091, Method: Composition-based stats.
Identities = 27/192 (14%), Positives = 55/192 (28%), Gaps = 17/192 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A + DV+ R R + V + T D+ K+ ++AR +
Sbjct: 18 PHIGHAYETVAADVIARFQRLMG--RDVRFQ---TGTDEHGLKMAQKAR------DLGKT 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHG--HAYEANNEI 152
+ + + F RL +H + + + +
Sbjct: 67 PRELADEMSGAFKDLFDRLDITYDRFIRTTDEDHHKASRAIWEAMEAKSDLYLDRYEGWY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + + E P ++ ++ F L K + P+ +P
Sbjct: 127 SVRDEAYYDEKELVEGEGGEMLSPQGTPVEWTEEETWFFRLSKYAEPLLELLNTPGFLEP 186
Query: 213 PGWHIECSAMSS 224
E A
Sbjct: 187 ASRRNEMIAFVE 198
>gi|328884156|emb|CCA57395.1| Methionine--tRNA ligase [Streptomyces venezuelae ATCC 10712]
Length = 521
Score = 43.1 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 15/97 (15%), Positives = 25/97 (25%), Gaps = 9/97 (9%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+ P + DVL R LR + V + D + E ++ +
Sbjct: 19 HIGHLAGPYVAADVLTRYLRAEG--EAVRFTTGTAD------HASSVEVRALRHHRKPEE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
+ D R +
Sbjct: 71 VAEGYRAAITADWLRSGVEFDHIVRPRRDKGYARWVQ 107
>gi|149917711|ref|ZP_01906207.1| lysyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
gi|149821493|gb|EDM80893.1| lysyl-tRNA synthetase [Plesiocystis pacifica SIR-1]
Length = 543
Score = 43.1 bits (100), Expect = 0.092, Method: Composition-based stats.
Identities = 15/40 (37%), Positives = 21/40 (52%), Gaps = 2/40 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE--KCVTYV 69
G T H+GN R +I D++ R LR GE K V ++
Sbjct: 34 GITPSGVVHVGNFREIITVDLVARALRDRLGEQGKKVRFI 73
>gi|307297529|ref|ZP_07577335.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
gi|306916789|gb|EFN47171.1| methionyl-tRNA synthetase [Thermotogales bacterium mesG1.Ag.4.2]
Length = 635
Score = 43.1 bits (100), Expect = 0.093, Method: Composition-based stats.
Identities = 28/184 (15%), Positives = 51/184 (27%), Gaps = 12/184 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A IV DV+ R R + V + +T D+ K++ A + +
Sbjct: 17 PHIGSAYSTIVADVIARYRRLSGYD--VFF---LTGTDEHGQKVLNEAIERNVE--AQKY 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K + + T + + ++ I D
Sbjct: 70 CDEMAEKFKALWKELELTNDAFVRTTDEYHMKTVQTFVSKLKENGDVYKGKYEGWYCIPD 129
Query: 156 TSSIPNYGSFSRRKIDEQ--KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ R E ++ E Y + + R P + P R
Sbjct: 130 ETFWNEEDLKEGRTCPECGREVKWVSEENYFFRLSKYNDILLRFYKENPQFVQPDFRRNE 189
Query: 214 GWHI 217
I
Sbjct: 190 MLRI 193
>gi|170733778|ref|YP_001765725.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|226710897|sp|B1JWS3|SYM_BURCC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|169817020|gb|ACA91603.1| methionyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 716
Score = 43.1 bits (100), Expect = 0.093, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYTTDSEENRVLSENIYLALQEAGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 187
>gi|124485549|ref|YP_001030165.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
gi|187647745|sp|A2SRE2|SYM_METLZ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|124363090|gb|ABN06898.1| methionyl-tRNA synthetase [Methanocorpusculum labreanum Z]
Length = 673
Score = 43.1 bits (100), Expect = 0.093, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
CG Y F H+G+ R I D R LR
Sbjct: 9 TCGL-PYTNGFCHLGHLRTYIPGDFYVRYLRRLG 41
>gi|325695003|gb|EGD36907.1| methionine--tRNA ligase [Streptococcus sanguinis SK150]
Length = 664
Score = 43.1 bits (100), Expect = 0.094, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGISPQAYVNG 74
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 75 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|78184679|ref|YP_377114.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|123729939|sp|Q3AXV7|SYL_SYNS9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|78168973|gb|ABB26070.1| leucyl-tRNA synthetase [Synechococcus sp. CC9902]
Length = 884
Score = 43.1 bits (100), Expect = 0.094, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 76 HMGHVRNYVITDVIARVQRMRG--DSVLHPMG---WD------AFGLPAENAAIERNIDP 124
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 125 GEWTDRNIDQMRNQLDRLGLSIDWDREQATCHSDYYR 161
>gi|172056076|ref|YP_001812536.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
gi|171988597|gb|ACB59519.1| methionyl-tRNA synthetase [Exiguobacterium sibiricum 255-15]
Length = 651
Score = 43.1 bits (100), Expect = 0.094, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 8/54 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI 90
HIG+A + D + R R + V Y +T D+ KI E+A++ S
Sbjct: 19 HIGHAYTTVAGDAMARYKRLQGFD--VRY---LTGTDEHGQKIQEKAKEAGVSE 67
>gi|121601643|ref|YP_989109.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
gi|120613820|gb|ABM44421.1| methionyl-tRNA synthetase [Bartonella bacilliformis KC583]
Length = 519
Score = 43.1 bits (100), Expect = 0.094, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 45/160 (28%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I D L R K V ++ TD + + + +N
Sbjct: 16 GAPHIGHAYNAIASDALARF--QRLDRKNVFFLSG-TD-----EHGLKMQKTAEALNITP 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +N+ F K T L C H + + + +G Y +
Sbjct: 68 QQLADRNSALFQKMLTALNCSNDDFIRTTEERHHQTCQVMWKKMEANGDIYLDRYAGWYS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + + + N + ++
Sbjct: 128 VRQESYYEQKDTEIRENGIRCEKELGSPVEWNEEESYFFR 167
>gi|325845442|ref|ZP_08168735.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
gi|325488548|gb|EGC90964.1| methionine--tRNA ligase [Turicibacter sp. HGF1]
Length = 655
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 47/175 (26%), Gaps = 20/175 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A++
Sbjct: 20 HIGTAYTTVASDAMARYKRSRGFD--VRF---LTGMDEHGQKIQEKAQEAGKEPQAYVDE 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+K + + + H + + + +G Y
Sbjct: 75 IADAAK---KLWEMMDITN--DDFIRTTEKRHEEMVEKIFAKFMENGDIYKGHYEGLYCT 129
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
S K + +V ++ K+ + +
Sbjct: 130 PCESYYTETQLVDGKCPDCGRDVKVVKEESYFFN-----MKKYADRLMEYYNANP 179
>gi|321250978|ref|XP_003191915.1| methionine-tRNA ligase [Cryptococcus gattii WM276]
gi|317458383|gb|ADV20128.1| Methionine-tRNA ligase, putative [Cryptococcus gattii WM276]
Length = 582
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 28/188 (14%), Positives = 53/188 (28%), Gaps = 20/188 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ +++ DVL R R ++ V + T D+ KI + A+
Sbjct: 62 VNASPHIGHLHSLLLTDVLARFSRLRCPQRKVVFA---TGTDEHGLKIQQAAKANGVGE- 117
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE-AN 149
+Q+F H+ + ++ G Y+ +
Sbjct: 118 -----QEFCDDVSQRFRNLAKLANASNTDFIRTTEPRHVKAVEQFWNTLVGSGDIYKGTH 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK----RSTPMEPGWE 205
+ + S ++ ++ KM WK + W
Sbjct: 173 SGWYSISDESFYAASQVTKRPEDGKMIAIETGNEVIWEEE--TNWKFRLGKHKEFLEKWL 230
Query: 206 SPWGRGRP 213
S P
Sbjct: 231 SQPESVHP 238
>gi|312138647|ref|YP_004005983.1| methionine-tRNA ligase metg [Rhodococcus equi 103S]
gi|311887986|emb|CBH47298.1| methionine-tRNA ligase MetG [Rhodococcus equi 103S]
Length = 528
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 28/183 (15%), Positives = 59/183 (32%), Gaps = 18/183 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R E V + +T D+ K+ + A +E +
Sbjct: 32 PHIGHAYEYISSDAIARFKRLDGFE--VFF---LTGTDEHGLKMQQTAAKEGVDV----- 81
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ F L +H+ + + ++ G Y +
Sbjct: 82 -RDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLDTYSGWY 140
Query: 155 DTSSIPNYGSFSRRKIDE---QKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ +++ T P ++ +++ F L K + +E
Sbjct: 141 SVRDEAFHAEEETTVLEDGTRIATETGTPVEWTEESNYTFRLSKYQDRLLAHYEENPDFI 200
Query: 212 RPG 214
P
Sbjct: 201 APA 203
>gi|297526914|ref|YP_003668938.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255830|gb|ADI32039.1| methionyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 500
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 47/162 (29%), Gaps = 16/162 (9%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN- 93
HIG+A + DV+ R + V + IT D+ K+ A ++
Sbjct: 17 PPHIGHAYTTVFADVMARY--HRLVGDEVFF---ITGNDEHGLKLQRVAEKKGIHPKQFV 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
D ++ + K + + Q +Y I +A
Sbjct: 72 DEMADVYRKYWGMLDISYDYFIRTTDEYHEKTVKTAIQKLYDKGLIYKASYA----GWYC 127
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
D + G + K + +K + + +K
Sbjct: 128 VDCEKFYSPGE---YVEIDGKPYCPIHKKPLEWLEEETYYFK 166
>gi|261204906|ref|XP_002627190.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239592249|gb|EEQ74830.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis SLH14081]
gi|239611595|gb|EEQ88582.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ER-3]
gi|327348391|gb|EGE77248.1| methionyl-tRNA synthetase [Ajellomyces dermatitidis ATCC 18188]
Length = 580
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 29/140 (20%), Positives = 45/140 (32%), Gaps = 28/140 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI------DD---KIIERARQ 85
V H+G+ MIV DVL R TD D+ KI + A
Sbjct: 64 VNAAPHVGHLYTMIVADVLKRWQILLGN----------TDAKLLTGTDEHGLKIQQAAAA 113
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHG 143
+ + +T K+ R + H R T+ H + Y + G
Sbjct: 114 LGMTPQELCDQNCLT-------FKNLARKGNVEYDHFIRTTDAEHKEAVRYFWDMLNHRG 166
Query: 144 HAYEANNEIIFDTSSIPNYG 163
+ Y + +E + S Y
Sbjct: 167 YIYTSKHEGWYSVSDEAFYP 186
>gi|300727443|ref|ZP_07060852.1| methionine--tRNA ligase [Prevotella bryantii B14]
gi|299775323|gb|EFI71922.1| methionine--tRNA ligase [Prevotella bryantii B14]
Length = 691
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 45/163 (27%), Gaps = 26/163 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR +K V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KKDVIFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + + R T H + + G E +
Sbjct: 72 ----PQDVCDRYHKIIKESFEEFGIS-FDIYSRTTSETHNKLASDFFKKLYDEGKLIEKD 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
++ +D + + +K +D
Sbjct: 127 SDQYYDEEAHQFLADRYIMGECPHCHNPKAYGDQCEKCGSDLS 169
>gi|268325386|emb|CBH38974.1| arginyl-tRNA synthetase, N-terminus [uncultured archaeon]
Length = 507
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ DVL R+L+ + Y N
Sbjct: 123 HIGHLRNAIIGDVLARVLKRAGFDVETQYYVN 154
>gi|268323984|emb|CBH37572.1| arginyl-tRNA synthetase [uncultured archaeon]
Length = 558
Score = 43.1 bits (100), Expect = 0.099, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ DVL R+L+ + Y N
Sbjct: 123 HIGHLRNAIIGDVLARVLKRAGFDVETQYYVN 154
>gi|325676285|ref|ZP_08155964.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
gi|325552846|gb|EGD22529.1| methionine--tRNA ligase [Rhodococcus equi ATCC 33707]
Length = 528
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 27/183 (14%), Positives = 59/183 (32%), Gaps = 18/183 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + +T D+ K+ + A +E +
Sbjct: 32 PHIGHAYEYISSDAIARFKRLDGFD--VFF---LTGTDEHGLKMQQTAAKEGVDV----- 81
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ F L +H+ + + ++ G Y +
Sbjct: 82 -RDLATRNSDVFQAMDKALNISYDRFIRTTDADHLEASKAIWERMVAAGDIYLDTYSGWY 140
Query: 155 DTSSIPNYGSFSRRKIDEQK---MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ +++ T P ++ +++ F L K + +E
Sbjct: 141 SVRDEAFHAEEETTVLEDGTRLATETGTPVEWTEESNYTFRLSKYQDRLLAHYEENPDFI 200
Query: 212 RPG 214
P
Sbjct: 201 APA 203
>gi|194476532|ref|YP_002048711.1| methionine--tRNA ligase [Paulinella chromatophora]
gi|171191539|gb|ACB42501.1| methionine--tRNA ligase [Paulinella chromatophora]
Length = 524
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 13/170 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + D L R R K V + IT D+ KI A E S+
Sbjct: 12 VNDRPHLGSAYTTLACDALARYQRLIG--KSVVF---ITGCDEHGQKIQRTA--EAASLK 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
++ + ++ + + + + H + + G E +
Sbjct: 65 PQESCNQVSEEYHHLW---SRWQISNDRFIRTTDLRHQAIVKEFFLRVEKAGDILEGQQQ 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + D Q + ++ + F L + +E
Sbjct: 122 GWYCVACEEFKDEPVDAEGDNQCAIHQRRLEWRDEPNLFFNLSRYQKQIE 171
>gi|15897480|ref|NP_342085.1| methionyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284174797|ref|ZP_06388766.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|25009409|sp|Q9UWW2|SYM_SULSO RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|6015914|emb|CAB57741.1| methionyl-trna synthetase [Sulfolobus solfataricus P2]
gi|13813723|gb|AAK40875.1| Methionyl-tRNA synthetase (metS) [Sulfolobus solfataricus P2]
gi|261602240|gb|ACX91843.1| methionyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 573
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 29/235 (12%), Positives = 66/235 (28%), Gaps = 24/235 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 10 PYVNSVPHLGNLIGSILSADVFARYARLRYGKENVLFVSG-----------SDEHGTPIE 58
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + I + + L +
Sbjct: 59 IEAIKRKVNPKELTDQAHEYDRHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYIK 118
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 119 VSEDEIPYCENDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 178
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
+P + W + S + G P + +A S + ++
Sbjct: 179 TPVFKKTKHWFFDLSEFNDKIRG------WISSSNEMPDNVKSVALSWVGEGLKP 227
>gi|300870561|ref|YP_003785432.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
gi|300688260|gb|ADK30931.1| methionyl-tRNA synthetase [Brachyspira pilosicoli 95/1000]
Length = 649
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 22/112 (19%), Positives = 41/112 (36%), Gaps = 9/112 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI-PI 92
D+ HIG+ I D + R + + V + +T D +KI +A + +
Sbjct: 17 DYLHIGHCYCTIATDTMARYKKIMGYD--VYF---LTGTDEHGEKIQRKAEEAKTTPKEY 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
D I T K ++ D + + R +I + +Y I +
Sbjct: 72 VDNIVDATKKLWKRLHIDYSHYIRTTDDYHERRVQNIFKQLYDKGYIYKGSY 123
>gi|187922292|ref|YP_001893934.1| methionyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187713486|gb|ACD14710.1| Methionine--tRNA ligase [Burkholderia phytofirmans PsJN]
Length = 531
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 25/215 (11%), Positives = 58/215 (26%), Gaps = 30/215 (13%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPS 89
PT H+G+ A P + D+L R LR +VR ++ +D D +
Sbjct: 5 PTPNGRLHLGHIAGPYLRMDMLCRYLRSQG-----HHVRVVSAVDGFD-----SYVLWKG 54
Query: 90 IPINDAISIITSKNTQQFVK-----DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + Q + D L A +H ++ ++ GH
Sbjct: 55 LQETRPPEEVCRDYHAQIARDLAALDIEVDDFLDLVQGSHAPSHANTARRAVEMLVASGH 114
Query: 145 AYEANNEIIFDTSS-------IPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++++ ++ + ++ +
Sbjct: 115 TDTIVEKVLYSRATGRYLVGAWLTGQCPQCEAPAAGYFCEACGAHFRPESMLNPGPRMGD 174
Query: 198 TPMEPGWESPWGRGRPG-----WHIECSAMSSHYL 227
+E P ++C+ ++
Sbjct: 175 ADLEWRETENIFLRVPDEAELLRRLQCAGAPEKFI 209
>gi|168213447|ref|ZP_02639072.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|170714987|gb|EDT27169.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
Length = 514
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG I D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWIAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|317014423|gb|ADU81859.1| methionyl-tRNA synthetase [Helicobacter pylori Gambia94/24]
Length = 650
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRE 153
>gi|152980718|ref|YP_001354586.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
gi|166231615|sp|A6T239|SYL_JANMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|151280795|gb|ABR89205.1| leucyl-tRNA synthetase [Janthinobacterium sp. Marseille]
Length = 881
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 52/197 (26%), Gaps = 18/197 (9%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
Y C Y H+G+ R + DV+YR LR V D E
Sbjct: 42 YACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMPAE 93
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHG 143
+ ++ N + T N + + + ++ ++ G
Sbjct: 94 NAAMANNVPPAQWTYANIDYMKTQMASMGLAIDWSREMTACRPEYYKWNQWMFLKMLEKG 153
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRST 198
Y+ + +D + + G + ++ A L
Sbjct: 154 IIYKKTGTVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPMYYARITDYAEELLDHVD 213
Query: 199 PMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 214 NKLPGWPERVRIMQSNW 230
>gi|212715391|ref|ZP_03323519.1| hypothetical protein BIFCAT_00286 [Bifidobacterium catenulatum DSM
16992]
gi|212661697|gb|EEB22272.1| hypothetical protein BIFCAT_00286 [Bifidobacterium catenulatum DSM
16992]
Length = 910
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 41/283 (14%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 58 PTVSGHLHVGHVFSYTHTDVIARFKRMNGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 115
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ +QF L
Sbjct: 116 TSLKYDPNFVPPFEGTD-GKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLS 174
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 175 IDWTQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQT 220
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C A+ +H + + + G
Sbjct: 221 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACGALIAHPDDERYKQYFGQ 280
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H + A ++K A I + F ++ + +
Sbjct: 281 YVYSPLFHVKVPILAHKAAEMDKGAGIAMCCTFGDVTDVEWWR 323
>gi|203284557|ref|YP_002222297.1| lysyl-tRNA synthetase [Borrelia duttonii Ly]
gi|201084000|gb|ACH93591.1| lysyl-tRNA synthetase [Borrelia duttonii Ly]
Length = 532
Score = 43.1 bits (100), Expect = 0.10, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 86/360 (23%), Gaps = 62/360 (17%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV---------------------- 69
G T HIGN R +I D++ R L+ K V ++
Sbjct: 40 GITPSGTVHIGNFREVISVDLVARALQDQG--KQVRFIYSWDNYDVFRKVPKNMPDQELL 97
Query: 70 -----RNITDI-DDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ IT + D K + AR + I + Q +K +
Sbjct: 98 TTYLRQAITRVPDTKTNKSSYARANEIEFEQHLPTVGIEPEFIDQSLKYMSSD------- 150
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
I I+ + ++ S + I +
Sbjct: 151 YANQIKFALDHKDEIATILNKYRTTQLADDWYP-ISIFCTKCNRDTTTIKNYNHCYSIEY 209
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
N L K P W W +++ GK GG D
Sbjct: 210 YCECGNKESLDLRKTWACKLP-WRIDWPMRWKYENVD-----FEPAGKDHHSSGGSFD-- 261
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
+ + G K+S S+G+ +++ ++LE
Sbjct: 262 ------TAKEIVKIFGGTPPITFQYDFISIKGHGGKISSSSGDVVSLKDVLEI------- 308
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL-TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ V R T + + K+ + I
Sbjct: 309 YTPEVTRFLFASTKPNTEFSISFDLDVIKIYEDYDKFERVYYGIDEIQEKKKETFKRIYE 368
>gi|269967339|ref|ZP_06181400.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
gi|269828047|gb|EEZ82320.1| methionyl-tRNA synthetase [Vibrio alginolyticus 40B]
Length = 691
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + ++ ++ I + +G
Sbjct: 77 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 251
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + A + Y + +
Sbjct: 252 KNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLFW- 310
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 311 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAK 367
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427
Query: 428 --ADYI 431
AD I
Sbjct: 428 AAADRI 433
>gi|169825668|ref|YP_001695826.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
gi|168990156|gb|ACA37696.1| Methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
Length = 663
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 15/150 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A + D +
Sbjct: 27 HIGTAYTTVASDAIARYKRLRGYD--VRF---LTGMDEHGQKIQEKAAEAGKHPQ--DYV 79
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--ANNEIIF 154
+ I + + Q H + + Q + +G Y+
Sbjct: 80 NEIAESAKKLW---ALMDITYDDFIQTTQERHTKAVEKIFQKFLDNGDIYKGEYEGWYCT 136
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 137 PCESFFTETQLVDGNCPDCGRPVHKVKEES 166
>gi|52078533|ref|YP_077324.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|52783895|ref|YP_089724.1| methionyl-tRNA synthetase [Bacillus licheniformis ATCC 14580]
gi|319648562|ref|ZP_08002776.1| MetS protein [Bacillus sp. BT1B_CT2]
gi|52001744|gb|AAU21686.1| methionyl-tRNA synthetase MetS [Bacillus licheniformis ATCC 14580]
gi|52346397|gb|AAU39031.1| MetS [Bacillus licheniformis ATCC 14580]
gi|317389329|gb|EFV70142.1| MetS protein [Bacillus sp. BT1B_CT2]
Length = 662
Score = 43.1 bits (100), Expect = 0.11, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 42/129 (32%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI + A +E N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD--VRY---LTGTDEHGQKIQQTAEKE------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + + + +L H + + Q ++ +G Y E +
Sbjct: 71 QELVDRAAEDIQQLWKKLDISNDDFIRTTEERHKKVIEKVFQKLLDNGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 IPDETFYTE 139
>gi|260435959|ref|ZP_05789929.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260413833|gb|EEX07129.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 875
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 67 HMGHVRNYVITDVIARVQRMRG--HAVLHPMG---WD------AFGLPAENAAIERNVDP 115
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 116 GEWTDRNIDQMRAQLDRLGLSIDWSREQATCHNSYYR 152
>gi|242808514|ref|XP_002485180.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
gi|218715805|gb|EED15227.1| methionyl-tRNA synthetase, putative [Talaromyces stipitatus ATCC
10500]
Length = 578
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ DV+ R + + + +T D+ KI + A++
Sbjct: 62 VNAAPHVGHLYSMVLGDVIKRWEQLKGNKDAIF----LTGTDEHGIKIQQAAQEAGMDTQ 117
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ + KD R A ++ H R T+ H + Y + + G+ Y
Sbjct: 118 AFCDMN-------CKTFKDLARAANISNDHFIRTTDEAHKDAVRYFWEMLQHRGYIYTKK 170
Query: 150 NEIIFDTSSIPNYGS 164
+E + S Y
Sbjct: 171 HEGWYSVSDEAFYPQ 185
>gi|91977188|ref|YP_569847.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
gi|91683644|gb|ABE39946.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisB5]
Length = 514
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R K V + +T D+ K+I+ A++E +
Sbjct: 18 GAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGLKMIQTAQKEGIETHV- 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N +F R + H + + + + +G Y +
Sbjct: 72 -----LAARNAGRFRDMDDRFGVSYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAG 126
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 127 WYSVRDEAYYAEDE 140
>gi|116198129|ref|XP_001224876.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
gi|88178499|gb|EAQ85967.1| hypothetical protein CHGG_07220 [Chaetomium globosum CBS 148.51]
Length = 797
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 44/300 (14%), Positives = 72/300 (24%), Gaps = 49/300 (16%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ M++ DV R K +V T D+ K+ + A
Sbjct: 58 PHIGHMYSMVLADVFKRWQTLIG--KKAFFV---TGTDEHGMKVQQAAAL--ADKEPKQL 110
Query: 96 ISIITSKNTQ---QFVKDTTRLACLAPTHQPRATNHI--------PQMIYLIQNIILHGH 144
K + D R +A H + +
Sbjct: 111 CDENAEKFEELARMARIDYDRFMRTTDRDHVQAVEHFWSSSTRKPFTGAVYMASAETKNK 170
Query: 145 AYEANNEIIF----DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+ + E + K + D + + +
Sbjct: 171 VEWVEEKNYCFRMTELKDRLLDFYEKNPGWIEPASRMNEVVDWVKNHFEDLSISRPVQRL 230
Query: 201 EPGWESPWGR------------------GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIF 242
G P G P W + SH G D+H G D++
Sbjct: 231 SWGIRVPEDPSQTIYVWVDALINYITAAGFPDW----TPGESHKGGWPADVHVIGKDILR 286
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
H A D + + L +KMSKS GN + + +
Sbjct: 287 FHCVYWPALLMALD--IPLPKKVLVHSHWTLNNKKMSKSVGNVVNPLYAMNRWGVDATRY 344
>gi|258404453|ref|YP_003197195.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
gi|257796680|gb|ACV67617.1| methionyl-tRNA synthetase [Desulfohalobium retbaense DSM 5692]
Length = 648
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 54/184 (29%), Gaps = 22/184 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D + R R E +T D DKI++ A
Sbjct: 13 VNANPHLGHAYTTIVADCVNRFHRLLGQETFF-----LTGTDEHGDKIVQAAEDAG---- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ + + +F + L ++H + +Q + +G Y
Sbjct: 64 --QSPQEYVDRISSKFQQQLPDLNISNDRFIRTTDSDHKDCVQRFLQQVYDNGDIYFGEY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ Y + + + + + F ++ W + +
Sbjct: 122 GGYYCFGCERFYTEKE---LVDGLCPDHLKPPKYIEEKNYFFRMQKYQD----WLVQYIQ 174
Query: 211 GRPG 214
PG
Sbjct: 175 DNPG 178
>gi|168488458|ref|ZP_02712657.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|183573094|gb|EDT93622.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|332073087|gb|EGI83566.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
Length = 665
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQVYVDR 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDCLVEFFKAHPEF 191
>gi|317009649|gb|ADU80229.1| methionyl-tRNA synthetase [Helicobacter pylori India7]
Length = 650
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 42/152 (27%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S ++ + +
Sbjct: 122 SGYYCVSCESYCAISKTDNTSDKVLCPDCLRE 153
>gi|305663610|ref|YP_003859898.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
gi|304378179|gb|ADM28018.1| leucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
Length = 979
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 20/126 (15%), Positives = 31/126 (24%), Gaps = 17/126 (13%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKIIERA 83
MY HIG+ R ++ D++ R R V + T II A
Sbjct: 45 MY-----PNGPIHIGHGRTYLIADIIARFKRLQGY--NVLFPMGFHYTGT----PIIAMA 93
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
E S D I + + L + +Y +
Sbjct: 94 --EAISEGDKDLIELFRDTYGVPSDEIDRMKDPLYLARYFHRVSKDVMKLYGLSIDWRRE 151
Query: 144 HAYEAN 149
Sbjct: 152 FTTIDP 157
>gi|315586930|gb|ADU41311.1| methionine--tRNA ligase [Helicobacter pylori 35A]
Length = 650
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 44/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISTIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S + +++ + +
Sbjct: 122 SGYYCVSCESYCAASKMDNTNDKVLCPDCLRE 153
>gi|218883858|ref|YP_002428240.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218765474|gb|ACL10873.1| methionyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 498
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 27/162 (16%), Positives = 45/162 (27%), Gaps = 16/162 (9%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIND 94
HIG+A + DVL R R G V + +T D+ KI + +
Sbjct: 11 PPHIGHAYTTVFADVLARFHRLTGG--KVFF---LTGNDEHGLKI------QRVAEKAGK 59
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
+ + + L H + I G Y+A +
Sbjct: 60 HPKEYVDEMANLYREYWRILNISYDYFIRTTDPYHEKAVKEAFNYIYGKGLIYKAKYSGM 119
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ Y S E K + K + + +K
Sbjct: 120 Y-CVDCEKYYSPGEYTEVEGKPYCPIHNKPLEYLEEETYYFK 160
>gi|187251862|ref|YP_001876344.1| methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
gi|186972022|gb|ACC99007.1| Methionyl-tRNA synthetase [Elusimicrobium minutum Pei191]
Length = 500
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 27/184 (14%), Positives = 56/184 (30%), Gaps = 19/184 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIP 91
V + HIG++ + D++ R R E V ++ TD I+ IE+A ++
Sbjct: 14 VNAYPHIGHSYTTLACDIVSRYKRSRGEE--VHFLTG-TDEHGIN---IEKAAEK----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN- 149
+ + + + L H + + + +I G Y +
Sbjct: 63 AGMSPKAWCDQVVDAYKELWKILDIKYDDFIRTTDKRHEETVQQIFEILIAKGDIYLGHY 122
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + ++ + + I K L K + +ES
Sbjct: 123 SGMYCNSCEAYMDETEAPEGICPIHKKPLTEVKEETYFFK---LSKYQDALLKFYESNPS 179
Query: 210 RGRP 213
P
Sbjct: 180 FLNP 183
>gi|254525465|ref|ZP_05137517.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
gi|221536889|gb|EEE39342.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9202]
Length = 514
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 24/183 (13%), Positives = 45/183 (24%), Gaps = 19/183 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I+ D + R R + V + IT +D+ KI A ++
Sbjct: 12 VNDKPHLGSVYTTIICDSIARYKRLAGED--VIF---ITGVDEHGLKIQRTANEKGIE-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
++ F + ++ NH + + + Y
Sbjct: 65 ----PKSHCDAISKVFNNNWKDWNISFDKFIRTSSKNHEFVVNEFYKRVKASDDIYMGVQ 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP--MEPGWES 206
+ S + K EP +
Sbjct: 121 KGWYCVGCEEFKDNPENSSTYKCPIHQKNLEWKNEENLFFRLSKYQKEIEKIINEPSFIE 180
Query: 207 PWG 209
P
Sbjct: 181 PIE 183
>gi|160916068|ref|ZP_02078275.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
gi|158431792|gb|EDP10081.1| hypothetical protein EUBDOL_02095 [Eubacterium dolichum DSM 3991]
Length = 651
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 57/420 (13%), Positives = 105/420 (25%), Gaps = 85/420 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI-PI 92
HIGN +++ D + R R + V + T D+ KI E+A++ +
Sbjct: 20 GRPHIGNTYEIVLTDAIARYKRQQGYD--VFFQ---TGTDEHGQKIEEKAKEAGITPKEF 74
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
D I+ I KN + + L + ++ YE
Sbjct: 75 VDNIAGIVRKNFDMMNTSYDYFVRTTDDYHEKQV--QKIFKKLYEQGDIYKSTYEGMYCT 132
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP----- 207
++ + + + + E Y P + P
Sbjct: 133 PCESFWTESQLVDGKCPDCGRPVKKATEEAYFFNLQKYSPRLIEHIETHPEFIQPESRKN 192
Query: 208 ---WGRGRPGWHIECSAMSSHYLGKVF--------------------------------- 231
+PG C + +S G
Sbjct: 193 EMINNFLKPGLQDLCVSRTSFKWGIPVDFDPDHVVYVWIDALSNYITSLGFDVDGNHGEN 252
Query: 232 -------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H E + +L + KMSKS GN
Sbjct: 253 YKKYWPADVHIIGKDILRFHTIYWPIMLMALG--EPLPKQVFGHPWLLVGDGKMSKSKGN 310
Query: 285 FITINELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
I +EL+ + I +++ + + L I +
Sbjct: 311 AIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLMVERVNSDLANVLGNLVNRTISMQ 370
Query: 336 KWPQTSTSKGIID---------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
++ + + L AI + L + K D
Sbjct: 371 NKYFHGVISNPMEGDPLDAELIELAVATVHNVDEKMDQLRVGEAIDEIFTLLKRCNKYID 430
>gi|15897507|ref|NP_342112.1| leucyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|284174825|ref|ZP_06388794.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|14916942|sp|O33768|SYL2_SULSO RecName: Full=Leucyl-tRNA synthetase 2; AltName:
Full=Leucine--tRNA ligase 2; Short=LeuRS 2
gi|6015883|emb|CAB57710.1| isoleucyl-trna synthetase [Sulfolobus solfataricus P2]
gi|13813756|gb|AAK40902.1| Leucyl-tRNA synthetase (leuS-2) [Sulfolobus solfataricus P2]
gi|261602268|gb|ACX91871.1| leucyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 944
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|332707288|ref|ZP_08427341.1| methionyl-tRNA synthetase [Lyngbya majuscula 3L]
gi|332354022|gb|EGJ33509.1| methionyl-tRNA synthetase [Lyngbya majuscula 3L]
Length = 530
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 28/182 (15%), Positives = 54/182 (29%), Gaps = 13/182 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D + R R + + IT D+ KI A +
Sbjct: 20 VNDLPHIGSAYTTMASDAVARFQRLRGKDVLL-----ITGTDEHGQKIQRTAETQGVDPQ 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I + + K + + AT H + + +G Y + +
Sbjct: 75 --VHCDKIAAGFDVLWQKLNIQY---DRFSRTTATRHQAIVKEFFMRVWDNGDIYLSQQQ 129
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ S + + ++ + F L K +E ++
Sbjct: 130 GWYCVSCEEFKEQRELLAGNRCSIHPNQEAEWRDEQNYFFRLSKYQKQLEELYQQRPDFI 189
Query: 212 RP 213
+P
Sbjct: 190 QP 191
>gi|284036390|ref|YP_003386320.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
gi|283815683|gb|ADB37521.1| methionyl-tRNA synthetase [Spirosoma linguale DSM 74]
Length = 682
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 23/108 (21%), Positives = 38/108 (35%), Gaps = 21/108 (19%)
Query: 28 MYVCGPTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERA 83
+Y GP HIG+ A + D+ R LR K V ++ TD + I +A
Sbjct: 15 IYANGP-----IHIGHIAGCYLPADIYVRYLRSTG--KDVAFISG-TDEHGV--PITIKA 64
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
++E + + K Q + + R +N I
Sbjct: 65 KKEGIT------PQEVVDKYYGQIKQAFSDFGIS-FDIYSRTSNAIHH 105
>gi|226355830|ref|YP_002785570.1| methionine--tRNA ligase [Deinococcus deserti VCD115]
gi|226317820|gb|ACO45816.1| putative Methionine--tRNA ligase (Methionyl-tRNA synthetase)
(MetRS) [Deinococcus deserti VCD115]
Length = 668
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 17/58 (29%), Positives = 26/58 (44%), Gaps = 6/58 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIPI 92
HIG+ I+ D + R R K VT+V TD + +KI + A +E +
Sbjct: 18 GAPHIGHVYEKILADAIVRYQRLAG--KNVTFVMG-TD-EHGEKISKAAAKEGLTPQA 71
>gi|221135841|ref|XP_002164854.1| PREDICTED: similar to methionyl-tRNA synthetase, partial [Hydra
magnipapillata]
Length = 243
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 27/166 (16%), Positives = 47/166 (28%), Gaps = 23/166 (13%)
Query: 28 MYVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERA 83
+Y GP HIG+ I D+ R LR + V ++ TD + I +A
Sbjct: 15 IYANGP-----IHIGHLAGCYIPADIYVRYLRSKGAD--VAFISG-TDEHGV--PITVKA 64
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIIL 141
R+E + + +Q + R +H + +
Sbjct: 65 RKEGKT------PQQVVDFYYEQIKQSFADFGIS-FDIYSRTSNQSHHKVSQEIFTTLYD 117
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
G+ E +E FD + +K
Sbjct: 118 KGYFDEETSEQYFDEVAQQFLADRYIVGECPVCGNPNAYGDQCEKC 163
>gi|91227376|ref|ZP_01261765.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
gi|91188640|gb|EAS74930.1| methionyl-tRNA synthetase [Vibrio alginolyticus 12G01]
Length = 679
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 12 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 64
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + ++ ++ I + +G
Sbjct: 65 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 119
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 120 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 179
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 180 DSEHFFFDLPQFESMLKEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 239
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + A + Y + +
Sbjct: 240 KNKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLFW- 298
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 299 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAK 355
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 356 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 415
Query: 428 --ADYI 431
AD I
Sbjct: 416 AAADRI 421
>gi|325182837|emb|CCA17292.1| methionyltRNA synthetase of possible bacterial origi (ISS) putative
[Albugo laibachii Nc14]
Length = 741
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 26/179 (14%), Positives = 58/179 (32%), Gaps = 15/179 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+A + DV+ R + + V + +T D+ KI + A + A
Sbjct: 64 PHMGHAYENVTADVIARY--HRIFGRNVYF---LTGTDEHGQKIAQTAEA------LGIA 112
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANNEIIF 154
+ K F + T L + + + Q + G Y E +
Sbjct: 113 PKELCDKYAAIFRQLTLDLNMSNSSFIRTTSEKHKVFAQWLFQRALNKGDIYLGTYEGWY 172
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
+ ++ + + + +P K ++ F + K + + + +P
Sbjct: 173 NVREEVFVTEVEAQQSEYKDPVSGIPLKKMREESYFFRMSKYQQRLVDHFHAHPEFLQP 231
>gi|217032293|ref|ZP_03437790.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
gi|298735963|ref|YP_003728488.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
gi|216946059|gb|EEC24672.1| hypothetical protein HPB128_142g41 [Helicobacter pylori B128]
gi|298355152|emb|CBI66024.1| methionyl-tRNA synthetase [Helicobacter pylori B8]
Length = 650
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 57/442 (12%), Positives = 108/442 (24%), Gaps = 70/442 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR + S
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLRNQSPK 67
Query: 92 I-NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----------------HIPQMIY 134
D+IS I F D + + +
Sbjct: 68 AYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAYSGYYCV 127
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH---------- 184
++ A +++++ + + ++
Sbjct: 128 SCESYCAISKADNTSDKVLCPDCLRETALLEEESYFFKLSAYEKPLLDFYAKNPEAILPI 187
Query: 185 --------KKNPADFILWKRSTPMEPGWESPWGRGRPGWHI---------------ECSA 221
L T E G P P + +
Sbjct: 188 YRKNEVTSFIEQGLLDLSITRTSFEWGIPLPKKMNDPKHVVYVWLDALLNYASALGYLND 247
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
+ + H G D++ H A + +G+ +EG KMSKS
Sbjct: 248 LDNKMAHFECTRHIVGKDILRFHAIYWPAFLMSLN--LPLFKQLCVHGWWTIEGVKMSKS 305
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS 341
GN + ++ + + + L + +
Sbjct: 306 LGNVLDAQKIAMEYGIEELRYFLLREVPFGQDGDFSKKALIERINANLNNDLGNLLNRLL 365
Query: 342 TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK------NHDLLPIFNASAHILGIE 395
L + ++ H++ + H L L
Sbjct: 366 GMAKKYFNYSLKSAKITAYYSKELEKAHQILDNANSFVPKMQLHKALEELFNVYDFLNKL 425
Query: 396 VCKEHL----NKNISIAIEKLV 413
+ KE N S +E L+
Sbjct: 426 IAKEEPWVLHKNNESEKLEALL 447
>gi|50954430|ref|YP_061718.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
CTCB07]
gi|50950912|gb|AAT88613.1| methionyl-tRNA synthetase [Leifsonia xyli subsp. xyli str.
CTCB07]
Length = 589
Score = 42.8 bits (99), Expect = 0.11, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V D HIG+A + DVL R R +
Sbjct: 21 VNDVPHIGHAYTEVAADVLVRWHRQAGED 49
>gi|167629315|ref|YP_001679814.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
gi|167592055|gb|ABZ83803.1| methionyl-tRNA synthetase [Heliobacterium modesticaldum Ice1]
Length = 668
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 55/163 (33%), Gaps = 13/163 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A + D + R R V + +T +D+ KI A+ + +
Sbjct: 22 PHIGHAYTTVATDTMARYKRLRG--CDVWF---LTGLDEHGQKIERAAQGKGMAPIDYLD 76
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+T K + ++ + H + + Q I G Y++ E +
Sbjct: 77 PVAVTFKKLWERLEI-----TYDDFIRTTEERHKKAVQVIFQKIWDKGDIYKSEYEGWYC 131
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
T + + ++ + ++ ++ + ++ S
Sbjct: 132 TPCEAFWPERQLKIGEKGEKLCPDCDRPVERMKEESYFFRMSK 174
>gi|329770195|ref|ZP_08261585.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
gi|328837001|gb|EGF86645.1| methionyl-tRNA synthetase [Gemella sanguinis M325]
Length = 666
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 53/178 (29%), Gaps = 14/178 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI--ND 94
HIG+A + D L R + + +T D+ KI ++A+++ S +D
Sbjct: 20 HIGHAYTTVACDALTRYKKLSGYDTFF-----LTGTDEHGQKIQQKAQEKGISEQAYVDD 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-YEANNEII 153
I I + + + H+ +++ + Y ++E
Sbjct: 75 MIKDIKKLWKAMDIDYSKFIRTTDDYHERAVAEIFERLVEKGDIYLGEYQGWYSISDEEY 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
F + + + + K + +K S + +
Sbjct: 135 FTETQLQEVFRDEEGNMIGGIAPSG---NEVKLVSEECYFFKMSKYADRLVKYYDEHP 189
>gi|254689226|ref|ZP_05152480.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|256257476|ref|ZP_05463012.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|260754731|ref|ZP_05867079.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260883752|ref|ZP_05895366.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|297248320|ref|ZP_06932038.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
gi|260674839|gb|EEX61660.1| methionyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260873280|gb|EEX80349.1| methionyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|297175489|gb|EFH34836.1| methionyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
Length = 515
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|323340524|ref|ZP_08080779.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
gi|323092068|gb|EFZ34685.1| methionine--tRNA ligase [Lactobacillus ruminis ATCC 25644]
Length = 678
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 30/181 (16%), Positives = 54/181 (29%), Gaps = 20/181 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I DVL R R + V + +T D+ KI E+A + +N
Sbjct: 23 HIGNSYTTIACDVLARYKRLQGFD--VFF---LTGTDEHGLKIEEKAEE------LNMTP 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K +L H+ + + + ++ G Y + +
Sbjct: 72 QEYVDSMAESIKKLWKQLEISNDKFIRTTDDYHVKAVEQIFEKLLKKGDIYLGKYKGWYS 131
Query: 156 TSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
S + R + + G + D +K S + E
Sbjct: 132 VSDEEYFTESQLAEVYRDENGKMIGGKAPSGHEVELVEEDCYFFKMSKYADRLVEYYNEH 191
Query: 211 G 211
Sbjct: 192 P 192
>gi|308183143|ref|YP_003927270.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
gi|308065328|gb|ADO07220.1| methionyl-tRNA synthetase [Helicobacter pylori PeCan4]
Length = 653
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 22/152 (14%), Positives = 43/152 (28%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI + AR
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKIEQSARLR----- 62
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 63 -NQSPKAYADSISAIFKNQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGTY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRE 153
>gi|300023246|ref|YP_003755857.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
gi|299525067|gb|ADJ23536.1| methionyl-tRNA synthetase [Hyphomicrobium denitrificans ATCC 51888]
Length = 520
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 43/130 (33%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I DV+ R R K V + +T D+ K+ + A +E +
Sbjct: 18 PHIGHAYEAIATDVIARFERLDG--KDVFF---LTGTDEHGLKMKQTAEREGVT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F++ L H L + + G ++ +
Sbjct: 67 PRELADRNSARFIEMVKTLGLSNDDFIRTTEQRHYDACAELWRRMEKAGDIFKRPYGGWY 126
Query: 155 DTSSIPNYGS 164
Y
Sbjct: 127 SVRDETYYKE 136
>gi|126326777|ref|XP_001379390.1| PREDICTED: similar to methionine-tRNA synthetase 2 [Monodelphis
domestica]
Length = 605
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 41/159 (25%), Gaps = 16/159 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT-----YVRNITDIDD---KIIERARQE 86
V HIG+ ++ D L R R VT VR T D+ KI + A
Sbjct: 59 VNAAPHIGHLYSALLADALARYCRLRAAAPPVTSPAAPLVRFSTGTDEHGLKIQQAATAA 118
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHA 145
+ S + + + QF H + + + + G
Sbjct: 119 GLT------PSELCDRVSAQFRALFQEAGISITDFLRTTEARHRRAVHHFWEVLHARGLL 172
Query: 146 YEANNE-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
Y+ E + + V
Sbjct: 173 YKGLYEGWYCASEECFLPDGKVTWRPGPNGQSHPVALDS 211
>gi|260655495|ref|ZP_05860983.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
gi|260629943|gb|EEX48137.1| methionine--tRNA ligase [Jonquetella anthropi E3_33 E1]
Length = 642
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 14/29 (48%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V D HIG+A I DV+ R R +
Sbjct: 14 VNDIPHIGHAYTTIAADVMARFKRMSGYD 42
>gi|62289919|ref|YP_221712.1| methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82699846|ref|YP_414420.1| methionyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
gi|189024161|ref|YP_001934929.1| methionyl-tRNA synthetase [Brucella abortus S19]
gi|254697361|ref|ZP_05159189.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|254730259|ref|ZP_05188837.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260545332|ref|ZP_05821073.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
gi|260757954|ref|ZP_05870302.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260761777|ref|ZP_05874120.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|62196051|gb|AAX74351.1| MetG, methionyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82615947|emb|CAJ10970.1| Aminoacyl-tRNA synthetase, class I:Aminoacyl-tRNA synthetase, class
Ia:Methionyl-tRNA synthetase, class Ia [Brucella
melitensis biovar Abortus 2308]
gi|189019733|gb|ACD72455.1| methionine--tRNA ligase [Brucella abortus S19]
gi|260096739|gb|EEW80614.1| methionine-tRNA ligase [Brucella abortus NCTC 8038]
gi|260668272|gb|EEX55212.1| methionyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260672209|gb|EEX59030.1| methionyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
Length = 515
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 19 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 68 PRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 127
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 128 SVRDEAYYGEEE 139
>gi|332703886|ref|ZP_08423974.1| Methionyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
gi|332554035|gb|EGJ51079.1| Methionyl-tRNA synthetase [Desulfovibrio africanus str. Walvis Bay]
Length = 660
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 53/186 (28%), Gaps = 26/186 (13%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A +V D L R R E +T D DKI++ A + +
Sbjct: 13 VNGSPHLGHAYTTLVADSLARFHRAMGQETFF-----LTGTDEHGDKIVQAADKAGTT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
+ N+ F R H + ++Q + G Y
Sbjct: 66 ----PQALVDANSAAFRDLWKRFGITNTGFVRTTEERHKRCVQAILQKVFDAGDIYHGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ F K + ++ + + + + GW +
Sbjct: 122 SGHYCFGCERFLTDKELVDGKCPDHQIAPELISEKN---------YFFRMSKYQGWLAEH 172
Query: 209 GRGRPG 214
+ PG
Sbjct: 173 IKANPG 178
>gi|154320610|ref|XP_001559621.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
gi|150853466|gb|EDN28658.1| hypothetical protein BC1G_01777 [Botryotinia fuckeliana B05.10]
Length = 579
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 33/194 (17%), Positives = 56/194 (28%), Gaps = 31/194 (15%)
Query: 12 ERKITEF---QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
+ F I Y V H+G+ M++ DV R +
Sbjct: 43 TKSKKPFYVTTPI------FY-----VNAAPHVGHLYTMVLADVFKRWQVLKGNTAILC- 90
Query: 69 VRNITDIDD---KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
T D+ KI A Q I + K+ + A L+ H R
Sbjct: 91 ----TGTDEHGMKIQRAAAQAGALPKEFCDIG-------AETFKELAKRAGLSNDHFVRT 139
Query: 126 T--NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
T +H + Y+ + + YE+ +E + S Y + K + G
Sbjct: 140 TDPDHKETVEYIWYMLREREYIYESKHEGWYCVSDETFYPESAIEKRLDPFTGRTFIASQ 199
Query: 184 HKKNPADFILWKRS 197
++ K
Sbjct: 200 ETGKEVEWTSEKNY 213
>gi|134095829|ref|YP_001100904.1| leucyl-tRNA synthetase [Herminiimonas arsenicoxydans]
gi|166231614|sp|A4G8E6|SYL_HERAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|133739732|emb|CAL62783.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) (LeuRS)
[Herminiimonas arsenicoxydans]
Length = 881
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 53/197 (26%), Gaps = 18/197 (9%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQE 86
Y C Y H+G+ R + DV+YR LR V D E
Sbjct: 42 YACSMLPYPSGKLHMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMPAE 93
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHG 143
+ ++ N + T N + + + + ++ ++ G
Sbjct: 94 NAAMANNVPPAQWTYANIEHMKTQMASMGLAIDWSREMTACKPEYYKWNQWMFLKMLEKG 153
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRST 198
Y+ + +D + + G + ++ A L
Sbjct: 154 IIYKKTGSVNWDPIDQTVLANEQVIDGRGWRSGALIEKREIPMYYARITDYAEELLDHVE 213
Query: 199 PMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 214 HKLPGWPERVRTMQANW 230
>gi|323474877|gb|ADX85483.1| leucyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323477618|gb|ADX82856.1| leucyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|322392166|ref|ZP_08065628.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
gi|321145066|gb|EFX40465.1| methionine--tRNA ligase [Streptococcus peroris ATCC 700780]
Length = 665
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQIFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 191
>gi|306829685|ref|ZP_07462875.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
gi|304428771|gb|EFM31861.1| methionine--tRNA ligase [Streptococcus mitis ATCC 6249]
Length = 679
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 89 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 205
>gi|284998014|ref|YP_003419781.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|284445909|gb|ADB87411.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|229585079|ref|YP_002843581.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|228020129|gb|ACP55536.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|229579332|ref|YP_002837730.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238619982|ref|YP_002914808.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|228010046|gb|ACP45808.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|238381052|gb|ACR42140.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|227827809|ref|YP_002829589.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|227459605|gb|ACP38291.1| leucyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|227830519|ref|YP_002832299.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|227456967|gb|ACP35654.1| leucyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
Length = 944
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|147676404|ref|YP_001210619.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
gi|146272501|dbj|BAF58250.1| methionyl-tRNA synthetase [Pelotomaculum thermopropionicum SI]
Length = 544
Score = 42.8 bits (99), Expect = 0.12, Method: Composition-based stats.
Identities = 54/422 (12%), Positives = 98/422 (23%), Gaps = 86/422 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R + + +T D+ KI AR
Sbjct: 47 DNLHIGHAYTTVAADAVARFKKMTGYDTRF-----LTGTDEHGQKIERAARSRGEDPQEF 101
Query: 94 DA---------ISII----------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
+ T ++ V + +
Sbjct: 102 VDKIVAGIKLLWQKLEVDYDDFIRTTEPRHKKVVSAFFQKLYEQGDIYK--AGYEGWYCT 159
Query: 135 LIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ + S S ++ + +
Sbjct: 160 PCEAFWAESRLEGGNCPDCGRPVELLREESYFFRMSKYAERLLRHIEEHPEFIQPASRRN 219
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K + + G P G+ E ++
Sbjct: 220 EMVSFIKSGLEDLCVSRTTFNWGIPVPFDPGHVIYVWVDALTNYISALGYGTEDDSLFKK 279
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G D++ H A + +G+L LE KMSKS GN
Sbjct: 280 YW--PADVHLMGKDIVRFHSVIWPILLMAAGLELP--RQVVGHGWLLLESGKMSKSKGNV 335
Query: 286 ITI-------------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
+ LL FG + + + + + V R
Sbjct: 336 VDPLVLIDKYGVDAIRYYLLRELPFGADGYYSEEALVERINKDLANDLGNLVSRSIAMVE 395
Query: 333 LLSKWPQTST-----------SKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDL 381
+ PA + L + ++ A+ A+ +L + K D
Sbjct: 396 KYFQGRVQPPGLPEGPDRELIDLAEQTPAAVEELMDKMDLSGALAAIWRLVGRANKYVDE 455
Query: 382 LP 383
Sbjct: 456 TA 457
>gi|237815420|ref|ZP_04594418.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
gi|237790257|gb|EEP64467.1| methionyl-tRNA synthetase [Brucella abortus str. 2308 A]
Length = 530
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 48/132 (36%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+++ AR+E +
Sbjct: 34 PHIGHAYELIATDAMARFQRLNGMD--VYF---LTGTDEHGIKMLQSARKEGIT------ 82
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +NT F + L + + H + Q ++ +G Y+ +
Sbjct: 83 PRDLADRNTSAFRRMAEVLNSSNDDYIRTSEERHYKASQAIWQAMVANGDIYKGGYAGWY 142
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 143 SVRDEAYYGEEE 154
>gi|229581908|ref|YP_002840307.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228012624|gb|ACP48385.1| leucyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 944
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + D+L R R
Sbjct: 43 HIGHGRTYVTGDILARYKRMRGYN 66
>gi|121706923|ref|XP_001271676.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
gi|119399824|gb|EAW10250.1| methionine-tRNA synthetase [Aspergillus clavatus NRRL 1]
Length = 574
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 27/194 (13%), Positives = 58/194 (29%), Gaps = 23/194 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ D+L R + + +T D+ KI + A
Sbjct: 64 VNAAPHVGHFYTMVIADILKRWQVLLGNKN----AQLLTGTDEHGMKIQQAALAAGMDTQ 119
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ + + + A + H R T+ H + Y + + G+ Y +
Sbjct: 120 AFCDMN-------CKTFEALAKAANIDNDHFIRTTDPAHKEAVQYFWEILNHRGYIYTSK 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW-------KRSTPMEP 202
+E + S Y + + G + ++
Sbjct: 173 HEGWYSVSDETFYPPTQVQNSLDPSTGRKRMVSTETGKEVEWSSETNYHFRLSAFQDRLL 232
Query: 203 GWESPWGRGRPGWH 216
+ S PG +
Sbjct: 233 EFYSSTDFIAPGNY 246
>gi|20806639|ref|NP_621810.1| methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
gi|25009362|sp|Q8RDD1|SYM_THETN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|20515086|gb|AAM23414.1| Methionyl-tRNA synthetase [Thermoanaerobacter tengcongensis MB4]
Length = 638
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 23/179 (12%), Positives = 42/179 (23%), Gaps = 19/179 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI AR++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD-----VMFLTGTDEHGQKIQRIAREKGMS---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + H + + + G Y+
Sbjct: 67 --PKEYVDGIVEWIKDLWKTMDISYDHFIRTTDAYHEEIVQKIFMKLYEQGDIYKGEYEG 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESP 207
S K + + K + P + P
Sbjct: 125 WYCTPCESFWTESQLVDGKCPDCGRPVERVTEEGYFFRLSAYGDKLLKYYEEHPDFIQP 183
>gi|325478237|gb|EGC81356.1| methionine--tRNA ligase [Anaerococcus prevotii ACS-065-V-Col13]
Length = 647
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 49/177 (27%), Gaps = 17/177 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN ++ DVL R + +T T D+ KI++ A
Sbjct: 21 HIGNTYTSVIADVLKRYKNLLGYDTYLT-----TGTDEHGQKIMKSAEAAGVDPQSFVD- 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I S+ + K + + H + + + G Y+ + + T
Sbjct: 75 -KIASETIDLWEKLEIDY---DTFIRSTESQHEKDVEEIFTKLYEQGDIYKGEYKGYYCT 130
Query: 157 SSIPN----YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + E Y + K P + P
Sbjct: 131 PCETFWSKSQLEDGKCPDCGRDVEYQEEETYFFRLSKYTDRLKELFKDHPDFLEPAF 187
>gi|157803251|ref|YP_001491800.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
gi|166232834|sp|A8EXD2|SYR_RICCK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|157784514|gb|ABV73015.1| arginyl-tRNA synthetase [Rickettsia canadensis str. McKiel]
Length = 576
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + DVL R+L+ Y N
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGYNVTKEYYVN 164
>gi|17227729|ref|NP_484277.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
gi|25009375|sp|Q8Z068|SYM_ANASP RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|17135211|dbj|BAB77757.1| methionyl-tRNA synthetase [Nostoc sp. PCC 7120]
Length = 530
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D + R + + + IT D+ KI +R+ +
Sbjct: 20 VNDVPHIGSAYTTMAADAVARFQKLLGRDVLL-----ITGTDEHGQKI-QRSAE-----S 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ A + F+ L + A H + + G Y+
Sbjct: 69 LGKAPQEFCDEIVPSFMSLWRLLNIQYDRFSRTTAVRHKAIVDEFFARVWEAGDIYQGQQ 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + S + + + ++ + F L K T +E ++S
Sbjct: 129 KGWYCVSCEEFKEERELLEGNRCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYQSHPDF 188
Query: 211 GRP 213
+P
Sbjct: 189 IQP 191
>gi|330836672|ref|YP_004411313.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
gi|329748575|gb|AEC01931.1| methionyl-tRNA synthetase [Spirochaeta coccoides DSM 17374]
Length = 748
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 21/156 (13%), Positives = 40/156 (25%), Gaps = 9/156 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V + H+GN ++ DV R R E YV TD E ++
Sbjct: 21 PYVNNIPHLGNLTQVLSADVFARFCRSKGYETL--YVCG-TD-----EYGTATETKALQE 72
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANNE 151
+ + +T +++ I + +G+ +E E
Sbjct: 73 GVTPQELCDRYHAIHRDIYRWFNISFDHFGRTSTPLQTKIVQDIFNAVDANGYIHEHEIE 132
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
++ T +
Sbjct: 133 QLYCTHDQMYLADRYVTGTCPHCAYENARGDQCENC 168
>gi|303248590|ref|ZP_07334846.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302490031|gb|EFL49953.1| methionyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 651
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 72/486 (14%), Positives = 132/486 (27%), Gaps = 103/486 (21%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI- 90
V H+G+A IV D L R + + V + +T D DKI E A++ +
Sbjct: 13 VNAKPHLGHAYTTIVVDALARF--HALLGEEVFF---LTGTDEHGDKIAEAAQKAGQTPK 67
Query: 91 PINDAISIIT-----------SKNTQQFVKDTT-------RLACLAPTHQPRA-TNHIPQ 131
D+IS + + + D +L H +
Sbjct: 68 EYADSISGLFSSLWPKLGIAPRRFIRTTDPDHKEAVKKALQLVYDKGDIYFGEYGGHYCK 127
Query: 132 MIYLIQNIILHGHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++++ + S + + E + +
Sbjct: 128 GCERFLTEKELVDGLCPDHKVKPEYIAEKNYFFRMSKYQGALLEHIKANPDFIRPRQYRN 187
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY---------------------- 226
L + + P + R W IE +
Sbjct: 188 EVVSLLESGALEDLCISRP--KSRLTWGIELPFDDNFVTYVWFDALMNYLTAIGWPDDPD 245
Query: 227 LGKVFDI--HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
K +D+ H D++ H A + + +H + KMSKS GN
Sbjct: 246 FSKWWDVAEHVVAKDIL-KPHAVFWPTMLLAMGLPLYKRLNVHGY-WLVRDTKMSKSLGN 303
Query: 285 FITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI---DFTVQRLTEAEILLSK-WPQT 340
I + E G + + + + F + L ++ T
Sbjct: 304 VIEPLAMAEQAGLSGMRYFLLREMVFGSDASFSDEALIGRFNADLANDLGNLANRALAMT 363
Query: 341 STSKGIIDPAVLSALYND--------------------LNTVSAIQALHKLARESTKNHD 380
+ G PA + D A++AL +L R K D
Sbjct: 364 TKYFGGTVPASDAPQAADAELARLGREAMANFVQLFGAAQFSRALEALWELVRGLNKYID 423
Query: 381 LLP---IFNA---------SAHIL-GIEVCKEHLNKNISIAIEKLVQE-------RLILL 420
+ +F A +L G+ L + A EKL+ + +
Sbjct: 424 AMAPWTLFKEGDTARLGTVMATVLGGLRQVAVCLLPVMPEAAEKLLAQLGQETAGLNLAK 483
Query: 421 KMKKFS 426
+ + F+
Sbjct: 484 EAENFA 489
>gi|299536738|ref|ZP_07050048.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
gi|298727852|gb|EFI68417.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
Length = 658
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 15/150 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A + D +
Sbjct: 22 HIGTAYTTVASDTIARYKRLKGYD--VRF---LTGMDEHGQKIQEKAAEAGKHPQ--DYV 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--ANNEIIF 154
+ I + + Q H + + Q + +G Y+
Sbjct: 75 NEIADAAKKLW---GLMDISYDDFIQTTQDRHTKAVEKIFQKFLDNGDIYKGEYEGWYCT 131
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 132 PCESFFTETQLVDGNCPDCGRPVHKVKEES 161
>gi|126654257|ref|ZP_01726045.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
B14905]
gi|126589290|gb|EAZ83448.1| methionyl-tRNA synthetase (methionine--tRNA ligase) [Bacillus sp.
B14905]
Length = 658
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 22/150 (14%), Positives = 43/150 (28%), Gaps = 15/150 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A + D +
Sbjct: 22 HIGTAYTTVASDAIARYKRLRGYD--VRF---LTGMDEHGQKIQEKAAEAGKHPQ--DYV 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--ANNEIIF 154
+ I + + Q H + + Q + +G Y+
Sbjct: 75 NEIAEAAKKLW---ALMDISYDDFIQTTQERHTKAVEKIFQKFLDNGDIYKGEYEGWYCT 131
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S + ++
Sbjct: 132 PCESFFTETQLVDGNCPDCGRPVHKVKEES 161
>gi|86749798|ref|YP_486294.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
gi|86572826|gb|ABD07383.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris HaA2]
Length = 514
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 48/142 (33%), Gaps = 15/142 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R + V + +T D+ K+I+ A++E +
Sbjct: 18 GAPHIGHAYEAIATDALARFQRLDG--RDVFF---LTGTDEHGLKMIQTAQKEGVETHV- 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N +F R + H + + + + +G Y +
Sbjct: 72 -----LAARNAGRFRDMDDRFGISYDRFIRTSEEQHHRSVQEVWKRMQANGDIYLDSYAG 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQK 174
+ Y ++Q
Sbjct: 127 WYSVRDEAYYAEDETVVGEDQI 148
>gi|309775299|ref|ZP_07670308.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
gi|308916962|gb|EFP62693.1| methionine--tRNA ligase [Erysipelotrichaceae bacterium 3_1_53]
Length = 681
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 57/420 (13%), Positives = 106/420 (25%), Gaps = 85/420 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIGN +I+ D + R R + V + T D+ KI E+A++ +
Sbjct: 46 GRPHIGNTYEIILTDAIARYKRQQGYD--VFFQ---TGTDEHGQKIEEKAKEAGVTPKEF 100
Query: 94 DA-ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ I KN + + L + ++ YE
Sbjct: 101 VDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQV--QKIFKKLYEQGDIYKSTYEGLYCT 158
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP----- 207
++ + + + + E Y + P + P
Sbjct: 159 PCESFWTESQLVDGKCPDCGRPVEKASEEAYFFNLQKYAPRLIKHIEDHPEFIQPESRKN 218
Query: 208 ---WGRGRPGWHIECSAMSSHYLGKVF--------------------------------- 231
+PG C + +S G
Sbjct: 219 EMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITSLGFDADGNHGEL 278
Query: 232 -------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H E + +L + KMSKS GN
Sbjct: 279 YKKYWPADVHIIGKDILRFHTIYWPIMLMALG--EPLPKQVFGHPWLLVGDGKMSKSKGN 336
Query: 285 FITINELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
I +EL+ + I +++ + + L I +
Sbjct: 337 AIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVLGNLVNRTISMQ 396
Query: 336 KWPQTSTSKGIID---------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
++ P + L+ AI + L + K D
Sbjct: 397 NKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIFTLLKRCNKYID 456
>gi|296140917|ref|YP_003648160.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
gi|296029051|gb|ADG79821.1| methionyl-tRNA synthetase [Tsukamurella paurometabola DSM 20162]
Length = 516
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 44/161 (27%), Gaps = 15/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R + V + +T D+ K+ + A +E
Sbjct: 20 PHIGHAYEYIATDTIARFKRLDGFD--VFF---LTGTDEHGLKMQQAAAKEGIET----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N F + T+H + + + G Y +
Sbjct: 70 -KALADRNAAAFEALQRAVGSTFDRFIRTTDTDHYAASQAIWEKLAARGDIYLDTFAGWY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y +++ + ++
Sbjct: 129 SVRDEAYYAEDETALLEDGTRAAISTGTPVEWTEEASYFFR 169
>gi|148992454|ref|ZP_01822149.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|147928771|gb|EDK79784.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
Length = 665
Score = 42.8 bits (99), Expect = 0.13, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQVYVDR 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|242309749|ref|ZP_04808904.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
gi|239523750|gb|EEQ63616.1| methionyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
Length = 643
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 60/457 (13%), Positives = 120/457 (26%), Gaps = 101/457 (22%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R + V + +T D+ KI + A++ +
Sbjct: 14 VNDIPHIGHAYTTIIADTLARF--HRLLGDEVLF---LTGTDEHGQKIQQSAQKNGKNPK 68
Query: 92 INDAISIITSKNTQQF--VKDTTRLACLAPTHQPRAT-----------------NHIPQM 132
+ + I+S+ + + T +
Sbjct: 69 --EYVDEISSRFRNLWDSFGIGYDWFIRTTDSYHKETAQNVFLKMFQKGDIYKGEYEGNY 126
Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNYGS-------FSRRKIDEQKMGTRVPEKYHK 185
++ E + ++ +
Sbjct: 127 CVSCESFFAKSQLIEQKKCPDCGKETNLLKEESYFFRLSAYGDRLLQWIEQNPECILPKM 186
Query: 186 KNPADFILWK------------------------RSTPMEPGWESPWGRGRPGWHIECSA 221
+ K S + W + +
Sbjct: 187 RRNEVINFIKEGLEDLSITRTSFDWGIKLPNEIGDSKFVMYVWLDALVNYLSALGYQ-NN 245
Query: 222 MSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE---KTANIWIHNGFLNLEGRKM 278
+ + + H G D++ H A A + +G+ +G KM
Sbjct: 246 LENKMDFWPANYHLVGKDILRFH-----AVYWPAFLMSLELPLPKHIAAHGWWTKDGAKM 300
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEIL---- 333
SKS GN + E++E+ + R +L + + DF+ + L E
Sbjct: 301 SKSIGNVVNPKEVVES-------YGIDCFRYFVLREVPFGQDGDFSQKALIERFNADLGN 353
Query: 334 -----------LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLL 382
+S +T ++ + + + L+K+ +E N L
Sbjct: 354 DLGNLLNRLLGMSAKYFDNTLNVDLESYQNAYKMEIEEIKAILGNLNKMMQEVQINRYLE 413
Query: 383 PIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
++ GI KE KL++E
Sbjct: 414 ELWRLFNLANGIIAKKEPW---------KLIKENKQA 441
>gi|168010013|ref|XP_001757699.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690975|gb|EDQ77339.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 366
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 9/52 (17%), Positives = 22/52 (42%)
Query: 397 CKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNP 448
+ N+ + V R +++AD ++K+++ G+ + D N
Sbjct: 191 KDKREAANVPKGVMDAVSRRRTARAQHDYATADALQKEIKQAGYKVIDAPNG 242
>gi|149021655|ref|ZP_01835686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
gi|147930116|gb|EDK81102.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP23-BS72]
Length = 665
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQVYVDR 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|75908935|ref|YP_323231.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
gi|75702660|gb|ABA22336.1| methionyl-tRNA synthetase [Anabaena variabilis ATCC 29413]
Length = 530
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 29/183 (15%), Positives = 58/183 (31%), Gaps = 15/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D + R + + + IT D+ KI +R+ +
Sbjct: 20 VNDVPHIGSAYTTMAADAVARFQKLLGRDVLL-----ITGTDEHGQKI-QRSAE-----S 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ A + F+ L + A H + + G Y+
Sbjct: 69 LGKAPQEFCDEIVPSFMSLWQLLNIQYDRFSRTTAVRHKAIVDEFFARVWQAGDIYQGQQ 128
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + S + + + ++ + F L K T +E ++S
Sbjct: 129 KGWYCVSCEEFKEERELLEGNRCPIHVNKEVEWRDEQNYFFRLSKYQTQLEEFYKSHPDF 188
Query: 211 GRP 213
+P
Sbjct: 189 IQP 191
>gi|114704621|ref|ZP_01437529.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
gi|114539406|gb|EAU42526.1| methionyl-tRNA synthetase [Fulvimarina pelagi HTCC2506]
Length = 518
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 23/134 (17%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D L R R + V + +T D+ K+++ AR + +
Sbjct: 18 PHIGHAYELIATDALARFKRLDGYD--VFF---LTGTDEHGIKMLQNARAQGLT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ N+ +F + + L + H + + + G Y+ +
Sbjct: 67 PRELADANSAEFQRMSAALGGSNDDFIRTSEARHKIACQAIWKRMEEAGDIYKDAYSGWY 126
Query: 155 DTSSIPNYGSFSRR 168
YG
Sbjct: 127 SVRDEAYYGEDETH 140
>gi|134296619|ref|YP_001120354.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|187647710|sp|A4JGW6|SYM_BURVG RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|134139776|gb|ABO55519.1| methionyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 721
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEMEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D ++ ++ + A
Sbjct: 82 -PKQLIDRVWAEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALKENGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y + +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTDLLNPY 187
>gi|315613349|ref|ZP_07888258.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
gi|315314584|gb|EFU62627.1| methionine--tRNA ligase [Streptococcus sanguinis ATCC 49296]
Length = 679
Score = 42.8 bits (99), Expect = 0.14, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDS 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 89 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQNRLVEFFKSHPDF 205
>gi|297264852|ref|XP_001084970.2| PREDICTED: ATP-binding cassette sub-family A member 12 isoform 1
[Macaca mulatta]
Length = 2581
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 32/156 (20%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1690 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1746
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + +
Sbjct: 1747 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYGNYHPSTEALVSAMWDFPGVDNMCLNT 1806
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L W + CS
Sbjct: 1807 SDLRCLKKDSLEKWNTSGEPITNFGVCSCSENVQEC 1842
>gi|219113839|ref|XP_002186503.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|209583353|gb|ACI65973.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 601
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 10/51 (19%), Positives = 26/51 (50%), Gaps = 12/51 (23%)
Query: 409 IEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
+++ +++R+ +++++AD I K L + G ++D WK+
Sbjct: 87 VQQKLEQRISYKAARQWNAADRIEKGLTAMGVEIDD------------WKR 125
>gi|322376351|ref|ZP_08050844.1| methionine--tRNA ligase [Streptococcus sp. M334]
gi|321282158|gb|EFX59165.1| methionine--tRNA ligase [Streptococcus sp. M334]
Length = 665
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQSYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVDFFKAHPDF 191
>gi|317495634|ref|ZP_07954001.1| methionyl-tRNA synthetase [Gemella moribillum M424]
gi|316914253|gb|EFV35732.1| methionyl-tRNA synthetase [Gemella moribillum M424]
Length = 665
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 55/178 (30%), Gaps = 14/178 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI--PIND 94
HIG+A + D L R + + +T D+ KI ++A+++ S ++D
Sbjct: 20 HIGHAYTTVACDALTRYKKLSGFDTYF-----LTGTDEHGQKIQQKAQEKGVSEQQYVDD 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-YEANNEII 153
I I + + + + H+ +++ + Y ++E
Sbjct: 75 MIKDIKKLWSAMDIDYSKFIRTTDGYHERAVAEIFERLVEKGDIYLGEYKGWYSISDEEY 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
F + + + + K + +K S + +
Sbjct: 135 FTETQLQEVFRDEDGNMIGGIAPSG---NEVKLVSEECYFFKMSKYADRLVKYYDEHP 189
>gi|307708991|ref|ZP_07645451.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
gi|307620327|gb|EFN99443.1| methionyl-tRNA synthetase [Streptococcus mitis SK564]
Length = 665
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|225869985|ref|YP_002745932.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
gi|225699389|emb|CAW92834.1| methionyl-tRNA synthetase [Streptococcus equi subsp. equi 4047]
Length = 667
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R + V Y +T +D+ KI ++A++ S
Sbjct: 21 HIGSAYTTIACDVLARYKRMLGYD--VFY---LTGLDEHGQKIQDKAQEAGLSPQAYVDG 75
Query: 96 --------ISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHG 143
++ + + R ++
Sbjct: 76 MAEEVKALWKLLDISYDKFIRTTGDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 136 FTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDF 192
>gi|312128513|ref|YP_003993387.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
gi|311778532|gb|ADQ08018.1| methionyl-tRNA synthetase [Caldicellulosiruptor hydrothermalis 108]
Length = 653
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 17/151 (11%), Positives = 36/151 (23%), Gaps = 17/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 20 HIGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQE------VGKTP 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H + + + G Y+
Sbjct: 69 QEYVDEIVASIKDLWKLMNISYDDFIRTTEDRHKKVVQKIFTKLYEQGDIYKSEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 129 TPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|327462090|gb|EGF08419.1| methionine--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 665
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 56/181 (30%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
++ K Q + + A + + + Y ++E
Sbjct: 76 MVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|27805747|sp|Q9C4B7|SYK_METBA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|13540310|gb|AAK29405.1|AF337056_1 lysyl tRNA Synthetase [Methanosarcina barkeri]
Length = 537
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 51/312 (16%), Positives = 95/312 (30%), Gaps = 35/312 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T HIGN R ++ D +YR L Y I D D + + +
Sbjct: 27 GITPSGNIHIGNMREVVTADAVYRALVDKGANADFIY---IADNYDPLRKVYPFLPESYV 83
Query: 86 EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
EH PI++ + + F++ RL ++ + I+
Sbjct: 84 EHVGKPISEIPCPCGNCANYAEHFLKPFLEALRRLGINPKVYRADEMYKTGKYTEAIKTA 143
Query: 140 ILHGHAY-EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
++ A + E+ T + R + T+V + D++ +
Sbjct: 144 LVKRDAIAKILEEVSGKTVASDWSPFNPRCDQCGRITTTKVTGFDLEAETVDYVCACEHS 203
Query: 199 PMEP---GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
P G + W P LG + G ++
Sbjct: 204 GTVPMAGGGKLTWRVDWPAR--------WSVLGVTVEPFGKDHASRGGSYDTGKRIVKEI 255
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E I + + MS S G ++I+++L + P V+R ++ T
Sbjct: 256 FGHEPPYPIVYEW-IMLGKQGAMSSSTGVVVSISDML-------KIVPPEVLRYLIIRTK 307
Query: 316 YREPIDFTVQRL 327
+ I F +
Sbjct: 308 PEKHIQFDPGQP 319
>gi|307704594|ref|ZP_07641498.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
gi|307621851|gb|EFO00884.1| methionyl-tRNA ligase [Streptococcus mitis SK597]
Length = 665
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|269792312|ref|YP_003317216.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
gi|269099947|gb|ACZ18934.1| leucyl-tRNA synthetase [Thermanaerovibrio acidaminovorans DSM 6589]
Length = 829
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 42/154 (27%), Gaps = 17/154 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + D++ R LR V Y A E+ ++
Sbjct: 47 HMGHLRNYSIGDLMARFLRMNGY--NVLYPMGF---------DAFGLPAENAALKFGVQP 95
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T KN + ++ C + T + +L G AY +
Sbjct: 96 AEWTWKNIEHMTGQLKKMGCSYDWRRRVETCNPDYYRWTQWLFLQFFKKGLAYRKEAPVN 155
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ S + K + +
Sbjct: 156 WCESCKTVLANEQVVDGGHCWRCGTAVTKRNLEQ 189
>gi|203288091|ref|YP_002223106.1| lysyl-tRNA synthetase [Borrelia recurrentis A1]
gi|201085311|gb|ACH94885.1| lysyl-tRNA synthetase [Borrelia recurrentis A1]
Length = 532
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 86/360 (23%), Gaps = 62/360 (17%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV---------------------- 69
G T HIGN R +I D++ R L+ K V ++
Sbjct: 40 GITPSGTVHIGNFREVISVDLVARALQDQG--KQVRFIYSWDNYDVFRKVPKNMPDQELL 97
Query: 70 -----RNITDI-DDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ IT + D K + AR + I + Q +K +
Sbjct: 98 TTYLRQAITRVPDTKTNKSSYARANEIEFEQHLPTVGIEPEFIDQSLKYMSSD------- 150
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
I I+ + ++ S + I +
Sbjct: 151 YANQIKFALDHKDEIATILNKYRITQLADDWYP-ISIFCTKCNRDTTTIKNYNHCYSIEY 209
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
N L K P W W +++ GK GG D
Sbjct: 210 YCECGNKESLDLRKTWACKLP-WRIDWPMRWKYENVD-----FEPAGKDHHSSGGSFD-- 261
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
+ + G K+S S+G+ +++ ++LE
Sbjct: 262 ------TAKEIVKIFGGTPPITFQYDFISIKGHGGKISSSSGDVVSLKDVLEI------- 308
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL-TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ V R T + + K+ + I
Sbjct: 309 YTPEVTRFLFASTKPNTEFAISFDLDVIKIYEDYDKFERVYYGIDEIQEKKKETFKRIYE 368
>gi|116074880|ref|ZP_01472141.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
gi|116068102|gb|EAU73855.1| methionyl-tRNA synthetase [Synechococcus sp. RS9916]
Length = 514
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 25/178 (14%), Positives = 49/178 (27%), Gaps = 14/178 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ + D L R R + V + IT +D+ KI A +
Sbjct: 12 VNDKPHLGSTYTTLACDALARFQRLEGND--VVF---ITGVDEHGQKIQRTAADRGVTPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ IT + + + + H+P + + +G
Sbjct: 67 --EHCDAITKRYISLW---SDWGISNDRFVRTTEERHLPLVEAFFKRCEANGDIRIGRQT 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ K + + ++ + F L +E P
Sbjct: 122 GWYCVGCEEFKDEPPEAKDPYCPIHQKA-LEWRDEENLFFCLSNFQDKIEQLISQPDF 178
>gi|51473278|ref|YP_067035.1| arginyl-tRNA synthetase [Rickettsia typhi str. Wilmington]
gi|81390280|sp|Q68XT9|SYR_RICTY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|51459590|gb|AAU03553.1| Arginine translase [Rickettsia typhi str. Wilmington]
Length = 576
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGY 155
>gi|253755323|ref|YP_003028463.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
gi|251817787|emb|CAZ55539.1| methionyl-tRNA synthetase [Streptococcus suis BM407]
Length = 667
Score = 42.4 bits (98), Expect = 0.14, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R E V Y +T +D+ KI E+A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIEEKAKEAGLTPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K + + A + + + Y ++E
Sbjct: 75 MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + + + L K + + + +P
Sbjct: 135 FTESQLEEVFRDENGKVTSGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|284162686|ref|YP_003401309.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284012683|gb|ADB58636.1| lysyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 496
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R M+ D + R + G+ + YV
Sbjct: 26 GITPSGPIHIGNLREMLTADAIRRAIIDKGGKAEIVYV 63
>gi|315607117|ref|ZP_07882121.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
gi|315251171|gb|EFU31156.1| methionine--tRNA ligase [Prevotella buccae ATCC 33574]
Length = 686
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 44/170 (25%), Gaps = 24/170 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 22 HIGHLAGVYVPADIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------IRAKKEGIT-- 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + + H + + G E
Sbjct: 71 ----PQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLVEKET 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E +D + +K +D + P
Sbjct: 127 EQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPH 176
>gi|307127662|ref|YP_003879693.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
gi|306484724|gb|ADM91593.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 670-6B]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|288926899|ref|ZP_06420799.1| methionine--tRNA ligase [Prevotella buccae D17]
gi|288336338|gb|EFC74719.1| methionine--tRNA ligase [Prevotella buccae D17]
Length = 686
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 44/170 (25%), Gaps = 24/170 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 22 HIGHLAGVYVPADIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------IRAKKEGIT-- 70
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + + H + + G E
Sbjct: 71 ----PQDVVDRYHKMIKESFEEFGISFDVYSRTTSKTHARLASDFFRKLYDDGKLVEKET 126
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E +D + +K +D + P
Sbjct: 127 EQYYDEEAHQFLADRYIMGECPHCHNENAYGDQCEKCGSDLSPMELINPH 176
>gi|239616422|ref|YP_002939744.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
gi|259511506|sp|C5CHA1|SYI_KOSOT RecName: Full=Isoleucyl-tRNA synthetase; AltName:
Full=Isoleucine--tRNA ligase; Short=IleRS
gi|239505253|gb|ACR78740.1| isoleucyl-tRNA synthetase [Kosmotoga olearia TBF 19.5.1]
Length = 921
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 39/234 (16%), Positives = 78/234 (33%), Gaps = 18/234 (7%)
Query: 164 SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMS 223
+ + + + + + K+ + W G E
Sbjct: 485 EEKGTDVWFEWSESDLLPEGYTCPKCGSKNLKKQEDILDVWVDS------GSSFEAVVKV 538
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
L D++ G D ++ + S + + ++ H + +GRKMSKS G
Sbjct: 539 MDELRFPADVYIEGSDQHRGWFQSSLLLSVGTEGVAPFKSVITHGFINDEQGRKMSKSLG 598
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMTHY----REPIDFTVQRLTEAEILLSKWPQ 339
N + E+ + A ++RL + ++Y R ++ Q++ + + +
Sbjct: 599 NAVDPQEI-------NNKYGAEILRLWVASSNYQEDIRISMNIIQQQIENYKKIRNTLRY 651
Query: 340 TSTSKGIIDPAVLSALYNDLNTV-SAIQALHKLARESTKNHDLLPIFNASAHIL 392
+ P L AI LHKL R+ T+ +D + IL
Sbjct: 652 LLGNLSDYSPQDSVPYEELLELDKWAIMKLHKLIRDVTRYYDRYEFYKVFQSIL 705
>gi|255936271|ref|XP_002559162.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583782|emb|CAP91800.1| Pc13g07310 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 570
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 47/329 (14%), Positives = 80/329 (24%), Gaps = 69/329 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ D++ R + +T D+ KI + A Q
Sbjct: 61 VNAAPHVGHLYTMVIADIMKRWQVLLGNTD----AQLLTGTDEHGMKIQQAAIQAGMDTQ 116
Query: 92 IN-----DAISIITS----------KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI 136
+ + T +D + H R + +
Sbjct: 117 AFCDMNCRTFEALAKAANIDNDHFIRTTDPAHRDAVQYFWEMLQH--RGYIYTSRHEGWY 174
Query: 137 QNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
+ + ++ S K E T + L+KR
Sbjct: 175 SVSDETFYPQTQVQNSLDPSTGRKRMVSIETGKEVEWSSETNYHFRLSAFKDRLLDLYKR 234
Query: 197 STPM------------------------EPGWESPWGRGRPGWHIECSAMSSHYLGK--- 229
P P WG PG + + L
Sbjct: 235 EDPFISPTSYTAAVINGVETGLQDLSISRPTERLTWGIPVPGDDTQTIYVWLDALVNYLT 294
Query: 230 ----------------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNL 273
D+H G D++ H A D + +G +
Sbjct: 295 KAGYPFPPGQENTSAWPADLHVVGKDIVRFHCVYWPAFLMALD--LPLPRNVLVHGHWTM 352
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSW 302
KMSKS GN + +E G +
Sbjct: 353 NHEKMSKSTGNVVNPFFAIERFGVDGMRF 381
>gi|148997133|ref|ZP_01824787.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|149007671|ref|ZP_01831288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|168575450|ref|ZP_02721386.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|307067392|ref|YP_003876358.1| methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
gi|147756833|gb|EDK63873.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|147760826|gb|EDK67797.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP18-BS74]
gi|183578466|gb|EDT98994.1| methionyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|306408929|gb|ADM84356.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae AP200]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|332204797|gb|EGJ18862.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA47901]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|331266178|ref|YP_004325808.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
gi|326682850|emb|CBZ00467.1| methionyl-tRNA synthetase [Streptococcus oralis Uo5]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 75 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQNRLVEFFKSHPDF 191
>gi|307706348|ref|ZP_07643160.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
gi|307618266|gb|EFN97421.1| methionyl-tRNA synthetase [Streptococcus mitis SK321]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|301793944|emb|CBW36340.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV104]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|225858596|ref|YP_002740106.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|225720402|gb|ACO16256.1| methionyl-tRNA synthetase [Streptococcus pneumoniae 70585]
gi|332077203|gb|EGI87665.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA17545]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|209517543|ref|ZP_03266383.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
gi|209502076|gb|EEA02092.1| leucyl-tRNA synthetase [Burkholderia sp. H160]
Length = 863
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AQWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 193
>gi|149003418|ref|ZP_01828307.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
gi|237649434|ref|ZP_04523686.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974]
gi|237821933|ref|ZP_04597778.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CCRI 1974M2]
gi|147758601|gb|EDK65599.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS69]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|313898934|ref|ZP_07832461.1| methionine--tRNA ligase [Clostridium sp. HGF2]
gi|312956133|gb|EFR37774.1| methionine--tRNA ligase [Clostridium sp. HGF2]
Length = 657
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 57/420 (13%), Positives = 106/420 (25%), Gaps = 85/420 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIGN +I+ D + R R + V + T D+ KI E+A++ +
Sbjct: 22 GRPHIGNTYEIILTDAIARYKRQQGYD--VFFQ---TGTDEHGQKIEEKAKEAGVTPKEF 76
Query: 94 DA-ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ I KN + + L + ++ YE
Sbjct: 77 VDKVAGIVRKNFDMMNTSYDYFIRTTDDYHEKQV--QKIFKKLYEQGDIYKSTYEGLYCT 134
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP----- 207
++ + + + + E Y + P + P
Sbjct: 135 PCESFWTESQLVDGKCPDCGRPVEKASEEAYFFNLQKYAPRLIKHIEDHPEFIQPESRKN 194
Query: 208 ---WGRGRPGWHIECSAMSSHYLGKVF--------------------------------- 231
+PG C + +S G
Sbjct: 195 EMINNFLKPGLQDLCVSRTSFKWGIPVDFDPGHVVYVWIDALSNYITSLGFDADGNHGEL 254
Query: 232 -------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGN 284
D+H G D++ H E + +L + KMSKS GN
Sbjct: 255 YQKYWPADVHIIGKDILRFHTIYWPIMLMALG--EPLPKQVFGHPWLLVGDGKMSKSKGN 312
Query: 285 FITINELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
I +EL+ + I +++ + + L I +
Sbjct: 313 AIYADELVHYFGVDAVRYFVLHEMPFAQDGTITWDLVVERINSDLANVLGNLVNRTISMQ 372
Query: 336 KWPQTSTSKGIID---------------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
++ P + L+ AI + L + K D
Sbjct: 373 NKYFNGVISNPLEQEDIDKELIALALDTPKRVEKKMETLHVGEAIDEIFTLLKRCNKYID 432
>gi|224436874|ref|ZP_03657863.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
gi|313143352|ref|ZP_07805545.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
gi|313128383|gb|EFR46000.1| arginyl-tRNA synthetase [Helicobacter cinaedi CCUG 18818]
Length = 534
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + DVL R+ R+ E Y N
Sbjct: 115 PT--GPLHIGHARGAVYGDVLSRVGRHLGYEITTEYYIN 151
>gi|57641170|ref|YP_183648.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|68753983|sp|Q5JGH7|SYR_PYRKO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|57159494|dbj|BAD85424.1| arginyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 642
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+AR ++ D + R++R V +N IDD
Sbjct: 140 HMGHARNAVLGDTMARIMRKLGYTVEV---QNY--IDD 172
>gi|15603944|ref|NP_220459.1| arginyl-tRNA synthetase [Rickettsia prowazekii str. Madrid E]
gi|6226193|sp|Q9ZE81|SYR_RICPR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|3860635|emb|CAA14536.1| ARGINYL-TRNA SYNTHETASE (argS) [Rickettsia prowazekii]
gi|292571662|gb|ADE29577.1| Arginyl-tRNA synthetase [Rickettsia prowazekii Rp22]
Length = 576
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGY 155
>gi|116754085|ref|YP_843203.1| lysyl-tRNA synthetase [Methanosaeta thermophila PT]
gi|116665536|gb|ABK14563.1| lysyl-tRNA synthetase [Methanosaeta thermophila PT]
Length = 497
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 50/309 (16%), Positives = 94/309 (30%), Gaps = 29/309 (9%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T HIGN R ++ D +YR L E + Y I D D++ ++ + +
Sbjct: 24 GITPSGPVHIGNLREVMTADAVYRALVDRGVEARLIY---IADTYDRLRRLYPFLDESFR 80
Query: 86 EHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
EH P+++ S + Q F++ L Q+ +
Sbjct: 81 EHVGKPLSEIPCPEGCCSSYSEHFLQPFLRAMDLLDIKP------EVYRADQLYKEGVYL 134
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
A + +EI + + + D +
Sbjct: 135 DAIKTALKKRDEIARILKEVSGRDVSPGWSPFDPICRDCGRMNTTRVTGFDLDSERVDYV 194
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
E G G + + + + G D + + D
Sbjct: 195 CECGSTGSVSMRGGGKLVWRVDWPARWHILRVTVEPFGKDHATAGGSYDTGKRISEDVYN 254
Query: 260 KTANIWIHNGFLNLEGR-KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
A I +++L+G+ M S G +T+ E+L+ P V+R ++ T +
Sbjct: 255 YPAPYPIVYEWIHLKGKGAMHSSTGLVVTVQEMLDVV-------PPEVLRYLIIRTKPEK 307
Query: 319 PIDFTVQRL 327
I+F
Sbjct: 308 HIEFDPGLP 316
>gi|222823730|ref|YP_002575304.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
gi|222538952|gb|ACM64053.1| methionyl-tRNA synthetase [Campylobacter lari RM2100]
Length = 629
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 29/184 (15%), Positives = 55/184 (29%), Gaps = 19/184 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D AHIG+A I+ D L R R + +T D+ KI + A ++ +
Sbjct: 11 VNDVAHIGHAYTTIIADTLARFYRLQGEKTFF-----LTGTDEHGQKIEQAASAKNFTPK 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I++K + + + + NH + + + G Y+ E
Sbjct: 66 --EYADEISTKFKKLWDE---FEISYDYFIRTTDENHKLSVQKAFKKMFDKGDIYKGTYE 120
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK--RSTPMEPGWESPWG 209
+ S + K + + +K + W
Sbjct: 121 GFYCVSCESYFTQTQLINECHC----PDCGKKTQLLKEESYFFKLSKYQDQILKWYKEKE 176
Query: 210 RGRP 213
P
Sbjct: 177 PILP 180
>gi|293374654|ref|ZP_06620969.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
gi|292646744|gb|EFF64739.1| methionine--tRNA ligase [Turicibacter sanguinis PC909]
Length = 655
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 22/175 (12%), Positives = 47/175 (26%), Gaps = 20/175 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A++
Sbjct: 20 HIGTAYTTVASDAMARYKRSRGFD--VHF---LTGMDEHGQKIQEKAQEAGKEPQAYVDE 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+K + + + H + + + +G Y
Sbjct: 75 IADAAK---KLWEMMDITN--DDFIRTTEKRHEEMVEKIFAKFMENGDIYKGHYEGLYCT 129
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
S K + +V ++ K+ + +
Sbjct: 130 PCESYYTETQLVDGKCPDCGRDVKVVKEESYFFN-----MKKYADRLMEYYNANP 179
>gi|225856462|ref|YP_002737973.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
gi|225725786|gb|ACO21638.1| methionyl-tRNA synthetase [Streptococcus pneumoniae P1031]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|169832629|ref|YP_001694248.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|168995131|gb|ACA35743.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|15900681|ref|NP_345285.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|116516229|ref|YP_816183.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
gi|148989872|ref|ZP_01821166.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|161410751|ref|NP_358290.2| methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
gi|168484447|ref|ZP_02709399.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|194397413|ref|YP_002037433.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
gi|54039688|sp|P67581|SYM_STRR6 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|54042048|sp|P67580|SYM_STRPN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|14972263|gb|AAK74925.1| methionyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|116076805|gb|ABJ54525.1| methionyl-tRNA synthetase [Streptococcus pneumoniae D39]
gi|147924814|gb|EDK75898.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|172042338|gb|EDT50384.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1873-00]
gi|194357080|gb|ACF55528.1| methionyl-tRNA synthetase [Streptococcus pneumoniae G54]
gi|332076067|gb|EGI86533.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
gi|332203942|gb|EGJ18009.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
Length = 665
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|332815388|ref|XP_001149657.2| PREDICTED: ATP-binding cassette sub-family A member 12 isoform 2 [Pan
troglodytes]
Length = 2347
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1456 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1512
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1513 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1572
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1573 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1608
>gi|255327092|ref|ZP_05368168.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
gi|255296309|gb|EET75650.1| methionine--tRNA ligase [Rothia mucilaginosa ATCC 25296]
Length = 514
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 9/129 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A I DVL R R + V ++ TD + + + +
Sbjct: 19 PHIGHAYETIAADVLARFKRLDGFD--VRFMTG-TD-----EHGQKMQTTAEKLGKTAKE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ +F L +H + + + +G Y +
Sbjct: 71 LADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAGWYSVR 130
Query: 158 SIPNYGSFS 166
Y
Sbjct: 131 DEAYYAEDE 139
>gi|222825097|dbj|BAH22254.1| methionyl-tRNA synthetase [Wolbachia endosymbiont of Cadra
cautella]
Length = 143
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 25/134 (18%), Positives = 43/134 (32%), Gaps = 15/134 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ DV R ++ K V + T D+ KI + A+ +
Sbjct: 16 VNDKPHIGHAYTSLICDVTARFVKLAG--KNVKFT---TGTDEHGQKIEKAAKTKGIE-- 68
Query: 92 INDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
T + + F K + + H +I L + G Y +
Sbjct: 69 ----PKEFTDEISVTFRKLAELMNFNSDDFIRTTEERHEQAVIALWNRLEERGQIYLDSY 124
Query: 151 EIIFDTSSIPNYGS 164
+ Y
Sbjct: 125 SGWYSVRDEAFYQE 138
>gi|119590926|gb|EAW70520.1| ATP-binding cassette, sub-family A (ABC1), member 12, isoform CRA_a
[Homo sapiens]
Length = 1931
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1040 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1096
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1097 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1156
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1157 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1192
>gi|119590927|gb|EAW70521.1| ATP-binding cassette, sub-family A (ABC1), member 12, isoform CRA_b
[Homo sapiens]
Length = 2278
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1386 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1442
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1443 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1502
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1503 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1538
>gi|119590928|gb|EAW70522.1| ATP-binding cassette, sub-family A (ABC1), member 12, isoform CRA_c
[Homo sapiens]
Length = 2277
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1386 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1442
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1443 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1502
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1503 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1538
>gi|114583135|ref|XP_001149590.1| PREDICTED: ATP-binding cassette, sub-family A, member 12 isoform 1
[Pan troglodytes]
Length = 2285
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1386 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1442
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1443 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1502
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1503 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1538
>gi|114583131|ref|XP_001149722.1| PREDICTED: ATP-binding cassette sub-family A member 12 isoform 3 [Pan
troglodytes]
Length = 2603
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1704 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1760
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1761 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1820
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1821 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1856
>gi|114583129|ref|XP_516070.2| PREDICTED: ATP-binding cassette, sub-family A, member 12 isoform 4
[Pan troglodytes]
Length = 2595
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1704 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1760
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1761 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1820
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1821 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1856
>gi|14189735|gb|AAK54355.1| ATP-binding cassette transporter family A member 12 [Homo sapiens]
Length = 2277
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1386 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1442
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1443 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1502
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1503 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1538
>gi|30230335|gb|AAP21093.1| ABCA12 transporter subfamily A [Homo sapiens]
Length = 2595
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1704 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1760
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1761 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1820
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1821 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1856
>gi|23957299|gb|AAN40735.1|AF418105_1 ATP-binding cassette transporter family A member 12 [Homo sapiens]
Length = 2347
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1456 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1512
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1513 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1572
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1573 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1608
>gi|62988889|gb|AAY24276.1| unknown [Homo sapiens]
Length = 2413
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1704 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1760
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1761 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1820
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1821 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1856
>gi|30795238|ref|NP_775099.2| ATP-binding cassette sub-family A member 12 isoform a [Homo sapiens]
gi|269849713|sp|Q86UK0|ABCAC_HUMAN RecName: Full=ATP-binding cassette sub-family A member 12; AltName:
Full=ATP-binding cassette transporter 12;
Short=ATP-binding cassette 12
gi|225356536|gb|AAI56328.1| ATP-binding cassette, sub-family A (ABC1), member 12 [synthetic
construct]
Length = 2595
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1704 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1760
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1761 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1820
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1821 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1856
>gi|27881501|ref|NP_056472.2| ATP-binding cassette sub-family A member 12 isoform b [Homo sapiens]
Length = 2277
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1386 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1442
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1443 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1502
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1503 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1538
>gi|284175555|ref|ZP_06389524.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
gi|261602455|gb|ACX92058.1| arginyl-tRNA synthetase [Sulfolobus solfataricus 98/2]
Length = 625
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 14/34 (41%), Positives = 17/34 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
HIG+ R MI+ D L R LR V + N T
Sbjct: 124 HIGHLRNMILGDALARALRARGHSVNVRFYVNDT 157
>gi|229083353|ref|ZP_04215709.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
gi|228699960|gb|EEL52589.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-44]
Length = 660
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGYD--VHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|261405352|ref|YP_003241593.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
gi|261281815|gb|ACX63786.1| arginyl-tRNA synthetase [Paenibacillus sp. Y412MC10]
Length = 620
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
AHIG+ R + D L RL+R E V N IDD
Sbjct: 128 SAHIGHLRNSCIGDTLVRLMRKLGYEVEVH---NY--IDD 162
>gi|297669359|ref|XP_002812868.1| PREDICTED: LOW QUALITY PROTEIN: ATP-binding cassette sub-family A
member 12-like [Pongo abelii]
Length = 2517
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 34/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1626 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1682
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1683 AMGLGTLRNSSNSYPEIQISPSLYGTSKQTAFYANYHPSTEALVSAMWDFPGIDNMCLNT 1742
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1743 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1778
>gi|270292555|ref|ZP_06198766.1| methionine--tRNA ligase [Streptococcus sp. M143]
gi|270278534|gb|EFA24380.1| methionine--tRNA ligase [Streptococcus sp. M143]
Length = 679
Score = 42.4 bits (98), Expect = 0.15, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 89 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 205
>gi|289167689|ref|YP_003445958.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
gi|288907256|emb|CBJ22091.1| methionyl-tRNA synthetase [Streptococcus mitis B6]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|251809798|ref|ZP_04824271.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|282875420|ref|ZP_06284292.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|251806666|gb|EES59323.1| methionyl-tRNA synthetase [Staphylococcus epidermidis BCM-HMP0060]
gi|281295777|gb|EFA88299.1| methionine--tRNA ligase [Staphylococcus epidermidis SK135]
gi|329733027|gb|EGG69366.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU028]
Length = 656
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMISGIKNLWSKLEISNDDFIRTTEKRHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|168486199|ref|ZP_02710707.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
gi|183570793|gb|EDT91321.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC1087-00]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 43/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYY--VFY---LTGLDEHGQKIQQKAEEAGITPQTYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|149010582|ref|ZP_01831953.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|168490882|ref|ZP_02715025.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|168492944|ref|ZP_02717087.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|221231586|ref|YP_002510738.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225854300|ref|YP_002735812.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|147765063|gb|EDK71992.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|183574634|gb|EDT95162.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC0288-04]
gi|183577043|gb|EDT97571.1| methionyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|220674046|emb|CAR68559.1| methionyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225722945|gb|ACO18798.1| methionyl-tRNA synthetase [Streptococcus pneumoniae JJA]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|67458501|ref|YP_246125.1| arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
gi|75537032|sp|Q4UN98|SYR_RICFE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|67004034|gb|AAY60960.1| Arginyl-tRNA synthetase [Rickettsia felis URRWXCal2]
Length = 576
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGY 155
>gi|15458285|gb|AAK99500.1| Methionyl-tRNA synthetase [Streptococcus pneumoniae R6]
Length = 679
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 89 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 205
>gi|228999808|ref|ZP_04159381.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
gi|228759957|gb|EEM08930.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock3-17]
Length = 543
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 48/189 (25%), Gaps = 31/189 (16%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 18 HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ--------------MIYLIQNIIL 141
I ++F + L + H + +
Sbjct: 67 -KEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQAY 125
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + P+ +R + P +K E
Sbjct: 126 CETCTQFLPDRYVEG-VCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184
Query: 202 PGWESPWGR 210
+ +
Sbjct: 185 HFYFALHKF 193
>gi|116496032|ref|YP_807766.1| methyonyl-tRNA synthetase [Lactobacillus casei ATCC 334]
gi|116106182|gb|ABJ71324.1| methionyl-tRNA synthetase [Lactobacillus casei ATCC 334]
Length = 660
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A + +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKADKLGVTPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +Q K + H+ + +++ +I G Y +
Sbjct: 76 M---ATQIKQLWKMLEITN--DKFIRTTDKEHVEAVQTIVERLIKQGDVYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|296169876|ref|ZP_06851488.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
BAA-614]
gi|295895432|gb|EFG75134.1| methionine--tRNA ligase [Mycobacterium parascrofulaceum ATCC
BAA-614]
Length = 513
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 42/130 (32%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+A + D + R R + V + +T D+ K++E A E
Sbjct: 17 PHVGHAYEYVATDAIARFKRLDGFD--VRF---LTGTDEHGLKMMETAAAEGI------P 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + +N+ F + +L +H + + + G Y + +
Sbjct: 66 TAELARRNSDVFQRLQEKLNISFDRFIRTTDPDHHEASQEIWRRMEAAGDIYLDSYSGWY 125
Query: 155 DTSSIPNYGS 164
+
Sbjct: 126 SVRDERFFVE 135
>gi|283457812|ref|YP_003362406.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
gi|283133821|dbj|BAI64586.1| methionyl-tRNA synthetase [Rothia mucilaginosa DY-18]
Length = 514
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 9/129 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A I DVL R R + V ++ TD + + + +
Sbjct: 19 PHIGHAYETIAADVLARFKRLDGFD--VRFMTG-TD-----EHGQKMQTTAEKLGKTAKE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ +F L +H + + + +G Y +
Sbjct: 71 LADENSARFKAMNDALNISYDRFIRTTDPDHYVASQAIWKRMEENGDIYLDKYAGWYSVR 130
Query: 158 SIPNYGSFS 166
Y
Sbjct: 131 DEAYYAEDE 139
>gi|269957514|ref|YP_003327303.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
gi|269306195|gb|ACZ31745.1| methionyl-tRNA synthetase [Xylanimonas cellulosilytica DSM 15894]
Length = 541
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 20/120 (16%), Positives = 43/120 (35%), Gaps = 12/120 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V D HIG+A + DV+ R + ++ V + +T D +K++ A S
Sbjct: 18 VNDAPHIGHAYTTVAADVVTRW--HRQRQEDVWF---LTGTDEHGEKVLRTATANGVSPQ 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + ++ + H + +Q++ G Y+ + E
Sbjct: 73 --EWADRLVESAWKPVLETLDVRN--DDFIRTTEPRHESAVQAFLQDLHDKGEIYQGSYE 128
>gi|225861309|ref|YP_002742818.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|298229840|ref|ZP_06963521.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19F]
gi|298254148|ref|ZP_06977734.1| methionyl-tRNA synthetase [Streptococcus pneumoniae str. Canada
MDR_19A]
gi|225726725|gb|ACO22576.1| methionyl-tRNA synthetase [Streptococcus pneumoniae Taiwan19F-14]
gi|327390144|gb|EGE88487.1| methionyl-tRNA synthetase [Streptococcus pneumoniae GA04375]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|303255799|ref|ZP_07341840.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|303260254|ref|ZP_07346225.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|303264128|ref|ZP_07350049.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
gi|302597183|gb|EFL64288.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS455]
gi|302638578|gb|EFL69042.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP-BS293]
gi|302646533|gb|EFL76759.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS397]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|297543649|ref|YP_003675951.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
gi|296841424|gb|ADH59940.1| methionyl-tRNA synthetase [Thermoanaerobacter mathranii subsp.
mathranii str. A3]
Length = 632
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 57/419 (13%), Positives = 108/419 (25%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI A+++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAKEKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKDLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SEYEGWYCT 128
Query: 135 LIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ S ++ + + +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K S + G G+ +
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTDNDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDLGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFGGILPKLSQKEEVDDDLITTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|303261460|ref|ZP_07347408.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|303266261|ref|ZP_07352152.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
gi|303268700|ref|ZP_07354490.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|301801632|emb|CBW34330.1| methionyl-tRNA synthetase [Streptococcus pneumoniae INV200]
gi|302637594|gb|EFL68081.1| methionyl-tRNA synthetase [Streptococcus pneumoniae SP14-BS292]
gi|302641760|gb|EFL72117.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS458]
gi|302644191|gb|EFL74447.1| methionyl-tRNA synthetase [Streptococcus pneumoniae BS457]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|291166390|gb|EFE28436.1| methionine--tRNA ligase [Filifactor alocis ATCC 35896]
Length = 642
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 40/400 (10%), Positives = 112/400 (28%), Gaps = 22/400 (5%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPS--IPIND 94
HIG+ + D + R R+ + V + +T D +KI ++AR+ I +++
Sbjct: 20 HIGHTYTTVAADAISRYKRFAGFD--VRF---LTGTDEHGEKIQKKAREMGLEPIIYLDN 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
IS I + + H+ R ++ + YE + +
Sbjct: 75 MISDIKKLWNVMEISYDDFIRTTESRHEERVQKIFQKLYDQGDIYLGE---YEGHYCVEC 131
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ + ++ +++ ++ + Y + P + P R
Sbjct: 132 EAFWTESQLEDNKCPDCHREVESKKEQSYFFRLSKYQDRLIEYYEQHPDFCFPESRKNEM 191
Query: 215 WH------IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
+ +E ++S + +I+ + + T + +
Sbjct: 192 LNNFLKKGLEDLSVSRTSFDWGVKVPFDERHVIYVWIDALCNYITALGYPDNTKEMQAYW 251
Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLT 328
K I L+ + L + +
Sbjct: 252 PANMQIVGKEIMRFHTIIWPALLMALDLPLPQKVYGHGWILFSDDKMSKSKGNVVYPEPI 311
Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
+ + + + T ++ L ++ ++ +
Sbjct: 312 IERYGIDALKYFLLREFVFGQDG-NYTNRGFLTRINSDLVNDLGNLLSRTVSMVE--KYT 368
Query: 389 AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
I+ ++++ I +L ++ ++ +F+ A
Sbjct: 369 DGIVMEYNASTEFDESLETIINELFEKFDEAMENMQFNEA 408
>gi|298503207|ref|YP_003725147.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
gi|298238802|gb|ADI69933.1| methionine--tRNA ligase [Streptococcus pneumoniae TCH8431/19A]
Length = 679
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 89 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 205
>gi|227532988|ref|ZP_03963037.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
gi|227189389|gb|EEI69456.1| methionyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
ATCC 25302]
Length = 660
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A + +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKADKLGVTPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +Q K + H+ + +++ +I G Y +
Sbjct: 76 M---ATQIKQLWKMLEITN--DKFIRTTDKEHVEAVQTIVERLIKQGDVYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|329925160|ref|ZP_08280103.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
gi|328939993|gb|EGG36326.1| arginine--tRNA ligase [Paenibacillus sp. HGF5]
Length = 620
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 5/40 (12%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
AHIG+ R + D L RL+R E V N IDD
Sbjct: 128 SAHIGHLRNSCIGDTLVRLMRKLGYEVEVH---NY--IDD 162
>gi|307708494|ref|ZP_07644959.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
gi|307615410|gb|EFN94618.1| methionyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
Length = 665
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|289577361|ref|YP_003475988.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
gi|289527074|gb|ADD01426.1| methionyl-tRNA synthetase [Thermoanaerobacter italicus Ab9]
Length = 633
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 57/419 (13%), Positives = 107/419 (25%), Gaps = 86/419 (20%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP-- 91
D HIG++ + D + R R + V + +T D+ KI A+++ S
Sbjct: 16 DKLHIGHSYTTVAADAMARFKRLTGYD--VKF---LTGTDEHGQKIQRIAKEKGMSPKEY 70
Query: 92 ---INDAISII--------------TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
I + I + T K ++ V+ + +
Sbjct: 71 VDGIVEWIKNLWKIMDISYDQFIRTTDKYHEEIVQKIFTKLYEKGDIYK--SEYEGWYCT 128
Query: 135 LIQNIILH------GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ S ++ + + +
Sbjct: 129 PCESFWTESQLVDGKCPDCGRPVERVKEEGYFFKLSKYGDRLLQYYDEHPDFIQPESRRN 188
Query: 189 ADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSH 225
K S + G G+
Sbjct: 189 EMINFIKSGLEDLFVSRSSFDWGIKVPFDPKHVIYVWIDALSNYITALGYSTYHDDDFKK 248
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G +++ H A D +G+L LEG KMSKS GN
Sbjct: 249 YW--PADVHLVGKEIMRFHTIIWPAMLMALD--LPLPKKVFGHGWLILEGGKMSKSKGNV 304
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ EL+ + + + + + + +T E
Sbjct: 305 VDPKELVSKYGVDAVRYFLLREVPFGADGVFSNEALINRINSDLANDFGNLLSRTVTMIE 364
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ K +D P + + L +A+ + KL R + K D
Sbjct: 365 KYFGGILPKPSQKEEVDDDLINTAQNLPKTVEEYMDKLQFSNALIEIWKLVRRANKYID 423
>gi|256833172|ref|YP_003161899.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
gi|256686703|gb|ACV09596.1| methionyl-tRNA synthetase [Jonesia denitrificans DSM 20603]
Length = 538
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 10/22 (45%), Positives = 12/22 (54%)
Query: 35 VYDFAHIGNARPMIVFDVLYRL 56
V D HIG+A + DVL R
Sbjct: 17 VNDAPHIGHAYTTVAADVLTRW 38
>gi|239630434|ref|ZP_04673465.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|301067585|ref|YP_003789608.1| methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
gi|239526717|gb|EEQ65718.1| methyonyl-tRNA synthetase [Lactobacillus paracasei subsp. paracasei
8700:2]
gi|300439992|gb|ADK19758.1| Methyonyl-tRNA synthetase [Lactobacillus casei str. Zhang]
Length = 660
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A + +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKADKLGVTPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +Q K + H+ + +++ +I G Y +
Sbjct: 76 M---ATQIKQLWKMLEITN--DKFIRTTDKEHVEAVQTIVERLIKQGDVYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|191639512|ref|YP_001988678.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
gi|190713814|emb|CAQ67820.1| Methionyl-tRNA synthetase [Lactobacillus casei BL23]
gi|327383610|gb|AEA55086.1| Methionyl-tRNA synthetase [Lactobacillus casei LC2W]
gi|327386801|gb|AEA58275.1| Methionyl-tRNA synthetase [Lactobacillus casei BD-II]
Length = 660
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A + +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKADKLGVTPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +Q K + H+ + +++ +I G Y +
Sbjct: 76 M---ATQIKQLWKMLEITN--DKFIRTTDKEHVEAVQTIVERLIKQGDVYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|239946988|ref|ZP_04698741.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
gi|239921264|gb|EER21288.1| arginyl-tRNA synthetase [Rickettsia endosymbiont of Ixodes
scapularis]
Length = 576
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGY 155
>gi|229007362|ref|ZP_04164960.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
gi|228753893|gb|EEM03333.1| Methionyl-tRNA synthetase 2 [Bacillus mycoides Rock1-4]
Length = 545
Score = 42.4 bits (98), Expect = 0.16, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 48/189 (25%), Gaps = 31/189 (16%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA+QE +
Sbjct: 18 HLGHVAGLLPGDILARYYRTKG--ENVLYVSGSDCNGT----PIAIRAKQEGVTA----- 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ--------------MIYLIQNIIL 141
I ++F + L + H + +
Sbjct: 67 -KEIADYYHEEFERCFKELGFTYDCYTRTDAQHHHETVQKIFLRLLEEGFIYKKTVEQAY 125
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ + + P+ +R + P +K E
Sbjct: 126 CETCTQFLPDRYVEG-VCPHCHEPARGDQCDACSAILDPLDLLEKKCKLCGNTPAVKETE 184
Query: 202 PGWESPWGR 210
+ +
Sbjct: 185 HFYFALHKF 193
>gi|332359054|gb|EGJ36875.1| methionine--tRNA ligase [Streptococcus sanguinis SK49]
Length = 665
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 60/181 (33%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + S
Sbjct: 21 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEVGISPQAYVDG 75
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLARDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 136 FTESQLAEVFRDENGKVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDFITP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|301799802|emb|CBW32371.1| methionyl-tRNA synthetase [Streptococcus pneumoniae OXC141]
Length = 665
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K Q + + ++ +
Sbjct: 75 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKAHPEF 191
>gi|182683707|ref|YP_001835454.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
gi|182629041|gb|ACB89989.1| methionine--tRNA ligase [Streptococcus pneumoniae CGSP14]
Length = 679
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 89 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + + + ++ + L K + ++S P
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPEFITP 208
Query: 214 G 214
Sbjct: 209 D 209
>gi|157964131|ref|YP_001498955.1| arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
gi|157843907|gb|ABV84408.1| Arginyl-tRNA synthetase [Rickettsia massiliae MTU5]
Length = 578
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 130 PT--GPMHIGHARGAVYGDVLARILQKVGY 157
>gi|149188165|ref|ZP_01866460.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
gi|148838153|gb|EDL55095.1| methionyl-tRNA synthetase [Vibrio shilonii AK1]
Length = 688
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 50/433 (11%), Positives = 109/433 (25%), Gaps = 48/433 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V N DD I+ +A+Q S
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN------VVNFICADDAHGTPIMLKAQQMGISPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 77 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPIMK 191
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGSLQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 251
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ +++ + + Y + +
Sbjct: 252 KDKFFYVWLDAPIGYMGSFKNLCDKRDDLDFEEYWNKDSNTELYHFIGKDIVYFHSLFW- 310
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 311 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSENFAEPELYNEFV 427
Query: 428 --ADYIRKQLESK 438
AD I +L
Sbjct: 428 AAADRI-AELYEA 439
>gi|303241037|ref|ZP_07327547.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
gi|302591462|gb|EFL61200.1| methionyl-tRNA synthetase [Acetivibrio cellulolyticus CD2]
Length = 643
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 39/151 (25%), Gaps = 11/151 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + V +T D+ KI +A + +
Sbjct: 17 DKLHIGHSYTTVAADAVARYKRLKGYD-----VMFLTGTDEHGQKIQRKAEAKGVTPK-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + K + Q I+ + E
Sbjct: 70 QYVDEIVDG-IKDLWKLMKITNDRFIRTTDKNHEEAVQKIFKKLYDQGDIYKSEYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + + ++
Sbjct: 129 TPCESFWTKTQLVDGKCPDCGREVELTKEES 159
>gi|301630146|ref|XP_002944188.1| PREDICTED: leucyl-tRNA synthetase-like [Xenopus (Silurana)
tropicalis]
Length = 908
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
D + Y C Y H+G+ R + D+L R LR
Sbjct: 29 DAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGYN 72
>gi|242241575|ref|ZP_04796020.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
gi|242234956|gb|EES37267.1| methionyl-tRNA synthetase [Staphylococcus epidermidis W23144]
Length = 656
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|225551876|ref|ZP_03772819.1| lysyl-tRNA synthetase [Borrelia sp. SV1]
gi|225371671|gb|EEH01098.1| lysyl-tRNA synthetase [Borrelia sp. SV1]
Length = 521
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 46/395 (11%), Positives = 101/395 (25%), Gaps = 62/395 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R LR V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALRDSG--SKVRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + + T+ + + + P+ I +
Sbjct: 75 KVPKNMPEQELLTTYLRQAITRVPDTRSYKTSYAKANEIEFEKYLPIVGINPEFIDQSKQ 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+ +A + + + K++E + + +
Sbjct: 135 YTSNAYANQIKFALDHKKELSEALNEYRTSKLEENWYPISIFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLE-------------- 293
+++ + + G K+S S+G+ I++ ++LE
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEVYTPEVTRFLFAAT 310
Query: 294 -TKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVL 352
S+ VI++ + E + + + S P+
Sbjct: 311 KPNTEFSISFDLDVIKIYEDYDKFERIYYGVEDVKEEKKRAFKRIYELSQP---YMPSKR 367
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+S I + + K + L
Sbjct: 368 IPYQIGFRHLSVICQIFE--NNINKILNYLKNVQE 400
>gi|171695362|ref|XP_001912605.1| hypothetical protein [Podospora anserina S mat+]
gi|170947923|emb|CAP60087.1| unnamed protein product [Podospora anserina S mat+]
Length = 623
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 28/197 (14%), Positives = 47/197 (23%), Gaps = 31/197 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE-------RAR 84
P V + H+GN ++ DV R R G V +V TD E RAR
Sbjct: 26 PYVNNVPHLGNIIGSVLSADVFARFWRGRGG--NVLFVGG-TD------EFGTTTSLRAR 76
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHG 143
+E A + K + H + + + G
Sbjct: 77 EEGV------APQELCDKYHKIHKDVYEWFNISFDIFGRTTNDRHTEITHDIFKELWGEG 130
Query: 144 HA-YEANNEIIFDTSSIPNYGSFSRRKIDEQ--KMGTRVPEKYHKKNPADFILWKRSTPM 200
+ ++ + + E + L
Sbjct: 131 LIEIRDSEQLWCEECKGFVFDRLVEGTCPECGSEEARGDQCGECDWVFDITELV----EP 186
Query: 201 EPGWESPWGRGRPGWHI 217
+ RP H+
Sbjct: 187 KCKIHGGRPALRPSKHL 203
>gi|27469211|ref|NP_765848.1| methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57866027|ref|YP_187724.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|293366132|ref|ZP_06612819.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|38258352|sp|Q8CQU3|SYM_STAES RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|81675420|sp|Q5HRR5|SYM_STAEQ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|27316760|gb|AAO05935.1|AE016751_230 methionyl-tRNA synthetase [Staphylococcus epidermidis ATCC 12228]
gi|57636685|gb|AAW53473.1| methionyl-tRNA synthetase [Staphylococcus epidermidis RP62A]
gi|291319726|gb|EFE60085.1| methionine-tRNA ligase [Staphylococcus epidermidis M23864:W2(grey)]
gi|329723953|gb|EGG60478.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU144]
gi|329737889|gb|EGG74117.1| methionine--tRNA ligase [Staphylococcus epidermidis VCU045]
Length = 656
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|319399647|gb|EFV87901.1| methionyl-tRNA synthetase [Staphylococcus epidermidis FRI909]
Length = 656
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 41/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTEL----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMISGIKNLWSKLEISNDDFIRTTEERHKQVVEKVFERLLKQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|253753801|ref|YP_003026942.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
gi|251820047|emb|CAR46270.1| methionyl-tRNA synthetase [Streptococcus suis P1/7]
gi|292558559|gb|ADE31560.1| Methionyl-tRNA synthetase, class Ia [Streptococcus suis GZ1]
Length = 667
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R E V Y +T +D+ KI E+A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIEEKAKEAGLTPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K + + A + + + Y ++E
Sbjct: 75 MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + + + L K + + + +P
Sbjct: 135 FTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|295677677|ref|YP_003606201.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295437520|gb|ADG16690.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 863
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 11/153 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R + DV+YR LR V D E+ ++ N +
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD---AFGMPAENAAMANNVPPAQW 100
Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFDT 156
T N K + + AT + +L ++ G AY+ + +D
Sbjct: 101 TYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVNWDP 160
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + G V ++
Sbjct: 161 VDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 193
>gi|295094201|emb|CBK83292.1| methionyl-tRNA synthetase [Coprococcus sp. ART55/1]
Length = 678
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 17/169 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R+ + V + +T D+ KI +A +
Sbjct: 19 PHIGNTYEIVLADSIARYKRFAGYD--VRF---MTGTDEHGQKIENKAFEN------MQT 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN--NEI 152
+ + + + + H Q+ + + + G Y+ + +
Sbjct: 68 PKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGKY 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
S G K + + ++ K +E
Sbjct: 128 CTPCESFFTDGQLIDGKCPDCGRPVQEAKEEAYFFKMSKYQDKLMKHIE 176
>gi|288932340|ref|YP_003436400.1| lysyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
gi|288894588|gb|ADC66125.1| lysyl-tRNA synthetase [Ferroglobus placidus DSM 10642]
Length = 491
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T H GN R +I+ D + R + G+ V YV
Sbjct: 24 GITPSGHIHFGNLREIIIADAVRRAVEEKGGKAEVIYV 61
>gi|113953658|ref|YP_730540.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|113881009|gb|ABI45967.1| methionyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 514
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 32/178 (17%), Positives = 55/178 (30%), Gaps = 16/178 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ I D L R R E V +V T +D+ KI A + S
Sbjct: 12 VNDKPHLGSTYTTIACDALARFQRLEGHE--VVFV---TGVDEHGQKIQRTAADQGISPI 66
Query: 92 INDAISIITSKNTQQFVK----DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
D + IT+ + + + + + +P H P + +
Sbjct: 67 --DHCNRITASYEKAWNEWDISNDRFVRTTSPRHLPLVQQFFQRCEEAGDIRSGRQTGWY 124
Query: 148 ANNEIIF--DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
F D + N +K E + + + K+S + P
Sbjct: 125 CVGCEEFKDDPAEAVNPTCSIHQKPLEWRDEENLFFCLSHYQEQIEAIIKQSDFIAPA 182
>gi|223933652|ref|ZP_03625630.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
gi|330833043|ref|YP_004401868.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
gi|223897682|gb|EEF64065.1| methionyl-tRNA synthetase [Streptococcus suis 89/1591]
gi|329307266|gb|AEB81682.1| methionyl-tRNA synthetase [Streptococcus suis ST3]
Length = 667
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R E V Y +T +D+ KI E+A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIEEKAKEAGLTPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K + + A + + + Y ++E
Sbjct: 75 MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + + + L K + + + +P
Sbjct: 135 FTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|146321108|ref|YP_001200819.1| methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|253751976|ref|YP_003025117.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
gi|145691914|gb|ABP92419.1| Methionyl-tRNA synthetase [Streptococcus suis 98HAH33]
gi|251816265|emb|CAZ51893.1| methionyl-tRNA synthetase [Streptococcus suis SC84]
Length = 667
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 54/181 (29%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R E V Y +T +D+ KI E+A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIEEKAKEAGLTPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K + + A + + + Y ++E
Sbjct: 75 MAVGVKELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + + + L K + + + +P
Sbjct: 135 FTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194
Query: 214 G 214
Sbjct: 195 A 195
>gi|317012812|gb|ADU83420.1| methionyl-tRNA synthetase [Helicobacter pylori Lithuania75]
Length = 650
Score = 42.4 bits (98), Expect = 0.17, Method: Composition-based stats.
Identities = 21/152 (13%), Positives = 42/152 (27%), Gaps = 15/152 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A ++ D L + E V + +T D+ KI E +
Sbjct: 13 VNDIPHIGHAYTTLIADTLKKYYTLQGEE--VFF---LTGTDEHGQKI------EQSASL 61
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + + F + H + + + G Y+
Sbjct: 62 RNQSPKAYADSISAIFKDQWDFFNLDYDGFIRTTDSEHQKCVQNAFEIMFEKGDIYKGAY 121
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ S +++ + +
Sbjct: 122 SGYYCVSCESYCAISKADNTNDKVLCPDCLRE 153
>gi|187925353|ref|YP_001896995.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
gi|187716547|gb|ACD17771.1| leucyl-tRNA synthetase [Burkholderia phytofirmans PsJN]
Length = 944
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 130 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 178
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 179 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 238
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + G V ++
Sbjct: 239 WDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 274
>gi|15789599|ref|NP_279423.1| methionyl-tRNA synthetase [Halobacterium sp. NRC-1]
gi|169235311|ref|YP_001688511.1| methionyl-tRNA synthetase [Halobacterium salinarum R1]
gi|25009397|sp|Q9HSA4|SYM_HALSA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|10579953|gb|AAG18903.1| methionine-tRNA synthetase [Halobacterium sp. NRC-1]
gi|167726377|emb|CAP13158.1| methionine--tRNA ligase [Halobacterium salinarum R1]
Length = 689
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 16/48 (33%), Positives = 19/48 (39%), Gaps = 8/48 (16%)
Query: 30 VCG---PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
CG PT HIG+ R + D R LR E +V TD
Sbjct: 15 TCGLPYPT--GDLHIGHLRTYVSGDAFSRALRKLGQETV--FVSG-TD 57
>gi|327403508|ref|YP_004344346.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
gi|327319016|gb|AEA43508.1| methionyl-tRNA synthetase [Fluviicola taffensis DSM 16823]
Length = 685
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 25/157 (15%), Positives = 41/157 (26%), Gaps = 24/157 (15%)
Query: 40 HIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
H+G+ A + D+ R LR + V ++ IT RA++E +
Sbjct: 20 HLGHVAGVYLPADIFVRFLRSNGHD--VAFICGSDEHGAAIT-------LRAKKEGIT-- 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
I K Q + H+ A HI + + G E
Sbjct: 69 ----PREIVDKYNQIIGDSFKQFGISFDIFHRTSAQIHIETAQDFFKVLEEKGKFIEETT 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D +K
Sbjct: 125 EQYYDEEYQQFLADRYITGECPNCQNPNAYGDQCEKC 161
>gi|15678615|ref|NP_275730.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3122905|sp|O26687|SYM_METTH RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|2621666|gb|AAB85093.1| methionyl-tRNA synthetase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 651
Score = 42.4 bits (98), Expect = 0.18, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 41/167 (24%), Gaps = 19/167 (11%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQ 85
Y GPT H+G+ R I D+ R R V +V TD + I +A
Sbjct: 12 YANGPT-----HLGHLRSTYIPADIYARYRRLRG--DDVLFVCA-TD-EHGTPIAVKAEA 62
Query: 86 EHPSIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E + ++ + D + H + G
Sbjct: 63 EG------RTPLEVATRYHEMIRGDLERCDISFDSFTRTTDELHHEIAQKFFLKLYEKGF 116
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
YE + + ++ + +
Sbjct: 117 IYEKDIKQLYCGDCQRFLPDRYVEGTCPYCGSEGARGDHCEGCGRHL 163
>gi|163839798|ref|YP_001624203.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
gi|162953274|gb|ABY22789.1| methionyl-tRNA synthetase [Renibacterium salmoninarum ATCC 33209]
Length = 529
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 15/167 (8%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
HIG+A + D L R R + V Y+ TD I K+ + A +E +
Sbjct: 23 PHIGHAYEYVSADALARFKRLDGFD--VFYMSG-TDEHGI--KVQQAAEKEGVT------ 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ + H L + + +G Y +
Sbjct: 72 PLELVDRNSAAIRAVHDLVESSYDRFIRTTEPEHYLASQELWRRMEANGDIYLDKYTGWY 131
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
Y + E + ++ S E
Sbjct: 132 SVRDEAYYTDEQTELRADGIRYAIETETEVTWTEEESYFFRLSNYQE 178
>gi|119953437|ref|YP_945646.1| lysyl-tRNA synthetase [Borrelia turicatae 91E135]
gi|119862208|gb|AAX17976.1| class 1 lysyl-tRNA synthetase [Borrelia turicatae 91E135]
Length = 520
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 49/360 (13%), Positives = 85/360 (23%), Gaps = 62/360 (17%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV---------------------- 69
G T HIGN R +I D++ R L+ K V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDA--NKNVRFIYSWDNYDVFRKVPKNMPDQELL 86
Query: 70 -----RNITDI-DDKIIER--ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
+ IT + D K + AR I I + Q +K +
Sbjct: 87 TTHLRQAITRVPDTKTNQSSYARANEVEFEKYLPIVGIKPEFINQSLKYMSSD------- 139
Query: 122 QPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE 181
I ++ + + S + +
Sbjct: 140 YSNQIKFALDHKDEIAKVLNKYRTTKLADNWYP-ISIFCTKCDRDTTTVKNYNHCYSIEY 198
Query: 182 KYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
N L K P W W +++ GK GG D
Sbjct: 199 HCECGNKESLDLRKTWAAKLP-WRIDWPMRWKYENVD-----FEPAGKDHHSSGGSFD-- 250
Query: 242 FPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRS 301
+ + G K+S S+G +++ ++LE
Sbjct: 251 ------TSIEIVKIFGGTPPITFQYDFISIKGRGGKISSSSGEVVSLKDVLEI------- 297
Query: 302 WPAPVIRLAMLMTHYREPIDFTVQRL-TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ V R T + + K+ + I + A
Sbjct: 298 YTPEVTRFLFASTKPNTEFSISFDLDVIKIYEDYDKFERVYYGIDDIKESKKEAFKRIYE 357
>gi|332210113|ref|XP_003254150.1| PREDICTED: ATP-binding cassette sub-family A member 12 [Nomascus
leucogenys]
Length = 2559
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 33/156 (21%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1668 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1724
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + ++ TS + + +
Sbjct: 1725 AMGLGTLRNSSNSYPEIQIAPSLYGTSEQTAFYANYHPSTEALVSAMWNFPGVDNMCLNT 1784
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L + W + CS
Sbjct: 1785 SDLQCLNKDSLEKWNTSGEPITNFGVCSCSENVQEC 1820
>gi|307703587|ref|ZP_07640529.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
gi|307622994|gb|EFO01989.1| methionyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
Length = 665
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 75 MAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 191
>gi|302833559|ref|XP_002948343.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
nagariensis]
gi|300266563|gb|EFJ50750.1| hypothetical protein VOLCADRAFT_58186 [Volvox carteri f.
nagariensis]
Length = 643
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 11/153 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A P I DV R R K V + +T D +KI A +
Sbjct: 78 VNAAPHMGSAYPTIAADVASRFQRLLG--KRVRF---LTGTDEHGEKI--AAAASGRGLS 130
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I ++ T + K + T + R + ++ A +
Sbjct: 131 PQEHCDDIVAQYTDLWDKLDIQYDRFVRTTESRLAELVVDVLVRCWERGDIYSA-DYEGW 189
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
D R + + ++ +
Sbjct: 190 YCVDCEEFKGQSESQPRGCPTHRKPCQHRKEAN 222
>gi|293365638|ref|ZP_06612347.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
gi|291316006|gb|EFE56450.1| methionine-tRNA ligase [Streptococcus oralis ATCC 35037]
Length = 679
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 44/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 89 MAVGVKELWELLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 205
>gi|163814866|ref|ZP_02206254.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
gi|158449805|gb|EDP26800.1| hypothetical protein COPEUT_01017 [Coprococcus eutactus ATCC 27759]
Length = 678
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 22/169 (13%), Positives = 50/169 (29%), Gaps = 17/169 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R+ + V + +T D+ KI +A +
Sbjct: 19 PHIGNTYEIVLADSIARYKRFAGYD--VRF---MTGTDEHGQKIENKAFEN------MQT 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN--NEI 152
+ + + + + H Q+ + + + G Y+ + +
Sbjct: 68 PKEFVDETSGEIKRIWDLMNTSYDKFIRTTDDYHEKQVQKIFKKLYDQGDIYKGHYVGKY 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
S G K + + ++ K +E
Sbjct: 128 CTPCESFFTDGQLIDGKCPDCGRPVQEAKEEAYFFKMSKYQDKLMKHIE 176
>gi|104780203|ref|YP_606701.1| methionine--tRNA ligase [Pseudomonas entomophila L48]
gi|95109190|emb|CAK13887.1| putative Methionine--tRNA ligase [Pseudomonas entomophila L48]
Length = 662
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 24/148 (16%), Positives = 41/148 (27%), Gaps = 19/148 (12%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEH 87
PT H+G+ P I DVL R+L V Y N T + + A +E
Sbjct: 120 PTPNGDLHLGHLSGPYIAGDVLKRVL--AGAGAQVFYGSGRDDNQTYV----VTCAAREG 173
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIILHGHA 145
S S + + + + + +Q + G
Sbjct: 174 FS------PSECADHYAEAIRETWQGYGIDMDFFITPDNQGEYADFVHHYLQRLYDQGLI 227
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
Y + + D + +F
Sbjct: 228 YAKDTPVFVDNQGNALHEAFIHGGCPHC 255
>gi|11498815|ref|NP_070044.1| lysyl-tRNA synthetase [Archaeoglobus fulgidus DSM 4304]
gi|3183169|sp|O29052|SYK_ARCFU RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|2649372|gb|AAB90029.1| lysyl-tRNA synthetase (lysS) [Archaeoglobus fulgidus DSM 4304]
Length = 493
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G + H+GN R M+ D + R L GE + Y+
Sbjct: 23 GISPSGHIHLGNLREMVTADAIRRALLDAGGEAKIVYI 60
>gi|85707713|ref|ZP_01038779.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
gi|85689247|gb|EAQ29250.1| arginyl-tRNA synthetase [Erythrobacter sp. NAP1]
Length = 583
Score = 42.0 bits (97), Expect = 0.18, Method: Composition-based stats.
Identities = 53/341 (15%), Positives = 90/341 (26%), Gaps = 42/341 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD----IDDKIIERARQEHP 88
PT H+G+ R +V D L LL E Y N D +D + R+
Sbjct: 137 PT--GPMHMGHCRGAVVGDALASLLELAGHEVTREYYIN--DAGGQVD--TLARSAHLRY 190
Query: 89 SIPINDAISIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + I I + R + Y +
Sbjct: 191 REALGENIGEIPEGYYPGAYLIPIGEYLAQEVGEKYRDAPEEEWLPYFRAEAVEKMMDLI 250
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG---- 203
++ + + + + ++ K P E
Sbjct: 251 KSDLALLGIHHDVFASEAALHAAGKPDEAEKWLREHDLVYDGVLEAPKGKAPPEDWEPVE 310
Query: 204 ---WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG-------LDLIFPHHENEIAQSC 253
+ S I+ S Y G H +D+ H + +
Sbjct: 311 LPLFRSTKFGDDQDRPIKKSDGKWTYFGADLAYHMQKAADADELIDIWGADHAGTVKRIK 370
Query: 254 CA------DRIEKTANIWIHNGFLNLEG----RKMSKSNGNFITINELLETKKFGGRSWP 303
A + + T + L KMSK +GNFITI +++E
Sbjct: 371 AAVAALSEGKGKPTPFDVKLVQMVQLMRGGEPVKMSKRSGNFITIADMVEEVGK------ 424
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
V+R ML ++F ++ EA W
Sbjct: 425 -DVVRFTMLTRKPEAQMEFDFAKVVEASKDNPVWYVQYAHA 464
>gi|94987625|ref|YP_595558.1| methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
gi|94731874|emb|CAJ55237.1| Methionyl-tRNA synthetase [Lawsonia intracellularis PHE/MN1-00]
Length = 651
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 56/420 (13%), Positives = 100/420 (23%), Gaps = 78/420 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV DVL R Y + + +T D +KII+ A S
Sbjct: 14 VNARPHLGHAYSTIVADVLQRF--YSILGEKTFF---LTGTDEHGEKIIQAAEAAGYSTQ 68
Query: 92 INDA---------------------------ISIITSKNTQQFVKDTTRLACLAPTHQP- 123
K Q +
Sbjct: 69 EFVDSISRQFQNLWPQLNITYDAFIRTTDLQHKEAVQKFLQHIYDAGDIYFGEFGGYYCL 128
Query: 124 -RATNHIPQMIYLIQNIILHGHAYEANNEIIF-----DTSSIPNYGSFSRRKIDEQKMGT 177
+ + + + F S + Y I ++
Sbjct: 129 GCERFYTEKELEDGFCPQHKTKPEFIEEQNYFFKMSKYLSWLIEYLQQHPNLIRPERYKN 188
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPW-----GRGRPGWHIECSAMSSHYLGKVFD 232
V D + + T + G E P+ I + + G+ +
Sbjct: 189 EVLSLLESGALEDLCISRPKTRLPWGIELPFDTNYVCYVWFDALISYISALNWPTGEYYK 248
Query: 233 I-----HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
H D++ PH A +G+ KMSKS N I
Sbjct: 249 TFWPGEHLIAKDILKPHAVFWPTMLKSAG--LPMYKHLNVHGYWLNRDTKMSKSLNNAID 306
Query: 288 INELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
L++ + ++ + + + + L+ +
Sbjct: 307 PITLIQQYGLDAFRYFLIREMNFGSDANFSEESLKHRINSDLANDLGNLFNRVLSMSTKY 366
Query: 334 LSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
+ D L ++ A++AL +L R K D
Sbjct: 367 FKSLLPEAKEYTEPDMQLRQLTENAQYNYIQLMKNMRLSQAVEALWELIRALNKYIDTQA 426
>gi|91785203|ref|YP_560409.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|123358460|sp|Q13U82|SYL_BURXL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|91689157|gb|ABE32357.1| leucyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 863
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 193
>gi|323136445|ref|ZP_08071527.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
gi|322398519|gb|EFY01039.1| methionyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
Length = 520
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D R R + V +V T +D+ K+ A +E +
Sbjct: 18 GAPHIGHAYERIATDAFARFKRLDGYD--VLFV---TGMDEHGQKMQRTAEKEGLT---- 68
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + QF + L A H ++ + + + +G Y +
Sbjct: 69 --PQGLADRTAAQFARMGEALNARADDIVRTTQERHKETVLEIWRRMEANGDIYLSKYSG 126
Query: 153 IFDTSSIPNYGS 164
+ Y
Sbjct: 127 WYSVRDEAYYDE 138
>gi|146340771|ref|YP_001205819.1| methionyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
gi|146193577|emb|CAL77594.1| Methionyl-tRNA synthetase (EC 6.1.1.10) [Bradyrhizobium sp. ORS278]
Length = 705
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R K V + +T D+ K+++ A+ E +
Sbjct: 207 GSPHIGHAYEAIATDAIARFARLDG--KDVFF---LTGTDEHGLKMVQTAQNEGLT---- 257
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
S + ++N +F + RL H + + ++ +G Y
Sbjct: 258 --PSELAARNAGRFREMDERLNVSFDRFIRTTEPAHHKSVQAIWTRMLENGDIYADTYSG 315
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 316 WYSVRDEAYYAEEE 329
>gi|145590523|ref|YP_001152525.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|166231633|sp|A4WHK6|SYL_PYRAR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|145282291|gb|ABP49873.1| leucyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 945
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYY 61
HIG+ R ++ DVL R R+
Sbjct: 47 GAIHIGHGRTYLIADVLARFHRHLG 71
>gi|312792522|ref|YP_004025445.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
gi|312179662|gb|ADQ39832.1| methionyl-tRNA synthetase [Caldicellulosiruptor kristjanssonii
177R1B]
Length = 653
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 50/217 (23%), Gaps = 19/217 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHVGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + + H + + + G Y+
Sbjct: 68 --PQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESPW 208
S K + + Y + + P + P
Sbjct: 126 WYCTPCESFWLDRQLIDGKCPDCGRPVERAREESYFFRLSKYQDALMKYIEEHPEFIVPQ 185
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
R + I G P H
Sbjct: 186 SRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKH 222
>gi|301633711|gb|ADK87265.1| methionine--tRNA ligase [Mycoplasma pneumoniae FH]
Length = 512
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 27/152 (17%), Positives = 50/152 (32%), Gaps = 18/152 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I+ DV+ R + E +T D+ KI +A+ +
Sbjct: 17 PHIGHAFTTILADVIKRYKQQNGYEAYF-----LTGTDEHGNKIESKAK------SLGLD 65
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN-NEI 152
+N F + +L H R T+ H Q+ Q + G Y++N
Sbjct: 66 PQTFVDQNVAYFQQMWKQLDI-NFDHFIRTTDLSHKAQVQQAFQLLYDKGLIYQSNWEGA 124
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + + E + ++
Sbjct: 125 YCVECEQNYFTYDKQTMLCEIGHQLTLVQEPS 156
>gi|269120234|ref|YP_003308411.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
gi|268614112|gb|ACZ08480.1| methionyl-tRNA synthetase [Sebaldella termitidis ATCC 33386]
Length = 638
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 25/159 (15%), Positives = 44/159 (27%), Gaps = 17/159 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G A I+ DV R +R E V + T +D+ KI E A + N
Sbjct: 18 PHVGTAYTTIIADVTARYMRLKGYE--VKFS---TGLDEHGQKIQEAAEKN------NVT 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEI 152
+ + F +L H + +I+ + +G Y+
Sbjct: 67 PQEWVDRMAENFKALWKKLNISNTEFIRTTEERHKISVKKMIKRVYENGDIYKGEYKGLY 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ S + K +
Sbjct: 127 CVSDETFVPDNSVLEGNKCPHCGKDLIEVKENSYFFKLS 165
>gi|227538486|ref|ZP_03968535.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
gi|227241672|gb|EEI91687.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33300]
Length = 689
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 28/158 (17%), Positives = 41/158 (25%), Gaps = 26/158 (16%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR +K V YV IT +A++E +
Sbjct: 23 HIGHLAGAYIPGDIFVRYLRL--NQKDVVYVCGSDEHGAAIT-------IKAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
I K QQ + R + H N+ G E
Sbjct: 72 ----PREIIDKYNQQIKESFEEFGIS-FDIYHRTSEPIHHQLSQEFFLNLYHKGEFIERF 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D +K
Sbjct: 127 SEQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKC 164
>gi|145222520|ref|YP_001133198.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|315442968|ref|YP_004075847.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
gi|145215006|gb|ABP44410.1| methionyl-tRNA synthetase [Mycobacterium gilvum PYR-GCK]
gi|315261271|gb|ADT98012.1| methionyl-tRNA synthetase [Mycobacterium sp. Spyr1]
Length = 514
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 61/416 (14%), Positives = 110/416 (26%), Gaps = 69/416 (16%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
H+G+A I D + R R + V ++ TD+ + + +
Sbjct: 16 GDPHVGHAYEYIATDAIARFKRLDGFD--VRFLTG-TDV-----HGLKMAETAARLGVPT 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + N+ F + +L + +H + ++ G Y +
Sbjct: 68 AELARSNSDVFQRLQEKLNVSFDRFIRTSDADHYEASKAIWTRMVDAGDVYLDKYSGWYS 127
Query: 156 TSSIPNYGSFS----------------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ E++ Y + A +
Sbjct: 128 VRDERFFTEAETSIGADGVRIATETGTPVTWTEEETYFFRLSAYTDRLLALYAERPDFIE 187
Query: 200 MEP-------------------GWESPWGRGRPG-----------------WHIECSAMS 223
E WG PG +
Sbjct: 188 PEVRRNEIVSFVSGGLRDLSISRTTFDWGVPVPGHPDHVMYVWVDALTNYLTGVGFPDTD 247
Query: 224 SHYLGKVFD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
S + + +H G D+I H A A IE ++ H N G KMSKS
Sbjct: 248 SETFRRYWPADLHMIGKDIIRFHAVYWPAFLMSA-GIELPKKVFAHGFLFN-RGEKMSKS 305
Query: 282 NGNFITINELLETKKFGG-RSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
GN + N+L+ET R + + ++ + I + E
Sbjct: 306 VGNVVDPNDLVETFGVDQLRYFLLREVSFGQDGSYSEDGIIARINADLANEFGNLAQRSL 365
Query: 341 STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP---IFNASAHILG 393
S +D AV + + A L +++D A +LG
Sbjct: 366 SMVAKNLDGAVPEPGEFTAEDTAMLAAADDLLDRVREHYDATAMHLALEAIWSVLG 421
>gi|189184301|ref|YP_001938086.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
gi|189181072|dbj|BAG40852.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Ikeda]
Length = 854
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 19/58 (32%), Positives = 22/58 (37%), Gaps = 10/58 (17%)
Query: 6 KIY--NTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
KIY N K F +DP PTV HIG+A I D + R R
Sbjct: 25 KIYQWNPAISKKETFI-VDPPP-------PTVSGDLHIGHAMNFIQLDCIVRYQRMIG 74
>gi|42779117|ref|NP_976364.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
gi|42735032|gb|AAS38972.1| methionyl-tRNA synthetase [Bacillus cereus ATCC 10987]
Length = 660
Score = 42.0 bits (97), Expect = 0.19, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|283850590|ref|ZP_06367878.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
gi|283574161|gb|EFC22133.1| methionyl-tRNA synthetase [Desulfovibrio sp. FW1012B]
Length = 650
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 26/187 (13%), Positives = 43/187 (22%), Gaps = 19/187 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A V D L R + + V + +T D DKI E A+
Sbjct: 13 VNAKPHLGHAYTTTVADSLARF--HALLGEDVYF---LTGTDEHGDKIAEAAKAAG---- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN- 149
+ F RL +H + +Q + G Y
Sbjct: 64 --QTPKEYADAISGLFSSLWPRLGITPSRFIRTTDADHKEAVRRALQQVYDKGDIYFGEY 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + K + +
Sbjct: 122 GGHYCKGCERFLTDKELVDGLCPDHKVKPEYIAEKNYFFR---MSKYQGALLDHIRANPD 178
Query: 210 RGRPGWH 216
RP +
Sbjct: 179 FIRPRQY 185
>gi|229494943|ref|ZP_04388694.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
gi|229318167|gb|EEN84037.1| methionyl-tRNA synthetase [Rhodococcus erythropolis SK121]
Length = 532
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 24/157 (15%), Positives = 45/157 (28%), Gaps = 15/157 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R E V + +T D+ K+ + A +E +
Sbjct: 37 GAPHIGHAYEYISSDALARFKRLDGHE--VFF---MTGTDEHGLKMQQTAIKEGIDV--- 88
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N+ F L +H + + + G Y
Sbjct: 89 ---RELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLDTYSG 145
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ Y +D+ + +
Sbjct: 146 WYSVRDEAFYTEAETTLLDDGTRQSTETGTPVEWTEE 182
>gi|145588832|ref|YP_001155429.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
gi|145047238|gb|ABP33865.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
asymbioticus QLW-P1DMWA-1]
Length = 556
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 17/89 (19%), Positives = 29/89 (32%), Gaps = 16/89 (17%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ + D+ R R E V YV DD I+ RA +E +
Sbjct: 21 IHIGHLVEYVQTDIWVRYQRMRGHE--VHYV----GADDTHGTPIMLRAEKEGIT----- 69
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ + ++ +D +
Sbjct: 70 -PKELIANVWKEHKRDFDNFLISFDNYYT 97
>gi|210617035|ref|ZP_03291370.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
gi|210149558|gb|EEA80567.1| hypothetical protein CLONEX_03592 [Clostridium nexile DSM 1787]
Length = 643
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 56/416 (13%), Positives = 99/416 (23%), Gaps = 81/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS------ 89
HIGN ++ D + R R + V + T D+ KI +A + S
Sbjct: 31 PHIGNTYEFVLADAIARYKRSQGYD--VFFQ---TGTDEHGQKIELKAEEAGVSPKEFVD 85
Query: 90 ---------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR---- 124
+D K ++ +
Sbjct: 86 KVAGEVKAIADMMNTSYDKFIRTTDDYHEKQVQKIFKRLYEQGDIYKGHYEGMYCTPCES 145
Query: 125 --------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ + +A I I +
Sbjct: 146 FFTESQLVDGKCPDCGREVQPAQEEAYFFKMSKYADRLIEHINTHPEFIQPVSRKNEMMN 205
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G + + + W G +C S+ K
Sbjct: 206 NFLLPGLQDLCVSRTSFKWGIPVDFDPKHVVYVWLDALTNYITGIGYDCDGESTEQFKKD 265
Query: 231 FD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ +H G D+I H D + +L KMSKS GN I
Sbjct: 266 WPADLHLIGKDIIRFHTIYWPIFLMALD--LPLPKQIFGHPWLLQGDGKMSKSKGNVIYA 323
Query: 289 NELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
+EL+ + VI +++ + T+ L + ++
Sbjct: 324 DELVNMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTLGNLVNRTVSMTNKYF 383
Query: 340 -----TSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
G +D PA + + L AI + L + K D
Sbjct: 384 GGSVTDKGVAGDVDADLKAVVDGTPAAVEEKMDKLRVADAITEIFNLFKRCNKYID 439
>gi|18313703|ref|NP_560370.1| methionyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|25009379|sp|Q8ZU56|SYM_PYRAE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|18161256|gb|AAL64552.1| methionyl-tRNA synthetase alpha subunit [Pyrobaculum aerophilum
str. IM2]
Length = 570
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 26/168 (15%), Positives = 47/168 (27%), Gaps = 13/168 (7%)
Query: 29 YVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
YV G P V H+GN ++ DV R LR E V +V +D+
Sbjct: 4 YVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLKGHE--VVFVSG-SDV-----HGTP 55
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHG 143
E +I + + + K + + + HI + I +G
Sbjct: 56 VEVEAIQLGVDPAEYSMKMHAIVAELFKKWNISFDLYTHTHSETHIKFVQDFYLKIYENG 115
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + +E+ + R +
Sbjct: 116 YIFTKEDEVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLL 163
>gi|229551470|ref|ZP_04440195.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
gi|258540783|ref|YP_003175282.1| methionyl-tRNA synthetase/protein secretion chaperonin, CsaA
[Lactobacillus rhamnosus Lc 705]
gi|229315153|gb|EEN81126.1| methionine--tRNA ligase [Lactobacillus rhamnosus LMS2-1]
gi|257152459|emb|CAR91431.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
[Lactobacillus rhamnosus Lc 705]
Length = 660
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKA------DKLGVTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
Q + L H+ + +++ +I G Y +
Sbjct: 70 QAYVDGMAAQIKQLWKMLEITNDKFIRTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYS 129
Query: 156 TSSIPNYGS 164
+
Sbjct: 130 VEDEEYFTE 138
>gi|229107725|ref|ZP_04237362.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
gi|228675698|gb|EEL30905.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-15]
Length = 660
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|229170889|ref|ZP_04298492.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
gi|228612555|gb|EEK69774.1| Methionyl-tRNA synthetase [Bacillus cereus MM3]
Length = 660
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|157825222|ref|YP_001492942.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
gi|166232832|sp|A8GM09|SYR_RICAH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|157799180|gb|ABV74434.1| arginyl-tRNA synthetase [Rickettsia akari str. Hartford]
Length = 576
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVGY 155
>gi|148553410|ref|YP_001260992.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
gi|148498600|gb|ABQ66854.1| methionyl-tRNA synthetase [Sphingomonas wittichii RW1]
Length = 523
Score = 42.0 bits (97), Expect = 0.20, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R + V + T D+ K+ + AR +
Sbjct: 20 GRPHIGHAYEAIAADAIARFQRSMG--RDVRFQ---TGTDEHGLKMAQAARARDIT---- 70
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ + + F + L + +H + Q + +G Y E
Sbjct: 71 --PRALADEMSSYFKEMCETLNISCDRFIRTSDADHYAASQAIWQAMEANGDLYLDRYEG 128
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 129 WYSVRDEAFYDEKE 142
>gi|323343515|ref|ZP_08083742.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
gi|323095334|gb|EFZ37908.1| methionine--tRNA ligase [Prevotella oralis ATCC 33269]
Length = 687
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 46/167 (27%), Gaps = 18/167 (10%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ + D+ R LR ++ V ++ D+ I+ RAR+E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KQDVIFIGG---SDEHGVPIMIRARKEGIT------ 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNEII 153
+ + K R T H + + +G E E
Sbjct: 72 PQDVVDRYHSLIKKSFEDFGIS-FDIYSRTTSETHHNLASDFFRKLYDNGKLIEKETEQY 130
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+D + ++ +D + P
Sbjct: 131 YDEEAHQFLADRYIVGECPHCHNDHAYGDQCERCGSDLSPMELIDPH 177
>gi|295111687|emb|CBL28437.1| methionyl-tRNA synthetase [Synergistetes bacterium SGP1]
Length = 650
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 42/160 (26%), Gaps = 17/160 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I D + R R V + +T D+ K+ A +
Sbjct: 18 VNDVPHIGHAYTTIACDAMSRYKRMKG--CDVRF---LTGTDEHGQKVQAAAEKRGV--- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
A + + F + L H+ + + + ++ G Y+
Sbjct: 70 ---APQDLVDRIHLNFKELWRVLNVSNDDFIRTTEPRHVRVVQDMFKRLMDQGDIYKGEY 126
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
+ + S K
Sbjct: 127 EGKYCVPCEAYVPESSMGPGGTCPDCGRPLTVMKEESYFF 166
>gi|228937341|ref|ZP_04099988.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|228970227|ref|ZP_04130887.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228976797|ref|ZP_04137210.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228782893|gb|EEM31058.1| Methionyl-tRNA synthetase [Bacillus thuringiensis Bt407]
gi|228789462|gb|EEM37381.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
thuringiensis str. T01001]
gi|228822299|gb|EEM68280.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar berliner
ATCC 10792]
gi|326937830|gb|AEA13726.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar chinensis
CT-43]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|228956480|ref|ZP_04118277.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|229039943|ref|ZP_04189708.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
gi|229142844|ref|ZP_04271287.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|229148448|ref|ZP_04276705.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
gi|296500870|ref|YP_003662570.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
gi|228634990|gb|EEK91562.1| Methionyl-tRNA synthetase [Bacillus cereus m1550]
gi|228640607|gb|EEK96994.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST24]
gi|228727402|gb|EEL78594.1| Methionyl-tRNA synthetase [Bacillus cereus AH676]
gi|228803170|gb|EEM49991.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar pakistani
str. T13001]
gi|296321922|gb|ADH04850.1| methionyl-tRNA synthetase [Bacillus thuringiensis BMB171]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|206977934|ref|ZP_03238821.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|229194429|ref|ZP_04321233.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
gi|206743840|gb|EDZ55260.1| methionyl-tRNA synthetase [Bacillus cereus H3081.97]
gi|228589019|gb|EEK47033.1| Methionyl-tRNA synthetase [Bacillus cereus m1293]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|218235634|ref|YP_002364888.1| methionyl-tRNA synthetase [Bacillus cereus B4264]
gi|218163591|gb|ACK63583.1| methionine--tRNA ligase [Bacillus cereus B4264]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|75759600|ref|ZP_00739686.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Bacillus thuringiensis serovar israelensis ATCC 35646]
gi|74492891|gb|EAO56021.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Bacillus thuringiensis serovar israelensis ATCC 35646]
Length = 669
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 31 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 79
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 80 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 139
Query: 156 TSSIPNYGS 164
Y
Sbjct: 140 VQDETFYTE 148
>gi|324324028|gb|ADY19288.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar finitimus
YBT-020]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|289193278|ref|YP_003459219.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
gi|288939728|gb|ADC70483.1| arginyl-tRNA synthetase [Methanocaldococcus sp. FS406-22]
Length = 566
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L +Y + Y N
Sbjct: 131 HIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162
>gi|296109097|ref|YP_003616046.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
gi|295433911|gb|ADG13082.1| arginyl-tRNA synthetase [Methanocaldococcus infernus ME]
Length = 552
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 13/32 (40%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L +Y E Y N
Sbjct: 125 HIGHLRNAIIGDCLKRILEFYGYEVETHYYVN 156
>gi|228905835|ref|ZP_04069733.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
gi|228853775|gb|EEM98534.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 200]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|228912778|ref|ZP_04076426.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
gi|228846838|gb|EEM91842.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
pulsiensis BGSC 4CC1]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|206972593|ref|ZP_03233536.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
gi|229176639|ref|ZP_04304044.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
gi|229188324|ref|ZP_04315373.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|206732495|gb|EDZ49674.1| methionyl-tRNA synthetase [Bacillus cereus AH1134]
gi|228595123|gb|EEK52893.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 10876]
gi|228606806|gb|EEK64222.1| Methionyl-tRNA synthetase [Bacillus cereus 172560W]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|118475810|ref|YP_892961.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
gi|118415035|gb|ABK83454.1| methionyl-tRNA synthetase [Bacillus thuringiensis str. Al Hakam]
Length = 669
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 31 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 79
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 80 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 139
Query: 156 TSSIPNYGS 164
Y
Sbjct: 140 VQDETFYTE 148
>gi|300119133|ref|ZP_07056834.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
gi|298723455|gb|EFI64196.1| methionyl-tRNA synthetase [Bacillus cereus SJ1]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|164423827|ref|XP_962330.2| hypothetical protein NCU07688 [Neurospora crassa OR74A]
gi|157070248|gb|EAA33094.2| conserved hypothetical protein [Neurospora crassa OR74A]
Length = 1145
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 53/130 (40%), Gaps = 11/130 (8%)
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA-- 372
+ + + + QR+ E E + + + + D T I+ L LA
Sbjct: 610 YLKRQLRSSEQRVAELERQFNTEKDLKSLNKKLIEKRKTVSVLDTQTEIMIRQLEVLAGY 669
Query: 373 ----RESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSA 428
+++ ++ D + ++ I E L N++ AIE+L+ ER L++ K + A
Sbjct: 670 VERAKKTNESFDARELEESA--IKEFVQKLERLKHNMTSAIEQLIAERDDLVEEKNQAIA 727
Query: 429 DYIRKQ-LES 437
D R + L
Sbjct: 728 D--RDRALLE 735
>gi|260593431|ref|ZP_05858889.1| methionine--tRNA ligase [Prevotella veroralis F0319]
gi|260534707|gb|EEX17324.1| methionine--tRNA ligase [Prevotella veroralis F0319]
Length = 687
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 22/188 (11%), Positives = 50/188 (26%), Gaps = 25/188 (13%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KRDVIFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + H + + G E +
Sbjct: 72 ----PQDVCDRYHKLIKDSFEEFGISFDIYSRTTSKTHNKFASDFFRKLYDDGKLVEQES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPWG 209
E +D + +K +D + ++ P
Sbjct: 128 EQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPVI 187
Query: 210 RGRPGWHI 217
+ W++
Sbjct: 188 KKTKNWYL 195
>gi|229067803|ref|ZP_04201121.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
gi|228715287|gb|EEL67145.1| Methionyl-tRNA synthetase [Bacillus cereus F65185]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|229089170|ref|ZP_04220452.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
gi|228694133|gb|EEL47814.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-42]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|196047404|ref|ZP_03114617.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225862090|ref|YP_002747468.1| methionyl-tRNA synthetase [Bacillus cereus 03BB102]
gi|229182433|ref|ZP_04309685.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
gi|196021806|gb|EDX60500.1| methionyl-tRNA synthetase [Bacillus cereus 03BB108]
gi|225788827|gb|ACO29044.1| methionine--tRNA ligase [Bacillus cereus 03BB102]
gi|228601013|gb|EEK58581.1| Methionyl-tRNA synthetase [Bacillus cereus BGSC 6E1]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|217957614|ref|YP_002336156.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
gi|229136885|ref|ZP_04265513.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
gi|217064186|gb|ACJ78436.1| methionyl-tRNA synthetase [Bacillus cereus AH187]
gi|228646550|gb|EEL02756.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST26]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|49477589|ref|YP_034392.1| methionyl-tRNA synthetase [Bacillus thuringiensis serovar konkukian
str. 97-27]
gi|196036355|ref|ZP_03103752.1| methionyl-tRNA synthetase [Bacillus cereus W]
gi|218901239|ref|YP_002449073.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
gi|228925292|ref|ZP_04088389.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|228931541|ref|ZP_04094448.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228943845|ref|ZP_04106231.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|229119701|ref|ZP_04248963.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|301051774|ref|YP_003789985.1| methionine--tRNA ligase [Bacillus anthracis CI]
gi|49329145|gb|AAT59791.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
thuringiensis serovar konkukian str. 97-27]
gi|195990985|gb|EDX54956.1| methionyl-tRNA synthetase [Bacillus cereus W]
gi|218535747|gb|ACK88145.1| methionyl-tRNA synthetase [Bacillus cereus AH820]
gi|228663726|gb|EEL19304.1| Methionyl-tRNA synthetase [Bacillus cereus 95/8201]
gi|228815802|gb|EEM62037.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar monterrey
BGSC 4AJ1]
gi|228828093|gb|EEM73820.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
andalousiensis BGSC 4AW1]
gi|228834339|gb|EEM79879.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
pondicheriensis BGSC 4BA1]
gi|300373943|gb|ADK02847.1| methionine--tRNA ligase [Bacillus cereus biovar anthracis str. CI]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|52145179|ref|YP_081651.1| methionyl-tRNA synthetase [Bacillus cereus E33L]
gi|51978648|gb|AAU20198.1| methionine--tRNA ligase (methionyl-tRNA synthetase) [Bacillus
cereus E33L]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|108805422|ref|YP_645359.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
gi|122975770|sp|Q1AST1|SYM_RUBXD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|108766665|gb|ABG05547.1| methionyl-tRNA synthetase [Rubrobacter xylanophilus DSM 9941]
Length = 577
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 40/153 (26%), Gaps = 16/153 (10%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+ + D+ R LR + V YV TD + I A +E S
Sbjct: 28 HVGHMVGAYLPADIFVRYLRMRGED--VVYVCG-TDEHGV--PITLTAEREGKS------ 76
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + R + +T H + + G+ EA ++ ++
Sbjct: 77 PREVVDYWYAHMKETFARFSISFDNFSRTSTPLHAQNTQLFYRKLKEGGYISEAESKQMY 136
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+
Sbjct: 137 SPTEGRFLPDRYVEGTCPVCGYKEARGDQCDNC 169
>gi|322388105|ref|ZP_08061711.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
gi|321141126|gb|EFX36625.1| methionine--tRNA ligase [Streptococcus infantis ATCC 700779]
Length = 712
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 67 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 121
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K+ + + + ++ +
Sbjct: 122 MAVGVKDLWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 181
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 182 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 238
>gi|288553603|ref|YP_003425538.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
gi|288544763|gb|ADC48646.1| valyl-tRNA synthetase [Bacillus pseudofirmus OF4]
Length = 880
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 38/222 (17%), Positives = 74/222 (33%), Gaps = 9/222 (4%)
Query: 167 RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
+I + P D WK+ + W S + + +
Sbjct: 415 GHRIPAWYHKETGEVYVGHEAPKDPENWKQDEDVLDTWFSSALWPFSTMGWPDTNAADYE 474
Query: 227 LGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
++ G D+IF I Q ++ IH + EGRKMSKS GN +
Sbjct: 475 RFYTTNVLVTGYDIIFFWVSRMIFQGLEFTGKRPFNDVLIHGLVRDSEGRKMSKSLGNGV 534
Query: 287 TINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEILLSKWPQTSTSKG 345
++++ + A +R + + + F +++ +K S
Sbjct: 535 DPMDVID-------KYGADALRFFLSTGSSPGNDLRFYWEKVESTWNFGNKIWNASRFA- 586
Query: 346 IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNA 387
+++ L+ DL+ +I L R D+ + +A
Sbjct: 587 LMNMDGLTYDEIDLSGEKSIADKWILTRLQETTEDVTRLIDA 628
>gi|228898792|ref|ZP_04063075.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
gi|228860817|gb|EEN05194.1| Methionyl-tRNA synthetase [Bacillus thuringiensis IBL 4222]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|296160453|ref|ZP_06843269.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
gi|295889202|gb|EFG69004.1| leucyl-tRNA synthetase [Burkholderia sp. Ch1-1]
Length = 863
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 193
>gi|170695377|ref|ZP_02886523.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170139777|gb|EDT07959.1| leucyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 863
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 47/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 193
>gi|218895174|ref|YP_002443585.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
gi|218546007|gb|ACK98401.1| methionyl-tRNA synthetase [Bacillus cereus G9842]
Length = 660
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|126701164|ref|YP_001090061.1| methionyl-tRNA synthetase [Clostridium difficile 630]
gi|115252601|emb|CAJ70444.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
[Clostridium difficile]
Length = 645
Score = 42.0 bits (97), Expect = 0.21, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 14/172 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI-----P 91
HIG+ + D + R R+ + V + +T D +KI ++A ++ S
Sbjct: 20 HIGHTYSTVAADTIARFKRFCGYD--VKF---LTGTDEHGEKIQKKAIEQGMSEIEYLDG 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + + + + + + +
Sbjct: 75 MIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGEYEGRYCT-PCES 133
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
++ + + + K L+K + P
Sbjct: 134 FWTESQLLEGNKCPDCGRETYLVKEESYFFRLSKYEDRLKELFKDDSFCFPA 185
>gi|196041780|ref|ZP_03109070.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
gi|196027400|gb|EDX66017.1| methionine--tRNA ligase [Bacillus cereus NVH0597-99]
Length = 660
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|163802868|ref|ZP_02196757.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
gi|159173408|gb|EDP58231.1| methionyl-tRNA synthetase [Vibrio sp. AND4]
Length = 686
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 45/412 (10%), Positives = 106/412 (25%), Gaps = 37/412 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIEPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + A + Y + +
Sbjct: 247 KNKFFYVWLDAPVGYMASFKNLCNKTDGLDFDEYWKKDSSAELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L+ L E + +
Sbjct: 306 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAE 414
>gi|154248247|ref|YP_001419205.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
gi|154162332|gb|ABS69548.1| methionyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
Length = 550
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 19/132 (14%), Positives = 41/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+A I D + R R + V ++ TD I K+++ A++ +
Sbjct: 52 PHMGHAYEAIATDCIARFKRLDGYD--VRFLTG-TDEHGI--KMLQTAQKAGVT------ 100
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N +F H + + +G Y++ +
Sbjct: 101 PRELLARNVPRFEAMVEAFNLSIDDFIRTTQERHHASSQAIWAKMAANGDIYKSTYAGWY 160
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 161 SVRDEAYYAEDE 172
>gi|199597844|ref|ZP_03211270.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
gi|258509579|ref|YP_003172330.1| methionyl-tRNA synthetase/ protein secretion chaperonin, CsaA
[Lactobacillus rhamnosus GG]
gi|199591280|gb|EDY99360.1| Methyonyl-tRNA synthetase [Lactobacillus rhamnosus HN001]
gi|257149506|emb|CAR88479.1| methionyl-tRNA synthetase / protein secretion chaperonin, CsaA
[Lactobacillus rhamnosus GG]
gi|259650846|dbj|BAI43008.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus GG]
Length = 660
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 23/128 (17%), Positives = 42/128 (32%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DVL R R + V + +T D+ KI ++A + +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD--VFF---LTGTDEHGLKIEQKADKLGVTPQAYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ +Q K + H+ + +++ +I G Y +
Sbjct: 76 M---AAQIKQLWKMLEITN--DKFIRTTDKEHVEAVQEIVERLIKQGDVYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|194211288|ref|XP_001489211.2| PREDICTED: similar to ATP-binding cassette sub-family A member 12
(ATP-binding cassette transporter 12) (ATP-binding
cassette 12) [Equus caballus]
Length = 2594
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 17/156 (10%), Positives = 32/156 (20%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F
Sbjct: 1703 NFTDRDDKILTRGERLDGVGLLLKKIMAI---FIKRFHHTRRNWKGFIAQVILPIVFVAT 1759
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1760 AMGLGTLRNSSNSYPEMQISPSLYGTSEQTTFYANFHPSTEALVSAMWAFPGIDNMCLNV 1819
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
W++ CS
Sbjct: 1820 SDPRCLKKDSLAKWDTSGEPITNFGVCSCSENIQEC 1855
>gi|327309987|ref|YP_004336884.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326946466|gb|AEA11572.1| leucyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 940
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R ++ D++ R R+ V +
Sbjct: 42 GAIHIGHGRTYLIADIMARYHRHKG--LNVLFPMGF 75
>gi|310642692|ref|YP_003947450.1| methionyl-tRNA synthetase (methionine--tRNA ligase)
[Paenibacillus polymyxa SC2]
gi|309247642|gb|ADO57209.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)
[Paenibacillus polymyxa SC2]
Length = 672
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
D HIG+A + D + R R E V Y +T D+ KI ++A +
Sbjct: 18 DKLHIGHAYTTVAGDAMARYKRLRGYE--VRY---LTGTDEHGQKIEQKASAAGKT 68
>gi|91773875|ref|YP_566567.1| methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
gi|121691622|sp|Q12UQ9|SYM_METBU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|91712890|gb|ABE52817.1| Methionyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
Length = 684
Score = 42.0 bits (97), Expect = 0.22, Method: Composition-based stats.
Identities = 28/170 (16%), Positives = 55/170 (32%), Gaps = 22/170 (12%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERA 83
CG Y AH+G+ R + D+ R L+ E VT+V D I+ A
Sbjct: 13 TCGL-PYANGKAHVGHLRTYVPADIFTRSLKKTGQE--VTFVCG----SDTHGTPIVFNA 65
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIIL 141
+ + + I + F + ++ + TNH + ++ +I
Sbjct: 66 EE------LKTTPTEIIKVYHKHFDEIFKKMGVMLDAFGTTDDPTNH-NRTTEIVSKLIE 118
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G+ Y EI + S + + ++ +
Sbjct: 119 NGYVYPKTIEIAYCPSCDRSLPDRYVKGTCPHCKKEARGDECDQGCGKHL 168
>gi|255657488|ref|ZP_05402897.1| methionyl-tRNA synthetase [Clostridium difficile QCD-23m63]
gi|296449084|ref|ZP_06890874.1| methionine--tRNA ligase [Clostridium difficile NAP08]
gi|296879907|ref|ZP_06903880.1| methionine--tRNA ligase [Clostridium difficile NAP07]
gi|296262177|gb|EFH08982.1| methionine--tRNA ligase [Clostridium difficile NAP08]
gi|296429196|gb|EFH15070.1| methionine--tRNA ligase [Clostridium difficile NAP07]
Length = 645
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 14/172 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI-----P 91
HIG+ + D + R R+ + V + +T D +KI ++A ++ S
Sbjct: 20 HIGHTYSTVAADTIARFKRFCGYD--VKF---LTGTDEHGEKIQKKAIEQGMSEIEYLDG 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + + + + + + +
Sbjct: 75 MIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGEYEGRYCT-PCES 133
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
++ + + + K L+K + P
Sbjct: 134 FWTESQLLEGNKCPDCGRETYLVKEESYFFRLSKYEDRLKELFKDDSFCFPA 185
>gi|255102750|ref|ZP_05331727.1| methionyl-tRNA synthetase [Clostridium difficile QCD-63q42]
gi|255308571|ref|ZP_05352742.1| methionyl-tRNA synthetase [Clostridium difficile ATCC 43255]
Length = 645
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 14/172 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI-----P 91
HIG+ + D + R R+ + V + +T D +KI ++A ++ S
Sbjct: 20 HIGHTYSTVAADTIARFKRFCGYD--VKF---LTGTDEHGEKIQKKAIEQGMSEIEYLDG 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + + + + + + +
Sbjct: 75 MIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGEYEGRYCT-PCES 133
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
++ + + + K L+K + P
Sbjct: 134 FWTESQLLEGNKCPDCGRETYLVKEESYFFRLSKYEDRLKELFKDDSFCFPA 185
>gi|254977164|ref|ZP_05273636.1| methionyl-tRNA synthetase [Clostridium difficile QCD-66c26]
gi|255094494|ref|ZP_05323972.1| methionyl-tRNA synthetase [Clostridium difficile CIP 107932]
gi|255316245|ref|ZP_05357828.1| methionyl-tRNA synthetase [Clostridium difficile QCD-76w55]
gi|255518906|ref|ZP_05386582.1| methionyl-tRNA synthetase [Clostridium difficile QCD-97b34]
gi|255652085|ref|ZP_05398987.1| methionyl-tRNA synthetase [Clostridium difficile QCD-37x79]
gi|260685058|ref|YP_003216343.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
gi|260688716|ref|YP_003219850.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
gi|260211221|emb|CBA66728.1| methionyl-tRNA synthetase [Clostridium difficile CD196]
gi|260214733|emb|CBE07412.1| methionyl-tRNA synthetase [Clostridium difficile R20291]
Length = 645
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 18/172 (10%), Positives = 47/172 (27%), Gaps = 14/172 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSI-----P 91
HIG+ + D + R R+ + V + +T D +KI ++A ++ S
Sbjct: 20 HIGHTYSTVAADTIARFKRFCGYD--VKF---LTGTDEHGEKIQKKAIEQGMSEIEYLDG 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I + + + + + + + + +
Sbjct: 75 MIKDIKALWNTMDISYDDFIRTTEKRHTDIIQKIFTKLYEQGDIYKGEYEGRYCT-PCES 133
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
++ + + + K L+K + P
Sbjct: 134 FWTESQLLEGNKCPDCGRETYLVKEESYFFRLSKYEDRLKELFKDDSFCFPA 185
>gi|219117325|ref|XP_002179457.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409348|gb|EEC49280.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 643
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 37/191 (19%), Positives = 59/191 (30%), Gaps = 17/191 (8%)
Query: 29 YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQ 85
Y GP AH+G+A DV+ R R V +V T D+ KI + A
Sbjct: 117 YTNGP-----AHMGHAYEAATSDVIVRYQRLLG-THPVYFV---TGADEHGQKIAQTAAD 167
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
I I T V + L + + H L Q G
Sbjct: 168 AGK-----VPIDICDQYVTGFQVLNQRILIANDDYVRTTSARHKQLAQTLWQRCADAGDI 222
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
Y ++ +++D + + +P K ++ F + K + E
Sbjct: 223 YLDTYSGWYNVREETFVTDMEAQQLDYKDPTSGLPLKQVEEESYFFKMSKYHAQLVAHIE 282
Query: 206 SPWGRGRPGWH 216
S +P H
Sbjct: 283 SNPEFIQPDAH 293
>gi|157737467|ref|YP_001490150.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
gi|157699321|gb|ABV67481.1| methionyl-tRNA synthetase [Arcobacter butzleri RM4018]
Length = 650
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 50/183 (27%), Gaps = 16/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D AHIG+A I+ D+L R R + +T D+ KI + A
Sbjct: 17 VNDVAHIGHAYTTIIADMLARYSRLTGSNTFL-----LTGTDEHGQKIAQSAEIR----- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
N + + +F + H + + + G Y+
Sbjct: 67 -NKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDIYKGEY 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + R K+ F L K + +E
Sbjct: 126 EGFYCVPCETFFPESQLVDEQFCPDCGRATT-LVKEESYFFELSKYEEKLLKWYEENEDC 184
Query: 211 GRP 213
P
Sbjct: 185 ILP 187
>gi|330835309|ref|YP_004410037.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329567448|gb|AEB95553.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 939
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
HIG+ R + D++ R R K V +
Sbjct: 48 HIGHGRTYVTADIVARYQRMIG--KNVLF 74
>gi|312877507|ref|ZP_07737468.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
gi|311795710|gb|EFR12078.1| methionyl-tRNA synthetase [Caldicellulosiruptor lactoaceticus 6A]
Length = 653
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 25/217 (11%), Positives = 50/217 (23%), Gaps = 19/217 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHVGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + + H + + + G Y+
Sbjct: 68 --PQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESPW 208
S K + + Y + + P + P
Sbjct: 126 WYCTPCESFWLDRQLIDGKCPDCGRPVERAREESYFFRLSKYQDALMKYIEEHPEFIVPQ 185
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
R + I G P H
Sbjct: 186 SRANEMINNFIKPGLEDICVSRTTIKWGIEVPFDPKH 222
>gi|302870971|ref|YP_003839607.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
gi|302573830|gb|ADL41621.1| methionyl-tRNA synthetase [Caldicellulosiruptor obsidiansis OB47]
Length = 653
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 17/154 (11%), Positives = 38/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G+ + D + R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHVGHTYCTVAADTIARYKRLRGYD--VFF---LTGTDEHGQKIERKAQEAGKT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + + H + + + G Y+
Sbjct: 68 --PQQYVDEIVASIKELWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 126 WYCTPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|256810399|ref|YP_003127768.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
gi|256793599|gb|ACV24268.1| arginyl-tRNA synthetase [Methanocaldococcus fervens AG86]
Length = 566
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L +Y + Y N
Sbjct: 131 HIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162
>gi|228983294|ref|ZP_04143508.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
gi|229153817|ref|ZP_04281948.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228629621|gb|EEK86317.1| Methionyl-tRNA synthetase [Bacillus cereus ATCC 4342]
gi|228776408|gb|EEM24760.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
tochigiensis BGSC 4Y1]
Length = 660
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|33861424|ref|NP_892985.1| methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
gi|33634001|emb|CAE19326.1| Methionyl-tRNA synthetase [Prochlorococcus marinus subsp. pastoris
str. CCMP1986]
Length = 511
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 34/214 (15%), Positives = 67/214 (31%), Gaps = 14/214 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ ++ D + R R + V + IT +D+ KI A+ +
Sbjct: 12 VNDKPHLGSIYTTLICDSIARYKRLTGAD--VIF---ITGVDEHGLKIQRTAKNKGVEPQ 66
Query: 92 IN-DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL---HGHAYE 147
+ D IS I +N + + + + + +I + G
Sbjct: 67 FHCDEISDIFKQNWKNWDITHNKFVRTSSQKHEYIVKEFYNRVKKSDDIYMGVQKGWYCV 126
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
E + + P + +K E K + K K L K ++P
Sbjct: 127 GCEEFKDNPDNSPTHKCPIHQKTLEWKNEENLFFKLSKYQSQIEELIKEPAFIQPKERRN 186
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI 241
++ ++S + I +D
Sbjct: 187 EIINFVSKGLKDFSISR--TNVSWGISVPDIDNH 218
>gi|33865789|ref|NP_897348.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
gi|48428528|sp|Q7U6T1|SYL_SYNPX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|33632959|emb|CAE07770.1| leucyl-tRNA synthetase [Synechococcus sp. WH 8102]
Length = 857
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 49 HMGHVRNYVITDVIARVQRMRG--HSVLHPMG---WD------AFGLPAENAAIERNVDP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 98 GDWTDRNIDQMRSQLDRLGLSIDWDREQATCHSDYYR 134
>gi|331000453|ref|ZP_08324128.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
gi|329571785|gb|EGG53465.1| leucine--tRNA ligase [Parasutterella excrementihominis YIT 11859]
Length = 877
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
+ YVC Y H+G+ R + DVLYR LR
Sbjct: 40 KFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRG 76
>gi|308069627|ref|YP_003871232.1| methionyl-tRNA synthetase (methionine--tRNA ligase)
[Paenibacillus polymyxa E681]
gi|305858906|gb|ADM70694.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase)
[Paenibacillus polymyxa E681]
Length = 672
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 16/56 (28%), Positives = 24/56 (42%), Gaps = 8/56 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
D HIG+A + D + R R E V Y +T D+ KI ++A +
Sbjct: 18 DKLHIGHAYTTVAGDAMARYKRLRGYE--VRY---LTGTDEHGQKIEQKASAAGKT 68
>gi|315637191|ref|ZP_07892413.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
gi|315478558|gb|EFU69269.1| methionine--tRNA ligase [Arcobacter butzleri JV22]
Length = 650
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 30/183 (16%), Positives = 50/183 (27%), Gaps = 16/183 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D AHIG+A I+ D+L R R + +T D+ KI + A
Sbjct: 17 VNDVAHIGHAYTTIIADMLARYSRLTGSNTFL-----LTGTDEHGQKIAQSAEIR----- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
N + + +F + H + + + G Y+
Sbjct: 67 -NKTPKEYADEISGKFRTLWDDFDITYDKFIRTTDEEHKIGVQKAFEIMYKKGDIYKGEY 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E + + R K+ F L K + +E
Sbjct: 126 EGFYCVPCETFFPESQLVDEQFCPDCGRATT-LVKEESYFFELSKYEEKLLKWYEENEDC 184
Query: 211 GRP 213
P
Sbjct: 185 ILP 187
>gi|253581458|ref|ZP_04858683.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
gi|251836528|gb|EES65063.1| methionine-tRNA ligase [Fusobacterium varium ATCC 27725]
Length = 641
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 38/280 (13%), Positives = 79/280 (28%), Gaps = 28/280 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + V + +T D+ K+ E ARQ+ +
Sbjct: 14 VNGDPHVGSAYTTIAADVIARYKKTMGYD--VFF---LTGTDEHGQKVEETARQKGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T +FV+ L H + +++ + +G Y+
Sbjct: 67 ----PQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYDNGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ S +++ E Y K P +
Sbjct: 123 SGKYCVSCETFVPENQIVNGNHCPDCGKELRVVREESYFFKMSKYQDALLAHIDSHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + +
Sbjct: 183 LPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENN 242
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
E W + ++L G+ + + + L K
Sbjct: 243 PELFDKFWTNGEVMHLLGKDIVRFHAIIWPCMLLSAGVKL 282
>gi|15668412|ref|NP_247208.1| arginyl-tRNA synthetase [Methanocaldococcus jannaschii DSM 2661]
gi|2501049|sp|Q57689|SYR_METJA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|1590971|gb|AAB98223.1| arginyl-tRNA synthetase (argS) [Methanocaldococcus jannaschii DSM
2661]
Length = 566
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L +Y + Y N
Sbjct: 131 HIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162
>gi|302381491|ref|YP_003817314.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
gi|302192119|gb|ADK99690.1| leucyl-tRNA synthetase [Brevundimonas subvibrioides ATCC 15264]
Length = 865
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 18 FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
F D + YV P H+G+AR ++ DV+ R R +
Sbjct: 27 FVTRDTGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARHKRAQGYD 74
>gi|295672620|ref|XP_002796856.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
gi|226282228|gb|EEH37794.1| methionyl-tRNA synthetase [Paracoccidioides brasiliensis Pb01]
Length = 576
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 29/168 (17%), Positives = 48/168 (28%), Gaps = 26/168 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI------DD---KIIERARQ 85
V HIG+ MI+ DVL R TD D+ KI + A
Sbjct: 63 VNAAPHIGHLYTMILGDVLKRWQILLGN----------TDAKLLTGTDEHGLKIQQAAA- 111
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGH 144
A + +N Q F + H + + + G+
Sbjct: 112 -----VAGMAPQELCDQNCQTFKNLARTVNVENDHFIRTTDPQHKDAVRHFWDMLNHRGY 166
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y A +E + S Y + + I + G ++ +
Sbjct: 167 IYTAKHEGWYSVSDEAFYPPSAVQPILDPSTGRKIIASIETGKEVQWT 214
>gi|222478882|ref|YP_002565119.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
gi|222451784|gb|ACM56049.1| methionyl-tRNA synthetase [Halorubrum lacusprofundi ATCC 49239]
Length = 714
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 14/47 (29%), Positives = 19/47 (40%), Gaps = 6/47 (12%)
Query: 17 EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
+F DP+ + CG Y HIG+ R + DV R L
Sbjct: 5 DFPTDDPAVV---TCGL-PYANGDLHIGHLRTYVGGDVYRRALERLG 47
>gi|330834208|ref|YP_004408936.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566347|gb|AEB94452.1| leucyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 952
Score = 42.0 bits (97), Expect = 0.23, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
H+G+ R + DV R +R V +
Sbjct: 55 HLGHGRTYVTGDVYARYMRMKGY--NVLFPMGF 85
>gi|269796313|ref|YP_003315768.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
gi|269098498|gb|ACZ22934.1| methionyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
Length = 546
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 42/137 (30%), Gaps = 18/137 (13%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + DVL R + ++ V + +T D+ K++ A +
Sbjct: 24 VNDAPHIGHAYTTVAGDVLTRW--HRQRQERVWF---LTGTDEHGQKVMRTAEANGVT-- 76
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHG--HAYE 147
+ + + R T H ++ IQ++ G +A
Sbjct: 77 ----PQEWADRLVESSWEPVLETLDARNDDFIRTTQPRHTERVQRFIQDLHDKGEIYAGS 132
Query: 148 ANNEIIFDTSSIPNYGS 164
G
Sbjct: 133 YEGPYCVGCEEYKLPGE 149
>gi|225352579|ref|ZP_03743602.1| hypothetical protein BIFPSEUDO_04203 [Bifidobacterium
pseudocatenulatum DSM 20438]
gi|225156773|gb|EEG70167.1| hypothetical protein BIFPSEUDO_04203 [Bifidobacterium
pseudocatenulatum DSM 20438]
Length = 928
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 43/282 (15%), Positives = 77/282 (27%), Gaps = 50/282 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 58 PTVSGHLHVGHVFSYTHTDVIARFKRMNGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 115
Query: 73 T----DID--------D--KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
T D D D KI + + + +T+++ +QF L
Sbjct: 116 TSLKYDPDFVPPFEGTDGKKIDAKDQVPISRKNFIELCEKLTAQDEKQFEALWRSLGLSI 175
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
Q T + H + + + + T
Sbjct: 176 DWTQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQKDAPGLWDVTFQTA 221
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V + + K + E G RP C A+ +H + + + G
Sbjct: 222 VAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACGALIAHPDDERYKPYFGQY 281
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
H + A ++K A I + F ++ + +
Sbjct: 282 VYSPLFHVKVPILAHKAAEMDKGAGIAMCCTFGDVTDVEWWR 323
>gi|320161686|ref|YP_004174911.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
gi|319995540|dbj|BAJ64311.1| isoleucyl-tRNA synthetase [Anaerolinea thermophila UNI-1]
Length = 1051
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 40/307 (13%), Positives = 76/307 (24%), Gaps = 21/307 (6%)
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
I TS+ + V+ R+ + + +
Sbjct: 409 TWYIRTSQYRNRLVELNERINWYPSHIKNGRFGNWLENNIDWALGRERYWGTPLPVWECE 468
Query: 155 DTSSIPNY------GSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ R + + ++ K P R + W
Sbjct: 469 SCHHEHMVGSVKELSEMAGRDLSGLDLHRPHVDEVVLKCPECGGRMTRVPELIDVWFDSG 528
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHN 268
WH D +D + A S E N+
Sbjct: 529 SMPVAQWHYPFENQDIFKKQFPADFICEAVDQTRGWFYSLHAISTLLFDSECYKNVICLG 588
Query: 269 GFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM-----THYREPIDFT 323
L+ G+KMSKS GN + +++ R A +R + R +
Sbjct: 589 LILDKNGQKMSKSRGNIVDPWDVI-------RQHGADAMRWYLYTATPPGQERRFSAELV 641
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYN---DLNTVSAIQALHKLARESTKNHD 380
+ ++ + L + +D + + ALH L R+ T +
Sbjct: 642 GEVVSNFTLTLWNTYSFFVTYANLDGWKPEPGAQVQYNSLDRWLLSALHALVRDVTNALE 701
Query: 381 LLPIFNA 387
+ A
Sbjct: 702 TYDVLGA 708
>gi|303257887|ref|ZP_07343896.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
gi|302859230|gb|EFL82312.1| leucine--tRNA ligase [Burkholderiales bacterium 1_1_47]
Length = 877
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
+ YVC Y H+G+ R + DVLYR LR
Sbjct: 40 KFYVCPMLPYPSGKLHMGHVRNYTLNDVLYRYLRMRG 76
>gi|302186396|ref|ZP_07263069.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae 642]
Length = 499
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 20/170 (11%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R E V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ +N+ + + N + + + + A
Sbjct: 65 VD------PVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALGDAGAI 118
Query: 147 EANNEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
E + + Y +F+R + + + + D L
Sbjct: 119 ECRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAALM 168
>gi|291455990|ref|ZP_06595380.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
gi|291382399|gb|EFE89917.1| valyl-tRNA synthetase [Bifidobacterium breve DSM 20213]
Length = 911
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCEKLTAEDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPRRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 EVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|119872747|ref|YP_930754.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
gi|166231635|sp|A1RTX9|SYL_PYRIL RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|119674155|gb|ABL88411.1| leucyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
Length = 945
Score = 41.6 bits (96), Expect = 0.24, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R ++ DVL R R+ + V Y
Sbjct: 47 GAVHIGHGRTYLIADVLARFYRHMG--RVVLYPMGF 80
>gi|254796861|ref|YP_003081698.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
gi|254590097|gb|ACT69459.1| leucyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
Length = 854
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 27/146 (18%), Positives = 46/146 (31%), Gaps = 17/146 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DVL R R V + I A E +I N
Sbjct: 66 HMGHLRNYVIGDVLARYKRSQGY--NVLH---------PIGWDAFGLPAEKAAISSNIHP 114
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
I T KN + + ++ +T + + G AY+ N+E+
Sbjct: 115 RIWTEKNIAKMRTSLKSIGLSYDWNRELSTCSPEYYKHEQKFFLAFLKAGLAYKKNSEVN 174
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRV 179
+D + + G V
Sbjct: 175 WDPIDNTVLANEQVIDGRGWRSGAVV 200
>gi|91790434|ref|YP_551386.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
gi|123355109|sp|Q122Q4|SYL_POLSJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|91699659|gb|ABE46488.1| leucyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 886
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 53/200 (26%), Gaps = 24/200 (12%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
Y C Y H+G+ R + D+L R LR V D A
Sbjct: 40 YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMKGY--NVLMPMG---WD------AFGL 88
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ + T N K + + AT + +L ++
Sbjct: 89 PAENAAMKNGVPPAQWTYDNIAYMKKQMQAMGLAIDWSREVATCDPSYYKWNQWLFLKML 148
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWK 195
G AY + +D + + G V ++ L
Sbjct: 149 EKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVEKREIPGYYLKITDYAEELLG 208
Query: 196 RSTPMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 209 HVQHQLPGWPERVRLMQENW 228
>gi|261403793|ref|YP_003248017.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
gi|261370786|gb|ACX73535.1| arginyl-tRNA synthetase [Methanocaldococcus vulcanius M7]
Length = 566
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L +Y + Y N
Sbjct: 131 HIGHLRNAIIGDCLKRILEFYGYDVETHYYVN 162
>gi|323449969|gb|EGB05853.1| hypothetical protein AURANDRAFT_66081 [Aureococcus anophagefferens]
Length = 720
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 11/42 (26%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Query: 395 EVCKEHLNKNIS-IAIEKLVQERLILLKMKKFSSADYIRKQL 435
E + + A E LV ER +++ AD +R +L
Sbjct: 359 EPGAPAFESDDALQAAEALVAERAKCRSDREYRRADELRDEL 400
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 5/20 (25%), Positives = 10/20 (50%)
Query: 416 RLILLKMKKFSSADYIRKQL 435
R+ + + AD +R +L
Sbjct: 298 RVKARSDRDYGRADDLRDEL 317
>gi|295398235|ref|ZP_06808281.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
gi|294973585|gb|EFG49366.1| methionine--tRNA ligase [Aerococcus viridans ATCC 11563]
Length = 672
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 40/129 (31%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI ++A ++ S
Sbjct: 22 HIGNTYTTVASDTLARYKRANDFD-----VMFLTGADEHGQKIQQKAEEQGIS------P 70
Query: 97 SIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + + + HI + Y+ ++ G Y E +
Sbjct: 71 QEYVDGMAAGMQELWKTMKISNDIFMRTSSQQHIEAIQYIFDRLLEQGDIYLGEYEGWYS 130
Query: 156 TSSIPNYGS 164
S +
Sbjct: 131 VSDEEFFTE 139
>gi|300770034|ref|ZP_07079913.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
gi|300762510|gb|EFK59327.1| methionine--tRNA ligase [Sphingobacterium spiritivorum ATCC 33861]
Length = 689
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 28/157 (17%), Positives = 41/157 (26%), Gaps = 24/157 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR +K V YV IT +A++E +
Sbjct: 23 HIGHLAGAYIPGDIFVRYLRL--NQKDVVYVCGSDEHGAAIT-------IKAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
I K QQ + H+ H N+ G E +
Sbjct: 72 ----PREIIDKYNQQIKESFEEFGISFDIYHRTSEPVHHQLSQEFFLNLYNKGEFIERFS 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D +K
Sbjct: 128 EQYYDEEFHQFLADRYIVGTCPNCHSEGAYGDQCEKC 164
>gi|48428670|sp|Q970Z6|SYL2_SULTO RecName: Full=Leucyl-tRNA synthetase 2; AltName: Full=Leucine--tRNA
ligase 2; Short=LeuRS 2
Length = 944
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 15/114 (13%), Positives = 28/114 (24%), Gaps = 12/114 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKIIERARQEHPSIPINDA 95
H+G+ R + D+ R +R V + T II A + + +
Sbjct: 43 HLGHGRTYVTCDIYARYMRMKGY--NVLFPMGFHYTGT----PIIAMA--DDVAKGDKEL 94
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
I I + + L + R +
Sbjct: 95 IDIFKNIYEIPDNVISKLADPLFMANYFRDEIKKAMKEIGLSIDWRREFTTIDP 148
>gi|226307854|ref|YP_002767814.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
gi|226186971|dbj|BAH35075.1| methionyl-tRNA synthetase [Rhodococcus erythropolis PR4]
Length = 532
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 45/157 (28%), Gaps = 15/157 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R E V + +T D+ K+ + A +E +
Sbjct: 37 GAPHIGHAYEYISSDALARFKRLDGHE--VFF---MTGTDEHGLKMQQTAIKEGIDV--- 88
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N+ F L +H + + + G Y
Sbjct: 89 ---RELAARNSDVFQNLDKVLNISYDRFIRTTDADHQVASKAIWEKMAASGDIYLDTYSG 145
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ Y +++ + +
Sbjct: 146 WYSVRDEAFYTESETTLLEDGTRQSTETGTPVEWTEE 182
>gi|23464992|ref|NP_695595.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
gi|23325592|gb|AAN24231.1| valyl-tRNA synthetase [Bifidobacterium longum NCC2705]
Length = 946
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 92 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 149
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 150 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 208
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 209 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 254
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 255 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 314
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 315 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 357
>gi|73663575|ref|YP_302356.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
gi|82582280|sp|Q49UZ9|SYM_STAS1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|72496090|dbj|BAE19411.1| methionyl-tRNA synthetase [Staphylococcus saprophyticus subsp.
saprophyticus ATCC 15305]
Length = 658
Score = 41.6 bits (96), Expect = 0.25, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A DV+ R R + V Y +T D+ KI E+A++ S
Sbjct: 20 HIGHAYTTTAGDVIARYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKSEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y E +
Sbjct: 70 -EYLDEMIAGIKDLWGKLEISNDDFIRTTEIRHKEVVQQIFERLLAQGDIYLGEYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETYYTE 137
>gi|322375421|ref|ZP_08049934.1| methionine--tRNA ligase [Streptococcus sp. C300]
gi|321279684|gb|EFX56724.1| methionine--tRNA ligase [Streptococcus sp. C300]
Length = 665
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
++ K Q + + ++ +
Sbjct: 75 MVVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 135 FTESQLAEVFRDEAGNVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 191
>gi|310794257|gb|EFQ29718.1| tRNA synthetase class I [Glomerella graminicola M1.001]
Length = 545
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 31/168 (18%), Positives = 55/168 (32%), Gaps = 17/168 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ MI+ DVL R + T D+ K+ + A ++
Sbjct: 20 VNASPHIGHMYSMILADVLKRWQVLKGRPAILC-----TGTDEHGSKVQQAAARQGVEPK 74
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
T + +D R + H R T +H + + + G+ YEA
Sbjct: 75 DFCD-------TTAEKFRDLARAIGMDNDHFIRTTDPDHKEAVQHFWHLLKGKGYIYEAK 127
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
++ + S Y + + + G N ++I K
Sbjct: 128 HQGWYCISDECFYAADEIERKVVPRTGRTAMVSIESGNEVEWIEEKTY 175
>gi|78067237|ref|YP_370006.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
gi|123728935|sp|Q39DV4|SYM_BURS3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|77967982|gb|ABB09362.1| methionyl-tRNA synthetase [Burkholderia sp. 383]
Length = 720
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + + +D ++ + I + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYVALQDAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPY 187
>gi|32266841|ref|NP_860873.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
gi|32262893|gb|AAP77939.1| methionyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
Length = 643
Score = 41.6 bits (96), Expect = 0.26, Method: Composition-based stats.
Identities = 49/352 (13%), Positives = 92/352 (26%), Gaps = 67/352 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----ID------------- 76
V D HIG+A I+ D+L + + + V ++ TD I+
Sbjct: 14 VNDIPHIGHAYTTILCDMLKKFYQLQGND--VKFLTG-TDEHGQKIEQSAQKHSLDPQSY 70
Query: 77 -DKIIERARQEHPSIPINDAISIITSKNTQQF-------VKDTTRLACLAPTHQPRATNH 128
DKI R ++ N I + +
Sbjct: 71 ADKISIRFKE--LWNEFNIDYDIFVRTTDNMHCLSVQKAFEIMYAKGDIYKGSYEGHYCI 128
Query: 129 IPQMIYLIQNIILHGHAYEA-NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ + + + + + I S S + K+ + +
Sbjct: 129 SCETFFTQKQLNENNACPDCGKPTQIVQEESYFFALSKYQNKLLDWYKSHPDFILPQFRQ 188
Query: 188 PADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF---------------- 231
+ + G P H ++ V+
Sbjct: 189 NEIIKFVNEGLNDLSITRTSFEWGVPLPHNPVRKDDKKHVMYVWLDALLSYLSPLGYLSD 248
Query: 232 ---------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
IH G D++ H +A +G+ +G KMSKS
Sbjct: 249 SAKMPYWENAIHFVGKDILRFHAVYWLAFLMSL--ELPLPQHIYAHGWWTKDGTKMSKSI 306
Query: 283 GNFITINELLETKKFGGRSWPAPVIRLAMLM-THYREPIDFTVQRLTEAEIL 333
GN I E+ ++ +R +L + + DF+ + E
Sbjct: 307 GNVINPKEV-------ANAYGIESLRYFLLREMPFGQDGDFSQKAFIERINA 351
>gi|319407165|emb|CBI80804.1| Arginyl-tRNA synthetase [Bartonella sp. 1-1C]
Length = 588
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 58/374 (15%), Positives = 105/374 (28%), Gaps = 46/374 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KIIERARQEH 87
PT H+G+ R ++ DVL LL++ E Y N D KI+ R+
Sbjct: 136 PT--GPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYIN-----DAGEQIKILARSVMLR 188
Query: 88 PSIPINDAISIITS-----KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
+ IS I + + + + + I ++
Sbjct: 189 YRQALGQIISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSIIQEHAIDAMMAT 248
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
A I D + + + Y K K EP
Sbjct: 249 IRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGTLPPPKGKNIEDWEP 308
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
++ + G + + + S F F H +E+ AD
Sbjct: 309 REQTLFRSTDVGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYILGADHTGYVK 368
Query: 263 NIWIHNGFLNLEG-------------------RKMSKSNGNFITINELLETKKFGGRSWP 303
+ ++ +MSK G+F+T+ +++E
Sbjct: 369 RLEAVAKAISGNKVKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEEVGR------ 422
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLN 360
+R ML P+DF ++TE + + A L + +
Sbjct: 423 -DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFLTENPS 481
Query: 361 TVSAIQALHKLARE 374
+ I L +L E
Sbjct: 482 NSTMIAHLDQLVDE 495
>gi|306820842|ref|ZP_07454465.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
gi|304551114|gb|EFM39082.1| methionine--tRNA ligase [Eubacterium yurii subsp. margaretiae ATCC
43715]
Length = 655
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 23/180 (12%), Positives = 49/180 (27%), Gaps = 21/180 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPINDAI 96
HIG+ + D + R R+ + V + +T D +KI ++A + +
Sbjct: 32 HIGHTYTTVAVDAISRYKRFTGYD--VRF---LTGTDEHGEKIQKKAEE------LGKKP 80
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EANNEII 153
++ H + + + + G Y E +
Sbjct: 81 KEYLDGMIDDIKALWAKMEISYDDFIRTTDKRHTEAVQKIFKTLYDKGDIYLDEYEGKYC 140
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
S K + + ++ F L K ++ +E P
Sbjct: 141 VPCESFWTESQLVDGKCPDCHREVQTRKESS----YFFRLSKYQDRLKKYYEDNPDFCFP 196
>gi|153835356|ref|ZP_01988023.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
gi|148868127|gb|EDL67289.1| methionyl-tRNA synthetase [Vibrio harveyi HY01]
Length = 686
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N E L+ ++ + + Y + +
Sbjct: 247 KNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L+ L E + +
Sbjct: 306 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422
Query: 428 --ADYI 431
AD I
Sbjct: 423 AAADRI 428
>gi|109894991|sp|Q5FH87|SYR_EHRRG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
Length = 576
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL E
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLERVGYE 162
>gi|58617231|ref|YP_196430.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
gi|58416843|emb|CAI27956.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Gardel]
Length = 601
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL E
Sbjct: 159 PT--GPMHIGHARGAIFGDVLANLLERVGYE 187
>gi|227545731|ref|ZP_03975780.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|312133397|ref|YP_004000736.1| vals [Bifidobacterium longum subsp. longum BBMN68]
gi|317482768|ref|ZP_07941780.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
12_1_47BFAA]
gi|322688413|ref|YP_004208147.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
gi|322690432|ref|YP_004220002.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|90103528|sp|Q8G777|SYV_BIFLO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|227213847|gb|EEI81686.1| valine--tRNA ligase [Bifidobacterium longum subsp. infantis ATCC
55813]
gi|291517529|emb|CBK71145.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. longum F8]
gi|311772623|gb|ADQ02111.1| ValS [Bifidobacterium longum subsp. longum BBMN68]
gi|316915803|gb|EFV37213.1| anticodon-binding domain-containing protein [Bifidobacterium sp.
12_1_47BFAA]
gi|320455288|dbj|BAJ65910.1| valyl-tRNA synthase [Bifidobacterium longum subsp. longum JCM 1217]
gi|320459749|dbj|BAJ70369.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis 157F]
Length = 911
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|19704603|ref|NP_604165.1| methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|25009363|sp|Q8RE57|SYM_FUSNN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|19714899|gb|AAL95464.1| Methionyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 636
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 35/262 (13%), Positives = 71/262 (27%), Gaps = 30/262 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + +V T +D+ K+ + A+Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMDTH--FV---TGLDEHGQKVEQAAKQNGFT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGW 204
+ + + K L K P +
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKDLTVLKEESYFFKMSKYADALLKHI-DEHPDF 181
Query: 205 ESPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---D 256
P R ++ ++S + I + + + A +
Sbjct: 182 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAGFEN 241
Query: 257 RIEKTANIWIHNGFLNLEGRKM 278
K W ++ ++L G+ +
Sbjct: 242 DENKFDKFWNNSRVVHLIGKDI 263
>gi|15612616|ref|NP_240919.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
gi|25009402|sp|Q9KGK8|SYM_BACHD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|10172665|dbj|BAB03772.1| methionyl-tRNA synthetase [Bacillus halodurans C-125]
Length = 660
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 21/132 (15%), Positives = 39/132 (29%), Gaps = 15/132 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R V +T D+ KI ++A + +
Sbjct: 19 DKLHIGHAYTTVAGDAMARYKRLRGYN-----VMYLTGTDEHGQKIEQKAEAKGLT---- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ +L HI + + + ++ G Y + E
Sbjct: 70 --PKQFVDEIVSGIQDLWKKLDISYDDFIRTTEERHIKVVQQIFEQLLDQGDIYLGDYEG 127
Query: 153 IFDTSSIPNYGS 164
+ Y
Sbjct: 128 WYSIPDETFYTE 139
>gi|260584776|ref|ZP_05852521.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
gi|260157433|gb|EEW92504.1| methionine--tRNA ligase [Granulicatella elegans ATCC 700633]
Length = 670
Score = 41.6 bits (96), Expect = 0.27, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R + + +T D+ KI ++A++ S
Sbjct: 22 HIGHAYTTVASDAMIRYKKLQGYDTYF-----LTGTDEHGQKIQQKAQEAGVSEI----- 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+L H + + Q ++ +G Y E +
Sbjct: 72 -EFVDNIIFGIQDLWKKLDVSYDDFIRTTQPRHKKSVQKIFQKLMDNGDIYLGEYEGWYS 130
Query: 156 TSSIPNYGS 164
S +
Sbjct: 131 VSDEEYFTE 139
>gi|296453432|ref|YP_003660575.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
[Bifidobacterium longum subsp. longum JDM301]
gi|296182863|gb|ADG99744.1| tRNA synthetase, valyl/leucyl, anticodon-binding protein
[Bifidobacterium longum subsp. longum JDM301]
Length = 911
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|91202480|emb|CAJ72119.1| strongly similar to methionyl-tRNA synthetase [Candidatus Kuenenia
stuttgartiensis]
Length = 520
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 47/181 (25%), Gaps = 19/181 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG++ I DVL R R + V + +T D+ KI + A
Sbjct: 15 VNDIPHIGHSYTTIAADVLARYRRLQQYD--VFF---LTGSDEHGQKIQKAAEA------ 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
N + +F L H+ ++ + Q + +G Y
Sbjct: 64 CNKTPNDFVDMVVGKFKDLWENLNISNDDFIRTTDERHVKRVKKIFQKLFENGDIYLGEY 123
Query: 151 E-IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR---STPMEPGWES 206
E + + K K P +
Sbjct: 124 EGRYCVPCESFWTETQLDEGRCPECRRNVEKVKEKNYFFRLSKYQKPLIEHYDKHPEFIQ 183
Query: 207 P 207
P
Sbjct: 184 P 184
>gi|57239219|ref|YP_180355.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|58579177|ref|YP_197389.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|81352891|sp|Q5HB39|SYR_EHRRW RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|57161298|emb|CAH58219.1| arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
gi|58417803|emb|CAI27007.1| Arginyl-tRNA synthetase [Ehrlichia ruminantium str. Welgevonden]
Length = 576
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL E
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLERVGYE 162
>gi|294782393|ref|ZP_06747719.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294481034|gb|EFG28809.1| methionine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 637
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + +V T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMDTH--FV---TGLDEHGQKVEQAAEQNGFT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + +++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W ++L G+ +
Sbjct: 243 DKKFDKFWNDARVVHLIGKDI 263
>gi|284929295|ref|YP_003421817.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
gi|284809739|gb|ADB95436.1| methionyl-tRNA synthetase [cyanobacterium UCYN-A]
Length = 536
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 57/181 (31%), Gaps = 15/181 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G+A ++ DV+ R + E V + IT D+ KI A N
Sbjct: 22 DLPHVGSAYTTMIADVISRYKKLKGEE--VLF---ITGTDEHGQKIERNAEAN------N 70
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ F +L T H + Q + +G Y + +
Sbjct: 71 LPAQEHCDRIVSSFKLLWDKLDIQYDRFSRTTDTQHQKIVYEFFQRVWDNGDIYLSRQQG 130
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + + + +++ + F L K + +E +++ +
Sbjct: 131 WYCVACEEFKEERELLENGCCPVHFNKKAEWYDEENYFFKLSKYQSQLEELYKNNPEFIK 190
Query: 213 P 213
P
Sbjct: 191 P 191
>gi|158335466|ref|YP_001516638.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|158305707|gb|ABW27324.1| methionyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 532
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 52/168 (30%), Gaps = 14/168 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A + D + R R E + IT D+ KI A Q +
Sbjct: 18 VNDLPHIGSAYTTMAADAIARFHRLQGHEVLL-----ITGTDEHGQKIQRTAEQRGKAPQ 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
D I + + + + + T PR H + Q + G + + +
Sbjct: 73 --DHCDEIVAGYKDLWQRLNIQYDRFSRTTSPR---HGQIVAEFFQRVWDKGDICQGHQQ 127
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ + D + P ++ + F L K
Sbjct: 128 GWY-CVGCEEFKEERDLLEDNHCPIHKRPVEWRDEQNYFFRLSKYQDD 174
>gi|146421716|ref|XP_001486802.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
6260]
gi|146387923|gb|EDK36081.1| hypothetical protein PGUG_00179 [Meyerozyma guilliermondii ATCC
6260]
Length = 590
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 12/59 (20%), Positives = 24/59 (40%), Gaps = 4/59 (6%)
Query: 12 ERKITEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
+ ++++ + Y C Y H+G+ R + DV+ R +R K V +
Sbjct: 75 SGSLNPAKSMNADGEKFYCCSMFPYPSGALHMGHLRVYTISDVVARYMRLKG--KNVIH 131
>gi|257066998|ref|YP_003153254.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
gi|256798878|gb|ACV29533.1| methionyl-tRNA synthetase [Anaerococcus prevotii DSM 20548]
Length = 648
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 27/175 (15%), Positives = 49/175 (28%), Gaps = 17/175 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN ++ DVL R + +T T D+ KI+ A S I
Sbjct: 21 HIGNTYTSVIADVLKRYKNLKGFDAYLT-----TGTDEHGQKIMRTALDAGTSPQKFVDI 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I + + + K + H + + + G Y+ + + T
Sbjct: 76 --IAEETKELWKKLEIDY---DTFIRSTEDQHEKDVAEIFTKLYEKGDIYKGEYKGYYCT 130
Query: 157 SSIPN----YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+++ + E Y + K P + P
Sbjct: 131 PCETFWTESQLEDGHCPDCGREVEYQEEETYFFRLSKYTDRLKELFKEHPEFLEP 185
>gi|58258053|ref|XP_566439.1| methionine-tRNA ligase [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222576|gb|AAW40620.1| methionine-tRNA ligase, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 582
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 20/188 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ +++ DVL R R + ++ V + T D+ KI + A+
Sbjct: 62 VNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFA---TGTDEHGLKIQQAAKANGVGE- 117
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE-AN 149
+Q+F K H+ + ++ G Y+ +
Sbjct: 118 -----QEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK----RSTPMEPGWE 205
+ + S + ++ KM WK R + W
Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEE--TNWKFRLGRHKKVLEKWL 230
Query: 206 SPWGRGRP 213
S P
Sbjct: 231 SQPESVHP 238
>gi|261749393|ref|YP_003257078.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
gi|261497485|gb|ACX83935.1| methionyl-tRNA synthetase [Blattabacterium sp. (Periplaneta
americana) str. BPLAN]
Length = 561
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR +K V ++ IT +A++E
Sbjct: 19 GPIHIGHLAGVYLPADIFVRYLRRK--KKEVIFICGSDEHGVPIT-------IQAKKE-- 67
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
N I +K + H + + +E
Sbjct: 68 ----NTTPKEIVNKYHFMIKDCFENFGIHFDNYSRTSTVIHQKISTSFFKKLHKEKKIFE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D + I +
Sbjct: 124 KVSEQYYDNQAKQFLADRYIYGICPHCKHKEAYGDQCESC 163
>gi|225620506|ref|YP_002721763.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
gi|225215325|gb|ACN84059.1| methionyl-tRNA synthetase [Brachyspira hyodysenteriae WA1]
Length = 651
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 55/164 (33%), Gaps = 17/164 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPIN 93
D+ HIG+ I D + R + + V + +T D +KI +A +
Sbjct: 17 DYLHIGHCYCTIATDTMARYKKIMGYD--VYF---LTGTDEHGEKIARKAEAAGTT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNE 151
+ RL +H R T H ++ + + + G+ Y+ + +
Sbjct: 68 --PKAYVDNIVNATKELWKRLHI-DYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGSYK 124
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
++ S + K D+ K EK + + K
Sbjct: 125 GLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLK 168
>gi|134105975|ref|XP_777998.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260701|gb|EAL23351.1| hypothetical protein CNBA0050 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 582
Score = 41.6 bits (96), Expect = 0.28, Method: Composition-based stats.
Identities = 29/188 (15%), Positives = 55/188 (29%), Gaps = 20/188 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ +++ DVL R R + ++ V + T D+ KI + A+
Sbjct: 62 VNASPHVGHLHSLLLTDVLARFSRLRHPQRKVVFA---TGTDEHGLKIQQAAKANGVGE- 117
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE-AN 149
+Q+F K H+ + ++ G Y+ +
Sbjct: 118 -----QEFCDDVSQRFRKLAKLANASNTDFIRTTELRHVKAVEQFWNTLVASGDIYKGTH 172
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK----RSTPMEPGWE 205
+ + S + ++ KM WK R + W
Sbjct: 173 SGWYSISDESFYAVSQVTKSPEDGKMIAIETGNEVIWEEE--TNWKFRLGRHKKVLEKWL 230
Query: 206 SPWGRGRP 213
S P
Sbjct: 231 SQPESVHP 238
>gi|317054912|ref|YP_004103379.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
gi|315447181|gb|ADU20745.1| methionyl-tRNA synthetase [Ruminococcus albus 7]
Length = 651
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 57/416 (13%), Positives = 109/416 (26%), Gaps = 82/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN ++ D + R R + V + +T D+ KI A++E S +
Sbjct: 19 PHIGNTYEVVFTDAIARFKRMQGYD--VFF---LTGTDEHGMKIEGLAKEEGISPKEHVD 73
Query: 96 -----ISIITS----------KNTQQFVK--DTTRLACLAPTHQPRATNHIPQMIYLIQN 138
I I + T + + L ++ ++
Sbjct: 74 KVAGEIKDICKCMNISYDGFIRTTDEQHEKVVQKIFNKLYEQGDIYKGSYEGMYCVPCES 133
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA--------- 189
+ P + K+ + + + H
Sbjct: 134 FWTQSQLVDGK-CPDCGREVKPAHEEAYFLKLSKYQQWLEDYIETHPDFIVPESRKKEML 192
Query: 190 --------------------DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK 229
+ + W + S +
Sbjct: 193 NNFIKPGLQDLCVSRTTFTWSIPVTFDPKHVIYVWIDALSNYITALGYDPDGSSEQFKKY 252
Query: 230 -VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D H G D++ H + + ++ KMSKS GN I
Sbjct: 253 WPCDCHVIGKDIMRFHSIYWPIMLHALG--VEIPKKLFGHNWILFGEDKMSKSKGNVIYA 310
Query: 289 NELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
+E+++T G + I L+ Y + T+ L + ++K
Sbjct: 311 DEVVDTFGVDGARYYLLSEMGLNGDGSITYESLIERYNSDLANTLGNLVNRTVAMTKKYF 370
Query: 340 -----TSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
K +D P ++ L + A++A+ LAR + K D
Sbjct: 371 GGEIRQPEVKEPVDDELIALAVETPKKVADLIDQYRMADAMEAIMTLARRANKYID 426
>gi|239622594|ref|ZP_04665625.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
gi|239514591|gb|EEQ54458.1| valyl-tRNA synthetase [Bifidobacterium longum subsp. infantis CCUG
52486]
Length = 911
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|213691193|ref|YP_002321779.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
longum subsp. infantis ATCC 15697]
gi|254783552|sp|B7GTW0|SYV_BIFLI RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|213522654|gb|ACJ51401.1| tRNA synthetase, valyl/leucyl, anticodon-binding [Bifidobacterium
longum subsp. infantis ATCC 15697]
gi|320457252|dbj|BAJ67873.1| valyl-tRNA synthase [Bifidobacterium longum subsp. infantis ATCC
15697]
Length = 911
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|17540794|ref|NP_502196.1| Methionyl tRNA Synthetase family member (mrs-1) [Caenorhabditis
elegans]
gi|3915072|sp|Q20970|SYMC_CAEEL RecName: Full=Methionyl-tRNA synthetase, cytoplasmic; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|3877884|emb|CAA97803.1| C. elegans protein F58B3.5a, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 917
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 21/238 (8%), Positives = 54/238 (22%), Gaps = 22/238 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R + YV TD + E
Sbjct: 44 PYVNNVPHLGNIIGCVLSADVFARYCNLRGHQT--FYVGG-TD----------EYGTATE 90
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
++ + K T+H ++ + + +G+
Sbjct: 91 TKALQEGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYT 150
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGW 204
+ + ++ + +
Sbjct: 151 SSQSVDQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCK 210
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+P + + + + D D + + I ++ ++
Sbjct: 211 ATPEVKQSTHIFLSLDKLQQK-TTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRC 267
>gi|23335631|ref|ZP_00120865.1| COG0525: Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|189440059|ref|YP_001955140.1| valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
gi|254783551|sp|B3DU23|SYV_BIFLD RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|189428494|gb|ACD98642.1| Valyl-tRNA synthetase [Bifidobacterium longum DJO10A]
Length = 911
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 37/283 (13%), Positives = 75/283 (26%), Gaps = 52/283 (18%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 57 PTVSGSLHVGHVFSYTHTDVIARYKRMRGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 114
Query: 73 ---------------TDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL 117
TD KI + + + +T+++ + F +L
Sbjct: 115 VSLPYDPDFKPPFEGTD-GKKIDAKDQVPISRKNFIELCERLTAQDEKLFEALWRKLGLS 173
Query: 118 APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGT 177
Q T + H + + + + T
Sbjct: 174 IDWSQTYHT--------------IGQHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQT 219
Query: 178 RVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG 237
V + + K + E G RP C+++ ++ + + + G
Sbjct: 220 AVAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQ 279
Query: 238 LDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 280 YVYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 322
>gi|225869045|ref|YP_002744993.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
gi|225702321|emb|CAX00124.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
Length = 667
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R + V Y +T +D+ KI ++A++ S
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGYD--VFY---LTGLDEHGQKIQDKAQEAGLSPQAYVDG 75
Query: 96 -ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----------HIPQMIYLIQNIILHG 143
+ + + + H+ ++
Sbjct: 76 MAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + G E + K +K
Sbjct: 136 FTESQLAEVYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDF 192
>gi|327311388|ref|YP_004338285.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326947867|gb|AEA12973.1| arginyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 629
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+ R ++ D L RLLR+ E V + +DD
Sbjct: 124 HVGHGRNAVLGDALVRLLRFCGSEVEVHF-----YVDD 156
>gi|206560985|ref|YP_002231750.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|226710898|sp|B4E8E0|SYM_BURCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|198037027|emb|CAR52948.1| methionyl-tRNA synthetase [Burkholderia cenocepacia J2315]
Length = 718
Score = 41.6 bits (96), Expect = 0.29, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD I+ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRALRMHGHE--VYYI----GADDTHGTPIMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D ++ ++ + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEKIYLALQEAGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPY 187
>gi|28807062|dbj|BAC60332.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
Length = 676
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 48/433 (11%), Positives = 108/433 (24%), Gaps = 48/433 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 12 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 64
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 65 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 119
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 120 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 179
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 180 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 239
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + + Y + +
Sbjct: 240 KDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW- 298
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 299 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 355
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 356 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 415
Query: 428 --ADYIRKQLESK 438
AD I +L
Sbjct: 416 AAADRI-AELFEA 427
>gi|328474598|gb|EGF45403.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 10329]
Length = 688
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 48/433 (11%), Positives = 108/433 (24%), Gaps = 48/433 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 77 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 251
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + + Y + +
Sbjct: 252 KDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW- 310
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 311 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427
Query: 428 --ADYIRKQLESK 438
AD I +L
Sbjct: 428 AAADRI-AELFEA 439
>gi|251771721|gb|EES52296.1| methionyl-tRNA synthetase [Leptospirillum ferrodiazotrophum]
Length = 673
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY 61
V D HIG+A + DVL R R
Sbjct: 17 VNDIPHIGHAYTTVAADVLARTHRLLG 43
>gi|18311505|ref|NP_563439.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|18146189|dbj|BAB82229.1| probable methionine-tRNA ligase [Clostridium perfringens str. 13]
Length = 514
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|319758341|gb|ADV70283.1| methionyl-tRNA synthetase [Streptococcus suis JS14]
Length = 667
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 58/181 (32%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R E V Y +T +D+ KI E+A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIEEKAKEAGLTPQAYVDG 74
Query: 97 SII-TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
+ + + + + + + +I L ++ Y ++E
Sbjct: 75 MAVGVQELWNLLDISYDKFIRTTDDYHEEVVAAVFEKLLAQDDIYLGEYSGWYSVSDEEF 134
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + + + L K + + + +P
Sbjct: 135 FTESQLEEVFRDENGKVTGGIAPSGHEVAWVSEESYFLRLSKYQDKLVEFFNAHPDFIQP 194
Query: 214 G 214
Sbjct: 195 D 195
>gi|311895205|dbj|BAJ27613.1| putative methionyl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 515
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 18/118 (15%), Positives = 36/118 (30%), Gaps = 17/118 (14%)
Query: 32 GPTVYDFAHIGNAR-PMIVFDVLYRLLRYYY----GEKCVTYVRNITDIDDKIIERARQE 86
GPT H+G+ P + DV R R V + +N I+ AR+
Sbjct: 10 GPTANGDLHLGHLAGPFLSADVCARYARATGRDTLFGTGVHFTQNY------IVTTARR- 62
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + + + +Q + ++ + + + GH
Sbjct: 63 -----LGERPEELRLRAAEQVEATLAAAGIVPDGFVRFDERYLKTVRTFFERLHGEGH 115
>gi|307720328|ref|YP_003891468.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
gi|306978421|gb|ADN08456.1| arginyl-tRNA synthetase [Sulfurimonas autotrophica DSM 16294]
Length = 531
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D LYR+ ++ + Y N
Sbjct: 114 PT--GPLHIGHARGAVYGDTLYRMAKHLGYDITAEYYVN 150
>gi|296242227|ref|YP_003649714.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296094811|gb|ADG90762.1| methionyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 503
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 22/185 (11%), Positives = 46/185 (24%), Gaps = 16/185 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A + DVL R R EK V + +T D+ KI + + +
Sbjct: 15 GPPHIGHAYTTVYADVLARFARLI--EKDVFF---LTGNDEHGLKI------QRFAEKLG 63
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN-NE 151
+ + + RL + H ++ + + G+ Y+
Sbjct: 64 KTPKEVVDEMAVIYRDYWLRLNISYDYFIRTTDSVHEKVVMSSFEKLYRKGYVYKDKYGG 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + + +
Sbjct: 124 LYCVDCEKYYLPGEYVEVEGKPYCPIHNKPLEYLEEETYYFKLSEFKDYLLEVLRNNKIV 183
Query: 212 RPGWH 216
P +
Sbjct: 184 YPEEY 188
>gi|228963136|ref|ZP_04124306.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
gi|228796521|gb|EEM43959.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar sotto
str. T04001]
Length = 563
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|161511054|ref|NP_798448.2| methionyl-tRNA synthetase [Vibrio parahaemolyticus RIMD 2210633]
gi|260879483|ref|ZP_05891838.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|260898218|ref|ZP_05906714.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|260903217|ref|ZP_05911612.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
gi|61252102|sp|Q87N07|SYM_VIBPA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|308088382|gb|EFO38077.1| methionine--tRNA ligase [Vibrio parahaemolyticus Peru-466]
gi|308093540|gb|EFO43235.1| methionine--tRNA ligase [Vibrio parahaemolyticus AN-5034]
gi|308106544|gb|EFO44084.1| methionine--tRNA ligase [Vibrio parahaemolyticus AQ4037]
Length = 688
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 48/433 (11%), Positives = 108/433 (24%), Gaps = 48/433 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 77 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 131
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 251
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + + Y + +
Sbjct: 252 KDKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW- 310
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 311 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAK 367
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFV 427
Query: 428 --ADYIRKQLESK 438
AD I +L
Sbjct: 428 AAADRI-AELFEA 439
>gi|299133888|ref|ZP_07027082.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
gi|298591724|gb|EFI51925.1| methionyl-tRNA synthetase [Afipia sp. 1NLS2]
Length = 523
Score = 41.6 bits (96), Expect = 0.30, Method: Composition-based stats.
Identities = 26/134 (19%), Positives = 45/134 (33%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D L R R K V + +T D+ K+I+ A++E N
Sbjct: 23 GAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGLKMIQTAQKE------N 71
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++N +F + RL + H + + + G Y +
Sbjct: 72 MTPHELATRNAGRFKEMDQRLNISFDRFIRTSEPAHHASTQEIWRRMAASGDIYLDSYAG 131
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 132 WYSVRDEAYYAEDE 145
>gi|302339380|ref|YP_003804586.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
gi|301636565|gb|ADK81992.1| methionyl-tRNA synthetase [Spirochaeta smaragdinae DSM 11293]
Length = 736
Score = 41.6 bits (96), Expect = 0.31, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 44/165 (26%), Gaps = 19/165 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEH 87
P V + H+GN ++ DV R R E YV TD RA +E
Sbjct: 12 PYVNNIPHLGNLIQVLSADVFSRFCRLKGYETL--YVCG-TDEYGTA----TETRALEEG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAY 146
S + + + + + +T ++ I + + G+
Sbjct: 65 VS------PKELCDRYYKIHSEIYSWFNIAFDHFGRTSTQWQTDIVQDIFKKVDAAGYIT 118
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
E E ++ S R +
Sbjct: 119 EQTIEQLYCESCDRFLADRFVRGTCPHCGYEDARGDQCENCGKLL 163
>gi|307595328|ref|YP_003901645.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307550529|gb|ADN50594.1| arginyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 643
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R ++ D L RLLR+ V + N
Sbjct: 130 PMHIGHGRNAVLGDSLARLLRFCGASVKVHFYVN 163
>gi|184200670|ref|YP_001854877.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
gi|183580900|dbj|BAG29371.1| methionyl-tRNA synthetase [Kocuria rhizophila DC2201]
Length = 517
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 40/160 (25%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I D L R R + TD + + + +
Sbjct: 18 GAPHIGHAYEAIAADTLVRFQRLDG--VATRFQTG-TD-----EHGQKMQQTAEKLGTTP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ N+ +F + L +H L + + +G Y +
Sbjct: 70 RELADANSARFREMDDELGISYDRFIRTTDEDHAAASQELWKRMEANGDIYLDTYAGWYS 129
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + + + + ++
Sbjct: 130 VRDEAYYAEDETEVRADGQRYSIGTGTELTWTEEESYFFR 169
>gi|168205783|ref|ZP_02631788.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170662677|gb|EDT15360.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 514
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFNIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|110799452|ref|YP_697210.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|168209761|ref|ZP_02635386.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|110674099|gb|ABG83086.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|170712061|gb|EDT24243.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
Length = 514
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 27/131 (20%), Positives = 48/131 (36%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ Y+I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEEQVKYIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|317485261|ref|ZP_07944142.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
gi|316923552|gb|EFV44757.1| arginyl-tRNA synthetase [Bilophila wadsworthia 3_1_6]
Length = 551
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+ R V D L R+LR+ + Y N
Sbjct: 127 PT--GPLHIGHGRGAAVGDTLARILRFAGYDVTTEYYIN 163
>gi|168217640|ref|ZP_02643265.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|182380323|gb|EDT77802.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 514
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|145346883|ref|XP_001417911.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578139|gb|ABO96204.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 591
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 32/179 (17%), Positives = 54/179 (30%), Gaps = 17/179 (9%)
Query: 32 GPT--------VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA 83
GPT V D HIG+ V D R R + V ++ TD
Sbjct: 64 GPTFVTTPIYYVNDQPHIGHVYTSTVADAYARYRRARGED--VFFLTG-TD-----EHGL 115
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILH 142
+ E + + +N+Q+F T H Q+ L++ +
Sbjct: 116 KVEQSAEKRGIEPQALADENSQKFRDVMTAYDISFDEFIRTTDDYHERQVRALVKVLQEK 175
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
Y E +D Y +++D + + + F L K +E
Sbjct: 176 DAVYLGRFEGWYDEGQEEYYTESKAKELDYKSPISGKDMVRSSEENYYFRLSKFQKELE 234
>gi|146303356|ref|YP_001190672.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|189082974|sp|A4YE96|SYL1_METS5 RecName: Full=Leucyl-tRNA synthetase 1; AltName:
Full=Leucine--tRNA ligase 1; Short=LeuRS 1
gi|145701606|gb|ABP94748.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 938
Score = 41.2 bits (95), Expect = 0.31, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
HIG+ R I D++ R R K V +
Sbjct: 47 HIGHGRTYITADIVARYQRMIG--KNVLF 73
>gi|54294866|ref|YP_127281.1| methionyl-tRNA synthetase [Legionella pneumophila str. Lens]
gi|53754698|emb|CAH16185.1| hypothetical protein lpl1945 [Legionella pneumophila str. Lens]
Length = 519
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 19/170 (11%), Positives = 38/170 (22%), Gaps = 13/170 (7%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNI--TDIDDKIIERARQEHPS 89
PT H+G+ P + D+L R LR V I TD + +
Sbjct: 14 PTPNGRLHLGHIGGPFLSADILARYLRTRGHSAWV-----ISGTDS-----FESYAAGKA 63
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
+ + + +D + + + I +
Sbjct: 64 EEEHRSPEETCNYYHPLIEEDLRLMGIQMDLFINPLKAPWKYLYQHWHHNIYNQLINNGT 123
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+I + + +K + R
Sbjct: 124 TLVIKEKFPWDEDSQRYLSGYWLKGDCPICRKKTASYFCENCGTHFRPEE 173
>gi|329910003|ref|ZP_08275186.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
gi|327546321|gb|EGF31342.1| Leucyl-tRNA synthetase [Oxalobacteraceae bacterium IMCC9480]
Length = 883
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 28/199 (14%), Positives = 54/199 (27%), Gaps = 18/199 (9%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+YR LR V D
Sbjct: 40 KFYACSMLPYPSGKLHMGHVRNYTINDVMYRHLRMNGY--NVLMPMG---WD---AFGMP 91
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ N + T N + + + + ++ ++
Sbjct: 92 AENAAMANNVPPAQWTYANIAHMKQQMQAMGLAIDWSREMTACKPDYYKWNQWMFLKMLE 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKR 196
G Y+ + +D + + G + ++ A L
Sbjct: 152 KGIVYKKTGTVNWDPIDQTVLANEQVVDGRGWRSGALIEKREIPMYYARITDYAEELLDH 211
Query: 197 STPMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 212 VDNKLPGWPERVRTMQANW 230
>gi|312898858|ref|ZP_07758246.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
gi|310620020|gb|EFQ03592.1| leucyl-tRNA synthetase [Megasphaera micronuciformis F0359]
Length = 827
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 33/217 (15%), Positives = 59/217 (27%), Gaps = 25/217 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+ R R V + A E+ +I N
Sbjct: 48 HMGHVRNYTIGDVIARYRRMNGY--NVLHPMGF---------DAFGMPAENAAIKRNIPP 96
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNEI- 152
+ T N + L + AT H ++ + + G AY ++
Sbjct: 97 AEWTYDNIANMERQQKSLGLSYDWDREVATCHKDYYRWTQWIFELLYKRGLAYRKEAKVN 156
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF---ILWKRSTPMEPGWESPWG 209
DT + + V + + + PGW
Sbjct: 157 WCDTCNTVLANEQVIDGKCWRCDHDVVKKDLKQWFFKITDYADQLLDDLKLLPGWPERVK 216
Query: 210 RGRPGW----HIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ W +G+ D+ +D IF
Sbjct: 217 TMQKNWIGRSEGAQFCFDIPEIGEKLDMFSTRVDTIF 253
>gi|146295253|ref|YP_001179024.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
gi|145408829|gb|ABP65833.1| methionyl-tRNA synthetase [Caldicellulosiruptor saccharolyticus DSM
8903]
Length = 655
Score = 41.2 bits (95), Expect = 0.32, Method: Composition-based stats.
Identities = 19/154 (12%), Positives = 37/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D L R R + V + +T D+ KI +A++ +
Sbjct: 17 DKLHIGHTYCTVAADTLARYKRLQGYD--VFF---LTGTDEHGQKIERKAQE------VG 65
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANN 150
+ + H + + + G Y+
Sbjct: 66 KTPQKYVDEIVASIKDLWKLMNISYDDFIRTTEERHKKVVQKIFTKLYEQGDIYKSEYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
S K + +
Sbjct: 126 WYCTPCESFWLDRQLVDGKCPDCGRPVERAREES 159
>gi|296086256|emb|CBI31697.3| unnamed protein product [Vitis vinifera]
Length = 611
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 32/210 (15%), Positives = 56/210 (26%), Gaps = 18/210 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A S
Sbjct: 79 VNAPPHMGSAYTTIAADAIARFQRLSG--KKVIF---ITGTDEHGEKIATAAAACGSSPS 133
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ +I+ + +D + H + ++ +G Y
Sbjct: 134 --EHCDVISQAY-KTLWQDLDI--AYDKFIRTTNPKHEAIVKEFYSRVLANGDIYRADYE 188
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + V K F L K +E
Sbjct: 189 GLYCINCEEYKDEKELLENNCCPMHLKPCVLRKEDNYF---FALSKYQKLLEETLTQNPD 245
Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLD 239
+P + + + F I +D
Sbjct: 246 FVQPSFRLNEVQSWIKSGLRDFSISRASVD 275
>gi|257468429|ref|ZP_05632523.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|317062695|ref|ZP_07927180.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313688371|gb|EFS25206.1| methionyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
Length = 641
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 37/280 (13%), Positives = 79/280 (28%), Gaps = 28/280 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + V + +T D+ K+ E A+Q+ +
Sbjct: 14 VNGDPHVGSAYTTIAADVIARYKKTMGYD--VFF---LTGTDEHGQKVEETAKQKGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T +FV+ L H + +++ + +G Y+
Sbjct: 67 ----PQEWTDIMAPKFVEMWKALNIEYTDFIRTTEPRHKEAVKKILKKVYENGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ S +++ E Y K P +
Sbjct: 123 SGKYCVSCETFVPENQIVNGNHCPDCGKELRVVKEESYFFKMSKYQDALLAHIDSHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + +
Sbjct: 183 LPRSRKNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENN 242
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKF 297
E W + ++L G+ + + + L K
Sbjct: 243 PELFDKFWTNGEVVHLLGKDIVRFHAIIWPCMLLSAGVKL 282
>gi|224372504|ref|YP_002606876.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
gi|254782978|sp|B9L8B8|SYR_NAUPA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|223588954|gb|ACM92690.1| arginyl-tRNA synthetase [Nautilia profundicola AmH]
Length = 532
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 49/362 (13%), Positives = 101/362 (27%), Gaps = 39/362 (10%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT--YV----RNITDIDDKIIER---- 82
PT HIG+AR + D + R+ R+ + VT YV R IT +
Sbjct: 113 PT--GPLHIGHARGAVFGDAIARIGRHIGYD-VVTEYYVNDAGRQIT------LLGLSVY 163
Query: 83 -ARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI-YLIQNII 140
A +E + + + + + + + +
Sbjct: 164 LAAREILGLDVKWPEEYYRGEYIKDLAAEAIKEFGEDYFKAEIDAENFNDDKLNMWAKDK 223
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+ E + + DE + ++K+ ++
Sbjct: 224 MLNLIKEDIKALNVTPFDNWVSEKELYKHWDEVRAILEKNGALYEKDGKVWLKSSEYKDE 283
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
+ GRP + + +D + H IA+ A
Sbjct: 284 KDRVVV-REDGRPTYLAGDIIYHWDKFKRNYDRYINIW---GADHHGYIARVKAAIKFLG 339
Query: 258 IEKTANIWIHNGFLNLEG----RKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ + + + L KMSK GNFI +++++ + A +R L
Sbjct: 340 FDPEKLEILLSQMVKLLKGGEPYKMSKRAGNFILVSDVV-------KDVGADALRFVFLT 392
Query: 314 THYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
++F V L + + I + + ++ L K +
Sbjct: 393 KKADTHLEFDVDELNRQDSSNPAYYINYAHARIKSIFRNKEMNLEDTVNIQLKDLSKDEK 452
Query: 374 ES 375
+
Sbjct: 453 DL 454
>gi|169343242|ref|ZP_02864253.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|169298540|gb|EDS80621.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
Length = 514
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|70727520|ref|YP_254436.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
gi|82582279|sp|Q4L3E7|SYM_STAHJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|68448246|dbj|BAE05830.1| methionyl-tRNA synthetase [Staphylococcus haemolyticus JCSC1435]
Length = 659
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 8/54 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSI 90
HIG+A + DV+ R R + V Y +T D+ KI E+A++ +
Sbjct: 20 HIGHAYSTVAGDVISRYKRMQGYD--VRY---LTGTDEHGQKIQEKAQKAGKTE 68
>gi|330790515|ref|XP_003283342.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
gi|325086767|gb|EGC40152.1| methionyl-tRNA synthetase [Dictyostelium purpureum]
Length = 720
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 38/153 (24%), Gaps = 11/153 (7%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V + H+GN + DV R R V Y+ TD E ++
Sbjct: 25 PYVNNVPHLGNLVGSTLSADVYARYCRLK--NYNVIYIWG-TD-----EYGTATETKALQ 76
Query: 92 INDAISIITSKNTQQFVKDTTRLA--CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
I K + + + ++ + I+ +
Sbjct: 77 EKCTPKEICDKYHKIHKEIYEWFNISFDKFDIFKKLNDNGYTLTQEIEQLYCEQTCKMFL 136
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ + +R ++ P
Sbjct: 137 ADRYVEGICPHCQYEDARGDQCDKCTKLLNPTD 169
>gi|170691989|ref|ZP_02883153.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
gi|170143273|gb|EDT11437.1| methionyl-tRNA synthetase [Burkholderia graminis C4D1M]
Length = 715
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 26/167 (15%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPVMLRAEKEGIT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ---------NIILHGHA 145
+ + Q+ +D + + + I + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEETRVLSENIYLALKEAGLIDARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPY 186
>gi|164688857|ref|ZP_02212885.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
16795]
gi|164602061|gb|EDQ95526.1| hypothetical protein CLOBAR_02505 [Clostridium bartlettii DSM
16795]
Length = 648
Score = 41.2 bits (95), Expect = 0.33, Method: Composition-based stats.
Identities = 21/176 (11%), Positives = 44/176 (25%), Gaps = 24/176 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPINDAI 96
HIG+ + D + R R+ + V + +T D +KI ++A++ +
Sbjct: 20 HIGHTYTTVATDAIARFKRFCGYD--VRF---LTGTDEHGEKIQKKAKEAGMTE------ 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE-------- 147
K + H + + + G Y+
Sbjct: 69 MEYLDGMIADIKKLWKTMDISYDDFIRTTEPRHTKIIQKIFTKLYEQGDIYKGEYEGRYC 128
Query: 148 -ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
++ + + K K L+K P
Sbjct: 129 TPCESFWTESQLVDGDKCPDCGRETYVAKEEAYFFKLSKYEDRIKELFKNPNYCFP 184
>gi|110633935|ref|YP_674143.1| methionyl-tRNA synthetase [Mesorhizobium sp. BNC1]
gi|110284919|gb|ABG62978.1| methionyl-tRNA synthetase [Chelativorans sp. BNC1]
Length = 517
Score = 41.2 bits (95), Expect = 0.34, Method: Composition-based stats.
Identities = 24/134 (17%), Positives = 42/134 (31%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A +I D L R R + V +T D+ K+++ AR+E +
Sbjct: 17 GRPHIGHAYELIATDALARFQRCDGKD-----VMFLTGTDEHGIKMLQTARKEGITAG-- 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+ +N +F + L H + + + G Y
Sbjct: 70 ----ELADRNAPEFQRMAKLLNASNDDFIRTTEERHRTASQAIWKAMADRGDIYLGGYSG 125
Query: 153 IFDTSSIPNYGSFS 166
+ YG
Sbjct: 126 WYSVRDEAYYGEDE 139
>gi|300741759|ref|ZP_07071780.1| methionine--tRNA ligase [Rothia dentocariosa M567]
gi|300380944|gb|EFJ77506.1| methionine--tRNA ligase [Rothia dentocariosa M567]
Length = 515
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 9/129 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A I DVL R R + V ++ TD + + +
Sbjct: 19 PHIGHAYETIAADVLARFKRLDGFD--VRFMTG-TD-----EHGQKMQTTAEKQGKTAKE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ +F L +H + + + +G Y +
Sbjct: 71 LADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAGWYSVR 130
Query: 158 SIPNYGSFS 166
Y
Sbjct: 131 DEAYYAEDE 139
>gi|311113865|ref|YP_003985087.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
gi|310945359|gb|ADP41653.1| methionine--tRNA ligase [Rothia dentocariosa ATCC 17931]
Length = 515
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 9/129 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A I DVL R R + V ++ TD + + +
Sbjct: 19 PHIGHAYETIAADVLARFKRLDGFD--VRFMTG-TD-----EHGQKMQTTAEKQGKTAKE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ +N+ +F L +H + + + +G Y +
Sbjct: 71 LADENSARFKAMNDALGISYDRFIRTTDPDHYEASQAIWKRMEENGDIYLDKYAGWYSVR 130
Query: 158 SIPNYGSFS 166
Y
Sbjct: 131 DEAYYAEDE 139
>gi|295396171|ref|ZP_06806353.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
gi|294970959|gb|EFG46852.1| methionine--tRNA ligase [Brevibacterium mcbrellneri ATCC 49030]
Length = 527
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 21/160 (13%), Positives = 40/160 (25%), Gaps = 9/160 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
HIG+A I D + R R + V + TD + + +
Sbjct: 14 GAPHIGHAYEYIASDTIARFKRLTGED--VFMLTG-TD-----EHGLKMQQSAQKAGITP 65
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ KN F L +H L + + G Y +
Sbjct: 66 RELADKNAAGFRALHDALGSSYDRFIRTTDPDHYTASQDLWKKMDEAGDIYLDTYAGWYS 125
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + ++ + + + +K
Sbjct: 126 VRDEAYYAADETEVREDGERYAIATGTPVEWTEEESYFFK 165
>gi|326519092|dbj|BAJ96545.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 635
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 42/147 (28%), Gaps = 26/147 (17%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R V YV TD RA +E
Sbjct: 64 PYVNNVPHLGNIIGCVLSADVFARYCRLRG--HNVLYVCG-TDEYGTA----TENRALEE 116
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S I K + H R + I +
Sbjct: 117 GCS------PLQICDKYHAIHKEVYEWFNI-NFDHFGRTST------PQQTEICQSIFSK 163
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
+N + + + Y +R + ++
Sbjct: 164 LLDNNWLSENTMQQLYCESCQRFLADR 190
>gi|72382161|ref|YP_291516.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|123732640|sp|Q46L15|SYL_PROMT RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|72002011|gb|AAZ57813.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 862
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DVL R R V + D + E+ +I +
Sbjct: 58 HMGHVRNYVITDVLARYKRMKGF--NVLHPMG---WD------SFGLPAENAAIEREISP 106
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
S T KN Q RL + T + Y+ + + AY+ +
Sbjct: 107 STWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEEYYKWTQYIFNQLHKNNLAYQKKATVN 166
Query: 154 FDT 156
+D
Sbjct: 167 WDP 169
>gi|224531956|ref|ZP_03672588.1| lysyl-tRNA synthetase [Borrelia valaisiana VS116]
gi|224511421|gb|EEF81827.1| lysyl-tRNA synthetase [Borrelia valaisiana VS116]
Length = 521
Score = 41.2 bits (95), Expect = 0.35, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ + V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSG--EKVRFI 64
>gi|154245393|ref|YP_001416351.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
gi|154159478|gb|ABS66694.1| leucyl-tRNA synthetase [Xanthobacter autotrophicus Py2]
Length = 894
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R ++ DVL R R
Sbjct: 63 GRIHIGHGRNYVMGDVLARYKRMQGFN 89
>gi|111115492|ref|YP_710110.1| lysyl-tRNA synthetase [Borrelia afzelii PKo]
gi|216263427|ref|ZP_03435422.1| lysyl-tRNA synthetase [Borrelia afzelii ACA-1]
gi|27805744|sp|Q937W6|SYK_BORAF RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|16304830|emb|CAC95160.1| class 1 lysyl-tRNA synthetase [Borrelia afzelii]
gi|110890766|gb|ABH01934.1| lysyl-tRNA synthetase [Borrelia afzelii PKo]
gi|215980271|gb|EEC21092.1| lysyl-tRNA synthetase [Borrelia afzelii ACA-1]
Length = 521
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSG--SKVRFI 64
>gi|332828957|gb|EGK01640.1| methionyl-tRNA synthetase [Dysgonomonas gadei ATCC BAA-286]
Length = 680
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 39/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ I D+ R LR E V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYIPADIYVRYLRLKGQE--VIHIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
+ I K K R ++ H + +G
Sbjct: 70 T------PQDIVDKYHAIIKKSFEDFGIS-FDIYSRTSSEIHKQTASDFFLKLYQNGDFE 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E FD + +
Sbjct: 123 EKTSEQYFDEEAQMFLADRYIMGECPHCGNPNAYGDQCESC 163
>gi|124023178|ref|YP_001017485.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|123963464|gb|ABM78220.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 515
Score = 41.2 bits (95), Expect = 0.36, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 51/182 (28%), Gaps = 15/182 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ + D L R R V +T +D+ KI A + S
Sbjct: 13 VNDKPHLGSLYTTMASDALARFQRLEG-----KQVMFVTGVDEHGQKIQRTAEVNNISPQ 67
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
IT + + + + H + Q + G Y +
Sbjct: 68 --QHCDQITRSYQNLW---SRWDISNDRFIRTTSHRHQLLVEAFFQRVETSGDVYLGRQQ 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + + P ++ + F L + + +E P
Sbjct: 123 GWYCVDCEEYKDEPPQAQSPSC-PIHQKPLEWRDEENLFFRLSRFQSQIEDLISQP-DFI 180
Query: 212 RP 213
P
Sbjct: 181 WP 182
>gi|262067595|ref|ZP_06027207.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291378710|gb|EFE86228.1| methionine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 640
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 31/256 (12%), Positives = 61/256 (23%), Gaps = 27/256 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + +V T +D+ K+ + A Q +
Sbjct: 17 VNGDPHVGSAYTTIAADVINRYNKAMGMDTH--FV---TGLDEHGQKVEQAAEQNGFT-- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
T K T F L H + +++ + G Y+
Sbjct: 70 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEERHKKAVKKILEIVHAKGDIYKGEY 125
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGW 204
+ + + K L K P +
Sbjct: 126 KGKYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHI-DEHPDF 184
Query: 205 ESPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE 259
P R ++ ++S + I + + + A
Sbjct: 185 ILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFEN 244
Query: 260 KTANIWIHNGFLNLEG 275
+
Sbjct: 245 DDKKFDKFWNDARVVH 260
>gi|319957076|ref|YP_004168339.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
gi|319419480|gb|ADV46590.1| methionyl-tRNA synthetase [Nitratifractor salsuginis DSM 16511]
Length = 651
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 48/184 (26%), Gaps = 18/184 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R E +T D+ KI E A++ S
Sbjct: 17 VNDIPHIGHAYTTIIADTLAIYSRMAGLETFF-----LTGTDEHGQKIEEAAKKRGKSPK 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE--AN 149
+ I+ + + + + +H + + + G Y+
Sbjct: 72 --EYADEISGRFKALWDE---FDISYDKFIRTTDEDHKLGVQAAFKKMYEKGDIYKDVYR 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + L K + +
Sbjct: 127 GHYCISCEAFFTETQLVDGEFCPECGKPTQIVEEESYFFR---LSKYQDKLLEWYRENEK 183
Query: 210 RGRP 213
P
Sbjct: 184 CILP 187
>gi|317504517|ref|ZP_07962493.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
gi|315664378|gb|EFV04069.1| methionine--tRNA ligase [Prevotella salivae DSM 15606]
Length = 687
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 21/170 (12%), Positives = 45/170 (26%), Gaps = 24/170 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------LRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + + H + + G E +
Sbjct: 72 ----PQDVCDRYHKLIKESFKEFGISFDVYSRTTSKTHSLMASDFFKKLYDDGKLVEKES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E +D + +K +D + P
Sbjct: 128 EQYYDEEAKQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPH 177
>gi|158422191|ref|YP_001523483.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
gi|172048039|sp|A8IMK0|SYL_AZOC5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|158329080|dbj|BAF86565.1| leucyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
Length = 874
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R ++ DVL R R
Sbjct: 47 GRIHIGHGRNYVMGDVLARYKRMQGFN 73
>gi|16304834|emb|CAC95162.1| class 1 lysyl-tRNA synthetase [Borrelia hermsii]
Length = 514
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 48/388 (12%), Positives = 101/388 (26%), Gaps = 37/388 (9%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERA-RQEH 87
G T HIGN R +I D++ R L+ + V ++ N D+ K+ + QE
Sbjct: 22 GITPSGTVHIGNFREVISVDLVARALKDAG--RNVRFIYSWDNY-DVFRKVPKNMPNQEL 78
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + AI+ + T Q R + P+ I + ++ +
Sbjct: 79 LTTHLRQAITRVPDTQTNQ--SSYARANEVEFEKYLPIVGIKPEFIDQSLKYMSSDYSSQ 136
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK------NPADFILWKRSTPME 201
+ + K+ + + + N +
Sbjct: 137 IKFALDHKDEIEKVLNKYRTTKLADNWYPISIFCTKCNRDTTTIKNYNHCYSIEYCCECG 196
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC-ADRIEK 260
+ + + D G D + +
Sbjct: 197 NKESLDLRKTWAVKLPWRIDWPMRWKYENVDFEPAGKDHHSSGGSFDTSIEIVKIFGGTP 256
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLE---------------TKKFGGRSWPAP 305
+ G K+S S+G+ ++ ++LE S+
Sbjct: 257 PITFQYDFISIKGRGGKISSSSGDVGSLKDVLEIYTPEVTRFLFASTKPNTEFSISFDLD 316
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
VI++ + + + + S K + L+T+ I
Sbjct: 317 VIKIYEDYDKFERVYYGIDDIKENKKEAFKRIYELSQPKLPDKEIPYQIGFRHLSTICQI 376
Query: 366 -----QALHKLARESTKNHDLLPIFNAS 388
+ KL + K + N
Sbjct: 377 FEGDKDKIFKLLNDV-KESQKAKLINKI 403
>gi|85715531|ref|ZP_01046512.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
gi|85697726|gb|EAQ35602.1| methionine--tRNA ligase [Nitrobacter sp. Nb-311A]
Length = 695
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 35 VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
VY HIG+A I D L R R K V + +T D+ K+++ A++E
Sbjct: 193 VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGQKMVQTAQRE--- 244
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEA 148
N + + ++N + K L + + H + + + + +G Y +
Sbjct: 245 ---NISALELATRNAELLRKLDETLHISFDRFIRTSESAHHRSVQEIWKRMAENGDIYLS 301
Query: 149 NNEIIFDTSSIPNYGSFS 166
N + Y
Sbjct: 302 NYSGWYSVRDEAYYAEDE 319
>gi|117924014|ref|YP_864631.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
gi|238685476|sp|A0L5I2|SYR_MAGSM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|117607770|gb|ABK43225.1| arginyl-tRNA synthetase [Magnetococcus sp. MC-1]
Length = 575
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT H+G+ R + DVL R+L
Sbjct: 132 PT--GPMHVGHGRGAVTGDVLARILECAGY 159
>gi|317146103|ref|XP_001821294.2| methionyl-tRNA synthetase [Aspergillus oryzae RIB40]
Length = 574
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 16/163 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ MI+ D+L R R GE + +T D+ KI + A
Sbjct: 65 VNAAPHVGHLYTMIIADILKRW-RTLCGETD---AQLLTGTDEHGMKIQQAALAAEMDTQ 120
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ T +D + A + + R T H + Y + + G+ Y +
Sbjct: 121 AFCDMNYKT-------FEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIYTSK 173
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+E + S Y + G + ++
Sbjct: 174 HEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWS 216
>gi|238491664|ref|XP_002377069.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
gi|220697482|gb|EED53823.1| methionyl-tRNA synthetase, putative [Aspergillus flavus NRRL3357]
Length = 574
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 54/163 (33%), Gaps = 16/163 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ MI+ D+L R R GE + +T D+ KI + A
Sbjct: 65 VNAAPHVGHLYTMIIADILKRW-RTLCGETD---AQLLTGTDEHGMKIQQAALAAEMDTQ 120
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ T +D + A + + R T H + Y + + G+ Y +
Sbjct: 121 AFCDMNYKT-------FEDLAKAANMDYNYFIRTTEAAHKKSVQYFWEMLDHRGYIYTSK 173
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+E + S Y + G + ++
Sbjct: 174 HEGWYSVSDETFYPPSQVHNSLDPTTGRKRMVSAETGKEVEWS 216
>gi|218960775|ref|YP_001740550.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
[Candidatus Cloacamonas acidaminovorans]
gi|167729432|emb|CAO80343.1| Methionyl-tRNA synthetase (Methionine--tRNA ligase) (MetRS)
[Candidatus Cloacamonas acidaminovorans]
Length = 678
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 23/191 (12%), Positives = 44/191 (23%), Gaps = 15/191 (7%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIG+ + D+ R LR + V Y+ TD + I A +E +
Sbjct: 17 HIGHLAGAYLPADIFVRYLRLKGED--VIYICG-TD-EHGTPISITADKEGIT------P 66
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + K + + H + G+ N +
Sbjct: 67 QEVVNYYHNSIKKAFEGIGIEFDNFSGTSRPPHYKLAADFFLQLYNKGYIKPKNTLQFYC 126
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP-MEPGWESPWGRGRPG 214
I K + P + +P +
Sbjct: 127 EKDKRYLPDRYVEGICPLCGFEDARGDQCDKCGQIYETTTLIEPKCKICGSTPVIKETKH 186
Query: 215 WHIECSAMSSH 225
W ++
Sbjct: 187 WFLQLEGFREK 197
>gi|321309631|ref|YP_004191960.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
gi|319801475|emb|CBY92121.1| arginyl-tRNA synthetase [Mycoplasma haemofelis str. Langford 1]
Length = 557
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 54/406 (13%), Positives = 106/406 (26%), Gaps = 65/406 (16%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
PT HIG+AR I D L LL Y Y+ N + +
Sbjct: 127 PT--GLLHIGHARNGIFSDTLANLLEYGGYFVHREYLVN------------NLGNQIKEL 172
Query: 93 NDAISIITSKNTQQFVKDTTRLACL---------APTHQPRATNHIPQMIYLIQNIILHG 143
++I I K + + H + I+
Sbjct: 173 LESIWI---KYKAKLTSIPRESNTKVVKYNGKEIDECVDYLISTHGQRWIFDRNIFESKS 229
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK----------NPADFIL 193
+ + + + I + +++ K + D +
Sbjct: 230 YPELEKLVVSYFLNEIEKDLARYNIEVNAWKFESSFVNDESINDLFKSMKEYLRVKDGAI 289
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIE-CSAMSSHYL------GKVFDIHGGGLDLIFPHHE 246
W ++ + G + G H C + H + I+ G D + H +
Sbjct: 290 WFKAGEILDGCKDEVLIKNDGKHTYYCQDLIYHLYKLSLLGNEGKIINILGSDH-YGHID 348
Query: 247 NEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPV 306
A + + + +E + K + + L + +
Sbjct: 349 KLKAFLKLKEVDDDRVHFICMQLVKLMEHSTLVKISKRDSKVIYLRDLMNYM----TYEE 404
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
R ++ H P++ +QRL + + I + D + +
Sbjct: 405 ARWFLVSQHPDSPLEIDIQRLKQKNYNNPAFYVMYAY-SRIFQILRKHGEPDFYSKK--E 461
Query: 367 ALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
L K + I + L ++ I AIE L
Sbjct: 462 VLFKTITD--------GIEKTIMNTL------MQWDEVIHEAIETL 493
>gi|303326810|ref|ZP_07357252.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
gi|302862798|gb|EFL85730.1| methionine--tRNA ligase [Desulfovibrio sp. 3_1_syn3]
Length = 665
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 24/160 (15%), Positives = 45/160 (28%), Gaps = 15/160 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D L R + + +T D DKI++ A ++ +
Sbjct: 13 VNANPHLGHAYTTIVADSLARFHKLLGEDTLF-----LTGTDEHGDKIVQAAEKQGQTPK 67
Query: 92 INDAISIITSKNTQQFVK---DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
+ + I+ + + + R R Q +Y +I
Sbjct: 68 --EFVDDISGRFRALWPQLGIANDRFVRTTDEAHKRTVQDFLQKVYDAGDIYFGEFGGHY 125
Query: 149 NNEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ + N E + K
Sbjct: 126 CYGCERFYTEKELENGLCPQHLTKPEFISEKNYFFRMSKY 165
>gi|294496538|ref|YP_003543031.1| lysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
gi|292667537|gb|ADE37386.1| lysyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
Length = 527
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 47/312 (15%), Positives = 90/312 (28%), Gaps = 35/312 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T H+GN R ++ D YR L + Y I D D + ++ + +
Sbjct: 27 GITPSGHIHVGNMREVVTADAAYRALLDRDANAELIY---IADTYDPLRKVYPFLDESYE 83
Query: 86 EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAP----THQPRATNHIPQMIYL 135
EH P+++ Q F+K RL ++ + +
Sbjct: 84 EHVGKPLSEIPCPCGECKNYADHFLQPFLKSLHRLGIKPEVYLADELYKSGRYNEGIKTA 143
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
++ + + P + T E+ +
Sbjct: 144 LKKRDKIAAILKEVSGRQPGDDWSPFNPICMQCGKINTTRVTSFDEREETVDYTCSCGHS 203
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ PM+ G + W P LG + G ++ +
Sbjct: 204 GTVPMQGGGKLTWRVDWPAR--------WQILGVTVEPFGKDHASRGGSYDTGKRIAREI 255
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E I + + MS S G ++I ++L + P V+R ++ T
Sbjct: 256 FGCEPPHPIVYEW-IMLGKEGAMSSSTGVVVSIADML-------KVVPPEVLRYLIIRTK 307
Query: 316 YREPIDFTVQRL 327
+ I F +
Sbjct: 308 PEKHIRFDPAQP 319
>gi|227501185|ref|ZP_03931234.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
gi|227216586|gb|EEI81990.1| methionine--tRNA ligase [Anaerococcus tetradius ATCC 35098]
Length = 645
Score = 41.2 bits (95), Expect = 0.37, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 51/177 (28%), Gaps = 17/177 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN ++ DVL R + +T T D+ KI++ A+ +
Sbjct: 21 HIGNTYTSVIADVLKRYKNLLGYDTFLT-----TGTDEHGQKIMKSAQDAGVNPQAFVD- 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I S+ + + K + H + + + G Y+ + + T
Sbjct: 75 -KIASETIELWKKLEIDY---DRFIRSTEKQHEEDVKNIFTKLYEQGDIYKGEYKGYYCT 130
Query: 157 SSIPN----YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + E Y + K P + P
Sbjct: 131 PCETFWTEAQLEDGKCPDCGRDVDYQEEETYFFRLSKYTDRLKELFKDHPEFLEPAF 187
>gi|311273019|ref|XP_003133692.1| PREDICTED: ATP-binding cassette sub-family A member 12-like [Sus
scrofa]
Length = 2040
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 30/156 (19%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F
Sbjct: 1133 NFTDRDDKILTRGERLDGFGLLLKKIMAIL---IKRFHHTRRNWKGFIAQVILPIVFVTT 1189
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + +
Sbjct: 1190 AMGLGTLRNSSNNYPEIQISPSLYGTSEQTAFYANYHPSTKNLVSAMWSFPGMDNICLNT 1249
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
W S CS
Sbjct: 1250 SDPRCLKKDSLGKWNSSGEPITNFGVCSCSENIQEC 1285
>gi|158423799|ref|YP_001525091.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
gi|158330688|dbj|BAF88173.1| methionyl-tRNA synthetase [Azorhizobium caulinodans ORS 571]
Length = 526
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 20/132 (15%), Positives = 40/132 (30%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
H+G+A I D + R R + V ++ TD I K+++ A++ +
Sbjct: 26 PHMGHAYEAIATDCIARFKRLDGYD--VRFLTG-TDEHGI--KMLQTAQKAGLT------ 74
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N F HI + + + G Y++ +
Sbjct: 75 PRELLDRNVPAFKAMGPAFNLSNDDFIRTTEERHIKSSQAIWERMAAKGDIYKSTYSGWY 134
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 135 SVRDEAYYAEDE 146
>gi|332797060|ref|YP_004458560.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
gi|332694795|gb|AEE94262.1| arginyl-tRNA synthetase [Acidianus hospitalis W1]
Length = 623
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L ++L+ E V + N
Sbjct: 121 HIGHLRNAILGDTLAKMLKARGHEVNVRFYVN 152
>gi|301166931|emb|CBW26510.1| Lysyl-tRNA synthetase [Bacteriovorax marinus SJ]
Length = 527
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 61/416 (14%), Positives = 113/416 (27%), Gaps = 63/416 (15%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KI-IERARQ 85
G T H GN R +I D + R LR K V + I DD K+ + +Q
Sbjct: 35 GITPSGVVHFGNFREVITVDFVARALRDRG--KKVRF---IFSWDDYDTFRKVPLNLPKQ 89
Query: 86 EHPSIPINDAI----------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL 135
E + I + + Q F ++
Sbjct: 90 EELKEYLFRPIVDTPDPFEEAESYAAHHEQNFEAQLDKVGVEVQPIYQAKKYRAGDYKEQ 149
Query: 136 IQNIIL---------HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
I+ + + + + + S +I + ++ K+
Sbjct: 150 IRKALEMKKDIAGILNEYRSTPYGDEYYPISVYCEKYLTDETEIIDWDGKNKITYKHKVH 209
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHE 246
+ I + + ++ W W ++ + D GG D
Sbjct: 210 DYTGEIDLETTDKVKLPWRVDWPM--------------RWVYEGVDFEPGGKDHSSQGGS 255
Query: 247 NEIAQ-SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
A+ E + + G KMS S GN IT+N++L + +
Sbjct: 256 YTTAKDIVKLYGGEAPVYLQYDFVSIKGAGGKMSSSKGNLITVNDVL-------KVYEPE 308
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
++R Y+ +DF V + + + ++ +
Sbjct: 309 MVRWIFAS--YKSNVDFAVSFDLDVLKTYEDFDRQERLAFGVEQGNEKKVNMAKRVYELS 366
Query: 366 QALHKLARESTKNHDLLPIFNASAHILGIEVCK-EHLNKNISIAIEKLVQERLILL 420
E K P F ++L I E + I+ ER
Sbjct: 367 S-----IGEIPKEMPFQPSFRHLCNVLQINDGNIEKAKSYYASEIK---NERDERR 414
>gi|323457135|gb|EGB13001.1| hypothetical protein AURANDRAFT_18800 [Aureococcus anophagefferens]
Length = 584
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R+L + + + V +V
Sbjct: 134 MHVGHLRSTIIGDTICRVLEFCGHDVRRVNHV 165
>gi|254251693|ref|ZP_04945011.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124894302|gb|EAY68182.1| Methionyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 901
Score = 41.2 bits (95), Expect = 0.38, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 214 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 262
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 263 -PKQLIERVWAEHKRDFDSFGVSFDNFYTTDSEENRVLSEKIYVALKENGLIAEREIEQA 321
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 322 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 368
>gi|325292849|ref|YP_004278713.1| methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
gi|325060702|gb|ADY64393.1| Methionyl-tRNA synthetase [Agrobacterium sp. H13-3]
Length = 516
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDGMD--VFF---LTGTDEHGQKMQQTARAEGIS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ QF + L H + + G Y+ + +
Sbjct: 69 PEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
YG
Sbjct: 129 SVRDEAYYGEDE 140
>gi|323527344|ref|YP_004229497.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323384346|gb|ADX56437.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 863
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIEGRGWRSGALVEKREIPMYYM 193
>gi|255027361|ref|ZP_05299347.1| cysteinyl-tRNA synthetase [Listeria monocytogenes FSL J2-003]
Length = 39
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 10/28 (35%), Positives = 12/28 (42%)
Query: 428 ADYIRKQLESKGFILEDYKNPDNGQRMT 455
AD IR L+ K ILED +
Sbjct: 1 ADEIRDILKEKNIILEDTAQGTRFRTGV 28
>gi|253577326|ref|ZP_04854644.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
gi|251843330|gb|EES71360.1| arginyl-tRNA synthetase [Paenibacillus sp. oral taxon 786 str. D14]
Length = 624
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 19/67 (28%)
Query: 13 RKITEFQ--AIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
R+ + +I+P+ AHIG+ R + D L RLL+ + V
Sbjct: 116 REKVVIEHTSINPNK------------SAHIGHLRNACIGDSLARLLKRAGYQIEVH--- 160
Query: 71 NITDIDD 77
N IDD
Sbjct: 161 NY--IDD 165
>gi|296329050|ref|ZP_06871556.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
gi|296153854|gb|EFG94666.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum
ATCC 23726]
Length = 636
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 36/262 (13%), Positives = 72/262 (27%), Gaps = 30/262 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + +V T +D+ K+ + A+Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMDTH--FV---TGLDEHGQKVEQAAKQNGFT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
T K T F T L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWTALDIKYDDFIRTTEDRHKKAVKRILDIVNAKGDIYKGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGW 204
+ + + K L K P +
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKDLTVLKEESYFFKMSKYADALLKHI-DEHPDF 181
Query: 205 ESPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---D 256
P R ++ ++S + I + + + A +
Sbjct: 182 ILPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIDFAPGHITYVWFDALTNYITSAGFEN 241
Query: 257 RIEKTANIWIHNGFLNLEGRKM 278
K W ++ ++L G+ +
Sbjct: 242 DENKFDKFWNNSRVVHLIGKDI 263
>gi|229074100|ref|ZP_04207147.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
gi|228708994|gb|EEL61120.1| Methionyl-tRNA synthetase [Bacillus cereus Rock4-18]
Length = 660
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|260817050|ref|XP_002603400.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
gi|229288719|gb|EEN59411.1| hypothetical protein BRAFLDRAFT_80392 [Branchiostoma floridae]
Length = 531
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 47/336 (13%), Positives = 88/336 (26%), Gaps = 78/336 (23%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+ ++ D ++R + V T D+ KI + A
Sbjct: 9 PHLGHLYSAVLADTIHRWQQLKGAGGSVF----STGTDEHGLKIQQAALAHGKDPQ--QF 62
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++ F K + + H + + + + G+ Y+ E +
Sbjct: 63 CDDVSRHFRDLFSKSH---VGHTDFIRTTESRHRKAVEHFWRKLQSAGYIYQGKYEGWYS 119
Query: 156 TSSIPNYGSFSRRKIDEQ--------------KMGTRVPEKYHKKNPADFILWKRSTPME 201
TS + ++ ++ E Y +
Sbjct: 120 TSDEAFVPDNKVMESVDKATGKDIKVSIETGSQVEWMKEENYMFRLSEFGPRLLEWLDSN 179
Query: 202 P-------------GWES---------------PWGRGRPGWHIE--------------- 218
P GW PWG P +
Sbjct: 180 PRAVYPDKYRTLVRGWLGEGLEDLSVSRQRDRLPWGIPVPDDPTQTIYVWLDALVNYLTV 239
Query: 219 CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKM 278
C +H+ D H G D++ H A A + + +E +KM
Sbjct: 240 CGYPDNHHAHWPADCHVVGKDIVRFHAVYWPAFLMAAGLDPP--RSVVTHSHWLMESQKM 297
Query: 279 SKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
SKS GN + + + + A +R +L
Sbjct: 298 SKSKGNVVDPFD-------RIQRYSADGLRYFLLKH 326
>gi|148284148|ref|YP_001248238.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
gi|166225525|sp|A5CCE0|SYV_ORITB RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|146739587|emb|CAM79339.1| valyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
Length = 854
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
PTV HIG+A I D + R R
Sbjct: 46 PTVSGDLHIGHAMSFIQLDCIVRYQRMLG 74
>gi|121606674|ref|YP_984003.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
gi|166231627|sp|A1VTV4|SYL_POLNA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|120595643|gb|ABM39082.1| leucyl-tRNA synthetase [Polaromonas naphthalenivorans CJ2]
Length = 888
Score = 41.2 bits (95), Expect = 0.39, Method: Composition-based stats.
Identities = 32/200 (16%), Positives = 53/200 (26%), Gaps = 24/200 (12%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
Y C Y H+G+ R + D+L R LR V D A
Sbjct: 36 YACSMLPYPSGKLHMGHVRNYTINDMLSRYLRMKGY--NVLMPMG---WD------AFGL 84
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ + T N K + + AT + +L ++
Sbjct: 85 PAENAALKNGVPPAQWTYDNIAYMKKQMQAMGLAVDWSREIATCDPSYYKWNQWLFLKML 144
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWK 195
G AY + +D + + G V ++ L
Sbjct: 145 EKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVEKREIPGYYLKITDYAEELLG 204
Query: 196 RSTPMEPGWESPWGRGRPGW 215
PGW + W
Sbjct: 205 SVQHKLPGWPERVKLMQENW 224
>gi|315221903|ref|ZP_07863814.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
gi|315188869|gb|EFU22573.1| methionyl-tRNA synthetase [Streptococcus anginosus F0211]
Length = 665
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 18/87 (20%), Positives = 31/87 (35%), Gaps = 8/87 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDS 74
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP 123
+ K + + +
Sbjct: 75 MAVGVKELWELLDISYDKFIRTTDDYH 101
>gi|311028969|ref|ZP_07707059.1| methionyl-tRNA synthetase [Bacillus sp. m3-13]
Length = 663
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 13/53 (24%), Positives = 23/53 (43%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A + D + R R + V +T D+ KI +A ++ +
Sbjct: 22 HIGHAYTTVAGDAMARYKRLKGFD-----VMYLTGTDEHGQKIQRKAEEKGVT 69
>gi|224534460|ref|ZP_03675036.1| lysine--tRNA ligase [Borrelia spielmanii A14S]
gi|224514137|gb|EEF84455.1| lysine--tRNA ligase [Borrelia spielmanii A14S]
Length = 523
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSG--SKVRFI 64
>gi|189485353|ref|YP_001956294.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
gi|170287312|dbj|BAG13833.1| methionyl-tRNA synthetase [uncultured Termite group 1 bacterium
phylotype Rs-D17]
Length = 512
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 19/131 (14%), Positives = 41/131 (31%), Gaps = 9/131 (6%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
D HIG++ I D++ R R + V ++ TD A+ + +
Sbjct: 14 DIPHIGHSYTTIASDIMARWKRLKGFD--VFFLTG-TD-----EHGAKIVAAAKKKGEIP 65
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ K + +F + L H + ++ + G ++ E ++
Sbjct: 66 QKLCDKMSAKFKEAWELLNISYTDFIRTTERKHFVSVEKILSILFDKGFIFKKKYEELYC 125
Query: 156 TSSIPNYGSFS 166
Y
Sbjct: 126 IGCERFYAQKD 136
>gi|33863015|ref|NP_894575.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|33634932|emb|CAE20918.1| putative methionyl-tRNA synthetase [Prochlorococcus marinus str.
MIT 9313]
Length = 515
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 27/182 (14%), Positives = 50/182 (27%), Gaps = 15/182 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ + D L R R V +T +D+ KI A E +I
Sbjct: 13 VNDKPHLGSLYTTMASDALARFQRLEG-----KQVMFVTGVDEHGQKIQRTA--EGNNIS 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
IT + + + + H + + G Y +
Sbjct: 66 PKHHCDQITRSYQNLW---SRWGISNDRFIRTTSHRHQLLVEAFFHRVETSGDVYLGRQQ 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + P ++ + F L + + +E P
Sbjct: 123 GWYCVGCEEYKDEP-PQAQSPCCPIHQKPLEWRDEENLFFKLSRFQSKIEDLISQP-DFI 180
Query: 212 RP 213
P
Sbjct: 181 WP 182
>gi|212537687|ref|XP_002148999.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
18224]
gi|210068741|gb|EEA22832.1| methionyl-tRNA synthetase, putative [Penicillium marneffei ATCC
18224]
Length = 583
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 26/135 (19%), Positives = 51/135 (37%), Gaps = 16/135 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ DV+ R + + +T D+ KI + A++
Sbjct: 66 VNAAPHVGHLYSMVLGDVIKRWQQLKGNTNAIF----LTGTDEHGIKIQQAAQEAGMDTQ 121
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ + KD R A ++ H R T+ H + Y +++ G+ Y
Sbjct: 122 SFCDMN-------CKTFKDLARAAKISNDHFIRTTDEAHKDAVRYFWESLQHRGYIYTKK 174
Query: 150 NEIIFDTSSIPNYGS 164
+E + S Y
Sbjct: 175 HEGWYSVSDEAFYPQ 189
>gi|15888821|ref|NP_354502.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
gi|25009368|sp|Q8UFA2|SYM_AGRT5 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|15156579|gb|AAK87287.1| methionyl-tRNA synthetase [Agrobacterium tumefaciens str. C58]
Length = 516
Score = 41.2 bits (95), Expect = 0.40, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDGMD--VFF---LTGTDEHGQKMQQTARAEGIS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ QF + L H + + G Y+ + +
Sbjct: 69 PEELAQRNSDQFREMGKLLNASNDDFIRTTEERHHETSRNIWNLMADSGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYAEDE 140
>gi|91782348|ref|YP_557554.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
gi|123063115|sp|Q143I7|SYM_BURXL RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|91686302|gb|ABE29502.1| methionyl-tRNA synthetase [Burkholderia xenovorans LB400]
Length = 710
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYV----GADDTHGTPVMLRAEKEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + ++ + + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPY 186
>gi|89899568|ref|YP_522039.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
gi|123091480|sp|Q220P5|SYL_RHOFD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|89344305|gb|ABD68508.1| leucyl-tRNA synthetase [Rhodoferax ferrireducens T118]
Length = 892
Score = 40.8 bits (94), Expect = 0.40, Method: Composition-based stats.
Identities = 31/202 (15%), Positives = 56/202 (27%), Gaps = 24/202 (11%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + D+L R LR V D A
Sbjct: 34 KFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGY--NVLMPMG---WD------AF 82
Query: 85 ---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
E+ ++ + T +N + + + AT + +L
Sbjct: 83 GLPAENAALKNGVPPAQWTFENIAYMKQQMQAMGLAIDWSREVATCDPSYYKWNQWLFLK 142
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----L 193
++ G AY + +D + + G V ++ L
Sbjct: 143 MLDKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVEKREIPGYYLKITDYAEEL 202
Query: 194 WKRSTPMEPGWESPWGRGRPGW 215
+ PGW + W
Sbjct: 203 LGQVQTGLPGWPERVKLMQENW 224
>gi|296162307|ref|ZP_06845101.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
gi|295887461|gb|EFG67285.1| methionyl-tRNA synthetase [Burkholderia sp. Ch1-1]
Length = 710
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYV----GADDTHGTPVMLRAEKEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + ++ + + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIDARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELINPY 186
>gi|307594840|ref|YP_003901157.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307550041|gb|ADN50106.1| leucyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 1013
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
P V HIG+ R + D++ R R
Sbjct: 54 PYVSGSPHIGHGRTFTIGDIIARYKRARGFN 84
>gi|167042222|gb|ABZ06954.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
marine crenarchaeote HF4000_ANIW93I24]
Length = 951
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
TV Y + HIG+ R + DV R LR V +
Sbjct: 34 ITVAYPYPNSPQHIGHGRTYTITDVYSRYLRMKGF--NVLFPMGF 76
>gi|307730979|ref|YP_003908203.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307585514|gb|ADN58912.1| leucyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 863
Score = 40.8 bits (94), Expect = 0.41, Method: Composition-based stats.
Identities = 26/156 (16%), Positives = 48/156 (30%), Gaps = 17/156 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+YR LR V D A E+ ++ N
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGY--NVLMPMG---WD------AFGMPAENAAMANNVPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T N K + + AT + +L ++ G AY+ +
Sbjct: 98 AKWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYKWNQWLFLKMLEKGIAYKKTGTVN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+D + + + G V ++
Sbjct: 158 WDPVDQTVLANEQVIEGRGWRSGALVEKREIPMYYM 193
>gi|289641290|ref|ZP_06473456.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
Datisca glomerata]
gi|289508888|gb|EFD29821.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia symbiont of
Datisca glomerata]
Length = 879
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R E V Y DD
Sbjct: 71 PTVSGSLHVGHVFSYTHTDVIARYQRMRGRE--VFYPMGF---DD 110
>gi|257899755|ref|ZP_05679408.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
gi|257837667|gb|EEV62741.1| methionyl-tRNA synthetase [Enterococcus faecium Com15]
Length = 669
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI +A + +
Sbjct: 21 HIGNSYTTIACDAIARYKRLMGFD--VFY---LTGVDEHGQKIETKAEE------LGVKP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|257882321|ref|ZP_05661974.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
gi|257817979|gb|EEV45307.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,502]
Length = 669
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI +A + +
Sbjct: 21 HIGNSYTTIACDAIARYKRLMGFD--VFY---LTGVDEHGQKIETKAEE------LGVKP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|209528060|ref|ZP_03276539.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328]
gi|209491516|gb|EDZ91892.1| methionyl-tRNA synthetase [Arthrospira maxima CS-328]
Length = 83
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 18/58 (31%), Positives = 23/58 (39%), Gaps = 8/58 (13%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
V D HIG+A I D + R R E + IT D+ KI A + S
Sbjct: 20 VNDVPHIGSAYTTIAADAIARWKRLQGYEVLL-----ITGTDEHGQKIQRTAEEAGCS 72
>gi|76363441|sp|Q4J8J7|SYL2_SULAC RecName: Full=Leucyl-tRNA synthetase 2; AltName:
Full=Leucine--tRNA ligase 2; Short=LeuRS 2
Length = 942
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 6/24 (25%), Positives = 11/24 (45%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + D+ R +R
Sbjct: 42 HLGHGRTYVTGDIYARYMRMRGYN 65
>gi|332884352|gb|EGK04620.1| methionyl-tRNA synthetase [Dysgonomonas mossii DSM 22836]
Length = 680
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 39/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ I D+ R LR + V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYIPADIYVRYLRLKGED--VIHIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
+ I K K A R ++ H + G
Sbjct: 70 T------PQDIVDKYHGIIKKSFEDFGI-AFDIYSRTSSDIHKKTASDFFLTLHNKGAFE 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +
Sbjct: 123 EKTSEQYYDAEAQMFLADRYIMGECPHCGNPNAYGDQCESC 163
>gi|261208239|ref|ZP_05922912.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289565960|ref|ZP_06446399.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|293573149|ref|ZP_06684086.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
gi|294615978|ref|ZP_06695805.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
gi|294617639|ref|ZP_06697267.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
gi|260077496|gb|EEW65214.1| methionyl-tRNA synthetase [Enterococcus faecium TC 6]
gi|289162244|gb|EFD10105.1| methionyl-tRNA synthetase [Enterococcus faecium D344SRF]
gi|291591164|gb|EFF22846.1| methionyl-tRNA synthetase [Enterococcus faecium E1636]
gi|291596103|gb|EFF27368.1| methionyl-tRNA synthetase [Enterococcus faecium E1679]
gi|291606787|gb|EFF36172.1| methionyl-tRNA synthetase [Enterococcus faecium E980]
Length = 669
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI +A + +
Sbjct: 21 HIGNSYTTIACDAIARYKRLMGFD--VFY---LTGVDEHGQKIETKAEE------LGVKP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|86140954|ref|ZP_01059513.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
gi|85832896|gb|EAQ51345.1| methionyl-tRNA synthetase [Leeuwenhoekiella blandensis MED217]
Length = 693
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 43/164 (26%), Gaps = 21/164 (12%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK---IIERAR 84
Y GP HIG+ + D+ R LR K V Y+ D+ I +A+
Sbjct: 14 YTNGP-----IHIGHLAGVYVPADIYARYLR--GMGKDVAYICG---SDEHGVAISIKAK 63
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHG 143
+E + + K + + A H + + G
Sbjct: 64 KEGIT------PQEVVDKYHKIIKDSFEDFGISFDNYSRTSAQVHHDTASEFFKTLYAKG 117
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E E +FD + + +
Sbjct: 118 DFIEEVTEQLFDAEANQYLADRFVTGTCPKCGHEEAYGDQCENC 161
>gi|69248667|ref|ZP_00604797.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
subunit, C-terminal [Enterococcus faecium DO]
gi|227552442|ref|ZP_03982491.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
gi|257880089|ref|ZP_05659742.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257885518|ref|ZP_05665171.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257888319|ref|ZP_05667972.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257891180|ref|ZP_05670833.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257893993|ref|ZP_05673646.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|257896791|ref|ZP_05676444.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
gi|260560302|ref|ZP_05832478.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
gi|293378577|ref|ZP_06624740.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
gi|293557282|ref|ZP_06675829.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
gi|293563094|ref|ZP_06677560.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
gi|293567520|ref|ZP_06678865.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
gi|294623374|ref|ZP_06702233.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
gi|314940236|ref|ZP_07847409.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|314941705|ref|ZP_07848584.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|314947651|ref|ZP_07851060.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
gi|314950637|ref|ZP_07853717.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|314992496|ref|ZP_07857917.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|314996350|ref|ZP_07861403.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|68194356|gb|EAN08866.1| Methionyl-tRNA synthetase, class Ia:Methionyl-tRNA synthetase, beta
subunit, C-terminal [Enterococcus faecium DO]
gi|227178417|gb|EEI59389.1| methionine--tRNA ligase [Enterococcus faecium TX1330]
gi|257814317|gb|EEV43075.1| methionyl-tRNA synthetase [Enterococcus faecium 1,230,933]
gi|257821374|gb|EEV48504.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,501]
gi|257824373|gb|EEV51305.1| methionyl-tRNA synthetase [Enterococcus faecium 1,141,733]
gi|257827540|gb|EEV54166.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,410]
gi|257830372|gb|EEV56979.1| methionyl-tRNA synthetase [Enterococcus faecium 1,231,408]
gi|257833356|gb|EEV59777.1| methionyl-tRNA synthetase [Enterococcus faecium Com12]
gi|260073647|gb|EEW61973.1| methionyl-tRNA synthetase [Enterococcus faecium C68]
gi|291589763|gb|EFF21566.1| methionyl-tRNA synthetase [Enterococcus faecium E1071]
gi|291597221|gb|EFF28413.1| methionyl-tRNA synthetase [Enterococcus faecium U0317]
gi|291600569|gb|EFF30874.1| methionyl-tRNA synthetase [Enterococcus faecium E1039]
gi|291605008|gb|EFF34476.1| methionyl-tRNA synthetase [Enterococcus faecium E1162]
gi|292642906|gb|EFF61053.1| methionine--tRNA ligase [Enterococcus faecium PC4.1]
gi|313589493|gb|EFR68338.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a01]
gi|313592956|gb|EFR71801.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133B]
gi|313597184|gb|EFR76029.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133A]
gi|313599477|gb|EFR78320.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133C]
gi|313640556|gb|EFS05136.1| methionyl-tRNA synthetase [Enterococcus faecium TX0133a04]
gi|313645892|gb|EFS10472.1| methionyl-tRNA synthetase [Enterococcus faecium TX0082]
Length = 669
Score = 40.8 bits (94), Expect = 0.42, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI +A + +
Sbjct: 21 HIGNSYTTIACDAIARYKRLMGFD--VFY---LTGVDEHGQKIETKAEE------LGVKP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|18312411|ref|NP_559078.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|60390730|sp|Q8ZXT6|SYL_PYRAE RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|18159866|gb|AAL63260.1| leucyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
Length = 945
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYY 61
HIG+ R ++ DVL R R+
Sbjct: 47 GAIHIGHGRTYLIADVLARFHRHMG 71
>gi|269123753|ref|YP_003306330.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
gi|268315079|gb|ACZ01453.1| methionyl-tRNA synthetase [Streptobacillus moniliformis DSM 12112]
Length = 624
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 58/410 (14%), Positives = 102/410 (24%), Gaps = 75/410 (18%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP---- 91
HIG A I+ DV+ R VR IT ID+ KI E A + + +
Sbjct: 17 PHIGTAYTTIICDVVARYNNLKGKN-----VRLITGIDEHGQKIQESAEKNNVTPQQWVD 71
Query: 92 ------------INDAISIITSKN---TQQFVKDTTRLACLAPTHQPRA--TNHIPQMIY 134
+N S + V D R +
Sbjct: 72 KMKEDFINLWDILNIDYSEFVRTTSDKHKFTVGDIIRKVYENGDIYSGEYIGKYSVSEET 131
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ L Y I S S K+ + + + +
Sbjct: 132 FVTESQLVDGLYMGKPVIDMKEKSFFFKLSKYEDKLLKFYEEHPNFIRPNNRKNEVISFI 191
Query: 195 K------RSTPMEPGWESPWG----RGRPGWHIECSA----------MSSHYLGKVFDIH 234
K + W P W ++ + Y +H
Sbjct: 192 KQGLQDLSISRTTFNWGIPLELEKGHIVYVWFDALNSYLTAAGYNSEIFDIYWNNSEVVH 251
Query: 235 GGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE---- 290
G D++ H A A K ++ +G+ +G+KMSKS GN + +
Sbjct: 252 MVGKDILRFHAIIWPAMLMAAG--IKLPDVLAVHGWWTKDGQKMSKSLGNVVDPIDEVNK 309
Query: 291 ----------LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
L E + + + + + + +
Sbjct: 310 YGLDQFRYFLLREATFGQDADYSNMAVIQRINSDLANDLGNLLNRVIGMQNKYFDSIVYG 369
Query: 341 STSKGIIDPAVLSALYNDL----------NTVSAIQALHKLARESTKNHD 380
+D +++ L N ++ + K K D
Sbjct: 370 INELNDLDNEIINLWSETLKNIDIYYSEYNFSEMLKCIWKFISRLNKYID 419
>gi|229027885|ref|ZP_04184040.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
gi|228733399|gb|EEL84226.1| Methionyl-tRNA synthetase [Bacillus cereus AH1271]
Length = 660
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|229094760|ref|ZP_04225766.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
gi|229100827|ref|ZP_04231642.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
gi|229113713|ref|ZP_04243149.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228669710|gb|EEL25116.1| Methionyl-tRNA synthetase [Bacillus cereus Rock1-3]
gi|228682594|gb|EEL36656.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-28]
gi|228688628|gb|EEL42500.1| Methionyl-tRNA synthetase [Bacillus cereus Rock3-29]
Length = 660
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|187918515|ref|YP_001884078.1| lysyl-tRNA synthetase [Borrelia hermsii DAH]
gi|119861363|gb|AAX17158.1| class 1 lysyl-tRNA synthetase [Borrelia hermsii DAH]
Length = 521
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 48/388 (12%), Positives = 102/388 (26%), Gaps = 37/388 (9%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERA-RQEH 87
G T HIGN R +I D++ R L+ + V ++ N D+ K+ + QE
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDAG--RNVRFIYSWDNY-DVFRKVPKNMPNQEL 85
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + AI+ + T Q R + P+ I + ++ +
Sbjct: 86 LTTHLRQAITRVPDTQTNQ--SSYARANEVEFEKYLPIVGIKPEFIDQSLKYMSSDYSSQ 143
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK------NPADFILWKRSTPME 201
+ + K+ + + + N +
Sbjct: 144 IKFALDHKDEIEKVLNKYRTTKLADNWYPISIFCTKCNRDTTTIKNYNHCYSIEYCCECG 203
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC-ADRIEK 260
+ + + D G D + +
Sbjct: 204 NKESLDLRKTWAVKLPWRIDWPMRWKYENVDFEPAGKDHHSSGGSFDTSIEIVKIFGGTP 263
Query: 261 TANIWIHNGFLNLEGRKMSKSNGNFITINELLE---------------TKKFGGRSWPAP 305
+ G K+S S+G+ +++ ++LE S+
Sbjct: 264 PITFQYDFISIKGRGGKISSSSGDVVSLKDVLEIYTPEVTRFLFASTKPNTEFSISFDLD 323
Query: 306 VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
VI++ + + + + S K + L+T+ I
Sbjct: 324 VIKIYEDYDKFERVYYGIDDIKENKKEAFKRIYELSQPKLPDKEIPYQIGFRHLSTICQI 383
Query: 366 -----QALHKLARESTKNHDLLPIFNAS 388
+ KL + K + N
Sbjct: 384 FEGDKDKIFKLLNDV-KESQKAKLINKI 410
>gi|268536458|ref|XP_002633364.1| C. briggsae CBR-MRS-1 protein [Caenorhabditis briggsae]
gi|187034452|emb|CAP26269.1| CBR-MARS-1 protein [Caenorhabditis briggsae AF16]
Length = 921
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 19/183 (10%), Positives = 39/183 (21%), Gaps = 21/183 (11%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R + YV TD + E
Sbjct: 44 PYVNNVPHLGNIIGCVLSADVFARYCNLRGHQT--FYVGG-TD----------EYGTATE 90
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
++ + K T+H ++ + + +G
Sbjct: 91 TKALQEGCTPRELCDKYHAIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFLKLHKNGFT 150
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGW 204
+ +F + +
Sbjct: 151 TTQTVDQLFCNQCDKFLADRFVTGTCPNCAYDDARGDQCDGCGKLINAVELKDAKCHMCK 210
Query: 205 ESP 207
+P
Sbjct: 211 STP 213
>gi|256371339|ref|YP_003109163.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
gi|256007923|gb|ACU53490.1| methionyl-tRNA synthetase [Acidimicrobium ferrooxidans DSM 10331]
Length = 503
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 27/186 (14%), Positives = 47/186 (25%), Gaps = 20/186 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G A +I+ D + R + V +V T D+ KI + A S
Sbjct: 13 VNGDPHLGTAYAVILADAIARW--HRLIGDEVRFV---TGTDEHGLKIAQSAEAHGVSP- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EAN 149
A +TS ++ + H + ++ I G Y
Sbjct: 67 --QAWVDVTSAQFRRAWDALEV--SYDDFIRTTEPRHHRSVQRFLERIHDRGDIYLGTYE 122
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN-----PADFILWKRSTPMEPGW 204
+ G ++ + D +L E W
Sbjct: 123 GLYCVRCEAYYQPGELEPGELCPVHHVACERMREENYFFALSRYQDRLLEHYERHPEAIW 182
Query: 205 ESPWGR 210
Sbjct: 183 PESRRN 188
>gi|209875223|ref|XP_002139054.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
gi|209554660|gb|EEA04705.1| arginyl-tRNA synthetase family protein [Cryptosporidium muris RN66]
Length = 603
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 48/397 (12%), Positives = 103/397 (25%), Gaps = 31/397 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV--------RNITDIDDKIIERARQEHPS 89
H+G+ R I+ D + R+ Y E + +V +IE ++++P
Sbjct: 146 MHVGHLRSTIIGDTICRIFEYLGYEVFRINHVGDWGTQFGM--------LIEYLKEQYPD 197
Query: 90 IPINDA-ISIITSKN--TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
N IS + ++ + + P + I
Sbjct: 198 YTSNIPEISDLQEFYRSAKKKFDQDPEFKLRSQKVVVKLQGGDPTARAAWKKICEISRIE 257
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ SF I E + + + A I + +S
Sbjct: 258 FQKVYDRLNIHIEEYGESFYNDLIPEVILKMKEKGIIQLDDGAQCIFTSVNNIPLMAVKS 317
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
G G + + + I+ + +
Sbjct: 318 DGGYGYDSTDLAAIYYRLKEIRADWVIYITDSGQEEHFLKIFEVAKIMEWHNPPKTRLDF 377
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
+ + T+ + + R++ +I + I++
Sbjct: 378 VGFGVIQGEDGKKFKTRSGDTVKLVELLDEAVTRAYN-ELINRRLQNAKINGNIEYEDDD 436
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
L E + ++ + A++ L L IF
Sbjct: 437 LKEMAKKIGYAAVKYFDMKQNRLTNYKFSFDRMLDPKGNTAVYLLY----AYARLCAIFR 492
Query: 387 ASAHILGIEVCKEHLNKNISI-AIE-KLVQERLILLK 421
S G+ + + + +S +I + +ERLI LK
Sbjct: 493 RS----GLNLDNKSDIEILSSYSINIQQSEERLIALK 525
>gi|124515022|gb|EAY56533.1| Methionyl-tRNA synthetase [Leptospirillum rubarum]
Length = 673
Score = 40.8 bits (94), Expect = 0.43, Method: Composition-based stats.
Identities = 52/331 (15%), Positives = 91/331 (27%), Gaps = 68/331 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + + N
Sbjct: 21 VNDIPHIGHAYTTVACDVLARTGRMSG--RPVFFLTG-TD-----EHGQKVWQSAQKANL 72
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--ANNE 151
+ I + +F L HI + ++ + +G YE
Sbjct: 73 SPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEGW 132
Query: 152 IIF------------------------DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ SR + P+ ++
Sbjct: 133 YCLYDERFWTEKDVTEGLCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREHPDAIRPES 192
Query: 188 PADFILWKRSTPME------PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI-------- 233
+ I+ P+E P PWG P + + + L +
Sbjct: 193 RYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVPLSGPDGE 252
Query: 234 ----------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
H G D++ H A +E + +G+ + G KMSKS G
Sbjct: 253 SALKRLWPATHVVGKDILTTHAVYWPTLLH-AMGLEP-PRLIFAHGWWTVNGEKMSKSRG 310
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMT 314
N + + + +R +L
Sbjct: 311 NAVDPIQY-------AGKYGPDTLRYFLLRE 334
>gi|313204253|ref|YP_004042910.1| methionyL-tRNA synthetase [Paludibacter propionicigenes WB4]
gi|312443569|gb|ADQ79925.1| methionyl-tRNA synthetase [Paludibacter propionicigenes WB4]
Length = 679
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR E V +V IT +A++E
Sbjct: 18 GPVHIGHLAGVYVPADIYVRYLRLKGEE--VLFVGGSDEHGVPIT-------IKAKKEGV 68
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I + K + + H + + I
Sbjct: 69 T------PQDIVDRYHGIIKKSFEDFGISFDIYSRTTSKTHKELASEIFKTINDKDGFVI 122
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D ++ +
Sbjct: 123 QTSEQYYDETAQQFLADRYITGKCPHCGNENAYGDQCEAC 162
>gi|228918989|ref|ZP_04082369.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
gi|228840638|gb|EEM85899.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar
huazhongensis BGSC 4BD1]
Length = 660
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|206603843|gb|EDZ40323.1| Methionyl-tRNA synthetase [Leptospirillum sp. Group II '5-way CG']
Length = 673
Score = 40.8 bits (94), Expect = 0.44, Method: Composition-based stats.
Identities = 53/331 (16%), Positives = 91/331 (27%), Gaps = 68/331 (20%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+A + DVL R R + V ++ TD + + N
Sbjct: 21 VNDIPHIGHAYTTVACDVLARTGRMSG--RPVFFLTG-TD-----EHGQKVWQSAQKANL 72
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--ANNE 151
+ I + +F L HI + ++ + +G YE
Sbjct: 73 SPQIYVDRIMPRFRDLWKTLLISNDDFVRTTQPRHIRGVQSVLDRLWKNGEIYEGLYEGW 132
Query: 152 IIF------------------------DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ SR + PE ++
Sbjct: 133 YCLYDERFWTEKDVTEGLCPDCRRPVEQVRETNYFFRMSRHQDWLVSWYREHPEAIRPES 192
Query: 188 PADFILWKRSTPME------PGWESPWGRGRPGWHIECSAMSSHYLGKVFDI-------- 233
+ I+ P+E P PWG P + + + L +
Sbjct: 193 RYNEIMGFLEKPLEDLCISRPVSRLPWGIPLPFDNRYVTYVWFDALLNYVSVPLSGPDGE 252
Query: 234 ----------HGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
H G D++ H A +E + +G+ + G KMSKS G
Sbjct: 253 AALKRLWPATHVVGKDILTTHAVYWPTLLH-AMGLEP-PRLIFAHGWWTVNGEKMSKSRG 310
Query: 284 NFITINELLETKKFGGRSWPAPVIRLAMLMT 314
N + + + +R +L
Sbjct: 311 NAVDPIQY-------AGKYGPDTLRYFLLRE 334
>gi|326383789|ref|ZP_08205474.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
gi|326197553|gb|EGD54742.1| methionyl-tRNA synthetase [Gordonia neofelifaecis NRRL B-59395]
Length = 523
Score = 40.8 bits (94), Expect = 0.45, Method: Composition-based stats.
Identities = 24/162 (14%), Positives = 46/162 (28%), Gaps = 13/162 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPIND 94
HIG+A I DVL R + V + TD + K+ + A +E S
Sbjct: 23 GAPHIGHAYEFISADVLARFKALDGFD--VRFQSG-TD-EHGQKMQQTAEKEGVST---- 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + N+ +F L T+H + + + G Y +
Sbjct: 75 --AELAKTNSDRFEALHMALGTDLSRFIRTTDTDHHRASEEIWKRMEAAGDIYLDSYAGW 132
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + + + ++
Sbjct: 133 YDVRDEAFFTEDETTVDADGRRVATENGHVLTWTEEQTYFFR 174
>gi|222148592|ref|YP_002549549.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
gi|221735578|gb|ACM36541.1| methionyl-tRNA synthetase [Agrobacterium vitis S4]
Length = 525
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 24/138 (17%), Positives = 44/138 (31%), Gaps = 15/138 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+ + AR E A
Sbjct: 18 PHIGHAYELIATDAMARFQRLDG--KDVFF---LTGTDEHGQKMQQTARNEGI------A 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L H + + + +G Y+ + +
Sbjct: 67 PEELAKRNSDEFRAMGKLLNASNDDFIRTTEARHHAASQEIWKRMEKNGDIYKDSYAGWY 126
Query: 155 DTSSIPNYGSFSRRKIDE 172
Y +
Sbjct: 127 SVRDEAYYAEDETEMRAD 144
>gi|325969563|ref|YP_004245755.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323708766|gb|ADY02253.1| arginyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 643
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 17/34 (50%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R ++ D L RLLR+ V + N
Sbjct: 130 PMHIGHGRNAVLGDSLARLLRFCGASVRVHFYVN 163
>gi|319790089|ref|YP_004151722.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
gi|317114591|gb|ADU97081.1| arginyl-tRNA synthetase [Thermovibrio ammonificans HB-1]
Length = 547
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 17/30 (56%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT H+G+ R +V DVLYR++R
Sbjct: 126 PT--GPLHVGHGRGAVVGDVLYRIMRLTGY 153
>gi|282857419|ref|ZP_06266652.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
gi|282584704|gb|EFB90039.1| methionine--tRNA ligase [Pyramidobacter piscolens W5455]
Length = 651
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 49/326 (15%), Positives = 93/326 (28%), Gaps = 59/326 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY-----------GEKCV----------------T 67
V D HIG+A I D + R R + V
Sbjct: 15 VNDVPHIGHAYTTIAADAMARYKRMDGCDVFFLTGTDEHGQKVSESAAKKGMTPQQLTDE 74
Query: 68 YVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
+N D+ +I+ + + + ++ + + +
Sbjct: 75 LAQNFRDLL-PLIDASNDDFIRTTEARHVKVVQQIFKKLLDQGDIYKGTYKGWYCVPCET 133
Query: 128 HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
++P+ + H + + + S +++ R ++ + + + N
Sbjct: 134 YVPEASQGENHTCPDCH---RPLKEMEEESYFLRTSAYADRLLEFYEAHPDAIKPKVRYN 190
Query: 188 PADFILWKRSTPMEPGWES-PWGRGRPG---------------WHIECSAMSSHYLGK-- 229
L S PWG PG + C S K
Sbjct: 191 EVVSFLRMGMKDQSISRTSVPWGIPVPGDEKHTVYVWFDALINYLTACGYGSDEAKMKKF 250
Query: 230 -VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
H G D+I H A + A ++ H + +G KMSKS GN +
Sbjct: 251 WPVVNHLVGKDIIRFHC-IVWPIMLLALGLTPPACVYSHG-WWTRDGEKMSKSKGNVVDP 308
Query: 289 NELLETKKFGGRSWPAPVIRLAMLMT 314
+E++ + + V R +L
Sbjct: 309 HEMVGL-------YGSDVFRYFLLRQ 327
>gi|222152165|ref|YP_002561325.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
gi|222121294|dbj|BAH18629.1| methionyl-tRNA synthetase [Macrococcus caseolyticus JCSC5402]
Length = 654
Score = 40.8 bits (94), Expect = 0.47, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI E+A+ S
Sbjct: 20 HIGHAYSTVAGDAIARYKRMQGYD--VKY---LTGTDEHGQKIQEKAQAAGKSEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ +L H + + + ++ G Y + E +
Sbjct: 70 -EYLDEIIADIQALWKKLDISNDDFIRTTEDRHKVVVEKIFERLLEQGDIYLGDYEGWYS 128
Query: 156 TSSIPNYGS 164
Y
Sbjct: 129 VPDETFYTE 137
>gi|71034183|ref|XP_766733.1| methionyl-tRNA synthetase [Theileria parva strain Muguga]
gi|68353690|gb|EAN34450.1| methionyl-tRNA synthetase, putative [Theileria parva]
Length = 563
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 13/29 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKC 65
H+G+A ++ DVL R L +
Sbjct: 84 GPPHLGHAYTLVSSDVLKRFLILSGHDCK 112
>gi|326519270|dbj|BAJ96634.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 594
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 42/147 (28%), Gaps = 26/147 (17%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R V YV TD RA +E
Sbjct: 23 PYVNNVPHLGNIIGCVLSADVFARYCRLRG--HNVLYVCG-TDEYGTA----TENRALEE 75
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S I K + H R + I +
Sbjct: 76 GCS------PLQICDKYHAIHKEVYEWFNI-NFDHFGRTST------PQQTEICQSIFSK 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQ 173
+N + + + Y +R + ++
Sbjct: 123 LLDNNWLSENTMQQLYCESCQRFLADR 149
>gi|288801014|ref|ZP_06406470.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
gi|288331948|gb|EFC70430.1| methionine--tRNA ligase [Prevotella sp. oral taxon 299 str. F0039]
Length = 681
Score = 40.8 bits (94), Expect = 0.48, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 42/163 (25%), Gaps = 26/163 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR E V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYIPADIYVRYLRLKGEE--VAFICGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + Q + R T+ H ++++ + E
Sbjct: 72 ----PQDVVDRYHQLIKDSFSDFGIS-FDIYSRTTSKIHQQTASDFFKHLLDNNKLQEGE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
E ++D + D
Sbjct: 127 TEQLYDEEVHQFLADRYITGECPHCHNEGAYGDQCESCGRDLS 169
>gi|145480273|ref|XP_001426159.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393232|emb|CAK58761.1| unnamed protein product [Paramecium tetraurelia]
Length = 842
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 46/321 (14%), Positives = 92/321 (28%), Gaps = 49/321 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP--- 91
V HIG+ MI D + + K V + TD + +
Sbjct: 403 VNAQPHIGHLYSMIYADAIAKY-------KSVKLLTG-TD----------EHGLKVYRSA 444
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
N I + QF + + HI ++ + +G + +
Sbjct: 445 KNQPIQQYCDSISNQFQQLANSFIKYDHFVRTTDPQHIMKVQKNWNLLQNNGFILKDTYK 504
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
+ + + ++E+ + + Y + + ++ +
Sbjct: 505 GYYCQVEESFVNHKTDQYLEEENYFFKFDKDYLETCITKAP-SRYQNELKQLIINSICIS 563
Query: 212 RPG----WHIECSAMSSHYL-------------GKVFDIHGGGLDLIFPHHENEIAQSCC 254
RP W IE ++ + + +H G D++ H +
Sbjct: 564 RPKQRYYWGIEVPNDANQLIYVWLDALLGYLQEEQHHYMHVIGKDIVRFHALYWPSFLKG 623
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR-LAMLM 313
+ T I + KMSKS GN I +LL +++ IR +
Sbjct: 624 INNQSTTE--LIVHNHWIRNNMKMSKSLGNVIDPFQLL-------KTYNQNQIRLYFLTQ 674
Query: 314 THYREPIDFTVQRLTEAEILL 334
+ F Q+L +
Sbjct: 675 GPQNMDVSFEEQKLEKCWNTY 695
>gi|299137612|ref|ZP_07030793.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
gi|298600253|gb|EFI56410.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX8]
Length = 784
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 33/96 (34%), Gaps = 15/96 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV DVL R R+ + +T D+ KI A
Sbjct: 17 VNARPHIGHAYTTIVADVLAR--RHRLLGDDTFF---LTGTDEHGQKIERSAA------V 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
A + + QF R+ L R T+
Sbjct: 66 AGIAPQQFADQVSIQFRNLWDRMG-LTYDRYIRTTD 100
>gi|221211555|ref|ZP_03584534.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221168916|gb|EEE01384.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD1]
Length = 722
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---------HA 145
+ + + +D + Q+ I + A
Sbjct: 82 -PKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 187
>gi|218295699|ref|ZP_03496495.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
gi|218243858|gb|EED10385.1| arginyl-tRNA synthetase [Thermus aquaticus Y51MC23]
Length = 592
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 20/131 (15%), Positives = 40/131 (30%), Gaps = 15/131 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-TYVRNITDIDDKIIERARQE-------HPSIP 91
H+G+ R +++ D L R+L Y E V Y IDD +A + +
Sbjct: 119 HVGHLRNIVLGDSLARILDYAGREVLVLNY------IDD-TGRQAAETLFALRHYGLTWD 171
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + +D + ++ + I+L A
Sbjct: 172 GKEKYDHFAGRAYVRLHQDPEYEKLQPAIEEVLHALEQGELREEVNRILLAQMATMHALA 231
Query: 152 IIFDTSSIPNY 162
+D +
Sbjct: 232 AHYDLLVWESD 242
>gi|33303709|gb|AAP22262.1| methionyl-tRNA synthetase [Bacillus cereus]
Length = 416
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 49
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 50 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 109
Query: 156 TSSIPNYGS 164
Y
Sbjct: 110 VQDETFYTE 118
>gi|77406524|ref|ZP_00783576.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
gi|77174863|gb|EAO77680.1| methionyl-tRNA synthetase [Streptococcus agalactiae H36B]
Length = 665
Score = 40.8 bits (94), Expect = 0.49, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 76 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGEYTGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 136 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 191
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 192 FIQPDGRMN 200
>gi|269962055|ref|ZP_06176409.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
gi|269833139|gb|EEZ87244.1| methionyl-tRNA synthetase [Vibrio harveyi 1DA3]
Length = 686
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N E L+ ++ + + Y + +
Sbjct: 247 KNKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSTTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L+ L E + +
Sbjct: 306 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLNHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422
Query: 428 --ADYI 431
AD I
Sbjct: 423 AAADRI 428
>gi|254229863|ref|ZP_04923268.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262393754|ref|YP_003285608.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
gi|151937632|gb|EDN56485.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
gi|262337348|gb|ACY51143.1| methionyl-tRNA synthetase [Vibrio sp. Ex25]
Length = 691
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + ++ ++ I + +G
Sbjct: 77 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFISSRTIS 131
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 132 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMK 191
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 192 DSEHFFFDLPQFESMLKEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 251
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L+ ++ + A + Y + +
Sbjct: 252 KNKFFYVWLDAPIGYMGSFKNLCGKRDDLDFDEYWKKDSSAELYHFIGKDIVYFHSLFW- 310
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 311 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAK 367
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 368 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSDNFAEPELYNEFV 427
Query: 428 --ADYI 431
AD I
Sbjct: 428 AAADRI 433
>gi|154302149|ref|XP_001551485.1| hypothetical protein BC1G_09755 [Botryotinia fuckeliana B05.10]
gi|150855529|gb|EDN30721.1| hypothetical protein BC1G_09755 [Botryotinia fuckeliana B05.10]
Length = 1230
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 27/122 (22%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
R + + QR+ E E T + + D T I+ L LA
Sbjct: 697 RRQLRNSEQRVAELERQFVNEKDLKTLNKKLIEKRKTVSVLDSQTELMIRQLEVLAGYVE 756
Query: 377 KNHDLLPIFNAS----AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + + + I + L +++S AIE+L +ER LL+ K + AD R
Sbjct: 757 RAKGSKQPLDIAELEDSAIKEFVQKLDRLKQSMSSAIEQLFEERDELLEEKNQAIAD--R 814
Query: 433 KQ 434
+
Sbjct: 815 DR 816
>gi|33303705|gb|AAP22260.1| methionyl-tRNA synthetase [Bacillus cereus]
Length = 411
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 49
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 50 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 109
Query: 156 TSSIPNYGS 164
Y
Sbjct: 110 VQDETFYTE 118
>gi|319791139|ref|YP_004152779.1| leucyL-tRNA synthetase [Variovorax paradoxus EPS]
gi|315593602|gb|ADU34668.1| leucyl-tRNA synthetase [Variovorax paradoxus EPS]
Length = 876
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 54/200 (27%), Gaps = 24/200 (12%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
Y C Y H+G+ R + D+L R LR V D A
Sbjct: 36 YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGY--NVLMPMG---WD------AFGL 84
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ + T +N + + AT + +L ++
Sbjct: 85 PAENAALKNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKML 144
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWK 195
G AY + +D + + G V + L +
Sbjct: 145 EKGVAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVERREIPGYYLKISDYAEELLE 204
Query: 196 RSTPMEPGWESPWGRGRPGW 215
+ PGW + W
Sbjct: 205 HTQHKLPGWPERVKLMQENW 224
>gi|221199339|ref|ZP_03572383.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221205759|ref|ZP_03578774.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221174597|gb|EEE07029.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221180624|gb|EEE13027.1| methionyl-tRNA synthetase [Burkholderia multivorans CGD2M]
Length = 719
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 25 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---------HA 145
+ + + +D + Q+ I + A
Sbjct: 74 -PKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 133 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 179
>gi|161524036|ref|YP_001579048.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189351203|ref|YP_001946831.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|226710899|sp|A9AHJ8|SYM_BURM1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|160341465|gb|ABX14551.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189335225|dbj|BAG44295.1| methionyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
Length = 722
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---------HA 145
+ + + +D + Q+ I + A
Sbjct: 82 -PKQLIERVWAEHKRDFDSFGVSFDNFYSTDSEENRQLSEKIYLALKDNGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 187
>gi|77408311|ref|ZP_00785053.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
gi|77173074|gb|EAO76201.1| methionyl-tRNA synthetase [Streptococcus agalactiae COH1]
Length = 665
Score = 40.8 bits (94), Expect = 0.50, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 76 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLDEYTGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 136 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 191
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 192 FIQPDGRMN 200
>gi|237740543|ref|ZP_04571024.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|229422560|gb|EEO37607.1| methionyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
Length = 637
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 33/255 (12%), Positives = 67/255 (26%), Gaps = 25/255 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + +V T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKSMGMDTH--FV---TGLDEHGQKVEQAAEQHGFT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + +++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALNIKYDDFIRTTEERHKKAVKKILEIVHEKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKELTVLKEESYFFKMSKYADALLKHIDEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
P R ++ ++S + I + + + A
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIEFAPGHITYVWFDALTNYITSAGFEND 242
Query: 261 TANIWIHNGFLNLEG 275
+
Sbjct: 243 DKKFDKFWNDARVVH 257
>gi|15921721|ref|NP_377390.1| methionyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|25009384|sp|Q971C1|SYM_SULTO RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|15622508|dbj|BAB66499.1| 571aa long hypothetical methionyl-tRNA synthetase [Sulfolobus
tokodaii str. 7]
Length = 571
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 30/199 (15%), Positives = 60/199 (30%), Gaps = 14/199 (7%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
P V H+GN ++ DV R R YG++ V +V D+ I A++
Sbjct: 10 PYVNAVPHLGNLIGSVLSADVFARYARLKYGQENVVFVSG---SDEHGTPIEVEAKKR-- 64
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N +T + + K + ++ + R + I + + L +
Sbjct: 65 ----NVNPKELTDQAHEYDKKLFLDVWEISYNNYTRTESEIHKTFVRDFMLKLEKYIKIE 120
Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+EI + I F + ++ + +P
Sbjct: 121 EDEIPYCEYDKIYLPDRFVKGTCPYCGFEDARGDQCDNCGRLLTPRLLVNPKCVLCGRTP 180
Query: 208 WGRGRPGWHIECSAMSSHY 226
+ W + SA +
Sbjct: 181 VFKKTKHWFFDLSAFNDKI 199
>gi|290447949|emb|CBK19452.1| C. elegans protein F58B3.5b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 676
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 21/233 (9%), Positives = 53/233 (22%), Gaps = 12/233 (5%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V + H+GN ++ DV R + YV TD E ++
Sbjct: 44 PYVNNVPHLGNIIGCVLSADVFARYCNLRGHQT--FYVGG-TD-----EYGTATETKALQ 95
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANN 150
+ K T+H ++ + + +G+ +
Sbjct: 96 EGCTPRELCDKYHAIHKGIYEWFGIDFSHFGRTTTDHQTEICQDMFLKLHKNGYTSSQSV 155
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWG 209
+ ++ + + +P
Sbjct: 156 DQLYCNQCEKFLADRFVTGTCPMCAYDDARGDQCDGCGKLINAVDLKDAKCHMCKATPEV 215
Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+ + + + D D + + I ++ ++
Sbjct: 216 KQSTHIFLSLDKLQQK-TTEHLDRELAKEDNRWSSNAVGITKAWMKLGLDPRC 267
>gi|240281239|gb|EER44742.1| methionine-tRNA synthetase [Ajellomyces capsulatus H143]
Length = 325
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 26/139 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI------DD---KIIERARQ 85
V H+G+ MI+ DVL R TD D+ KI + A
Sbjct: 65 VNAAPHVGHLYTMILADVLKRWQILLGN----------TDAKLLTGTDEHGLKIQQAAAA 114
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + +N + F + + H + Y + G+
Sbjct: 115 ------LGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGY 168
Query: 145 AYEANNEIIFDTSSIPNYG 163
Y + +E + S Y
Sbjct: 169 IYTSKHEGWYSVSDEAFYP 187
>gi|126465030|ref|YP_001040139.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
gi|189083155|sp|A3DKS1|SYL_STAMF RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|126013853|gb|ABN69231.1| leucyl-tRNA synthetase [Staphylothermus marinus F1]
Length = 969
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 23/56 (41%), Gaps = 9/56 (16%)
Query: 14 KITEFQA-IDPSNIRMYVCGPTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGE 63
+ F+ I+P + Y TV Y + HIG+ R + D++ R R
Sbjct: 23 EKKIFEPRIEPDKPK-YF--ITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRGYN 75
>gi|323525136|ref|YP_004227289.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
gi|323382138|gb|ADX54229.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1001]
Length = 718
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPVMLRAEKEGVT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + ++ + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPY 186
>gi|257053975|ref|YP_003131808.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
gi|256692738|gb|ACV13075.1| methionyl-tRNA synthetase [Halorhabdus utahensis DSM 12940]
Length = 697
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 15/47 (31%), Positives = 20/47 (42%), Gaps = 6/47 (12%)
Query: 17 EFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
EF +P+ + CG Y HIG+ R + DVL R L
Sbjct: 5 EFPTENPAVV---TCGL-PYANGDLHIGHLRTYVGGDVLTRSLEKLG 47
>gi|77411392|ref|ZP_00787739.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
gi|77162565|gb|EAO73529.1| methionyl-tRNA synthetase [Streptococcus agalactiae CJB111]
Length = 665
Score = 40.8 bits (94), Expect = 0.51, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 76 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGEYTGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 136 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 191
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 192 FIQPDGRMN 200
>gi|328869736|gb|EGG18113.1| hypothetical protein DFA_06780 [Dictyostelium fasciculatum]
Length = 1545
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 20/176 (11%), Positives = 48/176 (27%), Gaps = 36/176 (20%)
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAV 351
L + + + + I + + + + + +
Sbjct: 571 LNNARDKLKLYDSREIEFQEKIETLTNQLKDASSAQEQLDQQSKRIKDLEKEIEAMTAKE 630
Query: 352 LSALYN-DLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
+ + D ++ + L + +N + K+ + IE
Sbjct: 631 IESRNAIDKMENDYLEKVRDLESKLNQNEK--------------DGEKDQGDDEKDQEIE 676
Query: 411 KLVQERLILLKM-----KKFSSADYI--------------RKQLESKGFILEDYKN 447
KL ++ I K K + D I R +L+ K L+D ++
Sbjct: 677 KLKEQLEIQKKESSRITKDYE--DKIIELERDLGETLSQERDKLKQKDVELKDMED 730
>gi|312136830|ref|YP_004004167.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
gi|311224549|gb|ADP77405.1| methionyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
Length = 550
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 25/165 (15%), Positives = 47/165 (28%), Gaps = 14/165 (8%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
H+G+ R I D+ R R + V +V TD + I +A +E
Sbjct: 17 HLGHLRSTYIPADIYSRYQRMVGND--VLFVCA-TD-EHGTPIAVKAEKEGKD------P 66
Query: 97 SIITSKNTQQFVKD-TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
IT+K ++ D + + H + G+ YE + +
Sbjct: 67 LEITTKYYKKIKSDLDKCDISFDNFSRTSSDIHYKVAQNFFLKLYKKGYIYEKEIKQFYC 126
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
T+ I + + + + P
Sbjct: 127 TNCKRFLPDRYVEGICPYCDSEGARGDHCEVCGRHLEVLELIKPR 171
>gi|86357775|ref|YP_469667.1| methionyl-tRNA synthetase [Rhizobium etli CFN 42]
gi|86281877|gb|ABC90940.1| methionyl-tRNA synthetase protein [Rhizobium etli CFN 42]
Length = 516
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E A
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--RDVFF---LTGTDEHGQKMQQTARAEGI------A 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L H + + +G Y+ + +
Sbjct: 69 PQALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMADNGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|228995127|ref|ZP_04154865.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
gi|228764615|gb|EEM13426.1| YqeB (Ribosomal protein L29) [Bacillus pseudomycoides DSM 12442]
Length = 231
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 17/61 (27%), Positives = 24/61 (39%), Gaps = 5/61 (8%)
Query: 392 LGIEVCKEHLN-KNISIAIEKLVQERLILLKMKKFSSADY--IRKQLESKGFILEDYKNP 448
G E + L + I L+ R LK K AD +R+ L G ++ D KN
Sbjct: 161 FGSEYERWALGHTDFPEKINVLLYARDRALKEK--KKADAKYLREDLAQLGAVIRDEKNG 218
Query: 449 D 449
Sbjct: 219 Q 219
>gi|225463876|ref|XP_002268996.1| PREDICTED: hypothetical protein [Vitis vinifera]
gi|296081059|emb|CBI18340.3| unnamed protein product [Vitis vinifera]
Length = 804
Score = 40.8 bits (94), Expect = 0.52, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 58/216 (26%), Gaps = 23/216 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R V Y+ TD + E
Sbjct: 28 PYVNNVPHLGNIIGCVLSADVFARYCRLRGY--NVLYICG-TD----------EYGTATE 74
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGH- 144
++ N + I K + + +T H + + ++ +
Sbjct: 75 TKAMEENCSPQQICDKYHKIHKEVYDWFGISFDEFGRTSTPQHTEVCQAIFKKLMENNWL 134
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKID--EQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ ++ +T + + ++ K + +
Sbjct: 135 SENRMQQLYCETCQRFLADRLVEGTCPTLDCNYDSARGDQCEKCGKLLNPTELKDPRCKV 194
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
SP R +E + + ++ G
Sbjct: 195 CQSSPQIRDTDHLFLELPLLKDKLEEYINNMSIAGC 230
>gi|325092268|gb|EGC45578.1| methionine-tRNA synthetase [Ajellomyces capsulatus H88]
Length = 586
Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 24/139 (17%), Positives = 41/139 (29%), Gaps = 26/139 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI------DD---KIIERARQ 85
V H+G+ MI+ DVL R TD D+ KI + A
Sbjct: 65 VNAAPHVGHLYTMILADVLKRWQILLGN----------TDAKLLTGTDEHGLKIQQAAAA 114
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGH 144
+ + +N + F + + H + Y + G+
Sbjct: 115 ------LGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEAVRYFWDMLNHRGY 168
Query: 145 AYEANNEIIFDTSSIPNYG 163
Y + +E + S Y
Sbjct: 169 IYTSKHEGWYSVSDEAFYP 187
>gi|228989246|ref|ZP_04149239.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228770456|gb|EEM19027.1| Methionyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 660
Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGYD--VHY---LTGTDEHGQKIQKKAEE------LQVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|219684440|ref|ZP_03539384.1| lysyl-tRNA synthetase [Borrelia garinii PBr]
gi|219672429|gb|EED29482.1| lysyl-tRNA synthetase [Borrelia garinii PBr]
Length = 521
Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 41/354 (11%), Positives = 88/354 (24%), Gaps = 53/354 (14%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR---NITDIDDKIIERARQEHP 88
G T HIGN R +I D++ R L+ + V ++ N D+
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSGSQ--VRFIYSWDNY-DV-----------FR 74
Query: 89 SIPINDAISIITSKN----------TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQN 138
+P N + T+ R + P+ I +
Sbjct: 75 KVPQNMPEQELLKTYLRQAITRVPDTRGHKTSYARANEIEFEKYLPIVGINPEFIDQSKK 134
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPE----------KYHKKNP 188
+A + + + K++E + + +
Sbjct: 135 YTNSSYASQIKFALNHKKELAEALNEYRTSKLEENWYPISIFCTKCNRDTTTVNNYDNHY 194
Query: 189 ADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENE 248
+ + + W P + + D G D +
Sbjct: 195 SVEYSCECGNQESLDIRTTWAIKLPWR----IDWPMRWKYEKVDFEPAGKDHHSSGGSFD 250
Query: 249 IAQSCC-ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVI 307
+++ + + G K+S S+G+ I++ ++LE + V
Sbjct: 251 TSKNIVKIFQGSPPVTFQYDFISIKGRGGKISSSSGDVISLKDVLEI-------YTPEVT 303
Query: 308 RLAMLMTHYREPIDFTVQ----RLTEAEILLSKWPQTSTSKGIIDPAVLSALYN 357
R T + ++ E + +Y
Sbjct: 304 RFLFAATKPNTEFSISFDLDVIKIYEDYDRFERIYYGVEDIKEEKKRSFKRIYE 357
>gi|297243031|ref|ZP_06926969.1| valyl-tRNA synthetase [Gardnerella vaginalis AMD]
gi|296889242|gb|EFH27976.1| valyl-tRNA synthetase [Gardnerella vaginalis AMD]
Length = 921
Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ DV+ R R + V Y
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARYKRMQGFD--VFY 92
>gi|283782702|ref|YP_003373456.1| valine--tRNA ligase [Gardnerella vaginalis 409-05]
gi|283442071|gb|ADB14537.1| valine--tRNA ligase [Gardnerella vaginalis 409-05]
Length = 925
Score = 40.5 bits (93), Expect = 0.53, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ DV+ R R + V Y
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARYKRMQGFD--VFY 92
>gi|255074981|ref|XP_002501165.1| predicted protein [Micromonas sp. RCC299]
gi|226516428|gb|ACO62423.1| predicted protein [Micromonas sp. RCC299]
Length = 3044
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 13/72 (18%), Positives = 24/72 (33%), Gaps = 11/72 (15%)
Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIAI----EKLVQERLILLKMKKFSSADYI- 431
K+ + + A A LG E ++ + EK R K + AD +
Sbjct: 886 KSERIRELRAAVADALGTRADDEDTVAKLNEELLAIGEKYAAAREEAKANKD-ALADAVK 944
Query: 432 R-----KQLESK 438
R ++ +
Sbjct: 945 RVESLEDEIAAA 956
>gi|154337126|ref|XP_001564796.1| methionyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134061834|emb|CAM38870.1| putative methionyl-tRNA synthetase [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 752
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ DVL R R E +V T D+ K+ E A ++ S
Sbjct: 221 VNASPHIGHVYSTLIVDVLGRYHRVKGEEV---FVM--TGTDEHGQKVAEAAAKQGVST- 274
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T+ + +F + + H + + + + G Y
Sbjct: 275 -----MDFTTSVSNEFKQCFKEMNYDMNYFIRTTNPMHEKLVGDIWKKLEAKGDIYLGKY 329
Query: 151 EIIFDTSSIPNYGSFSRRKIDE 172
E + S + + +
Sbjct: 330 EGWYSVSDESFLTAQNVADSVD 351
>gi|298253129|ref|ZP_06976921.1| valyl-tRNA synthetase [Gardnerella vaginalis 5-1]
gi|297532524|gb|EFH71410.1| valyl-tRNA synthetase [Gardnerella vaginalis 5-1]
Length = 925
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ DV+ R R + V Y
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARYKRMQGFD--VFY 92
>gi|308235658|ref|ZP_07666395.1| valyl-tRNA synthetase [Gardnerella vaginalis ATCC 14018]
gi|311115203|ref|YP_003986424.1| valine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
gi|310946697|gb|ADP39401.1| valine--tRNA ligase [Gardnerella vaginalis ATCC 14019]
Length = 922
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ DV+ R R + V Y
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARYKRMQGFD--VFY 92
>gi|33303699|gb|AAP22257.1| methionyl-tRNA synthetase [Bacillus cereus]
Length = 416
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 49
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 50 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 109
Query: 156 TSSIPNYGS 164
Y
Sbjct: 110 VQDETFYTE 118
>gi|22537699|ref|NP_688550.1| methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|25011651|ref|NP_736046.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|76788328|ref|YP_330181.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77413421|ref|ZP_00789613.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
gi|22534588|gb|AAN00423.1|AE014263_2 methionyl-tRNA synthetase [Streptococcus agalactiae 2603V/R]
gi|24413191|emb|CAD47270.1| methionyl-tRNA synthetase [Streptococcus agalactiae NEM316]
gi|76563385|gb|ABA45969.1| methionyl-tRNA synthetase [Streptococcus agalactiae A909]
gi|77160515|gb|EAO71634.1| methionyl-tRNA synthetase [Streptococcus agalactiae 515]
Length = 665
Score = 40.5 bits (93), Expect = 0.54, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 76 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGEYTGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 136 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 191
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 192 FIQPDGRMN 200
>gi|325295274|ref|YP_004281788.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
gi|325065722|gb|ADY73729.1| Arginyl-tRNA synthetase [Desulfurobacterium thermolithotrophum DSM
11699]
Length = 546
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 18/32 (56%), Gaps = 2/32 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
PT H+G+ R +V DVLYR++R +
Sbjct: 126 PT--GPLHVGHGRGAVVGDVLYRVMRLTGYKP 155
>gi|325969075|ref|YP_004245267.1| leucyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323708278|gb|ADY01765.1| leucyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 998
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
P V HIG++R + D++ R R
Sbjct: 39 PYVSGSPHIGHSRTYTIGDIIARYKRARGFN 69
>gi|313895444|ref|ZP_07829001.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
gi|312976339|gb|EFR41797.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 137 str. F0430]
Length = 514
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 62/263 (23%), Gaps = 28/263 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A V D + R R + V + +T D+ KI + A +E +
Sbjct: 21 HIGHAYCTTVADTIARFKRLAGYD--VFF---LTGSDEHGQKIQQAAEKEGVT------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ F + L + +H Q +
Sbjct: 70 QAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIYKGEYKGLYC 129
Query: 155 DTSSIP----NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + E Y + P + P R
Sbjct: 130 TPCESYWTELQLDENGNCPDCHRPVQEVSEEAYFFRMSKYADRVLAYIKEHPDFIQPVSR 189
Query: 211 -----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+E +S + +++ A + I +
Sbjct: 190 RNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYV---WFDALTNYLTPIGYMHDKE 246
Query: 266 IHNGFLNLEGRKMSKSNGNFITI 288
+ + + + K F TI
Sbjct: 247 TFHKYWPCDVHLVGKEIVRFHTI 269
>gi|254302880|ref|ZP_04970238.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148323072|gb|EDK88322.1| methionine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 636
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 51/403 (12%), Positives = 104/403 (25%), Gaps = 46/403 (11%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + T+ T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---THFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALEIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGW 204
+ + + K L K P +
Sbjct: 123 EGKYCVSCETFFPENQLNGSNKCPDCGKELTILKEESYFFKMSKYADALLKHIEE-HPDF 181
Query: 205 ESPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---D 256
P R ++ ++S + I + + + A +
Sbjct: 182 ILPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEN 241
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKK-FGGRSWPAPVIRLAMLMTH 315
EK W + ++L G+ + + + L K M+
Sbjct: 242 NDEKFNKFWNNARVVHLIGKDIIRFHAIIWPCMLLSAGIKLPDSIVAHGWWTSEGEKMSK 301
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALH-KLARE 374
R + + + + ++ + D +T I L+ LA +
Sbjct: 302 SRGNVVNPYDEIKKYGVDAFRYYLLREAN--------FGTDGDYSTKGIIGRLNSDLAND 353
Query: 375 STK--NHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQE 415
N L ++ ++ I I+ + E
Sbjct: 354 LGNLLNRTLGMYKKYFNDVI----VSSSASEAIDEEIKSMFNE 392
>gi|15806450|ref|NP_295156.1| methionyl-tRNA synthetase [Deinococcus radiodurans R1]
gi|25009407|sp|Q9RUF3|SYM_DEIRA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|6459194|gb|AAF11005.1|AE001988_1 methionyl-tRNA synthetase [Deinococcus radiodurans R1]
Length = 681
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 23/147 (15%), Positives = 50/147 (34%), Gaps = 10/147 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQEHPSIPINDAI 96
HIG+ I+ D + R R + VT+V TD + +KI + A + + + +
Sbjct: 33 PHIGHVYEKILADAIARYQRLAG--RDVTFVMG-TD-EHGEKISKAAAKGGVTPQ--ELV 86
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
++ + Q K + + H + ++Q + G Y A E ++
Sbjct: 87 DDLSERAFQGLWK--KLGISYDFFIRTTSAKHKKYVQDVLQRVYDAGDIYFAEYEGLYSV 144
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ + + +
Sbjct: 145 GAERYVTEKELVEGPDGVRRFPGDKDP 171
>gi|33303707|gb|AAP22261.1| methionyl-tRNA synthetase [Bacillus cereus]
Length = 418
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 1 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 49
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 50 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 109
Query: 156 TSSIPNYGS 164
Y
Sbjct: 110 VQDETFYTE 118
>gi|72119932|gb|AAZ62195.1| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
Length = 888
Score = 40.5 bits (93), Expect = 0.55, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 55 KFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGN--NVLMPMG---WD---AFGMP 106
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ A + T N K + + AT + +L ++
Sbjct: 107 AENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLE 166
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G AY + +D + + G V ++
Sbjct: 167 KGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAIVEKREIPMYY 213
>gi|301755812|ref|XP_002913732.1| PREDICTED: ATP-binding cassette sub-family A member 12-like
[Ailuropoda melanoleuca]
Length = 2593
Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 19/156 (12%), Positives = 32/156 (20%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F L
Sbjct: 1702 NFTDRDDKILTRGERLGGFDLLLKKIMAIL---IKRFHHTRRNWKGLIAQVILPIVFVTT 1758
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + S
Sbjct: 1759 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANSHPSTQGLVSAMWNFPGIDNMCLNV 1818
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
W + CS
Sbjct: 1819 SDPRCLKEDSLGKWSTSGEPVTNFGVCSCSENIQEC 1854
>gi|323126698|gb|ADX23995.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 665
Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A + S
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGYE--VFY---LTGLDEHGQKIQTKAAEAGIS 66
>gi|225571222|ref|ZP_03780220.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
15053]
gi|225160053|gb|EEG72672.1| hypothetical protein CLOHYLEM_07311 [Clostridium hylemonae DSM
15053]
Length = 630
Score = 40.5 bits (93), Expect = 0.56, Method: Composition-based stats.
Identities = 53/416 (12%), Positives = 102/416 (24%), Gaps = 81/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 19 PHIGNTYEIVLADAIARYKRSRGYD--VFFQ---TGTDEHGQKIELKAEEAGVTPKEFVD 73
Query: 96 --------ISII-----------TSKNTQQFVKDTTRLACLAPTHQPR------------ 124
I + T ++ V+ +
Sbjct: 74 GVAGEIRRIWDLMNTSYDKFIRTTDGYHEKQVQKIFKKLYDQGDIYKGHYEGMYCTPCES 133
Query: 125 --------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ + +A + I I +
Sbjct: 134 FFTESQLVDGKCPDCGREVQPAKEEAYFFKMSKYADRLIDHINSHPEFIQPVSRKNEMMN 193
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ G + + + W G +C ++ K
Sbjct: 194 NFLLPGLQDLCVSRTSFKWGIPVDFDPEHVVYVWLDALTNYITGIGYDCGGDNTEQFRKD 253
Query: 231 FD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ +H G D+I H D + +L KMSKS GN +
Sbjct: 254 WPADLHLIGKDIIRFHTIYWPIFLMALD--LPLPKQIFGHPWLLQGDGKMSKSKGNVLYA 311
Query: 289 NELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
+EL++ + VI +++ + T+ L I ++
Sbjct: 312 DELVDFFGVDAVRYFVLHEMPFENDGVISWELMVERMNSDLANTLGNLVNRTISMTNKYF 371
Query: 340 TSTSKG---------------IIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
T P + ++L AI + L + K D
Sbjct: 372 GGTVTDKGVAGEADADLKAMTESAPKAVEGKMDELRVADAITEIFNLFKRCNKYID 427
>gi|325967829|ref|YP_004244021.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
gi|323707032|gb|ADY00519.1| methionyl-tRNA synthetase [Vulcanisaeta moutnovskia 768-28]
Length = 584
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 38/163 (23%), Gaps = 20/163 (12%)
Query: 36 YDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP--- 91
Y H+GN ++ DV R LR V +V + + I
Sbjct: 27 YAVPHLGNLIGSVLSADVFVRYLRLKG--DDVVFVSG-----------SDEHGTPIEVEA 73
Query: 92 --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA 148
+ +T + + K + + H + + + + +
Sbjct: 74 LQLGIRPRELTDRMHEIIKKLFEFWEIGFDNYTRTESPVHREFVREFFMKLYNNSYIFTK 133
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+E+ + + +
Sbjct: 134 EDEVPYCPKDKIYLPDRFIIGTCPYCGYDKARGDQCENCGRLL 176
>gi|298675673|ref|YP_003727423.1| lysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
gi|298288661|gb|ADI74627.1| lysyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
Length = 530
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 44/311 (14%), Positives = 87/311 (27%), Gaps = 33/311 (10%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI------IERARQ 85
G T HIGN R ++ D +YR L + Y I D D + + +
Sbjct: 27 GITPSGHIHIGNMREVVTADAVYRALLDKDQNAELIY---IADTYDPLRKVYPFLPDSYS 83
Query: 86 EHPSIPIND------AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
EH P+++ F++ +++ ++
Sbjct: 84 EHIGKPLSEIPCPCGNCENYAQHFLTPFLESLSKMGIHPK------VYKGDELYKSGAYT 137
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG---TRVPEKYHKKNPADFILWKR 196
A ++I K + + +
Sbjct: 138 DAIKTALLNRDKISRIIEEETGKDPDPEWSPFNPICNVCGRINTTKVVDYDIENETVDFV 197
Query: 197 STPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
+ G S G G+ W ++ LG + G ++ +
Sbjct: 198 CSNGHSGTVSMTGGGKLSWRVDWP-ARWQILGVTVEPFGKDHASRGGSYDTGERIAKEIY 256
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
E + + + MS S+G +TI+++L + P V+R ++ T
Sbjct: 257 GYEPPYPVVYEW-IMLGKQGAMSSSSGVVVTISDML-------KVVPPEVLRYLIIKTKP 308
Query: 317 REPIDFTVQRL 327
+ I F
Sbjct: 309 EKHISFEPGMP 319
>gi|228950587|ref|ZP_04112722.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
gi|228809062|gb|EEM55546.1| Methionyl-tRNA synthetase [Bacillus thuringiensis serovar kurstaki
str. T03a001]
Length = 660
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKGLWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|113869093|ref|YP_727582.1| leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
[Ralstonia eutropha H16]
gi|113527869|emb|CAJ94214.1| Leucyl-tRNA synthetase fused to ISAE1 Orf2 fusion protein
[Ralstonia eutropha H16]
Length = 1343
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 510 KFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGN--NVLMPMG---WD---AFGMP 561
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ A + T N K + + AT + +L ++
Sbjct: 562 AENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLE 621
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G AY + +D + + G V ++
Sbjct: 622 KGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 668
>gi|124265411|ref|YP_001019415.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
gi|189030288|sp|A2SC91|SYL_METPP RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|124258186|gb|ABM93180.1| leucyl-tRNA synthetase [Methylibium petroleiphilum PM1]
Length = 897
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 10/39 (25%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
+ Y C Y H+G+ R + D++ R LR
Sbjct: 41 KFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKGYN 79
>gi|219685712|ref|ZP_03540525.1| lysine--tRNA ligase [Borrelia garinii Far04]
gi|219672762|gb|EED29788.1| lysine--tRNA ligase [Borrelia garinii Far04]
Length = 521
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ + V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSGSQ--VRFI 64
>gi|194017985|ref|ZP_03056592.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
gi|194010322|gb|EDW19897.1| methionyl-tRNA synthetase [Bacillus pumilus ATCC 7061]
Length = 666
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 21/129 (16%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI ++A ++ N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLQGYD-----VMYLTGTDEHGQKIQQKAEEQ------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+L H + + Q ++ G Y E +
Sbjct: 71 IEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTKIIEQVFQKLLDQGDIYLDQYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 IPDETFYTE 139
>gi|75674290|ref|YP_316711.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
gi|123773340|sp|Q3SWI2|SYL_NITWN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|74419160|gb|ABA03359.1| leucyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
Length = 883
Score = 40.5 bits (93), Expect = 0.57, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DV+ R +R
Sbjct: 47 GRIHIGHVRNYTLGDVIARYMRARGYN 73
>gi|88607168|ref|YP_505281.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
gi|109894971|sp|Q2GK20|SYR_ANAPZ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|88598231|gb|ABD43701.1| arginyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
Length = 580
Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR + DVL LL++ +
Sbjct: 139 PT--GPLHIGHARGAVFGDVLSNLLKWVGYD 167
>gi|268679054|ref|YP_003303485.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
gi|268617085|gb|ACZ11450.1| arginyl-tRNA synthetase [Sulfurospirillum deleyianum DSM 6946]
Length = 528
Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR ++ D L R+ ++ + Y N
Sbjct: 114 PT--GPLHIGHARGAVIGDALARIGKHLGYQITTEYYVN 150
>gi|315230637|ref|YP_004071073.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315183665|gb|ADT83850.1| arginyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 647
Score = 40.5 bits (93), Expect = 0.58, Method: Composition-based stats.
Identities = 18/92 (19%), Positives = 38/92 (41%), Gaps = 5/92 (5%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+AR I+ D + R++R V +N IDD I+ A+ + + + I
Sbjct: 141 HMGHARNSILGDTMARVMRTLGYNVEV---QNY--IDDLGIQFAQVMWGYLNLKEEFEKI 195
Query: 100 TSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
++ ++ +K+ + L +
Sbjct: 196 KAEIEERCIKENSIDHVLGLLYVEVHRKMEEN 227
>gi|168705003|ref|ZP_02737280.1| arginyl-tRNA synthetase [Gemmata obscuriglobus UQM 2246]
Length = 580
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
GP V H+G+ R I+ D L R+LR+
Sbjct: 126 GPNVAKPLHVGHLRSTIIGDALVRILRFLGH 156
>gi|330467703|ref|YP_004405446.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
gi|328810674|gb|AEB44846.1| arginyl-tRNA synthetase [Verrucosispora maris AB-18-032]
Length = 573
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 22/46 (47%), Gaps = 11/46 (23%)
Query: 34 TVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
TV D++ H+G+ R I+ D L R+L + G V RN
Sbjct: 113 TVVDYSQPNIAKEMHVGHLRSTIIGDALVRILEHLGG-TVVR--RN 155
>gi|227486182|ref|ZP_03916498.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
gi|227235813|gb|EEI85828.1| methionine--tRNA ligase [Anaerococcus lactolyticus ATCC 51172]
Length = 650
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 27/177 (15%), Positives = 52/177 (29%), Gaps = 17/177 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN I+ DVL R E + +T D+ KI+E A + +
Sbjct: 21 HIGNTYTSIIADVLKRYKTLLGYEAYL-----VTGTDEHGQKIMESAHAHGKEPQ--EFV 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I ++ + + K + H ++ + + G Y+ + + T
Sbjct: 74 DKIAAETIKLWEKLDINY---DTFIRSTGKQHEKDVVDIFNKLYEQGDIYKGEYKGYYCT 130
Query: 157 SSIPN----YGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + E Y + K P + P
Sbjct: 131 PCETFWTESQLEDGKCPDCGRDVNYQEEETYFFRLSKYADKLKELFKDHPEFLEPAF 187
>gi|219122104|ref|XP_002181393.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217407379|gb|EEC47316.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 639
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 10/58 (17%), Positives = 26/58 (44%), Gaps = 8/58 (13%)
Query: 407 IAIEKLVQERLILLKMKKFSSADYIRKQLES----KGF--ILEDYKNPDNGQRMTRWK 458
+ L++ R + F AD +R+++ + +++D+ + G ++WK
Sbjct: 68 EKMNLLIERRAAARWIGDFEVADALRREIATHKFPANIEVVIQDFPRTEGG--GSKWK 123
>gi|161611254|ref|YP_297039.2| leucyl-tRNA synthetase [Ralstonia eutropha JMP134]
gi|189083223|sp|Q46XD8|SYL_RALEJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
Length = 873
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 40 KFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGN--NVLMPMG---WD---AFGMP 91
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ A + T N K + + AT + +L ++
Sbjct: 92 AENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLE 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G AY + +D + + G V ++
Sbjct: 152 KGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAIVEKREIPMYY 198
>gi|116784100|gb|ABK23214.1| unknown [Picea sitchensis]
Length = 336
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 7/52 (13%), Positives = 26/52 (50%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
++ + ++ I++++ +R + + +AD ++K + +G+ + D
Sbjct: 158 VDTKNARESADVPISVQEATIQRREARARRDYVTADALKKDISKEGYRVFDG 209
>gi|13940612|gb|AAK50414.1|AC021891_15 Putative methionyl-tRNA synthetase [Oryza sativa Japonica Group]
Length = 596
Score = 40.5 bits (93), Expect = 0.59, Method: Composition-based stats.
Identities = 24/206 (11%), Positives = 52/206 (25%), Gaps = 26/206 (12%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ D R R V YV TD +A +E
Sbjct: 24 PYVNNVPHLGNIIGCVLSADAFARYCRLRG--HNVLYVCG-TDEYGTA----TETKAMEE 76
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY--LIQNIILHGH 144
S I K + ++ ++ ++ + +
Sbjct: 77 GCS------PREICDKYHAIHKEVYEWFDISFDIFGRTSSPQQTEVCQDIFLKLLDNNWL 130
Query: 145 AYEANNEIIFDTSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+ ++ ++ + EK K + ++ +
Sbjct: 131 SENTMQQLYCNSCQRFLADRLVEGYCPTEGCNYDSARGDQCEKCGKLLNSTELVNPKCKA 190
Query: 200 MEPGWESPWGRGRPGWHIECSAMSSH 225
+P R +E +
Sbjct: 191 CHVCGSTPCVRDTDHLFLELPLLREK 216
>gi|332298009|ref|YP_004439931.1| Methionyl-tRNA synthetase [Treponema brennaborense DSM 12168]
gi|332181112|gb|AEE16800.1| Methionyl-tRNA synthetase [Treponema brennaborense DSM 12168]
Length = 781
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 29/202 (14%), Positives = 52/202 (25%), Gaps = 22/202 (10%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEH 87
P V + H+GN ++ DV R R + YV TD RA +E
Sbjct: 11 PYVNNIPHLGNLIQVLSADVFARFCRSRGYDTL--YVCG-TDEYGTA----TETRALEEK 63
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ--MIYLIQNIILHGHA 145
+ + A H R + + + ++ +G
Sbjct: 64 KT------PRELCDYYHAIHADIYKWFGI-AFDHFGRTSAAQQTEIVQRMFLDLDKNGFI 116
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGW 204
E E +F R + + +S
Sbjct: 117 RENTIEQLFCPDCGRFLADRFVRGTCPHCGYEDARGDQCENCGKLLEPVELKSPRCSTCG 176
Query: 205 ESPWGRGRPGWHIECSAMSSHY 226
+P + +I+ A+ Y
Sbjct: 177 GTPHLKSTKHLYIDLPAIQKRY 198
>gi|309389593|gb|ADO77473.1| leucyl-tRNA synthetase [Halanaerobium praevalens DSM 2228]
Length = 831
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 35/160 (21%), Gaps = 19/160 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDA 95
H+G+ R + DV+ R R V + D A + N
Sbjct: 49 HMGHVRVYSIGDVIARYKRMKGY--NVLHPMG---WD------AFGLPAENAAIKHGNIH 97
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEI 152
T N + + T ++ + + AY+ + +
Sbjct: 98 PKEWTWDNIAHMKEQMKAMGLSYDWDHEVTTAAEDYYKWTQWFFTQMFNDDLAYKKESTV 157
Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ E+ +
Sbjct: 158 NWCPSCETVLANEQVVNDACERCGTEVDLRDLEQWFLKIT 197
>gi|187663990|sp|A7MZT3|SYM_VIBHB RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
Length = 686
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 48/426 (11%), Positives = 107/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + + ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGR 210
+FD + + + + P +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N E L+ ++ + + Y + +
Sbjct: 247 ENKFFYVWLDAPVGYMASFKNLCDKTEGLDFDEYWKKDSSTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
E + P G + + V A L L E + +
Sbjct: 306 ---PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLKHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFISKRFEGKLAENFAEPELYNEFV 422
Query: 428 --ADYI 431
AD I
Sbjct: 423 AAADRI 428
>gi|328477975|gb|EGF47892.1| methionyl-tRNA synthetase [Lactobacillus rhamnosus MTCC 5462]
Length = 47
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 11/24 (45%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIGNA I DVL R R +
Sbjct: 21 HIGNAYTTIAADVLARYKRLMGYD 44
>gi|319745565|gb|EFV97867.1| methionine--tRNA ligase [Streptococcus agalactiae ATCC 13813]
Length = 671
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 27 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 81
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 82 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGEYTGWYSVSDEEF 141
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 142 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 197
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 198 FIQPDGRMN 206
>gi|157690820|ref|YP_001485282.1| methionyl-tRNA synthetase [Bacillus pumilus SAFR-032]
gi|157679578|gb|ABV60722.1| methionine--tRNA ligase [Bacillus pumilus SAFR-032]
Length = 666
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 21/139 (15%), Positives = 40/139 (28%), Gaps = 15/139 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V +T D+ KI ++A ++ N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLQGYD-----VMYLTGTDEHGQKIQQKAEEQ------NITP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+L H + + Q ++ G Y E +
Sbjct: 71 IEYLDPVVADIQSLWKKLDISNDDFIRTTEKRHTIIIGQVFQKLLDQGDIYLDQYEGWYS 130
Query: 156 TSSIPNYGSFSRRKIDEQK 174
Y ++ +
Sbjct: 131 IPDETFYTETQLVDVEHNE 149
>gi|16304832|emb|CAC95161.1| class 1 lysyl-tRNA synthetase [Borrelia garinii]
Length = 521
Score = 40.5 bits (93), Expect = 0.60, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ + V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSGSQ--VRFI 64
>gi|328948204|ref|YP_004365541.1| methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
gi|328448528|gb|AEB14244.1| Methionyl-tRNA synthetase [Treponema succinifaciens DSM 2489]
Length = 775
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 45/161 (27%), Gaps = 11/161 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V + H+GN M+ DV R R E YV TD E ++
Sbjct: 17 PYVNNIPHLGNLIQMLSADVFARFCRSRGYETL--YVCG-TD-----EYGTATETRAVEE 68
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANN 150
+ +Q + A R +N + +++ +G E N
Sbjct: 69 KKTPRELCDYYYKQHDEIYKWFDI-AFDKFGRTSNEECTEITQAMFKDLDKNGFIKEHTN 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ +F S + + K +
Sbjct: 128 KQLFCPSCQMFLADRYVHGVCPKCGFEDARGDQCDKCGSLL 168
>gi|257470691|ref|ZP_05634781.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|317064897|ref|ZP_07929382.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
gi|313690573|gb|EFS27408.1| leucyl-tRNA synthetase [Fusobacterium ulcerans ATCC 49185]
Length = 869
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 26/219 (11%), Positives = 60/219 (27%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V + D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLHPMG---WDSFGLPAENAAIQNGA------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
++ T N + + L + ++ + + G Y+ +
Sbjct: 98 AVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D +++ K + + ++ + L + ++ GW
Sbjct: 158 WCPDCNTVLANEQVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGHKEIKDGWPEK 217
Query: 208 WGRGRPGW----HIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ W + + G+ + +D I+
Sbjct: 218 VLTMQKNWIGKSYGTEIVFTVEETGEKLPMFTTRIDTIY 256
>gi|210623269|ref|ZP_03293686.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
gi|210153670|gb|EEA84676.1| hypothetical protein CLOHIR_01636 [Clostridium hiranonis DSM 13275]
Length = 644
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 41/151 (27%), Gaps = 18/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPINDAI 96
HIG+ + D + R R+ + V + +T D +KI ++A++ +
Sbjct: 20 HIGHTYTTVAADAIARFKRFCGYD--VKF---LTGTDEHGEKIQKKAKEAGMTEI----- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQ----PRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+L PR T I ++ +
Sbjct: 70 -EYLDGMIADIKALWKKLDISYDDFIRTTEPRHTEIIQKIFTKLYEQGDIYKGTYEGRYC 128
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + T V ++
Sbjct: 129 TPCESFWTESQLIDGTKCPDCGRETYVAKEE 159
>gi|194290700|ref|YP_002006607.1| leucyl-tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
gi|193224535|emb|CAQ70546.1| leucine tRNA synthetase [Cupriavidus taiwanensis LMG 19424]
Length = 879
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 48/167 (28%), Gaps = 13/167 (7%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 46 KFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNGN--NVLMPMG---WD---AFGMP 97
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ A + T N K + + AT + +L ++
Sbjct: 98 AENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPDYYRWNQWLFLKMLE 157
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G AY + +D + + G V ++
Sbjct: 158 KGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 204
>gi|92115730|ref|YP_575459.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
gi|122990360|sp|Q1QRZ8|SYL_NITHX RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|91798624|gb|ABE60999.1| leucyl-tRNA synthetase [Nitrobacter hamburgensis X14]
Length = 878
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DV+ R +R
Sbjct: 47 GRIHIGHVRNYTLGDVIARYMRAKGYN 73
>gi|51598914|ref|YP_073102.1| lysyl-tRNA synthetase [Borrelia garinii PBi]
gi|55977753|sp|Q937U7|SYK_BORGA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|51573485|gb|AAU07510.1| lysyl-tRNA synthetase [Borrelia garinii PBi]
Length = 521
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 2/38 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R +I D++ R L+ + V ++
Sbjct: 29 GITPSGTVHIGNFREVISVDLVARALKDSGSQ--VRFI 64
>gi|218198281|gb|EEC80708.1| hypothetical protein OsI_23153 [Oryza sativa Indica Group]
Length = 804
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 28/216 (12%), Positives = 54/216 (25%), Gaps = 23/216 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R V Y+ TD +A +E
Sbjct: 28 PYVNNVPHLGNIIGCVLSADVFARYCRLRGY--NVIYICG-TDEYGTA----TETKAMEE 80
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
S I K + ++ ++ I + + +
Sbjct: 81 KCS------PKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWL 134
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADF-ILWKRSTPMEP 202
++ DT K E + +
Sbjct: 135 TENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKV 194
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+P R +E +S + + + G+
Sbjct: 195 CKNTPRVRDTDHLFLELPLLSDKLVNYINETSVAGM 230
>gi|163791030|ref|ZP_02185451.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
gi|159873675|gb|EDP67758.1| methionyl-tRNA synthetase [Carnobacterium sp. AT7]
Length = 675
Score = 40.5 bits (93), Expect = 0.61, Method: Composition-based stats.
Identities = 24/129 (18%), Positives = 39/129 (30%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DV+ R R + V Y +T D+ KI +A++ +N
Sbjct: 21 HIGNAYSTIACDVMARYKRMQDFD--VFY---LTGSDEHGQKIENKAQE------LNITP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + L H + + + + G Y E +
Sbjct: 70 QEYVDEMAKGMQNLWELLEISNDKFIRTTDPIHEKVVADIFERFLAQGDIYLDEYEGWYS 129
Query: 156 TSSIPNYGS 164
Y
Sbjct: 130 VPDETFYTE 138
>gi|325188174|emb|CCA22714.1| arginyltRNA synthetase putative [Albugo laibachii Nc14]
Length = 803
Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 31/275 (11%), Positives = 66/275 (24%), Gaps = 21/275 (7%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
H+G+ R I+ D + R+L + D+ AR H
Sbjct: 354 DMHVGHLRSTIIGDAICRILEFQGY-----------DV-------ARINHVGDWGTQFGM 395
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN--EIIFD 155
+I ++ + T +A + +
Sbjct: 396 LICHLIDAYPTWESEQPNVTDLTKLYKAAKERFDQDEAFRQRSKDQVVLLQSGDSHSHHV 455
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
+ + +K+ ++ NP + +R S
Sbjct: 456 WEILCDISRKEYQKVYDRLQVNLTEMGESYYNPYIPGVIERLEKKGITENSDGALVVFTK 515
Query: 216 HIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
+ M G L + HE + A + + + + G
Sbjct: 516 QFKQPFMLRKSDGSSLYDTTDIAALWYRIHEMQAAWIIYYTDYTQNDHFSLLFEVARMGG 575
Query: 276 RKMSKSNG-NFITINELLETKKFGGRSWPAPVIRL 309
+ N I + + ++ V+RL
Sbjct: 576 ILDPAKHRVNHIGFGTVNDESGKRFKTRSGEVVRL 610
>gi|295702276|ref|YP_003595351.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
gi|294799935|gb|ADF37001.1| methionyl-tRNA synthetase [Bacillus megaterium DSM 319]
Length = 660
Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI +A ++ N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD--VRY---LTGTDEHGQKIQRKAEEK------NVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + ++ G Y E +
Sbjct: 71 QQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VPDETYYTE 139
>gi|4091008|gb|AAC99620.1| methionyl-tRNA synthetase [Oryza sativa]
Length = 804
Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 54/216 (25%), Gaps = 23/216 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R V Y+ TD + E
Sbjct: 28 PYVNNVPHLGNIIGCVLSADVFARYCRLRGY--NVIYICG-TD----------EYGTATE 74
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ + I K + ++ ++ I + + +
Sbjct: 75 TKAMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWL 134
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADF-ILWKRSTPMEP 202
++ DT K E + +
Sbjct: 135 TENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKV 194
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+P R +E +S + + + G+
Sbjct: 195 CKNTPRVRDTDHLFLELPLLSDKLVNYINETSVAGM 230
>gi|227822152|ref|YP_002826123.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
gi|227341152|gb|ACP25370.1| methionyl-tRNA synthetase [Sinorhizobium fredii NGR234]
Length = 516
Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 25/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R E V + +T D+ K+ + AR+E S
Sbjct: 20 PHIGHAYELIATDAMARYQRLDGRE--VFF---LTGTDEHGQKMQQTARKEGVS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F K L H + + G Y+ + +
Sbjct: 69 PQELADRNSAEFEKMAEVLNASNDDFIRTTEKRHHEASQAIWIRMGEAGDLYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|109940177|sp|Q9ZTS1|SYM_ORYSJ RecName: Full=Probable methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|54290977|dbj|BAD61657.1| methionyl-tRNA synthetase [Oryza sativa Japonica Group]
gi|222635658|gb|EEE65790.1| hypothetical protein OsJ_21495 [Oryza sativa Japonica Group]
Length = 801
Score = 40.5 bits (93), Expect = 0.62, Method: Composition-based stats.
Identities = 26/216 (12%), Positives = 54/216 (25%), Gaps = 23/216 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R V Y+ TD + E
Sbjct: 25 PYVNNVPHLGNIIGCVLSADVFARYCRLRGY--NVIYICG-TD----------EYGTATE 71
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ + I K + ++ ++ I + + +
Sbjct: 72 TKAMEEKCSPKEICDKYHAVHSEVYKWFDIKFDKFGRTSSPQQTEVCQAIFQKLMENNWL 131
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKID-EQKMGTRVPEKYHKKNPADF-ILWKRSTPMEP 202
++ DT K E + +
Sbjct: 132 TENTMQQLYCDTCQRFLADRLVEGKCPTEGCNYEAARGDQCENCSKLLNPTELIDPKCKV 191
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
+P R +E +S + + + G+
Sbjct: 192 CKNTPRVRDTDHLFLELPLLSDKLVNYINETSVAGM 227
>gi|325860413|ref|ZP_08173525.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
gi|325482071|gb|EGC85092.1| methionine--tRNA ligase [Prevotella denticola CRIS 18C-A]
Length = 687
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KREVVFIGGSDEHGVPIT-------IRAKKEGVT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 72 ----PQDVCDRYHKLIKDSFEEFGIS-FDVYSRTTSPTHNKFASDFFRKLYDDGKLVEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E +D + +K +D + ++ P
Sbjct: 127 SEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPV 186
Query: 209 GRGRPGWHI 217
R W++
Sbjct: 187 IRKTKNWYL 195
>gi|313127143|ref|YP_004037413.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
gi|312293508|gb|ADQ67968.1| methionyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
Length = 688
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 12/48 (25%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 16 TEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
+F +P+ + CG Y HIG+ R + D+ R L+
Sbjct: 4 EDFPTENPAVV---TCGL-PYANGDLHIGHLRTYVGGDIYSRALKRLG 47
>gi|148906837|gb|ABR16564.1| unknown [Picea sitchensis]
Length = 704
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 35/171 (20%), Positives = 51/171 (29%), Gaps = 16/171 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R K V + IT D +KI A + +
Sbjct: 159 VNAPPHMGSAYTTIAADAMARFQRLQG--KKVVF---ITGTDEHGEKIAMAAAAKGQNPK 213
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
D I + + H + II G Y A+ E
Sbjct: 214 --DHCDRIACDYQALW---KDLDITYDKFIRTTNPCHEAIVKEFYTRIIAKGDIYHADYE 268
Query: 152 -IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ G E R P + K++ F L K P+E
Sbjct: 269 GLYCVNCEEYKDGKELLED--ECCPIHRKPCELRKEDNYFFSLSKYQKPLE 317
>gi|195977657|ref|YP_002122901.1| methionyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195974362|gb|ACG61888.1| methionyl-tRNA synthetase MetG [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 672
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 26/177 (14%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R + V Y +T +D+ KI ++A++ S
Sbjct: 26 HIGSAYTTIACDVLARYKRMMGYD--VFY---LTGLDEHGQKIQDKAQEAGLSPQAYVDG 80
Query: 96 -ISIITSKNTQQFVKDTTRLACLAPTHQPRATN-----------HIPQMIYLIQNIILHG 143
+ + + + H+ ++
Sbjct: 81 MAEEVKALWKLLDISYDKFIRTTDDYHEEVVAAVFERLLAQDDIYLGTYSGWYSVSDEEF 140
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
EI D + G E + K +K
Sbjct: 141 FTESQLAEIYRDEAGKVIGGVAPSGHEVEWVSEESYFLRLSKYADRLVAFFKAQPDF 197
>gi|119871860|ref|YP_929867.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
gi|187647759|sp|A1RRE2|SYM_PYRIL RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|119673268|gb|ABL87524.1| methionyl-tRNA synthetase [Pyrobaculum islandicum DSM 4184]
Length = 567
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 47/172 (27%), Gaps = 21/172 (12%)
Query: 29 YVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKII 80
YV G P V H+GN ++ DV R LR+ + V +V T I
Sbjct: 4 YVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRFRGHD--VVFVSGSDMHGTPI----- 56
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNI 139
E +I + K Q + R + ++ HI + I
Sbjct: 57 -----EVEAIQLGVDPEEYAKKMHQIVAELFKRWDISFDLYTHTHSDTHIKFVQNFFLKI 111
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G+ + E+ + R +
Sbjct: 112 YNNGYIFTKEEEVPYCPRDKIYLPDRFIIGKCPYCGYERARGDQCENCGRLL 163
>gi|294496909|ref|YP_003560609.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
gi|294346846|gb|ADE67175.1| methionyl-tRNA synthetase [Bacillus megaterium QM B1551]
Length = 660
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI +A ++ N
Sbjct: 22 HIGHAYTTVAGDAMARYKRLRGFD--VRY---LTGTDEHGQKIQRKAEEK------NVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + ++ G Y E +
Sbjct: 71 QQYVDDIVSGIKELWDKMDISYDDFIRTTEPRHKEIVEKIFARLLEQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VPDETYYTE 139
>gi|126179951|ref|YP_001047916.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
gi|125862745|gb|ABN57934.1| leucyl-tRNA synthetase [Methanoculleus marisnigri JR1]
Length = 925
Score = 40.5 bits (93), Expect = 0.63, Method: Composition-based stats.
Identities = 11/27 (40%), Positives = 13/27 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R IV DVL R R E
Sbjct: 42 GAMHVGHGRTYIVPDVLARYQRMRGKE 68
>gi|300721316|ref|YP_003710587.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
[Xenorhabdus nematophila ATCC 19061]
gi|297627804|emb|CBJ88335.1| putative Aminoacyl-tRNA synthetase, class Ia:Cupin region
[Xenorhabdus nematophila ATCC 19061]
Length = 670
Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 21/174 (12%), Positives = 43/174 (24%), Gaps = 27/174 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYY--------YGEKCVTYVRNITDIDDKIIERA 83
PT H+G+ P + DVL R+L + TYV +T A
Sbjct: 130 PTPNGDLHLGHLSGPYLAGDVLKRVLLQSGTSVHHGTGRDDNQTYV--VT-------SAA 180
Query: 84 RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR--ATNHIPQMIYLIQNIIL 141
+++ + + + + + I+ +
Sbjct: 181 KEQ-------RQPTESADFYASAINETWQGFGIDFDLFITPDNQGEYADFVHHYIELLYK 233
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
YE D + ++ + + P + K
Sbjct: 234 KDFIYEKETTAYVDHHGNTLHEAYIHGLCPYCEESSDGNACEACGRPNECTDLK 287
>gi|327312639|ref|YP_004328076.1| methionine--tRNA ligase [Prevotella denticola F0289]
gi|326945094|gb|AEA20979.1| methionine--tRNA ligase [Prevotella denticola F0289]
Length = 687
Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KREVVFIGGSDEHGVPIT-------IRAKKEGVT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 72 ----PQDVCDRYHKLIKDSFEEFGIS-FDVYSRTTSPTHNKFASDFFRKLYDDGKLVEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E +D + +K +D + ++ P
Sbjct: 127 SEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPV 186
Query: 209 GRGRPGWHI 217
R W++
Sbjct: 187 IRKTKNWYL 195
>gi|322498828|emb|CBZ33901.1| unnamed protein product [Leishmania donovani BPK282A1]
Length = 747
Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ DVL R R E +V T D+ K+ E A ++ S
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEEV---FVM--TGTDEHGQKVAEAAAKQGVS-- 272
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T+ + +F + + H + + + + G Y
Sbjct: 273 ----PMDFTTSVSSEFKECFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYLGKY 328
Query: 151 EIIFDTSSIPNYGSFSRRKIDE 172
E + S + + +
Sbjct: 329 EGWYSVSDESFLTAQNVADGVD 350
>gi|288803454|ref|ZP_06408886.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
gi|288334064|gb|EFC72507.1| methionine--tRNA ligase [Prevotella melaninogenica D18]
Length = 687
Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KREVAFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 72 ----PQDVCDRYHKLIKDSFEEFGIS-FDIYSRTTSETHHKFASDFFRKLYDDGKLVEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E +D + +K +D + ++ P
Sbjct: 127 SEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPI 186
Query: 209 GRGRPGWHI 217
+ W++
Sbjct: 187 IKRTKNWYL 195
>gi|294877102|ref|XP_002767901.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
gi|239869864|gb|EER00619.1| conserved hypothetical protein [Perkinsus marinus ATCC 50983]
Length = 162
Score = 40.5 bits (93), Expect = 0.64, Method: Composition-based stats.
Identities = 12/16 (75%), Positives = 14/16 (87%)
Query: 70 RNITDIDDKIIERARQ 85
NITDIDDKII +AR+
Sbjct: 1 MNITDIDDKIILKARK 16
>gi|239813441|ref|YP_002942351.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
gi|259511553|sp|C5CJ85|SYL_VARPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|239800018|gb|ACS17085.1| leucyl-tRNA synthetase [Variovorax paradoxus S110]
Length = 876
Score = 40.5 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 31/200 (15%), Positives = 54/200 (27%), Gaps = 24/200 (12%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
Y C Y H+G+ R + D+L R LR V D A
Sbjct: 36 YACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMSGY--NVLMPMG---WD------AFGL 84
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ + T +N + + AT + +L ++
Sbjct: 85 PAENAALKNGVPPAKWTYENIDYMRGQLQAMGLAIDWSREIATCDPSYYKWNQWLFLKML 144
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWK 195
G AY + +D + + G V + L +
Sbjct: 145 EKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVERREIPGYYLKISDYAEELLE 204
Query: 196 RSTPMEPGWESPWGRGRPGW 215
+ PGW + W
Sbjct: 205 HTQHKLPGWPERVKLMQENW 224
>gi|169604544|ref|XP_001795693.1| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
gi|160706593|gb|EAT87677.2| hypothetical protein SNOG_05286 [Phaeosphaeria nodorum SN15]
Length = 559
Score = 40.5 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 22/166 (13%), Positives = 37/166 (22%), Gaps = 20/166 (12%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R YV TD + E
Sbjct: 24 PYVNNVPHLGNIIGSVLSADVFARFARARGYNTL--YVCG-TD----------EYGTATE 70
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
+I + K + T H + I + + +G+
Sbjct: 71 TKAIEEKVTPQQLCDKYFALHSEVYEWFNISFDHFGRTPTQHQTDIAQDIFKKLYKNGYL 130
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
E + + K
Sbjct: 131 EEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQCDKCGHLL 176
>gi|68171671|ref|ZP_00545032.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
Sapulpa]
gi|67998906|gb|EAM85597.1| Arginyl-tRNA synthetase, class Ic [Ehrlichia chaffeensis str.
Sapulpa]
Length = 576
Score = 40.5 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL +
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLEKVGYQ 162
>gi|94311905|ref|YP_585115.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
gi|122987833|sp|Q1LJ30|SYL_RALME RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|93355757|gb|ABF09846.1| leucyl-tRNA synthetase [Cupriavidus metallidurans CH34]
Length = 873
Score = 40.5 bits (93), Expect = 0.65, Method: Composition-based stats.
Identities = 27/167 (16%), Positives = 49/167 (29%), Gaps = 13/167 (7%)
Query: 27 RMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR 84
+ Y C Y H+G+ R + DV+ R LR + V D
Sbjct: 40 KFYACSMLPYPSGKLHMGHVRNYTINDVMARYLRMNG--RNVLMPMG---WD---AFGMP 91
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIIL 141
E+ ++ A + T N K + + AT + +L ++
Sbjct: 92 AENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCSPEYYRWNQWLFLKMLE 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
G AY + +D + + G V ++
Sbjct: 152 KGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 198
>gi|330834236|ref|YP_004408964.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
gi|329566375|gb|AEB94480.1| methionyl-tRNA synthetase [Metallosphaera cuprina Ar-4]
Length = 568
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 19/153 (12%), Positives = 39/153 (25%), Gaps = 9/153 (5%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
P V H+GN ++ DV R R YG++ V +V D+ I A +
Sbjct: 10 PYVQSVPHLGNLIGSILSADVFARYARLKYGKENVIFVSG---SDEHGTPIEIEAIKRGV 66
Query: 89 SIP--INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ A + + + + + Y
Sbjct: 67 DPKSLTDQAHEYDKELFIKTWNISFDNYTRTESEVHKKFVREFLLGVAKYITVEEEELPY 126
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRV 179
+++ + + + R
Sbjct: 127 CEKDKLFLPDRFVKGICPYCGFEDARGDQCDRC 159
>gi|296126295|ref|YP_003633547.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
gi|296018111|gb|ADG71348.1| methionyl-tRNA synthetase [Brachyspira murdochii DSM 12563]
Length = 651
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 28/164 (17%), Positives = 54/164 (32%), Gaps = 17/164 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPIN 93
D+ HIG+ I D + R + + V + +T D +KI +A +
Sbjct: 17 DYLHIGHCYCTIAADTMARYKKIMGYD--VYF---LTGTDEHGEKIARKAEA------AD 65
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNE 151
+ RL +H R T H ++ + + + G+ Y+ +
Sbjct: 66 TTPKAYVDNIVNATKELWKRLHI-DYSHYIRTTDDYHERRVQKIFKILYDKGYIYKGAYK 124
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
++ S + K D+ K EK + + K
Sbjct: 125 GLYCVSDEAFFTESQVVKKDDGKFYCPDCEKELEYKEEECYYLK 168
>gi|323451615|gb|EGB07492.1| hypothetical protein AURANDRAFT_71802 [Aureococcus anophagefferens]
Length = 820
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 46/162 (28%), Gaps = 17/162 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
H+G+A +V DV+ R R + E +T D+ KI A +E
Sbjct: 116 GSPHMGHAYEALVTDVVARYWRLWGAETHF-----LTGADEHGQKIANTAAKEG------ 164
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + +F RL + + + + + A
Sbjct: 165 KRPIELVDECVAKFKALDARLDVSYDDYLRTTSE---RHKACCRELWRRCSASGDVFLER 221
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D F + + + K+ + +K
Sbjct: 222 YDGWYDERAECFVKASDAQLQNFCDADGIPLKRTSEECYFFK 263
>gi|301114575|ref|XP_002999057.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262111151|gb|EEY69203.1| arginyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 815
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 9/33 (27%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R+L + + K + +V
Sbjct: 365 DMHVGHLRSTIIGDTMSRILEFQGYDVKRINHV 397
>gi|86740020|ref|YP_480420.1| valyl-tRNA synthetase [Frankia sp. CcI3]
gi|86566882|gb|ABD10691.1| valyl-tRNA synthetase [Frankia sp. CcI3]
Length = 903
Score = 40.5 bits (93), Expect = 0.67, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R E V Y DD
Sbjct: 68 PTVSGSLHVGHVFSYTHTDLIARYQRMRGRE--VFYPMGF---DD 107
>gi|256545789|ref|ZP_05473145.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
gi|256398485|gb|EEU12106.1| methionine--tRNA ligase [Anaerococcus vaginalis ATCC 51170]
Length = 646
Score = 40.5 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 26/236 (11%), Positives = 61/236 (25%), Gaps = 19/236 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERAR------QEHPSI 90
HIGN ++ DVL R + +T T D+ KI+ A QE
Sbjct: 20 HIGNVYTSVIADVLKRYKALRGFDAYLT-----TGTDEHGQKIMNAALSHGSKPQEFVDR 74
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ ++ K + + ++ + + + +
Sbjct: 75 IAGET-KVLLKKLDIDYDSFIRSTDPKHEENVKNIFQYLYDKGDIYKGHYDGYYCESCES 133
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM-EPGW-ESPW 208
F S + + + + + L+K EP + ++
Sbjct: 134 --YFTESQLDDGNCPDCGRGVNHRKEESYFFRLSNYTDKLKELFKDHPEFLEPKFRQNEM 191
Query: 209 GRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
+E ++S + D+ +++ +
Sbjct: 192 LNNFIDKGLEDLSVSRNTFDWGVDVPFDNEHVVYVWIDALSCYLTAIGYGYDMEKF 247
>gi|88657836|ref|YP_507350.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
gi|109894990|sp|Q2GGT3|SYR_EHRCR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|88599293|gb|ABD44762.1| arginyl-tRNA synthetase [Ehrlichia chaffeensis str. Arkansas]
Length = 576
Score = 40.5 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL +
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLEKVGYQ 162
>gi|189502608|ref|YP_001958325.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
5a2]
gi|189498049|gb|ACE06596.1| hypothetical protein Aasi_1277 [Candidatus Amoebophilus asiaticus
5a2]
Length = 557
Score = 40.5 bits (93), Expect = 0.68, Method: Composition-based stats.
Identities = 26/160 (16%), Positives = 42/160 (26%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ I D+ R LR +K V ++ IT RA+QE
Sbjct: 21 GPIHIGHLAGVYIPADIYARYLRSK--KKEVIFISGSDEHGVPIT-------IRAQQEGI 71
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I K ++ L + + H + G
Sbjct: 72 T------PQQIVDKYHHLNKQNLQDLGISFDIFSRTSSEVHHQTASDFFTTLYNKGILIA 125
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D +S R + T +
Sbjct: 126 KETEQYYDPASHQFLADRYIRGTCPKCGYTDAYGDQCEVC 165
>gi|269958424|ref|YP_003328211.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
gi|269848253|gb|ACZ48897.1| valyl-tRNA synthetase [Anaplasma centrale str. Israel]
Length = 814
Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 65/282 (23%), Gaps = 45/282 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIE- 81
PTV H+G+ D + R R K V Y DD KI +
Sbjct: 44 PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGF---DDNGLPTERLVEKIKKL 98
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
RA Q ++ T+ + + R ++ +
Sbjct: 99 RAVQLER------------AEFTKMCREVSHEFRTKFRNLFRRLGISYDWA---LEYHTV 143
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ D + + + + T + ++ L
Sbjct: 144 SEEVQRLSQASFLDLYAKDKLYRKQQPILWDTVDCTAIAHAEVEELDLHSHL-------- 195
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
+ G I+ + + + D + H + A
Sbjct: 196 ---NTISFHTVGGEKIDIATTRPELIPACVALFFNPEDDRYTHLHGQFAVVPVGGHKVKI 252
Query: 260 -KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+ I G + + L+TK R
Sbjct: 253 LPDDKVRIDKGTGLVMCCTFGDETDVYWWRTHNLDTKTIVSR 294
>gi|153839838|ref|ZP_01992505.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
gi|149746645|gb|EDM57633.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus AQ3810]
Length = 499
Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 47/432 (10%), Positives = 109/432 (25%), Gaps = 46/432 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 76
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I+ ++ ++ + F H + + ++ + +G
Sbjct: 77 -EMIAAVSEEHQKDF---AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 132
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRG 211
+FD + + + + P +P +
Sbjct: 133 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELINPKSAVSGATPVMKD 192
Query: 212 RPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTANI 264
+ + S + + + + E+ + Q E
Sbjct: 193 SEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK 252
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
S N + L+ ++ + + Y + +
Sbjct: 253 DKFFYVWLDAPIGYMGSFKNLCNKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW-- 310
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
E + P G + + V A L L E + + +
Sbjct: 311 --PAMLEGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLDHLDPECLRYYYAAKL 368
Query: 385 FNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS--------- 427
+ + L +E + +N ++ I L + +R F+
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLSDNFAEPELYNEFVA 428
Query: 428 -ADYIRKQLESK 438
AD I +L
Sbjct: 429 AADRI-AELFEA 439
>gi|20094286|ref|NP_614133.1| methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
gi|25009365|sp|Q8TX28|SYM_METKA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|19887329|gb|AAM02063.1| Methionyl-tRNA synthetase [Methanopyrus kandleri AV19]
Length = 668
Score = 40.1 bits (92), Expect = 0.69, Method: Composition-based stats.
Identities = 20/109 (18%), Positives = 33/109 (30%), Gaps = 15/109 (13%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
HIG+ R + DV R L+ + ++ TD + I +A E
Sbjct: 18 HIGHVRSTYLPADVYTRFLKMRGIDA--IHIGG-TDNHGV--PIALQAELEGKD------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
I K + +D RL P + + Q +
Sbjct: 67 PEEIVEKYHEMIKEDLERLNIHFDEFSCTCREFNPDHVDMTQWFFKRLY 115
>gi|74420524|gb|ABA04723.1| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
Length = 692
Score = 40.1 bits (92), Expect = 0.70, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 35 VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
VY HIG+A I D L R R K V + +T D+ K+++ A++E
Sbjct: 190 VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGQKMVQTAQRE--- 241
Query: 90 IPINDAISIITSKNTQQFVK-DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N + + ++N + K D + + H + + + + +G Y +
Sbjct: 242 ---NISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLS 298
Query: 149 NNEIIFDTSSIPNYGSFS 166
N + Y
Sbjct: 299 NYSGWYSVRDEAYYAEDE 316
>gi|323140336|ref|ZP_08075268.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
gi|322415194|gb|EFY05981.1| methionine--tRNA ligase [Phascolarctobacterium sp. YIT 12067]
Length = 653
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 33/266 (12%), Positives = 64/266 (24%), Gaps = 28/266 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D L R + + V + +T D+ KI +A+++ +
Sbjct: 17 DNLHIGHAYCTTIADSLARF--HRLKGEDVFF---LTGSDEHGLKIQRKAKEKGVT---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---HAYEANN 150
F L + +++ I +
Sbjct: 68 --PIQYVDAIIANFKLLWKELNISNNDFIRTSQERHHKVVQDALQKIYEQGDIYKKNYKG 125
Query: 151 EIIFDTSSI---PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
S + + E Y K W + P + P
Sbjct: 126 LYCVPCESYWLERQLDENHCCPDCHRPVEEMEEESYFFKMSKYQDWWLQFIEEHPDFIQP 185
Query: 208 WGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
R +E ++ + D + A I+
Sbjct: 186 ASRRNEMINFVKQGLEDLCITRTTFDWGIPVPF---DKKHVVYVWFDALLNYLTGIKYGT 242
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITI 288
+ + + + K F TI
Sbjct: 243 DDAFFHKYWPASLHLVGKEIVRFHTI 268
>gi|58584862|ref|YP_198435.1| leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
malayi]
gi|81311620|sp|Q5GS31|SYL_WOLTR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|58419178|gb|AAW71193.1| Leucyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of Brugia
malayi]
Length = 865
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 20/151 (13%), Positives = 43/151 (28%), Gaps = 17/151 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R ++ DV+ R R E V + I A E+ + N
Sbjct: 42 IHMGHLRNYVIGDVIARYKRACGFE--VLH---------PIGWDAFGLPAENAARDNNVN 90
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQ---PRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ T +N + + ++ + + G Y + +
Sbjct: 91 PAAWTKENIDNMRAQLKSIGLSYNWERELSTCEADYYKHEQKFFLDFLKQGLVYRKKSWV 150
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+D + + G V ++
Sbjct: 151 NWDPIDQTVLANEQVVDGKGWRSGAIVEKRE 181
>gi|161501798|ref|NP_761825.2| methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
gi|61216347|sp|Q8D8F2|SYM_VIBVU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|319999503|gb|AAO11352.2| Methionyl-tRNA synthetase [Vibrio vulnificus CMCP6]
Length = 690
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 46/432 (10%), Positives = 105/432 (24%), Gaps = 46/432 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R + N DD I+ +A+Q S
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN------IVNFICADDAHGTPIMLKAQQMGMSPEE 77
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I + + + H + + ++ + +G
Sbjct: 78 M-----IAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQ 132
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRG 211
+FD + + + + P +P +
Sbjct: 133 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKD 192
Query: 212 RPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTANI 264
+ + S + + + + E+ + Q E
Sbjct: 193 SEHFFFDLPQFESMLKEWTRSGSLQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK 252
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
S N + L+ ++ + + Y + +
Sbjct: 253 DKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW-- 310
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ + P G + + V A L L E + + +
Sbjct: 311 --PAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKL 368
Query: 385 FNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKF----------S 426
+ + L +E + +N ++ I L + +R + F +
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEFVA 428
Query: 427 SADYIRKQLESK 438
+AD I +L
Sbjct: 429 AADRI-AELYEA 439
>gi|307566244|ref|ZP_07628690.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
gi|307345048|gb|EFN90439.1| methionine--tRNA ligase [Prevotella amnii CRIS 21A-A]
Length = 687
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 27/189 (14%), Positives = 52/189 (27%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RAR+E +
Sbjct: 23 HIGHLAGVYVPSDIYVRYLRLK--KQEVIFIGGSDEHGVPIT-------IRARKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + + R T+ H + + G E
Sbjct: 72 ----PQDVCDRYHKMIKDSFNEFGIS-FDVYSRTTSNVHNKFASDFFKKLYEDGKLIEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
E ++D S+ +K +D L ++ P
Sbjct: 127 GEQLYDESAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGSKPV 186
Query: 209 GRGRPGWHI 217
+ W++
Sbjct: 187 LKNTKNWYL 195
>gi|110803500|ref|YP_699779.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
gi|110684001|gb|ABG87371.1| methionine--tRNA ligase [Clostridium perfringens SM101]
Length = 514
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 26/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D I+ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPILNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYDKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CQKCCDTLDEF 135
>gi|19113981|ref|NP_593069.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
pombe 972h-]
gi|1351163|sp|Q09828|SYLM_SCHPO RecName: Full=Putative leucyl-tRNA synthetase, mitochondrial;
AltName: Full=Leucine--tRNA ligase; Short=LeuRS; Flags:
Precursor
gi|1022354|emb|CAA91210.1| mitochondrial leucine-tRNA ligase (predicted) [Schizosaccharomyces
pombe]
Length = 874
Score = 40.1 bits (92), Expect = 0.71, Method: Composition-based stats.
Identities = 27/154 (17%), Positives = 50/154 (32%), Gaps = 17/154 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R + D+L R R V + D A E+ +I +
Sbjct: 74 HIGHVRVYTISDILSRYYRMKGY--KVIHPMG---WD------AFGLPAENAAIENGISA 122
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
S T +N ++ + T + + +T + YL + G AY+A +
Sbjct: 123 SSWTYENIKKMKEQTYHMNIYFDWDREISTCNPDYYKWSQYLFLQMFHKGLAYQAEATVN 182
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+D + + EK + +
Sbjct: 183 WDPVDCTVLANEQVDSHGRSWRSGAIVEKKNLRQ 216
>gi|325268659|ref|ZP_08135289.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
gi|324989187|gb|EGC21140.1| methionine--tRNA ligase [Prevotella multiformis DSM 16608]
Length = 712
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 50/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 48 HIGHLAGVYVPADIYVRYLRLK--KREVVFIGGSDEHGVPIT-------IRAKKEGVT-- 96
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 97 ----PQDVCDRYHKLIKDSFEEFGIS-FDVYSRTTSPTHNKFASDFFRKLYDDGKLVEKE 151
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E +D + +K +D + ++ P
Sbjct: 152 SEQYYDEEARQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPV 211
Query: 209 GRGRPGWHI 217
R W++
Sbjct: 212 IRKTKNWYL 220
>gi|307352773|ref|YP_003893824.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307156006|gb|ADN35386.1| arginyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 554
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R ++ D L R+LR V Y N
Sbjct: 123 HVGHIRNSVIGDTLSRVLRKAGYTLEVEYYVN 154
>gi|262277217|ref|ZP_06055010.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
gi|262224320|gb|EEY74779.1| methionyl-tRNA synthetase [alpha proteobacterium HIMB114]
Length = 500
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 31/161 (19%), Positives = 55/161 (34%), Gaps = 16/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+A I DV+ R R V++ +T D+ KI +RA +EH S P+
Sbjct: 19 PHMGHAYSSIASDVIARFKRIDG--CDVSF---LTGTDEHGLKI-QRAAEEHNSDPL--- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
K +Q F+ + L H + L + + Y + +
Sbjct: 70 --SFCDKISQTFIDLSNTLNLSNTDFIRTTEERHKNTVKKLWSLLQENDQLYLSKYAGWY 127
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
S Y +I + K ++ + +K
Sbjct: 128 SVSDEAYYLENEVEEI-DGKKISKSSGSEVTWMEEESFFFK 167
>gi|225011284|ref|ZP_03701741.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
gi|225004594|gb|EEG42559.1| methionyl-tRNA synthetase [Flavobacteria bacterium MS024-3C]
Length = 689
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 21/107 (19%), Positives = 33/107 (30%), Gaps = 21/107 (19%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK---IIERAR 84
Y GP HIG+ + D+ R LR K V +V D+ I +A+
Sbjct: 18 YTNGP-----IHIGHLAGVYVPADIYSRYLR--GIGKDVAFVCG---SDEHGVAISMKAK 67
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+E + + K K H R + +
Sbjct: 68 KEGIT------PKEVIDKYHAMISKSFIDFGI-TFDHYSRTSGEMHH 107
>gi|170078301|ref|YP_001734939.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
gi|238692812|sp|B1XP90|SYL_SYNP2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|169885970|gb|ACA99683.1| leucyl-tRNA synthetase [Synechococcus sp. PCC 7002]
Length = 852
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 7/23 (30%), Positives = 12/23 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ R R
Sbjct: 49 HMGHVRNYVITDVIARYKRMQGY 71
>gi|254431958|ref|ZP_05045661.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
gi|197626411|gb|EDY38970.1| leucyl-tRNA synthetase [Cyanobium sp. PCC 7001]
Length = 880
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R + V + D A E+ +I
Sbjct: 52 HMGHVRNYVITDVIARVQRMRG--RPVLHPMG---WD------AFGLPAENAAIERGVDP 100
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N + RL + AT H
Sbjct: 101 GDWTDRNIAAMRQQLQRLGLSIDWDREVATCHADYYR 137
>gi|53802679|ref|YP_112557.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
gi|68565970|sp|Q60CR0|SYM_METCA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|53756440|gb|AAU90731.1| methionyl-tRNA synthetase [Methylococcus capsulatus str. Bath]
Length = 694
Score = 40.1 bits (92), Expect = 0.72, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 41/161 (25%), Gaps = 17/161 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + + YV DD I+ RA +E S
Sbjct: 18 GPIHLGHLVEYIQTDIWVRFQKMRGHDC--RYVC----ADDTHGTPIMLRAEKEGIS--- 68
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ ++ + ++D T + + I + G E
Sbjct: 69 ---PEELIARVHGEHLRDFTGFHIEFDNYYSTHSEETRAHAADIYGRLKDRGLIESRAIE 125
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
FD + + + +
Sbjct: 126 QYFDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYS 166
>gi|312196111|ref|YP_004016172.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Frankia
sp. EuI1c]
gi|311227447|gb|ADP80302.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Frankia
sp. EuI1c]
Length = 881
Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R E V Y DD
Sbjct: 49 PTVSGSLHVGHVFSYTHTDLIARYQRMRGRE--VFYPMGF---DD 88
>gi|302346007|ref|YP_003814360.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
gi|302149259|gb|ADK95521.1| methionine--tRNA ligase [Prevotella melaninogenica ATCC 25845]
Length = 687
Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 24/189 (12%), Positives = 50/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KREVAFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 72 ----PQDVCDRYHKLIKDSFEEFGIS-FDIYSRTTSETHHKFASDFFRKLYDDGKLVEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E +D + +K +D + ++ P
Sbjct: 127 SEQYYDEEAHQFLADRYIMGECPHCGNPNAYGDQCEKCGSDLSPMELKNPHSTISGSQPV 186
Query: 209 GRGRPGWHI 217
+ W++
Sbjct: 187 IKRTKNWYL 195
>gi|78212864|ref|YP_381643.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
gi|78197323|gb|ABB35088.1| methionyl-tRNA synthetase [Synechococcus sp. CC9605]
Length = 514
Score = 40.1 bits (92), Expect = 0.73, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 42/163 (25%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ + D L R R + VT+V T +D+ KI A ++ S
Sbjct: 12 VNDRPHLGSTYTTLACDALARFERLLG--EKVTFV---TGVDEHGQKIQRTAERQQLS-- 64
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
+ + ++ + H+ + + + G +
Sbjct: 65 ----PQDHCDRVSSRYRDLWNQWGISDDRFVRTTNPRHLELVGEFYERVKASGDIVVGKQ 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
D + + +
Sbjct: 121 TGWYCVDCEEYKDDPAEAESPSCPIHRKPLEWRDEENLFFRLS 163
>gi|255003539|ref|ZP_05278503.1| valyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
Length = 814
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 65/282 (23%), Gaps = 45/282 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIE- 81
PTV H+G+ D + R R K V Y DD KI +
Sbjct: 44 PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGF---DDNGLPTERLVEKIKKL 98
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
RA Q ++ T+ + + R ++ +
Sbjct: 99 RAVQLER------------AEFTKMCREVSHEFRTKFRNLFRRLGISYDWA---LEYHTV 143
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ D + + + + T + ++ L
Sbjct: 144 SEEVQRLSQASFLDLYAKDKLYRKQQPILWDTVDCTAIAHAEVEELDLHSHL-------- 195
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
+ G I+ + + + D + H + A
Sbjct: 196 ---NTISFHTVGGEKIDIATTRPELIPACVALFFNPEDDRYTHLHGQFAVVPVGGHKVKI 252
Query: 260 -KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+ I G + + L+TK R
Sbjct: 253 LPDDKVRIDKGTGLVMCCTFGDETDVYWWRTHNLDTKTIVSR 294
>gi|254995351|ref|ZP_05277541.1| valyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
gi|255004664|ref|ZP_05279465.1| valyl-tRNA synthetase [Anaplasma marginale str. Virginia]
Length = 815
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 65/282 (23%), Gaps = 45/282 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIE- 81
PTV H+G+ D + R R K V Y DD KI +
Sbjct: 44 PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGF---DDNGLPTERLVEKIKKL 98
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
RA Q ++ T+ + + R ++ +
Sbjct: 99 RAVQLER------------AEFTKMCREVSHEFRTKFRNLFRRLGISYDWA---LEYHTV 143
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ D + + + + T + ++ L
Sbjct: 144 SEEVQRLSQASFLDLYAKDKLYRKQQPILWDTVDCTAIAHAEVEELDLHSHL-------- 195
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
+ G I+ + + + D + H + A
Sbjct: 196 ---NTISFHTVGGEKIDIATTRPELIPACVALFFNPEDDRYTHLHGQFAVVPVGGHKVKI 252
Query: 260 -KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+ I G + + L+TK R
Sbjct: 253 LPDDKVRIDKGTGLVMCCTFGDETDVYWWRTHNLDTKTIVSR 294
>gi|330942568|gb|EGH45149.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. pisi str.
1704B]
Length = 207
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 20/170 (11%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R E V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ +N+ + + N + + + + A
Sbjct: 65 VD------PVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALRDADAI 118
Query: 147 EANNEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
E + + Y +F+R + + + + D L
Sbjct: 119 ECRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|240047288|ref|YP_002960676.1| arginyl-tRNA synthetase [Mycoplasma conjunctivae HRC/581]
gi|239984860|emb|CAT04851.1| Arginyl-tRNA synthetase [Mycoplasma conjunctivae]
Length = 518
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 18/31 (58%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT F H+G+ R I+ DVL R+L + +
Sbjct: 106 PT--GFLHLGHLRSAIIGDVLARVLEFSGNQ 134
>gi|163783161|ref|ZP_02178155.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
gi|159881495|gb|EDP75005.1| arginyl-tRNA synthetase [Hydrogenivirga sp. 128-5-R1-1]
Length = 581
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R +V D L RL R+Y N+T
Sbjct: 123 PT--GPLHLGHGRGAVVGDTLARLFRFYGY--------NVT 153
>gi|37679443|ref|NP_934052.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
gi|61216264|sp|Q7MM14|SYM_VIBVY RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|37198187|dbj|BAC94023.1| methionyl-tRNA synthetase [Vibrio vulnificus YJ016]
Length = 690
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 46/432 (10%), Positives = 105/432 (24%), Gaps = 46/432 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R + N DD I+ +A+Q S
Sbjct: 24 GSIHLGHMLEHIQADIWVRYQRLRGN------IVNFICADDAHGTPIMLKAQQMGMSPEE 77
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I + + + H + + ++ + +G
Sbjct: 78 M-----IAAVSIEHQKDFAGFDISFDNYHSTHSDENRELASHIYLQLKKNGFISSRTISQ 132
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRG 211
+FD + + + + P +P +
Sbjct: 133 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDACGETYSPTELINPKSAVSGATPVMKD 192
Query: 212 RPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTANI 264
+ + S + + + + E+ + Q E
Sbjct: 193 SEHFFFDLPQFESMLKEWTRSGSLQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK 252
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
S N + L+ ++ + + Y + +
Sbjct: 253 DKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSKTELYHFIGKDIVYFHSLFW-- 310
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ + P G + + V A L L E + + +
Sbjct: 311 --PAMLDGSGFRKPNNVFVHGYVTVNGAKMSKSKGTFVKASTYLEHLDPECLRYYYAAKL 368
Query: 385 FNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKF----------S 426
+ + L +E + +N ++ I L + +R + F +
Sbjct: 369 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFIAKRFEGKLAENFVEPELYNEFVA 428
Query: 427 SADYIRKQLESK 438
+AD I +L
Sbjct: 429 AADRI-AELYEA 439
>gi|15679444|ref|NP_276561.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
str. Delta H]
gi|3334359|sp|O27496|SYR_METTH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|2622560|gb|AAB85922.1| arginyl-tRNA synthetase [Methanothermobacter thermautotrophicus
str. Delta H]
Length = 560
Score = 40.1 bits (92), Expect = 0.74, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+LR + Y N
Sbjct: 129 HIGHIRNAIIGDSLARILRMAGYDVETQYYVN 160
>gi|217976728|ref|YP_002360875.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
gi|217502104|gb|ACK49513.1| methionyl-tRNA synthetase [Methylocella silvestris BL2]
Length = 519
Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 48/163 (29%), Gaps = 17/163 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R E +V T +D+ K+ + A +E N
Sbjct: 17 GAPHIGHAYERIATDAIARFKRLDGYETL--FV---TGMDEHGQKMQQTAARE------N 65
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHG-HAYEANN 150
+ + + QF L A +H + + +
Sbjct: 66 LSPLQLADRTAAQFYAMGELLNASADDIVRTTEARHHAASQEIWKRMQASGDIYLSKYPG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
+ + + + T P ++ ++ F L
Sbjct: 126 WYSVRDEAFFDDSELTDGPGGSKLAPTGAPVEWVEEESYYFRL 168
>gi|220908709|ref|YP_002484020.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|219865320|gb|ACL45659.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 531
Score = 40.1 bits (92), Expect = 0.75, Method: Composition-based stats.
Identities = 29/182 (15%), Positives = 52/182 (28%), Gaps = 19/182 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I DV+ R R + V IT D+ KI A + +
Sbjct: 18 VNDLPHMGSAYTTIAADVIARFYRLQG--EAVLL---ITGTDEHGQKIQRTAERLGRTPQ 72
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EAN 149
+ + + + + K + T PR H + + G Y +
Sbjct: 73 --EHCDQVVNGFVELWQKLNITYDRFSRTTDPR---HAVIVQEFFHRLWERGDIYLGQQQ 127
Query: 150 NEIIFDTSSIPNYGSFSRRKID----EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
D + ++ R + Y + + P +
Sbjct: 128 GWYCVDCEEFKEERELLKDHYCPIHIHRQAEWRDEQNYFFRLSHYQDILLDYYNKHPEFI 187
Query: 206 SP 207
P
Sbjct: 188 QP 189
>gi|222475548|ref|YP_002563965.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
gi|222419686|gb|ACM49709.1| valyl-tRNA synthetase (valS) [Anaplasma marginale str. Florida]
Length = 822
Score = 40.1 bits (92), Expect = 0.76, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 65/282 (23%), Gaps = 45/282 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIE- 81
PTV H+G+ D + R R K V Y DD KI +
Sbjct: 52 PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGF---DDNGLPTERLVEKIKKL 106
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
RA Q ++ T+ + + R ++ +
Sbjct: 107 RAVQLER------------AEFTKMCREVSHEFRTKFRNLFRRLGISYDWA---LEYHTV 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ D + + + + T + ++ L
Sbjct: 152 SEEVQRLSQASFLDLYAKDKLYRKQQPILWDTVDCTAIAHAEVEELDLHSHL-------- 203
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
+ G I+ + + + D + H + A
Sbjct: 204 ---NTISFHTVGGEKIDIATTRPELIPACVALFFNPEDDRYTHLHGQFAVVPVGGHKVKI 260
Query: 260 -KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+ I G + + L+TK R
Sbjct: 261 LPDDKVRIDKGTGLVMCCTFGDETDVYWWRTHNLDTKTIVSR 302
>gi|330970084|gb|EGH70150.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aceris str.
M302273PT]
Length = 499
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 14/167 (8%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDDKIIERARQEHPSI 90
PT HIG+ A P + DV R+ R E V+Y DD ++ +
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSY------SDD---YQSYMLRKGL 61
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEAN 149
+ + +N+ + + N + + + + A E
Sbjct: 62 ELGVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALRDAGAIECR 121
Query: 150 NEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ + Y +F+R + + + + D L
Sbjct: 122 DSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|330945683|ref|XP_003306603.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
gi|311315833|gb|EFQ85309.1| hypothetical protein PTT_19784 [Pyrenophora teres f. teres 0-1]
Length = 637
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 43/166 (25%), Gaps = 26/166 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R YV TD +A +E
Sbjct: 24 PYVNNVPHLGNIVGSVLSADVFARFSRARGYNTL--YVCG-TDEYGTA----TETKAIEE 76
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S + K + T + I
Sbjct: 77 KVS------PKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDI-------FTK 123
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
N + + ++ Y + + ++ + P ++ D
Sbjct: 124 LYKNGYLEEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQC 169
>gi|292654972|ref|YP_003534869.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
gi|291371457|gb|ADE03684.1| methionyl-tRNA synthetase [Haloferax volcanii DS2]
Length = 740
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Query: 16 TEFQAIDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
+F +P+ + CG Y HIG+ R + D+ R LR
Sbjct: 4 EDFPTENPAVV---TCGL-PYANGDLHIGHLRTYVGGDIYSRSLRTLG 47
>gi|66045985|ref|YP_235826.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. syringae B728a]
gi|63256692|gb|AAY37788.1| Methionine--tRNA ligase [Pseudomonas syringae pv. syringae B728a]
Length = 499
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 50/167 (29%), Gaps = 14/167 (8%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDDKIIERARQEHPSI 90
PT HIG+ A P + DV R+ R E V+Y DD ++ +
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSY------SDD---YQSYMLRKGL 61
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEAN 149
+ + +N+ + + N + + + + A E
Sbjct: 62 ELGVDPVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGALRDAGAIECR 121
Query: 150 NEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ + Y +F+R + + + + D L
Sbjct: 122 DSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|56417183|ref|YP_154257.1| valyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
gi|81821248|sp|Q5P9M8|SYV_ANAMM RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|56388415|gb|AAV87002.1| valyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
Length = 823
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 34/282 (12%), Positives = 65/282 (23%), Gaps = 45/282 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----------KIIE- 81
PTV H+G+ D + R R K V Y DD KI +
Sbjct: 52 PTVSGVLHMGHVFSYCHTDFIARYQRMAG--KDVFYPIGF---DDNGLPTERLVEKIKKL 106
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
RA Q ++ T+ + + R ++ +
Sbjct: 107 RAVQLER------------AEFTKMCREVSHEFRTKFRNLFRRLGISYDWA---LEYHTV 151
Query: 142 HGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ D + + + + T + ++ L
Sbjct: 152 SEEVQRLSQASFLDLYAKDKLYRKQQPILWDTVDCTAIAHAEVEELDLHSHL-------- 203
Query: 202 PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
+ G I+ + + + D + H + A
Sbjct: 204 ---NTISFHTVGGEKIDIATTRPELIPACVALFFNPEDDRYTHLHGQFAVVPVGGHKVKI 260
Query: 260 -KTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
+ I G + + L+TK R
Sbjct: 261 LPDDKVRIDKGTGLVMCCTFGDETDVYWWRTHNLDTKTIVSR 302
>gi|315636616|ref|ZP_07891850.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
gi|315479125|gb|EFU69824.1| arginine--tRNA ligase [Arcobacter butzleri JV22]
Length = 529
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ +Y + Y N
Sbjct: 115 PT--GPLHIGHARGAIFGDSLARVGKYLGYDITTEYYIN 151
>gi|326319246|ref|YP_004236918.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
gi|323376082|gb|ADX48351.1| leucyl-tRNA synthetase [Acidovorax avenae subsp. avenae ATCC
19860]
Length = 897
Score = 40.1 bits (92), Expect = 0.77, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
D + Y C Y H+G+ R + D+L R LR
Sbjct: 29 DAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHN 72
>gi|322389048|ref|ZP_08062615.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
gi|321144247|gb|EFX39658.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 903]
Length = 663
Score = 40.1 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 74 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 134 FTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193
Query: 214 G 214
Sbjct: 194 D 194
>gi|120437425|ref|YP_863111.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
gi|187647722|sp|A0M5Z9|SYM_GRAFK RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|117579575|emb|CAL68044.1| methionyl-tRNA synthetase [Gramella forsetii KT0803]
Length = 691
Score = 40.1 bits (92), Expect = 0.78, Method: Composition-based stats.
Identities = 47/439 (10%), Positives = 109/439 (24%), Gaps = 79/439 (17%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------IT------- 73
Y GP HIG+ + D+ R LR + V +V IT
Sbjct: 16 YTNGP-----IHIGHLAGVYVPADIYSRFLRMQGYD--VAFVCGSDEHGVPITIKAKKEG 68
Query: 74 ----DIDDK---IIERARQEHP------SIPINDAISIITSKNTQQFVKDTTRLACLAPT 120
D+ DK II+++ ++ S S ++ +D +
Sbjct: 69 VTPQDVVDKYNGIIKKSFEDFGITFDNYSRTSGKTHHDTASAFFKKMYEDGKFIEESTEQ 128
Query: 121 HQPRATNHIPQMIY-------LIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
+ + P ++
Sbjct: 129 LYDEEAGQFLADRFVTGTCPKCGNEEAYGDQCESCGTSLNATDLINPKSAITGAVPTLKE 188
Query: 174 KMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY-----LG 228
+P ++ ++IL K W+S W I+ + G
Sbjct: 189 TRHWFLPLDQYEDFLKEWIL-KGHKSD---WKSNVYGQVKSW-IDDGLRARAVTRDLDWG 243
Query: 229 KVFDIHGGGLDLIFPHHEN-----EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
+ GG +++ + + + W +
Sbjct: 244 IPVPVEGGDGKVLYVWFDAPIGYISSTKEWAEREGKDWEPYWKDENTKLVHFIGKDNIVF 303
Query: 284 NFITINELLETK-------KFGGRSWPAPVIRLAMLMTHYREPI-DFTVQRLTEAEILLS 335
+ I +L+ + + ++ + ++ + + ++L
Sbjct: 304 HCIIFPVMLKAHGDYILPENVPANEFLNLEGKKLSTSKNWAVWLHEYLEEFPDQQDVLRY 363
Query: 336 KWPQTSTSKGIIDPAVLSALYNDLNTVSAI--QALHKLARESTKNHDLLPIFNASAHILG 393
+ D + N + AI ++++ + K ++ G
Sbjct: 364 VLTANAPETKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYN------------G 411
Query: 394 IEVCKEHLNKNISIAIEKL 412
I ++ I +L
Sbjct: 412 IVPEPGAYSEIDEKTIAEL 430
>gi|70607280|ref|YP_256150.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
gi|76363442|sp|Q4J8M3|SYM_SULAC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|68567928|gb|AAY80857.1| methionyl-tRNA synthetase [Sulfolobus acidocaldarius DSM 639]
Length = 571
Score = 40.1 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 49/374 (13%), Positives = 96/374 (25%), Gaps = 34/374 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
P V H+GN ++ DV R R YG++ V +V D+ I AR+
Sbjct: 10 PYVNAVPHLGNLIGSILSADVFARYARLKYGKENVVFVSG---SDEHGTPIEIEARKR-- 64
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N +T + K ++ + R + + + + L +
Sbjct: 65 ----NIEPKKLTDQAHAYDKKLFIDTWKISFDNYSRTESEVHKEFVRNFLVKLEKYIKVE 120
Query: 149 NNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+EI + + F + ++ + P
Sbjct: 121 EDEIPYCEKDKLFLPDRFIKGVCPYCGFEDARGDQCDNCGRLLTPRSLVNAKCALCGNPP 180
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+ W + S P + +A S + +
Sbjct: 181 VFKVTKHWFFDLSEFGDKIRD------WISSSSTMPDNVKSVALSWVKEGLRP--RSITR 232
Query: 268 NGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRL 327
+ + N E L + + ++E + +
Sbjct: 233 DNMWGIPAPFAGAENKTIYVWFEALLGYLSATVEY----FKNLGKEEMWKEFWLYNDTKT 288
Query: 328 TEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI--- 384
+I PA+L A N S I A L E K I
Sbjct: 289 YYFIG-----KDNIPFHAVILPAMLMASNEKYNLPSVIAATEYLLYEGQKFSKSRKIGVW 343
Query: 385 FNASAHILGIEVCK 398
+ + ++ +E +
Sbjct: 344 IDEADKLMDVEYWR 357
>gi|157738329|ref|YP_001491013.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
gi|166980179|sp|A8EWM0|SYR_ARCB4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|157700183|gb|ABV68343.1| arginyl-tRNA synthetase [Arcobacter butzleri RM4018]
Length = 529
Score = 40.1 bits (92), Expect = 0.79, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ +Y + Y N
Sbjct: 115 PT--GPLHIGHARGAIFGDSLARVGKYLGYDITTEYYIN 151
>gi|258614579|ref|ZP_05712349.1| methionyl-tRNA synthetase [Enterococcus faecium DO]
Length = 413
Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats.
Identities = 23/129 (17%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I D + R R + V Y +T +D+ KI +A + +
Sbjct: 21 HIGNSYTTIACDAIARYKRLMGFD--VFY---LTGVDEHGQKIETKAEE------LGVKP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K K L H + + ++ G Y E +
Sbjct: 70 QEYVDKMAADVKKLWKTLDISYDKFIRTTDDYHKAAVQKIFDRLLEQGDIYLGEYEGWYS 129
Query: 156 TSSIPNYGS 164
S +
Sbjct: 130 VSDEEFFTE 138
>gi|189196444|ref|XP_001934560.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187980439|gb|EDU47065.1| methionyl-tRNA synthetase [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 637
Score = 40.1 bits (92), Expect = 0.80, Method: Composition-based stats.
Identities = 23/166 (13%), Positives = 43/166 (25%), Gaps = 26/166 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R YV TD +A +E
Sbjct: 24 PYVNNVPHLGNIVGSVLSADVFARFSRARGYNTL--YVCG-TDEYGTA----TETKAIEE 76
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
S + K + T + I
Sbjct: 77 KVS------PKELCDKYFALHSEVYKWFNISFDHFGRTPTQQQTDIAQDI-------FTK 123
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
N + + ++ Y + + ++ + P ++ D
Sbjct: 124 LYKNGFLEEQTTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQC 169
>gi|307353953|ref|YP_003895004.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
gi|307157186|gb|ADN36566.1| leucyl-tRNA synthetase [Methanoplanus petrolearius DSM 11571]
Length = 922
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 40/151 (26%), Gaps = 24/151 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI----TDI----------DDKIIE- 81
H+G+ R IV DV+ R R K V + T + D+K I+
Sbjct: 37 GAMHVGHGRTYIVPDVIARYYRMRG--KHVLFPMAFHVTGTPVIGISRRIANGDEKTIKL 94
Query: 82 -----RARQEHPS--IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY 134
R ++ + ++ + +S+ + +
Sbjct: 95 YRDLYRVPEDVLEKFVDPDEIVRYFSSEYERIMRNCGLSIDWRRRFTTVYPQYSKFIEWQ 154
Query: 135 LIQNIILHGHAYEANNEIIFDTSSIPNYGSF 165
+ + + A+ P
Sbjct: 155 YLHLMEGNHVVRGAHPVKYCPQCDNPVGDHD 185
>gi|229159212|ref|ZP_04287237.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
gi|228624227|gb|EEK81028.1| Methionyl-tRNA synthetase [Bacillus cereus R309803]
Length = 660
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVSGIKELWKKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|298373027|ref|ZP_06983017.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
gi|298275931|gb|EFI17482.1| methionine--tRNA ligase [Bacteroidetes oral taxon 274 str. F0058]
Length = 684
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 22/160 (13%), Positives = 41/160 (25%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR E V ++ IT +AR+E
Sbjct: 17 GPVHIGHLAGVYVPADIYARYLRNKGEE--VVFIGGSDEHGVPIT-------IKARKEGV 67
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I + + + + + H Y + + G E
Sbjct: 68 T------PQDIVDRYHEIIKRSFEEFGISFDVYSRTTSKTHYRVASYFFKKLYDKGEFIE 121
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D + R +
Sbjct: 122 QTSEQYYDEEAGQFLADRYITGKCPHCGNERAYGDQCESC 161
>gi|296876924|ref|ZP_06900969.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
gi|296432055|gb|EFH17857.1| methionine--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
Length = 663
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 74 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 134 FTESQLAEVYRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193
Query: 214 G 214
Sbjct: 194 D 194
>gi|237753349|ref|ZP_04583829.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229375616|gb|EEO25707.1| arginyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 539
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L R+ R+ Y N
Sbjct: 120 PT--GPLHIGHARGAVFGDSLARIGRFLGYTIHTEYYIN 156
>gi|218185098|gb|EEC67525.1| hypothetical protein OsI_34822 [Oryza sativa Indica Group]
Length = 349
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235
>gi|115483783|ref|NP_001065553.1| Os11g0109500 [Oryza sativa Japonica Group]
gi|113644257|dbj|BAF27398.1| Os11g0109500 [Oryza sativa Japonica Group]
Length = 311
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235
>gi|15807552|ref|NP_296288.1| arginyl-tRNA synthetase [Deinococcus radiodurans R1]
gi|39932240|sp|Q9RRC4|SYR_DEIRA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|6460396|gb|AAF12109.1|AE002086_1 arginyl-tRNA synthetase [Deinococcus radiodurans R1]
Length = 609
Score = 40.1 bits (92), Expect = 0.81, Method: Composition-based stats.
Identities = 16/79 (20%), Positives = 30/79 (37%), Gaps = 6/79 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R +++ D + R+LR V +N IDD +A + + +
Sbjct: 121 HVGHLRNVVLGDSMARILRAAGHTVEV---QNY--IDD-TGRQAAESLFATQHYGRVWDG 174
Query: 100 TSKNTQQFVKDTTRLACLA 118
K Q + +L
Sbjct: 175 VQKYDQWLGEGYVQLNADP 193
>gi|255016240|ref|ZP_05288366.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_7]
Length = 679
Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSAMHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLREWILEGHKEWKPNVYGQC 222
>gi|242036495|ref|XP_002465642.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
gi|241919496|gb|EER92640.1| hypothetical protein SORBIDRAFT_01g042830 [Sorghum bicolor]
Length = 799
Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 18/167 (10%), Positives = 39/167 (23%), Gaps = 21/167 (12%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 24 PYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA--IYICG-TD----------EYGTATE 70
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ I K + ++ ++ + I + + +
Sbjct: 71 TKAMEEKCTPKEICDKYHAIHNEVYKWFNIKFDKFGRTSSPEQTEVCHAIFHKLMENNWL 130
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
++ DT + +
Sbjct: 131 TENTMQQLYCDTCQKFLADRLVEGTCPNKACNASARGDQCETCSTLL 177
>gi|237752716|ref|ZP_04583196.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
gi|229376205|gb|EEO26296.1| methionyl-tRNA synthetase [Helicobacter winghamensis ATCC BAA-430]
Length = 657
Score = 40.1 bits (92), Expect = 0.82, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 43/142 (30%), Gaps = 13/142 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+A I+ D L R R V +T D+ KI + A++
Sbjct: 14 VNDIPHIGHAYTTIIVDTLARFHRLKGNS-----VFCLTGTDEHGQKIEQSAKKMGQDPK 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I+ + + + + H+ Y+ + G Y+ E
Sbjct: 69 N--YVDSISKRFKDLWDS---FDIAYDYFIRTTDSTHLQSAQYVFLKMYEKGDIYKGEYE 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQ 173
+ S +
Sbjct: 124 GNYCISCESFFAKSQLMSEKNC 145
>gi|258592110|emb|CBE68415.1| leucine tRNA synthetase [NC10 bacterium 'Dutch sediment']
Length = 864
Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Query: 28 MYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
MY P H+G+ R + DVL R LR
Sbjct: 40 MY---PYPSGRIHMGHVRNYAIGDVLARFLRMRGYN 72
>gi|149179757|ref|ZP_01858262.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
gi|148851949|gb|EDL66094.1| methionyl-tRNA synthetase [Bacillus sp. SG-1]
Length = 549
Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 26/132 (19%), Positives = 45/132 (34%), Gaps = 17/132 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R + + V YV N T I RA QE +
Sbjct: 26 HVGHLAALLPGDILARY--HRLKGEDVLYVSGSDCNGT----PIEIRAHQEGVKV----- 74
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
I + Q+F+ +L + + NH ++ + + +G YE E F
Sbjct: 75 -RDIADRYHQEFLDCFQKLGFSYDQYGRTDSANHHQEVQKIFLTLKDNGFLYEKTTEETF 133
Query: 155 DTSSIPNYGSFS 166
Sbjct: 134 CLHCDRFLPDRF 145
>gi|120613181|ref|YP_972859.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
gi|166230603|sp|A1TVU7|SYL_ACIAC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|120591645|gb|ABM35085.1| leucyl-tRNA synthetase [Acidovorax citrulli AAC00-1]
Length = 897
Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
D + Y C Y H+G+ R + D+L R LR
Sbjct: 29 DAGKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNGHN 72
>gi|152973886|ref|YP_001373403.1| methionyl-tRNA synthetase [Bacillus cereus subsp. cytotoxis NVH
391-98]
gi|152022638|gb|ABS20408.1| methionyl-tRNA synthetase [Bacillus cytotoxicus NVH 391-98]
Length = 659
Score = 40.1 bits (92), Expect = 0.83, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R + V Y +T D+ KI ++A + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGYD--VHY---LTGTDEHGQKIQKKAEE------LQVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++ H + + + ++ G Y E +
Sbjct: 71 QAYVDDIVAGIKDLWNKMDISYDDFIRTTEDRHKEVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|319939574|ref|ZP_08013933.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
gi|319811163|gb|EFW07469.1| methionyl-tRNA synthetase [Streptococcus anginosus 1_2_62CV]
Length = 679
Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats.
Identities = 48/323 (14%), Positives = 85/323 (26%), Gaps = 67/323 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP-------- 88
HIG+A I DVL R R + V Y +T +D+ KI ++A +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD--VFY---LTGLDEHGQKIQQKAEEAGIIPQAYVDS 88
Query: 89 -SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHG 143
++ + + ++ + + R ++ +
Sbjct: 89 MAVGVKELWKLLDISYDKFIRTTDDYHEKVVADVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM--- 200
E+ D S G E + K +
Sbjct: 149 FTESQLAEVFRDESGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLVEFFHAHPDFIQP 208
Query: 201 ------------EPGW------ESPWGRGRP-----------------------GWHIEC 219
EPG + + G P G+ +
Sbjct: 209 DGRMNEIIKNFIEPGLEDLAVSRTSFTWGVPVPSNPKHVVYVWIDALLNYATVLGYGQDD 268
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
A + H G D++ H D K + I +G+ ++ KMS
Sbjct: 269 HANFEKFWNNGTVFHMVGKDILRFHSIYWPIMLMMLD--MKLPDRLIAHGWFVMKDGKMS 326
Query: 280 KSNGNFITINELLETKKFGGRSW 302
KS GN + L+E +
Sbjct: 327 KSKGNVVYPEMLVERFGLDPLRY 349
>gi|119719527|ref|YP_920022.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|187647776|sp|A1RXT9|SYM_THEPD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|119524647|gb|ABL78019.1| methionyl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 565
Score = 40.1 bits (92), Expect = 0.84, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 45/162 (27%), Gaps = 18/162 (11%)
Query: 36 YDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKIIERARQEHPSI 90
Y H+GN ++ DV R LR V +V T I E ++
Sbjct: 19 YGVPHLGNLIGSVLSADVAARFLRLAG--DEVVFVSGSDMHGTPI----------EVEAL 66
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN 149
++ + +N ++ + R + + HI + + + +G+ +
Sbjct: 67 KRGESPKDLAERNHEKIKELFERWEISFDNYSKTESPTHIKFVQDFYRRVYENGYVFSDT 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
++ + R +
Sbjct: 127 VQLYYCPKDKIFLPDRYIVGTCPYCGYDRAYGDQCENCGRLL 168
>gi|327438102|dbj|BAK14467.1| methionyl-tRNA synthetase [Solibacillus silvestris StLB046]
Length = 653
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 25/172 (14%), Positives = 53/172 (30%), Gaps = 11/172 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG A + D + R R + V + +T +D+ KI E+A++ + D +
Sbjct: 21 HIGTAYTTVASDAIARYKRLKGFD--VRF---LTGMDEHGQKIQEKAQEANMHPQ--DYV 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-YEANNEIIFD 155
+ I + + T + R T+ + ++ + YE + +
Sbjct: 74 NEIAEGAKKLWNTMDISYNDFIQTTETRHTDSVEKIFQKFLDNGDIYKGEYEGLYCVPCE 133
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ + + + E Y P + P
Sbjct: 134 SYYTETQLVDGKCPDCGRDVQKVKEESYFFNMKKYADRLLAYYENNPEFIEP 185
>gi|327193417|gb|EGE60316.1| methionyl-tRNA synthetase protein [Rhizobium etli CNPAF512]
Length = 519
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E +
Sbjct: 23 PHIGHAYELIATDAMARYQRLDG--RDVFF---LTGTDEHGQKMQQTARAEGITA----- 72
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L H + + +G Y+ + +
Sbjct: 73 -QALADRNSGEFEAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWY 131
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 132 SVRDEAYYQENE 143
>gi|303243692|ref|ZP_07330033.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
gi|302485934|gb|EFL48857.1| Arginine--tRNA ligase [Methanothermococcus okinawensis IH1]
Length = 228
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG++R IV D L R+L + Y N
Sbjct: 134 HIGHSRNAIVGDSLKRVLEFAGYNVETQYYVN 165
>gi|261879055|ref|ZP_06005482.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
gi|270334337|gb|EFA45123.1| methionine-tRNA ligase [Prevotella bergensis DSM 17361]
Length = 691
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 21/171 (12%), Positives = 49/171 (28%), Gaps = 31/171 (18%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KQDVVFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + R T+ I ++
Sbjct: 72 ----PQEVCDRYHKMIRDSFKEFGIS-FDIYSRTTSKIH------HKFAADFFKKLYDDG 120
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ + + Y + + + ++ + P + D K + + P
Sbjct: 121 KLVEKETEQLYDEEAHQFLADRYITGTCPHCGNPNAYGDQC-EKCGSDLSP 170
>gi|170701657|ref|ZP_02892600.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170133446|gb|EDT01831.1| leucyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 864
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|146085927|ref|XP_001465394.1| methionyl-tRNA synthetase [Leishmania infantum JPCM5]
gi|134069492|emb|CAM67815.1| putative methionyl-tRNA synthetase [Leishmania infantum JPCM5]
Length = 747
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 24/142 (16%), Positives = 45/142 (31%), Gaps = 15/142 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ DVL R R E +V T D+ K+ E A ++ S
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEEV---FVM--TGTDEHGQKVAEAAAKQGVS-- 272
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T+ + +F + + H + + + + G Y
Sbjct: 273 ----PMDFTTSVSSEFKQCFKEMNYDMNYFIRTTNPTHEKLVQDIWKKLEAKGDIYLGKY 328
Query: 151 EIIFDTSSIPNYGSFSRRKIDE 172
E + S + + +
Sbjct: 329 EGWYSVSDESFLTAQNVADGVD 350
>gi|172059636|ref|YP_001807288.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|238689177|sp|B1YTA7|SYL_BURA4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|171992153|gb|ACB63072.1| leucyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 864
Score = 40.1 bits (92), Expect = 0.85, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|209549396|ref|YP_002281313.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
gi|209535152|gb|ACI55087.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM2304]
Length = 516
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E +
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--RDVFF---LTGTDEHGQKMQQTARAEGITA----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L H + + +G Y+ + +
Sbjct: 70 -QALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|162139845|ref|YP_318075.2| methionyl-tRNA synthetase [Nitrobacter winogradskyi Nb-255]
Length = 544
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 27/138 (19%), Positives = 50/138 (36%), Gaps = 17/138 (12%)
Query: 35 VY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
VY HIG+A I D L R R K V + +T D+ K+++ A++E
Sbjct: 42 VYPNGAPHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGQKMVQTAQRE--- 93
Query: 90 IPINDAISIITSKNTQQFVK-DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
N + + ++N + K D + + H + + + + +G Y +
Sbjct: 94 ---NISALELATRNAELLRKLDEALDISFDRFIRTSESAHHRSVQDIWKRMAGNGDIYLS 150
Query: 149 NNEIIFDTSSIPNYGSFS 166
N + Y
Sbjct: 151 NYSGWYSVRDEAYYAEDE 168
>gi|163938046|ref|YP_001642930.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|229009548|ref|ZP_04166775.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
gi|229053885|ref|ZP_04195320.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
gi|229131046|ref|ZP_04259959.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|163860243|gb|ABY41302.1| methionyl-tRNA synthetase [Bacillus weihenstephanensis KBAB4]
gi|228652383|gb|EEL08307.1| Methionyl-tRNA synthetase [Bacillus cereus BDRD-ST196]
gi|228721426|gb|EEL72946.1| Methionyl-tRNA synthetase [Bacillus cereus AH603]
gi|228751692|gb|EEM01491.1| Methionyl-tRNA synthetase [Bacillus mycoides DSM 2048]
Length = 660
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|124385578|ref|YP_001027213.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126450845|ref|YP_001082165.1| leucyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|166230615|sp|A3MPH9|SYL_BURM7 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|166230616|sp|A2S5J4|SYL_BURM9 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|124293598|gb|ABN02867.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126243715|gb|ABO06808.1| leucine--tRNA ligase [Burkholderia mallei NCTC 10247]
Length = 864
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 21/158 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERARQEHPSIPIND 94
H+G+ R + DV+YR LR + + E+ ++
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGM-------------PAENAAMANGV 95
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
+ T +N K + + T + +L ++ G AY+
Sbjct: 96 PPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGIAYKKTGT 155
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +D + + G V ++
Sbjct: 156 VNWDPVDQTVLANEQVIDGRGWRSGAFVEKREIPMYYM 193
>gi|53725689|ref|YP_104000.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|67643539|ref|ZP_00442284.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|121599159|ref|YP_991720.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|166998532|ref|ZP_02264390.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
gi|254179000|ref|ZP_04885654.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254202719|ref|ZP_04909082.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254208060|ref|ZP_04914410.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
gi|60390676|sp|Q62H20|SYL_BURMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|166230617|sp|A1V0G7|SYL_BURMS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|52429112|gb|AAU49705.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|121227969|gb|ABM50487.1| leucyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|147746966|gb|EDK54043.1| leucyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147751954|gb|EDK59021.1| leucyl-tRNA synthetase [Burkholderia mallei JHU]
gi|160694914|gb|EDP84922.1| leucyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|238524907|gb|EEP88337.1| leucine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|243065217|gb|EES47403.1| leucine--tRNA ligase [Burkholderia mallei PRL-20]
Length = 864
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 21/158 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERARQEHPSIPIND 94
H+G+ R + DV+YR LR + + E+ ++
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGM-------------PAENAAMANGV 95
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
+ T +N K + + T + +L ++ G AY+
Sbjct: 96 PPAQWTYENIAYMKKQMQAMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGT 155
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +D + + G V ++
Sbjct: 156 VNWDPVDQTVLANEQVIDGRGWRSGAFVEKREIPMYYM 193
>gi|319947459|ref|ZP_08021691.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
gi|319746399|gb|EFV98660.1| methionine--tRNA ligase [Streptococcus australis ATCC 700641]
Length = 663
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 74 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 134 FTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193
Query: 214 G 214
Sbjct: 194 D 194
>gi|162448397|ref|YP_001610764.1| hypothetical protein sce0127 [Sorangium cellulosum 'So ce 56']
gi|161158979|emb|CAN90284.1| metG1 [Sorangium cellulosum 'So ce 56']
Length = 696
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 34/182 (18%), Positives = 55/182 (30%), Gaps = 15/182 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+G A I DVL R R E R +T D+ KI +RA +
Sbjct: 16 DVPHLGTAYTTIAADVLCRYHRLRGHES-----RMLTGTDEHGLKI-QRAAE-----ARG 64
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
A + F +L C + H + L I G Y + E
Sbjct: 65 VAPGAHADEIAAVFRATWPKLGCAPDDFIRTSEPRHKKAVQELWSRIKARGDIYLGHYEG 124
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
++ Y + + P + K+ F L + + ++ +
Sbjct: 125 LYCVGCEAYYTEKDLEQPGNVCPLHKKPAESVKEESYFFRLSRYGDALLDYYKRNPTFVQ 184
Query: 213 PG 214
P
Sbjct: 185 PA 186
>gi|50289171|ref|XP_447015.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526324|emb|CAG59948.1| unnamed protein product [Candida glabrata]
Length = 907
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 27/150 (18%), Positives = 48/150 (32%), Gaps = 20/150 (13%)
Query: 16 TEFQAIDPSNIR-MY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
F I ++ R MY P H+G+ R ++ D L R + V +
Sbjct: 57 VPFIPIKENDKRDMYILSMFPYPSGMLHMGHLRVYVISDTLNRFYQQRGY--NVIHPMG- 113
Query: 73 TDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
D A E+ +I S T +N ++ + + + T
Sbjct: 114 --WD------AFGLPAENAAIERGIDPSEWTKQNIKKMKEQMNDMLANFNWEREVTTCDP 165
Query: 130 PQMIYL---IQNIILHGHAYEANNEIIFDT 156
+ + +G AY + EI +D
Sbjct: 166 EYYKFTQWLFLQLYKNGLAYRKDAEINWDP 195
>gi|115350603|ref|YP_772442.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122324034|sp|Q0BIB5|SYL_BURCM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|115280591|gb|ABI86108.1| leucyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 864
Score = 40.1 bits (92), Expect = 0.86, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|318041444|ref|ZP_07973400.1| leucyl-tRNA synthetase [Synechococcus sp. CB0101]
Length = 885
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 32/97 (32%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R K V + D A E+ +I
Sbjct: 52 HMGHVRNYVITDVVARVQRLRG--KKVLHPMG---WD------AFGLPAENAAIERGVDP 100
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N + +L + AT H
Sbjct: 101 GGWTDQNIASMREQLNQLGLSIDWDREVATCHADYYR 137
>gi|315929371|gb|EFV08576.1| Methionyl-tRNA synthetase [Campylobacter jejuni subsp. jejuni 305]
Length = 82
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 21/83 (25%), Positives = 29/83 (34%), Gaps = 14/83 (16%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A I+ D L R R E +T D+ KI E A+
Sbjct: 11 VNDVPHLGHAYTTIIADTLARFYRLQGHETRF-----LTGTDEHGQKIEEAAKLR----- 60
Query: 92 INDAISIITSKNTQQFVKDTTRL 114
N K + +F K
Sbjct: 61 -NSTPQEYADKISFEFKKLWDEF 82
>gi|312867085|ref|ZP_07727295.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
gi|311097214|gb|EFQ55448.1| methionine--tRNA ligase [Streptococcus parasanguinis F0405]
Length = 663
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 55/181 (30%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQP---RATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ K Q + + A + + + Y ++E
Sbjct: 74 MAVGVKELWQLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 133
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + ++S P
Sbjct: 134 FTESQLAEVFRDENGKVIGGVAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSQPDFITP 193
Query: 214 G 214
Sbjct: 194 D 194
>gi|307728927|ref|YP_003906151.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
gi|307583462|gb|ADN56860.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1003]
Length = 719
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA E +
Sbjct: 32 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPVMLRAEMEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + Q+ +D + + ++ + A
Sbjct: 81 -PKQLIDRVWQEHKRDFDSFGISFDNYYSTDSEENRVLSENVYLALKEAGLIEARDIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y + +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTDLVNPY 186
>gi|262341096|ref|YP_003283951.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
str. Bge]
gi|262272433|gb|ACY40341.1| methionine-tRNA ligase [Blattabacterium sp. (Blattella germanica)
str. Bge]
Length = 561
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 23/157 (14%), Positives = 42/157 (26%), Gaps = 18/157 (11%)
Query: 37 DFAHIGNARPMIVF--DVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
HIG+ + F DV R LR K V ++ D+ I +A++E +
Sbjct: 18 GPIHIGHL-AGVYFPADVFVRYLRRK--NKDVIFICG---SDEHGVPIAMQAKREKKT-- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANN 150
I +K T + +T H + + +E +
Sbjct: 70 ----PQEIVNKYHHMIQDCFTNFGIQFDNYSRTSTEIHYEISTSFFKKLHEKEKIFEKES 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D + +
Sbjct: 126 EQYYDEEAKQFLADRYISGQCPHCKKEEAYGDQCENC 162
>gi|302873184|ref|YP_003841817.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|307688651|ref|ZP_07631097.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
gi|302576041|gb|ADL50053.1| methionyl-tRNA synthetase [Clostridium cellulovorans 743B]
Length = 643
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 17/150 (11%), Positives = 35/150 (23%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A ++ +
Sbjct: 21 HIGNTYTTVAADALARYKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGVT------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG---HAYEANNEII 153
+ + ++ + + I + +
Sbjct: 70 KDYVDEIVAGIQDLWKLMNISYDKFIRTTDDYHKKTVQKIFKQLYDQGDIYKGAYEGWYC 129
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + ++
Sbjct: 130 TPCESFWTDTQAVDGKCPDCGRPVETAKEE 159
>gi|76799721|ref|ZP_00781816.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
gi|76584925|gb|EAO61588.1| methionyl-tRNA synthetase [Streptococcus agalactiae 18RS21]
Length = 475
Score = 40.1 bits (92), Expect = 0.87, Method: Composition-based stats.
Identities = 29/189 (15%), Positives = 50/189 (26%), Gaps = 25/189 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMGFD--VQY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 75
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K + + + ++ +
Sbjct: 76 MAESVKTLWELLDISYDKFIRTTDTYHEEAVAKIFEQLLAQGDIYLGEYTGWYSVSDEEF 135
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
E+ D + G E+ E Y + K P
Sbjct: 136 FTESQLAEVYRDENGNMIGGVAPSGHEVEKVS----EESYFFRMSKYADRLKAYYAEHPE 191
Query: 204 WESPWGRGR 212
+ P GR
Sbjct: 192 FIQPDGRMN 200
>gi|325528571|gb|EGD05674.1| leucyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 864
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|313664963|ref|YP_004046834.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
gi|312949209|gb|ADR23805.1| methionine--tRNA ligase [Mycoplasma leachii PG50]
Length = 509
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 17/155 (10%), Positives = 40/155 (25%), Gaps = 15/155 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+A + D+L R + E +T D+ KI +A++ + +
Sbjct: 19 HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEHGQKIENKAKEANLTPLEYLNP 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+ T K+ + H + + ++ G+ Y +
Sbjct: 74 KVQTFKDLWAKLNINYDKFIRTTDDY-----HEEAVQKIFTILLEKGYIYKGQYEGIYCV 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +
Sbjct: 129 SCEEFLTNEQIDENGLCKISSTKPQLVNEDTYFLK 163
>gi|310288126|ref|YP_003939385.1| Valyl-tRNA synthetase [Bifidobacterium bifidum S17]
gi|309252063|gb|ADO53811.1| Valyl-tRNA synthetase [Bifidobacterium bifidum S17]
Length = 913
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 77/282 (27%), Gaps = 50/282 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARFKRMQGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 116
Query: 73 T----DID--------D--KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
T D D D KI + + + +T+++ +QF L
Sbjct: 117 TSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKLTAQDEKQFEALWRSLGLSI 176
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
Q T + H + + + + T
Sbjct: 177 DWSQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTA 222
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V + + K + E G RP C+++ ++ + + + G
Sbjct: 223 VAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQS 282
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 283 VYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 324
>gi|260494223|ref|ZP_05814354.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|260198369|gb|EEW95885.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
Length = 636
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + TY T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---TYFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 243 EKKFDKFWNNARVVHLIGKDI 263
>gi|257463198|ref|ZP_05627597.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
gi|317060786|ref|ZP_07925271.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
gi|313686462|gb|EFS23297.1| methionyl-tRNA synthetase [Fusobacterium sp. D12]
Length = 646
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 32/252 (12%), Positives = 63/252 (25%), Gaps = 19/252 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V H+G+A I DV+ R + K V ++ TD + E +
Sbjct: 13 VNGDPHVGSAYTTIASDVMARYQKLAG--KTVYFLTG-TD-----EHGQKVEQTAHEKGF 64
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEII 153
T K F + L H + +++ + G Y+ E
Sbjct: 65 TPQAWTDKMAPAFTEMWKALNIKYSDFIRTTEPRHKNAVKKILKAVYDKGDIYKGEYEGQ 124
Query: 154 FDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPW 208
+ S + +K+ T E Y K + P + P
Sbjct: 125 YCISCETFFPENQIVEPGHCPDCGKKLSTVKEESYFFKMSKYQEALLQHIEEHPDFILPH 184
Query: 209 GR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTAN 263
R ++ ++S + I + + +
Sbjct: 185 SRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYLTAVGYENDPEK 244
Query: 264 IWIHNGFLNLEG 275
+ +
Sbjct: 245 FETYWNHARVCH 256
>gi|224283612|ref|ZP_03646934.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
Length = 913
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 77/282 (27%), Gaps = 50/282 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARFKRMQGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 116
Query: 73 T----DID--------D--KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
T D D D KI + + + +T+++ +QF L
Sbjct: 117 TSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKLTAQDEKQFEALWRSLGLSI 176
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
Q T + H + + + + T
Sbjct: 177 DWSQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTA 222
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V + + K + E G RP C+++ ++ + + + G
Sbjct: 223 VAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQS 282
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 283 VYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 324
>gi|171319956|ref|ZP_02909031.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171094786|gb|EDT39825.1| leucyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 864
Score = 40.1 bits (92), Expect = 0.88, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|313140763|ref|ZP_07802956.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
gi|313133273|gb|EFR50890.1| valyl-tRNA synthetase [Bifidobacterium bifidum NCIMB 41171]
Length = 924
Score = 40.1 bits (92), Expect = 0.89, Method: Composition-based stats.
Identities = 40/282 (14%), Positives = 77/282 (27%), Gaps = 50/282 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--------------VRNI------ 72
PTV H+G+ DV+ R R + V Y V+N
Sbjct: 70 PTVSGHLHVGHVFSYTHTDVIARFKRMQGYD--VFYPMGWDDNGLPTERRVQNYYGVRVD 127
Query: 73 T----DID--------D--KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLA 118
T D D D KI + + + +T+++ +QF L
Sbjct: 128 TSLKYDPDFKPPFEGTDGKKIDAKDQVPVSRKNFIELCEKLTAQDEKQFEALWRSLGLSI 187
Query: 119 PTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
Q T + H + + + + T
Sbjct: 188 DWSQTYHT--------------IGEHPQRVAQKAFLRNLARGEAYQQDAPGLWDVTFQTA 233
Query: 179 VPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGL 238
V + + K + E G RP C+++ ++ + + + G
Sbjct: 234 VAQAELESREYPGFYHKVAFRFEDGTPIYIETTRPELLAACTSLIANPNDERYKQYFGQS 293
Query: 239 DLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ A ++K A I + F ++ + +
Sbjct: 294 VYSPLFKVKVPILAHPAAEMDKGAGIAMCCTFGDVTDVEWWR 335
>gi|256027687|ref|ZP_05441521.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289765647|ref|ZP_06525025.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717202|gb|EFD81214.1| methionyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 639
Score = 40.1 bits (92), Expect = 0.89, Method: Composition-based stats.
Identities = 38/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + TY T +D+ K+ + A Q +
Sbjct: 17 VNGDPHVGSAYTTIAADVINRYNKAMGMD---TYFM--TGLDEHGQKVEQAAEQNGYT-- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 70 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVRRILDMVNAKGDIYKGEY 125
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 126 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 185
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 186 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYITSAGFEND 245
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 246 EKKFDKFWNNARVVHLIGKDI 266
>gi|330815527|ref|YP_004359232.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
gi|327367920|gb|AEA59276.1| Leucyl-tRNA synthetase [Burkholderia gladioli BSR3]
Length = 864
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|291303161|ref|YP_003514439.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
gi|290572381|gb|ADD45346.1| methionyl-tRNA synthetase [Stackebrandtia nassauensis DSM 44728]
Length = 597
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 22/154 (14%), Positives = 45/154 (29%), Gaps = 14/154 (9%)
Query: 40 HIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIG+ + D+ R +R + V V TD + I+ +A QE
Sbjct: 18 HIGHVAGFGVPADIFARYMRMAGHD--VLMVSG-TD-EHGTPILVQADQEGAK------P 67
Query: 97 SIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + ++ + V+D L + NH + + + + +G+ E +
Sbjct: 68 AELANRYNRVIVEDLNALGMSYDLFTRTTTANHYQVVQEMFRTVHANGYIVEKTTKGAIS 127
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
S+
Sbjct: 128 PSTGRTLPDRYIEGTCPICGYDNARGDQCDNCGN 161
>gi|150009383|ref|YP_001304126.1| methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
gi|187647739|sp|A6LFP0|SYM_PARD8 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|149937807|gb|ABR44504.1| Methionyl-tRNA synthetase [Parabacteroides distasonis ATCC 8503]
Length = 679
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYIMGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRKWILEDHKEWKPNVYGQC 222
>gi|186477336|ref|YP_001858806.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
gi|238691294|sp|B2JGX6|SYL_BURP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|184193795|gb|ACC71760.1| leucyl-tRNA synthetase [Burkholderia phymatum STM815]
Length = 864
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|78065216|ref|YP_367985.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
gi|123729057|sp|Q39JM5|SYL_BURS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|77965961|gb|ABB07341.1| leucyl-tRNA synthetase [Burkholderia sp. 383]
Length = 864
Score = 39.7 bits (91), Expect = 0.90, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|298673986|ref|YP_003725736.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
gi|298286974|gb|ADI72940.1| arginyl-tRNA synthetase [Methanohalobium evestigatum Z-7303]
Length = 563
Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 18/36 (50%), Gaps = 2/36 (5%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
H+G+ R ++ D L R+L++ Y N DI
Sbjct: 126 HVGHIRNSVIGDTLSRVLKHAGYNVRTQYYVN--DI 159
>gi|90961208|ref|YP_535124.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
[Lactobacillus salivarius UCC118]
gi|90820402|gb|ABD99041.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Lactobacillus salivarius UCC118]
Length = 675
Score = 39.7 bits (91), Expect = 0.91, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 20/181 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I DVL R R + V + +T D+ KI ++A+ +
Sbjct: 21 HIGNSYTTIACDVLARYKRLQGYD--VFF---LTGTDEHGLKIEQKAQA------LGMQP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K + +L H + + + ++ G Y +
Sbjct: 70 QEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIYLGKYRGWYS 129
Query: 156 TSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
S + R + G + D +K S + +
Sbjct: 130 VSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYADRLVKYYEEH 189
Query: 211 G 211
Sbjct: 190 P 190
>gi|329764907|ref|ZP_08256496.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
gi|329138576|gb|EGG42823.1| arginyl-tRNA synthetase [Candidatus Nitrosoarchaeum limnia SFB1]
Length = 516
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-TYV 69
HIG+ R +I+ D + R+L+ + V YV
Sbjct: 21 HIGHIRNIIIGDTIARILKKSNYKVNVLNYV 51
>gi|300214134|gb|ADJ78550.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Lactobacillus salivarius CECT 5713]
Length = 675
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 20/181 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I DVL R R + V + +T D+ KI ++A+ +
Sbjct: 21 HIGNSYTTIACDVLARYKRLQGYD--VFF---LTGTDEHGLKIEQKAQA------LGMQP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K + +L H + + + ++ G Y +
Sbjct: 70 QEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIYLGKYRGWYS 129
Query: 156 TSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
S + R + G + D +K S + +
Sbjct: 130 VSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYADRLVKYYEEH 189
Query: 211 G 211
Sbjct: 190 P 190
>gi|206561710|ref|YP_002232475.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
gi|238693126|sp|B4EEW1|SYL_BURCJ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|198037752|emb|CAR53696.1| leucyl-tRNA synthetase [Burkholderia cenocepacia J2315]
Length = 864
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|167586114|ref|ZP_02378502.1| leucyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 864
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|145257023|ref|XP_001401591.1| methionyl-tRNA synthetase [Aspergillus niger CBS 513.88]
gi|134058501|emb|CAL00710.1| unnamed protein product [Aspergillus niger]
Length = 575
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 51/332 (15%), Positives = 92/332 (27%), Gaps = 77/332 (23%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ DV+ R R G+ + +T D+ KI + A
Sbjct: 66 VNAAPHVGHLYTMVLADVIKRW-RTLIGDAD---AQLLTGTDEHGMKIQQAALAAEMDTQ 121
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
++ T + A + + R T H + Y + + G+ Y A
Sbjct: 122 AFCDMNYKT-------FEALANAANMDYNYFIRTTEPAHKEAVQYFWEVLEHRGYVYTAK 174
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI----------------- 192
+E + S Y +K + + G ++
Sbjct: 175 HEGWYSVSDETFYPQTQVQKSLDPETGHTKMVSIETGKEVEWSSETNYHFRLSAFQERLL 234
Query: 193 ----------------LWKRSTP-------MEPGWESPWGRGRPGWHIECSAMSSH---- 225
+ K + P WG PG + + +
Sbjct: 235 DLYKTGFITPTMYTTNVVKSVSEGLQDLSISRPAERLTWGIPVPGDNTQTVYVWLDALVN 294
Query: 226 ---------------YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
+LG D+H G D++ H A D + +G
Sbjct: 295 YLTKAGYPFAPGQGSHLGWPADVHVVGKDIVRFHCVYWPAFLMALD--LPLPRNVLVHGH 352
Query: 271 LNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ KMSKS GN + + +
Sbjct: 353 WTMNREKMSKSTGNVVNPFFAINRFGVDSMRF 384
>gi|189082975|sp|A4YI28|SYL2_METS5 RecName: Full=Leucyl-tRNA synthetase 2; AltName:
Full=Leucine--tRNA ligase 2; Short=LeuRS 2
gi|145702938|gb|ABP96080.1| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 950
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
H+G+ R + DV R +R V +
Sbjct: 54 HLGHGRTYVTGDVYARFMRMKGY--NVLFPMGF 84
>gi|119181183|ref|XP_001241833.1| hypothetical protein CIMG_05729 [Coccidioides immitis RS]
Length = 581
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 14/150 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ +++ D+L R + +T D+ KI + A
Sbjct: 60 VNASPHVGHLYTLVLADILKRWQVLLGNND----AQLLTGTDEHGIKIQQAAASHGLEPI 115
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
+ +N Q F + H + Y + + G+ Y A +
Sbjct: 116 K------LCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKH 169
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
E + S Y S + + G ++
Sbjct: 170 EGWYSVSDETFYPSNAVHATLDPATGRKIM 199
>gi|170731974|ref|YP_001763921.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
gi|254246337|ref|ZP_04939658.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
gi|238688589|sp|B1JVG9|SYL_BURCC RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|124871113|gb|EAY62829.1| Leucyl-tRNA synthetase [Burkholderia cenocepacia PC184]
gi|169815216|gb|ACA89799.1| leucyl-tRNA synthetase [Burkholderia cenocepacia MC0-3]
Length = 864
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|134294734|ref|YP_001118469.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
gi|166230620|sp|A4JBI1|SYL_BURVG RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|134137891|gb|ABO53634.1| leucyl-tRNA synthetase [Burkholderia vietnamiensis G4]
Length = 864
Score = 39.7 bits (91), Expect = 0.92, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|301299606|ref|ZP_07205867.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300852793|gb|EFK80416.1| methionine--tRNA ligase [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 675
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 20/181 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I DVL R R + V + +T D+ KI ++A+ +
Sbjct: 21 HIGNSYTTIACDVLARYKRLQGYD--VFF---LTGTDEHGLKIEQKAQA------LGMQP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K + +L H + + + ++ G Y +
Sbjct: 70 QEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIYLGKYRGWYS 129
Query: 156 TSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
S + R + G + D +K S + +
Sbjct: 130 VSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYADRLVKYYEEH 189
Query: 211 G 211
Sbjct: 190 P 190
>gi|294787261|ref|ZP_06752514.1| valine--tRNA ligase [Parascardovia denticolens F0305]
gi|294484617|gb|EFG32252.1| valine--tRNA ligase [Parascardovia denticolens F0305]
Length = 970
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R + V Y DD
Sbjct: 74 PTVSGHLHVGHVFSYTHTDIIARFKRMNGYD--VFYPMG---WDD 113
>gi|238026215|ref|YP_002910446.1| leucyl-tRNA synthetase [Burkholderia glumae BGR1]
gi|237875409|gb|ACR27742.1| Leucyl-tRNA synthetase [Burkholderia glumae BGR1]
Length = 864
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|229165027|ref|ZP_04292823.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
gi|228618412|gb|EEK75441.1| Methionyl-tRNA synthetase [Bacillus cereus AH621]
Length = 660
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|209522384|ref|ZP_03270997.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
gi|209497181|gb|EDZ97423.1| methionyl-tRNA synthetase [Burkholderia sp. H160]
Length = 711
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 25/167 (14%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA QE +
Sbjct: 32 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPVMLRAEQEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ ++ + + A
Sbjct: 81 -PKQLIDRVWLEHKRDFDNFGISFDNYYSTDSDENRVLSENVYLALKEAGLIDAREIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYLPTELVNPY 186
>gi|162149625|ref|YP_001192004.2| leucyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 938
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
H+G+ R + DV R +R V +
Sbjct: 42 HLGHGRTYVTGDVYARFMRMKGY--NVLFPMGF 72
>gi|107021731|ref|YP_620058.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116688677|ref|YP_834300.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
gi|123245293|sp|Q1BZ70|SYL_BURCA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|166230614|sp|A0K4I0|SYL_BURCH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|105891920|gb|ABF75085.1| leucyl-tRNA synthetase [Burkholderia cenocepacia AU 1054]
gi|116646766|gb|ABK07407.1| leucyl-tRNA synthetase [Burkholderia cenocepacia HI2424]
Length = 864
Score = 39.7 bits (91), Expect = 0.93, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|315227182|ref|ZP_07868969.1| valyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
gi|315119632|gb|EFT82765.1| valyl-tRNA synthetase [Parascardovia denticolens DSM 10105]
Length = 987
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R + V Y DD
Sbjct: 91 PTVSGHLHVGHVFSYTHTDIIARFKRMNGYD--VFYPMG---WDD 130
>gi|303314943|ref|XP_003067480.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240107148|gb|EER25335.1| methionyl-tRNA synthetase, putative [Coccidioides posadasii C735
delta SOWgp]
Length = 568
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 53/428 (12%), Positives = 105/428 (24%), Gaps = 77/428 (17%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS-- 89
V H+G+ +++ D+L R + +T D+ KI + A
Sbjct: 60 VNASPHVGHLYTLVLADILKRWQVLLGNND----AQLLTGTDEHGIKIQQAAASHGLEPI 115
Query: 90 ---IPINDAISIITS----------KNTQQFVKD--TTRLACLAPTHQPRATNHIPQMIY 134
+ + T +D L H
Sbjct: 116 KLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKHEGWYSV 175
Query: 135 LIQNII----------------LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + F ++ S + ++ +
Sbjct: 176 SDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDRLLDFYRENP 235
Query: 179 VPEKYHKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSH-------YL 227
+ + + P WG PG + + Y
Sbjct: 236 TFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLDALINYLTYA 295
Query: 228 GKVF------------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
G F ++H G D++ H A D + + +
Sbjct: 296 GYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALD--LPLPRQVLSHAHWTIGR 353
Query: 276 RKMSKSNGNFITINELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQR 326
KMSKS GN + L + A + Y++ + + V
Sbjct: 354 EKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKTLQWGVGN 413
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
LT + KW + + ++ D ++ + + R D L
Sbjct: 414 LTSRLVRSKKWNVRRSIEWGVEGRFPPPSEADRKHQQLLEGIRDVTR---SWMDDLNPRK 470
Query: 387 ASAHILGI 394
A+ ++GI
Sbjct: 471 AAESVVGI 478
>gi|190891834|ref|YP_001978376.1| methionyl-tRNA synthetase [Rhizobium etli CIAT 652]
gi|190697113|gb|ACE91198.1| methionyl-tRNA synthetase protein [Rhizobium etli CIAT 652]
Length = 516
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E +
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--RDVFF---LTGTDEHGQKMQQTARAEGITA----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L H + + +G Y+ + +
Sbjct: 70 -QALADRNSGEFQAMAKLLNASNDDFIRTTQERHHETSRNIWNLMAENGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|254253255|ref|ZP_04946573.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
gi|124895864|gb|EAY69744.1| Leucyl-tRNA synthetase [Burkholderia dolosa AUO158]
Length = 864
Score = 39.7 bits (91), Expect = 0.94, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYN 72
>gi|325971031|ref|YP_004247222.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
gi|324026269|gb|ADY13028.1| Methionyl-tRNA synthetase [Spirochaeta sp. Buddy]
Length = 741
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 20/165 (12%), Positives = 39/165 (23%), Gaps = 19/165 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----EH 87
P V + H+GN ++ DV R R E Y+ TD + E
Sbjct: 14 PYVNNIPHLGNLTQVLSADVFARFCRSKGYETL--YICG-TD----------EYGTATET 60
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAY 146
++ + + + +T +++ I + G+
Sbjct: 61 RALKEGVSPRELCDRYHAIHRDIYAWFNIAFDYFGRTSTPEQTKIVQDIFTKVDAAGYIS 120
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
E E ++ S
Sbjct: 121 EHELEQLYCPSCQRFLADRFVEGTCPHCHSEGARGDQCDSCQTLL 165
>gi|322434798|ref|YP_004217010.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
gi|321162525|gb|ADW68230.1| methionyl-tRNA synthetase [Acidobacterium sp. MP5ACTX9]
Length = 848
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 29/163 (17%), Positives = 45/163 (27%), Gaps = 15/163 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A IV DVL R R +T D+ KI A
Sbjct: 17 VNARPHIGHAYTTIVADVLARRARAQGTPTWF-----LTGTDEHGQKIERSALAAGI--- 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T + + F R+ + H + L ++ G Y +
Sbjct: 69 ---PPQTFTDQVSASFRDLWKRMGITNDQYIRTTDEAHKKGVQKLFADLHAKGQIYLSTY 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
+ + K V E+ +D+ L
Sbjct: 126 TGQYSIGEEMFVEGPPGTIGPDGKPTETVTEENFFFRLSDYQL 168
>gi|238619786|ref|YP_002914612.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|238380856|gb|ACR41944.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|323474679|gb|ADX85285.1| arginyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323477413|gb|ADX82651.1| arginyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 625
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
HIG+ R I+ D L R L+ V + N T
Sbjct: 124 HIGHLRNTILGDALARALKARGHSVNVRFYVNDT 157
>gi|227891852|ref|ZP_04009657.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
[Lactobacillus salivarius ATCC 11741]
gi|227866315|gb|EEJ73736.1| methionyl-tRNA synthetase / protein secretion chaperonin CsaA
[Lactobacillus salivarius ATCC 11741]
Length = 675
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 27/181 (14%), Positives = 50/181 (27%), Gaps = 20/181 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN+ I DVL R R + V + +T D+ KI ++A+ +
Sbjct: 21 HIGNSYTTIACDVLARYKRLQGYD--VFF---LTGTDEHGLKIEQKAQA------LGMQP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
K + +L H + + + ++ G Y +
Sbjct: 70 QEYVDKMAADIKELWKKLEITNDKFIRTTDDYHEKAVQNIFEKLLAKGDIYLGKYRGWYS 129
Query: 156 TSSIPNYG-----SFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
S + R + G + D +K S + +
Sbjct: 130 VSDEEYFTESQLAEVYRDEDGNMIGGKAPSGHEVQLVEEDCYFFKMSKYADRLVKYYEEH 189
Query: 211 G 211
Sbjct: 190 P 190
>gi|160893725|ref|ZP_02074509.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
gi|156864710|gb|EDO58141.1| hypothetical protein CLOL250_01279 [Clostridium sp. L2-50]
Length = 678
Score = 39.7 bits (91), Expect = 0.95, Method: Composition-based stats.
Identities = 19/151 (12%), Positives = 44/151 (29%), Gaps = 17/151 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R+ + V + T D+ KI +A +
Sbjct: 19 PHIGNTYEIVLADSIARYKRFAGYD--VRFQ---TGTDEHGQKIENKAFEN------MQT 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN--NEI 152
+ + + + +H Q+ + + + G Y+ +
Sbjct: 68 PKEFVDEISGEIKDIWDLMNTSYDKFIRTTDADHERQVQKIFRKLYDQGDIYKGEYVGKY 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + + ++
Sbjct: 128 CTPCESFFTDSQLVDGKCPDCGRPVQEAKEE 158
>gi|221202477|ref|ZP_03575508.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
gi|221208066|ref|ZP_03581071.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221171969|gb|EEE04411.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2]
gi|221177650|gb|EEE10066.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD2M]
Length = 864
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYN 72
>gi|229582117|ref|YP_002840516.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|228012833|gb|ACP48594.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
Length = 625
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
HIG+ R I+ D L R L+ V + N T
Sbjct: 124 HIGHLRNTILGDALARALKARGHSVNVRFYVNDT 157
>gi|161525901|ref|YP_001580913.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189349380|ref|YP_001945008.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|238687066|sp|A9AHA9|SYL_BURM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|160343330|gb|ABX16416.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
gi|189333402|dbj|BAG42472.1| leucyl-tRNA synthetase [Burkholderia multivorans ATCC 17616]
Length = 864
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYN 72
>gi|15897753|ref|NP_342358.1| arginyl-tRNA synthetase [Sulfolobus solfataricus P2]
gi|227830317|ref|YP_002832097.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|229579142|ref|YP_002837540.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284997739|ref|YP_003419506.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
gi|23822202|sp|Q97ZN1|SYR_SULSO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|13814038|gb|AAK41148.1| Arginyl-tRNA synthetase (argS) [Sulfolobus solfataricus P2]
gi|227456765|gb|ACP35452.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|228009856|gb|ACP45618.1| arginyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|284445634|gb|ADB87136.1| arginyl-tRNA synthetase [Sulfolobus islandicus L.D.8.5]
Length = 625
Score = 39.7 bits (91), Expect = 0.96, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
HIG+ R I+ D L R L+ V + N T
Sbjct: 124 HIGHLRNTILGDALARALKARGHSVNVRFYVNDT 157
>gi|315604680|ref|ZP_07879743.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
gi|315313692|gb|EFU61746.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 180 str. F0310]
Length = 903
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV HIG+ DV+ R R K V Y DD
Sbjct: 54 PTVSGSLHIGHVFSYTHTDVVARYQRMMG--KSVFYPMG---WDD 93
>gi|301312294|ref|ZP_07218211.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
gi|300829716|gb|EFK60369.1| methionine--tRNA ligase [Bacteroides sp. 20_3]
Length = 679
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLKDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRKWILEDHKEWKPNVYGQC 222
>gi|221213180|ref|ZP_03586155.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
gi|221166632|gb|EED99103.1| leucyl-tRNA synthetase [Burkholderia multivorans CGD1]
Length = 864
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 13/24 (54%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYN 72
>gi|260783797|ref|XP_002586958.1| hypothetical protein BRAFLDRAFT_99311 [Branchiostoma floridae]
gi|229272090|gb|EEN42969.1| hypothetical protein BRAFLDRAFT_99311 [Branchiostoma floridae]
Length = 3017
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 26/254 (10%), Positives = 52/254 (20%), Gaps = 15/254 (5%)
Query: 118 APTHQPRATNHIP-QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMG 176
+ +H+ + A + + + F E G
Sbjct: 1888 PCQNGATCHDHVNFWTCSCVPGWFGVDCADNVDECVSNPCQNNATCHDFVNYYTCECIPG 1947
Query: 177 TRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH-IECSAMSSHYLGKVFDIHG 235
N + PGW ++CS + +
Sbjct: 1948 WDGIHCEIDINECSSSPCQNGASCHDHINYWSCSCAPGWFGLDCSDNTDECASNPCQNNA 2007
Query: 236 GGLDLIFPHHENEIAQSCCADRIEKTA------NIWIHNGFLNLEGRKMSKSNGNFITIN 289
D + +E E A E T N W+ + + +
Sbjct: 2008 TCHDGLTYFYECECAAGWEGVDCEITFLGYTVENGWLLGDSITNSNWTGGAIDD---ILE 2064
Query: 290 ELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKG---- 345
+ + F R+ + + + W
Sbjct: 2065 DCFQPDNFPFRTNNRCIYTDECASDPCQNGATCHDSVNEYSCECAPGWEGIHCQDNTDEC 2124
Query: 346 IIDPAVLSALYNDL 359
DP +A +D
Sbjct: 2125 ASDPCQNNATCHDF 2138
>gi|15236350|ref|NP_193114.1| methionine--tRNA ligase, putative / methionyl-tRNA synthetase,
putative / MetRS, putative [Arabidopsis thaliana]
gi|12230648|sp|Q9SVN5|SYM_ARATH RecName: Full=Probable methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|4455307|emb|CAB36842.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
gi|7268082|emb|CAB78420.1| methionyl-tRNA synthetase-like protein [Arabidopsis thaliana]
gi|17381106|gb|AAL36365.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
gi|20259315|gb|AAM14393.1| putative methionyl-tRNA synthetase [Arabidopsis thaliana]
gi|332657924|gb|AEE83324.1| methionyl-tRNA synthetase [Arabidopsis thaliana]
Length = 797
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 42/388 (10%), Positives = 82/388 (21%), Gaps = 53/388 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 26 PYVNNVPHLGNIIGCVLSADVYARYCRLRGYNA--IYICG-TD----------EYGTATE 72
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGH- 144
++ N I K + +T ++ I + +
Sbjct: 73 TKALEENCTPKEICDKYHAIHKEVYDWFGISFDKFGRTSTPEQTEVCQAIFNKLWDNKWL 132
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+ ++ DT + Y K + P
Sbjct: 133 SENTMQQLYCDT------CKKFLADRLVEGSCPFEGCNYDSARGDQC--EKCGKLLNP-- 182
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
E I D +F + +
Sbjct: 183 ------------TELKDPKCKVCQNTPRI--RDTDHLFIELPLLKDRLEAYIKKTSVTGS 228
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDF 322
W N IT +L + V + + +
Sbjct: 229 WSQNAIQTTNAWLRDGLRQRCIT-RDLKWGVPVPHEKYKDKVFYVWFDAPIGYVSITSCY 287
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL-ARESTKNHDL 381
T + + + K + + L T + + E D
Sbjct: 288 TSEWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTEENWTLMKTISVTEYLNYEDG 347
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAI 409
+ + G + + NI + +
Sbjct: 348 KFSKSKGVGVFG----NDVKDTNIPVEV 371
>gi|23016029|ref|ZP_00055790.1| COG0495: Leucyl-tRNA synthetase [Magnetospirillum magnetotacticum
MS-1]
Length = 866
Score = 39.7 bits (91), Expect = 0.97, Method: Composition-based stats.
Identities = 29/178 (16%), Positives = 56/178 (31%), Gaps = 20/178 (11%)
Query: 14 KITEFQA-IDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVR 70
+ F+A I P + YV P H+G+ R + DV+ R R V +
Sbjct: 31 EKRCFEAEIAPGKPKYYVLEMFPYPSGRIHMGHVRNYTLGDVVARYKRAKGF--NVLHPM 88
Query: 71 NITDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
D A E+ +I N + T +N + + + AT
Sbjct: 89 G---WD------AFGLPAENAAISNNVHPAKWTRENIAAMREQLKSMGLSYDWRREVATC 139
Query: 128 ---HIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ + + + +G Y + + +D + + G V ++
Sbjct: 140 EPQYYRHEQKMFLDFLKNGLVYRKESWVNWDPVENTVLANEQVIDGHGWRSGALVEKR 197
>gi|317969890|ref|ZP_07971280.1| leucyl-tRNA synthetase [Synechococcus sp. CB0205]
Length = 882
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 19/97 (19%), Positives = 31/97 (31%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R K V + D A E+ +I
Sbjct: 52 HMGHVRNYVITDVVARVQRLRG--KKVLHPMG---WD------AFGLPAENAAIERGVDP 100
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N +L + AT H
Sbjct: 101 GAWTDQNIASMRDQLDQLGLSIDWDRELATCHDDYYR 137
>gi|257466511|ref|ZP_05630822.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917667|ref|ZP_07913907.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691542|gb|EFS28377.1| methionyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 640
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 32/255 (12%), Positives = 70/255 (27%), Gaps = 25/255 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + K V + +T D+ K+ + A+++ +
Sbjct: 13 VNGDPHVGSAYTTIAADVMSRYQKLAG--KNVYF---LTGTDEHGQKVEQTAKEKGFT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T K F + L H + +++ + G Y+
Sbjct: 66 ----PQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEY 121
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + +K+ T E Y + + P +
Sbjct: 122 EGQYCISCETFFPENQIVEAGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHPDFI 181
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
P R ++ ++S + I + + +
Sbjct: 182 LPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYEND 241
Query: 261 TANIWIHNGFLNLEG 275
+ + +
Sbjct: 242 SEKFDTYWNNARVCH 256
>gi|227827629|ref|YP_002829409.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|229584833|ref|YP_002843335.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|227459425|gb|ACP38111.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|228019883|gb|ACP55290.1| arginyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
Length = 625
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
HIG+ R I+ D L R L+ V + N T
Sbjct: 124 HIGHLRNTILGDALARALKARGHSVNVRFYVNDT 157
>gi|76808938|ref|YP_334822.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|76578391|gb|ABA47866.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
Length = 913
Score = 39.7 bits (91), Expect = 0.98, Method: Composition-based stats.
Identities = 21/158 (13%), Positives = 45/158 (28%), Gaps = 21/158 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-----TYVRNITDIDDKIIERARQEHPSIPIND 94
H+G+ R + DV+YR LR + + E+ ++
Sbjct: 98 HMGHVRNYTINDVMYRYLRMNGYNTLMPMGWDAFGM-------------PAENAAMANGV 144
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNE 151
+ T +N K + + T + +L ++ G AY+
Sbjct: 145 PPAQWTYENIAYMKKQMQSMGLAIDWSREVTTCKPDYYKWNQWLFLKMLEKGVAYKKTGT 204
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +D + + G V ++
Sbjct: 205 VNWDPVDQTVLANEQVIDGRGWRSGALVEKREIPMYYM 242
>gi|255513996|gb|EET90260.1| tRNA synthetase valyl/leucyl anticodon-binding [Candidatus
Micrarchaeum acidiphilum ARMAN-2]
Length = 946
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 32/136 (23%), Gaps = 19/136 (13%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAIS 97
H+G+ R D R LR V Y I
Sbjct: 43 PPHLGHLRTYGTADFYARYLRMRG--LNVLYPM-----------------AWHFTGTPIL 83
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
I + + L + A P I ++++ A I + +
Sbjct: 84 AIAKRVAANDEELKEELRMYHIDDETMAKMSDPNFITEYFSVLMKDAMVRAGYSIDWRRT 143
Query: 158 SIPNYGSFSRRKIDEQ 173
FS+ +
Sbjct: 144 FNTLDPLFSKMVEWQF 159
>gi|229015441|ref|ZP_04172443.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
gi|229021646|ref|ZP_04178233.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228739649|gb|EEL90058.1| Methionyl-tRNA synthetase [Bacillus cereus AH1272]
gi|228745860|gb|EEL95860.1| Methionyl-tRNA synthetase [Bacillus cereus AH1273]
Length = 660
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 20/128 (15%), Positives = 38/128 (29%), Gaps = 15/128 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVSGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYG 163
Y
Sbjct: 131 VQDETFYT 138
>gi|167837875|ref|ZP_02464758.1| leucyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 864
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|83721013|ref|YP_441758.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|83654838|gb|ABC38901.1| leucyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 882
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 67 HMGHVRNYTINDVMYRYLRMNGYNT 91
>gi|320037850|gb|EFW19787.1| methionyl-tRNA synthetase [Coccidioides posadasii str. Silveira]
Length = 584
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 53/428 (12%), Positives = 105/428 (24%), Gaps = 77/428 (17%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS-- 89
V H+G+ +++ D+L R + +T D+ KI + A
Sbjct: 60 VNASPHVGHLYTLVLADILKRWQVLLGNND----AQLLTGTDEHGIKIQQAAASHGLEPI 115
Query: 90 ---IPINDAISIITS----------KNTQQFVKD--TTRLACLAPTHQPRATNHIPQMIY 134
+ + T +D L H
Sbjct: 116 KLCDQNCQTFKDLAQKANVQHDHFIRTTDPEHRDAVQYFWEMLDHRGYIYTAKHEGWYSV 175
Query: 135 LIQNII----------------LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + F ++ S + ++ +
Sbjct: 176 SDETFYPSNAVHATLDPATGRKIMSTIETGKEVEWFSETNYHFRLSAFKDRLLDFYRENP 235
Query: 179 VPEKYHKKNPADFILWKRS----TPMEPGWESPWGRGRPGWHIECSAMSSH-------YL 227
+ + + P WG PG + + Y
Sbjct: 236 TFIRPKRYMDNIVQSVSSGLTDLSISRPVQRLTWGIRVPGDDTQTIYVWLDALINYLTYA 295
Query: 228 GKVF------------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEG 275
G F ++H G D++ H A D + + +
Sbjct: 296 GYPFTPGKENQSIWPANVHVVGKDILRFHCVYWPAFLMALD--LPLPRQVLSHAHWTIGR 353
Query: 276 RKMSKSNGNFITINELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQR 326
KMSKS GN + L + A + Y++ + + V
Sbjct: 354 EKMSKSTGNVVNPMYALARFGVDPLRFYLAHDGGLSDDADYENAFVTERYKKTLQWGVGN 413
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFN 386
LT + KW + + ++ D ++ + + R D L
Sbjct: 414 LTSRLVRSKKWNVRRSIEWGVEGRFPPPSEADRKHQQLLEGIRDVTR---SWMDDLNPRK 470
Query: 387 ASAHILGI 394
A+ ++GI
Sbjct: 471 AAESVVGI 478
>gi|293189669|ref|ZP_06608386.1| valyl-tRNA synthetase [Actinomyces odontolyticus F0309]
gi|292821407|gb|EFF80349.1| valyl-tRNA synthetase [Actinomyces odontolyticus F0309]
Length = 903
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV HIG+ DV+ R R K V Y DD
Sbjct: 54 PTVSGSLHIGHVFSYTHTDVVARYQRMTG--KSVFYPMG---WDD 93
>gi|167580573|ref|ZP_02373447.1| leucyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
Length = 864
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|67922684|ref|ZP_00516188.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
[Crocosphaera watsonii WH 8501]
gi|67855466|gb|EAM50721.1| Leucyl-tRNA synthetase bacterial/mitochondrial, class Ia
[Crocosphaera watsonii WH 8501]
Length = 853
Score = 39.7 bits (91), Expect = 0.99, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 42/123 (34%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ RL R V + D A E+ +I N
Sbjct: 49 HMGHVRNYVITDVIARLKRLQGY--RVLHPMG---WD------AFGLPAENAAIDRNIPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T +N Q + L + AT + +L G AY+ +
Sbjct: 98 ADWTKQNIAQMRQQLQTLGLSIDWDREVATCFPDYYKWTQWLFLQFYQSGLAYQKEAAVN 157
Query: 154 FDT 156
+D
Sbjct: 158 WDP 160
>gi|189083244|sp|Q2SZ91|SYL_BURTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|167618683|ref|ZP_02387314.1| leucyl-tRNA synthetase [Burkholderia thailandensis Bt4]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|53720546|ref|YP_109532.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|126451947|ref|YP_001067687.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|167740200|ref|ZP_02412974.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 14]
gi|167904281|ref|ZP_02491486.1| leucyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
gi|217420600|ref|ZP_03452105.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
gi|242314927|ref|ZP_04813943.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254199150|ref|ZP_04905565.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|254299271|ref|ZP_04966721.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|60390678|sp|Q63QT6|SYL_BURPS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|166230618|sp|A3NZB6|SYL_BURP0 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|52210960|emb|CAH36948.1| leucyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|126225589|gb|ABN89129.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|157808838|gb|EDO86008.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|169656980|gb|EDS88377.1| leucyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|217396012|gb|EEC36029.1| leucine--tRNA ligase [Burkholderia pseudomallei 576]
gi|242138166|gb|EES24568.1| leucine--tRNA ligase [Burkholderia pseudomallei 1106b]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|260222016|emb|CBA31159.1| Leucyl-tRNA synthetase [Curvibacter putative symbiont of Hydra
magnipapillata]
Length = 922
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
P + Y C Y H+G+ R + D+L R LR
Sbjct: 41 KPKK-KFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHN 83
>gi|221126343|ref|XP_002166348.1| PREDICTED: hypothetical protein [Hydra magnipapillata]
Length = 904
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 12/44 (27%), Positives = 17/44 (38%), Gaps = 3/44 (6%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
P + Y C Y H+G+ R + D+L R LR
Sbjct: 41 KPKK-KFYACSMLPYPSGKLHMGHVRNYTINDMLARYLRMNGHN 83
>gi|254780802|ref|YP_003065215.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254040479|gb|ACT57275.1| leucyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 869
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ R +R
Sbjct: 49 IHMGHLRNYVIGDVVARFMRASGY 72
>gi|91775274|ref|YP_545030.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|91775418|ref|YP_545174.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|123451971|sp|Q1H2F4|SYM_METFK RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|91709261|gb|ABE49189.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
gi|91709405|gb|ABE49333.1| methionyl-tRNA synthetase [Methylobacillus flagellatus KT]
Length = 692
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 17/148 (11%), Positives = 40/148 (27%), Gaps = 18/148 (12%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ + D+ R + V YV DD I+ RA +E +
Sbjct: 30 GSIHLGHMVEYVQSDIWVRFQKMQG--HTVHYVC----ADDTHGTPIMLRAEKEGIT--- 80
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG--HAYEANN 150
+ + + D + + + ++ I + A
Sbjct: 81 ---PEELIRRVHAEHYADFSDFLVAFDNYYSTNSEENRELASQIYRALKANGKIATRTIE 137
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + F + + + +
Sbjct: 138 QYYDPVKHMFLPDRFIKGECPKCHAKDQ 165
>gi|254190924|ref|ZP_04897430.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254259088|ref|ZP_04950142.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|189083243|sp|Q3JNN1|SYL_BURP1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|157938598|gb|EDO94268.1| leucyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|254217777|gb|EET07161.1| leucine--tRNA ligase [Burkholderia pseudomallei 1710a]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|134280305|ref|ZP_01767016.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|237813817|ref|YP_002898268.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|254180643|ref|ZP_04887241.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|134248312|gb|EBA48395.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|184211182|gb|EDU08225.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|237505604|gb|ACQ97922.1| leucine--tRNA ligase [Burkholderia pseudomallei MSHR346]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|58697671|ref|ZP_00372842.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58535824|gb|EAL59640.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
Length = 221
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
PT HIG+AR + DVL LL+ VT
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGY--KVT 161
>gi|167721227|ref|ZP_02404463.1| leucyl-tRNA synthetase [Burkholderia pseudomallei DM98]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|124506505|ref|XP_001351850.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
gi|23504876|emb|CAD51657.1| conserved Plasmodium protein, unknown function [Plasmodium
falciparum 3D7]
Length = 986
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 29/292 (9%), Positives = 72/292 (24%), Gaps = 14/292 (4%)
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSS 158
+ T+ + L T P + N +A + +
Sbjct: 462 LIQAYTKSSQHMDSFFNKLCHTIYIFIITKYPFLQEKRINNNYEENAKGDIENDYMENNC 521
Query: 159 IPNYGSFSR--RKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWH 216
+ N ++ +K + + K + +
Sbjct: 522 VDNKYIDNKYIHNNCVDNKYIHNNCVDNKYIHNNCVDNKYIHNNCVDNKYIHNNCVDNKY 581
Query: 217 IECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGR 276
I + + + Y IH +D + H+ + + ++ N + +
Sbjct: 582 IHNNCVDNKY------IHNNCVDNKYIHNNCVDNKYIHNNCVDNIYNAHHYQYNKYMNYL 635
Query: 277 KMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSK 336
+ K + L+ K + ++ + R DF + K
Sbjct: 636 HILKQHKQCDLSYNTLDDKNSKQAEL------IFYVIYNKRNHNDFLDKSKNNFIEKKIK 689
Query: 337 WPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
+ + N+ N + ++ KN ++L N
Sbjct: 690 DHIHLNHDEKNEDTTGNKKNNNTNDSLECSSKYEHNDIINKNTNILVQNNTM 741
>gi|126440306|ref|YP_001060426.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|167817415|ref|ZP_02449095.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 91]
gi|167825822|ref|ZP_02457293.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 9]
gi|167847306|ref|ZP_02472814.1| leucyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|167895893|ref|ZP_02483295.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|167912541|ref|ZP_02499632.1| leucyl-tRNA synthetase [Burkholderia pseudomallei 112]
gi|167920495|ref|ZP_02507586.1| leucyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|226196835|ref|ZP_03792414.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|166230619|sp|A3NDK5|SYL_BURP6 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|126219799|gb|ABN83305.1| leucine--tRNA ligase [Burkholderia pseudomallei 668]
gi|225931095|gb|EEH27103.1| leucine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|256842391|ref|ZP_05547894.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
gi|256735998|gb|EEU49329.1| methionyl-tRNA synthetase [Parabacteroides sp. D13]
Length = 679
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRKWILEDHKEWKPNVYGQC 222
>gi|154509318|ref|ZP_02044960.1| hypothetical protein ACTODO_01843 [Actinomyces odontolyticus ATCC
17982]
gi|153798952|gb|EDN81372.1| hypothetical protein ACTODO_01843 [Actinomyces odontolyticus ATCC
17982]
Length = 903
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 15/45 (33%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV HIG+ DV+ R R K V Y DD
Sbjct: 54 PTVSGSLHIGHVFSYTHTDVVARYQRMTG--KSVFYPMG---WDD 93
>gi|74005445|ref|XP_536058.2| PREDICTED: similar to ATP-binding cassette, sub-family A, member 12
(ATP-binding cassette transporter 12) (ATP-binding
cassette 12) isoform 1 [Canis familiaris]
Length = 2594
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 32/156 (20%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F +
Sbjct: 1703 NFTDRDDKILTRGERLGGFDLLLKKIMAIL---IKRFHHTRRNWKGIIAQVILPIVFVTT 1759
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + S
Sbjct: 1760 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANSHPSTQGLVSAMWNFPGIDNMCLNI 1819
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
W + CS
Sbjct: 1820 SDPRCLKKGSLEKWNTSGEPVTNFGVCSCSENIQEC 1855
>gi|74005443|ref|XP_862998.1| PREDICTED: similar to ATP-binding cassette, sub-family A, member 12
isoform b isoform 3 [Canis familiaris]
Length = 2287
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 32/156 (20%), Gaps = 3/156 (1%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F +
Sbjct: 1396 NFTDRDDKILTRGERLGGFDLLLKKIMAIL---IKRFHHTRRNWKGIIAQVILPIVFVTT 1452
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + S
Sbjct: 1453 AMGLGTLRNSSNSYPEIQISPSLYGTSEQTAFYANSHPSTQGLVSAMWNFPGIDNMCLNI 1512
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
W + CS
Sbjct: 1513 SDPRCLKKGSLEKWNTSGEPVTNFGVCSCSENIQEC 1548
>gi|262384701|ref|ZP_06077834.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
gi|262293682|gb|EEY81617.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_33B]
Length = 679
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRKWILEDHKEWKPNVYGQC 222
>gi|197336022|ref|YP_002156576.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
gi|226710937|sp|B5FG53|SYM_VIBFM RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|197317512|gb|ACH66959.1| methionyl-tRNA synthetase [Vibrio fischeri MJ11]
Length = 686
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 45/426 (10%), Positives = 107/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R + V ++ DD I+ +A+Q S
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGND--VNFIC----ADDAHGTPIMLKAQQMGISPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + ++ ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWGR 210
+FD + + + + +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKAEEQYGDNCDNCGETYSPTDLINPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQTETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L ++ + + Y + +
Sbjct: 247 TNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
+ + P G + + + A L+ L E + +
Sbjct: 306 ---PAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFAEPELYNEFI 422
Query: 428 --ADYI 431
AD I
Sbjct: 423 AAADRI 428
>gi|153005309|ref|YP_001379634.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152028882|gb|ABS26650.1| methionyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 694
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 37/150 (24%), Gaps = 22/150 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI------ 90
H+G+ I DV R R VTYV A H +
Sbjct: 16 GSIHLGHLVEYIQTDVYVRYRRACG--DHVTYV------------CAADSHGTPIEVNAA 61
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEAN 149
K + D R T+ + + + + G Y+ +
Sbjct: 62 KAGMTPKAFVEKYRGEQHDDFRRFGVEFSTYYTTDSPENARWAYRIYDALKAKGLIYKRS 121
Query: 150 -NEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
++ + F + + +
Sbjct: 122 IEQLYCEHDRRFLPDRFVKGTCPKCGARDQ 151
>gi|320450854|ref|YP_004202950.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
gi|320151023|gb|ADW22401.1| methionyl-tRNA synthetase [Thermus scotoductus SA-01]
Length = 627
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/30 (30%), Positives = 13/30 (43%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
V H+G+A +V D L R R +
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGYQT 43
>gi|167564099|ref|ZP_02357015.1| leucyl-tRNA synthetase [Burkholderia oklahomensis EO147]
gi|167571241|ref|ZP_02364115.1| leucyl-tRNA synthetase [Burkholderia oklahomensis C6786]
Length = 864
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 13/25 (52%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DV+YR LR
Sbjct: 49 HMGHVRNYTINDVMYRYLRMNGYNT 73
>gi|164663379|ref|XP_001732811.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
gi|159106714|gb|EDP45597.1| hypothetical protein MGL_0586 [Malassezia globosa CBS 7966]
Length = 532
Score = 39.7 bits (91), Expect = 1.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%), Gaps = 2/30 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRL--LRYYYG 62
V HIG+ ++ DVL R LRY
Sbjct: 14 VNAEPHIGHLHSSVMADVLRRYAELRYRGW 43
>gi|124023208|ref|YP_001017515.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
gi|166231629|sp|A2C9U0|SYL_PROM3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|123963494|gb|ABM78250.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9303]
Length = 878
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 63 HMGHVRNYVITDVIARVQRMRG--DAVLHPMG---WD------AFGLPAENAAIARNVDP 111
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 112 GDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYR 148
>gi|15921521|ref|NP_377190.1| arginyl-tRNA synthetase [Sulfolobus tokodaii str. 7]
gi|23822200|sp|Q971X1|SYR_SULTO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|15622307|dbj|BAB66299.1| 623aa long hypothetical arginyl-tRNA synthetase [Sulfolobus
tokodaii str. 7]
Length = 623
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ DV+ R+L+ E + N
Sbjct: 123 HVGHLRNAILGDVIARMLKARGHEVNTRFYVN 154
>gi|51891582|ref|YP_074273.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|60390687|sp|Q67SB4|SYL_SYMTH RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|51855271|dbj|BAD39429.1| leucyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 861
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 20/147 (13%), Positives = 43/147 (29%), Gaps = 11/147 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R + DV+ R R V + D E+ +I ++
Sbjct: 50 HMGHVRNYTIVDVIARYRRMKGY--NVLHPMGF-DS-----FGMPAENAAIQHGANPAVW 101
Query: 100 TSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
T +N + ++ ++ +L G AY+ + +
Sbjct: 102 TRENIAEMTAQLKQMGYSYDWSRAVYTYREDYYRWTQWLFLQFYKKGLAYKKTAPVNWCP 161
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + + + V +K
Sbjct: 162 SCQTVLANEQVEDGRCWRCDSVVTKKD 188
>gi|16332034|ref|NP_442762.1| arginyl-tRNA synthetase [Synechocystis sp. PCC 6803]
gi|2501048|sp|Q55486|SYR_SYNY3 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|1001346|dbj|BAA10833.1| arginyl-tRNA-synthetase [Synechocystis sp. PCC 6803]
Length = 584
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D L R+L + + + +V
Sbjct: 132 MHVGHLRSTIIGDCLARVLEFRGYDVLRLNHV 163
>gi|304320514|ref|YP_003854157.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
gi|303299416|gb|ADM09015.1| leucyl-tRNA synthetase [Parvularcula bermudensis HTCC2503]
Length = 864
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 14/34 (41%), Gaps = 2/34 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R + DVL R R + V +
Sbjct: 47 IHIGHVRNYAMGDVLARYKRAKGYD--VLHPMGF 78
>gi|303236923|ref|ZP_07323502.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
gi|302483091|gb|EFL46107.1| methionine--tRNA ligase [Prevotella disiens FB035-09AN]
Length = 687
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 50/188 (26%), Gaps = 25/188 (13%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V +V IT RA++E +
Sbjct: 23 HIGHLAGVYVPSDIYVRYLRLK--KQEVLFVGGSDEHGVPIT-------LRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + H + + G E +
Sbjct: 72 ----PQEVCDRYHKMIKDSFEEFGISFDVYSRTTSETHHKFASDFFRKLYDEGKLIEKES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPWG 209
E ++D + +K +D + + P
Sbjct: 128 EQLYDEEAKQFLADRYVMGECPHCHNENAYGDQCEKCGSDLSPMELINPHSTISGSKPVV 187
Query: 210 RGRPGWHI 217
+ W++
Sbjct: 188 KTTKNWYL 195
>gi|299538180|ref|ZP_07051465.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
gi|298726382|gb|EFI66972.1| methionyl-tRNA synthetase [Lysinibacillus fusiformis ZC1]
Length = 544
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 38/145 (26%), Gaps = 13/145 (8%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIP--IN 93
H+G+ ++ D+L R R + V YV N T I RA QE+ + N
Sbjct: 17 HLGHVAALLPGDILARYYRQKG--EQVLYVSGSDCNGT----PISIRAAQENTTTEAIAN 70
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH-GHAYEANNEI 152
T A H Q++ AY ++
Sbjct: 71 HYHDEFTRCFHDLGFTYDLYTRTDAEHHHESVKTLFLQLLANNFLYKKKIEQAYCETDKQ 130
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGT 177
+ K +
Sbjct: 131 FLPDRFVEGLCPNCGAKARGDQCDN 155
>gi|226356003|ref|YP_002785743.1| arginyl-tRNA synthetase [Deinococcus deserti VCD115]
Length = 633
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R +++ D + R+ R V +N IDD +A + +I
Sbjct: 145 HVGHLRNVVLGDSMARIFRAAGHTVEV---QNY--IDD-TGRQAAEALFAINHYHREWDG 198
Query: 100 TSKNTQQFVKDTTRLACLA 118
T K + RL
Sbjct: 199 TQKYDHWLGEGYVRLNADP 217
>gi|170747932|ref|YP_001754192.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
gi|170654454|gb|ACB23509.1| methionyl-tRNA synthetase [Methylobacterium radiotolerans JCM 2831]
Length = 525
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 20/162 (12%), Positives = 48/162 (29%), Gaps = 13/162 (8%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A +I D + R R + V + T D+ KI + A + +
Sbjct: 24 GAPHIGHAYEVIAADAIARFHRLDGYD--VLFS---TGTDEHGLKIQQAATRAGTTPRAF 78
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ ++ + +H + + + +G Y
Sbjct: 79 VDGT--AARFQAM---ADRMDCAYDRFIRTTEPDHYAAAQEIWRRMEANGDIYLDKYAGW 133
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+ Y R +++ + + + + L++
Sbjct: 134 YSVRDEAYYDEAETRLLEDGSRRSLATDTPVEWMEEENFLFR 175
>gi|167044145|gb|ABZ08828.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
marine crenarchaeote HF4000_APKG5C13]
Length = 951
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
TV Y + HIG+ R + DV R LR V +
Sbjct: 34 ITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGF--NVLFPMGF 76
>gi|167044058|gb|ABZ08743.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
marine crenarchaeote HF4000_APKG4H17]
Length = 951
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
TV Y + HIG+ R + DV R LR V +
Sbjct: 34 ITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGF--NVLFPMGF 76
>gi|167043876|gb|ABZ08565.1| putative tRNA synthetases class I (I, L, M and V) [uncultured
marine crenarchaeote HF4000_APKG3E18]
Length = 951
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 7/45 (15%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
TV Y + HIG+ R + DV R LR V +
Sbjct: 34 ITVAYPYPNSPQHIGHGRTYTITDVHSRYLRMKGF--NVLFPMGF 76
>gi|67624509|ref|XP_668537.1| methionine -- tRNA ligase [Cryptosporidium hominis TU502]
gi|54659719|gb|EAL38284.1| methionine -- tRNA ligase [Cryptosporidium hominis]
Length = 562
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 15/155 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI--N 93
H+G+A ++ D+L R+ R + T D+ KI A ++ S +
Sbjct: 29 PHMGHAYEIVTSDILVRIARLFGFNTRFQ-----TGTDEHGQKIAATAEKKGISPKELCD 83
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + + N + + + H + + + N
Sbjct: 84 ENVKQFKNMNEKLQISTDRFIRTTDTDHYESCKELWRR-----CEAKGDIYLGKYNGWYN 138
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
S + G + +
Sbjct: 139 VREESFMTELEAKMLNYTDPISGLPLTKMEEPSYF 173
>gi|282880479|ref|ZP_06289186.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
gi|281305582|gb|EFA97635.1| methionine--tRNA ligase [Prevotella timonensis CRIS 5C-B1]
Length = 687
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 40/157 (25%), Gaps = 24/157 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR + V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYARYLRLK--NQEVIFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + K + + H + ++ G E +
Sbjct: 72 ----PQDVVDRYHSMIKKSFEEFGISFDVYSRTTSKTHEQLASDFFKKLLEEGKLQEQES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D + + +
Sbjct: 128 EQYYDEEAHQFLADRYIKGECPHCHYDGAYGDQCEHC 164
>gi|220932862|ref|YP_002509770.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
gi|219994172|gb|ACL70775.1| methionyl-tRNA synthetase [Halothermothrix orenii H 168]
Length = 653
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 19/133 (14%), Positives = 40/133 (30%), Gaps = 13/133 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D L + + +T D+ KI +A +
Sbjct: 17 DRLHIGHAYTTVAADTLAKFKEMQDYDT-----MFLTGSDEHGQKIERKASEAGK--KPG 69
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + I + + + + +H + + + I G Y+ E
Sbjct: 70 EYVDEIVATFKDLWKRLGVDY---DYFIRTTNPDHEKVVQEIFKKIYEKGDIYKGKYEGW 126
Query: 154 FDTSSIPNYGSFS 166
+ T +
Sbjct: 127 YCTPCETFWTERQ 139
>gi|126658249|ref|ZP_01729399.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126620398|gb|EAZ91117.1| leucyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 853
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ RL R V + D A E+ +I N
Sbjct: 49 HMGHVRNYVITDVIARLKRLQGY--RVLHPMG---WD------AFGLPAENAAIDRNIPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T KN Q + L + AT + +L G AY+ +
Sbjct: 98 ADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLAYQKEAAVN 157
Query: 154 FDT 156
+D
Sbjct: 158 WDP 160
>gi|33862987|ref|NP_894547.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9313]
gi|48428527|sp|Q7TV01|SYL_PROMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|33634904|emb|CAE20890.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Prochlorococcus
marinus str. MIT 9313]
Length = 878
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 63 HMGHVRNYVITDVIARVQRMRG--DAVLHPMG---WD------AFGLPAENAAIARNVDP 111
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
T +N Q RL + +AT H
Sbjct: 112 GDWTDQNIAQMRAQLDRLGLSIDWDRQQATCHQDYYR 148
>gi|115524873|ref|YP_781784.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
gi|115518820|gb|ABJ06804.1| methionyl-tRNA synthetase [Rhodopseudomonas palustris BisA53]
Length = 518
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 53/161 (32%), Gaps = 16/161 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D L R R K V + +T D+ K+++ A++E +
Sbjct: 24 PHIGHAYEAIATDALARFQRLDG--KDVFF---LTGTDEHGQKMVQTAQKEGLT------ 72
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N +F + +L H + + ++ +G Y + +
Sbjct: 73 PHDLATRNAGRFREMDDKLNVSYDRFIRTTEEQHHRSSQEIWRRMLKNGDIYLDSYAGWY 132
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
Y + E K+ + +K
Sbjct: 133 SVRDEAYYAEDE-TTVGEDKVRRGPQGSPVEWVEEKSYFFK 172
>gi|322491559|emb|CBZ26831.1| putative methionyl-tRNA synthetase [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 747
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 25/142 (17%), Positives = 46/142 (32%), Gaps = 15/142 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+ ++ DVL R R E +V T D+ K+ E A ++ S
Sbjct: 220 VNASPHIGHVYSTLIVDVLGRYHRVKGEEV---FVM--TGTDEHGQKVAEAAAKQGVS-- 272
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T+ + +F + T + H + + + + G Y
Sbjct: 273 ----PMDFTTSVSSEFKQCFTEMNYDMNYFIRTTNATHEKLVQDIWKKLEAKGDIYLGKY 328
Query: 151 EIIFDTSSIPNYGSFSRRKIDE 172
E + S + + +
Sbjct: 329 EGWYSVSDESFLTAQNVADGVD 350
>gi|225868079|ref|YP_002744027.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
gi|225701355|emb|CAW98405.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus]
Length = 883
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 37/201 (18%), Positives = 68/201 (33%), Gaps = 16/201 (7%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S + G D+IF I QS
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 496
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ +N+ IH + EGRKMSKS GN I +++ET + A +R +
Sbjct: 497 EFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDIIET-------YGADALRWFLSN 549
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + F+ +++ + ++K S + L A + ++
Sbjct: 550 GSAPGQDVRFSYEKMDASWNFINKIWNIS--------RYILMNNEGLTLEQATANVEQVV 601
Query: 373 RESTKNHDLLPIFNASAHILG 393
+ N I + ++G
Sbjct: 602 SGAAGNVTDRWILHNLNEMIG 622
>gi|172039150|ref|YP_001805651.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|226710934|sp|B1WSK6|SYL_CYAA5 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|171700604|gb|ACB53585.1| leucyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
Length = 853
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 26/123 (21%), Positives = 42/123 (34%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ RL R V + D A E+ +I N
Sbjct: 49 HMGHVRNYVITDVIARLKRLQGY--RVLHPMG---WD------AFGLPAENAAIDRNIPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T KN Q + L + AT + +L G AY+ +
Sbjct: 98 ADWTYKNIAQMKQQLQTLGLSIDWDREVATCSPDYYKWTQWLFLQFYQAGLAYQKEAAVN 157
Query: 154 FDT 156
+D
Sbjct: 158 WDP 160
>gi|15965354|ref|NP_385707.1| methionyl-tRNA synthetase [Sinorhizobium meliloti 1021]
gi|307312729|ref|ZP_07592360.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
gi|25009383|sp|Q92PX0|SYM_RHIME RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|15074534|emb|CAC46180.1| Probable methionyl-tRNA synthetase (methionine--tRNA ligase)
[Sinorhizobium meliloti 1021]
gi|306899454|gb|EFN30086.1| methionyl-tRNA synthetase [Sinorhizobium meliloti BL225C]
Length = 516
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R E V + +T D+ K+ + A++E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDGRE--VFF---LTGTDEHGQKMQQTAKKEGIS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ +F L H + + G Y+ + +
Sbjct: 69 PQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|315271275|gb|ACO45989.2| putative Arginine--tRNA ligase (Arginine translase) (Arginyl-tRNA
synthetase) [Deinococcus deserti VCD115]
Length = 609
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 29/79 (36%), Gaps = 6/79 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R +++ D + R+ R V +N IDD +A + +I
Sbjct: 121 HVGHLRNVVLGDSMARIFRAAGHTVEV---QNY--IDD-TGRQAAEALFAINHYHREWDG 174
Query: 100 TSKNTQQFVKDTTRLACLA 118
T K + RL
Sbjct: 175 TQKYDHWLGEGYVRLNADP 193
>gi|328956554|ref|YP_004373940.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
gi|328672878|gb|AEB28924.1| methionine--tRNA ligase [Carnobacterium sp. 17-4]
Length = 674
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 28/144 (19%), Positives = 44/144 (30%), Gaps = 15/144 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGNA I DV+ R R + V Y +T D+ KI +A++ +N
Sbjct: 21 HIGNAYSTIACDVMARYKRMQDFD--VFY---LTGSDEHGQKIENKAQE------LNITP 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + K L H + + + + G Y E +
Sbjct: 70 QKYVDQMAEGMQKLWELLEISNDKFIRTTDPAHEKVVADIFERFLAQGDIYLDEYEGWYS 129
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRV 179
Y I+ G V
Sbjct: 130 VPDETFYTETQLVDIERDDQGNIV 153
>gi|313902248|ref|ZP_07835654.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
gi|313467478|gb|EFR62986.1| methionyl-tRNA synthetase [Thermaerobacter subterraneus DSM 13965]
Length = 689
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 33/179 (18%), Positives = 54/179 (30%), Gaps = 18/179 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D L R R E + +T D+ KI ARQ
Sbjct: 37 DRLHIGHTYTTVAADALARYHRLRGDETWL-----LTGTDEHGQKIERAARQAGKEPL-- 89
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I I Q + + + H ++ + Q + G Y+ E +
Sbjct: 90 EYIDPIVEATRQLWQRLHISY---DDFIRTTEPRHKARVQQIFQRLYDKGDIYKGVYEGL 146
Query: 154 FDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ T+ Y R + E + E Y + PG+ P
Sbjct: 147 YCTACEAYYTEAELLDGGRCPVHETPVERLQEESYFFRLSRYAEPLLEHIERHPGFIQP 205
>gi|325981754|ref|YP_004294156.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
gi|325531273|gb|ADZ25994.1| methionyl-tRNA synthetase [Nitrosomonas sp. AL212]
Length = 701
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 23/160 (14%), Positives = 45/160 (28%), Gaps = 23/160 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + E V YV DD I+ RA +E +
Sbjct: 17 GSIHLGHLVEYIQTDIWVRFQKMRGHE--VYYVC----ADDTHGTPIMLRAEKEGIT--- 67
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++ + + D + + + I +A +
Sbjct: 68 ---PEALIARVHSEHLGDFSGFHIQFDNYYSTHSTETRHFSEDI-------YAKLKAAGL 117
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
I Y + ++ + P+ K D
Sbjct: 118 IAVRGIEQLYDPVKNMFLPDRFVKGECPKCGAKDQYGDSC 157
>gi|190571604|ref|YP_001975962.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|213019007|ref|ZP_03334814.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
gi|238065093|sp|B3CNF3|SYR_WOLPP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|190357876|emb|CAQ55335.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus Pel]
gi|212995116|gb|EEB55757.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Culex
quinquefasciatus JHB]
Length = 566
Score = 39.7 bits (91), Expect = 1.1, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT HIG+AR + DVL LL+ N+T
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGY--------NVT 161
>gi|307317213|ref|ZP_07596654.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
gi|306897301|gb|EFN28046.1| methionyl-tRNA synthetase [Sinorhizobium meliloti AK83]
Length = 516
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R E V + +T D+ K+ + A++E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDGRE--VFF---LTGTDEHGQKMQQTAKKEGIS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ +F L H + + G Y+ + +
Sbjct: 69 PQELAARNSAEFQNMARLLNASNDDFIRTTEQRHHEASQAIWMRMGEAGDLYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|148255487|ref|YP_001240072.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
gi|146407660|gb|ABQ36166.1| methionyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
Length = 722
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I D + R R K V + +T D+ K+++ A+ E +
Sbjct: 226 PHIGHAYEAIATDAIARFARLDG--KDVFF---LTGTDEHGLKMVQTAQNEGLT------ 274
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N +F RL H + + ++ +G Y +
Sbjct: 275 PGELATRNAGRFRDMDERLNVSFDRFIRTTEPAHHKSVQAIWNRMLENGDIYADTYAGWY 334
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 335 SVRDEAYYAEDE 346
>gi|153952342|ref|YP_001397729.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
gi|166232773|sp|A7H2J9|SYR_CAMJD RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|152939788|gb|ABS44529.1| arginyl-tRNA synthetase [Campylobacter jejuni subsp. doylei 269.97]
Length = 530
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + + L RL R+ + Y N
Sbjct: 115 PT--GPLHIGHARGAVFGNTLTRLARHLGYKFDTEYYVN 151
>gi|326484075|gb|EGE08085.1| leucyl-tRNA synthetase [Trichophyton equinum CBS 127.97]
Length = 975
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DVL R R + V + D A E+ +I
Sbjct: 92 HMGHVRVYTISDVLARFKRMKGYD--VLHPMG---WD------AFGLPAENAAIERGIHP 140
Query: 97 SIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
T +N L + L + G AY+A +
Sbjct: 141 EGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVVN 200
Query: 154 FDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + G +V ++ K+ +K
Sbjct: 201 YDPVDKTVLANEQVDSNGCSWRSGAKVEKRELKQWFFRITAFK 243
>gi|326476475|gb|EGE00485.1| leucyl-tRNA synthetase [Trichophyton tonsurans CBS 112818]
Length = 933
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DVL R R + V + D A E+ +I
Sbjct: 92 HMGHVRVYTISDVLARFKRMKGYD--VLHPMG---WD------AFGLPAENAAIERGIHP 140
Query: 97 SIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
T +N L + L + G AY+A +
Sbjct: 141 EGWTKQNIANMKNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVVN 200
Query: 154 FDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + G +V ++ K+ +K
Sbjct: 201 YDPVDKTVLANEQVDSNGCSWRSGAKVEKRELKQWFFRITAFK 243
>gi|311064999|ref|YP_003971725.1| valyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
gi|310867319|gb|ADP36688.1| ValS Valyl-tRNA synthetase [Bifidobacterium bifidum PRL2010]
Length = 913
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ DV+ R R + V Y
Sbjct: 59 PTVSGHLHVGHVFSYTHTDVIARFKRMQGYD--VFY 92
>gi|289548074|ref|YP_003473062.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181691|gb|ADC88935.1| arginyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 551
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DV+ RLL + +
Sbjct: 121 PT--GPLHLGHGRIAVVGDVIARLLTAFGFD 149
>gi|218883935|ref|YP_002428317.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
gi|218765551|gb|ACL10950.1| leucyl-tRNA synthetase [Desulfurococcus kamchatkensis 1221n]
Length = 971
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
Query: 33 PTV---YDFA--HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
TV Y A HIG+ R + D++ R R V Y
Sbjct: 40 ITVPYPYSNAPLHIGHGRTYTIGDIIARYKRLKGY--NVLY 78
>gi|254457523|ref|ZP_05070951.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
gi|207086315|gb|EDZ63599.1| arginyl-tRNA synthetase [Campylobacterales bacterium GD 1]
Length = 523
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D LY+L ++ + Y N
Sbjct: 106 PT--GPLHIGHARGAVYGDTLYKLAKHLGYDITAEYYVN 142
>gi|126649241|ref|XP_001388293.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
gi|126117131|gb|EAZ51231.1| RIKEN cDNA 2610011N19 gen [Cryptosporidium parvum Iowa II]
Length = 616
Score = 39.7 bits (91), Expect = 1.2, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D R+L Y E V +V
Sbjct: 147 MHVGHLRSTIIGDTTCRILEYLGFEVLRVNHV 178
>gi|325523984|gb|EGD02180.1| methionyl-tRNA synthetase [Burkholderia sp. TJI49]
Length = 718
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIERVWTEHKRDFDSFGVSFDNFYSTDSEENRVLSEKIYLALKENGLIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 187
>gi|307595974|ref|YP_003902291.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
gi|307551175|gb|ADN51240.1| methionyl-tRNA synthetase [Vulcanisaeta distributa DSM 14429]
Length = 584
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 16/163 (9%), Positives = 39/163 (23%), Gaps = 20/163 (12%)
Query: 36 YDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP--- 91
Y H+GN ++ DV R LR V +V + + I
Sbjct: 27 YAVPHLGNLIGSVLSADVFTRYLRLRG--DDVVFVSG-----------SDEHGTPIEVEA 73
Query: 92 --INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEA 148
+ +T + + + + + H + + +G+ +
Sbjct: 74 LQLGVKPRELTDRMHEIVKRLFELWEISFDNYTRTESPVHREFVKEFFLKLYRNGYVFTR 133
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+E+ + + +
Sbjct: 134 EDEVPYCPKDRIYLPDRFIIGTCPYCGYDKARGDQCENCGRLL 176
>gi|304313810|ref|YP_003848957.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
Marburg]
gi|302587269|gb|ADL57644.1| arginyl-tRNA synthetase [Methanothermobacter marburgensis str.
Marburg]
Length = 560
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+LR + Y N
Sbjct: 129 HIGHIRNAIIGDSLARILRKAGYQVETQYYVN 160
>gi|77548346|gb|ABA91143.1| Staphylococcal nucleaseue family protein, expressed [Oryza sativa
Japonica Group]
gi|125575943|gb|EAZ17165.1| hypothetical protein OsJ_32671 [Oryza sativa Japonica Group]
Length = 368
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235
>gi|326407589|gb|ADZ64660.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis CV56]
Length = 483
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 42/377 (11%), Positives = 94/377 (24%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G+ + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLFARHHGGDFIIR----IEDTDRERHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILH 142
E+ + + + L + + ++
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAK 118
Query: 143 GHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI----LWK 195
A D S + RK + R+ + I +
Sbjct: 119 QEAAGIAPHYINEYADMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIVKGDIEF 178
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ W G P ++ + H +
Sbjct: 179 EGKNIGGDWVIQKRDGYPTYNFAVVVDDHD--------MQISHVIRGDDHIANTPKQLVV 230
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ L + K + + +E + + + + I + +
Sbjct: 231 YDALGWEAPQFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMSDAIFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L L N+ + + +L +
Sbjct: 289 WNPGGEKEIFSREELIELFDEHRLSKSPAA-FDQKKLDWLDNEYIKNADFAKVFELTKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
+ + +
Sbjct: 348 LVAANRFDERAEELVKL 364
>gi|327310210|ref|YP_004337107.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
gi|326946689|gb|AEA11795.1| methionyl-tRNA synthetase [Thermoproteus uzoniensis 768-20]
Length = 568
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 24/165 (14%), Positives = 43/165 (26%), Gaps = 18/165 (10%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKIIERARQEH 87
P V H+GN ++ DV R LR E V +V T I E
Sbjct: 11 PYVQSVPHLGNMIGSVLSADVYARYLRLRGHE--VVFVSGSDMHGTPI----------EV 58
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAY 146
+I + + + R + HI + I +G+ +
Sbjct: 59 EAIQLGVDPQDYAMRMHGIVAELFRRWNISFDLYTHTHSNTHIEFTKDFFKKIYENGYVF 118
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+E+ + + R ++
Sbjct: 119 TQEDELPYCPNDKIFLPDRFVIGKCPYCGYERARGDQCERCGRLL 163
>gi|42520278|ref|NP_966193.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|81652693|sp|Q73HY6|SYR_WOLPM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|42410016|gb|AAS14127.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 568
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
PT HIG+AR + DVL LL+ VT
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGY--KVT 161
>gi|307610691|emb|CBX00298.1| hypothetical protein LPW_20241 [Legionella pneumophila 130b]
Length = 519
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 17/173 (9%), Positives = 36/173 (20%), Gaps = 19/173 (10%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIER-----ARQE 86
PT H+G+ P + D+L R LR II +
Sbjct: 14 PTPNGRLHLGHIGGPFLSADILARYLRTRGHSAW-------------IISGTDSFESYAA 60
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + + + +D + + + I +
Sbjct: 61 GKAEEEHRSPEETCNYYHPLIEEDLRLMGIQMDLFINPLKAPWKYLYQHWHHNIYNQLIN 120
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
+I + + +K + R
Sbjct: 121 NGTTLVIKEKFPWDENNQRYLSGYWLKGDCPICRKKTASYFCENCGAHFRPEE 173
>gi|219851348|ref|YP_002465780.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
gi|219545607|gb|ACL16057.1| leucyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
Length = 926
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 7/41 (17%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
TV Y + H+G+ R +V DV+ R R K V Y
Sbjct: 33 ITVAYPYPSGAMHVGHGRTYMVPDVIARFWRMRG--KQVLY 71
>gi|218248716|ref|YP_002374087.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|257061779|ref|YP_003139667.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|218169194|gb|ACK67931.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|256591945|gb|ACV02832.1| methionyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 535
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 47/320 (14%), Positives = 81/320 (25%), Gaps = 59/320 (18%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP--- 88
V D HIG+A ++ DV+ R R V IT D+ KI A +
Sbjct: 20 VNDVPHIGSAYTTMIADVIARFKRLQG--SSVLL---ITGTDEHGQKIERTAEAKGLEPQ 74
Query: 89 ------------------------SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
S I + Q+ +
Sbjct: 75 EHCDRIVESFESLWQKLNIQYDRFSRTTAKNHGAIVKEFFQRVWEQGDIYLAQQQGWYCV 134
Query: 125 ATNHIPQ----MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
+ + + + A + E F S + + + +
Sbjct: 135 PCEEFKEKRELLEDGCCPLHPNKKAEWRDEENYFFRLSNYQEKLETLYQEHPEFIEPESR 194
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWG----RGRPGWHIECSAMSSHYLGK------- 229
+ + + + W P W + L
Sbjct: 195 RNEVISFVSGGLQDFSISRVNVAWGFPVPGDDNHTIYVWFDALLGYITALLEPDQEAGLE 254
Query: 230 -------VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
++H G D++ H A A +GFL +G+KMSKS
Sbjct: 255 NALSQWWPINLHLIGKDILRFHAVYWPAMLMSA--KLPLPKQIFSHGFLTKDGQKMSKSL 312
Query: 283 GNFITINELLETKKFGGRSW 302
GN + +L+E +
Sbjct: 313 GNTVNPFDLVERYGSDAVRY 332
>gi|241767285|ref|ZP_04765017.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
gi|241362031|gb|EER58179.1| leucyl-tRNA synthetase [Acidovorax delafieldii 2AN]
Length = 897
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 32/206 (15%), Positives = 57/206 (27%), Gaps = 25/206 (12%)
Query: 24 SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
+ + Y C Y H+G+ R + D+L R LR V D
Sbjct: 31 NKKKFYACSMLPYPSGKLHMGHVRNYTINDMLTRYLRMNG--HNVLMPMG---WD----- 80
Query: 82 RAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYL 135
A E+ ++ + T +N K + + AT + +L
Sbjct: 81 -AFGLPAENAALKNGVPPAKWTYENIAYMKKQMQAMGLAIDWSREVATCDPTYYKWNQWL 139
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI--- 192
++ G AY + +D + + G V ++
Sbjct: 140 FLKMLEKGIAYRKTQVVNWDPVDQTVLANEQVIDGKGWRTGATVEKREIPGYYLKITDYA 199
Query: 193 ---LWKRSTPMEPGWESPWGRGRPGW 215
L + PGW + W
Sbjct: 200 EELLGFVTGDKLPGWPERVKLMQENW 225
>gi|228995429|ref|ZP_04155099.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
gi|228764290|gb|EEM13167.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock3-17]
Length = 660
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A + D + R R + V Y +T D+ KI ++A + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGYD--VHY---LTGTDEHGQKIQKKAEELQVT 69
>gi|156973372|ref|YP_001444279.1| chaperone protein HscA [Vibrio harveyi ATCC BAA-1116]
gi|166220446|sp|A7MU49|HSCA_VIBHB RecName: Full=Chaperone protein hscA homolog
gi|156524966|gb|ABU70052.1| hypothetical protein VIBHAR_01059 [Vibrio harveyi ATCC BAA-1116]
Length = 617
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 52/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P V A + Y+ D + +
Sbjct: 431 TAMSVHTVQGEREMVDDCRSLARFSLKGIPPMVAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQAEIQVKPSYGLSDDEVANMLRDSMTY---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G E+ + +++ IE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDELLSDQEKQDLVKVIEALIELRNG-------EDADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|251791232|ref|YP_003005953.1| methionyl-tRNA synthetase [Dickeya zeae Ech1591]
gi|247539853|gb|ACT08474.1| Methionine--tRNA ligase [Dickeya zeae Ech1591]
Length = 486
Score = 39.3 bits (90), Expect = 1.2, Method: Composition-based stats.
Identities = 61/442 (13%), Positives = 110/442 (24%), Gaps = 97/442 (21%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-------KI----- 79
PT H+G+ P + DV+ R LR + V + I+ DD K
Sbjct: 11 PTPNGDLHLGHLSGPFLAADVMQRRLRQQGHD--VIF---ISYSDDYQSYLPRKTHALLR 65
Query: 80 ---------------------IE-----RARQEHPSIPINDAISII-TSKNTQQFVKDTT 112
I +A + + + + + + K
Sbjct: 66 QPFDYGRLMLKAMKLSLELVNINLDLFMQAAENPAYRKAGEHYAALVADQVELKSFKTFY 125
Query: 113 RLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN----NEIIFDTSSIPNYGSFSRR 168
+C ++ H A + + + P + ++
Sbjct: 126 CPSCELYGYEGFGRTHCNWCGTSSDASQCEHCARVPDIEKIEAMTCMSCQGPMTPTQVKQ 185
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG-------------- 214
+ + + P L + + + W RPG
Sbjct: 186 HVWHIGQNYPAVRQALQARPKRACLTRYLDEVLSDEQEQWPITRPGDAGLPVAVLDNYPL 245
Query: 215 --WHIEC-----------------SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W + + + IH G D + H + A
Sbjct: 246 HTWFLGMAGYRASVETYLADHPVRGGFDAWWNPDTELIHFLGFDCSYSHAVGYSSLLL-A 304
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
D +I N FL L+G S S G+ + I +L +PA IRL
Sbjct: 305 DTEGPLPGTFITNRFLKLDGEDFSTSRGHAVWIKDLTG-------QYPADAIRLYCARFA 357
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDP-----AVLSALYNDLNTVSAIQALHK 370
++ + P + D + +T A Q H
Sbjct: 358 PETQVENFSRDDFHRWCQQVFMPLAQQAACQRDAASTLTNEQQQQLREHSTRRAWQ--HA 415
Query: 371 LARESTKNHDLLPIFNASAHIL 392
+ E + AH +
Sbjct: 416 ASIEQFSIAGMADALLGFAHFI 437
>gi|317120932|ref|YP_004100935.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
gi|315590912|gb|ADU50208.1| methionyl-tRNA synthetase [Thermaerobacter marianensis DSM 12885]
Length = 677
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 21/106 (19%), Positives = 34/106 (32%), Gaps = 10/106 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D L R R + +T D+ KI AR+
Sbjct: 22 DRLHIGHTYTTVAADALARYHRLRGDDTWF-----LTGTDEHGQKIERAARKAGKEPL-- 74
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNI 139
+ I I Q + + T +PR + Q+ +
Sbjct: 75 EYIDPIVEATKQLWHRLHISYDDFIRTSEPRHEQRVQQIFQRLYEQ 120
>gi|157164389|ref|YP_001467360.1| hypothetical protein CCC13826_0522 [Campylobacter concisus 13826]
Length = 341
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 13/140 (9%)
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ + + I F + + + I + + +
Sbjct: 22 GYDVFLATFSKTNITNCRNIFFLSNKTVDNRGGNYYYLFYIFKLAKIFNE-IKPNIINAH 80
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
+I + LA++ ++ L + IL + + +NK + +R +
Sbjct: 81 FSYSIGLVSFLAKKISRIKALFSVVCHGDDILNENIFLKIINKT--------ILKRTDAI 132
Query: 421 KMKKFSSADYIRKQLESKGF 440
F+ +D IR ++ S G
Sbjct: 133 ----FAVSDQIRDKILSFGI 148
>gi|150399380|ref|YP_001323147.1| lysyl-tRNA synthetase [Methanococcus vannielii SB]
gi|150012083|gb|ABR54535.1| lysyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 533
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 43/334 (12%), Positives = 88/334 (26%), Gaps = 37/334 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
G T HIGNAR + D +++ L E + +V DD P
Sbjct: 25 GITPSGHIHIGNARETLTADAVHKGLLNNGLESKLIFV-----ADD-----------YDP 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ +T + + + C + A + + + + + + Y AN
Sbjct: 69 LRKLYPFLTQDFEKYIGMPLSEIPCPEGCCESYADHFLKPFLNSLNGLGVELTTYRANEC 128
Query: 152 IIFDTSSIPNYGSFSRR-KIDEQKMGTRVPEKYHKKNPADFILWKRST---------PME 201
+ + R KI E R P + + K E
Sbjct: 129 YKAGMYNEVIIKALENRLKIKEILDSYRKEPLADDWYPLNIVCEKCGKMNQSKVVAYKSE 188
Query: 202 PGWESPWGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
+ + + + I G ++ + H
Sbjct: 189 DKTVTYVCKCGFENTVNPFNGIGKLPWRVDWPARWGIFGVTVEPMGKDHAASGGSYD--T 246
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW----PAPVIRLAML 312
I+ I+ + + + G+ F + W V+R +L
Sbjct: 247 GIKIARQIYEYIAPEKIVYEWIQLKVGDRAMPMSSSAGVVFAVKDWNEICHPEVLRFLIL 306
Query: 313 MTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGI 346
+ IDF ++ ++ + +
Sbjct: 307 RGKPTKHIDFDLKAVSNLVDDYDELERKYFELVE 340
>gi|83945321|ref|ZP_00957669.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
gi|83851155|gb|EAP89012.1| arginyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
Length = 587
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 18/32 (56%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
GP V H+G+ R ++ D L RL+R+ +
Sbjct: 122 GPNVAKPMHVGHLRSSVIGDSLQRLMRFRGHD 153
>gi|157827969|ref|YP_001494211.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165932660|ref|YP_001649449.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
gi|166232835|sp|A8GQM8|SYR_RICRS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|189083544|sp|B0BW17|SYR_RICRO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|157800450|gb|ABV75703.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. 'Sheila Smith']
gi|165907747|gb|ABY72043.1| arginyl-tRNA synthetase [Rickettsia rickettsii str. Iowa]
Length = 576
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSY 155
>gi|300703051|ref|YP_003744653.1| leucyl-tRNA synthetase (leucine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
gi|299070714|emb|CBJ42009.1| Leucyl-tRNA synthetase (Leucine--tRNA ligase) [Ralstonia
solanacearum CFBP2957]
Length = 877
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 13/170 (7%)
Query: 24 SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 37 DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGY--NVLMPMG---WD---AF 88
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
E+ ++ A + T N K + + AT + +L
Sbjct: 89 GMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLK 148
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ G AY + +D + + G V ++
Sbjct: 149 MLEKGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 198
>gi|301109886|ref|XP_002904023.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
gi|262096149|gb|EEY54201.1| methionyl-tRNA synthetase, putative [Phytophthora infestans T30-4]
Length = 727
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 25/164 (15%), Positives = 50/164 (30%), Gaps = 15/164 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
H+G+A + DV+ R + + V + +T D+ KI + A +
Sbjct: 55 PHMGHAYENVCSDVICRY--HRVFGRDVYF---LTGTDEHGQKIAQTAEAAGVT------ 103
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHAYEANNEIIF 154
+ K F + T L ++ + + Q + G Y E +
Sbjct: 104 PQQLVDKYAGIFQQLTKDLNMSNNNFIRTTSDVHKKFAQWLFQQALDKGDVYLGTYEGWY 163
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRST 198
+ + D + T K ++ F + K
Sbjct: 164 NVREEMFVTETEAQLTDYKDPTTGTSFKKMQEQSYFFKMSKYQD 207
>gi|222616493|gb|EEE52625.1| hypothetical protein OsJ_34962 [Oryza sativa Japonica Group]
Length = 377
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 200 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 244
>gi|207721577|ref|YP_002252016.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
[Ralstonia solanacearum MolK2]
gi|206586738|emb|CAQ17323.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
[Ralstonia solanacearum MolK2]
Length = 877
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 13/170 (7%)
Query: 24 SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 37 DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGY--NVLMPMG---WD---AF 88
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
E+ ++ A + T N K + + AT + +L
Sbjct: 89 GMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLK 148
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ G AY + +D + + G V ++
Sbjct: 149 MLEKGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 198
>gi|42560572|ref|NP_975023.1| methionyl-tRNA synthetase [Mycoplasma mycoides subsp. mycoides SC
str. PG1]
gi|42492068|emb|CAE76665.1| Methionine-tRNA ligase [Mycoplasma mycoides subsp. mycoides SC str.
PG1]
gi|301320800|gb|ADK69443.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. mycoides SC
str. Gladysdale]
Length = 509
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 15/155 (9%), Positives = 38/155 (24%), Gaps = 15/155 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS--IPIND 94
H+G+A + D+L R + E +T D+ KI +A++ + + +N
Sbjct: 19 HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEHGQKIENKAKEANLTPLEYLNP 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ T+ + + H+ ++
Sbjct: 74 KVQAFKDLWTKLNIDYDKFIRTTDDYHEKTVQKIFTILLEKGYIYKGQ-----YEGIYCV 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + +
Sbjct: 129 SCEEFLTNEQIDENGLCKISNTKPQLVNENTYFLK 163
>gi|330954065|gb|EGH54325.1| methionyl-tRNA synthetase [Pseudomonas syringae Cit 7]
Length = 499
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 20/170 (11%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R E V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHECVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ +N+ + + N + + + + A
Sbjct: 65 VD------PVELARRNSDRIEVSLAAINIQPDNWMRPHDNAWFADAVGEVFSALRDVGAI 118
Query: 147 EANNEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
E + + Y +F+R + + + + D L
Sbjct: 119 ECRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|295692078|ref|YP_003600688.1| methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
gi|295030184|emb|CBL49663.1| Methionyl-tRNA synthetase [Lactobacillus crispatus ST1]
Length = 658
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMAASYKKLWKSLNISYDKFIRTTDEQHVQAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|182420024|ref|ZP_02951258.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237669576|ref|ZP_04529556.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
BL5262]
gi|182376061|gb|EDT73648.1| methionyl-tRNA synthetase [Clostridium butyricum 5521]
gi|237655020|gb|EEP52580.1| methionine--tRNA ligase [Clostridium butyricum E4 str. BoNT E
BL5262]
Length = 647
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 56/419 (13%), Positives = 102/419 (24%), Gaps = 91/419 (21%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R + V +T D+ KI A ++ +
Sbjct: 23 HIGNTYTTVAADAIARFKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGIT------P 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 72 IEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQDIFKKLYDQGDIYKSSYEGWYC 131
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP---- 207
S + ++ Y K + P + P
Sbjct: 132 TPCESFWTDTQLVNGNCPDCGRPVEKSKEEAYFFKMSKYADRLIKYIEEHPHFIQPESRK 191
Query: 208 ----WGRGRPGWHIECSAMSSHYLGKVF-------------------------------- 231
RPG C + +S G
Sbjct: 192 NEMLNNFLRPGLQDLCVSRTSFDWGVPVTFDEKHVVYVWIDALSNYITALGYGQDNKELY 251
Query: 232 ------DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
D+H G D++ H D +G+L ++G KMSKS GN
Sbjct: 252 DKFWPADVHLIGKDILRFHTIYWPIMLMALD--LPLPKQVFGHGWLLVDGGKMSKSKGNV 309
Query: 286 ITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAE 331
+ L+ + + + + + + + E
Sbjct: 310 VDPVVLVNEFGVDPVRYYLLREIPFGADGLFNNEIFIKKINSDLCNDLGNLLSRTVAMIE 369
Query: 332 ILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
KG D PA + +LN A++ + +L + K D
Sbjct: 370 KYFDGEIPAQAEKGEFDDELINLALSTPAKVEEAVTELNLPLALEHVFELIGRANKYID 428
>gi|83746765|ref|ZP_00943813.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|207744312|ref|YP_002260704.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
[Ralstonia solanacearum IPO1609]
gi|83726534|gb|EAP73664.1| Leucyl-tRNA synthetase [Ralstonia solanacearum UW551]
gi|206595717|emb|CAQ62644.1| leucyl-trna synthetase (leucine--trna ligase) (leurs) protein
[Ralstonia solanacearum IPO1609]
Length = 877
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 48/170 (28%), Gaps = 13/170 (7%)
Query: 24 SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIE 81
+ Y C Y H+G+ R + DV+ R LR V D
Sbjct: 37 DKPKFYACSMLPYPSGKLHMGHVRNYTINDVMTRHLRMKGY--NVLMPMG---WD---AF 88
Query: 82 RARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQN 138
E+ ++ A + T N K + + AT + +L
Sbjct: 89 GMPAENAALNNGVAPAAWTYDNIAYMKKQMQSMGLAIDWSREVATCDPDYYRWNQWLFLK 148
Query: 139 IILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
++ G AY + +D + + G V ++
Sbjct: 149 MLEKGIAYRKTGTVNWDPVDQTVLANEQVIDGRGWRSGAVVEKREIPMYY 198
>gi|332798090|ref|YP_004459589.1| methionyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
gi|332695825|gb|AEE90282.1| Methionyl-tRNA synthetase [Tepidanaerobacter sp. Re1]
Length = 650
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 9/29 (31%), Positives = 13/29 (44%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V HIG+A ++ D L R R +
Sbjct: 15 VNAEPHIGHAYTTVIADFLNRWHRLAGYD 43
>gi|320529744|ref|ZP_08030822.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
gi|320137983|gb|EFW29887.1| methionyl-tRNA synthetase [Selenomonas artemidis F0399]
Length = 514
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 32/263 (12%), Positives = 61/263 (23%), Gaps = 28/263 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A V D + R R + V + +T D+ KI + A +E +
Sbjct: 21 HIGHAYCTTVADTIARFKRLAGYD--VFF---LTGSDEHGQKIQQAAEKEGVT------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA--TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ F + L + +H Q +
Sbjct: 70 QAYVDRIVAGFQELWQLLGISYDDFIRTSEERHHELVQNIFQQIYDQGDIYKGEYKGLYC 129
Query: 155 DTSSIP----NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ + E Y + P + P R
Sbjct: 130 TPCESYWTELQLDENGNCPDCHRPVQEVSEEAYFFRMSKYADRVLAYIKEHPDFIQPVSR 189
Query: 211 -----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+E +S + +++ A + I +
Sbjct: 190 RNEMISFIEQGLEDLCVSRTSFDWGIPVPFDPKHVVYV---WFDALTNYLTPIGYMHDKE 246
Query: 266 IHNGFLNLEGRKMSKSNGNFITI 288
+ + + K F TI
Sbjct: 247 TFRKYWPCDVHLVGKEIVRFHTI 269
>gi|225629915|ref|YP_002726706.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
gi|254782844|sp|C0R573|SYL_WOLWR RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|225591896|gb|ACN94915.1| leucyl-tRNA synthetase [Wolbachia sp. wRi]
Length = 838
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 42/317 (13%), Positives = 84/317 (26%), Gaps = 32/317 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R + DV+ R R E V + I A E+ + N +
Sbjct: 42 IHMGHLRNYAIGDVIARYKRARGFE--VLH---------PIGWDAFGLPAENAARDNNIS 90
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI 152
I T +N + ++ +T + + + HG AY + +
Sbjct: 91 PEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLAYRKESWV 150
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRSTPMEPGWESP 207
+D + + G V ++ + L K ++ W
Sbjct: 151 NWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLK-NWPEK 209
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+ W + + + +V ++ H A C +
Sbjct: 210 VKTMQERWIGKSEGATIEF--EVVGLNKKLKVFTTYPHTLFGASFCAVAAEHPIVQDLKN 267
Query: 268 NGFLN-------LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
+ ++ K + N I + L K I +LM + I
Sbjct: 268 GSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLMEYGEGAI 327
Query: 321 DFTVQRLTEAEILLSKW 337
K+
Sbjct: 328 FGCPAHDQRDFEFAQKY 344
>gi|255554032|ref|XP_002518056.1| methionine-tRNA synthetase, putative [Ricinus communis]
gi|223542652|gb|EEF44189.1| methionine-tRNA synthetase, putative [Ricinus communis]
Length = 678
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 20/136 (14%), Positives = 39/136 (28%), Gaps = 21/136 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 34 PYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA--IYICG-TD----------EYGTATE 80
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ N + I K + +T ++ I + + +
Sbjct: 81 TKAMEENCSPKEICDKYHAIHREVYKWFNISFDEFGRTSTPQQTEVCQAIFKKLLENNWL 140
Query: 145 AYEANNEIIFDTSSIP 160
+ ++ DT
Sbjct: 141 SENTMQQLYCDTCKRF 156
>gi|126650518|ref|ZP_01722741.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
gi|126592674|gb|EAZ86673.1| methionyl-tRNA synthetase [Bacillus sp. B14905]
Length = 544
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 28/168 (16%), Positives = 48/168 (28%), Gaps = 22/168 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA QE N
Sbjct: 17 HLGHVAALLPGDILARYYRQKG--EQVLYVSGSDCNGT----PISIRAAQE------NTT 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQMIYLIQNIILHGHAYEANNEI 152
I + ++F K L R +H +Q + + + +
Sbjct: 65 TEAIANHYHEEFTKCFNELGF-TYDLYTRTDAEHHHESVKGLFLQLLANNFLYKKKIEQA 123
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--ILWKRST 198
+ F R + + D ++ K
Sbjct: 124 YCEADQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKCCK 171
>gi|323137155|ref|ZP_08072234.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
gi|322397513|gb|EFY00036.1| leucyl-tRNA synthetase [Methylocystis sp. ATCC 49242]
Length = 877
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 13/24 (54%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+ R +R +
Sbjct: 50 HMGHVRNYSMGDVIARYMRAKGYD 73
>gi|297159433|gb|ADI09145.1| arginyl-tRNA synthetase [Streptomyces bingchenggensis BCW-1]
Length = 602
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 9/44 (20%)
Query: 32 GPTVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVT 67
G TV D+A H+G+ R ++ D + R+L + EK V
Sbjct: 116 GTTVVDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAG-EKVVR 158
>gi|256371124|ref|YP_003108948.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans
DSM 10331]
gi|256007708|gb|ACU53275.1| aminoacyl-tRNA synthetase class Ia [Acidimicrobium ferrooxidans
DSM 10331]
Length = 855
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV HIG+ D++ R R K V Y
Sbjct: 45 PTVSGTLHIGHVFSYTHADIIARYQRMQG--KEVFY 78
>gi|225630185|ref|YP_002726976.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
gi|225592166|gb|ACN95185.1| arginyl-tRNA synthetase [Wolbachia sp. wRi]
Length = 568
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
PT HIG+AR + DVL LL+ VT
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGY--KVT 161
>gi|156040341|ref|XP_001587157.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980]
gi|154696243|gb|EDN95981.1| hypothetical protein SS1G_12187 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 579
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 28/167 (16%), Positives = 47/167 (28%), Gaps = 15/167 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+ M++ DV R + GE + T D+ KI A Q
Sbjct: 58 VNAAPHVGHLYTMVLADVFKRW-QVLKGETAILC----TGTDEHGMKIQRAAAQAGT--- 109
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
+ F K R +H + Y+ + + YE+ +
Sbjct: 110 ---LPKEFCDNGAETFKKLAQRAGLSNDHFVRTTDQDHKETVEYVWYMLKEREYIYESKH 166
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
E + S Y K + G ++ K
Sbjct: 167 EGWYCVSDETFYPESVIEKRLDPFTGRTFIASQETGKEVEWTSEKNY 213
>gi|48477604|ref|YP_023310.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
gi|74567946|sp|Q6L1N5|SYV_PICTO RecName: Full=Valyl-tRNA synthetase; AltName: Full=Valine--tRNA
ligase; Short=ValRS
gi|48430252|gb|AAT43117.1| valyl-tRNA synthetase [Picrophilus torridus DSM 9790]
Length = 768
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+A D + R +R V Y
Sbjct: 37 PTVSGKMHMGHAYSYPHQDFMARYMRMKGF--SVYY 70
>gi|58699209|ref|ZP_00374017.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534275|gb|EAL58466.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 568
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
PT HIG+AR + DVL LL+ VT
Sbjct: 131 PT--GPLHIGHARGAVFGDVLANLLKKVGY--KVT 161
>gi|238650531|ref|YP_002916383.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
gi|259511656|sp|C4K184|SYR_RICPU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|238624629|gb|ACR47335.1| arginyl-tRNA synthetase [Rickettsia peacockii str. Rustic]
Length = 576
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSY 155
>gi|289582256|ref|YP_003480722.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
gi|289531809|gb|ADD06160.1| methionyl-tRNA synthetase [Natrialba magadii ATCC 43099]
Length = 717
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 44/176 (25%), Gaps = 34/176 (19%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV-----------RNITDID 76
CG Y HIG+ R I D R L E YV N
Sbjct: 21 TCGL-PYANGDLHIGHLRGYIGADAFSRALETLGQETA--YVSGSDMHGTPVAVN----- 72
Query: 77 DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYL 135
A +E S + +Q+ + + + + +
Sbjct: 73 ------AEEEGVS------PEEFAMEWHEQYEETFPKFNVDFDNYGHTHDETNTEFTQEI 120
Query: 136 IQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
++ + G+ YE ++ +D + ++ +
Sbjct: 121 VRTLDDEGYVYEKEIQVAYDPDADQYLPDRYVEGTCPYCGEKARGDECDEGCQRHL 176
>gi|15892018|ref|NP_359732.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
gi|21542254|sp|Q92JH2|SYR_RICCN RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|15619134|gb|AAL02633.1| arginyl-tRNA synthetase [Rickettsia conorii str. Malish 7]
Length = 576
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSY 155
>gi|34580946|ref|ZP_00142426.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
gi|28262331|gb|EAA25835.1| arginyl-tRNA synthetase [Rickettsia sibirica 246]
Length = 576
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLARILQKVSY 155
>gi|242398250|ref|YP_002993674.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
gi|242264643|gb|ACS89325.1| Leucyl-tRNA synthetase [Thermococcus sibiricus MM 739]
Length = 958
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 13/52 (25%), Positives = 20/52 (38%), Gaps = 9/52 (17%)
Query: 18 FQAIDPSNI-RMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ + + Y TV Y H+G+AR + DV+ R R
Sbjct: 21 FEPQMDEKVPKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 69
>gi|47570792|ref|ZP_00241355.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
gi|47552540|gb|EAL11028.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
Length = 183
Score = 39.3 bits (90), Expect = 1.3, Method: Composition-based stats.
Identities = 20/129 (15%), Positives = 38/129 (29%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|256384330|gb|ACU78900.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|256385163|gb|ACU79732.1| methionine--tRNA ligase [Mycoplasma mycoides subsp. capri str.
GM12]
gi|296455562|gb|ADH21797.1| methionine--tRNA ligase [synthetic Mycoplasma mycoides JCVI-syn1.0]
Length = 509
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 39/155 (25%), Gaps = 15/155 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+A + D+L R + E +T D+ KI +A++ + +
Sbjct: 19 HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEHGQKIENKAKEANLTPLEYLNP 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+ K+ + H + + ++ G+ Y +
Sbjct: 74 KVQAFKDLWTKLNINYDKFIRTTDDY-----HEKAVQKIFTILLEKGYIYKGQYEGIYCV 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +
Sbjct: 129 SCEEFLTNEQIDENGLCKISNTKPQLVNEDTYFLK 163
>gi|147766455|emb|CAN73803.1| hypothetical protein VITISV_028905 [Vitis vinifera]
Length = 652
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 40/136 (29%), Gaps = 20/136 (14%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R V Y+ TD + E
Sbjct: 29 PYVNNVPHLGNIIGCVLSADVFARYCRLRGY--NVLYICG-TD----------EYGTATE 75
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHA 145
++ N + I K + + + H + + ++ +
Sbjct: 76 TKAMEENCSPQQICDKYHKIHKEVYDWFDISFDEFGRTSIPQHTEVCQAIFKKLMENNWL 135
Query: 146 YEANNEIIFDTSSIPN 161
E + ++ +
Sbjct: 136 SENRMQQLYCETCQRF 151
>gi|66360370|ref|XP_627239.1| methionyl-tRNA synthetase of possible bacterial origin
[Cryptosporidium parvum Iowa II]
gi|46228842|gb|EAK89712.1| methionyl-tRNA synthetase of possible bacterial origin
[Cryptosporidium parvum Iowa II]
Length = 581
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 18/155 (11%), Positives = 41/155 (26%), Gaps = 15/155 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI--N 93
H+G+A ++ D+L R+ R + T D+ KI A ++ S +
Sbjct: 48 PHMGHAYEIVTSDILVRIARLFGFNTRFQ-----TGTDEHGQKIAATAEKKGISPKELCD 102
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ + + N + + + H + + + N
Sbjct: 103 ENVKQFKNMNEKLQISTDRFIRTTDADHYESCKELWRR-----CEAKGDIYLGKYNGWYN 157
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNP 188
S + G + +
Sbjct: 158 VREESFMTELEAKMLNYTDPISGLPLTKMEEPSYF 192
>gi|298377830|ref|ZP_06987780.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
gi|298265276|gb|EFI06939.1| methionine--tRNA ligase [Bacteroides sp. 3_1_19]
Length = 679
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 27/211 (12%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGITFDIYSRTTSATHHQMASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + ++
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSKPVMRETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLREWILEGHKEWKPNVYGQC 222
>gi|257452653|ref|ZP_05617952.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|317059192|ref|ZP_07923677.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313684868|gb|EFS21703.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
Length = 640
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 31/255 (12%), Positives = 69/255 (27%), Gaps = 25/255 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + V + +T D+ K+ + A+++ +
Sbjct: 13 VNGDPHVGSAYTTIAADVMSRYQKLAGN--NVYF---LTGTDEHGQKVEQTAKEKGFT-- 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANN 150
T K F + L H + +++ + G Y+
Sbjct: 66 ----PQAWTDKMAPAFTEMWKALNIHYSDFIRTTEQRHKDSVKKILKTVYEKGDIYKGEY 121
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + +K+ T E Y + + P +
Sbjct: 122 EGQYCISCETFFPENQIVEPGHCPDCGKKLSTVKEESYFFRMSKYQDALLKHIEEHPDFI 181
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEK 260
P R ++ ++S + I + + +
Sbjct: 182 LPHSRRNEVISFIKQGLQDLSISRNTFSWGIPIEFAPGHITYVWFDALTNYITATGYEND 241
Query: 261 TANIWIHNGFLNLEG 275
+ + +
Sbjct: 242 SEKFDTYWNNARVCH 256
>gi|222475202|ref|YP_002563618.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
gi|222419339|gb|ACM49362.1| arginyl-tRNA synthetase (argS) [Anaplasma marginale str. Florida]
Length = 593
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + DVL LL + + Y N
Sbjct: 152 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN 188
>gi|260800466|ref|XP_002595151.1| hypothetical protein BRAFLDRAFT_118609 [Branchiostoma floridae]
gi|229280393|gb|EEN51162.1| hypothetical protein BRAFLDRAFT_118609 [Branchiostoma floridae]
Length = 25209
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 22/266 (8%), Positives = 62/266 (23%), Gaps = 7/266 (2%)
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
D + + + + +I + +
Sbjct: 12276 DDWKQVCTHLGCDDEFIHKFQDQYKDDVYQSCFHALKTWRDAYDDISYDDKVNKLCQTLR 12335
Query: 154 FDTSSIPNYGSFSRRKIDEQKM-GTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + Y K D++ + +S + + S +
Sbjct: 12336 TCGHDDCADTVLHKYDTENCFALCDHQINIYSHKLADDWVHFCKSLNCDDDFISKIDQEC 12395
Query: 213 PGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLN 272
G + C + + + D +F H + A+ + + L
Sbjct: 12396 GGDNYMCISTALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLC 12455
Query: 273 LEGRKMSKSNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQR 326
+ ++ S + + + KF + + + +R+ D +
Sbjct: 12456 DDTLRLISSKISDWKLVCTTLGCDSFFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDD 12515
Query: 327 LTEAEILLSKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 12516 KVNILCQTLRNCGYTDCAGIVDDKHR 12541
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 26/271 (9%), Positives = 72/271 (26%), Gaps = 11/271 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 10580 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDNISYDDKVNKLCQTLRTCGHDDCADTVLH 10639
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 10640 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 10694
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 10695 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLCDDTLRLIS 10754
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 10755 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 10814
Query: 335 SKWPQTSTSKGIIDPAVLSALYNDLNTVSAI 365
+ + GI+D + L A+
Sbjct: 10815 LRNCGYTDCAGIVDDKHRTECSVVLCDRLAL 10845
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 4024 DEFIHKFQDQYKEDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 4083
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 4084 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 4138
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 4139 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLCDDTLRLIS 4198
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 4199 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNMLCQT 4258
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 4259 LRNCGYTDCAGIVDDKHR 4276
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 3515 DEFIHKFQDQYKEDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 3574
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 3575 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 3629
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 3630 STALKHWRNTMDCSYADKVDLFCHACDVCGFDDVAENCKTNFRHESYGLSLCDDTLRLIS 3689
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 3690 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNMLCQT 3749
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 3750 LRNCGYTDCAGIVDDKHR 3767
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + + + + +
Sbjct: 17669 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDVSYDDKVNKLCQTLRTCGHDDCADTVMY 17728
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 17729 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 17783
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 17784 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLCDDTLRLIS 17843
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 17844 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 17903
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ S GI+D
Sbjct: 17904 LRNCGYSDCAGIVDDKHR 17921
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 5014 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLY 5073
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + ++ + + S + G + C
Sbjct: 5074 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKALNCDDDFISKIDQECGGDNYMCI 5128
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 5129 STALKHWRNTMDCSYADKVDLFCHACDVCGFDDVAENCKTNFRHESYGLSLCDDTLRLIS 5188
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 5189 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNMLCQT 5248
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 5249 LRNCGYTDCAGIVDDKHR 5266
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 67/258 (25%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 13076 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLY 13135
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
+ + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 13136 KHRTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 13190
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 13191 STALKHWRNTMDCSYADKVDLFCHACDACGFHDVAEDCKTNFRHESYGLGLCDDTLRLIS 13250
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D
Sbjct: 13251 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDAAYDDKVNMLCQT 13310
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 13311 LRNCGYTDCAGIVDDKHR 13328
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 18947 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 19006
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 19007 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 19061
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 19062 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLCDDTLRLIS 19121
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 19122 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 19181
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 19182 LRNCGYTDCAGIVDDKHR 19199
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 19734 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 19793
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 19794 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 19848
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 19849 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLSLCDDTLRLIS 19908
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 19909 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 19968
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 19969 LRNCGYTDCAGIVDDKHR 19986
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 67/258 (25%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 5455 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 5514
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 5515 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 5569
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + L + ++
Sbjct: 5570 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESFGLSLCDDTLRLIS 5629
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 5630 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 5689
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 5690 LRNCGYTDCAGIVDDKHR 5707
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 24/258 (9%), Positives = 67/258 (25%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + I + + +
Sbjct: 9810 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDISYDDKVNKLCQTLRTCGHDDCADTVLH 9869
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 9870 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 9924
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + L + ++
Sbjct: 9925 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESFGLSLCDDTLRLIS 9984
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 9985 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 10044
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 10045 LRNCGYTDCAGIVDDKHR 10062
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 23/258 (8%), Positives = 68/258 (26%), Gaps = 11/258 (4%)
Query: 101 SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIP 160
+ +F + H + + + + +
Sbjct: 22336 DEFIHKFQDQYKDDVYQSCFHALKTWRDTFDDVSYDDKVNKLCQTLRTCGHDDCADTVMY 22395
Query: 161 NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECS 220
Y + + + + ++ Y K D++ + +S + + S + G + C
Sbjct: 22396 KYDTENCFALCDHQINI-----YSHKLADDWVHFCKSLNCDDDFISKIDQECGGDNYMCI 22450
Query: 221 AMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSK 280
+ + + D +F H + A+ + + L + ++
Sbjct: 22451 STALKHWRNTMDCSYADKVDLFCHACDACGFDDVAEDCKTNFRHESYGLGLCDDTLRLIS 22510
Query: 281 SNGNFITI------NELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
S + + + KF + + + +R+ D +
Sbjct: 22511 SKISDWKLVCTTLGCDSSFIHKFQDQYHDDTYLSCFHALKTWRDTFDASYDDKVNILCQT 22570
Query: 335 SKWPQTSTSKGIIDPAVL 352
+ + GI+D
Sbjct: 22571 LRNCGYTDCAGIVDDKHR 22588
>gi|146304661|ref|YP_001191977.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
gi|189083262|sp|A4YI01|SYM_METS5 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|145702911|gb|ABP96053.1| methionyl-tRNA synthetase [Metallosphaera sedula DSM 5348]
Length = 568
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 1/38 (2%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV 69
P V H+GN ++ DV R R YG++ V +V
Sbjct: 10 PYVQSVPHLGNLIGSILSADVFARYARLKYGKENVVFV 47
>gi|300784293|ref|YP_003764584.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|299793807|gb|ADJ44182.1| valyl-tRNA synthetase [Amycolatopsis mediterranei U32]
Length = 837
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV HIG+ DVL R R E V Y DD
Sbjct: 52 PTVSGSLHIGHVFSFTHTDVLARFKRMRGLE--VFYPMG---WDD 91
>gi|19745562|ref|NP_606698.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS8232]
gi|25009357|sp|Q8P298|SYM_STRP8 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|19747684|gb|AAL97197.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes
MGAS8232]
Length = 665
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ S
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIS 66
>gi|56807711|ref|ZP_00365584.1| COG0143: Methionyl-tRNA synthetase [Streptococcus pyogenes M49
591]
Length = 666
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ S
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIS 67
>gi|315657010|ref|ZP_07909895.1| valyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
gi|315492402|gb|EFU82008.1| valyl-tRNA synthetase [Mobiluncus curtisii subsp. holmesii ATCC
35242]
Length = 885
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 52 PTVSGSLHVGHVFSYTHTDVVARYQRMRG--KNVFYPMG---WDD 91
>gi|315655136|ref|ZP_07908038.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
gi|315490617|gb|EFU80240.1| valyl-tRNA synthetase [Mobiluncus curtisii ATCC 51333]
Length = 885
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 52 PTVSGSLHVGHVFSYTHTDVVARYQRMRG--KNVFYPMG---WDD 91
>gi|269958746|ref|YP_003328533.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
gi|269848575|gb|ACZ49219.1| arginyl-tRNA synthetase [Anaplasma centrale str. Israel]
Length = 593
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + DVL LL + + Y N
Sbjct: 152 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN 188
>gi|229585107|ref|YP_002843609.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
gi|228020157|gb|ACP55564.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.27]
Length = 631
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 29/277 (10%), Positives = 73/277 (26%), Gaps = 26/277 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 68 PYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSG-----------SDEHGTPIE 116
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + I + + L +
Sbjct: 117 IEAIKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESEIHKKFVREFLLKLTKYVK 176
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 177 VSEDEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 236
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+P + W + S + P + +A ++ ++
Sbjct: 237 APIFKKSKHWFFDLSEFNEKIRS------WISSSNEMPDNVKSVALGWVSEGLKP--RSI 288
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ + + + + E L +
Sbjct: 289 TRDNKWGIPAPFIGAEDKSIYVWFEALLGYISAVIEY 325
>gi|298346576|ref|YP_003719263.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
gi|298236637|gb|ADI67769.1| valine--tRNA ligase [Mobiluncus curtisii ATCC 43063]
Length = 885
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 52 PTVSGSLHVGHVFSYTHTDVVARYQRMRG--KNVFYPMG---WDD 91
>gi|159906015|ref|YP_001549677.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|238686996|sp|A9AAS2|SYR_METM6 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|159887508|gb|ABX02445.1| arginyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 566
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L + Y N
Sbjct: 128 HIGHGRNMVIGDSLKRILIASGYDVETQYYVN 159
>gi|330814121|ref|YP_004358360.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
gi|327487216|gb|AEA81621.1| methionyl-tRNA synthetase [Candidatus Pelagibacter sp. IMCC9063]
Length = 481
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 41/128 (32%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
+G+A I D + R R + V +V T D+ KI + A + S N +
Sbjct: 1 MGHAYSSISADFIARYKRLEGYD--VKFV---TGTDEHGQKIQKSADKRKLSP--NVFCN 53
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I+ + F+ T L H + L + + Y + +
Sbjct: 54 EIS----KVFLDLTKTLNLSNTDFIRTTEDRHHKTVQKLWKILEEKKFIYLSKYSGWYSV 109
Query: 157 SSIPNYGS 164
S Y
Sbjct: 110 SDEAFYTE 117
>gi|209558897|ref|YP_002285369.1| methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
gi|209540098|gb|ACI60674.1| Methionyl-tRNA synthetase [Streptococcus pyogenes NZ131]
Length = 666
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ S
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIS 67
>gi|126695598|ref|YP_001090484.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
gi|166229753|sp|A3PAV8|SYI_PROM0 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
Full=Isoleucine--tRNA ligase; Short=IleRS
gi|126542641|gb|ABO16883.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9301]
Length = 968
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 43/255 (16%), Positives = 78/255 (30%), Gaps = 15/255 (5%)
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ NEI+ + I + + V + + LWK+ W
Sbjct: 498 KKNGNEILLNKEIINHIQELFSEHGADIWWDWDVKNLLPENYAKESDLWKKGKDTMDVWF 557
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
W C S L D++ G D ++ + S + +
Sbjct: 558 DSGS----SWAAVCELRSE--LKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVL 611
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
H L+ GRKMSKS GN + N ++ K ++ A V+RL + Y +
Sbjct: 612 THGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTDPAYGADVLRLWVSSVDYSVDVPIG 671
Query: 324 VQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L + + K T + L + L ++ + +
Sbjct: 672 SNILKQLSDVYRKVRNTARYLLGNIHDYDPKIDSFEIDQLPLLDQWMLGRLVEVTDQISN 731
Query: 378 NHDLLPIFNASAHIL 392
++ F+ IL
Sbjct: 732 AYENYE-FSKFFQIL 745
>gi|83320001|ref|YP_424033.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
gi|83283887|gb|ABC01819.1| methionyl-tRNA synthetase [Mycoplasma capricolum subsp. capricolum
ATCC 27343]
Length = 509
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 39/155 (25%), Gaps = 15/155 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+A + D+L R + E +T D+ KI +A++ + +
Sbjct: 19 HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEHGQKIENKAKEANLTPLEYLNP 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+ K+ + H + + ++ G+ Y +
Sbjct: 74 KVQAFKDLWTKLNIDYDKFIRTTDDY-----HQNTVQKIFTILLEKGYIYKGQYEGIYCV 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +
Sbjct: 129 SCEEFLTNEQVDENGLCKISNTKPQLVNEDTYFLK 163
>gi|56416837|ref|YP_153911.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
gi|255003182|ref|ZP_05278146.1| arginyl-tRNA synthetase [Anaplasma marginale str. Puerto Rico]
gi|255004313|ref|ZP_05279114.1| arginyl-tRNA synthetase [Anaplasma marginale str. Virginia]
gi|81359057|sp|Q5PAM4|SYR_ANAMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|56388069|gb|AAV86656.1| arginyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
Length = 579
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + DVL LL + + Y N
Sbjct: 138 PT--GPLHIGHARGAVFGDVLSNLLAWVGYDVTREYYVN 174
>gi|301059426|ref|ZP_07200347.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
gi|300446462|gb|EFK10306.1| leucine--tRNA ligase [delta proteobacterium NaphS2]
Length = 1011
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 25/184 (13%), Positives = 52/184 (28%), Gaps = 14/184 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+ R + DV+ R + K V + D E+ +I N +
Sbjct: 199 IHIGHVRNYTIGDVVARYKKMCG--KNVLHPMG---WD---AFGMPAENAAIENNTHPAK 250
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEIIFD 155
T +N + R+ + AT + + + G AY + +
Sbjct: 251 WTYENIENMKAQLKRMGFSYDWDRELATCDPDYYRWEQLVFLEMYEKGLAYRKKTHVNWC 310
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGW 215
+ ++++ ++ K + L + G P
Sbjct: 311 EKCQTV---LANEQVEDGCCWRHPEQEVAIKEMNSWFLKITDYAEDMLEYCEKLPGWPDR 367
Query: 216 HIEC 219
+
Sbjct: 368 VLSM 371
>gi|218186278|gb|EEC68705.1| hypothetical protein OsI_37185 [Oryza sativa Indica Group]
Length = 368
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 191 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 235
>gi|158605006|gb|EAT99182.3| putative glycosyl transferase, group 1 [Campylobacter concisus
13826]
Length = 347
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 18/140 (12%), Positives = 44/140 (31%), Gaps = 13/140 (9%)
Query: 301 SWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN 360
+ + + I F + + + I + + +
Sbjct: 28 GYDVFLATFSKTNITNCRNIFFLSNKTVDNRGGNYYYLFYIFKLAKIFNE-IKPNIINAH 86
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILL 420
+I + LA++ ++ L + IL + + +NK + +R +
Sbjct: 87 FSYSIGLVSFLAKKISRIKALFSVVCHGDDILNENIFLKIINKT--------ILKRTDAI 138
Query: 421 KMKKFSSADYIRKQLESKGF 440
F+ +D IR ++ S G
Sbjct: 139 ----FAVSDQIRDKILSFGI 154
>gi|118575544|ref|YP_875287.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
gi|118194065|gb|ABK76983.1| arginyl-tRNA synthetase [Cenarchaeum symbiosum A]
Length = 607
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-TYVRNITDIDD 77
HIG+ R +++ D + R+L + V Y IDD
Sbjct: 115 HIGHVRNIVIGDSVARILSREGYKVSVLNY------IDD 147
>gi|242082536|ref|XP_002441693.1| hypothetical protein SORBIDRAFT_08g000830 [Sorghum bicolor]
gi|241942386|gb|EES15531.1| hypothetical protein SORBIDRAFT_08g000830 [Sorghum bicolor]
Length = 203
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 9/48 (18%), Positives = 21/48 (43%), Gaps = 2/48 (4%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADY-IRKQLESKGF 440
++ + N+ + + ++V ER + + AD +R L G+
Sbjct: 153 VDTADPRESANVPLEVHEMVIERTQARIDRDYQMADALLRS-LNEAGY 199
>gi|222475038|ref|YP_002563453.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
gi|222419174|gb|ACM49197.1| leucyl-tRNA synthetase (leuS) [Anaplasma marginale str. Florida]
Length = 829
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 19/162 (11%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
YV G Y H+G+ R + DV+ R R + V + I A
Sbjct: 34 YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHG--LKVLH---------PIGWDAFGL 82
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ ++ T +N + K + + AT + + +
Sbjct: 83 PAENAALSYGVNPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDYYKHEQAFFLDFL 142
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
G AY + + +D + + G ++ +
Sbjct: 143 QQGLAYRKESWVNWDPVDNTVLANEQVVDGRGWRSGAKIERR 184
>gi|45358589|ref|NP_988146.1| arginyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|74554456|sp|Q6LYG5|SYR_METMP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|44921347|emb|CAF30582.1| Arginyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 566
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L + Y N
Sbjct: 128 HIGHGRNMVIGDSLKRILIASGYDVETQYYVN 159
>gi|312277854|gb|ADQ62511.1| Methionyl-tRNA synthetase MetG [Streptococcus thermophilus ND03]
Length = 667
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +RA + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQRAEEAGITPQEYVDS 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ K+ Q + + H + + + ++ G Y +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDY-----HEKVVAQVFERLLEKGDIYLGEYSGWYSV 128
Query: 157 SSIPNYGS 164
S +
Sbjct: 129 SDEEFFTE 136
>gi|295675816|ref|YP_003604340.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
gi|295435659|gb|ADG14829.1| methionyl-tRNA synthetase [Burkholderia sp. CCGE1002]
Length = 711
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 45/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V YV DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRALRMHGHE--VYYV----GADDTHGTPVMLRAEKEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN---------HIPQMIYLIQNIILHGHA 145
+ + + +D + ++ ++ + + A
Sbjct: 81 -PKQLIDRVWLEHKRDFDSFGISFDNYYSTDSDENRVLSENVYLALKEAGLIDAREIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCGAKDQYGDSCEVCGSTYQPTELVNPY 186
>gi|56416673|ref|YP_153747.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
gi|81821293|sp|Q5PB38|SYL_ANAMM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|56387905|gb|AAV86492.1| leucyl-tRNA synthetase [Anaplasma marginale str. St. Maries]
Length = 829
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 19/162 (11%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
YV G Y H+G+ R + DV+ R R + V + I A
Sbjct: 34 YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHG--LKVLH---------PIGWDAFGL 82
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ ++ T +N + K + + AT + + +
Sbjct: 83 PAENAALSYGVNPAVWTERNIESMRKQLKSIGISYNWDRELATCKEDYYKHEQAFFLDFL 142
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
G AY + + +D + + G ++ +
Sbjct: 143 QQGLAYRKESWVNWDPVDNTVLANEQVVDGRGWRSGAKIERR 184
>gi|55822425|ref|YP_140866.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
gi|55738410|gb|AAV62051.1| methionyl-tRNA synthetase [Streptococcus thermophilus CNRZ1066]
Length = 667
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +RA + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQRAEEAGITPQEYVDS 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ K+ Q + + H + + + ++ G Y +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDY-----HEKVVAQVFERLLEKGDIYLGEYSGWYSV 128
Query: 157 SSIPNYGS 164
S +
Sbjct: 129 SDEEFFTE 136
>gi|55820534|ref|YP_138976.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
gi|55736519|gb|AAV60161.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMG 18311]
Length = 667
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +RA + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQRAEEAGITPQEYVDS 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ K+ Q + + H + + + ++ G Y +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDY-----HEKVVAQVFERLLEKGDIYLGEYSGWYSV 128
Query: 157 SSIPNYGS 164
S +
Sbjct: 129 SDEEFFTE 136
>gi|297618741|ref|YP_003706846.1| lysyl-tRNA synthetase [Methanococcus voltae A3]
gi|297377718|gb|ADI35873.1| lysyl-tRNA synthetase [Methanococcus voltae A3]
Length = 540
Score = 39.3 bits (90), Expect = 1.4, Method: Composition-based stats.
Identities = 48/434 (11%), Positives = 124/434 (28%), Gaps = 62/434 (14%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
G T H+GNAR + D +++ L+ + + +V DD P
Sbjct: 28 GITPSGHIHVGNARETLTADGIHQGLKKAGKKSKLIFV-----ADD-----------YDP 71
Query: 92 INDAISIITSKNTQQF----VKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ +T + T+ + C + ++ + L I + +
Sbjct: 72 LRKLYPFLTEEYTKYIGMPLSEIPCPEGCCNSYAEHFLNPYLNSLKDLGIEITTYRASEC 131
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ D ++I + + + ++ N K G+ S
Sbjct: 132 YKAGMYNDAIIKALDNRLKIKEILDGFRKEPLADDWYPLNVVCEKCGKMINTKILGYNSE 191
Query: 208 -------WGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHH-------ENE 248
+++ + I G + + H +
Sbjct: 192 DKTITYVCSDCGFENNVQPFNGIGKLPWRVDWPARWQIFGVTAEPMGKDHGASGGSYDTG 251
Query: 249 IAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIR 308
+ S + L + + + S+ ++ K ++R
Sbjct: 252 VKISRMVYGYVPPEKMIYEWIQLKVGDKAVPMSSSAG-----VVFAVKDWNEICHPEILR 306
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
++ + + IDF ++ + + + +I+ S+ + N + I+ L
Sbjct: 307 FLLVRSKPSKHIDFDLKGIPNIVDDYDELERKYF--ELIEKQKSSSEELNTNDLDKIR-L 363
Query: 369 HKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKL------VQE------- 415
+++ + + + I+ ++ ++ + L V+E
Sbjct: 364 YEVITTNISEKLPVQVAYKFCSIIAQIAIADNEEIDMERVYDILGRNGYNVEEFTEFDKN 423
Query: 416 RLILLKM--KKFSS 427
RLI K ++
Sbjct: 424 RLIARLEMSKNWAK 437
>gi|331703032|ref|YP_004399719.1| methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
str. 95010]
gi|328801587|emb|CBW53740.1| Methionine tRNA synthetase [Mycoplasma mycoides subsp. capri LC
str. 95010]
Length = 509
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 16/155 (10%), Positives = 39/155 (25%), Gaps = 15/155 (9%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+A + D+L R + E +T D+ KI +A++ + +
Sbjct: 19 HLGHAYTTTLADILNRYKKEQGYETFF-----LTGSDEHGQKIENKAKEANLTPLEYLNP 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEIIF 154
+ K+ + H + + ++ G+ Y +
Sbjct: 74 KVQAFKDLWTKLNIDYDKFIRTTDDY-----HEKAVQRIFTILLEKGYIYKGQYEGIYCV 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ +
Sbjct: 129 SCEEFLTNEQIDENGLCKISNTKPQLVNEDTYFLK 163
>gi|320547307|ref|ZP_08041598.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
gi|320448005|gb|EFW88757.1| methionine--tRNA ligase [Streptococcus equinus ATCC 9812]
Length = 666
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
++ K + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + + + + +P
Sbjct: 136 FTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLVEFFHAHPDFIQP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|297626033|ref|YP_003687796.1| valine--tRNA ligase (ValRS) [Propionibacterium freudenreichii
subsp. shermanii CIRM-BIA1]
gi|296921798|emb|CBL56358.1| Valyl-tRNA synthetase (Valine--tRNA ligase) (ValRS)
[Propionibacterium freudenreichii subsp. shermanii
CIRM-BIA1]
Length = 872
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 67 PTVSGSLHVGHVFSYTHTDVIARYQRMLG--KQVFYPMG---WDD 106
>gi|332652515|ref|ZP_08418260.1| methionine--tRNA ligase [Ruminococcaceae bacterium D16]
gi|332517661|gb|EGJ47264.1| methionine--tRNA ligase [Ruminococcaceae bacterium D16]
Length = 655
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 45/156 (28%), Gaps = 20/156 (12%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D + R R + V + +T D+ KI ++A++ S
Sbjct: 17 DKLHIGHTYCTVATDAMARYKRLCGYD--VLF---LTGTDEHGQKIEDKAKEAGVS---- 67
Query: 94 DAISIITSKN---TQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEAN 149
K + + + H+ + + + + G Y+
Sbjct: 68 --PKEFVDKIVTGERGVLDLWKLMNISNDRFIRTTDDYHVSAIQKIFKKMYEKGDIYKGE 125
Query: 150 --NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ S K + + ++
Sbjct: 126 YVGKYCKPCESFWTESQLVDGKCPDCGREVQDAKEE 161
>gi|320169927|gb|EFW46826.1| hypothetical protein CAOG_04784 [Capsaspora owczarzaki ATCC 30864]
Length = 354
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 11/75 (14%), Positives = 30/75 (40%), Gaps = 8/75 (10%)
Query: 370 KLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKK----F 425
++ + N +L + + + +++ + +++L + R K F
Sbjct: 195 EIETQKQANAELQERLASLGDV---QSSSSKVSEKLDATLKELAESRAETAAAKDSNKRF 251
Query: 426 S-SADYIRKQLESKG 439
D +R+QL++ G
Sbjct: 252 EQEVDRLREQLKTMG 266
>gi|299142102|ref|ZP_07035236.1| methionine--tRNA ligase [Prevotella oris C735]
gi|298576564|gb|EFI48436.1| methionine--tRNA ligase [Prevotella oris C735]
Length = 687
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 22/170 (12%), Positives = 44/170 (25%), Gaps = 24/170 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------LRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + K + + H + + G E +
Sbjct: 72 ----PQDVCDRYHTLIKKSFEDFGISFDVYSRTTSKTHSKLASDFFKKLYDEGKLIEKES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E +D + +K +D + P
Sbjct: 128 EQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPH 177
>gi|212645096|ref|NP_001129797.1| hypothetical protein Y105E8A.20 [Caenorhabditis elegans]
gi|193247911|emb|CAQ76500.1| C. elegans protein Y105E8A.20b, partially confirmed by transcript
evidence [Caenorhabditis elegans]
Length = 524
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 7/129 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A ++ DV +R R + + TD ++ ++
Sbjct: 26 PHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIG-TD-----EHGSKIFQAALAAKSTPKQ 79
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ + +F T L H+ + + I +G+ Y++ + +
Sbjct: 80 FCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSIT 139
Query: 158 SIPNYGSFS 166
Sbjct: 140 DECFIPEED 148
>gi|183602754|ref|ZP_02964117.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219683146|ref|YP_002469529.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|241191480|ref|YP_002968874.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|241196885|ref|YP_002970440.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|183217992|gb|EDT88640.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
HN019]
gi|219620796|gb|ACL28953.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
AD011]
gi|240249872|gb|ACS46812.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
Bl-04]
gi|240251439|gb|ACS48378.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis DSM
10140]
gi|289177605|gb|ADC84851.1| Valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis
BB-12]
gi|295794472|gb|ADG34007.1| valyl-tRNA synthetase [Bifidobacterium animalis subsp. lactis V9]
Length = 930
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 13/31 (41%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PTV H+G+ D++ R R E
Sbjct: 58 PTVSGHLHVGHVFSYTHTDIIARFKRMNGYE 88
>gi|227830547|ref|YP_002832327.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|229579360|ref|YP_002837758.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|229581880|ref|YP_002840279.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|238620010|ref|YP_002914836.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
gi|227456995|gb|ACP35682.1| methionyl-tRNA synthetase [Sulfolobus islandicus L.S.2.15]
gi|228010074|gb|ACP45836.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.G.57.14]
gi|228012596|gb|ACP48357.1| methionyl-tRNA synthetase [Sulfolobus islandicus Y.N.15.51]
gi|238381080|gb|ACR42168.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.16.4]
Length = 631
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 72/277 (25%), Gaps = 26/277 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 68 PYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSG-----------SDEHGTPIE 116
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + + + L +
Sbjct: 117 IEAIKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVK 176
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 177 VSEDEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 236
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+P + W + S + P + +A ++ ++
Sbjct: 237 APIFKKSKHWFFDLSEFNEKIRS------WISSSNEMPDNVKSVALGWVSEGLKP--RSI 288
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ + + + + E L +
Sbjct: 289 TRDNKWGIPAPFIGAEDKSIYVWFEALLGYISAVIEY 325
>gi|58697380|ref|ZP_00372706.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
gi|58536220|gb|EAL59776.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
simulans]
Length = 494
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR + DVL LL+ +
Sbjct: 103 PT--GPLHIGHARGAVFGDVLANLLKKVGYK 131
>gi|253582717|ref|ZP_04859938.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
gi|251835587|gb|EES64127.1| leucine-tRNA ligase [Fusobacterium varium ATCC 27725]
Length = 869
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 25/219 (11%), Positives = 60/219 (27%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V + D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLHPMG---WDSFGLPAENAAIQNGA------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
++ T N + + L + ++ + + G Y+ +
Sbjct: 98 AVWTKSNIENMKRQLKMLGFSYDWEREIASYTPEYYRWNQWIFKRLYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
+ +++ K + + ++ + L + ++ GW
Sbjct: 158 WCPECNTVLANEQVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGHKEIKDGWPEK 217
Query: 208 WGRGRPGW----HIECSAMSSHYLGKVFDIHGGGLDLIF 242
+ W + + G+ + +D I+
Sbjct: 218 VLTMQKNWIGKSYGTEIIFTVEETGEKLPMFTTRIDTIY 256
>gi|237737868|ref|ZP_04568349.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229419748|gb|EEO34795.1| methionyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 641
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 29/279 (10%), Positives = 78/279 (27%), Gaps = 20/279 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R R + +T D+ K+ E A+Q+ +
Sbjct: 14 VNGDPHVGSAYTTIAADVMARYKRTMGYDAYF-----LTGTDEHGQKVEETAKQKGYTPQ 68
Query: 92 INDAISIITSKNTQQFVKD-------TTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
I + + + K + + + + + +
Sbjct: 69 QWTDIM--APRFKEMWAKLGIEYSDFIRTTESRHKEAVKKILKKVYENGDIYKGEYSGKY 126
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+ + N+ +++ K + + ++ + K + P
Sbjct: 127 CVSCETFVPENQIVNGNHCPDCGKELRVVKEESYFFKMSKYQDALLEHIDKHPDFILPRS 186
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DRIEKT 261
++ ++S + I + + + + E
Sbjct: 187 RRNEVVSFIKQGLQDLSISRNTFEWGIPIEFAPGHITYVWFDALTNYLTAVGYENNPEMF 246
Query: 262 ANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGR 300
W + ++L G+ + + + L +K +
Sbjct: 247 DKYWNNAEVMHLLGKDIVRFHAIIWPCMLLSAGEKLPDK 285
>gi|103485609|ref|YP_615170.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
gi|98975686|gb|ABF51837.1| arginyl-tRNA synthetase [Sphingopyxis alaskensis RB2256]
Length = 580
Score = 39.3 bits (90), Expect = 1.5, Method: Composition-based stats.
Identities = 51/338 (15%), Positives = 93/338 (27%), Gaps = 40/338 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD----IDDKIIERARQEHP 88
PT H+G+ R +V D L LL + Y N D +D I+ R+ +
Sbjct: 135 PT--GPMHMGHCRGAVVGDALANLLAFTGHRVIREYYIN--DAGGQVD--ILARSAHQRY 188
Query: 89 SIPINDAISIITS-----KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+ +++ I + + T+ + ++
Sbjct: 189 REALGESLGEIAEGLYPGDYLKPVGEALAADFGGRYAD-APETDWLAIFRARTVAAMMET 247
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI--LWKRSTPM- 200
+ I + K D+ + R + + + K P+
Sbjct: 248 IREDLALLGISHDRFASEADLVAAGKPDDAEAWLRERDLVYDGVLEPPKGEVSKDWEPIA 307
Query: 201 EPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG-------LDLIFPHHENEIAQSC 253
P + S I S Y G H +D+ H + +
Sbjct: 308 LPLFRSTKFGDDQDRPIRKPDGSWTYFGVDLAYHFEKARDADELIDIWGADHAGTVMRIV 367
Query: 254 CADRIEKTANIWIHNGFLNLEG-------RKMSKSNGNFITINELLETKKFGGRSWPAPV 306
A + + KMSK GNF+T+ +++ R V
Sbjct: 368 AAAEALTEGRKRFDVKLVQIVRLLRAGEPVKMSKRAGNFVTLADVI-------REVGKDV 420
Query: 307 IRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
+R ML +DF + EA +
Sbjct: 421 VRFMMLTRKAEASMDFDFATVVEASKDNPVFYVQYAHA 458
>gi|282879053|ref|ZP_06287813.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
gi|281298787|gb|EFA91196.1| methionine--tRNA ligase [Prevotella buccalis ATCC 35310]
Length = 687
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 22/163 (13%), Positives = 40/163 (24%), Gaps = 26/163 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RAR+E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRARKEGVT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + K R T+ H + + E
Sbjct: 72 ----PQDVVDRYHSLIKKSFEEFGIS-FDIYSRTTSEIHHKLASDFFKKLYEEEKLLEQE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
E +D + + +D
Sbjct: 127 TEQYYDEEAHQFLADRYITGECPHCHHEGAYGDQCEHCGSDLS 169
>gi|229003043|ref|ZP_04160900.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
gi|228758201|gb|EEM07389.1| Methionyl-tRNA synthetase [Bacillus mycoides Rock1-4]
Length = 627
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 14/53 (26%), Positives = 24/53 (45%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A + D + R R + V Y +T D+ KI ++A + +
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGYD--VHY---LTGTDEHGQKIQKKAEELQVT 69
>gi|241204713|ref|YP_002975809.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
gi|240858603|gb|ACS56270.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. trifolii
WSM1325]
Length = 516
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 44/132 (33%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+ + AR E +
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--KDVFF---LTGTDEHGQKMQQTARAEGITA----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F T L H + + + +G Y+ + +
Sbjct: 70 -QALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|168023212|ref|XP_001764132.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162684572|gb|EDQ70973.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 640
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 32/186 (17%), Positives = 62/186 (33%), Gaps = 14/186 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A P I D L R R + V + IT D +KI A + +
Sbjct: 97 VNAAPHMGSAYPTIAADALARFQRLQG--RDVNF---ITGTDEHGEKIALAAAAKGRAPK 151
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + ++ + + + ++H + + + G Y+A E
Sbjct: 152 --EHCDAVAAEYQLLWKELGIAY---DKFIRTTDSHHETLVDEFYKRVEAKGDIYQAKYE 206
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRG 211
++ + + R P + ++ F L K P+E S
Sbjct: 207 GLYCVNCEEYKDEDELIEDL-CCPIHRKPCEARNEDNYFFALSKYQQPLEELLSSNPNFV 265
Query: 212 RPGWHI 217
RP + +
Sbjct: 266 RPSFRM 271
>gi|332018089|gb|EGI58703.1| Methionyl-tRNA synthetase, mitochondrial [Acromyrmex echinatior]
Length = 547
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 39/128 (30%), Gaps = 13/128 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ ++ D + R + T T D+ KI +A +P +
Sbjct: 34 PHIGHLYSAVLADAIVRYNNMLGHQTFFT-----TGTDEHGNKI--KAAAATAGVPNLEY 86
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ I+ + + K + + H + + + + GH Y +
Sbjct: 87 CTRISQQFREMCDKFEVDYSR---FIRTTEKQHCDAVYHFWKQLEERGHIYLGKYSGWYC 143
Query: 156 TSSIPNYG 163
S
Sbjct: 144 VSDEAFLC 151
>gi|310689727|pdb|3KFL|A Chain A, Leishmania Major Methionyl-Trna Synthetase In Complex With
Methionyladenylate And Pyrophosphate
Length = 564
Score = 38.9 bits (89), Expect = 1.5, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 54/170 (31%), Gaps = 28/170 (16%)
Query: 10 TLERKITEF--QAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
+++++ F I Y V HIG+ ++ DVL R R E
Sbjct: 21 SMKKQKVFFATTPI-------YY----VNASPHIGHVYSTLIVDVLGRYHRVKGEEV--- 66
Query: 68 YVRNITDIDD---KIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
+V T D+ K+ E A ++ S T+ + +F + +
Sbjct: 67 FVM--TGTDEHGQKVAEAAAKQGVS------PMDFTTSVSSEFKQCFQEMNYDMNYFIRT 118
Query: 125 AT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQ 173
H + + + + G Y E + S + + ++
Sbjct: 119 TNPTHEKLVQDIWKKLAAKGDIYLGKYEGWYSVSDESFLTAQNVADGVDR 168
>gi|296810440|ref|XP_002845558.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
gi|238842946|gb|EEQ32608.1| leucyl-tRNA synthetase [Arthroderma otae CBS 113480]
Length = 980
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 26/163 (15%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DVL R + + V + D A E+ +I
Sbjct: 92 HMGHVRVYTISDVLARYKQMKGYD--VLHPMG---WD------AFGLPAENAAIERGIHP 140
Query: 97 SIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
T +N L A L + G AY+A +
Sbjct: 141 EGWTKQNIANMKDQLKDLGIRFDWDAEVMTCAPEFYKHTQKLFLKLHEKGLAYQAEALVN 200
Query: 154 FDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + G +V ++ K+ +K
Sbjct: 201 YDPVDKTVLANEQVDANGCSWRSGAKVEKRELKQWFFRITAFK 243
>gi|254418324|ref|ZP_05032048.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
gi|196184501|gb|EDX79477.1| leucyl-tRNA synthetase [Brevundimonas sp. BAL3]
Length = 849
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 13/48 (27%), Positives = 20/48 (41%), Gaps = 2/48 (4%)
Query: 18 FQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
F D + YV P H+G+AR ++ DV+ R R +
Sbjct: 23 FVTKDTGRPKYYVLEMFPYPSGNIHMGHARNYVMGDVVARSKRAQGYD 70
>gi|55981267|ref|YP_144564.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
gi|62296622|sp|P23395|SYM_THET8 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|55772680|dbj|BAD71121.1| methionyl-tRNA synthetase [Thermus thermophilus HB8]
Length = 618
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|15639785|ref|NP_219235.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Nichols]
gi|189026023|ref|YP_001933795.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|6094408|sp|O83776|SYM_TREPA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|3323103|gb|AAC65761.1| methionyl-tRNA synthetase (metG) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018598|gb|ACD71216.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum SS14]
gi|291060156|gb|ADD72891.1| methionyl-tRNA synthetase [Treponema pallidum subsp. pallidum str.
Chicago]
Length = 811
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 46/162 (28%), Gaps = 21/162 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEH 87
P V + H+GN + DV R R C +V TD + RA ++
Sbjct: 11 PYVNNVPHLGNLIQGLSADVFARFCRMRGYHTC--FVCG-TDEYGTASE----TRAAEQG 63
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHA 145
S + + + +D + L+ + R T+ H L +++ G
Sbjct: 64 LS------PAQLCAHYHA-LHRDIYQWFDLSFDYFGRTTSDAHTELTQALFRHLDARGFI 116
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E + + R +
Sbjct: 117 SEHESAQAYCLHCARFLADRYLRGTCPHCRNAEARADQCEHC 158
>gi|253743531|gb|EES99896.1| Methionyl-tRNA synthetase [Giardia intestinalis ATCC 50581]
Length = 593
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/132 (16%), Positives = 37/132 (28%), Gaps = 10/132 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+ ++ D L R + E Y+ TD + + + +
Sbjct: 15 VNGKPHIGHVFTTLLADTLRRFRKLQGFEP---YLMTGTD-----EHGQKVQQSAEKMGL 66
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
+ F L P R T H I L + + G Y+ E
Sbjct: 67 QPQQWCDNMAKTFETYFVESFGLCPDAFMRTTMPEHAEMAIKLWKRLCDAGLIYKDKYEG 126
Query: 153 IFDTSSIPNYGS 164
+ +
Sbjct: 127 WYCVADEAFVTE 138
>gi|330963539|gb|EGH63799.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 499
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ + ++N+ + + N + + + A
Sbjct: 65 VDPVV------LANRNSDRIEASLATINIKPDNWMRPHNNPWFAAAVGEVFTALRDAGAI 118
Query: 147 EANNE---IIFDTSSIPNYGS---FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E + D + E L +
Sbjct: 119 EFRDSSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQ 178
Query: 201 EPGWESPWG 209
W++
Sbjct: 179 PSQWKTAHR 187
>gi|325954554|ref|YP_004238214.1| methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
gi|323437172|gb|ADX67636.1| Methionyl-tRNA synthetase [Weeksella virosa DSM 16922]
Length = 678
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/155 (14%), Positives = 39/155 (25%), Gaps = 20/155 (12%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV-----RNITDIDDKIIERARQEHPSIPIN 93
HIG+ + D+ R LR K V ++ I I RA+ E +
Sbjct: 21 HIGHMAGVYVPSDIFARYLRRKG--KDVAFIGGSDEHGI-----PITIRAKNEGVT---- 69
Query: 94 DAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I K + + + H + + + E E
Sbjct: 70 --PQDIVDKYHENIKNTLESFGVTFDVYSRTTSAKHREVAQDFFKTLYQNSKFTEEVTEQ 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+D + R + +K
Sbjct: 128 YYDEEAKEFLADRYIRGECPKCGNPDAYGDQCEKC 162
>gi|315229915|ref|YP_004070351.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
gi|315182943|gb|ADT83128.1| leucyl-tRNA synthetase [Thermococcus barophilus MP]
Length = 958
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 15/52 (28%), Positives = 22/52 (42%), Gaps = 9/52 (17%)
Query: 18 FQA-IDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ ID + + Y TV Y H+G+AR + DV+ R R
Sbjct: 21 FEPKIDRNKPKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 69
>gi|30962531|dbj|BAC76732.1| methionyl-tRNA synthetase (mitochondrial) [Caenorhabditis elegans]
Length = 500
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 17/129 (13%), Positives = 39/129 (30%), Gaps = 7/129 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
HIG+A ++ DV +R R + + TD ++ ++
Sbjct: 2 PHIGHAYTAVLCDVAHRWNRLKHPGAQAQFSIG-TD-----EHGSKIFQAALAAKSTPKQ 55
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDTS 157
+ + +F T L H+ + + I +G+ Y++ + +
Sbjct: 56 FCDRVSSKFSDLFTDLELSHTNFIRTTDPAHLEAVQHFWMKIQDNGYIYKSTYSGYYSIT 115
Query: 158 SIPNYGSFS 166
Sbjct: 116 DECFIPEED 124
>gi|291460472|ref|ZP_06599862.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
F0262]
gi|291416844|gb|EFE90563.1| methionine--tRNA ligase [Oribacterium sp. oral taxon 078 str.
F0262]
Length = 673
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 23/178 (12%), Positives = 45/178 (25%), Gaps = 17/178 (9%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R+ + V + T D+ KI ++AR+
Sbjct: 19 PHIGNTYEIVLADAIARFKRFEGYD--VFFQ---TGTDEHGQKIEQKAREAGMEPGQYVD 73
Query: 96 --ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
+ I + + P H+ + +M
Sbjct: 74 GVVGEIRAIWDLMNTSYDKFMRTTDPYHEKQVQKMFRKMYEKGDIYKG-----VYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESPWG 209
S K + + Y + + P + P
Sbjct: 129 TPCESFWTDSQLVDGKCPDCGRPVERASESSYFFRMSKYADRLMKHIEEHPEFIQPVS 186
>gi|226953520|ref|ZP_03823984.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
gi|226835737|gb|EEH68120.1| methionyl-tRNA synthetase [Acinetobacter sp. ATCC 27244]
Length = 721
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 47 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEA 100
Query: 93 NDA 95
A
Sbjct: 101 QIA 103
>gi|241956714|ref|XP_002421077.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
dubliniensis CD36]
gi|223644420|emb|CAX41234.1| mitochondrial leucyl-tRNA synthetase, putative [Candida
dubliniensis CD36]
Length = 923
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 39/319 (12%), Positives = 86/319 (26%), Gaps = 33/319 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R + DV+ R R V + D A E+ ++ N
Sbjct: 72 HIGHLRVYTISDVVARYKRSKGF--NVIHPMG---WD------AFGLPAENAAVERNINP 120
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
S T N + + + + + G AY EI
Sbjct: 121 SEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEIN 180
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP------MEPGWESP 207
+D + + + + + + + K + P W
Sbjct: 181 WDP-VDNTVLANEQVDAEGRSWRSGAIVEKRNLEQWFIGITKYAKELNYDLKNLPDWPEK 239
Query: 208 WGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFPHHENEIAQSC----CADRI 258
+ W E + + + + + D +F +A + A R
Sbjct: 240 VKIMQKNWIGESNGVEINIPVNFPGLEHVTVFTSRPDTLFSMQFVALALTHPIVEAASRE 299
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
++ ++ + L + + I + ++ +++ PV ++ +Y
Sbjct: 300 DQELAAFVESAKLIDDPTSKAGYMLKNIKASIPIDVNNKIKKTYDIPVYAAPYVLGNYGH 359
Query: 319 PIDFTVQRLTEAEILLSKW 337
E + K
Sbjct: 360 GAVMGCPGHDERDFEFWKL 378
>gi|86157740|ref|YP_464525.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85774251|gb|ABC81088.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 694
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 32/250 (12%), Positives = 66/250 (26%), Gaps = 38/250 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI------ 90
H+G+ + DV R R V YV A H +
Sbjct: 16 GPIHLGHLVEYVQTDVYVRFRRACG--DDVAYV------------CAADSHGTPIEVNAA 61
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ K + D T+ ++ + Y + + A +A
Sbjct: 62 KVGMTPKAFVEKYRAEQHADFRAFGVEFSTYYTTDSDENRRWAYRVYD------ALKAKG 115
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+ S Y RR + ++ + P+ D +T + P+
Sbjct: 116 LVY-KKSVEQLYCETDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCA 174
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
C + ++ D+ HE A+ +E +
Sbjct: 175 I-------CRSAPVVRASDHAYVNLRKPDVNAVIHEWVNAE----GHLEPAVREQVKGWL 223
Query: 271 LNLEGRKMSK 280
+L+ +++
Sbjct: 224 ADLQDWCITR 233
>gi|78184713|ref|YP_377148.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
gi|78169007|gb|ABB26104.1| methionyl-tRNA synthetase [Synechococcus sp. CC9902]
Length = 514
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 27/170 (15%), Positives = 52/170 (30%), Gaps = 14/170 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+A + D L R R G+ V + IT +D+ KI A + S
Sbjct: 12 VNDKPHLGSAYTTLACDALARFKRLTQGD--VVF---ITGVDEHGQKIQRTAELNNISPI 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I+ + + + + H+ + + + G
Sbjct: 67 --VHCDKISERYQDLW---SRWNISQDRFVRTTNPRHLQLVEQFYERVKASGDIVTGRQT 121
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ Y +D Q + ++ + F L + +E
Sbjct: 122 GWY-CVGCEEYKDDPDDSVDPQCPIHQKTLEWRDEENLFFRLSRYQRDIE 170
>gi|46199235|ref|YP_004902.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
gi|46196860|gb|AAS81275.1| methionyl-tRNA synthetase [Thermus thermophilus HB27]
Length = 618
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|170690694|ref|ZP_02881860.1| Beta-lactamase [Burkholderia graminis C4D1M]
gi|170143943|gb|EDT12105.1| Beta-lactamase [Burkholderia graminis C4D1M]
Length = 315
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 9/38 (23%), Positives = 16/38 (42%), Gaps = 8/38 (21%)
Query: 419 LLKMKKFSSADYIRKQLES--------KGFILEDYKNP 448
+ ++F+ AD IR +LE G + D +
Sbjct: 40 ARQRQQFAKADAIRARLEEIEAQSGGRLGVSIVDTTSG 77
>gi|169829851|ref|YP_001700009.1| methionyl-tRNA synthetase [Lysinibacillus sphaericus C3-41]
gi|168994339|gb|ACA41879.1| Methionyl-tRNA synthetase 2 [Lysinibacillus sphaericus C3-41]
Length = 551
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 30/168 (17%), Positives = 50/168 (29%), Gaps = 22/168 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVR----NITDIDDKIIERARQEHPSIPINDA 95
H+G+ ++ D+L R R + V YV N T I RA QE N
Sbjct: 24 HLGHVAALLPGDILARYYRQKG--EQVLYVSGSDCNGT----PISIRAAQE------NTT 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQMIYLIQNIILHGHAYEANNEI 152
I + ++F K +L R +H +Q + H + +
Sbjct: 72 TEAIANHYHEEFKKCFNKLGF-TYDLYTRTDAEHHHESVKGLFLQLLANHFLYKKKIEQA 130
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--ILWKRST 198
+T F R + + D ++ K
Sbjct: 131 YCETDQQFLPDRFVEGICPNCGAKARGDQCDNCSEILDPLDLIDKSCK 178
>gi|134045611|ref|YP_001097097.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
gi|166232803|sp|A4FXF3|SYR_METM5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|132663236|gb|ABO34882.1| arginyl-tRNA synthetase [Methanococcus maripaludis C5]
Length = 566
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L + Y N
Sbjct: 128 HIGHGRNMVIGDSLKRILIASGYDVETQYYVN 159
>gi|68543|pir||SYTWMT methionine-tRNA ligase (EC 6.1.1.10) - Thermus aquaticus
gi|155136|gb|AAA27510.1| transfer RNA-Met synthetase [Thermus thermophilus]
Length = 616
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|284033605|ref|YP_003383536.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
gi|283812898|gb|ADB34737.1| methionyl-tRNA synthetase [Kribbella flavida DSM 17836]
Length = 585
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 22/109 (20%), Positives = 38/109 (34%), Gaps = 14/109 (12%)
Query: 40 HIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIG+ + DV R R + V V TD + I+ +A +E S
Sbjct: 18 HIGHVSGFGVPADVFSRYQRMAGND--VLMVSG-TD-EHGTPILVQAEREGVS------P 67
Query: 97 SIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGH 144
+ + + V+D L + NH L + + +G+
Sbjct: 68 RELADRYNRMIVEDLHGLGLSYDLFTRTTTGNHYAVAQELFRTVHRNGY 116
>gi|124025701|ref|YP_001014817.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|189083137|sp|A2C242|SYL_PROM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|123960769|gb|ABM75552.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 862
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 41/123 (33%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DVL R R V + D + E+ +I +
Sbjct: 58 HMGHVRNYVITDVLARYKRMKG--LNVLHPMG---WD------SFGLPAENAAIERETSP 106
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
S T KN Q RL + T + Y+ + + AY+ +
Sbjct: 107 STWTDKNISQMKDQLDRLGLSIDWSKEVTTCKEDYYKWTQYIFNQLHKNNLAYQKKATVN 166
Query: 154 FDT 156
+D
Sbjct: 167 WDP 169
>gi|73667116|ref|YP_303132.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
gi|109894989|sp|Q3YRX1|SYR_EHRCJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|72394257|gb|AAZ68534.1| arginyl-tRNA synthetase [Ehrlichia canis str. Jake]
Length = 576
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 13/31 (41%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR I DVL LL +
Sbjct: 134 PT--GPMHIGHARGAIFGDVLANLLTKVGYQ 162
>gi|72160673|ref|YP_288330.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
gi|109895049|sp|Q47TB0|SYR_THEFY RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|71914405|gb|AAZ54307.1| arginyl-tRNA synthetase [Thermobifida fusca YX]
Length = 576
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 15/30 (50%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
P V H+G+ R +V D L R+L +
Sbjct: 122 PNVAKEMHVGHLRTTVVGDALARILEFLGH 151
>gi|281424592|ref|ZP_06255505.1| methionine--tRNA ligase [Prevotella oris F0302]
gi|281401263|gb|EFB32094.1| methionine--tRNA ligase [Prevotella oris F0302]
Length = 687
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 24/171 (14%), Positives = 45/171 (26%), Gaps = 26/171 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------LRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + K R T+ H + + G E
Sbjct: 72 ----PQDVCDRYHTLIKKSFEDFGIS-FDVYSRTTSKIHSKLASDFFKKLYDEGKLIEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+E +D + +K +D + P
Sbjct: 127 SEQYYDEEAHQFLADRYIMGECPHCHNQNAYGDQCEKCGSDLSPMELINPH 177
>gi|225181535|ref|ZP_03734977.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225167783|gb|EEG76592.1| methionyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 652
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 20/154 (12%), Positives = 37/154 (24%), Gaps = 17/154 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG++ + D + R R + +T D+ KI RA++
Sbjct: 17 DKLHIGHSYTTVAADAMARFKRLTGHQAYF-----LTGTDEHGQKIERRAQEAGKE---- 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EANN 150
+ K T L H + + G Y +
Sbjct: 68 --PQEFVDEIVDWIKKLWTVLDISYDDFIRTTEQRHKDSVQKIFTKFYEQGDIYKSKYEG 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + K + +
Sbjct: 126 WYCTPCEAFWTERQVEEGNCPDCKRPVELVAEES 159
>gi|83859968|ref|ZP_00953488.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
gi|83852327|gb|EAP90181.1| valyl-tRNA synthetase [Oceanicaulis alexandrii HTCC2633]
Length = 867
Score = 38.9 bits (89), Expect = 1.6, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R +R + V Y
Sbjct: 46 PTVSGALHVGHVYSYTQADIMARYMRMSG--RNVLY 79
>gi|298293749|ref|YP_003695688.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
gi|296930260|gb|ADH91069.1| leucyl-tRNA synthetase [Starkeya novella DSM 506]
Length = 870
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R ++ DV+ R R
Sbjct: 47 GRIHIGHGRNYVMGDVVARFKRMKGFN 73
>gi|225874400|ref|YP_002755859.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
gi|225794344|gb|ACO34434.1| arginine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
Length = 689
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD 74
AH+G+ R I+ D RLL V +N D
Sbjct: 131 AAHVGHLRNAILGDTFVRLLEAQGFLVGV---QNYID 164
>gi|256378249|ref|YP_003101909.1| methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
gi|255922552|gb|ACU38063.1| Methionine--tRNA ligase [Actinosynnema mirum DSM 43827]
Length = 645
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 15/46 (32%), Positives = 21/46 (45%), Gaps = 6/46 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PT H+G+ P + DVL R LR + R++T DD
Sbjct: 136 PTPNGGLHLGHLAGPYVRADVLVRALRSTGRD-----ARHVTGTDD 176
>gi|87302693|ref|ZP_01085504.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. WH 5701]
gi|87282576|gb|EAQ74534.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. WH 5701]
Length = 883
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 38/123 (30%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R + V + D A E+ +I
Sbjct: 64 HMGHVRNYVITDVIARVQRLRG--RQVLHPMG---WD------AFGLPAENAAIERGVDP 112
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQM-IYLIQNIILHGH--AYEANNEII 153
T N Q RL + AT H + H AY +
Sbjct: 113 GDWTDANIAQMRAQLQRLGLSIDWDREVATCHADYYRWTQWLFLQFHEAGLAYRKEATVN 172
Query: 154 FDT 156
+D
Sbjct: 173 WDP 175
>gi|302552361|ref|ZP_07304703.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
gi|302469979|gb|EFL33072.1| predicted protein [Streptomyces viridochromogenes DSM 40736]
Length = 241
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 10/56 (17%), Positives = 20/56 (35%), Gaps = 7/56 (12%)
Query: 405 ISIAIEKLVQERLILLK-MKKFSSAD---YIRKQLESKGFILEDYKNPDNGQRMTR 456
+ + L++ R K AD +R +L G ++ D + + R
Sbjct: 188 LPEGADALLRARAQARKHEGD---ADDARELRGELLRLGVVVRDEGGRQYWRSVRR 240
>gi|213971606|ref|ZP_03399715.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
gi|301382008|ref|ZP_07230426.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato Max13]
gi|302058349|ref|ZP_07249890.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tomato K40]
gi|213923635|gb|EEB57221.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato T1]
Length = 499
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ + +N+ + + N + + + + A
Sbjct: 65 VDPVV------LAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAKAVGEVFTALRDAGAI 118
Query: 147 EANNE---IIFDTSSIPNYGS---FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E + D + E L +
Sbjct: 119 EFRDSSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQ 178
Query: 201 EPGWESPWG 209
W++
Sbjct: 179 PSQWKTAHR 187
>gi|160943218|ref|ZP_02090454.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
M21/2]
gi|158445457|gb|EDP22460.1| hypothetical protein FAEPRAM212_00704 [Faecalibacterium prausnitzii
M21/2]
Length = 665
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 48/419 (11%), Positives = 95/419 (22%), Gaps = 80/419 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS---- 89
D HIG++ + D L R R + V +T D+ KI ++A +
Sbjct: 18 DKLHIGHSYTTVACDALARFKRMQGYD-----VMFLTGTDEHGQKIQDKAADAGVTPKEY 72
Query: 90 -----------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-- 124
+D K + + H +
Sbjct: 73 VDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIYKGEYIGHYCKPC 132
Query: 125 ----------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+ +A + ++ + S
Sbjct: 133 ESFWTDSQLVDGKCPDCGREVYDAHEEAYFFKTSKYA-DRLLKLYEENPQFIQPESRKNE 191
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
I K G + + W +
Sbjct: 192 MIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYISALGYGNETYHDYDKF 251
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D+H G +++ H A D +G+L + G KMSKS GN +
Sbjct: 252 WPADLHMVGKEILRFHTILWPAMLMALD--LPLPKRVFGHGWLLMNGGKMSKSVGNVVDP 309
Query: 289 NELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
L + + + + + + + + E
Sbjct: 310 VILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGNLLSRTVAMCEKYF 369
Query: 335 SKWPQTSTSKGIIDPAVLSALY----------NDLNTVSAIQALHKLARESTKNHDLLP 383
ID + + + +DL A+ + + + + K D
Sbjct: 370 GGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALMEIFAVIQRANKYIDETA 428
>gi|72383390|ref|YP_292745.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|109895017|sp|Q46HI6|SYR_PROMT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|72003240|gb|AAZ59042.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 607
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D L R+L + E + +V
Sbjct: 153 MHVGHLRSTIIGDSLARILEFRGYEVLRLNHV 184
>gi|331015494|gb|EGH95550.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M302278PT]
Length = 499
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ + +N+ + + N + + + + A
Sbjct: 65 VDPVV------LAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFTALRDAGAI 118
Query: 147 EANNE---IIFDTSSIPNYGS---FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E + D + E L +
Sbjct: 119 EFRDSSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQ 178
Query: 201 EPGWESPWG 209
W++
Sbjct: 179 PSQWKTAHR 187
>gi|311747941|ref|ZP_07721726.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
gi|126574911|gb|EAZ79269.1| methionine--tRNA ligase [Algoriphagus sp. PR1]
Length = 686
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 24/158 (15%), Positives = 42/158 (26%), Gaps = 26/158 (16%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR K V YV IT +A++E +
Sbjct: 23 HIGHLAGCYVPSDIYVRYLRSLG--KDVLYVCGSDEHGVAIT-------IKAKKEGKT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + + H R + H +++ G E +
Sbjct: 72 ----PQQVVDQYHEIMKGSFQEFGIS-FDHYSRTSAKIHHETAQGFFKDLYDKGEFLEQS 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E FD + + +K
Sbjct: 127 TEQYFDEEAGQFLADRYIEGTCPKCGNENAYGDQCEKC 164
>gi|28870142|ref|NP_792761.1| hypothetical protein PSPTO_2964 [Pseudomonas syringae pv. tomato
str. DC3000]
gi|28853388|gb|AAO56456.1| conserved hypothetical protein [Pseudomonas syringae pv. tomato
str. DC3000]
Length = 494
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 23/189 (12%), Positives = 48/189 (25%), Gaps = 24/189 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 6 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 59
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ + +N+ + + N + + + + A
Sbjct: 60 VDPVV------LAHRNSDRIEASLAAINIKPDNWMRPHNNPWFAEAVGEVFTALRDAGAI 113
Query: 147 EANNE---IIFDTSSIPNYGS---FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E + D + E L +
Sbjct: 114 EFRDSSEPYCPDCAVWGYEAFARGQCNYCGAESDASQCENCAQAPDAELMSGLHCKLCQQ 173
Query: 201 EPGWESPWG 209
W++
Sbjct: 174 PSQWKTAHR 182
>gi|77553401|gb|ABA96197.1| nuclease, putative, expressed [Oryza sativa Japonica Group]
gi|215737121|dbj|BAG96050.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 235
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 10/45 (22%), Positives = 21/45 (46%)
Query: 398 KEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ N+ + + +LV R K + + SAD + L+ G+ +
Sbjct: 58 DPRESANVPLEVHELVIARTQARKCRDYQSADALLSSLDEAGYKI 102
>gi|294649485|ref|ZP_06726908.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
gi|292824613|gb|EFF83393.1| methionine--tRNA ligase [Acinetobacter haemolyticus ATCC 19194]
Length = 717
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 47 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEA 100
Query: 93 NDA 95
A
Sbjct: 101 QIA 103
>gi|262373343|ref|ZP_06066622.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
gi|262313368|gb|EEY94453.1| methionyl-tRNA synthetase [Acinetobacter junii SH205]
Length = 685
Score = 38.9 bits (89), Expect = 1.7, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEA 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|171780192|ref|ZP_02921096.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171281540|gb|EDT46975.1| hypothetical protein STRINF_01980 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 667
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 28/181 (15%), Positives = 62/181 (34%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
++ K + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAADVKKLWKMLDISYDKFIRTTDDYHEKVVAEVFEKLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + + + + +P
Sbjct: 136 FTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLVEFFHAHPDFIQP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|88604156|ref|YP_504334.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|88189618|gb|ABD42615.1| leucyl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 924
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 9/25 (36%), Positives = 12/25 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYY 61
H+G+ R IV DV+ R R
Sbjct: 41 GAMHVGHGRTYIVPDVVARFWRMRG 65
>gi|332872632|ref|ZP_08440600.1| methionine--tRNA ligase [Acinetobacter baumannii 6014059]
gi|332739161|gb|EGJ70020.1| methionine--tRNA ligase [Acinetobacter baumannii 6014059]
Length = 690
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 18 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 71
Query: 93 NDA 95
A
Sbjct: 72 QIA 74
>gi|332852118|ref|ZP_08433945.1| methionine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332867516|ref|ZP_08437669.1| methionine--tRNA ligase [Acinetobacter baumannii 6013113]
gi|332729490|gb|EGJ60829.1| methionine--tRNA ligase [Acinetobacter baumannii 6013150]
gi|332733933|gb|EGJ65078.1| methionine--tRNA ligase [Acinetobacter baumannii 6013113]
Length = 690
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 18 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 71
Query: 93 NDA 95
A
Sbjct: 72 QIA 74
>gi|184157057|ref|YP_001845396.1| methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|183208651|gb|ACC56049.1| Methionyl-tRNA synthetase [Acinetobacter baumannii ACICU]
gi|322506956|gb|ADX02410.1| metG [Acinetobacter baumannii 1656-2]
gi|323516823|gb|ADX91204.1| methionyl-tRNA synthetase [Acinetobacter baumannii TCDC-AB0715]
Length = 687
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|72382182|ref|YP_291537.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
gi|72002032|gb|AAZ57834.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL2A]
Length = 516
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 14/170 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G++ I D + R R V + +T +D+ KI A E ++
Sbjct: 14 VNDKPHLGSSYTTIACDAIARFERLNGN--TVLF---LTGVDEHGQKIERTA--ESKNLE 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
IT K + K + + H + ++ Y
Sbjct: 67 PQLHCDEITEKYKYLWDKLNISY---DRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ Y + + ++ + F L K +E
Sbjct: 124 GWY-CVGCEEYKDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIE 172
>gi|300071900|gb|ADJ61300.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
NZ9000]
Length = 483
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 46/378 (12%), Positives = 104/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR VL+ L R++ G+ + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNART-----VLFNYLFARHHGGDFIIR----IEDTDRERHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--QPRATNHIPQMIYLIQNIILH 142
E+ + + + L + + ++
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTPEELEADHAK 118
Query: 143 GHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
A S + RK + R+ + I+ K
Sbjct: 119 QEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIV-KGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + + ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKRDGYPTYNF--AVVVDDHDMQISHVIRGDDHIANTPKQL---VVYN 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + I + +
Sbjct: 233 ALGWEAP---QFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMSDAIFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR- 373
+ + + E L + + + D L + N+ + + +L +
Sbjct: 288 GWNPGGEKEIFSCEELIELFDENRLSKSPAA-FDQKKLDWMDNEYIKNADFAKVFELTKP 346
Query: 374 ---ESTKNHDLLPIFNAS 388
+ + +
Sbjct: 347 FLVAANRFDERAKELVKL 364
>gi|295105205|emb|CBL02749.1| methionyl-tRNA synthetase [Faecalibacterium prausnitzii SL3/3]
Length = 665
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 48/419 (11%), Positives = 95/419 (22%), Gaps = 80/419 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS---- 89
D HIG++ + D L R R + V +T D+ KI ++A +
Sbjct: 18 DKLHIGHSYTTVACDALARFKRMQGYD-----VMFLTGTDEHGQKIQDKAADAGVTPKEY 72
Query: 90 -----------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-- 124
+D K + + H +
Sbjct: 73 VDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIYKGEYIGHYCKPC 132
Query: 125 ----------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+ +A + ++ + S
Sbjct: 133 ESFWTDSQLVDGKCPDCGREVYDAHEEAYFFKTSKYA-DRLLKLYEENPQFIQPESRKNE 191
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
I K G + + W +
Sbjct: 192 MIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYISALGYGNETYHDYDKF 251
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D+H G +++ H A D +G+L + G KMSKS GN +
Sbjct: 252 WPADLHMVGKEILRFHTILWPAMLMALD--LPLPKRVFGHGWLLMNGGKMSKSVGNVVDP 309
Query: 289 NELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILL 334
L + + + + + + + + E
Sbjct: 310 VILCDRYGVDAIRYFLLREIPFGNDGMFTNEALINRINSDLANDLGNLLSRTVAMCEKYF 369
Query: 335 SKWPQTSTSKGIIDPAVLSALY----------NDLNTVSAIQALHKLARESTKNHDLLP 383
ID + + + +DL A+ + + + + K D
Sbjct: 370 GGTVHNVAGTEAIDTELETMVNELTAKVTADMDDLTIPQALMEIFAVIQRANKYIDETA 428
>gi|239501264|ref|ZP_04660574.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB900]
Length = 687
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|193076558|gb|ABO11218.2| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 17978]
Length = 687
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|169634155|ref|YP_001707891.1| methionyl-tRNA synthetase [Acinetobacter baumannii SDF]
gi|169152947|emb|CAP01992.1| methionyl-tRNA synthetase [Acinetobacter baumannii]
Length = 687
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|169797030|ref|YP_001714823.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213156565|ref|YP_002318226.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|215484490|ref|YP_002326725.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
[Acinetobacter baumannii AB307-0294]
gi|260555678|ref|ZP_05827898.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
gi|301347637|ref|ZP_07228378.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB056]
gi|301513326|ref|ZP_07238563.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB058]
gi|301595850|ref|ZP_07240858.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB059]
gi|169149957|emb|CAM87851.1| methionyl-tRNA synthetase [Acinetobacter baumannii AYE]
gi|213055725|gb|ACJ40627.1| methionyl-tRNA synthetase [Acinetobacter baumannii AB0057]
gi|213987234|gb|ACJ57533.1| Methionyl-tRNA synthetase(Methionine--tRNA ligase)(MetRS)
[Acinetobacter baumannii AB307-0294]
gi|260410589|gb|EEX03887.1| methionyl-tRNA synthetase [Acinetobacter baumannii ATCC 19606]
Length = 687
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|124025722|ref|YP_001014838.1| methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|123960790|gb|ABM75573.1| Methionyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 516
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 26/170 (15%), Positives = 49/170 (28%), Gaps = 14/170 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G++ I D + R R V + +T +D+ KI A E ++
Sbjct: 14 VNDKPHLGSSYTTIACDAIARFERLNGN--TVLF---LTGVDEHGQKIERTA--ESKNLE 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
IT K + K + + H + ++ Y
Sbjct: 67 PQLHCDEITEKYKYLWDKLNISY---DRFVRTTSIEHTSLVHQFYSKVLKSDDVYMGRQS 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME 201
+ Y + + ++ + F L K +E
Sbjct: 124 GWY-CVGCEEYKDVEDKDKSPICSIHKKELEWRDEENLFFKLSKYQDQIE 172
>gi|114331896|ref|YP_748118.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
gi|122313375|sp|Q0AES9|SYM_NITEC RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|114308910|gb|ABI60153.1| methionyl-tRNA synthetase [Nitrosomonas eutropha C91]
Length = 701
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 24/216 (11%), Positives = 60/216 (27%), Gaps = 23/216 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + V YV DD I+ RA +E S
Sbjct: 17 GSIHLGHLVEYIQTDIWVRFQKMQG--HTVYYVC----ADDAHGTPIMLRAEREGIS--- 67
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG--HAYEANN 150
+ ++ + ++D T + ++ I + A +
Sbjct: 68 ---PEALIARVYTEHLRDFTGFHIAFDQYYSTHSDETRYYAEDIYQKLKAAGLIAIRSIE 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
++ ++ F + + + + + A ++ +P +
Sbjct: 125 QLYDPVKNLFLPDRFVKGECPKCGAVDQYGDSCEACGAAYTPTELKNPYSAISGATPIRK 184
Query: 211 GRPGWHIE-----CSAMSSHYLGKVFDIHGGGLDLI 241
+ + CS + + + +
Sbjct: 185 ASEHFFFKLSDPRCSDFLRKWTRSGNHLQVEAANKM 220
>gi|305663645|ref|YP_003859933.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
gi|304378214|gb|ADM28053.1| methionyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
Length = 501
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 7/28 (25%), Positives = 12/28 (42%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEK 64
D H+G+A I+ D++ R
Sbjct: 18 DKPHLGHAYTTILADIIARWFYLQGYNT 45
>gi|156062414|ref|XP_001597129.1| hypothetical protein SS1G_01323 [Sclerotinia sclerotiorum 1980]
gi|154696659|gb|EDN96397.1| hypothetical protein SS1G_01323 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1145
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 26/122 (21%), Positives = 46/122 (37%), Gaps = 6/122 (4%)
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
R + + QR+ E E T + + D T I+ L LA
Sbjct: 612 RRQLRNSEQRVAELERQFVNEKDLKTLNKKLIEKRKTVSVLDSQTELMIRQLEVLAGYVE 671
Query: 377 KNHDLLPIFNAS----AHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + + + I + L +++S +IE+L +ER LL+ K + AD R
Sbjct: 672 RAKGSKQPLDIAELEDSAIKEFVQKLDRLKQSMSTSIEQLFEERDELLEEKNQAIAD--R 729
Query: 433 KQ 434
+
Sbjct: 730 DR 731
>gi|302537689|ref|ZP_07290031.1| LOW QUALITY PROTEIN: methionine-tRNA ligase [Streptomyces sp. C]
gi|302446584|gb|EFL18400.1| LOW QUALITY PROTEIN: methionine-tRNA ligase [Streptomyces sp. C]
Length = 281
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 13/86 (15%), Positives = 22/86 (25%), Gaps = 9/86 (10%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
H+G+ P + DVL R LR + V + D + ++
Sbjct: 19 HVGHLAGPYVAADVLARFLRAEG--EPVRFTTGTAD------HASSVHVRALRAGRKPEE 70
Query: 99 ITSKNTQQFVKDTTRLACLAPTHQPR 124
+ D R
Sbjct: 71 VAEGYRAAITSDWLRSGVEFDHIVRP 96
>gi|87201227|ref|YP_498484.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
gi|123749671|sp|Q2G3C3|SYL_NOVAD RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|87136908|gb|ABD27650.1| leucyl-tRNA synthetase [Novosphingobium aromaticivorans DSM
12444]
Length = 848
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DVL R R E
Sbjct: 55 GRIHIGHVRNYTMGDVLARYKRMRGFE 81
>gi|301300536|ref|ZP_07206733.1| GroES-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
gi|300851866|gb|EFK79553.1| GroES-like protein [Lactobacillus salivarius ACS-116-V-Col5a]
Length = 349
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 20/68 (29%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNIT--DIDDKIIERARQEHPSIPIN---DAISIITSKNTQ 105
D++ RLL+ V NI DIDDK +E+ +E S IN +++ ++ T
Sbjct: 172 DLVIRLLKAAG-------VVNIIGIDIDDKKLEKGLEEGCSYVINSAKESLEEKVAEYTN 224
Query: 106 QFVKDTTR 113
D T
Sbjct: 225 GQGVDITM 232
>gi|238927712|ref|ZP_04659472.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
gi|238884428|gb|EEQ48066.1| methionine--tRNA ligase [Selenomonas flueggei ATCC 43531]
Length = 516
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 23/151 (15%), Positives = 41/151 (27%), Gaps = 18/151 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A V D + R R + V + +T D+ KI + A +E +
Sbjct: 21 HIGHAYCTTVADTIARYKRLAGFD--VFF---LTGSDEHGQKIQQAAEKEGIT------P 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNE---I 152
+ F + L H + + Q I G Y+ +
Sbjct: 70 IQYVDRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIYKGEYKGLYC 129
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + + +
Sbjct: 130 TPCESYWTRLQLDENGCCPDCHRPVQEVSEE 160
>gi|116627343|ref|YP_819962.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
gi|116100620|gb|ABJ65766.1| methionyl-tRNA synthetase [Streptococcus thermophilus LMD-9]
Length = 667
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 24/128 (18%), Positives = 43/128 (33%), Gaps = 13/128 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI +RA + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQRAEEAGITPQEYVDS 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ K+ Q + + H + + + ++ G Y +
Sbjct: 74 MAVDVKDLWQLLDISYDKFIRTTDDY-----HEKVVAQVFERLLEKGDIYLGEYSGWYSV 128
Query: 157 SSIPNYGS 164
S +
Sbjct: 129 SDEEFFTE 136
>gi|320100714|ref|YP_004176306.1| leucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
gi|319753066|gb|ADV64824.1| leucyl-tRNA synthetase [Desulfurococcus mucosus DSM 2162]
Length = 966
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 17/41 (41%), Gaps = 7/41 (17%)
Query: 33 PTV---YDFA--HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
TV Y A HIG+ R + D++ R R V Y
Sbjct: 40 ITVPYPYSNAPLHIGHGRTYTMGDIVARYKRLKGF--NVLY 78
>gi|167737601|ref|ZP_02410375.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 14]
Length = 725
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|120405753|ref|YP_955582.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
gi|119958571|gb|ABM15576.1| methionyl-tRNA synthetase [Mycobacterium vanbaalenii PYR-1]
Length = 511
Score = 38.9 bits (89), Expect = 1.8, Method: Composition-based stats.
Identities = 16/129 (12%), Positives = 39/129 (30%), Gaps = 9/129 (6%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
H+G+A I D + R R + V ++ TD+ + + +
Sbjct: 16 GDPHVGHAYEYIATDAVARFKRLDGFD--VRFLTG-TDV-----HGLKMAETAAKLGVPT 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + N+ F + +L + +H + + ++ G Y +
Sbjct: 68 AELARSNSDVFQRLQEKLHISFDRFIRTSDPDHYEASKAIWRRMVDAGDVYLGKYSGWYS 127
Query: 156 TSSIPNYGS 164
+
Sbjct: 128 VRDERFFTE 136
>gi|122919781|pdb|2D54|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225a
Mutant From Thermus Thermophilus
Length = 502
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|262280117|ref|ZP_06057902.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
gi|262260468|gb|EEY79201.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus RUH2202]
Length = 688
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|227892176|ref|ZP_04009981.1| possible galactitol-1-phosphate 5-dehydrogenase [Lactobacillus
salivarius ATCC 11741]
gi|227865981|gb|EEJ73402.1| possible galactitol-1-phosphate 5-dehydrogenase [Lactobacillus
salivarius ATCC 11741]
Length = 349
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 12/68 (17%)
Query: 51 DVLYRLLRYYYGEKCVTYVRNIT--DIDDKIIERARQEHPSIPIN---DAISIITSKNTQ 105
D++ RLL+ V NI DIDDK +E+ +E S IN +A+ ++ T
Sbjct: 172 DLVIRLLKAAG-------VVNIIGIDIDDKKLEKGLEEGCSYVINSAKEALEEKVAEYTN 224
Query: 106 QFVKDTTR 113
D T
Sbjct: 225 GQGVDITM 232
>gi|225872764|ref|YP_002754221.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
gi|225792609|gb|ACO32699.1| leucine--tRNA ligase [Acidobacterium capsulatum ATCC 51196]
Length = 887
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 39/160 (24%), Gaps = 19/160 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + D L R + V + D A E+ ++ N
Sbjct: 77 HMGHVRNYSIGDALARYMWMQGY--NVLHPMG---WD------AFGLPAENAALKNNTPP 125
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI- 152
T N K RL T + + + G AY +++
Sbjct: 126 REWTLSNIAHMHKQMDRLGLSYDWRNEVTTCLPEYYRWNQWFFLRMYEKGLAYRKQSKVN 185
Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+++ + +
Sbjct: 186 WCPQCATVLANEQVVNGCCWRHEDQIVEQRDLEQWFLRIT 225
>gi|78100832|pdb|1WOY|A Chain A, Crystal Structure Of Methionyl Trna Synthetase Y225f
Mutant From Thermus Thermophilus
gi|119389107|pdb|2D5B|A Chain A, Crystal Structure Of Thermus Thermophilus Methionyl Trna
Synthetase Y225f Mutant Obtained In The Presence Of
Peg6000
Length = 500
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|319404147|emb|CBI77740.1| Arginyl-tRNA synthetase [Bartonella rochalimae ATCC BAA-1498]
Length = 588
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 56/374 (14%), Positives = 104/374 (27%), Gaps = 46/374 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KIIERARQEH 87
PT H+G+ R ++ DVL LL++ E Y N D K++ R+
Sbjct: 136 PT--GPMHVGHCRGAVIGDVLANLLQFAGYEVTKEYYIN-----DAGEQIKVLARSVMLR 188
Query: 88 PSIPINDAISIITS-----KNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
+ IS I + + + + + I ++
Sbjct: 189 YREALGQTISEIPEGLYPGEYLIPLGQSLAKKFGDKLLIIDQEEALSTIQEHAIDAMMAM 248
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
A I D + + + Y K K EP
Sbjct: 249 IRKDLAALNIYHDVFFSERTLYENNAQAIRSTITDLTLSGYIYKGILPPPKGKNVEDWEP 308
Query: 203 GWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
++ + G + + + S F F H +E+ AD
Sbjct: 309 REQTLFRSTDIGDDQDRALIKSDNSYTYFAADVAYFRDKFNRHFDEMIYILGADHTGYVK 368
Query: 263 NIWIHNGFLNLEG-------------------RKMSKSNGNFITINELLETKKFGGRSWP 303
+ ++ +MSK G+F+T+ +++E
Sbjct: 369 RLEAVAKAISGNKAKLTVLLCQLVKLFRDGQPVRMSKRAGSFVTLRDVVEEVGR------ 422
Query: 304 APVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTS---TSKGIIDPAVLSALYNDLN 360
+R ML P+DF ++TE + + A + +
Sbjct: 423 -DPVRFMMLYRKCEAPLDFDFAKVTEQSKDNPVFYVQYAHARCHSVFRQAQEVFRTENPS 481
Query: 361 TVSAIQALHKLARE 374
+ I L +L E
Sbjct: 482 NSTMIAHLDQLVDE 495
>gi|225703056|ref|NP_780419.2| ATP-binding cassette, sub-family A (ABC1), member 12 [Mus musculus]
Length = 2595
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 54/237 (22%), Gaps = 12/237 (5%)
Query: 71 NITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
N TD DDK++ R+ + E + + ++I+ ++F L
Sbjct: 1704 NFTDRDDKVLTRSEKLEGFGLLLKKIMAIL----IKRFHHTRRNWKGLIAQVILPIVFVA 1759
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
M + + + I+ TS + +
Sbjct: 1760 TAMGLGTLRDSSNSYPEIMISPSIYGTSEQTAFYANFDPSTSGLVSALWNFPGIDNVCLN 1819
Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG-------LDLIF 242
L W + CS + +L
Sbjct: 1820 TSDLQCLKKDDLGKWNTSGEAIDNFGVCSCSDNVQECPKFNYHPPHRRTYSSQVIYNLTG 1879
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
H EN + + ++ N ++ N + + +
Sbjct: 1880 KHMENYLITTANHFVQKRYGGWSFGMKLTNDLRFDVTAVPDNRTLAKVWYDPEGYHS 1936
>gi|187957236|gb|AAI58064.1| Abca12 protein [Mus musculus]
Length = 2595
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 54/237 (22%), Gaps = 12/237 (5%)
Query: 71 NITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
N TD DDK++ R+ + E + + ++I+ ++F L
Sbjct: 1704 NFTDRDDKVLTRSEKLEGFGLLLKKIMAIL----IKRFHHTRRNWKGLIAQVILPIVFVA 1759
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
M + + + I+ TS + +
Sbjct: 1760 TAMGLGTLRDSSNSYPEIMISPSIYGTSEQTAFYANFDPSTSGLVSALWNFPGIDNVCLN 1819
Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG-------LDLIF 242
L W + CS + +L
Sbjct: 1820 TSDLQCLKKDDLGKWNTSGEAIDNFGVCSCSDNVQECPKFNYHPPHRRTYSSQVIYNLTG 1879
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
H EN + + ++ N ++ N + + +
Sbjct: 1880 KHMENYLITTANHFVQKRYGGWSFGMKLTNDLRFDVTAVPDNRTLAKVWYDPEGYHS 1936
>gi|187956996|gb|AAI58054.1| Abca12 protein [Mus musculus]
Length = 2595
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 25/237 (10%), Positives = 54/237 (22%), Gaps = 12/237 (5%)
Query: 71 NITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHI 129
N TD DDK++ R+ + E + + ++I+ ++F L
Sbjct: 1704 NFTDRDDKVLTRSEKLEGFGLLLKKIMAIL----IKRFHHTRRNWKGLIAQVILPIVFVA 1759
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
M + + + I+ TS + +
Sbjct: 1760 TAMGLGTLRDSSNSYPEIMISPSIYGTSEQTAFYANFDPSTSGLVSALWNFPGIDNVCLN 1819
Query: 190 DFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGG-------LDLIF 242
L W + CS + +L
Sbjct: 1820 TSDLQCLKKDDLGKWNTSGEAIDNFGVCSCSDNVQECPKFNYHPPHRRTYSSQVIYNLTG 1879
Query: 243 PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGG 299
H EN + + ++ N ++ N + + +
Sbjct: 1880 KHMENYLITTANHFVQKRYGGWSFGMKLTNDLRFDVTAVPDNRTLAKVWYDPEGYHS 1936
>gi|165872552|ref|ZP_02217184.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|227812711|ref|YP_002812720.1| methionyl-tRNA synthetase [Bacillus anthracis str. CDC 684]
gi|254756363|ref|ZP_05208392.1| methionyl-tRNA synthetase [Bacillus anthracis str. Vollum]
gi|164711680|gb|EDR17225.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0488]
gi|227004168|gb|ACP13911.1| methionine--tRNA ligase [Bacillus anthracis str. CDC 684]
Length = 660
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKCMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISCDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|262368863|ref|ZP_06062192.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
gi|262316541|gb|EEY97579.1| methionyl-tRNA synthetase [Acinetobacter johnsonii SH046]
Length = 685
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPED 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|257457531|ref|ZP_05622698.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
gi|257444917|gb|EEV19993.1| methionyl-tRNA synthetase [Treponema vincentii ATCC 35580]
Length = 791
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 24/203 (11%), Positives = 47/203 (23%), Gaps = 20/203 (9%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----EH 87
P V + H+GN ++ DV R R YV TD + E
Sbjct: 11 PYVNNIPHLGNLIQVLSADVFARFCRLRGYTSL--YVCG-TD----------EYGTATET 57
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
++ + +T + + ++I +G
Sbjct: 58 KALEEGKTPRELCDYYHAIHRDIYHWFNISFDYFGRTSTPQQTEIVQGIFKDIEKNGFIK 117
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWE 205
E E ++ R + ++
Sbjct: 118 EHTIEQLYCAHCNRFLADRYVRGTCPHCGYEDARGDQCEACGKLLEPTELKAPRCSTCGA 177
Query: 206 SPWGRGRPGWHIECSAMSSHYLG 228
+P R +I+ + Y
Sbjct: 178 APEPRSTKHLYIDLPGIVPQYEP 200
>gi|227877968|ref|ZP_03995972.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
gi|256844348|ref|ZP_05549834.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256849249|ref|ZP_05554682.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
gi|262047264|ref|ZP_06020222.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
gi|293381475|ref|ZP_06627470.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
214-1]
gi|312978357|ref|ZP_07790099.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
gi|227862438|gb|EEJ69953.1| methionine--tRNA ligase [Lactobacillus crispatus JV-V01]
gi|256613426|gb|EEU18629.1| methionyl-tRNA synthetase [Lactobacillus crispatus 125-2-CHN]
gi|256714025|gb|EEU29013.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-1A-US]
gi|260572509|gb|EEX29071.1| methionyl-tRNA synthetase [Lactobacillus crispatus MV-3A-US]
gi|290921945|gb|EFD98952.1| methionyl-tRNA synthetase, alpha subunit [Lactobacillus crispatus
214-1]
gi|310894700|gb|EFQ43772.1| methionine--tRNA ligase [Lactobacillus crispatus CTV-05]
Length = 658
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMAASYKKLWKSLNISYDKFIRTTDKEHVAAVQKIFEKLLAKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|219847645|ref|YP_002462078.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
gi|219541904|gb|ACL23642.1| isoleucyl-tRNA synthetase [Chloroflexus aggregans DSM 9485]
Length = 1066
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 41/310 (13%), Positives = 84/310 (27%), Gaps = 12/310 (3%)
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ I T+ V + ++ + + + +
Sbjct: 416 YAKRSWYIRTTAFKADLVANNQQIHWVPEHIRDGRFGNWLENNIDWAISRERYWGTPIPI 475
Query: 151 EIIFDTSSI------PNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
D S + R + + + D L +R + W
Sbjct: 476 WTNADGSHMVCIGSLAELEEKVGRSLRDLDLHRP-YIDEVVWEDPDHGLMRRIPDVADCW 534
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
WH + D +D A S N+
Sbjct: 535 FDSGSMPVAQWHYPFENRDVFEMSHPADYICEAVDQTRGWFYTLHAVSTLLFDRPAFKNV 594
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
L+ +G+KMSKS GN I E++ W + A R +D
Sbjct: 595 ICLGHILDKDGQKMSKSRGNVIEPQEVINAYGVDALRWY--LFTAAPPGNARRFSMDLVS 652
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN---TVSAIQALHKLARESTKNHDL 381
+ + + + L + +D ++ A+ AL++L + +T +
Sbjct: 653 ESMRKFLLTLWNTYAFFVTYANLDRWQPNSGRTAELQPIDRWALAALNQLVQTATAAFEE 712
Query: 382 LPIFNASAHI 391
+++A+ I
Sbjct: 713 YDVYSAANAI 722
>gi|315122341|ref|YP_004062830.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313495743|gb|ADR52342.1| methionyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 512
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 29/177 (16%), Positives = 48/177 (27%), Gaps = 11/177 (6%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A MI+ DVL R + V + T D+ KI + A+ I
Sbjct: 21 PHIGHAYEMIIADVLARF--HRLDGLDVLFT---TGTDEYGQKIAKSAQNAGIETKIFVD 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA---YEANNEI 152
+ + + + T I L + I G Y +E+
Sbjct: 76 QNSADFRQMADVFGISYDDFIRTTEKRHHDTCRILWQKILDKGDIYKGFYSGWYSLRDEM 135
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + E Y + A P + P
Sbjct: 136 YCGDDEVYKGEDGQHYNAQKNPVQWMEEEGYFFRLSAYQDKLLAYYDSHPEFILPLE 192
>gi|307331363|ref|ZP_07610483.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
gi|306882986|gb|EFN14052.1| arginyl-tRNA synthetase [Streptomyces violaceusniger Tu 4113]
Length = 595
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 9/44 (20%)
Query: 32 GPTVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVT 67
G TV D+A H+G+ R ++ D + R+L + EK V
Sbjct: 123 GTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFAG-EKVVR 165
>gi|302684835|ref|XP_003032098.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
gi|300105791|gb|EFI97195.1| hypothetical protein SCHCODRAFT_15714 [Schizophyllum commune H4-8]
Length = 539
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 11/146 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD---IDDKIIERARQEHPSIPINDA 95
HIG+ +++ D+ R R + EK ++ TD I KI +RA + P+
Sbjct: 42 PHIGHLYSLVIADIFARYSRLRHPEKPTYFLAG-TDEHGI--KI-QRAAEARGEEPL-AF 96
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
++++ + + H ++ + + + G Y+A +
Sbjct: 97 CDTLSAQF---RRLSQAADISYTVFMRTTSEQHHRAVVDVWKRLDEKGLIYKAAYAGWYS 153
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPE 181
S Y + + K T+
Sbjct: 154 VSDECFYTDAQVESVPDPKDPTKTIM 179
>gi|148992089|ref|ZP_01821863.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
gi|147929138|gb|EDK80149.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP9-BS68]
Length = 486
Score = 38.9 bits (89), Expect = 1.9, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 100/377 (26%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESYENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + ++ + G + + A
Sbjct: 179 EGGNIGGDWIIQKKDGYPTYNF--AVAIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|260551003|ref|ZP_05825208.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
gi|260405951|gb|EEW99438.1| methionyl-tRNA synthetase [Acinetobacter sp. RUH2624]
Length = 688
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|229586306|ref|YP_002844807.1| arginyl-tRNA synthetase [Rickettsia africae ESF-5]
gi|259511655|sp|C3PMA4|SYR_RICAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|228021356|gb|ACP53064.1| Arginyl-tRNA synthetase [Rickettsia africae ESF-5]
Length = 576
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 16/30 (53%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR I DVL R+L+
Sbjct: 128 PT--GPMHIGHARGAIYGDVLARILQKVSY 155
>gi|34556632|ref|NP_906447.1| arginyl-tRNA synthetase [Wolinella succinogenes DSM 1740]
gi|81833211|sp|Q7MAK6|SYR_WOLSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|34482346|emb|CAE09347.1| ARGINYL-TRNA SYNTHETASE [Wolinella succinogenes]
Length = 528
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR ++ D L R+ R+ Y N
Sbjct: 114 PT--GPLHIGHARGAVLGDALSRIGRHLGYALETEYYVN 150
>gi|157829738|pdb|1A8H|A Chain A, Methionyl-Trna Synthetase From Thermus Thermophilus
Length = 500
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARWHRLDGY 41
>gi|254181405|ref|ZP_04888002.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
gi|184211943|gb|EDU08986.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1655]
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|53725214|ref|YP_102479.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
gi|68565971|sp|Q62LE0|SYM_BURMA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|187649794|sp|A3MLM5|SYM_BURM7 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|187649795|sp|A2SAF7|SYM_BURM9 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|187649796|sp|A1V5W0|SYM_BURMS RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|52428637|gb|AAU49230.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 23344]
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|297563083|ref|YP_003682057.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
gi|296847531|gb|ADH69551.1| arginyl-tRNA synthetase [Nocardiopsis dassonvillei subsp.
dassonvillei DSM 43111]
Length = 581
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
P V H+G+ R +V D L R L +
Sbjct: 122 PNVAKEMHVGHLRTTVVGDALARTLEFLGHN 152
>gi|167718572|ref|ZP_02401808.1| methionyl-tRNA synthetase [Burkholderia pseudomallei DM98]
gi|167893288|ref|ZP_02480690.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 7894]
gi|237811322|ref|YP_002895773.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
gi|237504542|gb|ACQ96860.1| methionine--tRNA ligase [Burkholderia pseudomallei MSHR346]
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|124802025|ref|XP_001347338.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
gi|23494916|gb|AAN35251.1| methionine-tRNA ligase, putative [Plasmodium falciparum 3D7]
Length = 749
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 61/168 (36%), Gaps = 11/168 (6%)
Query: 35 VY---DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
VY D HIG+A I+ DVLY+ + EK + + +D+ KI ++ +
Sbjct: 150 VYYSNDRPHIGHAYCNILCDVLYKYEKLKGVEKKKKGIIFFSGMDEHGLKIEKKCNKNKM 209
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEA 148
I + I I++ K + + T H + + + ++ + + Y+
Sbjct: 210 KII--EYIDDISNYYKDMNKKLSVDVNLFYRTSYSF---HKMFVQNVWKYLVHNNYIYKD 264
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKR 196
+ ++ + R+ + + + + IL +
Sbjct: 265 TYKGYYNINEERYISEQELREGKYKIDNENIIYVEEENSYFFNILKFK 312
>gi|187649793|sp|A3N6Y1|SYM_BURP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|76810283|ref|YP_332622.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|254260859|ref|ZP_04951913.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
gi|123599931|sp|Q3JUY1|SYM_BURP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|76579736|gb|ABA49211.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1710b]
gi|254219548|gb|EET08932.1| methionine--tRNA ligase [Burkholderia pseudomallei 1710a]
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|53718640|ref|YP_107626.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|126454059|ref|YP_001065337.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|167844753|ref|ZP_02470261.1| methionyl-tRNA synthetase [Burkholderia pseudomallei B7210]
gi|167918019|ref|ZP_02505110.1| methionyl-tRNA synthetase [Burkholderia pseudomallei BCC215]
gi|254298272|ref|ZP_04965724.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
gi|68565972|sp|Q63W90|SYM_BURPS RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|187647709|sp|A3NSL6|SYM_BURP0 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|52209054|emb|CAH34994.1| methionyl-tRNA synthetase [Burkholderia pseudomallei K96243]
gi|126227701|gb|ABN91241.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 1106a]
gi|157808199|gb|EDO85369.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 406e]
Length = 725
Score = 38.9 bits (89), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|167901747|ref|ZP_02488952.1| methionyl-tRNA synthetase [Burkholderia pseudomallei NCTC 13177]
Length = 725
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|45358881|ref|NP_988438.1| lysyl-tRNA synthetase [Methanococcus maripaludis S2]
gi|45047747|emb|CAF30874.1| Lysyl-tRNA synthetase [Methanococcus maripaludis S2]
Length = 541
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 49/358 (13%), Positives = 97/358 (27%), Gaps = 44/358 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KI---IERA 83
G T HIGNAR + D +Y+ + E + ++ DD K+ + +
Sbjct: 33 GITPSGHIHIGNARETLTADAVYKGMLKKGAEAKLIFI-----ADDYDPLRKLYPFLPKE 87
Query: 84 RQEHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
+++ +P+++ F+ L TH+ I
Sbjct: 88 FEKYIGMPLSEIPCPQGCCKSYADHFLMPFLNSLEDLGVEITTHRANECYKAGMYNDAII 147
Query: 138 NIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ + + + D N K+ E K+ E
Sbjct: 148 TALENRLKIKELLDSYRKEPLADDWYPLNVVCEKCGKMHETKVINYNSEDKTITYVCKCG 207
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
P + PW P + G + G ++ I +
Sbjct: 208 FENTVKPFNGIGKLPWRVDWPAR--------WNIFGVTAEPMGKDHAASGGSYDTGIKIA 259
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
+ + L + + M S+ + ++ K V+R +L
Sbjct: 260 RQIFNYQAPEKMVYEWIQLKVGDKAMPMSSSSG-----VVFAVKDWTEICHPEVLRFLIL 314
Query: 313 MTHYREPIDFT-------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ IDF V E E + + ++ + D +L T
Sbjct: 315 KGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNENEKISLYELVTPK 372
>gi|299771390|ref|YP_003733416.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
gi|298701478|gb|ADI92043.1| methionyl-tRNA synthetase [Acinetobacter sp. DR1]
Length = 688
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|67587705|ref|XP_665270.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis TU502]
gi|54655858|gb|EAL35040.1| RIKEN cDNA 2610011N19 gene [Cryptosporidium hominis]
Length = 505
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D R+L Y E V +V
Sbjct: 36 MHVGHLRSTIIGDTTSRILEYLGFEVLRVNHV 67
>gi|325121110|gb|ADY80633.1| methionyl-tRNA synthetase [Acinetobacter calcoaceticus PHEA-2]
Length = 688
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|297526696|ref|YP_003668720.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
gi|297255612|gb|ADI31821.1| leucyl-tRNA synthetase [Staphylothermus hellenicus DSM 12710]
Length = 969
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 15/60 (25%), Positives = 23/60 (38%), Gaps = 11/60 (18%)
Query: 12 ERKIT--EFQA-IDPSNIRMYVCGPTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGE 63
R F+ I+P + Y TV Y + HIG+ R + D++ R R
Sbjct: 19 SRWKERKIFEPRIEPDKPK-YF--ITVPYPYTNAPLHIGHGRTYTIGDIIARYKRLRGYN 75
>gi|171320877|ref|ZP_02909876.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
gi|171093862|gb|EDT38994.1| methionyl-tRNA synthetase [Burkholderia ambifaria MEX-5]
Length = 723
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGVT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG--HAYEANNEI 152
+ + + +D ++ + I + A A +
Sbjct: 82 -PKQLIERVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERAIEQA 140
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ F + + + + +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDN 170
>gi|145343622|ref|XP_001416415.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
gi|144576640|gb|ABO94708.1| arginyl-tRNA synthetase [Ostreococcus lucimarinus CCE9901]
Length = 600
Score = 38.5 bits (88), Expect = 2.0, Method: Composition-based stats.
Identities = 15/120 (12%), Positives = 36/120 (30%), Gaps = 17/120 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYG-EKCVTYV--------RNITDIDDKIIERARQEHPS 89
H+G+ R I+ D L + + V +V +I+ ++ S
Sbjct: 189 MHVGHLRSTIIGDTLCNVFEFCGYTTTRVNHVGDWGTQFGM--------LIQFMKENGIS 240
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
+ + K +Q + + ++ P+ ++ + I A
Sbjct: 241 PDSSVSDLQACYKQAKQKFDVDDDFKAKSKDMVVKLQSYDPETAHMWRQICSASRAEFQT 300
>gi|251779970|ref|ZP_04822890.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
gi|243084285|gb|EES50175.1| methionine--tRNA ligase [Clostridium botulinum E1 str. 'BoNT E
Beluga']
Length = 645
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 37/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A ++ +
Sbjct: 23 HIGNTYTTVAADALARFKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGIT------P 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + G Y+
Sbjct: 72 IEHVDEIVAGIKDLWSMMNVSYDKFIRTTDEYHVKAVQDIFKKLHDQGDIYKSSYEGWYC 131
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 132 TPCESFWTDTQLVNGNCPDCGRPVEKSKEE 161
>gi|299116975|emb|CBN75079.1| Methionine--tRNA ligase [Ectocarpus siliculosus]
Length = 837
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 34/180 (18%), Positives = 48/180 (26%), Gaps = 21/180 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A I DVL R R K V + T D+ KI A +
Sbjct: 136 PHIGHAYEAIASDVLSRYQRMSG--KRVIFQ---TGSDEHGQKIANTAAKLGL------Q 184
Query: 96 ISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
I K +F + RL + + H L Q G + E +
Sbjct: 185 PIDICDKYAGKFQELNKRLLISNDLYMRTTSALHKETSQRLWQICADAGDIFLGKYEGWY 244
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
D E K+ +K +E W + P
Sbjct: 245 DEREEKYVT----DSDAELADFKDAFGSPLKRMSEASYFFKMGKYIE--WLIQYITDNPS 298
>gi|308491426|ref|XP_003107904.1| CRE-MARS-1 protein [Caenorhabditis remanei]
gi|308249851|gb|EFO93803.1| CRE-MARS-1 protein [Caenorhabditis remanei]
Length = 920
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 55/238 (23%), Gaps = 21/238 (8%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R + YV TD + E
Sbjct: 44 PYVNNVPHLGNIIGCVLSADVFARYCNLRGHQT--FYVGG-TD----------EYGTATE 90
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
++ + K T+H ++ + + +G+
Sbjct: 91 TKALQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNGYT 150
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGW 204
+ + +F + + ++
Sbjct: 151 STQSVDQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKCHMCK 210
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+P + + + + + D + + I S +E
Sbjct: 211 SAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEPRC 268
>gi|299471588|emb|CBN79450.1| Arginyl-tRNA Synthetase [Ectocarpus siliculosus]
Length = 616
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R+L + + + +V
Sbjct: 158 MHVGHLRSTIIGDTICRVLEFRGHDVVRLNHV 189
>gi|167585788|ref|ZP_02378176.1| methionyl-tRNA synthetase [Burkholderia ubonensis Bu]
Length = 724
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 41/167 (24%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 32 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 80
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPR---------ATNHIPQMIYLIQNIILHGHA 145
+ + + +D ++ + A
Sbjct: 81 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSEQIYVALKENGLIAEREIEQA 139
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 140 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGSTYLPTELLNPY 186
>gi|56964053|ref|YP_175784.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
gi|56910296|dbj|BAD64823.1| arginyl-tRNA synthetase [Bacillus clausii KSM-K16]
Length = 608
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
AHIG+ R + D L RLL+ V N +DD
Sbjct: 119 SAHIGHLRNACIGDTLARLLKTCGENVEVH---NY--VDD 153
>gi|312864508|ref|ZP_07724739.1| methionine--tRNA ligase [Streptococcus downei F0415]
gi|311099635|gb|EFQ57848.1| methionine--tRNA ligase [Streptococcus downei F0415]
Length = 669
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 22/129 (17%), Positives = 42/129 (32%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRMMNYD--VRY---LTGLDEHGQKIQQKAQEVGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ + L + H + + + ++ G Y +
Sbjct: 69 QEYVDGMAKDVKELWELLNISYDQFIRTTDDFHEEVVAKIFEKLLAQGDIYLGEYTGWYS 128
Query: 156 TSSIPNYGS 164
S +
Sbjct: 129 VSDEEFFTE 137
>gi|239831756|ref|ZP_04680085.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
gi|239824023|gb|EEQ95591.1| arginyl-tRNA synthetase [Ochrobactrum intermedium LMG 3301]
Length = 603
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 151 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 179
>gi|34764087|ref|ZP_00144966.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
gi|27886141|gb|EAA23438.1| Methionyl-tRNA synthetase; PROTEIN SECRETION CHAPERONIN CSAA
[Fusobacterium nucleatum subsp. vincentii ATCC 49256]
Length = 636
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + T+ T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---THFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 243 DKKFDKFWNNARVVHLIGKDI 263
>gi|306825043|ref|ZP_07458385.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304432479|gb|EFM35453.1| methionine--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 679
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 24/177 (13%), Positives = 45/177 (25%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI---- 92
HIG+A I DVL R R + V +T +D+ KI ++A + +
Sbjct: 34 HIGSAYTTIACDVLARYKRLMGYD-----VFCLTGLDEHGQKIQQKAEEAGITPQAYVDG 88
Query: 93 -----NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN----HIPQMIYLIQNIILHG 143
+ ++ + + R ++ +
Sbjct: 89 MAAGVKELWKLLDISYDKFIRTTDDYHEKVVAQVFERLLAQDDIYLGEYSGWYSVSDEEF 148
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D + I G E + K +K
Sbjct: 149 FTESQLAEVFRDEAGIVTGGIAPSGHEVEWVSEESYFLRLSKYQDRLVEFFKSHPDF 205
>gi|311743047|ref|ZP_07716855.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
gi|311313727|gb|EFQ83636.1| valyl-tRNA synthetase [Aeromicrobium marinum DSM 15272]
Length = 860
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R K V Y DD
Sbjct: 51 PTVSGSLHVGHVFSYTHTDLIARYQRMRG--KEVFYPMG---WDD 90
>gi|254507772|ref|ZP_05119903.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
gi|219549297|gb|EED26291.1| methionyl-tRNA synthetase [Vibrio parahaemolyticus 16]
Length = 686
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 45/425 (10%), Positives = 107/425 (25%), Gaps = 45/425 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I+ ++ ++ + F H + + ++ + +G
Sbjct: 72 -EMIAAVSEEHQKDF---AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRG 211
+FD + + + + P +P +
Sbjct: 128 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKD 187
Query: 212 RPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTANI 264
+ + S + + + + E+ + Q E
Sbjct: 188 SEHFFFDLPQFESMLKEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK 247
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
S N + L+ ++ + + Y + +
Sbjct: 248 DKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWKKDSTTELYHFIGKDIVYFHSLFW-- 305
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
E + P G + + + A L L E + + +
Sbjct: 306 --PAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAKL 363
Query: 385 FNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS--------- 427
+ + L +E + +N ++ I L + +R F+
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYKEFAD 423
Query: 428 -ADYI 431
AD I
Sbjct: 424 AADRI 428
>gi|260823635|ref|XP_002606186.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae]
gi|229291525|gb|EEN62196.1| hypothetical protein BRAFLDRAFT_126502 [Branchiostoma floridae]
Length = 560
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 19/206 (9%), Positives = 41/206 (19%), Gaps = 11/206 (5%)
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+H P ++ Y +T S + + +
Sbjct: 334 HHYPWSWCNTRSDDHGCTRYHHYPWSWCNTRSDDHGCTRYHHYPWSWCYTWSNDHGCTRY 393
Query: 187 NPADFILWKRSTPME---PGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP 243
+ + + PW R H + + Y + D
Sbjct: 394 HHYPWSWCNTRSDDHGCARYHHYPWNRCYTWSH---NYSCNRYYHYPWSWCNTRSDHHGC 450
Query: 244 HHENEIAQSCCADRIEKTANIWIHNGFLNLEGRK-----MSKSNGNFITINELLETKKFG 298
+ S C H+ + + ++ + +
Sbjct: 451 TRYHHYPWSWCYTWSHHYGCTRYHHYPWSWCNTRSHDHGCTRYHHYPWSRCNTRSHDHGC 510
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTV 324
R P R HY +
Sbjct: 511 TRYHNYPWNRCYTWSHHYGCTRNNDY 536
>gi|167823191|ref|ZP_02454662.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 9]
Length = 725
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 141 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|167814737|ref|ZP_02446417.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 91]
gi|217419503|ref|ZP_03451009.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
gi|217396807|gb|EEC36823.1| methionine--tRNA ligase [Burkholderia pseudomallei 576]
Length = 717
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|145346067|ref|XP_001417517.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577744|gb|ABO95810.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 573
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 8/55 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
H+G+A I DVL R + + V + T D+ KI E A ++
Sbjct: 87 GAPHMGHAYESISTDVLARY--HRAYGRQVLFQ---TGSDEHGQKIAEAAEEKGM 136
>gi|121598252|ref|YP_993613.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124385371|ref|YP_001028926.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10229]
gi|126450764|ref|YP_001081161.1| methionyl-tRNA synthetase [Burkholderia mallei NCTC 10247]
gi|167003048|ref|ZP_02268838.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
gi|238563610|ref|ZP_00438586.2| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|254177483|ref|ZP_04884138.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|254199383|ref|ZP_04905749.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
gi|254205698|ref|ZP_04912050.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
gi|254357859|ref|ZP_04974132.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|121227062|gb|ABM49580.1| methionyl-tRNA synthetase [Burkholderia mallei SAVP1]
gi|124293391|gb|ABN02660.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10229]
gi|126243634|gb|ABO06727.1| methionine--tRNA ligase [Burkholderia mallei NCTC 10247]
gi|147748979|gb|EDK56053.1| methionyl-tRNA synthetase [Burkholderia mallei FMH]
gi|147753141|gb|EDK60206.1| methionyl-tRNA synthetase [Burkholderia mallei JHU]
gi|148026986|gb|EDK85007.1| methionyl-tRNA synthetase [Burkholderia mallei 2002721280]
gi|160698522|gb|EDP88492.1| methionyl-tRNA synthetase [Burkholderia mallei ATCC 10399]
gi|238520348|gb|EEP83809.1| methionine--tRNA ligase [Burkholderia mallei GB8 horse 4]
gi|243061352|gb|EES43538.1| methionine--tRNA ligase [Burkholderia mallei PRL-20]
Length = 717
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|322411230|gb|EFY02138.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
dysgalactiae ATCC 27957]
Length = 665
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A + S
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAAEAGIS 66
>gi|306827914|ref|ZP_07461181.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
gi|304429833|gb|EFM32875.1| methionine--tRNA ligase [Streptococcus pyogenes ATCC 10782]
Length = 666
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|171186224|ref|YP_001795143.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
gi|229558527|sp|B1YAZ7|SYM_THENV RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|170935436|gb|ACB40697.1| methionyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
Length = 565
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 27/172 (15%), Positives = 47/172 (27%), Gaps = 21/172 (12%)
Query: 29 YVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKII 80
YV G P V H+GN ++ DV R LR + V +V T I
Sbjct: 4 YVIGSAWPYVQTVPHLGNLIGSVLSADVYARYLRLRGHD--VVFVSGSDMHGTPI----- 56
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNI 139
E +I + + +K + R + ++ HI + I
Sbjct: 57 -----EVEAIQLGVDPADYAAKMHNIVAELFKRWDISFDLYTHTHSDVHIKFVQDFFLKI 111
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G+ + E+ + R +
Sbjct: 112 YNNGYIFTREEEVPYCPRDRIYLPDRFIIGRCPYCGYERARGDQCENCGRLL 163
>gi|50913716|ref|YP_059688.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
gi|50902790|gb|AAT86505.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10394]
Length = 666
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|139474323|ref|YP_001129039.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
gi|73919759|sp|Q5XDK8|SYM_STRP6 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|134272570|emb|CAM30836.1| methionyl-tRNA synthetase [Streptococcus pyogenes str. Manfredo]
Length = 665
Score = 38.5 bits (88), Expect = 2.1, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 66
>gi|308456710|ref|XP_003090777.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
gi|308260732|gb|EFP04685.1| hypothetical protein CRE_09872 [Caenorhabditis remanei]
Length = 934
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/238 (9%), Positives = 55/238 (23%), Gaps = 21/238 (8%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R + YV TD + E
Sbjct: 58 PYVNNVPHLGNIIGCVLSADVFARYCNLRGHQT--FYVGG-TD----------EYGTATE 104
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
++ + K T+H ++ + + +G+
Sbjct: 105 TKALQEKCTPRELCDKYHTIHKGIYEWFGIDFTHFGRTTTDHQTEICQDMFMKLHQNGYT 164
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGW 204
+ + +F + + ++
Sbjct: 165 STQSVDQLFCNNCDKFLADRFVTGTCPYCAYDDARGDQCDGCGKLINAVELKNAKCHMCK 224
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
+P + + + + + D + + I S +E
Sbjct: 225 SAPEVKQSTHIFLSLDKLQEKTAKYLDVVMNDNPDSRWSANAVGITNSWTKLGLEPRC 282
>gi|269976474|ref|ZP_06183459.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
gi|269935275|gb|EEZ91824.1| valyl-tRNA synthetase [Mobiluncus mulieris 28-1]
Length = 892
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R K V Y DD
Sbjct: 58 PTVSGSLHVGHVFSYTHTDLVARYQRMRG--KNVFYPMG---WDD 97
>gi|227874925|ref|ZP_03993077.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
gi|306818249|ref|ZP_07451979.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
gi|227844502|gb|EEJ54659.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35243]
gi|304648988|gb|EFM46283.1| valine--tRNA ligase [Mobiluncus mulieris ATCC 35239]
Length = 892
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R K V Y DD
Sbjct: 58 PTVSGSLHVGHVFSYTHTDLVARYQRMRG--KNVFYPMG---WDD 97
>gi|242314917|ref|ZP_04813933.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
gi|254190803|ref|ZP_04897310.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|157938478|gb|EDO94148.1| methionyl-tRNA synthetase [Burkholderia pseudomallei Pasteur 52237]
gi|242138156|gb|EES24558.1| methionine--tRNA ligase [Burkholderia pseudomallei 1106b]
Length = 717
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|134281206|ref|ZP_01767915.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
gi|134247512|gb|EBA47597.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 305]
Length = 717
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|50083984|ref|YP_045494.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
gi|68565979|sp|Q6FE36|SYM_ACIAD RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|49529960|emb|CAG67672.1| methionyl-tRNA synthetase [Acinetobacter sp. ADP1]
Length = 685
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEK 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|332524700|ref|ZP_08400899.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
gi|332108008|gb|EGJ09232.1| leucyl-tRNA synthetase [Rubrivivax benzoatilyticus JA2]
Length = 874
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 18/42 (42%), Gaps = 2/42 (4%)
Query: 22 DPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
D S + Y C Y H+G+ R + D++ R LR
Sbjct: 29 DQSKPKFYACSMLPYPSGKLHMGHVRNYTINDMMARYLRMKG 70
>gi|307701819|ref|ZP_07638833.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
gi|307613077|gb|EFN92332.1| valine--tRNA ligase [Mobiluncus mulieris FB024-16]
Length = 892
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R K V Y DD
Sbjct: 58 PTVSGSLHVGHVFSYTHTDLVARYQRMRG--KNVFYPMG---WDD 97
>gi|306840369|ref|ZP_07473136.1| arginyl-tRNA synthetase [Brucella sp. BO2]
gi|306289654|gb|EFM60854.1| arginyl-tRNA synthetase [Brucella sp. BO2]
Length = 585
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|227903105|ref|ZP_04020910.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
gi|227869091|gb|EEJ76512.1| methionyl-tRNA synthetase [Lactobacillus acidophilus ATCC 4796]
Length = 661
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 25 IGNAYTTIAADTMARYKRSQGFDTFF-----LTGTDEHGLKIEQKAEAQGIK------PK 73
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 74 EFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 133
Query: 157 SSIPNYGS 164
+
Sbjct: 134 EDEEYFTE 141
>gi|94969059|ref|YP_591107.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
gi|94551109|gb|ABF41033.1| arginyl-tRNA synthetase [Candidatus Koribacter versatilis Ellin345]
Length = 647
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 53/401 (13%), Positives = 107/401 (26%), Gaps = 50/401 (12%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDD------KIIERARQE 86
AHIG+ R I+ D RLLR + V ++N D + D I +++ E
Sbjct: 124 AAHIGHLRNSILGDTFVRLLRAAG--RTVD-IQNYIDNTGVQVADVVVGFTHIENKSKAE 180
Query: 87 HPSIP----INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH 142
++ + + + +Q + + A H + I II
Sbjct: 181 ITALTEQPKFDYYCWDLYAHTSQWYEQAAE--NKKIRLEVLHAIEHGGNELSEIAEIISR 238
Query: 143 GHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKM--------GTRVPEKYHKKNPADFILW 194
+ S + + KN +++
Sbjct: 239 AVLRRHLETMDRLGIEYDFLPRESEILRLNFWALAFEQLKEKGVLYFETEGKNKGCWVMT 298
Query: 195 KRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL---IFPHHENEIAQ 251
+ G + + + ++ G D F + N
Sbjct: 299 RPGRERVDGQPDEDAKVIVRSNGTVGYVGKDIAYHLWKFGLLGRDFGYKKFYLYPNGQQV 358
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM 311
D E ++ G + ++ + T+ E + + ++ M
Sbjct: 359 WISCDPAEGESDHPHFGGVSEIYNVIDTRQSDPQETVKEAIRLLGYNDKADHYTHFSYEM 418
Query: 312 LMTHYREPIDF-----TVQRLTEAEILLSKWPQTSTSKGIID--------------PAVL 352
+ R ID R + + + +ID P +
Sbjct: 419 VALTPRCAIDLGYDVSEDDRAKSYIEVSGRKGFGVKADDLIDKLIDAATKEVDSRHPELT 478
Query: 353 SALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILG 393
+ ++ T AI AL + TK + F + G
Sbjct: 479 ESERREIGTQIAIGALRYFMLKYTKASVIAFDFKEALAFEG 519
>gi|94993743|ref|YP_601841.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10750]
gi|94547251|gb|ABF37297.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Streptococcus pyogenes MGAS10750]
Length = 666
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|78777263|ref|YP_393578.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
gi|78497803|gb|ABB44343.1| methionyl-tRNA synthetase [Sulfurimonas denitrificans DSM 1251]
Length = 644
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 28/176 (15%), Positives = 54/176 (30%), Gaps = 13/176 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V AHIG+A + D L R + + +T D+ KI E A++ S P
Sbjct: 12 VNGEAHIGHAYTTFIADTLARYEKLKGEDTYF-----LTGTDEHGQKIEESAQKN--SKP 64
Query: 92 INDAISIITSKNTQQFVK-DTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ I++ + + D + + T + ++ YE +
Sbjct: 65 TQEFADEISASFKNLWDEFDISYDKFIRTTDAEHKKGVQRAFEVMYAKGDIYKDFYEGHY 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF--ILWKRSTPMEPGW 204
+ +T D + V E+ + + + L K
Sbjct: 125 CVSCETFFTETQLVDGEFCPDCGRSTNIVKEESYFFRLSKYENALLKHYEENPDFI 180
>gi|52549705|gb|AAU83554.1| arginyl-tRNA synthetase [uncultured archaeon GZfos31B6]
Length = 559
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+L+ + + Y N
Sbjct: 128 HVGHIRNSIIGDTLARILKTAGYDVEIQYYVN 159
>gi|91773687|ref|YP_566379.1| arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
gi|121691659|sp|Q12V97|SYR_METBU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|91712702|gb|ABE52629.1| Arginyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
Length = 567
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+L+ + + Y N
Sbjct: 128 HVGHIRNSIIGDTLGRILKRAGYDVELHYYVN 159
>gi|58336554|ref|YP_193139.1| methionyl-tRNA synthetase [Lactobacillus acidophilus NCFM]
gi|58253871|gb|AAV42108.1| met-tRNA synthetase [Lactobacillus acidophilus NCFM]
Length = 658
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGFDTFF-----LTGTDEHGLKIEQKAEAQGIK------PK 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMADSYKKLWKSLNISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|332321729|sp|P0CW67|SYK_METMP RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
Length = 533
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 49/358 (13%), Positives = 97/358 (27%), Gaps = 44/358 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KI---IERA 83
G T HIGNAR + D +Y+ + E + ++ DD K+ + +
Sbjct: 25 GITPSGHIHIGNARETLTADAVYKGMLKKGAEAKLIFI-----ADDYDPLRKLYPFLPKE 79
Query: 84 RQEHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
+++ +P+++ F+ L TH+ I
Sbjct: 80 FEKYIGMPLSEIPCPQGCCKSYADHFLMPFLNSLEDLGVEITTHRANECYKAGMYNDAII 139
Query: 138 NIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ + + + D N K+ E K+ E
Sbjct: 140 TALENRLKIKELLDSYRKEPLADDWYPLNVVCEKCGKMHETKVINYNSEDKTITYVCKCG 199
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
P + PW P + G + G ++ I +
Sbjct: 200 FENTVKPFNGIGKLPWRVDWPAR--------WNIFGVTAEPMGKDHAASGGSYDTGIKIA 251
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
+ + L + + M S+ + ++ K V+R +L
Sbjct: 252 RQIFNYQAPEKMVYEWIQLKVGDKAMPMSSSSG-----VVFAVKDWTEICHPEVLRFLIL 306
Query: 313 MTHYREPIDFT-------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ IDF V E E + + ++ + D +L T
Sbjct: 307 KGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNENEKISLYELVTPK 364
>gi|327400045|ref|YP_004340884.1| Lysyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
gi|327315553|gb|AEA46169.1| Lysyl-tRNA synthetase [Archaeoglobus veneficus SNP6]
Length = 494
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T H+GN R M+ D + R + GE + Y+
Sbjct: 27 GITPSGHIHLGNLREMLTADAVRRAVIDRGGEAEMIYI 64
>gi|325283885|ref|YP_004256426.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
gi|324315694|gb|ADY26809.1| Arginyl-tRNA synthetase [Deinococcus proteolyticus MRP]
Length = 609
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 17/79 (21%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R +++ D L R++R V +N IDD +A + +
Sbjct: 121 HVGHLRNVVLGDSLARIMRAAGHTVEV---QNY--IDD-TGRQAAESLFARDFYHLEWDG 174
Query: 100 TSKNTQQFVKDTTRLACLA 118
K K RL
Sbjct: 175 QEKYDHWMGKGYVRLNADP 193
>gi|317052384|ref|YP_004113500.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
gi|316947468|gb|ADU66944.1| arginyl-tRNA synthetase [Desulfurispirillum indicum S5]
Length = 556
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 38/368 (10%), Positives = 88/368 (23%), Gaps = 23/368 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
PT HIG+ R V D + R+L Y Y I A + ++ +
Sbjct: 132 PT--GPLHIGHGRGAAVGDAIARILEYAGYNVHREYY----------INDAGNQMNNLGL 179
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I + ++ + + T R + + ++
Sbjct: 180 STYIRYMQLLGHEEMTLEESCYQGDYITDIARDVLTKYGRKFEGDRSSIPFFTT-LTGDV 238
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE------S 206
I + ++ K + W
Sbjct: 239 ILQGIKDDLQRFRVSFDHYFSEKDLHEQGHVSRELDQLQTAGKAYEEGDALWVRTTAFGD 298
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGG---GLDLIFPHHENEIAQSCCADRIEKTAN 263
R + E + ++ G +D+ H + + A +
Sbjct: 299 DKDRVVRRGNGETTYFAADIAYHRNKFQRGFDTLIDIWGADHHGYVNRLKAAVNLLDRNP 358
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+ + L + + T + + + R LM +DF
Sbjct: 359 DDLEVILIQLVSLQRAGVPVAMSTRSGEFDALRDVLDEVGTDAARYFFLMRRCDSHLDFD 418
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
++ + + + ND + A+ ++ + DL
Sbjct: 419 LELAKQQTNDNPVFYVQYCHA-RCCSIIEQLKANDKYPQQNLDAIDFSVMDTEQEKDLAK 477
Query: 384 IFNASAHI 391
+ +
Sbjct: 478 VLGRFTEV 485
>gi|160933682|ref|ZP_02081070.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
gi|156867559|gb|EDO60931.1| hypothetical protein CLOLEP_02543 [Clostridium leptum DSM 753]
Length = 650
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 20/142 (14%), Positives = 38/142 (26%), Gaps = 19/142 (13%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KI-IERARQEHPSIPIND 94
AHIG++ + D + R R + V +T D+ KI + A+
Sbjct: 19 AHIGHSYCTVATDAIARYKRMQGYD-----VMFLTGTDEHGQKIELNAAK-------AGV 66
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAY--EANNE 151
+ F + L H+ + + + + G Y +
Sbjct: 67 TPKEYVDEIVAGFQELWKLLNISNDRFIRTTDDYHVKAVQKIFKELYDRGEIYKGKYEGW 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQ 173
S K +
Sbjct: 127 YCTPCESFWTETQLKDGKCPDC 148
>gi|118587914|ref|ZP_01545324.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
gi|118439536|gb|EAV46167.1| methionyl-tRNA synthetase [Stappia aggregata IAM 12614]
Length = 517
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V HIG+A ++ D+L R + +
Sbjct: 23 VNGSPHIGHAFTSVMADILKRNRQALGYD 51
>gi|71902998|ref|YP_279801.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
gi|71802093|gb|AAX71446.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS6180]
Length = 666
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|326798841|ref|YP_004316660.1| methionyl-tRNA synthetase [Sphingobacterium sp. 21]
gi|326549605|gb|ADZ77990.1| Methionyl-tRNA synthetase [Sphingobacterium sp. 21]
Length = 688
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 24/161 (14%), Positives = 46/161 (28%), Gaps = 30/161 (18%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR K V +V IT +A++E +
Sbjct: 21 HIGHLAGAYIPADIFVRFLRM--NNKEVAFVCGSDEHGAAIT-------IKAKKEGIT-- 69
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I K Q + + R ++ I + +
Sbjct: 70 ----PQQIIDKYNAQIKESFEQFGIS-FDIYHRTSSKIH------HELSQEFFLNLYDKG 118
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ S Y + + ++ + P +++ D
Sbjct: 119 EFVEKYSEQYYDEEYHQFLADRYIVGTCPNCHNEGAYGDQC 159
>gi|320334541|ref|YP_004171252.1| arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
gi|319755830|gb|ADV67587.1| Arginyl-tRNA synthetase [Deinococcus maricopensis DSM 21211]
Length = 613
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 6/79 (7%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISII 99
H+G+ R +++ D + R+ R V +N IDD +A + + +
Sbjct: 121 HVGHVRNVVLGDSMARIFRAAGYPVEV---QNY--IDD-TGRQAAESLFARDHYGRVWDG 174
Query: 100 TSKNTQQFVKDTTRLACLA 118
K + RL
Sbjct: 175 QQKYDHWMGEGYVRLNADP 193
>gi|312211904|emb|CBX91988.1| hypothetical protein [Leptosphaeria maculans]
Length = 738
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 16/161 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V + H+GN ++ DV R R YV TD E +I
Sbjct: 24 PYVNNVPHLGNIVGSVLSADVFARFSRARGYNTL--YVCG-TD-----EYGTATETKAIE 75
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ K + T + I N
Sbjct: 76 EKVTPKELCDKYYALHSEVYKWFNISFDHFGRTPTQQQTDIAQDI-------FTKLYKNG 128
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ + + Y + + ++ + P ++ D
Sbjct: 129 YLEEQVTTQPYCETHKSFLADRFVEGTCPLCNYEDARGDQC 169
>gi|254718981|ref|ZP_05180792.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
gi|265983971|ref|ZP_06096706.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
gi|306837329|ref|ZP_07470210.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
gi|306843774|ref|ZP_07476372.1| arginyl-tRNA synthetase [Brucella sp. BO1]
gi|264662563|gb|EEZ32824.1| arginyl-tRNA synthetase [Brucella sp. 83/13]
gi|306275852|gb|EFM57568.1| arginyl-tRNA synthetase [Brucella sp. BO1]
gi|306407581|gb|EFM63779.1| arginyl-tRNA synthetase [Brucella sp. NF 2653]
Length = 585
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|237736331|ref|ZP_04566812.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
gi|229421679|gb|EEO36726.1| leucyl-tRNA synthetase [Fusobacterium mortiferum ATCC 9817]
Length = 869
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/194 (11%), Positives = 51/194 (26%), Gaps = 35/194 (18%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKI---------IERARQEHPSI 90
H+G+AR + DV+ R R V N + A Q
Sbjct: 49 HVGHARNYTIGDVIARYKRMKGYN-----VLN------PMGWDSFGLPAENAAIQNGA-- 95
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYE 147
++ T N + + L + ++ + + G Y+
Sbjct: 96 ----HPAVWTKSNIENMRRQLKLLGFSYDWDREIASYTPEYYKWNQWMFKRLYEKGLIYK 151
Query: 148 ANN--EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPME 201
+ D +++ K + + ++ + L + ++
Sbjct: 152 KKSLVNWCPDCNTVLANEQVEDGKCWRHSKTSVIQKELEQWFFKITDYADELLEGHKELK 211
Query: 202 PGWESPWGRGRPGW 215
GW + W
Sbjct: 212 DGWPEKVLTMQKNW 225
>gi|256832195|ref|YP_003160922.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
denitrificans DSM 20603]
gi|256685726|gb|ACV08619.1| tRNA synthetase valyl/leucyl anticodon-binding [Jonesia
denitrificans DSM 20603]
Length = 901
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 66 PTVSGSLHVGHVFSYTHTDVIARYQRMTG--KNVFYPMG---WDD 105
>gi|91773806|ref|YP_566498.1| lysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
gi|91712821|gb|ABE52748.1| Lysyl-tRNA synthetase [Methanococcoides burtonii DSM 6242]
Length = 528
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 16/38 (42%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
G T HIGN R ++ D YR + E Y+
Sbjct: 27 GITPSGHIHIGNMREVVTADAAYRAMNDAGLESEFIYI 64
>gi|294785169|ref|ZP_06750457.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|294486883|gb|EFG34245.1| methionine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 636
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + T+ T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---THFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 243 DKKFDKFWNNARVVHLIGKDI 263
>gi|225016542|ref|ZP_03705734.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
DSM 5476]
gi|224950651|gb|EEG31860.1| hypothetical protein CLOSTMETH_00449 [Clostridium methylpentosum
DSM 5476]
Length = 669
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/174 (13%), Positives = 44/174 (25%), Gaps = 13/174 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEHPSIPIN 93
HIGN ++ D + R R + V +V TD ++D A++ S
Sbjct: 38 PHIGNTYEIVFADAVARFKRMQGYD--VHFVTG-TDEHGQKVED----LAKESGISPKQY 90
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
K + T L ++ Y+ +
Sbjct: 91 VDSVAGEIKTIWDLMDSTYDTFIRTTDDYH-ERVVQKIFKKLYDQGDIYKSEYQGLYCVP 149
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
++ + +++ E Y K P + P
Sbjct: 150 CESFFTETQLVDGKCPDCGREVVPTKEEAYFFKMSKYQDRLMEYIEQHPDFIQP 203
>gi|171742062|ref|ZP_02917869.1| hypothetical protein BIFDEN_01166 [Bifidobacterium dentium ATCC
27678]
gi|283456811|ref|YP_003361375.1| valyl-tRNA synthetase [Bifidobacterium dentium Bd1]
gi|171277676|gb|EDT45337.1| hypothetical protein BIFDEN_01166 [Bifidobacterium dentium ATCC
27678]
gi|283103445|gb|ADB10551.1| valyl-tRNA synthetase [Bifidobacterium dentium Bd1]
Length = 929
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R R + V Y
Sbjct: 58 PTVSGHLHVGHVFSYTHTDIIARFKRMNGFD--VFY 91
>gi|21909836|ref|NP_664104.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS315]
gi|25009347|sp|P59080|SYM_STRP3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|21904022|gb|AAM78907.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes
MGAS315]
Length = 665
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 66
>gi|254228670|ref|ZP_04922094.1| Fe-S protein assembly chaperone HscA [Vibrio sp. Ex25]
gi|262395125|ref|YP_003286979.1| chaperone protein HscA [Vibrio sp. Ex25]
gi|151938849|gb|EDN57683.1| Fe-S protein assembly chaperone HscA [Vibrio sp. Ex25]
gi|262338719|gb|ACY52514.1| chaperone protein HscA [Vibrio sp. Ex25]
Length = 617
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 431 TAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQSEIQVKPSYGLSDNEVADMLRDSMTH---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G E+ E +++ AIE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDELLSEQEKQDLIKAIEALIELR-----NGD--DADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|126440819|ref|YP_001058102.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 668]
gi|167909986|ref|ZP_02497077.1| methionyl-tRNA synthetase [Burkholderia pseudomallei 112]
gi|254196314|ref|ZP_04902738.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
gi|126220312|gb|ABN83818.1| methionine--tRNA ligase [Burkholderia pseudomallei 668]
gi|169653057|gb|EDS85750.1| methionyl-tRNA synthetase [Burkholderia pseudomallei S13]
Length = 717
Score = 38.5 bits (88), Expect = 2.2, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|317123532|ref|YP_004097644.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
gi|315587620|gb|ADU46917.1| arginyl-tRNA synthetase [Intrasporangium calvum DSM 43043]
Length = 586
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 14/30 (46%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
P V H+G+ R IV D L R L +
Sbjct: 122 PNVAKEMHVGHLRTTIVGDSLARTLEHLGH 151
>gi|262376740|ref|ZP_06069968.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
gi|262308450|gb|EEY89585.1| methionyl-tRNA synthetase [Acinetobacter lwoffii SH145]
Length = 686
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 17/63 (26%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA S
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGISPEA 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|223985467|ref|ZP_03635526.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
12042]
gi|223962556|gb|EEF67009.1| hypothetical protein HOLDEFILI_02832 [Holdemania filiformis DSM
12042]
Length = 642
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 50/416 (12%), Positives = 100/416 (24%), Gaps = 81/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI ++A+ +
Sbjct: 18 PHIGNTYEIVLADSIARYKRMLGYD--VFFQ---TGTDEHGQKIEDKAKAAGVAPQQFVD 72
Query: 96 -----ISII----------------------TSKNTQQFVKDTTRLACLAPTHQPRATNH 128
I I K ++ +
Sbjct: 73 QVAGQIKEIWDLMNTSYDKFMRTTDPDHERQVQKIFKKLYDQGDIYKSEYEGWYCKPCES 132
Query: 129 IPQMIYLIQN------------------IILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
++ + +A I + I +
Sbjct: 133 FFTESQIVDGKCPDCGAPVEKAKEEAYFFRMSKYADRLLKHIEENPEFIQPESRKNEMIN 192
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ K G + + + W G +C
Sbjct: 193 NFIKPGLQDLCVSRTSFTWGVPVDFDPKHVVYVWIDALTNYITGLGYDCDGNHGEKFKHY 252
Query: 231 FD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ +H G D++ H D + +L + KMSKS GN I
Sbjct: 253 WPADVHLIGKDILRFHTIYWPIMLMALD--LPLPKQVFGHPWLLVGEGKMSKSKGNVIYA 310
Query: 289 NELLETKKFGGRSWPAP---------VIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
++L+ + + +++ + + L + ++
Sbjct: 311 DDLVRYFGVDAVRYIMLHEMPFAQDGTVTYELMIERINSDLANILGNLVNRTLSMTNKYF 370
Query: 340 TS---------------TSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ PA + ++L AI + L R S K D
Sbjct: 371 GGLVHNANVSDPIDDELIALAKATPANVQKKMDELRVADAIDEIFALLRRSNKYID 426
>gi|251796284|ref|YP_003011015.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
gi|247543910|gb|ACT00929.1| methionyl-tRNA synthetase [Paenibacillus sp. JDR-2]
Length = 663
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 22/178 (12%), Positives = 44/178 (24%), Gaps = 20/178 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+A + D + R R + V Y +T D+ KI A+ + N
Sbjct: 19 DKLHIGHAYTTVAGDAMARYKRLRGYD--VWY---LTGTDEHGQKIERNAKDK------N 67
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--ANN 150
+ + ++L H + + ++ Y+
Sbjct: 68 KSPQQFVDDIVVGIKELWSKLEISNDDFIRTTEPRHKEAVEKIFAQLLKQDDIYKGEYEG 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI---LWKRSTPMEPGWE 205
S + + ++ L K +
Sbjct: 128 WYCTPCESFFLERQLVNGNCPDCGRPVELVKEESYFFRMSKYADRLLKHYEENPDFIQ 185
>gi|148560686|ref|YP_001258851.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
gi|166232762|sp|A5VQ54|SYR_BRUO2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|148371943|gb|ABQ61922.1| arginyl-tRNA synthetase [Brucella ovis ATCC 25840]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|195978584|ref|YP_002123828.1| valyl-tRNA synthetase [Streptococcus equi subsp. zooepidemicus
MGCS10565]
gi|195975289|gb|ACG62815.1| valyl-tRNA synthetase ValS [Streptococcus equi subsp. zooepidemicus
MGCS10565]
Length = 883
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 36/201 (17%), Positives = 66/201 (32%), Gaps = 16/201 (7%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S + G D+IF I QS
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDTDAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 496
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ +N+ IH + EGRKMSKS GN I +++E + A +R +
Sbjct: 497 EFTGRKPFSNVLIHGLIRDQEGRKMSKSLGNGIDPMDVIE-------KYGADSLRWFLSN 549
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ + F+ +++ + ++K S + L A + ++
Sbjct: 550 GSAPGQDVRFSYEKMDASWNFINKIWNIS--------RYILMNNEGLTLEQATANVEQVV 601
Query: 373 RESTKNHDLLPIFNASAHILG 393
+ N I + +G
Sbjct: 602 SGAAGNVTDRWILHNLNETIG 622
>gi|309801733|ref|ZP_07695853.1| valine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
gi|308221675|gb|EFO77967.1| valine--tRNA ligase [Bifidobacterium dentium JCVIHMP022]
Length = 929
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R R + V Y
Sbjct: 58 PTVSGHLHVGHVFSYTHTDIIARFKRMNGFD--VFY 91
>gi|306824242|ref|ZP_07457612.1| valine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
gi|304552445|gb|EFM40362.1| valine--tRNA ligase [Bifidobacterium dentium ATCC 27679]
Length = 929
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R R + V Y
Sbjct: 58 PTVSGHLHVGHVFSYTHTDIIARFKRMNGFD--VFY 91
>gi|317152912|ref|YP_004120960.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
gi|316943163|gb|ADU62214.1| methionyl-tRNA synthetase [Desulfovibrio aespoeensis Aspo-2]
Length = 658
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 45/181 (24%), Gaps = 19/181 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A V D L R + + + +T D DKI++ A
Sbjct: 13 VNAKPHLGHAYTTTVADSLRRF--HSLMGEETYF---LTGTDEHGDKIVQAAEANG---- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE--A 148
+ + F + HI + ++Q + G Y
Sbjct: 64 --QSPRDYVDAVSGLFKALLPDMNISNDDFIRTTEPRHIKVVQSILQKVHDSGDIYFGEY 121
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKM--GTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
F + + + Y + K P +
Sbjct: 122 GGHYCFGCERFYTEKELVDGLCPDHQTKPEYIAEKNYFFRMSKYQGWLKEHIRTNPDFIR 181
Query: 207 P 207
P
Sbjct: 182 P 182
>gi|256060982|ref|ZP_05451140.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261324984|ref|ZP_05964181.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
gi|261300964|gb|EEY04461.1| arginyl-tRNA synthetase [Brucella neotomae 5K33]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|254994884|ref|ZP_05277074.1| leucyl-tRNA synthetase [Anaplasma marginale str. Mississippi]
Length = 824
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 25/162 (15%), Positives = 51/162 (31%), Gaps = 19/162 (11%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR-- 84
YV G Y H+G+ R + DV+ R R + V + I A
Sbjct: 29 YVLGMFPYPSGNIHMGHIRNYTIGDVIARYKRAHG--LKVLH---------PIGWDAFGL 77
Query: 85 -QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNII 140
E+ ++ ++ T +N + K + + AT + + +
Sbjct: 78 PAENAALSYRVNPAVWTERNIESMRKQLKSIGISYNWDREIATCKEDYYKHEQAFFLDFL 137
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
G AY + + +D + + G ++ +
Sbjct: 138 QQGLAYRKESWVNWDPVDNTVLANEQVVDGRGWRSGAKIERR 179
>gi|225852389|ref|YP_002732622.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|256264113|ref|ZP_05466645.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|254782946|sp|C0RIL0|SYR_BRUMB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|225640754|gb|ACO00668.1| arginyl-tRNA synthetase [Brucella melitensis ATCC 23457]
gi|263094331|gb|EEZ18176.1| arginyl-tRNA synthetase [Brucella melitensis bv. 2 str. 63/9]
gi|326408895|gb|ADZ65960.1| arginyl-tRNA synthetase [Brucella melitensis M28]
gi|326538613|gb|ADZ86828.1| arginyl-tRNA synthetase [Brucella melitensis M5-90]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|255567961|ref|XP_002524958.1| hypothetical protein RCOM_1155060 [Ricinus communis]
gi|223535793|gb|EEF37455.1| hypothetical protein RCOM_1155060 [Ricinus communis]
Length = 378
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 25/133 (18%), Positives = 40/133 (30%), Gaps = 29/133 (21%)
Query: 329 EAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNAS 388
E L SK+ T I L + + L T S I + ++ K L+ + +
Sbjct: 178 EMLSLFSKFQSELTPPVIDIQVALQNVNDALKTGSCILQDPEQVKKLKKALHLISTYRSE 237
Query: 389 AHILGIEVCKEHLNKNISIAIEKL-VQERLI--------------LLKMKKFSSA----- 428
K + N+ I+KL + R K F A
Sbjct: 238 DS---FSSAKVSVTANLEQEIDKLEAKFRNAEDVVTRTLQLQANKARAEKDFQEAYLLLK 294
Query: 429 ------DYIRKQL 435
D I+ Q+
Sbjct: 295 ELKAKDDQIKDQI 307
>gi|23501763|ref|NP_697890.1| arginyl-tRNA synthetase [Brucella suis 1330]
gi|161618837|ref|YP_001592724.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|225627365|ref|ZP_03785402.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|254701641|ref|ZP_05163469.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|254706913|ref|ZP_05168741.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|254709979|ref|ZP_05171790.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|254713979|ref|ZP_05175790.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|254716962|ref|ZP_05178773.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|256031472|ref|ZP_05445086.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|256159598|ref|ZP_05457360.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|256254878|ref|ZP_05460414.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
gi|256369305|ref|YP_003106813.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
gi|260168606|ref|ZP_05755417.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
gi|260566566|ref|ZP_05837036.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
gi|261218767|ref|ZP_05933048.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261222062|ref|ZP_05936343.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
gi|261314377|ref|ZP_05953574.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261317527|ref|ZP_05956724.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261321734|ref|ZP_05960931.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261752194|ref|ZP_05995903.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261758080|ref|ZP_06001789.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
gi|265988562|ref|ZP_06101119.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|265998027|ref|ZP_06110584.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|294852229|ref|ZP_06792902.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
gi|38258388|sp|Q8G146|SYR_BRUSU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|189083524|sp|A9MAQ0|SYR_BRUC2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|23347691|gb|AAN29805.1| arginyl-tRNA synthetase [Brucella suis 1330]
gi|161335648|gb|ABX61953.1| arginyl-tRNA synthetase [Brucella canis ATCC 23365]
gi|225617370|gb|EEH14415.1| arginyl-tRNA synthetase [Brucella ceti str. Cudo]
gi|255999465|gb|ACU47864.1| arginyl-tRNA synthetase [Brucella microti CCM 4915]
gi|260156084|gb|EEW91164.1| arginyl-tRNA synthetase [Brucella suis bv. 4 str. 40]
gi|260920646|gb|EEX87299.1| arginyl-tRNA synthetase [Brucella ceti B1/94]
gi|260923856|gb|EEX90424.1| arginyl-tRNA synthetase [Brucella ceti M13/05/1]
gi|261294424|gb|EEX97920.1| arginyl-tRNA synthetase [Brucella ceti M644/93/1]
gi|261296750|gb|EEY00247.1| arginyl-tRNA synthetase [Brucella pinnipedialis B2/94]
gi|261303403|gb|EEY06900.1| arginyl-tRNA synthetase [Brucella pinnipedialis M163/99/10]
gi|261738064|gb|EEY26060.1| arginyl-tRNA synthetase [Brucella sp. F5/99]
gi|261741947|gb|EEY29873.1| arginyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|262552495|gb|EEZ08485.1| arginyl-tRNA synthetase [Brucella ceti M490/95/1]
gi|264660759|gb|EEZ31020.1| arginyl-tRNA synthetase [Brucella pinnipedialis M292/94/1]
gi|294820818|gb|EFG37817.1| arginyl-tRNA synthetase [Brucella sp. NVSL 07-0026]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|28896469|ref|NP_802819.1| methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
gi|28811720|dbj|BAC64652.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes SSI-1]
Length = 666
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|256113415|ref|ZP_05454264.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|265994813|ref|ZP_06107370.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
gi|262765926|gb|EEZ11715.1| arginyl-tRNA synthetase [Brucella melitensis bv. 3 str. Ether]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|254796953|ref|YP_003081790.1| valyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
gi|254590200|gb|ACT69562.1| valyl-tRNA synthetase [Neorickettsia risticii str. Illinois]
Length = 878
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 15/65 (23%), Positives = 20/65 (30%), Gaps = 6/65 (9%)
Query: 8 YNTLERKITE----FQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
YN R + F + PT+ HIG+ D + R R
Sbjct: 15 YNCKTRWKEKQMYKFSPQYKDIFSIDTPPPTISGSLHIGHVFSYCHTDFIARYQRMRG-- 72
Query: 64 KCVTY 68
K V Y
Sbjct: 73 KNVFY 77
>gi|228477862|ref|ZP_04062476.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250352|gb|EEK09592.1| methionyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 667
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 43/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K+ Q + + ++ +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVSDEEF 133
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D G E K +K
Sbjct: 134 FTESQLAEVYRDEEGNVIGGVAPSGHEVELVSEESYFFKLSNYADRLTAFFKEHPEF 190
>gi|226194485|ref|ZP_03790083.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
gi|225933570|gb|EEH29559.1| methionine--tRNA ligase [Burkholderia pseudomallei Pakistan 9]
Length = 717
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSETIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y +
Sbjct: 133 YDPVRQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 179
>gi|153009679|ref|YP_001370894.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
gi|166232816|sp|A6X1G1|SYR_OCHA4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|151561567|gb|ABS15065.1| arginyl-tRNA synthetase [Ochrobactrum anthropi ATCC 49188]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|17987372|ref|NP_540006.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|256044550|ref|ZP_05447454.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|260563903|ref|ZP_05834389.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|265990976|ref|ZP_06103533.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
gi|23822196|sp|Q8YGR9|SYR_BRUME RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|17983059|gb|AAL52270.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|260153919|gb|EEW89011.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. 16M]
gi|263001760|gb|EEZ14335.1| arginyl-tRNA synthetase [Brucella melitensis bv. 1 str. Rev.1]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|254704184|ref|ZP_05166012.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261754853|ref|ZP_05998562.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
gi|261744606|gb|EEY32532.1| arginyl-tRNA synthetase [Brucella suis bv. 3 str. 686]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|251781887|ref|YP_002996189.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242390516|dbj|BAH80975.1| methionyl-tRNA synthetase [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 666
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 25/53 (47%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A + S
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAAEAGIS 67
>gi|227827837|ref|YP_002829617.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
gi|259511562|sp|C3MW97|SYM_SULIM RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|227459633|gb|ACP38319.1| methionyl-tRNA synthetase [Sulfolobus islandicus M.14.25]
Length = 573
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 72/277 (25%), Gaps = 26/277 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 10 PYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSG-----------SDEHGTPIE 58
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + + + L +
Sbjct: 59 IEAIKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVK 118
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 119 VSEDEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 178
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+P + W + S + P + +A ++ ++
Sbjct: 179 APIFKKSKHWFFDLSEFNEKIRS------WISSSNEMPDNVKSVALGWVSEGLKP--RSI 230
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ + + + + E L +
Sbjct: 231 TRDNKWGIPAPFIGAEDKSIYVWFEALLGYISAVIEY 267
>gi|163843148|ref|YP_001627552.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
gi|189083525|sp|B0CLK2|SYR_BRUSI RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|163673871|gb|ABY37982.1| arginyl-tRNA synthetase [Brucella suis ATCC 23445]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|62289822|ref|YP_221615.1| arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82699747|ref|YP_414321.1| arginyl-tRNA synthetase [Brucella melitensis biovar Abortus 2308]
gi|189024063|ref|YP_001934831.1| arginyl-tRNA synthetase [Brucella abortus S19]
gi|237815307|ref|ZP_04594305.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
gi|254689127|ref|ZP_05152381.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|254693610|ref|ZP_05155438.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|254697260|ref|ZP_05159088.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|254730159|ref|ZP_05188737.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|256257376|ref|ZP_05462912.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|260545431|ref|ZP_05821172.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
gi|260754626|ref|ZP_05866974.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260757849|ref|ZP_05870197.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260761672|ref|ZP_05874015.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260883653|ref|ZP_05895267.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|261213876|ref|ZP_05928157.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|297248226|ref|ZP_06931944.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
gi|75496922|sp|Q57DN0|SYR_BRUAB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|109894975|sp|Q2YNJ9|SYR_BRUA2 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|238689361|sp|B2S5B0|SYR_BRUA1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|62195954|gb|AAX74254.1| ArgS, arginyl-tRNA synthetase [Brucella abortus bv. 1 str. 9-941]
gi|82615848|emb|CAJ10852.1| Arginyl-tRNA synthetase, class Ic:Aminoacyl-tRNA synthetase, class
I:Arginyl tRNA synthetase N-terminal domain [Brucella
melitensis biovar Abortus 2308]
gi|189019635|gb|ACD72357.1| arginyl-tRNA synthetase [Brucella abortus S19]
gi|237790144|gb|EEP64354.1| arginyl-tRNA synthetase [Brucella abortus str. 2308 A]
gi|260096838|gb|EEW80713.1| arginyl-tRNA synthetase [Brucella abortus NCTC 8038]
gi|260668167|gb|EEX55107.1| arginyl-tRNA synthetase [Brucella abortus bv. 4 str. 292]
gi|260672104|gb|EEX58925.1| arginyl-tRNA synthetase [Brucella abortus bv. 2 str. 86/8/59]
gi|260674734|gb|EEX61555.1| arginyl-tRNA synthetase [Brucella abortus bv. 6 str. 870]
gi|260873181|gb|EEX80250.1| arginyl-tRNA synthetase [Brucella abortus bv. 9 str. C68]
gi|260915483|gb|EEX82344.1| arginyl-tRNA synthetase [Brucella abortus bv. 3 str. Tulya]
gi|297175395|gb|EFH34742.1| arginyl-tRNA synthetase [Brucella abortus bv. 5 str. B3196]
Length = 585
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 17/31 (54%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL LL++ +
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLKFAGYD 161
>gi|68475681|ref|XP_718047.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
gi|13591779|gb|AAK31350.1|AF352020_1 nuclear encoded mitochondrial leucyl-tRNA synthetase [Candida
albicans]
gi|46439795|gb|EAK99108.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
Length = 924
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 29/221 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R + DV+ R R V + D A E+ ++ N
Sbjct: 73 HIGHLRVYTISDVVARYKRSKGF--NVIHPMG---WD------AFGLPAENAAVERNINP 121
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
S T N + + + + + G AY EI
Sbjct: 122 SEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEIN 181
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP------MEPGWESP 207
+D + + + + + + + K + P W
Sbjct: 182 WDP-VDNTVLANEQVDAEGRSWRSGAIVEKRNLEQWFIGITKYAKELNRDLKNLPDWPEK 240
Query: 208 WGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFP 243
+ W E + + + + + D +F
Sbjct: 241 VKTMQKNWIGESNGVEINIPVNFPGLEHVTVFTSRPDTLFS 281
>gi|161528194|ref|YP_001582020.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
gi|160339495|gb|ABX12582.1| arginyl-tRNA synthetase [Nitrosopumilus maritimus SCM1]
Length = 628
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-TYV 69
HIG+ R +I+ D + R+L+ + V YV
Sbjct: 133 HIGHIRNIIIGDTISRILQKANYKVNVLNYV 163
>gi|154151464|ref|YP_001405082.1| leucyl-tRNA synthetase [Candidatus Methanoregula boonei 6A8]
gi|154000016|gb|ABS56439.1| leucyl-tRNA synthetase [Methanoregula boonei 6A8]
Length = 926
Score = 38.5 bits (88), Expect = 2.3, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 11/25 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYY 61
H+G+ R I DV+ R R
Sbjct: 42 GAMHVGHGRTYIAPDVIARFWRMRG 66
>gi|311266560|ref|XP_003131142.1| PREDICTED: cysteinyl-tRNA synthetase, mitochondrial-like [Sus
scrofa]
Length = 213
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 18/142 (12%), Positives = 40/142 (28%), Gaps = 49/142 (34%)
Query: 357 NDLNTVSAIQALHKLARESTKNHDLLP-----------------IFNASAHILGIEVCKE 399
+D NT A+ A+ +L + +GI + +
Sbjct: 62 DDFNTPRAVDAVVELIHHGNRELKAAAEEPRGPRSPAVLGALVSFVEQFFETVGISLAER 121
Query: 400 HLNK------NISIAIEKLVQERLILLKMKKFSS-----------------------ADY 430
+ +E+LV+ R + + F+ D
Sbjct: 122 QRAAGAGSPAALHSVVEELVRFRQTVRR---FALAAGEAAGEARRRQLQERRALLEACDA 178
Query: 431 IRKQLESKGFILEDYKNPDNGQ 452
+R+ L + G ++D + +
Sbjct: 179 LRRDLSAHGVRIKDRSDVSTWE 200
>gi|269962417|ref|ZP_06176767.1| chaperone protein HscA [Vibrio harveyi 1DA3]
gi|269832913|gb|EEZ87022.1| chaperone protein HscA [Vibrio harveyi 1DA3]
Length = 617
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 23/182 (12%), Positives = 50/182 (27%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G + + +F + P A + Y+ D + +
Sbjct: 431 TAMSVHTVQGEREMVEDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQSEIQVKPSYGLSDDEVANMLRDSMTY---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G E+ E +++ IE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDELLSEQEKQDLIKVIEALIELRNG-------EDADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|254503294|ref|ZP_05115445.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
gi|222439365|gb|EEE46044.1| methionyl-tRNA synthetase [Labrenzia alexandrii DFL-11]
Length = 508
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V HIG+A I+ D+L R E
Sbjct: 14 VNGSPHIGHAFTSIMADILKRNREALGYE 42
>gi|149195098|ref|ZP_01872190.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
gi|149134811|gb|EDM23295.1| arginyl-tRNA synthetase [Caminibacter mediatlanticus TB-2]
Length = 539
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I D L R+ R+ + Y N
Sbjct: 112 PT--GPLHIGHARGAIFGDALTRIGRHIGYKITTEYYVN 148
>gi|94987979|ref|YP_596080.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94991861|ref|YP_599960.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS2096]
gi|94541487|gb|ABF31536.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS9429]
gi|94545369|gb|ABF35416.1| Methionyl-tRNA synthetase / Protein secretion chaperonin CsaA
[Streptococcus pyogenes MGAS2096]
Length = 666
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|326389159|ref|ZP_08210739.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
gi|326206390|gb|EGD57227.1| leucyl-tRNA synthetase [Novosphingobium nitrogenifigens DSM
19370]
Length = 840
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 10/27 (37%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DVL R R E
Sbjct: 47 GRIHIGHVRNYTMGDVLARYKRMKGFE 73
>gi|323474905|gb|ADX85511.1| methionyl-tRNA synthetase [Sulfolobus islandicus REY15A]
gi|323477646|gb|ADX82884.1| methionyl-tRNA synthetase [Sulfolobus islandicus HVE10/4]
Length = 573
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 72/277 (25%), Gaps = 26/277 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 10 PYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSG-----------SDEHGTPIE 58
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + + + L +
Sbjct: 59 IEAIKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVK 118
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 119 VSEDEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 178
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+P + W + S + P + +A ++ ++
Sbjct: 179 APIFKKSKHWFFDLSEFNEKIRS------WISSSNEMPDNVKSVALGWVSEGLKP--RSI 230
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ + + + + E L +
Sbjct: 231 TRDNKWGIPAPFIGAEDKSIYVWFEALLGYISAVIEY 267
>gi|284998042|ref|YP_003419809.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
gi|284445937|gb|ADB87439.1| hypothetical protein LD85_1778 [Sulfolobus islandicus L.D.8.5]
Length = 585
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 28/277 (10%), Positives = 72/277 (25%), Gaps = 26/277 (9%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V H+GN ++ DV R R YG++ V +V + + I
Sbjct: 22 PYVNSVPHLGNLIGSILSADVFARYARLKYGKENVLFVSG-----------SDEHGTPIE 70
Query: 92 IN-----DAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
I +T + + + ++ + R + + + L +
Sbjct: 71 IEAIKRKVNPKELTDQAHEYDKHLFLNVWKISFDNYTRTESETHKKFVREFLLKLTKYVK 130
Query: 147 EANNEI-IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ +EI + + F + ++ + +
Sbjct: 131 VSEDEIPFCEYDKLYLPDRFVKGTCPYCGFEDARGDQCDNCGKLLTPSLLVNPKCSICGK 190
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+P + W + S + P + +A ++ ++
Sbjct: 191 APIFKKSKHWFFDLSEFNEKIRS------WISSSNEMPDNVKSVALGWVSEGLKP--RSI 242
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW 302
+ + + + + E L +
Sbjct: 243 TRDNKWGIPAPFIGAEDKSIYVWFEALLGYISAVIEY 279
>gi|229819468|ref|YP_002880994.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
gi|259511556|sp|C5C046|SYM_BEUC1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|229565381|gb|ACQ79232.1| methionyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
Length = 614
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 20/107 (18%), Positives = 35/107 (32%), Gaps = 13/107 (12%)
Query: 40 HIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIG+ + DV R +R + V V TD + I+ A QE +
Sbjct: 18 HIGHVAGFGVPSDVFSRYMRMAGHD--VLMVSG-TD-EHGTPILVLAEQEGVT------P 67
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG 143
+T + + V D L T + ++ + +
Sbjct: 68 QELTDRYNRVIVDDLANLGLSYDLFTRTTTRNHYAVVQEMFRTVHKN 114
>gi|222086010|ref|YP_002544542.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
gi|221723458|gb|ACM26614.1| methionyl-tRNA synthetase protein [Agrobacterium radiobacter K84]
Length = 517
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 42/132 (31%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R + V + +T D+ K+ + AR E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDG--RDVFF---LTGTDEHGQKMQQTARAEGLS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F L + H + + G Y+ + +
Sbjct: 69 PQELADRNSAEFQAMGKLLNSSNDDYIRTTEERHHETSRNIWNLMADAGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|257060679|ref|YP_003138567.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
gi|256590845|gb|ACV01732.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8802]
Length = 856
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ RL R
Sbjct: 49 HMGHVRNYVITDVIARLKRLQGY 71
>gi|153835373|ref|ZP_01988040.1| Fe-S protein assembly chaperone HscA [Vibrio harveyi HY01]
gi|148868095|gb|EDL67261.1| Fe-S protein assembly chaperone HscA [Vibrio harveyi HY01]
Length = 617
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 22/182 (12%), Positives = 51/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 431 TAMSVHTVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQAEIQVKPSYGLSDDEVANMLRDSMTY---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G E+ + +++ IE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDELLSDQEKQDLVKVIEALIELRNG-------EDADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|159903416|ref|YP_001550760.1| leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
gi|238687104|sp|A9BAE4|SYL_PROM4 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|159888592|gb|ABX08806.1| Leucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9211]
Length = 872
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 24/123 (19%), Positives = 42/123 (34%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R+ R V + D A E+ +I N
Sbjct: 63 HMGHVRNYVITDVIARVHRMKGF--SVLHPMG---WD------AFGLPAENAAIERNIQP 111
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEII 153
I T KN RL + + T + + + G AY+ + +
Sbjct: 112 DIWTEKNISHMRSQLDRLGLSIDWDREQTTSKSEYYKWTQSIFLKLYEAGLAYQKSATVN 171
Query: 154 FDT 156
+D
Sbjct: 172 WDP 174
>gi|330890057|gb|EGH22718.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. mori str.
301020]
Length = 499
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 53/171 (30%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDCIEASLAAINIKP-DNWMRPHNNPWFAEAVGEGFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELM 168
>gi|15674551|ref|NP_268725.1| methionyl-tRNA synthetase [Streptococcus pyogenes M1 GAS]
gi|13621657|gb|AAK33446.1| putative methionyl-tRNA synthetase [Streptococcus pyogenes M1
GAS]
Length = 666
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 67
>gi|312864247|ref|ZP_07724481.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311100248|gb|EFQ58457.1| methionine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 667
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 43/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K+ Q + + ++ +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVSDEEF 133
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D G E K +K
Sbjct: 134 FTESQLAEVYRDEQGNVIGGIAPSGHEVELVSEESYFFKLSNYADRLTAFFKEHPEF 190
>gi|59712361|ref|YP_205137.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
gi|68565957|sp|Q5E3Z7|SYM_VIBF1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|59480462|gb|AAW86249.1| methionyl-tRNA synthetase [Vibrio fischeri ES114]
Length = 686
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 45/426 (10%), Positives = 108/426 (25%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R + V ++ DD I+ +A+Q S
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGND--VNFIC----ADDAHGTPIMLKAQQMGISPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNE 151
+ I+ ++ + KD + ++ ++ I + +G
Sbjct: 72 -EMIAAVSEE----HQKDFAGFDISFDNYHSTHSDENRELASHIYLELKKNGFITSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWGR 210
+FD + + + + +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S + + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTRSGSLQSETANKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
S N + L ++ + + Y + +
Sbjct: 247 TNKFFYVWLDAPIGYMGSFKNLCNKRDDLNFDEYWKKDSTTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
+ + P G + + + A L+ L E + +
Sbjct: 306 ---PAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLNHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKF---------- 425
+ + + L +E + +N ++ I L + +R F
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFITKRFDGKLADNFVEPELYNEFI 422
Query: 426 SSADYI 431
++AD I
Sbjct: 423 AAADRI 428
>gi|71910158|ref|YP_281708.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
gi|25009390|sp|Q9A178|SYM_STRP1 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|71852940|gb|AAZ50963.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS5005]
Length = 665
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 18/53 (33%), Positives = 26/53 (49%), Gaps = 8/53 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
HIG+A I DVL R R E V Y +T +D+ KI +A++ +
Sbjct: 19 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGIT 66
>gi|30260228|ref|NP_842605.1| methionyl-tRNA synthetase [Bacillus anthracis str. Ames]
gi|47777767|ref|YP_016640.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49183072|ref|YP_026324.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|65317498|ref|ZP_00390457.1| COG0143: Methionyl-tRNA synthetase [Bacillus anthracis str. A2012]
gi|167635109|ref|ZP_02393426.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|167641535|ref|ZP_02399783.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|170688925|ref|ZP_02880127.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|170707587|ref|ZP_02898040.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|177655324|ref|ZP_02936853.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190569007|ref|ZP_03021908.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
gi|229600122|ref|YP_002864689.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
gi|254682335|ref|ZP_05146196.1| methionyl-tRNA synthetase [Bacillus anthracis str. CNEVA-9066]
gi|254724179|ref|ZP_05185964.1| methionyl-tRNA synthetase [Bacillus anthracis str. A1055]
gi|254733574|ref|ZP_05191295.1| methionyl-tRNA synthetase [Bacillus anthracis str. Western North
America USA6153]
gi|254744658|ref|ZP_05202337.1| methionyl-tRNA synthetase [Bacillus anthracis str. Kruger B]
gi|254762419|ref|ZP_05214261.1| methionyl-tRNA synthetase [Bacillus anthracis str. Australia 94]
gi|38258301|sp|Q81W03|SYM1_BACAN RecName: Full=Methionyl-tRNA synthetase 1; AltName:
Full=Methionine--tRNA ligase 1; Short=MetRS 1
gi|30253549|gb|AAP24091.1| methionine--tRNA ligase [Bacillus anthracis str. Ames]
gi|47551472|gb|AAT29115.2| methionyl-tRNA synthetase [Bacillus anthracis str. 'Ames Ancestor']
gi|49176999|gb|AAT52375.1| methionyl-tRNA synthetase [Bacillus anthracis str. Sterne]
gi|167510520|gb|EDR85918.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0193]
gi|167529583|gb|EDR92333.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0442]
gi|170127583|gb|EDS96457.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0389]
gi|170667149|gb|EDT17910.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0465]
gi|172080165|gb|EDT65258.1| methionyl-tRNA synthetase [Bacillus anthracis str. A0174]
gi|190559931|gb|EDV13915.1| methionyl-tRNA synthetase [Bacillus anthracis Tsiankovskii-I]
gi|229264530|gb|ACQ46167.1| methionine--tRNA ligase [Bacillus anthracis str. A0248]
Length = 660
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 19/129 (14%), Positives = 37/129 (28%), Gaps = 15/129 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKCMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ ++ H + + + ++ G Y E +
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYS 130
Query: 156 TSSIPNYGS 164
Y
Sbjct: 131 VQDETFYTE 139
>gi|218247996|ref|YP_002373367.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
gi|226695252|sp|B7JYA9|SYL_CYAP8 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|218168474|gb|ACK67211.1| leucyl-tRNA synthetase [Cyanothece sp. PCC 8801]
Length = 856
Score = 38.5 bits (88), Expect = 2.4, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ RL R
Sbjct: 49 HMGHVRNYVITDVIARLKRLQGY 71
>gi|307707754|ref|ZP_07644233.1| glutamyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
gi|307616252|gb|EFN95446.1| glutamyl-tRNA synthetase [Streptococcus mitis NCTC 12261]
Length = 486
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 45/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLDLYQKFIDQLLVEGKAYKSYVTEEELATERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|325963359|ref|YP_004241265.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
gi|323469446|gb|ADX73131.1| leucyl-tRNA synthetase [Arthrobacter phenanthrenivorans Sphe3]
Length = 842
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 18 FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F +D R YV Y H+G+A + DV+ R LR +
Sbjct: 44 FTPVDDGSRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYD 92
>gi|237742263|ref|ZP_04572744.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|229429911|gb|EEO40123.1| methionyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
Length = 636
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + T+ T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---THFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDMVNAKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 243 DKKFDKFWNNARVVHLIGKDI 263
>gi|187934680|ref|YP_001884366.1| methionyl-tRNA synthetase [Clostridium botulinum B str. Eklund 17B]
gi|187722833|gb|ACD24054.1| methionine--tRNA ligase [Clostridium botulinum B str. Eklund 17B]
Length = 645
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 19/150 (12%), Positives = 37/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R E V +T D+ KI A ++ +
Sbjct: 23 HIGNTYTTVAADALARFKRLTGYE-----VMFLTGTDEHGQKIQRIAEEKGIT------P 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + G Y+
Sbjct: 72 IEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSSYEGWYC 131
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 132 TPCESFWTDTQLVNGNCPDCGRPVEKSKEE 161
>gi|116671696|ref|YP_832629.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
gi|116611805|gb|ABK04529.1| arginyl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 585
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
P V H+G+ R +V D L R+L
Sbjct: 115 PNVAKEMHVGHLRTTVVGDSLVRVLEALGH 144
>gi|218259406|ref|ZP_03475150.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
DSM 18315]
gi|218225135|gb|EEC97785.1| hypothetical protein PRABACTJOHN_00807 [Parabacteroides johnsonii
DSM 18315]
Length = 679
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 59/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E + I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGISFDIYSRTTSATHRQVASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + + K + K+
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLIDPKSAISGSQPVMKETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRQWILEGHKEWKPNVYGQC 222
>gi|315426742|dbj|BAJ48366.1| arginyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 624
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 7/39 (17%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCV-TYVRNITDIDD 77
HIG+AR + + D L RLL+ V Y IDD
Sbjct: 128 HIGHARNVCLGDSLARLLKKNGYHVAVANY------IDD 160
>gi|313681372|ref|YP_004059110.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
gi|313154232|gb|ADR32910.1| arginyl-tRNA synthetase [Sulfuricurvum kujiense DSM 16994]
Length = 526
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D + RL R+ + Y N
Sbjct: 114 PT--GPLHIGHARGAVYGDTMLRLGRHLGYDITAEYYVN 150
>gi|294783391|ref|ZP_06748715.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
gi|294480269|gb|EFG28046.1| leucine--tRNA ligase [Fusobacterium sp. 1_1_41FAA]
Length = 859
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGI------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|237739547|ref|ZP_04570028.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
gi|229423155|gb|EEO38202.1| leucyl-tRNA synthetase [Fusobacterium sp. 2_1_31]
Length = 859
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGI------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|194246768|ref|YP_002004407.1| methionyl-tRNA synthetase [Candidatus Phytoplasma mali]
gi|193807125|emb|CAP18563.1| Methiony-tRNA synthetase [Candidatus Phytoplasma mali]
Length = 517
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 61/458 (13%), Positives = 130/458 (28%), Gaps = 103/458 (22%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D H+GN +++ D L R R + V + T D+ KI ++++ N
Sbjct: 24 DIPHVGNVYEVVLADFLARFKRLEGYD--VYFQ---TGTDEHGQKIFQKSK------SKN 72
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEI 152
+Q+ + + + NH + ++ + Y E
Sbjct: 73 QKPQTYVDYFSQEIRRIYDLMNVSYDKFIRTSDENHKKSVQSVLDKLYQKKDIYLGKYEG 132
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGR 212
+ + + ++ + F L K + ++ R
Sbjct: 133 FYSVIEESYVLEK---DLVNGLTKSGEIPIWNSEEVYFFKLSKYQKKLYDFLKNDSVLIR 189
Query: 213 PGWHIE-----------CSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIE-- 259
P + ++ + +++ ++ + + +
Sbjct: 190 PVNKKQEILNLLKEPLPDLCITRTFCKYGINLNFNSQHFVYVWVDALLNYITGLNYHPDL 249
Query: 260 --------------------------------------KTANIWIHNGFLNLEGRKMSKS 281
I+ + F+ + KMSKS
Sbjct: 250 PKSKEFLKYWPCDIHIIGKDIIRFHLVHFLILLISLELPLPKIFFVHPFILFDKNKMSKS 309
Query: 282 NGNFITINELLETKKFGGRSWPAPV---------IRLAMLMTHYREPIDFTVQRLTEAEI 332
GN + I++LL+T + I +L + + T+ L +
Sbjct: 310 KGNVLYIDDLLKTFSVDTIRYFMLHEIPYNQDGNITHELLRERHNTDLANTIGNLLNRTL 369
Query: 333 LLSKWPQTSTSKGIIDPAVLSAL---------------YNDLNTVSAIQALHKLARESTK 377
+ K + K +I P +L + + AI+ + +LAR S K
Sbjct: 370 GMLKAYRNGHLKKVILPEILEIDLSKKSLEALPLIQKKVFNFHISDAIEVIIQLARFSNK 429
Query: 378 NHDLLP---IFNASAHILGIEVCKEHLNKNISIAIEKL 412
DL +F S ++ L+ + IE L
Sbjct: 430 YIDLAKPWILFKESDK-------QDVLDHVLYSLIETL 460
>gi|148251789|ref|YP_001236374.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
gi|166230612|sp|A5E8H4|SYL_BRASB RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|146403962|gb|ABQ32468.1| leucyl-tRNA synthetase [Bradyrhizobium sp. BTAi1]
Length = 874
Score = 38.5 bits (88), Expect = 2.5, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DVL R +R
Sbjct: 47 GRIHIGHVRNYTLGDVLARFMRAKGFN 73
>gi|291461006|ref|ZP_06026392.2| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
gi|291379583|gb|EFE87101.1| leucine--tRNA ligase [Fusobacterium periodonticum ATCC 33693]
Length = 862
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 52 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGI------HP 100
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 101 AIWTKSNIENMRRQLKLIGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 160
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 161 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 220
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 221 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 259
>gi|258647690|ref|ZP_05735159.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
gi|260852523|gb|EEX72392.1| methionine--tRNA ligase [Prevotella tannerae ATCC 51259]
Length = 680
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 39/157 (24%), Gaps = 24/157 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR K V ++ IT RAR+EH +
Sbjct: 23 HIGHLAGVYIPSDIYARYLRLR--NKPVLFICGSDEHGVPIT-------IRARREHCT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + H + + G E +
Sbjct: 72 ----PQDVVDRYHKLIKDSFEAFGISFDIYSRTTSAVHEKTATEFFRTLYDKGEFIEKES 127
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D + +
Sbjct: 128 EQYYDEEAKTFLADRYITGECPHCHKPGAYGDQCENC 164
>gi|327542711|gb|EGF29180.1| arginyl-tRNA synthetase [Rhodopirellula baltica WH47]
Length = 671
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
P V H+G+ R ++ D L R LR+ YGE VT
Sbjct: 124 PNVAKPMHVGHIRSTVIGDCLARTLRF-YGEDVVT 157
>gi|150402195|ref|YP_001329489.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
gi|166232804|sp|A6VFW2|SYR_METM7 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|150033225|gb|ABR65338.1| arginyl-tRNA synthetase [Methanococcus maripaludis C7]
Length = 566
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L + Y N
Sbjct: 128 HIGHGRNMVIGDSLKRILVASGYDVETQYYVN 159
>gi|126459772|ref|YP_001056050.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
gi|187647758|sp|A3MVB7|SYM_PYRCJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|126249493|gb|ABO08584.1| methionyl-tRNA synthetase [Pyrobaculum calidifontis JCM 11548]
Length = 570
Score = 38.5 bits (88), Expect = 2.6, Method: Composition-based stats.
Identities = 26/172 (15%), Positives = 46/172 (26%), Gaps = 21/172 (12%)
Query: 29 YVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKII 80
YV G P V H+GN ++ DV R LR + V +V T I
Sbjct: 4 YVIGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHD--VVFVSGSDMHGTPI----- 56
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNI 139
E +I + + K + R + H+ + + I
Sbjct: 57 -----EVEAIQLGVDPAEYAFKMHGVVAELFKRWNISFDLYTHTHSETHVAFVQEFFKRI 111
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G+ + + E+ + R +
Sbjct: 112 YENGYIFTKDEEMPYCPRDKIFLPDRFIIGKCPYCGYERARGDQCENCGRLL 163
>gi|304382941|ref|ZP_07365423.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
gi|304335966|gb|EFM02214.1| methionine--tRNA ligase [Prevotella marshii DSM 16973]
Length = 681
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 26/171 (15%), Positives = 51/171 (29%), Gaps = 31/171 (18%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ I D+ R LR E V ++ IT RAR+E +
Sbjct: 23 HIGHLAGVYIPSDIYARYLRLKGEE--VAFICGSDEHGVPIT-------IRARKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + K R T+ ++
Sbjct: 72 ----PQDVVDRYHTLIKKSFEDFGIS-FDIYSRTTSETH------NRFASDFFRKLYDDG 120
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEP 202
+ + +S Y + + + ++ + P +H+ D K + ++P
Sbjct: 121 KLMEKTSRQYYDEEAHQFLADRYITGECPHCHHQGAYGDQC-EKCGSDLDP 170
>gi|146337356|ref|YP_001202404.1| leucyl-tRNA synthetase [Bradyrhizobium sp. ORS278]
gi|166230613|sp|A4YJS8|SYL_BRASO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|146190162|emb|CAL74154.1| leucine tRNA synthetase [Bradyrhizobium sp. ORS278]
Length = 874
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DVL R +R
Sbjct: 47 GRIHIGHVRNYTLGDVLARFMRAKGFN 73
>gi|147920891|ref|YP_685302.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
gi|121688069|sp|Q0W6L7|SYR_UNCMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|110620698|emb|CAJ35976.1| arginyl-tRNA synthetase [uncultured methanogenic archaeon RC-I]
Length = 563
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PT H+G R I+ D L RLLR + V Y +DD
Sbjct: 121 PT--GPLHVGRGRNPIIGDTLARLLRAGGYDLEVQY-----YVDD 158
>gi|32473878|ref|NP_866872.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
gi|39932074|sp|Q7URC7|SYR_RHOBA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|32444414|emb|CAD74413.1| arginyl-tRNA synthetase [Rhodopirellula baltica SH 1]
Length = 671
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
P V H+G+ R ++ D L R LR+ YGE VT
Sbjct: 124 PNVAKPMHVGHIRSTVIGDCLARTLRF-YGEDVVT 157
>gi|317506273|ref|ZP_07964089.1| hypothetical protein HMPREF9336_00458 [Segniliparus rugosus ATCC
BAA-974]
gi|316255431|gb|EFV14685.1| hypothetical protein HMPREF9336_00458 [Segniliparus rugosus ATCC
BAA-974]
Length = 304
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 10/34 (29%), Positives = 18/34 (52%), Gaps = 3/34 (8%)
Query: 426 SSADYIRKQLESKGFILEDYKNPDNGQRMTRWKQ 459
AD +R++L + G I K+ + QR+ W +
Sbjct: 65 KIADELRQELAALGVI---GKDGEIDQRVATWVR 95
>gi|288917103|ref|ZP_06411473.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp.
EUN1f]
gi|288351472|gb|EFC85679.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp.
EUN1f]
Length = 886
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R E V Y DD
Sbjct: 56 PTVSGSLHVGHVFSYTHTDLIARFQRMRGRE--VFYPMGF---DD 95
>gi|188588457|ref|YP_001919550.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
gi|188498738|gb|ACD51874.1| methionyl-tRNA synthetase [Clostridium botulinum E3 str. Alaska
E43]
Length = 645
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 37/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A ++ +
Sbjct: 23 HIGNTYTTVAADALARFKRLTGYD-----VMFLTGTDEHGQKIQRIAEEKGIT------P 71
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + G Y+
Sbjct: 72 IEHVDEIVAGIKDLWSMMNVSYDKFIRTTDDYHVKAVQDIFKKLHDQGDIYKSSYEGWYC 131
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 132 TPCESFWTDTQLVNGNCPDCGRPVEKSKEE 161
>gi|158316956|ref|YP_001509464.1| valyl-tRNA synthetase [Frankia sp. EAN1pec]
gi|158112361|gb|ABW14558.1| tRNA synthetase valyl/leucyl anticodon-binding [Frankia sp.
EAN1pec]
Length = 876
Score = 38.1 bits (87), Expect = 2.6, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R E V Y DD
Sbjct: 56 PTVSGSLHVGHVFSYTHTDLIARFQRMRGRE--VFYPMGF---DD 95
>gi|302767176|ref|XP_002967008.1| hypothetical protein SELMODRAFT_168869 [Selaginella moellendorffii]
gi|300164999|gb|EFJ31607.1| hypothetical protein SELMODRAFT_168869 [Selaginella moellendorffii]
Length = 347
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 19/35 (54%)
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
V++R + + + AD +++Q+ G+ + D +
Sbjct: 195 VEKRRRARENRDYKKADMLQQQIFDAGYKVFDGRG 229
>gi|302418792|ref|XP_003007227.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
gi|261354829|gb|EEY17257.1| methionyl-tRNA synthetase [Verticillium albo-atrum VaMs.102]
Length = 620
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 22/164 (13%), Positives = 45/164 (27%), Gaps = 9/164 (5%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V H+G+ MI+ D L R + Y TD + + +
Sbjct: 77 VNASPHVGHMYTMILADSLKRWQTLRGRDAL--YCTG-TD-----EHGMKVQRAAAKQGI 128
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
N +F + +H+ + + + GH YE+ +
Sbjct: 129 PPKAFCDNNADKFRQLAAACGIDNDFFVRTTDADHMDAVQHFWHLLRAGGHVYESTHSGW 188
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRS 197
+ S Y + + G + + ++ K
Sbjct: 189 YCVSDECFYAEDEVERAIVPQTGRTIMASIATGSEVEWTEEKNY 232
>gi|256846013|ref|ZP_05551471.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256719572|gb|EEU33127.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 859
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|302660650|ref|XP_003022002.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
gi|291185926|gb|EFE41384.1| hypothetical protein TRV_03896 [Trichophyton verrucosum HKI 0517]
Length = 975
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DVL R + + V + D A E+ +I
Sbjct: 92 HMGHVRVYTISDVLARFKQMKGYD--VLHPMG---WD------AFGLPAENAAIERGIHP 140
Query: 97 SIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
T +N L + L + G AY+A +
Sbjct: 141 EGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVVN 200
Query: 154 FDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + G +V ++ K+ +K
Sbjct: 201 YDPVDKTVLANEQVDSNGCSWRSGAKVEKRELKQWFFRITAFK 243
>gi|302510571|ref|XP_003017237.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
gi|291180808|gb|EFE36592.1| hypothetical protein ARB_04114 [Arthroderma benhamiae CBS 112371]
Length = 975
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/163 (15%), Positives = 45/163 (27%), Gaps = 18/163 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DVL R + + V + D A E+ +I
Sbjct: 92 HMGHVRVYTISDVLARFKQMKGYD--VLHPMG---WD------AFGLPAENAAIERGIHP 140
Query: 97 SIITSKNTQQFVKDTTRLAC---LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
T +N L + L + G AY+A +
Sbjct: 141 EGWTKQNIANMRNQLKDLGIRFDWDTEVMTCSPEFYKHTQKLFLMLHEKGLAYQAEAVVN 200
Query: 154 FDT-SSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK 195
+D + G +V ++ K+ +K
Sbjct: 201 YDPVDKTVLANEQVDSNGCSWRSGAKVEKRELKQWFFRITAFK 243
>gi|194476818|ref|YP_002048997.1| arginyl-tRNA synthetase [Paulinella chromatophora]
gi|171191825|gb|ACB42787.1| arginyl-tRNA synthetase [Paulinella chromatophora]
Length = 602
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 8/33 (24%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R ++ D L R+L + + +V
Sbjct: 146 DMHVGHLRSTLIGDCLARILEFRGYNVLRLNHV 178
>gi|170758335|ref|YP_001785405.1| methionyl-tRNA synthetase [Clostridium botulinum A3 str. Loch
Maree]
gi|169405324|gb|ACA53735.1| methionine--tRNA ligase [Clostridium botulinum A3 str. Loch Maree]
Length = 645
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 60/453 (13%), Positives = 108/453 (23%), Gaps = 99/453 (21%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A E +
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAEKVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+ +
Sbjct: 69 KAYVDEIVAGIKDLWKIMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQ---------------------------KMGTRVPEKYHKK 186
S K + + + +K
Sbjct: 129 TPCESFWTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQPESRK 188
Query: 187 NPADFILWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMS 223
N K + + G P G++ E +
Sbjct: 189 NEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNTENDELY 248
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
Y D+H G D++ H D +G+L ++G KMSKS G
Sbjct: 249 KKYW--PADVHLVGKDILRFHTIYWPIMLMALD--IPLPKQVFGHGWLLVDGGKMSKSKG 304
Query: 284 NFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTE 329
N + L+ + + + + + + +
Sbjct: 305 NVVDPVVLVNHFGADPVRYYLLREIPFGADGMFNNEIFIKKINSDLANDLGNLLSRTVAM 364
Query: 330 AEILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
E K ID P + L A++ + + K
Sbjct: 365 IEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEEDMEKLRIPEALEEIWTFIGRANKYI 424
Query: 380 DLLPIFNASAHILGIEVCKEHLNKNISIAIEKL 412
D + + E KE L + +E L
Sbjct: 425 DETTPWVLAKD----ESKKERLGTVLYNLVESL 453
>gi|145591530|ref|YP_001153532.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|187647757|sp|A4WKG3|SYM_PYRAR RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|145283298|gb|ABP50880.1| methionyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 570
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 28/172 (16%), Positives = 46/172 (26%), Gaps = 21/172 (12%)
Query: 29 YVCG---PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNI----TDIDDKII 80
YV G P V H+GN ++ DV R LR E V +V T I
Sbjct: 4 YVVGSAWPYVQTVPHLGNMIGSVLSADVYARYLRLRGHE--VVFVSGSDMHGTPI----- 56
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNI 139
E +I + + K Q + R + HI + +
Sbjct: 57 -----EVEAIQLGVDPADYALKMHQIVAELFRRWDISFDLYTHTHSETHIKFVQEFFARV 111
Query: 140 ILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+G + ++E+ + R +
Sbjct: 112 YENGFIFTRDDEVPYCPRDKIYLPDRFVIGKCPYCGYERARGDQCENCGRLL 163
>gi|68475816|ref|XP_717981.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
gi|46439720|gb|EAK99034.1| potential Leucyl-tRNA synthetase [Candida albicans SC5314]
Length = 924
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 29/221 (13%), Positives = 57/221 (25%), Gaps = 29/221 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
HIG+ R + DV+ R R V + D A E+ ++ N
Sbjct: 73 HIGHLRVYTISDVVARYKRSKGF--NVIHPMG---WD------AFGLPAENAAVERNINP 121
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANNEII 153
S T N + + + + + G AY EI
Sbjct: 122 SEWTETNIAKMKNQMETFLADFDWQREVNTSSPEYYKWTQKIFLMLFERGLAYRKAAEIN 181
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP------MEPGWESP 207
+D + + + + + + + K + P W
Sbjct: 182 WDP-VDNTVLANEQVDAEGRSWRSGAIVEKRNLEQWFIGITKYAKELNRDLKNLPDWPEK 240
Query: 208 WGRGRPGWHIECSAMSSHY-----LGKVFDIHGGGLDLIFP 243
+ W E + + + + + D +F
Sbjct: 241 VKTMQKNWIGESNGVEINIPVNFPGLEHVTVFTSRPDTLFS 281
>gi|306826321|ref|ZP_07459655.1| glutamate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
gi|304431597|gb|EFM34579.1| glutamate--tRNA ligase [Streptococcus sp. oral taxon 071 str.
73H25AP]
Length = 486
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
+ + + + E++ +P N A W +
Sbjct: 119 QEASGETPRYINEYLGMSEEEKAAYVAEREAAGIIPTVRLAVNEAGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLATIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|294784860|ref|ZP_06750148.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
gi|294486574|gb|EFG33936.1| leucine--tRNA ligase [Fusobacterium sp. 3_1_27]
Length = 859
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|223558006|gb|ACM91012.1| methionyl-tRNA synthetase [uncultured bacterium URE4]
Length = 724
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 39/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ I D+ R LR + V +V IT I RA+
Sbjct: 18 GPVHIGHLAGAYIPGDIYVRYLRLRGED--VVFVCGSDEHGVPIT-----IKARAQ---- 66
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
I + Q T L R T+ H + + +
Sbjct: 67 ----GVTPQDIVDQYHQVMKDAFTGLGI-NFDIYSRTTSDVHDKTASEFFRKLYDNDKFI 121
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +D + + +K
Sbjct: 122 TKETEQYYDEEAKTFLADRYIVGTCPKCGNPGAYGDQCEKC 162
>gi|320094120|ref|ZP_08025933.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
gi|319978922|gb|EFW10452.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 178 str. F0338]
Length = 909
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV HIG+ DV+ R R + V Y DD
Sbjct: 59 PTVSGSLHIGHVFSYTHTDVVARFQRMRG--RAVFYPMG---WDD 98
>gi|254700451|ref|ZP_05162279.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261750952|ref|ZP_05994661.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
gi|261740705|gb|EEY28631.1| leucyl-tRNA synthetase [Brucella suis bv. 5 str. 513]
Length = 877
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 20/150 (13%), Positives = 44/150 (29%), Gaps = 11/150 (7%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V + D E+ ++
Sbjct: 47 GRIHMGHARNYAMGDVVARYKRAKGF--NVLHPMG---WD---AFGMPAENAAMQNKVHP 98
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
T +N + + + AT + + L ++ G +++
Sbjct: 99 KEWTYQNIATMKRQLKSMGLSLDWSREFATCDVEYYHRQQMLFIDLYEKGLVTRKTSKVN 158
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+D + + G V ++
Sbjct: 159 WDPVDNTVLANEQVVDGRGWRSGALVEQRE 188
>gi|19704849|ref|NP_602344.1| leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
gi|32171570|sp|Q8RIQ3|SYL_FUSNN RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|19712730|gb|AAL93643.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. nucleatum
ATCC 25586]
Length = 859
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|87124459|ref|ZP_01080308.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
gi|86168031|gb|EAQ69289.1| leucyl-tRNA synthetase [Synechococcus sp. RS9917]
Length = 876
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 20/97 (20%), Positives = 32/97 (32%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R R V + D A E+ +I
Sbjct: 64 HMGHVRNYVITDVIARAQRMRG--DAVLHPMG---WD------AFGLPAENAAIERGVNP 112
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
+ T +N Q RL + +AT H
Sbjct: 113 ADWTDRNIAQMKAQLNRLGLSIDWEREQATCHDDYYR 149
>gi|322390352|ref|ZP_08063879.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
gi|321142953|gb|EFX38404.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 903]
Length = 485
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGVIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D + + N+ + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDEHRLSKSPAA-FDQKKMDWMSNEYIKNADLATIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D F
Sbjct: 348 LEEAGRLTDKAEKFVEL 364
>gi|296328927|ref|ZP_06871435.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
gi|296153916|gb|EFG94726.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. nucleatum ATCC
23726]
Length = 859
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|237742619|ref|ZP_04573100.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
gi|229430267|gb|EEO40479.1| leucyl-tRNA synthetase [Fusobacterium sp. 4_1_13]
Length = 859
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|123967796|ref|YP_001008654.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
gi|166229756|sp|A2BP36|SYI_PROMS RecName: Full=Isoleucyl-tRNA synthetase; AltName:
Full=Isoleucine--tRNA ligase; Short=IleRS
gi|123197906|gb|ABM69547.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. AS9601]
Length = 968
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 82/255 (32%), Gaps = 15/255 (5%)
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ N+I+ ++ I + + V +K + LWK+ T W
Sbjct: 498 KKNGNDILLNSEIINHIQELFSEHGADIWWDWDVKNLLPEKYARESDLWKKGTDTMDVWF 557
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
W C S L D++ G D ++ + S + +
Sbjct: 558 DSGS----SWAAVCELRSE--LKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVL 611
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
H L+ GRKMSKS GN + N ++ K ++ A V+RL + Y +
Sbjct: 612 THGFALDENGRKMSKSLGNVVDPNIIINGGNNKKTEPAYGADVLRLWVSSVDYSVDVPIG 671
Query: 324 VQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L + + K T + + L + L ++ + +
Sbjct: 672 SNILKQLADVYRKVRNTARYLLGNIHDYDPNIDSYEIDQLPLLDQWMLGRLVEVTDQISN 731
Query: 378 NHDLLPIFNASAHIL 392
++ F+ IL
Sbjct: 732 AYENYE-FSKFFQIL 745
>gi|99034770|ref|ZP_01314694.1| hypothetical protein Wendoof_01000481 [Wolbachia endosymbiont of
Drosophila willistoni TSC#14030-0811.24]
Length = 808
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 82/317 (25%), Gaps = 32/317 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R + DV+ R R E V + I A E+ + N +
Sbjct: 12 IHMGHLRNYAIGDVIARYKRANGFE--VLH---------PIGWDAFGLPAENAARDNNIS 60
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI 152
T +N + + +T + + + HG AY + +
Sbjct: 61 PETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAYRKESWV 120
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRSTPMEPGWESP 207
+D + + G V ++ + L K ++ W
Sbjct: 121 NWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLK-NWPEK 179
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+ W + + + +V ++ H A C +
Sbjct: 180 VKTMQERWIGKSEGATIEF--EVVGLNKKLKVFTTYPHTLFGASFCAVAAEHPIVQDLKN 237
Query: 268 NGFLN-------LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
+ ++ K + N I + L K I +LM + I
Sbjct: 238 GSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLMEYGEGAI 297
Query: 321 DFTVQRLTEAEILLSKW 337
K+
Sbjct: 298 FGCPAHDQRDFEFAQKY 314
>gi|86159149|ref|YP_465934.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
gi|85775660|gb|ABC82497.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-C]
Length = 858
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + D L R LR +
Sbjct: 74 GAMHMGHARVYTIGDALARHLRMRGFD 100
>gi|82539458|ref|XP_724116.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii str. 17XNL]
gi|23478651|gb|EAA15681.1| methionyl-tRNA synthetase [Plasmodium yoelii yoelii]
Length = 882
Score = 38.1 bits (87), Expect = 2.7, Method: Composition-based stats.
Identities = 29/186 (15%), Positives = 55/186 (29%), Gaps = 15/186 (8%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +I+ D + R R + T T D+ KI +A +
Sbjct: 229 VNGEPHIGHAYEIILADAIARYHRNLGRDIFFT-----TGADEHGLKIANQALRN----- 278
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYEANN 150
N + N +F K L + + H + + +G Y
Sbjct: 279 -NMTPQELCDLNVIKFKKLNKDLHTTEDYYVRTTADIHKKIAQSIWMKCVENGDIYLGEY 337
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
E ++ + ++ V + K+ F + K +
Sbjct: 338 EGWYNVREETYIPENEAKLMNYIDPLNNVKLEKMKEPSYFFRMSKYQDRLLQYIHDNPDF 397
Query: 211 GRPGWH 216
+P +
Sbjct: 398 IQPEKN 403
>gi|288940932|ref|YP_003443172.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
gi|288896304|gb|ADC62140.1| methionyl-tRNA synthetase [Allochromatium vinosum DSM 180]
Length = 683
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 23/150 (15%), Positives = 44/150 (29%), Gaps = 14/150 (9%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
HIG+ I D+ R + YV DD I+ RARQE +
Sbjct: 18 GPIHIGHLVEYIQTDIWARFQKMRGHNCW--YVC----ADDAHGTPIMLRARQEGITPE- 70
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
I+ + ++ F TH P ++ + ++ A +
Sbjct: 71 -QLIARVAEEHQADFAAFRVGFDNYHSTHSPENQHYATLIYERNRDAG--HIAKRMITQA 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ F + + + + +
Sbjct: 128 YDPVEQMFLPDRFIKGECPKCGAPDQYGDN 157
>gi|220917741|ref|YP_002493045.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955595|gb|ACL65979.1| methionyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 694
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 31/250 (12%), Positives = 64/250 (25%), Gaps = 38/250 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSI------ 90
H+G+ + DV R R V YV A H +
Sbjct: 16 GPIHLGHLVEYVQTDVYVRFRRACG--DDVAYV------------CAADSHGTPIEVNAA 61
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ K + D T+ ++ + + A
Sbjct: 62 KVGMTPKAFVEKYRAEQHADFHAFGVEFSTYYTTDSD---ENRRWAYRVYDALKAK---- 114
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGR 210
+I+ S Y RR + ++ + P+ D +T + P+
Sbjct: 115 GLIYKKSVEQLYCEVDRRFLPDRFVKGTCPKCGTPDQYGDVCEHCGTTYDPRELKDPYCA 174
Query: 211 GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGF 270
C + ++ D+ HE A+ +E +
Sbjct: 175 I-------CRSSPVVRASDHAYVNLRKPDVNAVIHEWVNAE----GHLEPAVREQVKGWL 223
Query: 271 LNLEGRKMSK 280
+L+ +++
Sbjct: 224 ADLQDWCITR 233
>gi|254469368|ref|ZP_05082773.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
gi|211961203|gb|EEA96398.1| arginyl-tRNA synthetase [Pseudovibrio sp. JE062]
Length = 584
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT H+G+ R +V D L LL++ + YV N
Sbjct: 132 PT--GPMHVGHTRGAVVGDALASLLQFAGYDVTREYVIN 168
>gi|34763278|ref|ZP_00144237.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
gi|27887049|gb|EAA24161.1| Leucyl-tRNA synthetase [Fusobacterium nucleatum subsp. vincentii
ATCC 49256]
Length = 862
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 52 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 100
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 101 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 160
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 161 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYVDELLEGHEEIKDGWPEK 220
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 221 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 259
>gi|302755152|ref|XP_002961000.1| hypothetical protein SELMODRAFT_74165 [Selaginella moellendorffii]
gi|300171939|gb|EFJ38539.1| hypothetical protein SELMODRAFT_74165 [Selaginella moellendorffii]
Length = 347
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 7/35 (20%), Positives = 19/35 (54%)
Query: 413 VQERLILLKMKKFSSADYIRKQLESKGFILEDYKN 447
V++R + + + AD +++Q+ G+ + D +
Sbjct: 195 VEKRRRARENRDYKKADMLQQQIFDAGYKVFDGRG 229
>gi|27375738|ref|NP_767267.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
gi|32171529|sp|Q89WQ1|SYL_BRAJA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|27348876|dbj|BAC45892.1| leucyl-tRNA synthetase [Bradyrhizobium japonicum USDA 110]
Length = 874
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DVL R +R
Sbjct: 47 GRIHIGHVRNYTLGDVLARFMRAKGFN 73
>gi|159107898|ref|XP_001704224.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
gi|157432280|gb|EDO76550.1| Methionyl-tRNA synthetase [Giardia lamblia ATCC 50803]
Length = 582
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 42/142 (29%), Gaps = 10/142 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+ ++ D L R + E TY+ TD + + + +
Sbjct: 15 VNGKPHIGHVFTTLLADTLKRFRKLQGFE---TYLMTGTD-----EHGQKVQQSAEKMGL 66
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
+ F L P R T H+ L + + G Y+ E
Sbjct: 67 QPQQWCDNMAKTFETYFLENFGLCPDVFMRTTMPKHVEMATKLWEKLRTAGLIYKDKYEG 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQK 174
+ + + + + +
Sbjct: 127 WYCVADEAFVTETNLKDGVDAQ 148
>gi|326506112|dbj|BAJ91295.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326508614|dbj|BAJ95829.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 434
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 17/38 (44%)
Query: 403 KNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
+ I+K +R + + +AD ++K + G+
Sbjct: 267 SDAPSEIKKAAADRTKARAARNYPTADALQKTIADAGY 304
>gi|295107808|emb|CBL21761.1| methionyl-tRNA synthetase [Ruminococcus obeum A2-162]
Length = 652
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 19 PHIGNTYEIVLADAIARYKRQEGYD--VFFQ---TGTDEHGQKIELKAEEAGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + + + +H Q+ + + + G Y+ + E ++
Sbjct: 68 PKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKGHYEGMY 127
Query: 155 DTSSIPNYGS 164
T +
Sbjct: 128 CTPCESFFTE 137
>gi|291545198|emb|CBL18307.1| methionyl-tRNA synthetase [Ruminococcus sp. 18P13]
Length = 647
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 49/412 (11%), Positives = 95/412 (23%), Gaps = 67/412 (16%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN ++ D + R R + V + +T D+ KI E A+ E + +
Sbjct: 19 PHIGNTYEVVFTDAVARYKRMQGYD--VFF---LTGTDEHGVKIEELAKSEGITPKEHVD 73
Query: 96 ---------------------------ISIITSKNTQQFVKDTTRLACLAPTHQPR---- 124
+ K ++
Sbjct: 74 KVVGEIQDICKLMHISYDGFIRTTDPRHEEVVQKIFKKLYDQGDIYKSEYEGMYCTPCES 133
Query: 125 --------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKI 170
+ + L + I I G
Sbjct: 134 FWTPSQLVDGKCPDCGREVQPAKEEAYFLRLSKYQQWLEEYIETHPDFIVPEGKKKEMMN 193
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGK- 229
+ K G + + + W + S +
Sbjct: 194 NFIKPGLQDLCVSRTTFQWGIPVTFDPKHVIYVWVDALSNYITAMGYDPDGSSDQFKKYW 253
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D H G D++ H + ++ KMSKS GN I +
Sbjct: 254 PCDCHVIGKDIMRFHSIYWPVMLHALGLELP--RQLFGHNWILFGEDKMSKSRGNVIYAS 311
Query: 290 ELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ- 339
++++ + I L+ + + T+ L I +++
Sbjct: 312 DVVDAFGVDAARYYLLSEMPYGSDGSITYESLIERFNTDLANTLGNLVNRTIAMAQKYFG 371
Query: 340 -TSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAH 390
+P L TV + L R + ++ + S
Sbjct: 372 GVIQPADAAEPVDADLRATALKTVEEVDRLMNQYRMADTLDAVISLARRSNK 423
>gi|225677273|ref|ZP_03788256.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
gi|225590693|gb|EEH11937.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Muscidifurax
uniraptor]
Length = 838
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 82/317 (25%), Gaps = 32/317 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R + DV+ R R E V + I A E+ + N +
Sbjct: 42 IHMGHLRNYAIGDVIARYKRANGFE--VLH---------PIGWDAFGLPAENAARDNNIS 90
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI 152
T +N + + +T + + + HG AY + +
Sbjct: 91 PETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAYRKESWV 150
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRSTPMEPGWESP 207
+D + + G V ++ + L K ++ W
Sbjct: 151 NWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLK-NWPEK 209
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+ W + + + +V ++ H A C +
Sbjct: 210 VKTMQERWIGKSEGATIEF--EVVGLNKKLKVFTTYPHTLFGASFCAVAAEHPIVQDLKN 267
Query: 268 NGFLN-------LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
+ ++ K + N I + L K I +LM + I
Sbjct: 268 GSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLMEYGEGAI 327
Query: 321 DFTVQRLTEAEILLSKW 337
K+
Sbjct: 328 FGCPAHDQRDFEFAQKY 344
>gi|309813013|ref|ZP_07706741.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
gi|308433085|gb|EFP56989.1| arginine--tRNA ligase [Dermacoccus sp. Ellin185]
Length = 594
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
P V H+G+ R +V D L R+L
Sbjct: 130 PNVAKEMHVGHLRTTVVGDSLARVLERLGH 159
>gi|288561373|ref|YP_003424859.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
gi|288544083|gb|ADC47967.1| arginyl-tRNA synthetase ArgS [Methanobrevibacter ruminantium M1]
Length = 573
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R ++ D L RLL Y N
Sbjct: 129 HIGHIRNSVIGDSLRRLLTKAGYNVDTQYYVN 160
>gi|256426015|ref|YP_003126668.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
gi|256040923|gb|ACU64467.1| methionyl-tRNA synthetase [Chitinophaga pinensis DSM 2588]
Length = 693
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 23/158 (14%), Positives = 42/158 (26%), Gaps = 20/158 (12%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEHPSI 90
HIG+ I D+ R LR + V ++ TD I I+ ++
Sbjct: 18 GPVHIGHLAGCYIPADIYVRYLRAK--KADVKFIGG-TDEHGVPI---TIKAMKE----- 66
Query: 91 PINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
N I K + T + + H + + G E
Sbjct: 67 --NVTPQDIVDKYHKIIYDSFTDMGISFDIFSRTTKQVHHETAADFFKTMYDKGLFEEKE 124
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E FD ++ + ++
Sbjct: 125 SEQFFDETANVFLADRYIVGTCPKCGNPNAYGDQCERC 162
>gi|261338690|ref|ZP_05966574.1| valyl-tRNA synthetase [Bifidobacterium gallicum DSM 20093]
gi|270276239|gb|EFA22093.1| valyl-tRNA synthetase [Bifidobacterium gallicum DSM 20093]
Length = 966
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R + V Y DD
Sbjct: 58 PTVSGSLHVGHVFSYTHTDIIARFKRMNGFD--VFYPMG---WDD 97
>gi|220918010|ref|YP_002493314.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
gi|219955864|gb|ACL66248.1| leucyl-tRNA synthetase [Anaeromyxobacter dehalogenans 2CP-1]
Length = 832
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + D L R LR +
Sbjct: 48 GAMHMGHARVYTIGDALARHLRMRGFD 74
>gi|218777886|ref|YP_002429204.1| methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
gi|218759270|gb|ACL01736.1| Methionyl-tRNA synthetase [Desulfatibacillum alkenivorans AK-01]
Length = 643
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 50/335 (14%), Positives = 86/335 (25%), Gaps = 77/335 (22%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A IV D R + + +T D DK++E A +E
Sbjct: 14 VNARPHLGHAYTTIVADTAKRYHQLRGQDAYF-----LTGTDEHGDKVVEAAEKE----- 63
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--A 148
N + + F L +HI + ++Q I +G Y
Sbjct: 64 -NKEVRDYVDMISGLFRNLWPELLISNDQFIRTTDADHIKVVQEVLQKIYDNGDIYFSEY 122
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH------------------------ 184
F K + ++ + ++ +
Sbjct: 123 EGLYCFGCERFYLERELVDGKCPDHEVEPKKIKESNYFFRMSKYQDWLIDHIKKNPGFIR 182
Query: 185 KKNPADFILWKRSTPMEP-------------------------GWESPWGRGRPGWHIEC 219
+ A+ +L P+E W
Sbjct: 183 PQRYANEVLSFLKEPLEDLCISRPKTRLTWGIDLPFDENYVTYVWFDALLNYASALGYPE 242
Query: 220 SAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMS 279
Y H D++ PH A N +G+ N+ KMS
Sbjct: 243 GEKFQKYWPG--VQHVVAKDILKPHGIYWPTMMKAAG--IPVYNHLNVHGYWNVADSKMS 298
Query: 280 KSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
KS GN + EL + + R ++
Sbjct: 299 KSLGNVVEPLEL-------SKKYGIEQFRYFLMRE 326
>gi|71083692|ref|YP_266412.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
gi|71062805|gb|AAZ21808.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1062]
Length = 513
Score = 38.1 bits (87), Expect = 2.8, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 15/130 (11%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIND 94
H+G+A IV D R R V + +T D+ KI +RA +
Sbjct: 17 RPHMGHAYSSIVADFFARFKRIDGF--NVHF---LTGTDEHGLKI-QRAAERKK-----I 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ +Q F + L H + +L + + Y +
Sbjct: 66 DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125
Query: 154 FDTSSIPNYG 163
+ S Y
Sbjct: 126 YSVSDEAYYS 135
>gi|182437971|ref|YP_001825690.1| arginyl-tRNA synthetase [Streptomyces griseus subsp. griseus NBRC
13350]
gi|238688989|sp|B1VTB7|SYR_STRGG RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|178466487|dbj|BAG21007.1| putative arginyl-tRNA synthetase [Streptomyces griseus subsp.
griseus NBRC 13350]
Length = 594
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
Query: 32 GPTVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVT 67
G TV D+A H+G+ R ++ D + R+L + E V
Sbjct: 118 GTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTG-ENVVR 160
>gi|326778607|ref|ZP_08237872.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
gi|326658940|gb|EGE43786.1| arginyl-tRNA synthetase [Streptomyces cf. griseus XylebKG-1]
Length = 590
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
Query: 32 GPTVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVT 67
G TV D+A H+G+ R ++ D + R+L + E V
Sbjct: 118 GTTVIDYAQPNVAKEMHVGHLRSAVIGDAVVRILEFTG-ENVVR 160
>gi|284161225|ref|YP_003399848.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
gi|284011222|gb|ADB57175.1| arginyl-tRNA synthetase [Archaeoglobus profundus DSM 5631]
Length = 548
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 11/37 (29%), Positives = 15/37 (40%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+ R + Y N
Sbjct: 115 PDGPIHIGHMRNSIIGDSLARIFRKAGFDVTTHYYVN 151
>gi|229819128|ref|YP_002880654.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
gi|229565041|gb|ACQ78892.1| arginyl-tRNA synthetase [Beutenbergia cavernae DSM 12333]
Length = 593
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 10/30 (33%), Positives = 13/30 (43%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
P V H+G+ R +V D L R L
Sbjct: 138 PNVAKEMHVGHLRTTVVGDALARTLEALGH 167
>gi|88607102|ref|YP_505755.1| valyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
gi|88598165|gb|ABD43635.1| valyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
Length = 806
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 8/31 (25%), Positives = 12/31 (38%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PTV H+G+ D + R R +
Sbjct: 48 PTVSGSLHMGHVFSYCHADFIARYKRLAGFD 78
>gi|70933656|ref|XP_738171.1| hypothetical protein [Plasmodium chabaudi chabaudi]
gi|56514164|emb|CAH82575.1| hypothetical protein PC300080.00.0 [Plasmodium chabaudi chabaudi]
Length = 316
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 18/96 (18%), Positives = 32/96 (33%), Gaps = 14/96 (14%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A +++ D + R R + T T D+ KI +A +
Sbjct: 219 VNGDPHIGHAYEIVLADTIARYHRNLGRDLFFT-----TGADEHGLKIANQAARN----- 268
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN 127
N + +N +F L + +
Sbjct: 269 -NMTPQELCDQNVIKFKNLNKNLHTTEDYYVRTTSE 303
>gi|304389712|ref|ZP_07371671.1| valine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
gi|304326888|gb|EFL94127.1| valine--tRNA ligase [Mobiluncus curtisii subsp. curtisii ATCC
35241]
Length = 896
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 63 PTVSGSLHVGHVFSYTHTDVVARYQRMCG--KNVFYPMG---WDD 102
>gi|217970006|ref|YP_002355240.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
gi|217507333|gb|ACK54344.1| methionyl-tRNA synthetase [Thauera sp. MZ1T]
Length = 733
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 41/156 (26%), Gaps = 17/156 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V YV DD ++ RA +E +
Sbjct: 16 GDIHLGHLVGYIQADIWVRYQRMRG--HSVHYVC----ADDTHGTPVMLRAEKEGLT--- 66
Query: 93 NDAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + ++D T H + + + + G + E
Sbjct: 67 ---PEQLIERVHGEHLRDFTAFGVAFDNYHSTHSAENRFYAEDIYARLKAGGLIDTRSIE 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+D + + +
Sbjct: 124 QYYDPVKEMFLPDRFIKGECPKCGAPDQYGDNCEAC 159
>gi|197123221|ref|YP_002135172.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
gi|196173070|gb|ACG74043.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. K]
Length = 832
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + D L R LR +
Sbjct: 48 GAMHMGHARVYTIGDALARHLRMRGFD 74
>gi|116753536|ref|YP_842654.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
gi|121694355|sp|A0B5P0|SYR_METTP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|116664987|gb|ABK14014.1| arginyl-tRNA synthetase [Methanosaeta thermophila PT]
Length = 558
Score = 38.1 bits (87), Expect = 2.9, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 15/32 (46%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R ++ D + R+LR Y N
Sbjct: 126 HVGHIRNSVIGDTIVRILRRAGYNVEAQYYVN 157
>gi|237743871|ref|ZP_04574352.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
gi|229432902|gb|EEO43114.1| leucyl-tRNA synthetase [Fusobacterium sp. 7_1]
Length = 859
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|42519974|ref|NP_965889.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
gi|60390721|sp|Q73IT7|SYL_WOLPM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|42409711|gb|AAS13823.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
melanogaster]
Length = 838
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 41/317 (12%), Positives = 82/317 (25%), Gaps = 32/317 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R + DV+ R R E V + I A E+ + N +
Sbjct: 42 IHMGHLRNYAIGDVIARYKRANGFE--VLH---------PIGWDAFGLPAENAARDNNIS 90
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI 152
T +N + + +T + + + HG AY + +
Sbjct: 91 PETWTKENIDNMRTQLKSIGLSYNWERELSTCEPDYYKHEQKFFLDFLKHGLAYRKESWV 150
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI-----LWKRSTPMEPGWESP 207
+D + + G V ++ + L K ++ W
Sbjct: 151 NWDPVDQTVLANEQVVDGKGWRSGAVVEKRKLSQWFLKITDFAEDLLKCLQSLK-NWPEK 209
Query: 208 WGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIH 267
+ W + + + +V ++ H A C +
Sbjct: 210 VKTMQERWIGKSEGATIEF--EVVGLNKKLKVFTTYPHTLFGASFCAVAAEHPIVQDLKN 267
Query: 268 NGFLN-------LEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPI 320
+ ++ K + N I + L K I +LM + I
Sbjct: 268 GSSVVIPVLDTGIQEIKSKRENDEKIGVYTGLNVKHPFLDKELPLYIANFVLMEYGEGAI 327
Query: 321 DFTVQRLTEAEILLSKW 337
K+
Sbjct: 328 FGCPAHDQRDFEFAQKY 344
>gi|322517283|ref|ZP_08070160.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322124113|gb|EFX95652.1| valine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 901
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 21/212 (9%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S G D+IF I QS
Sbjct: 455 WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 514
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N+ IH + +GRKMSKS GN I +++E + A +R +
Sbjct: 515 EFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSN 567
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTS------------KGIIDPAVLSALYNDLN 360
+ + F+ +++ + ++K S V++ ++
Sbjct: 568 GSAPGQDMRFSYEKMDASWNFINKIWNISRYILMNNKGLTLDVARENVAKVVAGQAGNVT 627
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
+ L++ + T+N D F + HIL
Sbjct: 628 DHWILHNLNETIGKVTENFDKFE-FGVAGHIL 658
>gi|320547575|ref|ZP_08041860.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
gi|320447650|gb|EFW88408.1| glutamate--tRNA ligase [Streptococcus equinus ATCC 9812]
Length = 485
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 53/389 (13%), Positives = 111/389 (28%), Gaps = 49/389 (12%)
Query: 23 PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD--- 74
P IR+ Y PT HIGNAR L+ L R+Y G+ +V I TD
Sbjct: 2 PKKIRVRYAPSPT--GLLHIGNARTA-----LFNYLYARHYGGD----FVIRIEDTDRKR 50
Query: 75 -IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
++D ER++ E+ + + + + + +
Sbjct: 51 HVED--GERSQLENL-KWLGMDWDESPQTHEKYRQSERLDIYQKYIDQLLAEGKAYKSYV 107
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
+ A + + I E++ +P N +
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAYIAERQAKGIIPTVRLAVNESGIYK 167
Query: 194 WKRSTPMEPG---------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
W + W G P ++ + + +L ++ + G +
Sbjct: 168 WHDIVKGDIEFEGGNVGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTP 225
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
+ A E + L + K + + +E + + +
Sbjct: 226 KQL---MVYEALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMP 277
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDL 359
+ + + + + + E L K P K + + D
Sbjct: 278 EAVFNFIALLGWNPGGEDEIFSREELIKLFDEHRLSKSPAAFDQKKMDWMSNEYIKNADF 337
Query: 360 NTVSAIQA--LHKLARESTKNHDLLPIFN 386
+T+ A+ L + R + K L+ ++
Sbjct: 338 DTIFAMAKPFLEEAGRLTDKAEKLVELYK 366
>gi|260495228|ref|ZP_05815356.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
gi|260197285|gb|EEW94804.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_33]
Length = 859
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 55/219 (25%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|257454862|ref|ZP_05620113.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257447795|gb|EEV22787.1| methionyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 703
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 20/156 (12%), Positives = 40/156 (25%), Gaps = 17/156 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ + VTYV DD I+ +A +
Sbjct: 15 GPIHLGHLVEYIQTDIWVRAMKSLGHQ--VTYVC----ADDAHGTAIMLKAEANGVT--- 65
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNE 151
I KD + + + + + +GH E
Sbjct: 66 --PEQQIAD-VKASHEKDFAGFLVDFDNYYSTHSPENEHYSQLIYNRLYENGHISHKAVE 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
++D + + +
Sbjct: 123 QLYDPEKGLFLADRFVKGECPKCGAKDQYGDNCEVC 158
>gi|224025452|ref|ZP_03643818.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
18228]
gi|224018688|gb|EEF76686.1| hypothetical protein BACCOPRO_02192 [Bacteroides coprophilus DSM
18228]
Length = 680
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 41/160 (25%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYE 147
+ + + + ++ H + + G E
Sbjct: 70 T------PQDVVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D + + +K
Sbjct: 124 KTSEQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKC 163
>gi|153811133|ref|ZP_01963801.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
gi|149832631|gb|EDM87715.1| hypothetical protein RUMOBE_01524 [Ruminococcus obeum ATCC 29174]
Length = 652
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 19 PHIGNTYEIVLADAIARYKRQEGYD--VFFQ---TGTDEHGQKIELKAEEAGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + + + +H Q+ + + + G Y+ + E ++
Sbjct: 68 PKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDADHEKQVQKIFKKMYAKGDIYKGHYEGMY 127
Query: 155 DTSSIPNYGS 164
T +
Sbjct: 128 CTPCESFFTE 137
>gi|322372362|ref|ZP_08046898.1| methionine--tRNA ligase [Streptococcus sp. C150]
gi|321277404|gb|EFX54473.1| methionine--tRNA ligase [Streptococcus sp. C150]
Length = 667
Score = 38.1 bits (87), Expect = 3.0, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 43/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K+ Q + + ++ +
Sbjct: 74 MAVGVKDLWQLLNISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVSDEEF 133
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D G E K +K
Sbjct: 134 FTESQLAEVYRDEQGKVIGGVAPSGHEVELVSEESYFFKLSNYADRLAAFFKEHPEF 190
>gi|307946518|ref|ZP_07661853.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
gi|307770182|gb|EFO29408.1| methionyl-tRNA synthetase [Roseibium sp. TrichSKD4]
Length = 510
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 10/29 (34%), Positives = 13/29 (44%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V HIG+A IV D++ R E
Sbjct: 12 VNGSPHIGHAYTSIVADIMKRNRTALGYE 40
>gi|269965164|ref|ZP_06179298.1| chaperone protein HscA [Vibrio alginolyticus 40B]
gi|269830150|gb|EEZ84377.1| chaperone protein HscA [Vibrio alginolyticus 40B]
Length = 617
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 431 TAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQSEIQVKPSYGLSDNEVADMLRDSMTH---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G ++ E +N+ AIE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDDLLSEQEKQNLIKAIEALIELR-----NGD--DADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|76257402|gb|ABA41005.1| DNase 1 [Eucommia ulmoides]
gi|187942423|gb|ACD40020.1| DNase 1 [Eucommia ulmoides]
Length = 328
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 20/49 (40%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ + +I ++ +R K + AD ++K++ G+ +
Sbjct: 154 VNTIDPRESSSIPREVQMAAVQRSKARSKKNYPKADELQKKIVDAGYRV 202
>gi|91225146|ref|ZP_01260368.1| chaperone protein HscA [Vibrio alginolyticus 12G01]
gi|91190089|gb|EAS76360.1| chaperone protein HscA [Vibrio alginolyticus 12G01]
Length = 617
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 431 TAMSVHVVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQSEIQVKPSYGLSDNEVADMLRDSMTH---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G ++ E +N+ AIE L++ R AD I +G +
Sbjct: 542 GLIAAMQADGDDLLSEQEKQNLIKAIEALIELR-----NGD--DADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|58584465|ref|YP_198038.1| arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
gi|75498018|sp|Q5GT78|SYR_WOLTR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|58418781|gb|AAW70796.1| Arginyl-tRNA synthetase [Wolbachia endosymbiont strain TRS of
Brugia malayi]
Length = 565
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 12/30 (40%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL LL+
Sbjct: 128 PT--GPLHIGHARGAVFGDVLTNLLKKVGY 155
>gi|320106556|ref|YP_004182146.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
gi|319925077|gb|ADV82152.1| methionyl-tRNA synthetase [Terriglobus saanensis SP1PR4]
Length = 709
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 18/100 (18%), Positives = 33/100 (33%), Gaps = 15/100 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V HIG+A + D + R R + +T D+ KI +R+ +
Sbjct: 17 VNARPHIGHAYTTLTADTIARRKRLQGFDTYF-----LTGTDEHGQKI-QRSAE-----A 65
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+ ++QF R+ R T+ +
Sbjct: 66 AGIPPQQFADQVSEQFRALWDRMGV-TYDQYIRTTDEAHK 104
>gi|305664281|ref|YP_003860569.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
gi|304378850|gb|ADM28689.1| Isoleucyl-tRNA synthetase [Ignisphaera aggregans DSM 17230]
Length = 997
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 24/145 (16%), Positives = 48/145 (33%), Gaps = 26/145 (17%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG---------------EKCVTYVRNITDIDD 77
PT F H+G+AR DV+ R +R E V RN+
Sbjct: 55 PTANGFMHVGHARGRTFKDVMLRYMRMKGYCVWDQAGWDTQGLPVELEVE--RNL----- 107
Query: 78 KI-IERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACL---APTHQPRATNHIPQMI 133
+I ++ + + + + K + RL ++ R +I +
Sbjct: 108 RIKTKKDIETYGVENFVRECQKLVDYYIDSWRKASIRLGLWLDYDNAYETRNPRYIEAVW 167
Query: 134 YLIQNIILHGHAYEANNEIIFDTSS 158
+ ++++ G+ YE +
Sbjct: 168 HFLKSMWDRGYLYEDLRVVPVCPRC 192
>gi|256845534|ref|ZP_05550992.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
gi|256719093|gb|EEU32648.1| methionyl-tRNA synthetase [Fusobacterium sp. 3_1_36A2]
Length = 636
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 37/261 (14%), Positives = 76/261 (29%), Gaps = 28/261 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V H+G+A I DV+ R + + T+ T +D+ K+ + A Q +
Sbjct: 14 VNGDPHVGSAYTTIAADVINRYNKAMGMD---THFM--TGLDEHGQKVEQAAEQNGYT-- 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANN 150
T K T F L H + ++ + G Y+
Sbjct: 67 ----PQAWTDKMTPNFKNMWAALDIKYDDFIRTTEDRHKKAVKRILDTVNAKGDIYKGEY 122
Query: 151 EIIFDTSSIPNYGSFS-----RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + S + + +++ E Y K + P +
Sbjct: 123 EGKYCISCETFFPENQLNGSNKCPDCGKELRVLKEESYFFKMSKYADALLKHIEEHPDFI 182
Query: 206 SPWGR-----GRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA---DR 257
P R ++ ++S + I + + + A +
Sbjct: 183 LPHSRRNEVISFIKQGLQDLSISRNTFTWGIPIDFAPGHITYVWFDALTNYLTSAGFEND 242
Query: 258 IEKTANIWIHNGFLNLEGRKM 278
+K W + ++L G+ +
Sbjct: 243 DKKFDKFWNNARVVHLIGKDI 263
>gi|225026669|ref|ZP_03715861.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
gi|224956039|gb|EEG37248.1| hypothetical protein EUBHAL_00921 [Eubacterium hallii DSM 3353]
Length = 654
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 42/130 (32%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + S
Sbjct: 19 PHIGNTYEIVLADAIARFKRKEGYD--VRFQ---TGTDEHGQKIELKAAEAGIS------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + + +H Q+ + + + G Y+ + E ++
Sbjct: 68 PKEFVDNTAGEIKRIWDLMNTSYDKFIRTTDEDHEKQVQKIFKKLYDKGDIYKGHYEGMY 127
Query: 155 DTSSIPNYGS 164
T +
Sbjct: 128 CTPCESFFTE 137
>gi|116670794|ref|YP_831727.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
gi|189082980|sp|A0JX57|SYL_ARTS2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|116610903|gb|ABK03627.1| leucyl-tRNA synthetase [Arthrobacter sp. FB24]
Length = 843
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 18 FQAIDPS-NIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F +D R YV Y H+G+A + DV+ R LR +
Sbjct: 43 FTPVDDGSRERRYVLDMFPYPSGDLHMGHAEAFAMGDVVARYLRQKGYD 91
>gi|116513002|ref|YP_811909.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris SK11]
gi|122939932|sp|Q02W76|SYE_LACLS RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|116108656|gb|ABJ73796.1| glutamate--tRNA(Gln) ligase / glutamyl-tRNA synthetase [Lactococcus
lactis subsp. cremoris SK11]
Length = 483
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 43/378 (11%), Positives = 95/378 (25%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G+ + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLFARHHGGDFIIR----IEDTDRERHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--QPRATNHIPQMIYLIQNIILH 142
E+ + + + L + + ++
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTPEELEADHAK 118
Query: 143 GHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
A S + RK + R+ + I+ K
Sbjct: 119 QEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIV-KGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + H +
Sbjct: 178 FEGGNIGGDWVIQKRDGYPTYNFAVVVDDHD--------MQISHVIRGDDHIANTPKQLV 229
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
+ L + K + + +E + + + + I + +
Sbjct: 230 VYDALGWEAPQFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMSDAIFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR- 373
+ + + E L + + + D L + N+ + + +L +
Sbjct: 288 GWNPGGEKEIFSREELIELFDENRLSKSPAA-FDQKKLDWMDNEYIKNADFAKVFELTKP 346
Query: 374 ---ESTKNHDLLPIFNAS 388
+ + +
Sbjct: 347 FLLAANRFDERAQELVKL 364
>gi|332321728|sp|P0CW66|SYK_METMI RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|2645489|gb|AAB87410.1| lysyl-tRNA synthetase [Methanococcus maripaludis]
Length = 533
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 46/359 (12%), Positives = 88/359 (24%), Gaps = 46/359 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
G T HIGNAR + D +Y+ + E + ++ DD P
Sbjct: 25 GITPSGHIHIGNARETLTADAVYKGMLKKGAEAKLIFI-----ADD-----------YDP 68
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ + + + + + +H + NE
Sbjct: 69 LRKLYPFLPKEFEKYIGMPLSEI-PCPQGCCKSYADHFLMPFLNSLEDLGVEITTHRANE 127
Query: 152 IIFDTSSIP--NYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+R KI E R P + + K E S
Sbjct: 128 CYKAGMYNEAIITALENRLKIKELLDSYRKEPLADNWYPLNVVCEKCGKMHETKVTSYNS 187
Query: 210 RGRPGWHIECSAMSSHY--------------LGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ ++ + ++I G + + H
Sbjct: 188 EDKTITYVCKCGFENTVQPFNGIGKLPWRVDWPARWNIFGVTAEPMGKDHAASGGSYD-- 245
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSW----PAPVIRLAM 311
I+ I+ + + + G+ F + W V+R +
Sbjct: 246 TGIKIARQIFNYQAPEKMVYEWIQLKIGDKAMPMSSSSGVVFAVKDWTEICHPEVLRFLI 305
Query: 312 LMTHYREPIDFT-------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
L + IDF V E E + + ++ + D +L T
Sbjct: 306 LKGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNENEKISLYELVTPK 364
>gi|67921649|ref|ZP_00515167.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
gi|67856761|gb|EAM52002.1| Arginyl-tRNA synthetase, class Ic [Crocosphaera watsonii WH 8501]
Length = 585
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R L + + + +V
Sbjct: 132 MHVGHLRSTIIGDCIARTLEFLGYDVLRLNHV 163
>gi|260459783|ref|ZP_05808037.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
gi|259034585|gb|EEW35842.1| arginyl-tRNA synthetase [Mesorhizobium opportunistum WSM2075]
Length = 585
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 18/71 (25%), Positives = 30/71 (42%), Gaps = 10/71 (14%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD----IDDKIIERARQEHP 88
PT H+G+ R +V D L ++ + + YV N D ID ++ R+
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANIMAFAGYDVTKEYVIN--DAGSQID--VLGRSAFLRY 186
Query: 89 SIPINDAISII 99
S + + I I
Sbjct: 187 SEALGEDIGEI 197
>gi|242309623|ref|ZP_04808778.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
gi|239523624|gb|EEQ63490.1| arginyl-tRNA synthetase [Helicobacter pullorum MIT 98-5489]
Length = 521
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 17/67 (25%), Positives = 22/67 (32%), Gaps = 12/67 (17%)
Query: 12 ERKITEFQAIDPSNIRM---YV----CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEK 64
+ P + YV GP HIG+AR I D L R+ +Y
Sbjct: 83 TCTKDFLKPYAPKKETILLEYVSANPTGP-----LHIGHARGAIFGDSLSRIGKYLGYSI 137
Query: 65 CVTYVRN 71
Y N
Sbjct: 138 ATEYYIN 144
>gi|139436956|ref|ZP_01771116.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
25986]
gi|133776603|gb|EBA40423.1| Hypothetical protein COLAER_00089 [Collinsella aerofaciens ATCC
25986]
Length = 925
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 30/179 (16%), Positives = 48/179 (26%), Gaps = 18/179 (10%)
Query: 32 GPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERAR 84
GP Y HIG+A I D++ R E V YV D I+ K+ E+
Sbjct: 49 GP-PYANGPIHIGHAMNKISKDMINRYWMMQGYE--VPYVPGW-DCHGQPIEHKVEEKLG 104
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E + I + +K + ++ R + H
Sbjct: 105 TEKFNQTSTAKIRELCNKFAVENIELQK-------AGFRRLGVLGDWDNPYLTLYHQHDA 157
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG 203
A + +FD I +Y + + T G
Sbjct: 158 ADIEVFKAMFDKGMIYRGHKPVHWCKHCHTALAEAEIEYSDETSPSIFVRFEMTSKPVG 216
>gi|124024975|ref|YP_001014091.1| arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
gi|166232821|sp|A2C016|SYR_PROM1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|123960043|gb|ABM74826.1| Arginyl-tRNA synthetase [Prochlorococcus marinus str. NATL1A]
Length = 607
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D L R+L + E + +V
Sbjct: 153 MHVGHLRSTIIGDSLARVLEFCGYEVLRLNHV 184
>gi|167835830|ref|ZP_02462713.1| methionyl-tRNA synthetase [Burkholderia thailandensis MSMB43]
Length = 718
Score = 38.1 bits (87), Expect = 3.1, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 43/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLIHPY 187
>gi|150396508|ref|YP_001326975.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
gi|150028023|gb|ABR60140.1| methionyl-tRNA synthetase [Sinorhizobium medicae WSM419]
Length = 516
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 23/132 (17%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R E V + +T D+ K+ + A++E S
Sbjct: 20 PHIGHAYELIATDAMARFQRLDGRE--VFF---LTGTDEHGQKMQQTAKKEGIS------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++N+ +F L H + + G Y+ + +
Sbjct: 69 PQELAARNSAEFQNMARLLNASNDDFIRTTEKRHHEASQAIWTRMGEAGDLYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|111221510|ref|YP_712304.1| valyl-tRNA synthetase [Frankia alni ACN14a]
gi|111149042|emb|CAJ60724.1| Valyl-tRNA synthetase [Frankia alni ACN14a]
Length = 906
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R R E V Y
Sbjct: 64 PTVSGSLHVGHVFSYTHTDLIARYQRMRGRE--VFY 97
>gi|126656792|ref|ZP_01728006.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
gi|126622012|gb|EAZ92720.1| arginyl-tRNA synthetase [Cyanothece sp. CCY0110]
Length = 585
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 8/32 (25%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R L + + + +V
Sbjct: 132 MHVGHLRSTIIGDCIARTLEFLGYDVLRLNHV 163
>gi|307069628|ref|YP_003878105.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
CARI]
gi|306482888|gb|ADM89759.1| putative leucyl-tRNA synthetase [Candidatus Zinderia insecticola
CARI]
Length = 807
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 29 YVCGPTVY--DFAHIGNARPMIVFDVLYRL 56
Y C Y HIG+ R I+ D+L+R
Sbjct: 33 YTCSMIPYPSGKLHIGHLRNYIINDILFRY 62
>gi|255764461|ref|YP_003064629.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
gi|254547812|gb|ACT56689.2| methionyl-tRNA synthetase [Candidatus Liberibacter asiaticus str.
psy62]
Length = 511
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 26/147 (17%), Positives = 43/147 (29%), Gaps = 15/147 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A MI+ DVL R + V + T D+ KI + A+ +
Sbjct: 20 PHIGHAYEMIIADVLARF--HRLDGLDVLFT---TGTDEHGQKIAKAAQNAGVTT----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N++ F L H L + I G Y+ +
Sbjct: 70 -KVFVDQNSRNFRDMADVLDISYDDFIRTTEKRHHDTCRILWKKISDKGDIYKGCYSGWY 128
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPE 181
Y K + +
Sbjct: 129 SLRDEAYYNDDEVYKGADGQYYNAQHN 155
>gi|294791206|ref|ZP_06756363.1| valine--tRNA ligase [Scardovia inopinata F0304]
gi|294457677|gb|EFG26031.1| valine--tRNA ligase [Scardovia inopinata F0304]
Length = 991
Score = 38.1 bits (87), Expect = 3.2, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D++ R R + V Y DD
Sbjct: 74 PTVSGSLHVGHVFSYTHTDIIARFKRMQGFD--VFYPMG---WDD 113
>gi|227833193|ref|YP_002834900.1| excinuclease ABC, subunit B [Corynebacterium aurimucosum ATCC
700975]
gi|262184179|ref|ZP_06043600.1| excinuclease ABC subunit B [Corynebacterium aurimucosum ATCC
700975]
gi|227454209|gb|ACP32962.1| excinuclease ABC, subunit B [Corynebacterium aurimucosum ATCC
700975]
Length = 697
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 27/153 (17%), Positives = 53/153 (34%), Gaps = 29/153 (18%)
Query: 291 LLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPA 350
L++T R+ VI A + D + + E E K + IDP
Sbjct: 557 LIQTIGRAARNVSGEVIMYA------DKITDSMQEAIEETERRREK-QIAYNKEHGIDPQ 609
Query: 351 VLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIE 410
L D+ + +++ A E ++ D I + K ++ + ++
Sbjct: 610 PLRKKIADI-----LDQVYENADEQGQDADPTAIVD-----------KPDVSSMAADEVQ 653
Query: 411 KLV-----QERLILLKMKKFSSADYIRKQLESK 438
L+ Q R ++K F A +R ++
Sbjct: 654 ALIDDLTTQMREAARELK-FELAGRLRDEIADL 685
>gi|224537450|ref|ZP_03677989.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
DSM 14838]
gi|224520976|gb|EEF90081.1| hypothetical protein BACCELL_02329 [Bacteroides cellulosilyticus
DSM 14838]
Length = 679
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 20/161 (12%), Positives = 39/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ I + + R + H + + G
Sbjct: 70 T------PQDIVDRYHTLIKESFKEFGIS-FDVYSRTSSKTHHDTASEFFRKLYDKGDFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E + +D + +K
Sbjct: 123 EKTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|239942144|ref|ZP_04694081.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|239988607|ref|ZP_04709271.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 11379]
gi|291445591|ref|ZP_06584981.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
gi|291348538|gb|EFE75442.1| arginyl-tRNA synthetase [Streptomyces roseosporus NRRL 15998]
Length = 590
Score = 38.1 bits (87), Expect = 3.3, Method: Composition-based stats.
Identities = 13/44 (29%), Positives = 21/44 (47%), Gaps = 9/44 (20%)
Query: 32 GPTVYDFA--------HIGNARPMIVFDVLYRLLRYYYGEKCVT 67
G TV D+A H+G+ R ++ D + R+L + E V
Sbjct: 118 GKTVIDYAQPNVAKEMHVGHLRSAVIGDAMVRILEFTG-EDVVR 160
>gi|238490458|ref|XP_002376466.1| hypothetical protein AFLA_105950 [Aspergillus flavus NRRL3357]
gi|220696879|gb|EED53220.1| hypothetical protein AFLA_105950 [Aspergillus flavus NRRL3357]
Length = 238
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 12/19 (63%), Positives = 14/19 (73%)
Query: 70 RNITDIDDKIIERARQEHP 88
NITD+DDKII R Q+H
Sbjct: 1 MNITDVDDKIIVRGWQQHL 19
>gi|187942421|gb|ACD40019.1| DNase 2 [Eucommia ulmoides]
gi|187942425|gb|ACD40021.1| DNase 2 [Eucommia ulmoides]
Length = 328
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 7/49 (14%), Positives = 20/49 (40%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ + +I ++ +R K + AD ++K++ G+ +
Sbjct: 154 VNTIDPRESSSIPREVQMAAVQRSKARSKKNYPKADELQKKIVDAGYRV 202
>gi|297619524|ref|YP_003707629.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
gi|297378501|gb|ADI36656.1| arginyl-tRNA synthetase [Methanococcus voltae A3]
Length = 590
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L + Y N
Sbjct: 136 HIGHGRNMVIGDSLKRILINAGYDVETQYYVN 167
>gi|298487010|ref|ZP_07005062.1| Methionyl-tRNA synthetase-related protein [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
gi|298158452|gb|EFH99520.1| Methionyl-tRNA synthetase-related protein [Pseudomonas savastanoi
pv. savastanoi NCPPB 3335]
Length = 499
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAQAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|302422642|ref|XP_003009151.1| rho-type GTPase-activating protein [Verticillium albo-atrum
VaMs.102]
gi|261352297|gb|EEY14725.1| rho-type GTPase-activating protein [Verticillium albo-atrum
VaMs.102]
Length = 1215
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 30/187 (16%), Positives = 57/187 (30%), Gaps = 8/187 (4%)
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ E + + S T +LE G + +
Sbjct: 643 TEASHPPQRASGHTRSVSETTRGTASPRWPKTPM-VLEDPSPGHEISSPISLHSSDDPAF 701
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARES 375
+ + + QR+ E E + + + D T I+ L LA
Sbjct: 702 LKRQLRNSEQRVAELERQFNTEKDLKHLNKKLVEKRKTVSTLDTQTEIMIRQLEVLAGYV 761
Query: 376 TKNHDLLPIFN----ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYI 431
+ + + + I + + + +S AIE L +ER L++ K + AD
Sbjct: 762 ERAKETKTPVDPRDLEDSAIKDFVQKLDKVKETMSEAIEALHEERDELVEEKNKAIAD-- 819
Query: 432 RKQ-LES 437
R + L
Sbjct: 820 RDRALLE 826
>gi|242062646|ref|XP_002452612.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
gi|241932443|gb|EES05588.1| hypothetical protein SORBIDRAFT_04g029070 [Sorghum bicolor]
Length = 802
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 35/345 (10%), Positives = 77/345 (22%), Gaps = 46/345 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ DV R R Y+ TD +A +E
Sbjct: 27 PYVNNVPHLGNIIGCVLSADVFARYCRLRGYNAL--YICG-TDEYGTA----TETKAMEE 79
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
S I K + ++ ++ I ++ +
Sbjct: 80 KCS------PKEICDKYHAIHNEVYKWFDIKFDKFGRTSSPQQTEICQAIFHKLMENNWL 133
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + ++ + + T + + + +L P E
Sbjct: 134 TENTMQQLYCDTCRRFLADRLVEGTCPIEGCTNKAARGDQCDNCSHML----NPTE---- 185
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
+ H D +F + A +W
Sbjct: 186 ---------------LIDPKCKVCKNTPHIRETDHLFLDLPLLEGKLVNYINDTSVAGMW 230
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDFT 323
N + + + +L + V + + +T
Sbjct: 231 SQNAIQATNAW-LKEGLKSRCITRDLKWGVPVPIEKYKDKVFYVWFDAPIGYVSITASYT 289
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL 368
+ + + K + + L T +
Sbjct: 290 PEWEQWWKNPDNVELFQFMGKDNVPFHTIMFPSTLLGTGENWTMM 334
>gi|171463853|ref|YP_001797966.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
gi|171193391|gb|ACB44352.1| methionyl-tRNA synthetase [Polynucleobacter necessarius subsp.
necessarius STIR1]
Length = 556
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 18/89 (20%), Positives = 29/89 (32%), Gaps = 16/89 (17%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ + D+ R R E V YV DD I+ RA +E N
Sbjct: 21 IHIGHLVEYVQTDIWVRFQRMCGHE--VHYV----GADDTHGTPIMLRAEKE------NL 68
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQP 123
+ + ++ +D +
Sbjct: 69 TPKELIANVWKEHKRDFDNFLISFDNYYT 97
>gi|159041586|ref|YP_001540838.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
gi|157920421|gb|ABW01848.1| arginyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
Length = 630
Score = 38.1 bits (87), Expect = 3.4, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 16/29 (55%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
HIG+ R M++ D L RLLR+ +
Sbjct: 127 HIGHCRNMVLGDSLVRLLRFMGHNVSARF 155
>gi|304438288|ref|ZP_07398229.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
67H29BP]
gi|304368654|gb|EFM22338.1| methionine--tRNA ligase [Selenomonas sp. oral taxon 149 str.
67H29BP]
Length = 516
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 22/147 (14%), Positives = 41/147 (27%), Gaps = 10/147 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A V D + R R + V + +T D+ KI + A +E + +
Sbjct: 21 HIGHAYCTTVADTIARYKRLAGFD--VFF---LTGSDEHGQKIQQAAEKEGITPI--RYV 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
I + + + T QPR + + I +
Sbjct: 74 DRIVASFQELWRLLGISYDDFIRTTQPRHYELVQDIFQRIYDQGDIYKGEYKGLYCTPCE 133
Query: 157 SSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + + +
Sbjct: 134 SYWTRLQLDENGCCPDCHRPVQEVSEE 160
>gi|290968885|ref|ZP_06560422.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
gi|290781181|gb|EFD93772.1| leucine--tRNA ligase [Megasphaera genomosp. type_1 str. 28L]
Length = 826
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 44/150 (29%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+ R R V + A E+ +I N
Sbjct: 48 HMGHVRNYTIGDVMARYRRMKGF--NVLHPMGY---------DAFGMPAENAAIKHNIPP 96
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHI---PQMIYLIQNIILHGHAYEANNEII 153
+ T KN + + L + AT H ++ + G AY ++
Sbjct: 97 AEWTYKNIENMTRQQRELGLSYDWDREVATCHEEYYKWTQWIFELFYKRGLAYRKEAKVN 156
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
+ + + V +K
Sbjct: 157 WCEHCNTVLANEQVIDGTCWRCDQPVVKKD 186
>gi|196234225|ref|ZP_03133056.1| lysyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
gi|196221684|gb|EDY16223.1| lysyl-tRNA synthetase [Chthoniobacter flavus Ellin428]
Length = 607
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 55/315 (17%), Positives = 96/315 (30%), Gaps = 41/315 (13%)
Query: 34 TVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID--DKIIERARQE----- 86
T H+G R +++ D ++R LR E V Y+ + D D D+I +
Sbjct: 22 TPSGRVHVGALRGVLIHDAIFRTLREKGIE--VKYLFGVDDYDPLDEIPAGKGEHFEKYL 79
Query: 87 -----HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL 141
+ P N + + Q+F + L + + IL
Sbjct: 80 GQPLCNVPPPDNSPATDMAEHYIQEFFEIFEELGVK-VEKYRMRDVYQSGHFNQAIDTIL 138
Query: 142 HGHAYEANNEIIFDTSSIPNYG--------SFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
A + + S+ + +I ++ + + D +
Sbjct: 139 QNAATVRR--VYKEVSNSDRPETWYPFQAVCENCGRIGTTEVFAYDGREVSYRCRPDMVK 196
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP--HHENEIAQ 251
W R E G+G+ W +E + +L I G G D + A
Sbjct: 197 WARGCGHEGRVSPFDGKGKLPWKLE---WVAKWLTFPVTIEGAGKDHSTKGGSRDVSAAC 253
Query: 252 SCCADRIEKTANIWIHNGFLNLEGRKMSKSNG-NFITINELLETKKFGGRSWPAPVIRLA 310
E N+ + SK G I +LL P V+R
Sbjct: 254 LKAIFGKEPPLNVPYEFFLVGGAKMSSSKGIGAAARNIADLL----------PPEVLRFL 303
Query: 311 MLMTHYREPIDFTVQ 325
M+ T P++F V+
Sbjct: 304 MIRTKPLSPVNFDVK 318
>gi|94989852|ref|YP_597952.1| methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
gi|94543360|gb|ABF33408.1| Methionyl-tRNA synthetase [Streptococcus pyogenes MGAS10270]
Length = 666
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 18/52 (34%), Positives = 25/52 (48%), Gaps = 8/52 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHP 88
HIG+A I DVL R R E V Y +T +D+ KI +A++
Sbjct: 20 HIGSAYTTIACDVLARYKRLMGHE--VFY---LTGLDEHGQKIQTKAKEAGI 66
>gi|91763268|ref|ZP_01265232.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
gi|91717681|gb|EAS84332.1| methionyl-tRNA synthetase [Candidatus Pelagibacter ubique HTCC1002]
Length = 513
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 23/130 (17%), Positives = 39/130 (30%), Gaps = 15/130 (11%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIND 94
H+G+A IV D R R V + +T D+ KI +RA +
Sbjct: 17 RPHMGHAYSSIVADFFARFKRIDGF--NVHF---LTGTDEHGLKI-QRAAERKK-----I 65
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ +Q F + L H + +L + + Y +
Sbjct: 66 DPQTFCDEISQTFRDLSKTLNLSNTDFIRTTEERHKKTVQHLWNELEKNDDIYLSKYSGW 125
Query: 154 FDTSSIPNYG 163
+ S Y
Sbjct: 126 YSVSDEAYYS 135
>gi|66808845|ref|XP_638145.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
gi|74996820|sp|Q54MZ8|SYMM_DICDI RecName: Full=Probable methionyl-tRNA synthetase, mitochondrial;
AltName: Full=Mitochondrial methionine--tRNA ligase;
Short=MtMetRS; Flags: Precursor
gi|60466665|gb|EAL64717.1| methionyl-tRNA synthetase [Dictyostelium discoideum AX4]
Length = 575
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 32/218 (14%), Positives = 63/218 (28%), Gaps = 39/218 (17%)
Query: 22 DPSNIRM-----YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-- 74
D + + YV GP HIG+ ++ D L R R+ + T TD
Sbjct: 41 DKKKVLITTPIFYVNGP-----PHIGHLYSALLGDALGRWNRFIGND---TLFMTGTDEH 92
Query: 75 ---IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+D E A++ D I+++ + F K + + H
Sbjct: 93 GSKVD----EAAKKNGLKTI--DYCDKISNRFRELFDKADIKY---DDFIRTTEPRHKEA 143
Query: 132 MIYLIQNIILHGHAYE--ANNEIIFDTSSIPNYGSF--------SRRKIDEQKMGTRVPE 181
+ + ++ G+ Y+ S + I ++ M +
Sbjct: 144 VTAIWNRLLERGYIYKGVYKGWYCTSDESFLTDDQVTEGMSPITPQNPISKKCMISLESG 203
Query: 182 KYHKKNPADFILWK--RSTPMEPGWESPWGRGRPGWHI 217
+ ++K + W P H+
Sbjct: 204 HEVNWIEEENYMFKLSEFSKTIENWFEEVKPIFPAIHV 241
>gi|330997427|ref|ZP_08321278.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
gi|329570801|gb|EGG52517.1| methionine--tRNA ligase [Paraprevotella xylaniphila YIT 11841]
Length = 679
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHKIIKDSFEEFGISFDVYGRTTSEVHCETASEFFRTLYDKGEFVE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|222617797|gb|EEE53929.1| hypothetical protein OsJ_00508 [Oryza sativa Japonica Group]
Length = 501
Score = 37.8 bits (86), Expect = 3.4, Method: Composition-based stats.
Identities = 10/47 (21%), Positives = 21/47 (44%), Gaps = 1/47 (2%)
Query: 404 NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF-ILEDYKNPD 449
N+ +++ +R L K + AD ++K + GF + D +
Sbjct: 228 NVPQEVQRTAADRAEALMTKNYQRADELQKIILDAGFRQVTDSRGGQ 274
>gi|296205501|ref|XP_002806975.1| PREDICTED: LOW QUALITY PROTEIN: ATP-binding cassette sub-family A
member 12-like [Callithrix jacchus]
Length = 2563
Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 18/156 (11%), Positives = 35/156 (22%), Gaps = 5/156 (3%)
Query: 72 ITDIDDKIIERA-RQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
TD DDKI+ R R + + + I+I+ ++F
Sbjct: 1673 FTDRDDKILTRGERLDGCGLLLKKIIAIL----IKRFHHTRRNWKGFIAQVILPIVFVTT 1728
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + + + ++ TS + + +
Sbjct: 1729 AMGLGTLRSSSNSYPEIQISPSLYGTSEQTAFYANYHPSTEALVSAMWDFPGVDNMCLNI 1788
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY 226
L W + CS
Sbjct: 1789 SDLQCLKKDSLEKWNTSGEPITNFGVCSCSENVQEC 1824
>gi|294494696|ref|YP_003541189.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
gi|292665695|gb|ADE35544.1| arginyl-tRNA synthetase [Methanohalophilus mahii DSM 5219]
Length = 567
Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+LR + Y N
Sbjct: 128 HVGHIRNSIIGDTLTRILRKAGYDVDAQYYVN 159
>gi|159128006|gb|EDP53121.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
fumigatus A1163]
Length = 1172
Score = 37.8 bits (86), Expect = 3.5, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
RE ++ Q + +L + + + + + + I+AL +
Sbjct: 506 RENLNARAQYERDQLMLQQYDRRVKDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWR 565
Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLIL---LKMKKFSSADYIR 432
++ L + +++ + + + A ++ +++R L LK K AD IR
Sbjct: 566 SKYEALAKLYSQLRQEHLDLLQTTKSLKLKAASAQEAIEKREKLERELKTKNLELADMIR 625
Query: 433 KQ 434
++
Sbjct: 626 ER 627
>gi|85714102|ref|ZP_01045091.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
gi|85699228|gb|EAQ37096.1| leucyl-tRNA synthetase [Nitrobacter sp. Nb-311A]
Length = 877
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DV+ R R
Sbjct: 46 GRIHIGHVRNYTLGDVIARYKRARGYN 72
>gi|308163205|gb|EFO65564.1| Methionyl-tRNA synthetase [Giardia lamblia P15]
Length = 572
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 22/142 (15%), Positives = 42/142 (29%), Gaps = 10/142 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V HIG+ ++ D L R + E TY+ TD + + + +
Sbjct: 15 VNGKPHIGHVFTTLLADTLKRFRKLQGFE---TYLMTGTD-----EHGQKVQQSAEKLGL 66
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEI 152
+ F L P R T H+ L + + G Y+ E
Sbjct: 67 QPQQWCDNMAKTFETYFLENFGLCPDFFMRTTMSKHVEMATKLWEKLRAVGLIYKDKYEG 126
Query: 153 IFDTSSIPNYGSFSRRKIDEQK 174
+ + + + + +
Sbjct: 127 WYCIADEAFVTETNLKDGVDAQ 148
>gi|291567306|dbj|BAI89578.1| (p)ppGpp 3-pyrophosphohydrolase [Arthrospira platensis NIES-39]
Length = 764
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 14/161 (8%)
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
I + T + ++ V L +T + + I+
Sbjct: 97 IEDTDVTPEELESNFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLAMAQDIRVIV 156
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK---- 403
L+ +++ T+ + +++ + + IF A+ LGI K L
Sbjct: 157 --VKLADRLHNMRTLEFMSE----SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFK 210
Query: 404 ----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
I+ V +R + + K + AD +R ++E G
Sbjct: 211 YIEPEAYREIQIRVADRRAIREEKLAALADILRDRMEKSGI 251
>gi|167519384|ref|XP_001744032.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777994|gb|EDQ91610.1| predicted protein [Monosiga brevicollis MX1]
Length = 616
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 42/170 (24%), Gaps = 10/170 (5%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
P V + H+GN ++ DV R R V +V TD E ++
Sbjct: 28 PYVNNVPHLGNIIGCVLSADVYARFARNQG--HTVLFVCG-TD-----EYGTATETKALA 79
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIIL-HGHAYEANN 150
I K +T ++ I +G + +
Sbjct: 80 EGMTPREICDKYHAIHKGVYEWFNISFDHFGRTSTPLQTEICQDIFKKCYANGFVQQKDE 139
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
+ + TS I + F K +P
Sbjct: 140 QQWYCTSCETFLADRFVEGICPDCGYDDARGDQCDECGHTFDAIKLKSPR 189
>gi|119719478|ref|YP_919973.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
gi|119524598|gb|ABL77970.1| arginyl-tRNA synthetase [Thermofilum pendens Hrk 5]
Length = 635
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+ R ++ D L RLLR E + +DD
Sbjct: 135 HVGHLRNGVLGDSLVRLLRARGHEVKAHF-----YVDD 167
>gi|284050030|ref|ZP_06380240.1| (p)ppGpp synthetase I (GTP pyrophosphokinase), SpoT/RelA
[Arthrospira platensis str. Paraca]
Length = 749
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 53/161 (32%), Gaps = 14/161 (8%)
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
I + T + ++ V L +T + + I+
Sbjct: 82 IEDTDVTPEELESNFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLAMAQDIRVIV 141
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK---- 403
L+ +++ T+ + +++ + + IF A+ LGI K L
Sbjct: 142 --VKLADRLHNMRTLEFMSE----SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFK 195
Query: 404 ----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
I+ V +R + + K + AD +R ++E G
Sbjct: 196 YIEPEAYREIQIRVADRRAIREEKLAALADILRDRMEKSGI 236
>gi|91206117|ref|YP_538472.1| arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
gi|157826450|ref|YP_001495514.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
gi|109895031|sp|Q1RGY1|SYR_RICBR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|166232833|sp|A8GUI1|SYR_RICB8 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|91069661|gb|ABE05383.1| Arginyl-tRNA synthetase [Rickettsia bellii RML369-C]
gi|157801754|gb|ABV78477.1| arginyl-tRNA synthetase [Rickettsia bellii OSU 85-389]
Length = 576
Score = 37.8 bits (86), Expect = 3.6, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 15/30 (50%), Gaps = 2/30 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
PT HIG+AR + DVL +L+
Sbjct: 128 PT--GPMHIGHARGAVYGDVLANILKKVGY 155
>gi|307710204|ref|ZP_07646648.1| glutamyl-tRNA synthetase [Streptococcus mitis SK564]
gi|307619184|gb|EFN98316.1| glutamyl-tRNA synthetase [Streptococcus mitis SK564]
Length = 486
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 45/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|188994145|ref|YP_001928397.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
gi|226710912|sp|B2RHF5|SYM_PORG3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|188593825|dbj|BAG32800.1| methionyl-tRNA synthetase [Porphyromonas gingivalis ATCC 33277]
Length = 680
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 38/163 (23%), Gaps = 30/163 (18%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGE---------KCVTYVRNITDIDDKIIERARQE 86
HIG+ + D+ R LR + V I +A+ E
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGV-----------PIALKAKAE 67
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGH 144
+ + + + + L R T+ H + + G
Sbjct: 68 GCT------PQEVVDRYHELIKRSFEGLGIS-FDIYSRTTSDIHRRTASEFFKTLYEKGE 120
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + R +
Sbjct: 121 FVEQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEAC 163
>gi|170590117|ref|XP_001899819.1| protein ZK524.3 [Brugia malayi]
gi|158592738|gb|EDP31335.1| protein ZK524.3, putative [Brugia malayi]
Length = 878
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 12/42 (28%), Positives = 16/42 (38%), Gaps = 5/42 (11%)
Query: 27 RMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
MY P H+G+ R + DVL R R V +
Sbjct: 72 SMY---PYPSGRLHMGHMRVYTISDVLARYYRLNGY--NVIH 108
>gi|320328489|gb|EFW84491.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
gi|330885656|gb|EGH19805.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. glycinea str.
race 4]
Length = 499
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|268325101|emb|CBH38689.1| valyl-tRNA synthetase [uncultured archaeon]
Length = 810
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 11/29 (37%), Positives = 13/29 (44%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
PTV HIG+A I D + R R
Sbjct: 44 PTVSGNMHIGHAMAYIQADTIMRFQRMQG 72
>gi|116252220|ref|YP_768058.1| methionyl-tRNA synthetase [Rhizobium leguminosarum bv. viciae 3841]
gi|115256868|emb|CAK07962.1| putative methionyl-tRNA synthetase [Rhizobium leguminosarum bv.
viciae 3841]
Length = 516
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+ + AR E +
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--KDVFF---LTGTDEHGQKMQQTARAEGITA----- 69
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F T L H + + + G Y+ + +
Sbjct: 70 -QALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADSGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|34540030|ref|NP_904509.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
gi|68565991|sp|Q7MXK7|SYM_PORGI RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|34396341|gb|AAQ65408.1| methionyl-tRNA synthetase [Porphyromonas gingivalis W83]
Length = 680
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 20/163 (12%), Positives = 38/163 (23%), Gaps = 30/163 (18%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGE---------KCVTYVRNITDIDDKIIERARQE 86
HIG+ + D+ R LR + V I +A+ E
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLRGRDCLLIGGSDEHGV-----------PIALKAKAE 67
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGH 144
+ + + + + L R T+ H + + G
Sbjct: 68 GCT------PQEVVDRYHELIKRSFEGLGIS-FDIYSRTTSDIHRRTASEFFKTLYEKGE 120
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + R +
Sbjct: 121 FVEQTSEQYYDEEAKQFLADRYIIGTCPHCSNDRAYGDQCEAC 163
>gi|282165349|ref|YP_003357734.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
gi|282157663|dbj|BAI62751.1| arginyl-tRNA synthetase [Methanocella paludicola SANAE]
Length = 564
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 7/45 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PT H+G R ++ D L R++R + V Y +DD
Sbjct: 122 PT--GPLHVGRGRNPVIGDTLARVMRSGGYDVQVQY-----YVDD 159
>gi|218461098|ref|ZP_03501189.1| methionyl-tRNA synthetase [Rhizobium etli Kim 5]
Length = 272
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 24/132 (18%), Positives = 43/132 (32%), Gaps = 15/132 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+A +I D + R R K V + +T D+ K+ + AR E
Sbjct: 20 PHIGHAYELIATDAMARYQRLDG--KDVFF---LTGTDEHGQKMQQTARAEGIE------ 68
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +N+ +F T L H + + + +G Y+ + +
Sbjct: 69 PQALADRNSGEFQAMATLLNASNDDFIRTTQERHHETSRNIWKLMADNGDIYKDSYAGWY 128
Query: 155 DTSSIPNYGSFS 166
Y
Sbjct: 129 SVRDEAYYQENE 140
>gi|78778625|ref|YP_396737.1| isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
gi|123554705|sp|Q31CU4|SYI_PROM9 RecName: Full=Isoleucyl-tRNA synthetase; AltName:
Full=Isoleucine--tRNA ligase; Short=IleRS
gi|78712124|gb|ABB49301.1| Isoleucyl-tRNA synthetase [Prochlorococcus marinus str. MIT 9312]
Length = 968
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 44/255 (17%), Positives = 80/255 (31%), Gaps = 15/255 (5%)
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
+ NEI+ ++ I + + V + LWK+ T W
Sbjct: 498 KKNGNEILLNSEIINHIQKLFSEHGADIWWDWDVKHLLPDNYVKESDLWKKGTDTMDVWF 557
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
W C S L D++ G D ++ + S + +
Sbjct: 558 DSGS----SWAAVCEQRSE--LKYPADLYLEGSDQHRGWFQSSLLTSVAVNNKPPYKKVL 611
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLET--KKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
H L+ GRKMSKS GN + N ++ K ++ A V+RL + Y +
Sbjct: 612 THGFALDENGRKMSKSLGNVVDPNIIINGGNNKKIEPAYGADVLRLWVSSVDYSVDVPIG 671
Query: 324 VQRLTEAEILLSKWPQT------STSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTK 377
L + + K T + + L + L ++ + +
Sbjct: 672 SNILKQLSDVYRKVRNTARYLLGNIHDYDPNIDSFEIDQLPLLDQWMLGRLVEVTDQISN 731
Query: 378 NHDLLPIFNASAHIL 392
++ F+ IL
Sbjct: 732 AYENYE-FSKFFQIL 745
>gi|15674035|ref|NP_268210.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|281492710|ref|YP_003354690.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
gi|30173209|sp|Q9CDZ7|SYE_LACLA RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|12725104|gb|AAK06151.1|AE006435_9 glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis Il1403]
gi|281376367|gb|ADA65857.1| Glutamyl-tRNA synthetase [Lactococcus lactis subsp. lactis KF147]
Length = 483
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 41/377 (10%), Positives = 93/377 (24%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G+ + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLFARHHGGDFIIR----IEDTDRERHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILH 142
E+ + + + L + + ++
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLTEGKAYYSYKTPEELEADHAK 118
Query: 143 GHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI----LWK 195
A S + RK + R+ + I +
Sbjct: 119 QEAAGIAPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIVKGDIEF 178
Query: 196 RSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
+ W G P ++ + H +
Sbjct: 179 EGKNIGGDWVIQKRDGYPTYNFAVVVDDHD--------MQISHVIRGDDHIANTPKQLVV 230
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ L + K + + +E + + + + I + +
Sbjct: 231 YDALGWEAPQFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMSDAIFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L L N+ + + +L +
Sbjct: 289 WNPGGEKEIFSREELIELFDEHRLSKSPAA-FDQKKLDWLDNEYIKNADFAKVFELTKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
+ + +
Sbjct: 348 LVAANRFDERAEELVKL 364
>gi|88808557|ref|ZP_01124067.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. WH 7805]
gi|88787545|gb|EAR18702.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. WH 7805]
Length = 878
Score = 37.8 bits (86), Expect = 3.7, Method: Composition-based stats.
Identities = 21/97 (21%), Positives = 33/97 (34%), Gaps = 14/97 (14%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R R V + D A E+ +I
Sbjct: 65 HMGHVRNYVITDVIARAQRMRG--DAVLHPMG---WD------AFGLPAENAAIERQIDP 113
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
I T +N +Q RL + +AT H
Sbjct: 114 GIWTDRNIEQMKAQLDRLGLSIDWSREQATCHADYYR 150
>gi|307705742|ref|ZP_07642587.1| glutamyl-tRNA synthetase [Streptococcus mitis SK597]
gi|307620660|gb|EFN99751.1| glutamyl-tRNA synthetase [Streptococcus mitis SK597]
Length = 486
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 45/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLDLYQKYIDKLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|332882170|ref|ZP_08449804.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
gi|332679921|gb|EGJ52884.1| methionine--tRNA ligase [Capnocytophaga sp. oral taxon 329 str.
F0087]
Length = 679
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHKIIKDSFEEFGISFDVYGRTTSKVHCETASEFFRTLYDKGEFVE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D +K
Sbjct: 124 KTSMQYYDEEVHTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|312864262|ref|ZP_07724496.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
gi|311100263|gb|EFQ58472.1| valine--tRNA ligase [Streptococcus vestibularis F0396]
Length = 883
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 71/212 (33%), Gaps = 21/212 (9%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S G D+IF I QS
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 496
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N+ IH + +GRKMSKS GN I +++E + A +R +
Sbjct: 497 EFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSN 549
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTS------------KGIIDPAVLSALYNDLN 360
+ + F+ +++ + ++K S V++ ++
Sbjct: 550 GSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNKGLTLDVARENVAKVVAGQAGNVT 609
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
+ L++ + T+N D F + HIL
Sbjct: 610 DHWILHNLNETIGKVTENFDKFE-FGVAGHIL 640
>gi|228991575|ref|ZP_04151519.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
gi|228768144|gb|EEM16763.1| Lysyl-tRNA synthetase [Bacillus pseudomycoides DSM 12442]
Length = 519
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 57/419 (13%), Positives = 111/419 (26%), Gaps = 74/419 (17%)
Query: 30 VC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--------KI 79
VC G + HIGN R +I + R L+ + + DD K
Sbjct: 22 VCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFS-----WDDYDRFRKVPKN 76
Query: 80 IERARQEHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
++ + +++ +P D ++F K +
Sbjct: 77 VDSSFEKYIGMPYCDIPDPYGCHKSYAEHFEKEFEKSLETFGIDVEFIYQHEEYRTGRYN 136
Query: 134 YLIQNIILHGH-------------AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP 180
I + E EI + + KI +
Sbjct: 137 QHILQALKRRKEIYDVLMKFKTSEPSEDEREIFYPITLYCEQCGKDSTKITNFDETSETI 196
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDL 240
+ + + +++ M+ W+ W W IE GG D
Sbjct: 197 RYECECGSHNVLSVTQTSHMKLNWKIDWPM---RWMIEDVIFEP-----------GGRDH 242
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
+++ + A ++ F+ + +KMS S GN IT +ELL
Sbjct: 243 SAETGSYNVSKEIASKIFNYEAPNYVAYDFIGIKGNNQKMSSSAGNIITPSELLNV---- 298
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
+ VI + + + ++ +
Sbjct: 299 ---YLPEVILFMFSKYKPNAAFHIGMDEDVIRNYTEYERYKEGCQNNKLNNEEFRDVIR- 354
Query: 359 LNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNKNISIAIEK---LVQ 414
+ + LP FN A +L + H+ + I ++ L+
Sbjct: 355 -------------LSGVSDENASLPKFNQVAGVLPLVNFDTHILQEILAKVDADYSLID 400
>gi|222150239|ref|YP_002551196.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
gi|254782480|sp|B9JV46|SYL_AGRVS RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|221737221|gb|ACM38184.1| leucyl-tRNA synthetase [Agrobacterium vitis S4]
Length = 876
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 23/153 (15%), Positives = 46/153 (30%), Gaps = 17/153 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPIN 93
HIG+ R + DV+ R R V + D A E+ ++
Sbjct: 47 GRIHIGHVRNYAMGDVVARYKRARGY--NVLHPMG---WD------AFGMPAENAAMQNK 95
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANN 150
T +N + + AT + + YL +++ G Y +
Sbjct: 96 VHPKDWTYQNIASMRAQLKSMGLSLDWSREFATCDVEYYQRQQYLFLDMMEKGLVYRKQS 155
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
++ +D + + G V ++
Sbjct: 156 KVNWDPVDQTVLANEQVIDGRGWRSGALVEQRE 188
>gi|163858414|ref|YP_001632712.1| methionyl-tRNA synthetase [Bordetella petrii DSM 12804]
gi|163262142|emb|CAP44444.1| metG [Bordetella petrii]
Length = 691
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 15/87 (17%), Positives = 27/87 (31%), Gaps = 16/87 (18%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ I D+ R +R V +V DD I+ +A +E S
Sbjct: 19 HIGHIMEYIQADIWVRSMRMAG--HTVHFV----GADDAHGAPIMLKAEKEGIS------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQ 122
+ ++ + +
Sbjct: 67 PQELVARYAAERPRYLDGFHIRFDHWH 93
>gi|84490249|ref|YP_448481.1| isoleucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|84373568|gb|ABC57838.1| IleS [Methanosphaera stadtmanae DSM 3091]
Length = 1055
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 33/207 (15%), Positives = 66/207 (31%), Gaps = 16/207 (7%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
R + W G H + + +D G D +++
Sbjct: 519 MHRVPDVLDVWIDSGVAGWAALHYPQNPSENFDEWFPYDFITEGHDQTRGWFYSQLGLGV 578
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML- 312
A + +H L+ +G+KMSKS GN ++ E++E + A V+R +L
Sbjct: 579 AAFGKAPYKKVLMHGFTLDEDGKKMSKSLGNVVSPEEVIE-------KYGADVLRFYLLD 631
Query: 313 MTHYREPIDFTVQRLTEAEILL------SKWPQTSTSKGIIDPAVLSALYNDLNTVSAI- 365
+ + F + + L + T S +P +
Sbjct: 632 ANKPWDDLKFHWDEVQNSSKLFNILWNVYYFATTYMSLDNFNPTKHNRDDLIFREEDLWI 691
Query: 366 -QALHKLARESTKNHDLLPIFNASAHI 391
++ L + ++ + L A+ I
Sbjct: 692 ESRINSLIKSVGEDIESLVFNRATEKI 718
>gi|47570442|ref|ZP_00241078.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
gi|47552900|gb|EAL11315.1| methionyl-tRNA synthetase [Bacillus cereus G9241]
Length = 120
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 27/89 (30%), Gaps = 14/89 (15%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 22 HIGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTP 70
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+ ++
Sbjct: 71 QAYVDNIVAGIKELWEKMDISYDDFIRTT 99
>gi|153956357|ref|YP_001397122.1| methionyl-tRNA synthetase [Clostridium kluyveri DSM 555]
gi|219856672|ref|YP_002473794.1| hypothetical protein CKR_3329 [Clostridium kluyveri NBRC 12016]
gi|146349215|gb|EDK35751.1| MetS [Clostridium kluyveri DSM 555]
gi|219570396|dbj|BAH08380.1| hypothetical protein [Clostridium kluyveri NBRC 12016]
Length = 644
Score = 37.8 bits (86), Expect = 3.8, Method: Composition-based stats.
Identities = 57/421 (13%), Positives = 100/421 (23%), Gaps = 95/421 (22%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A +
Sbjct: 20 HIGNTYTTVAADALARFKRITGYD-----VMLLTGTDEHGQKIQRLAEAKGV------PP 68
Query: 97 SIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EANNEII 153
+ + + HI + + + + G Y
Sbjct: 69 KEYVDEIVAGIKDLWKIMNINYDKFIRTTEKYHIAAVQKIFKKLYDQGDIYKGNYEGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP---- 207
S K + ++ Y K + P + P
Sbjct: 129 TPCESFWTETQLIDGKCPDCGRTVEKAKEEAYFFKMSKYAPALIKHIETHPDFIQPESRK 188
Query: 208 ---------------------WGRGRP-----------------------GWHIECSAMS 223
+ G P G+ E +
Sbjct: 189 NEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDNKHVIYVWIDALANYITALGYGSEDDKLY 248
Query: 224 SHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNG 283
Y ++H G D++ H E+ +G+L ++G KMSKS G
Sbjct: 249 KKYW--PANVHLVGKDILRFHTIYWPIMLMALG--EEIPEKVFGHGWLLVDGGKMSKSKG 304
Query: 284 NFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTE 329
N + L+ + + + + + + T
Sbjct: 305 NVVDPVVLVNHFGTDAVRYYLLREIPFGADGLFNNEIFIKKINSDLANDLGNLLSRTCTM 364
Query: 330 AEILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNH 379
E K ID P + N L A+ ++ +L + K
Sbjct: 365 IEKYFDGIMPAPKEKEDIDDELIGLALDIPIKIEKHMNHLRIPEALDSIWELVSRTNKYI 424
Query: 380 D 380
D
Sbjct: 425 D 425
>gi|315428000|dbj|BAJ49589.1| isoleucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 1062
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PTV + HIG+ R + D++ R
Sbjct: 49 PTVNGYMHIGHTRGRVYKDIVLRYKTMRGYN 79
>gi|307726917|ref|YP_003910130.1| Beta-lactamase [Burkholderia sp. CCGE1003]
gi|307587442|gb|ADN60839.1| Beta-lactamase [Burkholderia sp. CCGE1003]
Length = 315
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 7/40 (17%), Positives = 14/40 (35%), Gaps = 8/40 (20%)
Query: 417 LILLKMKKFSSADYIRKQLES--------KGFILEDYKNP 448
+ ++F+ D IR +L G + D +
Sbjct: 38 QAARQRREFARLDAIRARLVEIEAQSGGRLGVSIVDTTSG 77
>gi|289167061|ref|YP_003445328.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Streptococcus
mitis B6]
gi|288906626|emb|CBJ21460.1| glutamyl-tRNA synthetase (glutamate--tRNA ligase) [Streptococcus
mitis B6]
Length = 486
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 45/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSKEEKAAYIAEREAAGVIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|145591957|ref|YP_001153959.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
gi|166232828|sp|A4WLP0|SYR_PYRAR RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|145283725|gb|ABP51307.1| arginyl-tRNA synthetase [Pyrobaculum arsenaticum DSM 13514]
Length = 630
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
HIG+ R I+ D L RLLR+ V + +DD
Sbjct: 127 HIGHGRNAILGDSLARLLRFCDNRVEVHF-----YVDD 159
>gi|51893806|ref|YP_076497.1| glutamyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
gi|77416470|sp|Q67KZ3|GLUQ_SYMTH RecName: Full=Glutamyl-Q tRNA(Asp) synthetase; Short=Glu-Q-RSs
gi|51857495|dbj|BAD41653.1| glutamyl-tRNA synthetase [Symbiobacterium thermophilum IAM 14863]
Length = 323
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 28/186 (15%), Positives = 45/186 (24%), Gaps = 36/186 (19%)
Query: 31 CG---PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQ 85
CG PT H+GNAR ++ L R G ++ I DID RAR
Sbjct: 3 CGRFAPTPSGALHLGNARTALLA-----WLHARRAGG----RFILRIEDID-----RAR- 47
Query: 86 EHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA 145
S P + + P + L ++ + A
Sbjct: 48 ---SRPH------LAEQAIADLRWLGLDWDEGPDVGGPHGPYCQSEREELYRDALARLQA 98
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVP-------EKYHKKNPADFILWKRST 198
+ + S E + + + L
Sbjct: 99 EGRLYPCYCSRAQLMAIASAPHGLTSEGPAYPGTCRRLTPEERRAREADGKTPSLRFALP 158
Query: 199 PMEPGW 204
E +
Sbjct: 159 DEEIAF 164
>gi|325286637|ref|YP_004262427.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
gi|324322091|gb|ADY29556.1| Methionyl-tRNA synthetase [Cellulophaga lytica DSM 7489]
Length = 692
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 26/164 (15%), Positives = 44/164 (26%), Gaps = 21/164 (12%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK---IIERAR 84
Y GP HIG+ + D+ R LR K V +V D+ I +A+
Sbjct: 19 YTNGP-----IHIGHLAGVYVPADIYARYLR--GINKDVAFVCG---SDEHGVAISMKAK 68
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLA-CLAPTHQPRATNHIPQMIYLIQNIILHG 143
+E + + K K + A H +N+ G
Sbjct: 69 KEGIT------PKQVIDKYHAIIKKSFLDFGITFDNYSRTSAQVHHDTASEFFKNLYDKG 122
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E E ++D + + +
Sbjct: 123 DFIEETTEQLYDAEAKQFLADRFVIGTCPKCGHEEAYGDQCENC 166
>gi|300814290|ref|ZP_07094562.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300511557|gb|EFK38785.1| methionine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 653
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 50/418 (11%), Positives = 100/418 (23%), Gaps = 81/418 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D + R T T D+ KI +A++
Sbjct: 16 DNLHIGHTYCTVAADCIKRFKELQGYNVFFT-----TGTDEHGQKIATKAQEAGMEPKAY 70
Query: 94 DA---------ISII----------TSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQ 131
+ T ++ V+D + P
Sbjct: 71 VDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGEYEGYYCTPC 130
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ Q + HA + T + S+ K + E +
Sbjct: 131 ESFWTQAQVGDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNNEEFTEPAFRKNE 190
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIE-----------------CSAMSSHYLGK----- 229
++ E + R W ++ C + +
Sbjct: 191 LIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLSAIEFGTDKEKFN 250
Query: 230 ---VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
D+H G ++ H A D +G++ + KMSKS GN +
Sbjct: 251 EFWPADVHLVGKEIFRFHALIWPALLMALD--LPLPKKIFGHGWILFDNDKMSKSKGNVV 308
Query: 287 TINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
+++ + + + + + ++
Sbjct: 309 YPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLGNLLSRTVSMITK 368
Query: 333 LLSKWPQTSTSKGIIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ + ID + A++ + KL R S K D
Sbjct: 369 YNDGIIEKPNREEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWKLIRRSNKYVD 426
>gi|255318346|ref|ZP_05359581.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262379088|ref|ZP_06072244.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
gi|255304658|gb|EET83840.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SK82]
gi|262298545|gb|EEY86458.1| methionyl-tRNA synthetase [Acinetobacter radioresistens SH164]
Length = 686
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 16/63 (25%), Positives = 23/63 (36%), Gaps = 10/63 (15%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R +R + VTYV DD I+ RA +
Sbjct: 15 GPIHMGHLLGYIQADIWVRAMRAMGHD--VTYVC----ADDAHGTAIMLRAEANGITPEE 68
Query: 93 NDA 95
A
Sbjct: 69 QIA 71
>gi|170103074|ref|XP_001882752.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164642123|gb|EDR06380.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 588
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 21/133 (15%), Positives = 43/133 (32%), Gaps = 23/133 (17%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDA- 95
HIG+ +++ D+ R R + V ++ TD + KI + A +
Sbjct: 54 PHIGHLYTLVLGDIFARYQRILDPTRPVHFLAG-TD-EHGLKIQQAAEKAGVEPKSFCDS 111
Query: 96 ----ISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + A ++ T R T H + ++ + G Y+
Sbjct: 112 LSGKFRELADR------------ARISYTVYMRTTQEQHKKAVEHVWLTLDRKGFIYKGQ 159
Query: 150 NEIIFDTSSIPNY 162
E + + Y
Sbjct: 160 YEGWYSITDECFY 172
>gi|110004172|emb|CAK98510.1| probable methionyl-trna synthetase transmembrane protein
[Spiroplasma citri]
Length = 526
Score = 37.8 bits (86), Expect = 3.9, Method: Composition-based stats.
Identities = 13/60 (21%), Positives = 24/60 (40%), Gaps = 8/60 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIPINDAI 96
HIG+A + D+L R + E +T D +KI ++A+ + +
Sbjct: 22 HIGHAYTTTLADILNRYKKMAGYETFF-----LTGSDEHGEKIEKKAKTAGITPYQFITM 76
>gi|330985496|gb|EGH83599.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 499
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELM 168
>gi|225175106|ref|ZP_03729102.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
gi|225169282|gb|EEG78080.1| leucyl-tRNA synthetase [Dethiobacter alkaliphilus AHT 1]
Length = 822
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 12/52 (23%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 14 KITEF-QAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYG 62
+ +F + + + YV P H+G+ R + DVL R L
Sbjct: 18 EKEDFYKTDEEGKKKYYVLEMFPYPSGRLHMGHMRVYSIGDVLARFLNMRGY 69
>gi|156370835|ref|XP_001628473.1| predicted protein [Nematostella vectensis]
gi|156215450|gb|EDO36410.1| predicted protein [Nematostella vectensis]
Length = 265
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 12/134 (8%), Positives = 23/134 (17%)
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ DT +C + + E I
Sbjct: 114 WYGDQCDRYCIATHDDTAAFSCSETGEKVCHKGWYGTNCERHCVRTRNSVCSNITGERIC 173
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPG 214
+ ++Q + K + + + GW P P
Sbjct: 174 NKGWHGVNCDTYCMPRNDQNAAYSCDKDGKKACFPLWYGSECDKSCKFGWYGPQCDCSPK 233
Query: 215 WHIECSAMSSHYLG 228
G
Sbjct: 234 DDKTAGYTCDKLTG 247
>gi|315426678|dbj|BAJ48304.1| isoleucyl-tRNA synthetase [Candidatus Caldiarchaeum subterraneum]
Length = 1062
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 9/31 (29%), Positives = 14/31 (45%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PTV + HIG+ R + D++ R
Sbjct: 49 PTVNGYMHIGHTRGRVYKDIVLRYKTMRGYN 79
>gi|289628912|ref|ZP_06461866.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
NCPPB3681]
gi|289646874|ref|ZP_06478217.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
2250]
Length = 499
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDFQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|282883266|ref|ZP_06291864.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281296896|gb|EFA89394.1| methionine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 653
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 50/418 (11%), Positives = 101/418 (24%), Gaps = 81/418 (19%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D + R T T D+ KI +A++
Sbjct: 16 DNLHIGHTYCTVAADCIKRFKELQGYNVFFT-----TGTDEHGQKIATKAQEAGMEPKAY 70
Query: 94 DA---------ISII----------TSKNTQQFVKDTTRLACLAPTHQPRA---TNHIPQ 131
+ T ++ V+D + P
Sbjct: 71 VDKIVANIKKLWESLDIQYDAFIRSTDAQHEKDVQDLFKKLYDKGDIYKGEYEGYYCTPC 130
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ Q + HA + T + S+ K + E +
Sbjct: 131 ESFWTQAQVGDDHACPDCGRVTQLTKEESYFFRLSKYKDKLLDLLNNNEEFTEPAFRKNE 190
Query: 192 ILWKRSTPMEPGWESPWGRGRPGWHIE-----------------CSAMSSHYLGK----- 229
++ E + R W ++ C + +
Sbjct: 191 LIKNFIESAEGLEDLSVSRSSLTWGVQVPFDNKHVIYVWIDALLCYLSAIEFGTDKEKFN 250
Query: 230 ---VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFI 286
D+H G ++ H A D +G++ + KMSKS GN +
Sbjct: 251 EFWPADVHLVGKEIFRFHALIWPALLMALD--LPLPKKIFGHGWILFDNDKMSKSKGNVV 308
Query: 287 TINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEI 332
+++ + + + + + ++
Sbjct: 309 YPEPIIKLYGVDALKYFLLREFSFGSDGSFTKEKFMQRLNSDLANDLGNLLSRTVSMITK 368
Query: 333 LLSKWPQTSTSKGIIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
+ + + ID + A++ + KL R S K D
Sbjct: 369 YNNGIIEKPKIEEEIDKDLENMAISVKAKVEEAMEHFKFNVALEEIWKLIRRSNKYVD 426
>gi|189465160|ref|ZP_03013945.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
17393]
gi|189437434|gb|EDV06419.1| hypothetical protein BACINT_01505 [Bacteroides intestinalis DSM
17393]
Length = 679
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ I + + + + H + + G E
Sbjct: 70 T------PQDIVDRYHTLIKESFKEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|330980484|gb|EGH78587.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aptata str. DSM
50252]
Length = 499
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 25/170 (14%), Positives = 51/170 (30%), Gaps = 20/170 (11%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R E V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFPRVQRQRGHECVLVSY------SDDYQSYMLRKGLEQD 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAY 146
+ +N+ + + N + + + + A
Sbjct: 65 VD------PVELARRNSDRIEASLAAINIQPDNWMRPHDNPWFAEAVGEVFGTLRDAGAI 118
Query: 147 EANNEI--IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
E + + Y +F+R + + + + D L
Sbjct: 119 ECRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|330799736|ref|XP_003287898.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
gi|325082101|gb|EGC35595.1| hypothetical protein DICPUDRAFT_152073 [Dictyostelium purpureum]
Length = 566
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 27/168 (16%), Positives = 53/168 (31%), Gaps = 27/168 (16%)
Query: 21 IDPSNIRM-----YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD- 74
I+ I + YV GP HIG+ ++ D R R+ + TY TD
Sbjct: 31 INKKKILITTPIFYVNGP-----PHIGHLYTALLGDAFARWNRFKGND---TYFMTGTDE 82
Query: 75 ----IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
+D E A+++ D I+++ + F + + H
Sbjct: 83 HGMKVD----EAAKKKGLKTI--DYCDSISNRFKELFKLSEIQY---DDFIRTTEPRHRD 133
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + ++ G+ Y+ + + TS +
Sbjct: 134 AVTAMWNRLLEKGYIYKGVYKGWYCTSDESFLTDDQVMEGMSPITPNN 181
>gi|224129132|ref|XP_002328898.1| predicted protein [Populus trichocarpa]
gi|222839328|gb|EEE77665.1| predicted protein [Populus trichocarpa]
Length = 801
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 19/136 (13%), Positives = 38/136 (27%), Gaps = 21/136 (15%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 26 PYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA--IYICG-TD----------EYGTATE 72
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ N I K + ++ ++ I + + +
Sbjct: 73 TKAMEENSTPKQICDKYHAIHREVYKWFNISFDEFGRTSSPQQTEVCQAIFKKLLDNNWL 132
Query: 145 AYEANNEIIFDTSSIP 160
+ ++ DT
Sbjct: 133 SENTMKQLYCDTCERF 148
>gi|161087222|gb|ABX56707.1| calcium-dependent nuclease [Cucumis sativus]
gi|241898438|gb|ACS71330.1| calcium-dependent nuclease [Cucumis sativus]
Length = 334
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 7/38 (18%), Positives = 15/38 (39%)
Query: 405 ISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ + +R K F+ AD + K + G+ +
Sbjct: 171 VPKEVRNAALQRSRARNAKNFAKADALHKTITDAGYRV 208
>gi|182624277|ref|ZP_02952062.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|177910495|gb|EDT72868.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
Length = 514
Score = 37.8 bits (86), Expect = 4.0, Method: Composition-based stats.
Identities = 25/131 (19%), Positives = 47/131 (35%), Gaps = 17/131 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG + D+L R R V +V D ++ +A++ IN +
Sbjct: 17 HIGRVSSWMAGDILARYHRAKG--DEVIFVSG----SDCHGSPVLNKAKE------INKS 64
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ +K ++FV+ +L + H Q+ +I+++ G YE E +
Sbjct: 65 PEELINKYHREFVRCFNKLGFSFDIFTRTDSEYHEKQVKNIIKSLYNKGFIYEKETEEFY 124
Query: 155 DTSSIPNYGSF 165
F
Sbjct: 125 CPKCCDTLDEF 135
>gi|172038489|ref|YP_001804990.1| arginyl-tRNA synthetase [Cyanothece sp. ATCC 51142]
gi|226710999|sp|B1X0N5|SYR_CYAA5 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|171699943|gb|ACB52924.1| arginyl-tRNA-synthetase [Cyanothece sp. ATCC 51142]
Length = 585
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R L + E + +V
Sbjct: 132 MHVGHLRSTIIGDCIARTLEFLGYEVLRLNHV 163
>gi|284159400|ref|YP_441412.3| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
gi|83654898|gb|ABC38961.1| methionyl-tRNA synthetase [Burkholderia thailandensis E264]
Length = 770
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 85 IHIGHLVEYIQTDIWARTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 133
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 134 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQA 192
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y + +
Sbjct: 193 YDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 239
>gi|88811010|ref|ZP_01126266.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
gi|88791549|gb|EAR22660.1| Methionyl-tRNA synthetase, class Ia [Nitrococcus mobilis Nb-231]
Length = 678
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 41/161 (25%), Gaps = 17/161 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + E YV DD I+ +AR++ +
Sbjct: 16 GPIHLGHLVEYIQTDIWVRFQKLQGNECY--YVC----ADDAHGTPIMLKAREQGIT--- 66
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIY-LIQNIILHGHAYEANNE 151
+ + + D + + + + + GH
Sbjct: 67 ---PEELIERFGTEHQADFAAFLIEFDNYYTTHSAENRHFATLIYERLRDAGHIERREIT 123
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
FD + + + + A +
Sbjct: 124 QAFDPQMNMFLPDRYIKGTCPRCAASDQYGDNCEVCGASYS 164
>gi|302672159|ref|YP_003832119.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
gi|302396632|gb|ADL35537.1| methionyl-tRNA synthetase MetG [Butyrivibrio proteoclasticus B316]
Length = 679
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 24/175 (13%), Positives = 50/175 (28%), Gaps = 10/175 (5%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN+ +++ D + R R + V + T D+ KI RA + + P +
Sbjct: 20 PHIGNSYEIVLADAIARYKRRDGFD--VHFQ---TGSDEHGQKIETRAIEAGCASP-KEF 73
Query: 96 ISIITSKNTQQFV-KDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++ + DT+ + T ++ +Y+
Sbjct: 74 VDQVSDTIKGLWNLMDTSYDRFIRTTDDDHVKQVQKIFKRFYDQGDIYKGSYKGMYCTEC 133
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
+ + + + E Y K P + P
Sbjct: 134 EAFYTESQLKDGKCPECGGPVHPAEEEAYFFKMSKYADKLIDYINTHPEFIQPVS 188
>gi|297716061|ref|XP_002834367.1| PREDICTED: hypothetical protein LOC100447596 [Pongo abelii]
Length = 1623
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 15/89 (16%), Positives = 37/89 (41%), Gaps = 9/89 (10%)
Query: 366 QALHKLARESTKNHDLLPIFNASAHILGIEVCKEHL---NKNISIAIEKLVQERLILLKM 422
+ L + + + + +GIE+ ++ L +K++ + +++ V ++L++
Sbjct: 320 KRLLDGIKTIKRGKVDINNLDKFLENMGIELSEKELEDFSKDLPVDVDEKVDLNNVMLRI 379
Query: 423 KKF--SSADYIRKQ---LESKGFILEDYK 446
K F D R L G + D +
Sbjct: 380 KDFTGEKVDA-RDLKNVLGDMGIEVNDKE 407
>gi|156847411|ref|XP_001646590.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
70294]
gi|156117268|gb|EDO18732.1| hypothetical protein Kpol_1055p89 [Vanderwaltozyma polyspora DSM
70294]
Length = 753
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R ++ DVL R +
Sbjct: 78 HLGHLRVYVISDVLNRFYKLNGYN 101
>gi|320592228|gb|EFX04667.1| methionyl-tRNA synthetase [Grosmannia clavigera kw1407]
Length = 630
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 8/22 (36%), Positives = 12/22 (54%)
Query: 35 VYDFAHIGNARPMIVFDVLYRL 56
V H+G+ M++ DVL R
Sbjct: 56 VNSDPHVGHMYSMVLADVLKRW 77
>gi|125625093|ref|YP_001033576.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
MG1363]
gi|166226832|sp|A2RNK5|SYE_LACLM RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|124493901|emb|CAL98895.1| glutamyl-tRNA synthetase [Lactococcus lactis subsp. cremoris
MG1363]
Length = 483
Score = 37.8 bits (86), Expect = 4.1, Method: Composition-based stats.
Identities = 45/378 (11%), Positives = 103/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G+ + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLFARHHGGDFIIR----IEDTDRERHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH--QPRATNHIPQMIYLIQNIILH 142
E+ + + + L + + ++
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLPLYQKYIDQLLAEGKAYYSYKTPEELEADHAK 118
Query: 143 GHAYEANNEI---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
A S + RK + R+ + I+ K
Sbjct: 119 QEAAGIPPHYINEYAGMSDDEKAAYIAERKAQNIEPVVRISVDEKAIYKWNDIV-KGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + + ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKRDGYPTYNF--AVVVDDHDMQISHVIRGDDHIANTPKQL---VVYN 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + I + +
Sbjct: 233 ALGWEAP---QFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMSDAIFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR- 373
+ + + E L + + + D L + N+ + + +L +
Sbjct: 288 GWNPGGEKEIFSCEELIELFDENRLSKSPAA-FDQKKLDWMDNEYIKNADFAKVFELTKP 346
Query: 374 ---ESTKNHDLLPIFNAS 388
+ + +
Sbjct: 347 FLVAANRFDERAKELVKL 364
>gi|291294729|ref|YP_003506127.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
gi|290469688|gb|ADD27107.1| arginyl-tRNA synthetase [Meiothermus ruber DSM 1279]
Length = 613
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+ R + + D L R+LR+ + V N IDD
Sbjct: 128 HVGHLRNICLGDSLARILRFVGRDVEV---MNY--IDD 160
>gi|322517312|ref|ZP_08070187.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
gi|322124009|gb|EFX95562.1| methionine--tRNA ligase [Streptococcus vestibularis ATCC 49124]
Length = 667
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 25/177 (14%), Positives = 43/177 (24%), Gaps = 21/177 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIG+A I DVL R R + V Y +T +D+ KI ++A + +
Sbjct: 19 HIGSAYTTIACDVLARYKRMMNYD--VFY---LTGLDEHGQKIQQKAEEAGITPQEYVDG 73
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN-------------HIPQMIYLIQNIILHG 143
+ K+ Q + + ++ +
Sbjct: 74 MAVGVKDLWQLLDISYDKFIRTTDDYHEKVVAQVFERLLEQGDIYLGEYSGWYSVSDEEF 133
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
E+ D G E K +K
Sbjct: 134 FTESQLAEVYRDEQGNVIGGVAPSGHEVELVSEESYFFKLSNYADHLTDFFKEHPEF 190
>gi|282859895|ref|ZP_06268983.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
gi|282587298|gb|EFB92515.1| methionine--tRNA ligase [Prevotella bivia JCVIHMP010]
Length = 687
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 25/189 (13%), Positives = 51/189 (26%), Gaps = 27/189 (14%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RA++E +
Sbjct: 23 HIGHLAGVYVPSDIYVRYLRLK--KQEVVFIGGSDEHGVPIT-------IRAKKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEAN 149
+ + R T+ H + + G E
Sbjct: 72 ----PQDVCDRYHSMIKDSFKDFGIS-FDVYSRTTSDVHNKLASDFFKKLYEEGKLVEKE 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-FILWKRSTPMEPGWESPW 208
+E ++D + +K +D L ++ P
Sbjct: 127 SEQLYDEEAKQFLADRYVMGECPHCGNPNAYGDQCEKCGSDLSPLELKNPRSTISGSQPV 186
Query: 209 GRGRPGWHI 217
+ W++
Sbjct: 187 LKNTKNWYL 195
>gi|171779006|ref|ZP_02920014.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282364|gb|EDT47789.1| hypothetical protein STRINF_00889 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 485
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 48/389 (12%), Positives = 107/389 (27%), Gaps = 49/389 (12%)
Query: 23 PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD--- 74
P IR+ Y PT HIGNAR L+ L R++ G+ +V I TD
Sbjct: 2 PKKIRVRYAPSPT--GLLHIGNARTA-----LFNYLYARHHGGD----FVIRIEDTDRKR 50
Query: 75 -IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
++D ER++ E+ + + + + + +
Sbjct: 51 HVED--GERSQLENL-KWLGMDWDESPQTHEKYRQSERLDIYQKYIDQLLAEGKAYKSYV 107
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
+ A + + I E++ +P N +
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEEEKAAYIAEREAKGIIPTVRLAVNESGIYK 167
Query: 194 WKRSTPMEPG---------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
W + W G P ++ + + +L ++ + G +
Sbjct: 168 WHDIVKGDIEFEGGNVGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTP 225
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
+ A E + L + K + + +E + + +
Sbjct: 226 KQL---MVYEALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMP 277
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK-------GIIDPAVLSALYN 357
+ + + + + + E L + + + + +
Sbjct: 278 EAVFNFIALLGWNPGGEDEIFSREELIKLFDEHRLSKSPAAFDQKKMDWMSNEYIKNADF 337
Query: 358 DLNTVSAIQALHKLARESTKNHDLLPIFN 386
D A L + R + K L+ ++
Sbjct: 338 DTVFAMAKPFLEEAGRLTDKAEKLVELYK 366
>gi|170703076|ref|ZP_02893899.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
gi|170132017|gb|EDT00522.1| methionyl-tRNA synthetase [Burkholderia ambifaria IOP40-10]
Length = 720
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 21/150 (14%), Positives = 44/150 (29%), Gaps = 18/150 (12%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG--HAYEANNEI 152
+ + + +D ++ + I + A A +
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSENIYLALKENGLIAERAIEQA 140
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ F + + + + +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDN 170
>gi|163791192|ref|ZP_02185609.1| glutamyl-tRNA synthetase [Carnobacterium sp. AT7]
gi|159873523|gb|EDP67610.1| glutamyl-tRNA synthetase [Carnobacterium sp. AT7]
Length = 489
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 41/354 (11%), Positives = 85/354 (24%), Gaps = 43/354 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R+ G+ + I+D ++R E
Sbjct: 13 PT--GHLHIGNARTA-----LFNYLFARHNGGDFIIR-------IEDTDLKR-NIEGGET 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + D + ++ + Q ++ + +
Sbjct: 58 SQLENLKWL------GMNWDESPDNPGKFGPYRQSERREIYDPLVEQLLLSNRAYKCYCS 111
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES---- 206
E + + E+ K+ + + E +
Sbjct: 112 EDELEEEREAQRARGEMPHYGGKCAHLTAKEQKEKEASGIEPVIRFRVVKESTYRFEDIV 171
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP---------HHENEIAQSCCADR 257
I + G +D F H +
Sbjct: 172 KGSISFEAESIGGDFVIIKRDGMPTYNFAVAVDDHFMEITHVLRGDDHIANTPKQLMIYE 231
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ L + K + I + +E + + + + + +
Sbjct: 232 AFGWEAPQFGHMTLIINSETGKKLSKRDGNILQFIEQYREL--GYLPEAMFNFISLLGWS 289
Query: 318 EPID---FTVQRLTEAEILLS--KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQ 366
+ F E K P +K + DL TV+A+
Sbjct: 290 PVGEEEIFDHDTFVEMFDAERLSKSPAAFDAKKLEWINNQYMKKADLETVTALA 343
>gi|89889849|ref|ZP_01201360.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
gi|89518122|gb|EAS20778.1| methionine--tRNA ligase, metS [Flavobacteria bacterium BBFL7]
Length = 690
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 16/111 (14%), Positives = 31/111 (27%), Gaps = 29/111 (26%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKII 80
Y GP HIG+ + D+ R R + V ++ IT
Sbjct: 15 YTNGP-----VHIGHLAGVYVPADIFARYQRMRGSD--VAFICGSDEHGVPIT------- 60
Query: 81 ERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+A++E + + + + H R ++
Sbjct: 61 IKAKKEGIT------PQELVDRYHRIIGDSFKEFGI-TFDHYGRTSSTEHH 104
>gi|242036539|ref|XP_002465664.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
gi|241919518|gb|EER92662.1| hypothetical protein SORBIDRAFT_01g043330 [Sorghum bicolor]
Length = 597
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 55/354 (15%), Positives = 97/354 (27%), Gaps = 70/354 (19%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A I D + R R EK V + IT D +KI A E
Sbjct: 70 VNAPPHMGSAYTTIAADAIARFQRLQ--EKNVIF---ITGTDEHGEKI--AASAEASGRN 122
Query: 92 INDAISIITSKN-TQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ I+S T D + T ++ + ++ YE
Sbjct: 123 PKEHCDAISSSYKTLWADLDIEYDKFIRTTDSKHEAVVNEFYSRVLNSGDIYRADYEGLY 182
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHK------KNPADFILWKRSTPMEPGW 204
+ + + K E + ++ + +L + + P +
Sbjct: 183 CVSCEEYKDEKELLENNCCPVHLKPCVERKEDNYFFALSKYQHKLEELLTRNPDFVRPSY 242
Query: 205 ESPWGRGRPGWHIECSAMSSH--------------------------------------- 225
+G + ++S
Sbjct: 243 RLNEVQGWIKSGLRDFSISRASVEWGIPVPNDTKQTIYVWFDALLGYISALLDDGEQASL 302
Query: 226 ----YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKS 281
G +H G D++ H A A +GFL +G KM KS
Sbjct: 303 QQAVDHGWPASLHLIGKDILRFHAVYWPAMLMSAGLTVPDT--VFGHGFLTKDGMKMGKS 360
Query: 282 NGNFITINELLETKKFGGRSWPAPVIRLAMLMT-HYREPIDFTVQRLTEAEILL 334
GN + +L+E + A +R L + D++ +R
Sbjct: 361 LGNTLEPKDLVER-------FGADAVRYFFLREVEFGNDGDYSEERFINIVNAH 407
>gi|167753846|ref|ZP_02425973.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
gi|167658471|gb|EDS02601.1| hypothetical protein ALIPUT_02131 [Alistipes putredinis DSM 17216]
Length = 680
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 26/161 (16%), Positives = 41/161 (25%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ I D+ R LR + V V IT +AR+E
Sbjct: 19 GPVHIGHLAGVYIPSDIYTRYLRLKGYD--VISVCGSDEHGVPIT-------IKARKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ I + Q L R + H + + G
Sbjct: 70 T------PQQIVDRYHQLIKSSFEGLGMS-FDIYSRTSSKTHAATASEFFRKLYDEGKFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + + R +K
Sbjct: 123 ERTSEQYYDEETQTFLADRYIVGTCPRCGNDRAYGDQCEKC 163
>gi|163787073|ref|ZP_02181520.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
[Flavobacteriales bacterium ALC-1]
gi|159876961|gb|EDP71018.1| methionine--tRNA ligase (methionyl-tRNA synthetase)
[Flavobacteriales bacterium ALC-1]
Length = 682
Score = 37.8 bits (86), Expect = 4.2, Method: Composition-based stats.
Identities = 43/402 (10%), Positives = 105/402 (26%), Gaps = 57/402 (14%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------IT------- 73
Y GP HIG+ + D+ R LR + V ++ IT
Sbjct: 13 YTNGP-----IHIGHLAGVYVPSDIYARYLRLTGND--VAFICGSDEHGVPITIKAKKEG 65
Query: 74 ----DIDDK---IIERARQEHPSIPIN------DAISIITSKNTQQFVKDTTRLACLAPT 120
DI DK II+++ ++ N + + + +
Sbjct: 66 VTPQDIVDKYHAIIKKSFEDFGITFDNYSRTSAKIHHDTAQEFFKTLYNKNEFIEEVTEQ 125
Query: 121 HQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQK------ 174
N +++ G+ ++ +S + +
Sbjct: 126 LYDAEANQFLADRFIVGTCPKCGYEESYGDQCENCGTSHNATDLINPKSAITGNVPTLKE 185
Query: 175 -MGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDI 233
+P H+ ++IL +P + G +
Sbjct: 186 TKHWFLPLNKHEDFLREWILKGHKKDWKPNVYGQVKSWVDDGLRPRAVTRDLGWGIPVPV 245
Query: 234 HGGGLDLIFPHHEN-----EIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
GG +++ + + A + + W + + I
Sbjct: 246 EGGEGKVLYVWFDAPIGYISATKEWAAREGKNWEDYWKDEKTKLVHFIGKDNIVFHCIIF 305
Query: 289 NELLETK-------KFGGRSWPAPVIRLAMLMTHYREPI-DFTVQRLTEAEILLSKWPQT 340
+L+ + + + ++ + D+ + + ++L
Sbjct: 306 PSMLKAEGSYILPDNVPANEFLNLEGKKLSTSKNWAVWLPDYLIDFPNQQDVLRYALTAN 365
Query: 341 STSKGIIDPAVLSALYNDLNTVSAI--QALHKLARESTKNHD 380
+ D + N + AI ++++ + K +D
Sbjct: 366 APESKDNDFTWKDFQARNNNELVAIFGNFINRVVVLTNKYYD 407
>gi|325688905|gb|EGD30913.1| glutamate--tRNA ligase [Streptococcus sanguinis SK115]
Length = 485
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 46/371 (12%), Positives = 95/371 (25%), Gaps = 34/371 (9%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R+Y G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH-----KKNPADFILWKRSTPMEPGWE 205
+ F +E+ E + D ++K ++ E
Sbjct: 118 RQEAAGETPRYINEFLGMSEEEKAAYIAEREAAGIIPTVRLAVNDAGVYKWIDMVKGEIE 177
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVF---DIHGGGLDLIFPHHENEIAQSCCADRIEKTA 262
G W I+ Y V + + H +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNFAVVIDDHLMEISHVIRGDDHIANTPKQLMVYEALGWE 237
Query: 263 NIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDF 322
+ L + K + + +E + + + + + + + +
Sbjct: 238 APEFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLGWNPGGEH 295
Query: 323 TVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--LHKLARES 375
+ E L K P K + D +T+ A+ L + R +
Sbjct: 296 EIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPYLEEAGRLT 355
Query: 376 TKNHDLLPIFN 386
K L+ ++
Sbjct: 356 DKAEKLVELYK 366
>gi|172061392|ref|YP_001809044.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
gi|226710896|sp|B1YUT2|SYM_BURA4 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|171993909|gb|ACB64828.1| methionyl-tRNA synthetase [Burkholderia ambifaria MC40-6]
Length = 720
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPR---------ATNHIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERAIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPY 187
>gi|17549657|ref|NP_522997.1| methionyl-tRNA synthetase [Ralstonia solanacearum GMI1000]
gi|17431911|emb|CAD18589.1| probable trna synthetase protein [Ralstonia solanacearum GMI1000]
Length = 496
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEK 64
PT H+G+ P + D+ RLLR +
Sbjct: 11 PTPNGDLHLGHLSGPFLAADICRRLLRQAGEDT 43
>gi|224055851|ref|XP_002298685.1| predicted protein [Populus trichocarpa]
gi|222845943|gb|EEE83490.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 19/147 (12%), Positives = 39/147 (26%), Gaps = 21/147 (14%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 26 PYVNNVPHLGNIIGCVLSADVFARYCRLRGYNA--IYICG-TD----------EYGTATE 72
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI--QNIILHGH 144
++ N I K + ++ ++ I + + +
Sbjct: 73 TKAMEENSTPKQICDKYYAIHREVYKWFNISFDEFGRTSSPQQTEICQAIFKKLLENNWL 132
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKID 171
+ + ++ DT
Sbjct: 133 SENSMQQLYCDTCERFLADRLVEGNCP 159
>gi|46579659|ref|YP_010467.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
gi|81566897|sp|Q72CN5|SYR_DESVH RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|46449074|gb|AAS95726.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. Hildenborough]
gi|311233457|gb|ADP86311.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris RCH1]
Length = 551
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+ R V D L R++R+ + Y N
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYIN 163
>gi|49475743|ref|YP_033784.1| arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
gi|81647809|sp|Q6G316|SYR_BARHE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|49238550|emb|CAF27790.1| Arginyl-tRNA synthetase [Bartonella henselae str. Houston-1]
Length = 585
Score = 37.8 bits (86), Expect = 4.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R +V DVL LL++ NIT
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLSNLLQFVGY--------NIT 163
>gi|323498216|ref|ZP_08103218.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
gi|323316644|gb|EGA69653.1| methionyl-tRNA synthetase [Vibrio sinaloensis DSM 21326]
Length = 686
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 45/425 (10%), Positives = 107/425 (25%), Gaps = 45/425 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V ++ DD I+ +A+Q +
Sbjct: 19 GSIHLGHMLEHIQADIWVRYQRLRGN--TVNFIC----ADDAHGTPIMLKAQQMGITPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ I+ ++ ++ + F H + + ++ + +G
Sbjct: 72 -EMIAAVSEEHQKDF---AGFDISFDNYHSTHSEENRELASHIYLELKKNGFISSRTISQ 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME-PGWESPWGRG 211
+FD + + + + P +P +
Sbjct: 128 LFDPEKEMFLPDRFVKGTCPKCKSEDQYGDNCDNCGETYSPTELIDPKSAVSGATPVMKD 187
Query: 212 RPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTANI 264
+ + S + + + + E+ + Q E
Sbjct: 188 SEHFFFDLPQFESMLQEWTRSGSLQAETANKMQEWFESGLQQWDISRDAPYFGFEIPGEK 247
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
S N + L+ ++ + + Y + +
Sbjct: 248 DKFFYVWLDAPIGYMGSFKNLCDKRDDLDFDEYWNKDSSTELYHFIGKDIVYFHSLFW-- 305
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
E + P G + + + A L L E + + +
Sbjct: 306 --PAMLEGSGFRKPDNVFVHGYVTVNGAKMSKSKGTFIKAATYLDHLDPECLRYYYAAKL 363
Query: 385 FNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS--------- 427
+ + L +E + +N ++ I L + +R F+
Sbjct: 364 NSRIDDLDLNLEDFTQRVNADVVNKIVNLASRNAGFITKRFEGKLSANFAEPELYNEFAA 423
Query: 428 -ADYI 431
AD I
Sbjct: 424 AADRI 428
>gi|302671208|ref|YP_003831168.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
gi|302395681|gb|ADL34586.1| arginyl-tRNA synthetase ArgS [Butyrivibrio proteoclasticus B316]
Length = 589
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 25/181 (13%), Positives = 47/181 (25%), Gaps = 21/181 (11%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIP 91
GP V H+G+ R ++ + + R+L+Y K+I A +
Sbjct: 122 GPNVAKSLHVGHLRSAVIGESIKRILKYTGN---------------KVIGDAHLGDWGLQ 166
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
+ I+ + + D
Sbjct: 167 MGLVITELEVRKPDLCYFDPNYEGPYPKEAPFTVEELGEIYPAASAKSKEDEAFKAKA-- 224
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPE--KYHKKNPADFILWKRSTPMEPGWESPWG 209
D + G R + M + + K +K +F LWK + +P
Sbjct: 225 --MDATKKLQDGYKPYRALWHHIMNVSLADLKKNYKNLNVNFDLWKGESDADPVIPGMVE 282
Query: 210 R 210
Sbjct: 283 Y 283
>gi|220909041|ref|YP_002484352.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
gi|254782957|sp|B8HSK8|SYR_CYAP4 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|219865652|gb|ACL45991.1| arginyl-tRNA synthetase [Cyanothece sp. PCC 7425]
Length = 585
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D L R+L + E + +V
Sbjct: 132 MHVGHLRSTIIGDCLARILEFLGHEVLRLNHV 163
>gi|226947300|ref|YP_002802391.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
gi|226841497|gb|ACO84163.1| methionine--tRNA ligase [Clostridium botulinum A2 str. Kyoto]
Length = 645
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 102/415 (24%), Gaps = 83/415 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KI--IERARQEHPSIPIND 94
HIGN + D L R R + V +T D+ KI + A++ P +++
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVTPKAYVDE 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
++ I + + H + + F
Sbjct: 75 IVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYCTPCESF 134
Query: 155 DTSSIPNYGSFSRRK----------------------IDEQKMGTRVPEKYHKKNPADFI 192
T + G I+ + + +KN
Sbjct: 135 WTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQPESRKNEMLNN 194
Query: 193 LWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHYLGK 229
K + + G P G++ E + Y
Sbjct: 195 FLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNTEKDELYKKYW-- 252
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H G D++ H D +G+L ++G KMSKS GN +
Sbjct: 253 PADVHLVGKDILRFHTIYWPIMLMALD--IPLPKQVFGHGWLLVDGGKMSKSKGNVVDPV 310
Query: 290 ELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
L+ + + + + + + + E
Sbjct: 311 VLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTVAMIEKYFD 370
Query: 336 KWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
K ID P + L A++ + + K D
Sbjct: 371 GEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANKYID 425
>gi|150864552|ref|XP_001383414.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
gi|149385808|gb|ABN65385.2| leucine--tRNA ligase [Scheffersomyces stipitis CBS 6054]
Length = 863
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 19/123 (15%), Positives = 39/123 (31%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+ R R V + D A E+ ++
Sbjct: 10 HLGHTRVYTISDVIARFKRLKGY--NVIHPMG---WD------AFGLPAENAAVERGVNP 58
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEII 153
+ T +N + + + + T + + + +G AY +I
Sbjct: 59 ADWTERNIDKMKEQIDFMLADFDWDREVTTCSPDYYKWTQKIFLLLFENGLAYRKEAQIN 118
Query: 154 FDT 156
+D
Sbjct: 119 WDP 121
>gi|120602858|ref|YP_967258.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
gi|166232782|sp|A1VEG5|SYR_DESVV RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|120563087|gb|ABM28831.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris DP4]
Length = 551
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+ R V D L R++R+ + Y N
Sbjct: 127 PT--GPLHIGHGRGAAVGDSLARIMRFAGYDVSTEYYIN 163
>gi|33326393|gb|AAQ08614.1| Leusyl-tRNA synthetase [Agrobacterium vitis]
Length = 878
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R + DV+ R R
Sbjct: 47 GRIHIGHVRNYAMGDVVARYKRARGYN 73
>gi|315122845|ref|YP_004063334.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
gi|313496247|gb|ADR52846.1| arginyl-tRNA synthetase [Candidatus Liberibacter solanacearum
CLso-ZC1]
Length = 586
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 11/31 (35%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R +V DVL L+ + E
Sbjct: 132 PT--GPMHVGHCRCAVVGDVLANLMEFSGYE 160
>gi|313115100|ref|ZP_07800588.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
KLE1255]
gi|310622577|gb|EFQ06044.1| methionyl-tRNA synthetase [Faecalibacterium cf. prausnitzii
KLE1255]
Length = 665
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 40/314 (12%), Positives = 72/314 (22%), Gaps = 56/314 (17%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS---- 89
D HIG++ + D L R R + V +T D+ KI ++A +
Sbjct: 18 DKLHIGHSYTTVACDALARFKRMQGYD-----VMFLTGTDEHGQKIQDKAADAGVTPKEY 72
Query: 90 -----------------------IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR-- 124
+D K + + H +
Sbjct: 73 VDKIVATVKDLWKLLDVSYDRFIRTTDDYHMESCQKIFTKLYEQGDIYKGEYIGHYCKPC 132
Query: 125 ----------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRR 168
+ +A + ++ + S
Sbjct: 133 ESFWTDSQLVDGKCPDCGREVYDAHEEAYFFKTSKYA-DRLLKLYEENPQFIQPESRKNE 191
Query: 169 KIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLG 228
I K G + + W +
Sbjct: 192 MIAFIKQGLQDTCVSRTSVKWGIPVPFDPKHTMYVWVDALSNYISALGYGNEKYHDYDKF 251
Query: 229 KVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
D+H G +++ H A D +G+L + G KMSKS GN +
Sbjct: 252 WPADLHMVGKEILRFHTILWPAMLMALD--LPLPKRVFGHGWLLMNGGKMSKSVGNVVDP 309
Query: 289 NELLETKKFGGRSW 302
L + +
Sbjct: 310 VILCDRYGVDAIRY 323
>gi|322435660|ref|YP_004217872.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
gi|321163387|gb|ADW69092.1| Arginine--tRNA ligase [Acidobacterium sp. MP5ACTX9]
Length = 674
Score = 37.8 bits (86), Expect = 4.4, Method: Composition-based stats.
Identities = 15/39 (38%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYG--EKCVTYVRNITD 74
AHIG+ R I+ D RLLR V V+N D
Sbjct: 128 AAHIGHLRNAILGDTFQRLLRKDEYKTGYDV-GVQNYID 165
>gi|331008205|gb|EGH88262.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 499
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGADSDASQCENCAQAPDAELM 168
>gi|325957848|ref|YP_004289314.1| arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
gi|325329280|gb|ADZ08342.1| Arginyl-tRNA synthetase [Methanobacterium sp. AL-21]
Length = 561
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R I+ D L R+L+ E Y N
Sbjct: 129 HIGHIRNSIIGDSLARVLKSAGYEVETQYYVN 160
>gi|261252071|ref|ZP_05944644.1| chaperone protein HscA [Vibrio orientalis CIP 102891]
gi|260935462|gb|EEX91451.1| chaperone protein HscA [Vibrio orientalis CIP 102891]
Length = 616
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 26/173 (15%), Positives = 54/173 (31%), Gaps = 15/173 (8%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + PA A + Y+ D + +
Sbjct: 430 TAMSVHIVQGEREMVDDCRSLARFSLKGIPAMAAGAAHIRVTYQVDADGLLSVTAMEKST 489
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL-HKLARESTKNHDLLPIFNASAHIL 392
+ + ++ + D T + L LA + + ++ A+
Sbjct: 490 GIQSEIQVKPSYGLSDDEVANMLRDSMTYAKDDMLARALAEQRVEADRVIEGLIAAMQAD 549
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
G E+ E + + AIE L++ R AD I +G +D
Sbjct: 550 GDELLSESERQELIKAIEALIELR-----NGD--DADAI-----EQGI--KDT 588
>gi|125718928|ref|YP_001036061.1| glutamyl-tRNA synthetase [Streptococcus sanguinis SK36]
gi|166226859|sp|A3CQQ6|SYE_STRSV RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|125498845|gb|ABN45511.1| Glutamyl-tRNA synthetase, putative [Streptococcus sanguinis SK36]
Length = 485
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 49/379 (12%), Positives = 103/379 (27%), Gaps = 50/379 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFV----KDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
E+ + + + +++ + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLDMYQKYVNELLDKGLAYKSYVTEEELAAERER 118
Query: 141 LHGHAYEANN-EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTP 199
S + R+ R+ + K
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNE-TGVYKWTDIVKGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-- 367
+ + + E L K P K + D +T+ A+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPY 347
Query: 368 LHKLARESTKNHDLLPIFN 386
L + R + K L+ ++
Sbjct: 348 LEEAGRLTDKAEKLVELYK 366
>gi|115352535|ref|YP_774374.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
gi|122322486|sp|Q0BCT3|SYM_BURCM RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|115282523|gb|ABI88040.1| methionyl-tRNA synthetase [Burkholderia ambifaria AMMD]
Length = 720
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 42/167 (25%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R LR + E V Y+ DD ++ RA +E +
Sbjct: 33 IHIGHLVEYIQTDIWVRTLRMHGHE--VYYI----GADDTHGTPVMLRAEKEGLT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPR---------ATNHIPQMIYLIQNIILHGHA 145
+ + + +D + ++ + A
Sbjct: 82 -PKQLIDRVWTEHKRDFDSFGVSFDNFYSTDSDENRVLSESIYLALKENGLIAERAIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDNCEVCGSTYLPTELLNPY 187
>gi|71000619|ref|XP_754991.1| cytoskeleton assembly control protein Sla2 [Aspergillus fumigatus
Af293]
gi|66852628|gb|EAL92953.1| cytoskeleton assembly control protein Sla2, putative [Aspergillus
fumigatus Af293]
Length = 1043
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 18/122 (14%), Positives = 46/122 (37%), Gaps = 4/122 (3%)
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
RE ++ Q + +L + + + + + + I+AL +
Sbjct: 377 RENLNARAQYERDQLMLQQYDRRVKDLEEQMAQLTTNLNMQNASKDEQIRALQEQVNTWR 436
Query: 377 KNHDLLPIFNASAHILGIEVCKEHLNKNISIA-IEKLVQERLIL---LKMKKFSSADYIR 432
++ L + +++ + + + A ++ +++R L LK K AD IR
Sbjct: 437 SKYEALAKLYSQLRQEHLDLLQTTKSLKLKAASAQEAIEKREKLERELKTKNLELADMIR 496
Query: 433 KQ 434
++
Sbjct: 497 ER 498
>gi|293372431|ref|ZP_06618815.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
gi|292632614|gb|EFF51208.1| methionine--tRNA ligase [Bacteroides ovatus SD CMC 3f]
Length = 679
Score = 37.4 bits (85), Expect = 4.5, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + + R T H + + G
Sbjct: 70 T------PQDVVDRYHSLIKESFKEFGIS-FDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|294675168|ref|YP_003575784.1| methionine--tRNA ligase [Prevotella ruminicola 23]
gi|294472184|gb|ADE81573.1| methionine--tRNA ligase [Prevotella ruminicola 23]
Length = 688
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 23/163 (14%), Positives = 41/163 (25%), Gaps = 26/163 (15%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHPSIP 91
HIG+ + D+ R LR ++ V ++ IT RAR+E +
Sbjct: 23 HIGHLAGVYVPADIYVRYLRLK--KREVLFIGGSDEHGVPIT-------VRARKEGIT-- 71
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEAN 149
+ + + R T H + + G E
Sbjct: 72 ----PQDVVDRYHKMIKDSFEEFGIS-FDIYSRTTSETHHKFAAEWFKKLYDEGKLTEET 126
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
E ++D + +K D
Sbjct: 127 TEQLYDEEAKQFLADRYVTGECPHCHNEGAYGDQCEKCGRDLS 169
>gi|323465759|gb|ADX69446.1| Methionyl-tRNA synthetase [Lactobacillus helveticus H10]
Length = 658
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|311896747|dbj|BAJ29155.1| putative arginyl-tRNA synthetase [Kitasatospora setae KM-6054]
Length = 587
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 20/38 (52%), Gaps = 8/38 (21%)
Query: 34 TVYDFA--------HIGNARPMIVFDVLYRLLRYYYGE 63
TV D++ H+G+ R ++ D L R+L + GE
Sbjct: 117 TVIDYSAPNIAKEMHVGHLRTTVIGDSLVRVLSFLGGE 154
>gi|312136309|ref|YP_004003646.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
gi|311224028|gb|ADP76884.1| arginyl-tRNA synthetase [Methanothermus fervidus DSM 2088]
Length = 558
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R++R + Y N
Sbjct: 126 HVGHLRNAIIGDSLARIMRAAGYDVETHYYVN 157
>gi|218132714|ref|ZP_03461518.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
43243]
gi|217992440|gb|EEC58443.1| hypothetical protein BACPEC_00575 [Bacteroides pectinophilus ATCC
43243]
Length = 676
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 51/416 (12%), Positives = 98/416 (23%), Gaps = 81/416 (19%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + S
Sbjct: 46 PHIGNTYEIVLADSIARYKRQQGYD--VFFQ---TGTDEHGQKIELKAEEAGISPQEFVD 100
Query: 96 --------ISII-----------TSKNTQQFVKDTTRLACLAPTHQP----RATNHIPQM 132
I + T K ++ V+ + +
Sbjct: 101 NVSGEIKRIWDLMDTSYNKFIRTTDKYHEKQVQKIFKKLYDQGDIYKGFYEGMYCTPCES 160
Query: 133 IYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD-- 190
+ ++ + K+ E + +
Sbjct: 161 FFTASQLVDGKCPDCGRPCQPAREEAYFLKLGKYTNKLIEHIESHPEFIQPESRKNEMMN 220
Query: 191 --------------------FILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
+ + W G + S K
Sbjct: 221 NFIKAGLQDLCVSRTSFKWGIPVDFDDKHVVYVWLDALTNYITGLGYDVDGNSDENFNKY 280
Query: 231 FD--IHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITI 288
+ +H G D++ H + +L KMSKS GN I
Sbjct: 281 WPADLHLIGKDILRFHTIYWPIMLMALG--LPLPKQIFGHPWLLQGDGKMSKSKGNVIYA 338
Query: 289 NELLETKKFGGRSW---------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQ 339
++L++ + VI +++ + T+ L I +S
Sbjct: 339 DDLVDMFGVDAVRYFVLHEMPFENDGVITWELMVERMNSDLANTLGNLVNRTIAMSNKYF 398
Query: 340 TSTSKG-----IIDPA----------VLSALYNDLNTVSAIQALHKLARESTKNHD 380
D ++ + L AI + L + K D
Sbjct: 399 GGDVNDTSATTDFDEDLKRVVTGTKALIDKDMDKLRVADAITEIFTLFKRCNKYID 454
>gi|118594693|ref|ZP_01552040.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
gi|118440471|gb|EAV47098.1| methionyl-tRNA synthetase [Methylophilales bacterium HTCC2181]
Length = 553
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 19/161 (11%), Positives = 42/161 (26%), Gaps = 17/161 (10%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R E + Y+ DD I+ RA +E S
Sbjct: 15 GSIHLGHLVEYIQTDIWVRYQRLVGNE--IHYIC----ADDTHGTPIMLRAEKEGIS--- 65
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNE 151
+ ++ D + + + L ++++ + E
Sbjct: 66 ---PEQLVENVHKEHSADFSDFNISFDNFYSTNSIENKNLSEALYKSLVGNNKIEAKEIE 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+D + + + +
Sbjct: 123 QFYDDKKNMFLPDRFIKGTCPKCKANDQYGDSCESCGTTYS 163
>gi|116333117|ref|YP_794644.1| methyonyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
gi|116098464|gb|ABJ63613.1| methionyl-tRNA synthetase [Lactobacillus brevis ATCC 367]
Length = 677
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 27/180 (15%), Positives = 61/180 (33%), Gaps = 11/180 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQEHPSIPIND 94
HIGN+ I D + R R + V ++ TD I+DK +A+ + P ++
Sbjct: 21 HIGNSYTTIACDTVARYKRSNGYD--VFFLTG-TDEHGLKIEDK--AKAQNQTPQEYVDG 75
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEANNEII 153
+ I + + + H +++ + + Y ++E
Sbjct: 76 MATGIKQLWKTLEISNDKFIRTTDHEHVAAVQAIFDRLLKQGDIYLGEYEGWYSEDDEEY 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F + + + K+ + + K+ F + K + + + S +P
Sbjct: 136 FTETQLAKVYRDADGKMIGGQAPSGHDVSLVKEQSYFFKMSKYADWLLDFYHSHPHFIQP 195
>gi|20094195|ref|NP_614042.1| arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
gi|23822192|sp|Q8TXB6|SYR_METKA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|19887217|gb|AAM01972.1| Arginyl-tRNA synthetase [Methanopyrus kandleri AV19]
Length = 592
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 16/32 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R ++ D+L R + + V Y N
Sbjct: 146 HIGHGRNAVIGDILARCMVFTNYGVEVQYYVN 177
>gi|116749515|ref|YP_846202.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
gi|166231649|sp|A0LK15|SYL_SYNFM RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|116698579|gb|ABK17767.1| leucyl-tRNA synthetase [Syntrophobacter fumaroxidans MPOB]
Length = 829
Score = 37.4 bits (85), Expect = 4.6, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 12/27 (44%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DV+ R LR
Sbjct: 46 GRIHMGHVRNYSIGDVVARFLRMRGYN 72
>gi|315612009|ref|ZP_07886926.1| glutamate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
gi|315315811|gb|EFU63846.1| glutamate--tRNA ligase [Streptococcus sanguinis ATCC 49296]
Length = 486
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 100/358 (27%), Gaps = 42/358 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + + H
Sbjct: 60 LENL-RWLGIDWDESPETHANYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAEREH 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
+ + L + K + + +E + + + + + +
Sbjct: 234 LGWDAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLTTIFEMAK 345
>gi|257462510|ref|ZP_05626922.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
gi|317060166|ref|ZP_07924651.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
gi|313685842|gb|EFS22677.1| leucyl-tRNA synthetase [Fusobacterium sp. D12]
Length = 852
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + DV+ R R
Sbjct: 49 HVGHARNYTIGDVIARYKRMKGYN 72
>gi|253579415|ref|ZP_04856685.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39B_FAA]
gi|251849513|gb|EES77473.1| conserved hypothetical protein [Ruminococcus sp. 5_1_39BFAA]
Length = 652
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 19/130 (14%), Positives = 43/130 (33%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 19 PHIGNTYEVVLADAIARYKRQQGYD--VFFQ---TGTDEHGQKIELKAEEAGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ + + + +H Q+ + + + G Y+ + E ++
Sbjct: 68 PKEFVDNVSGEIKRIWDLMNTSYDKFIRTTDEDHEKQVKKIFKKMYAKGDIYKGHYEGMY 127
Query: 155 DTSSIPNYGS 164
T +
Sbjct: 128 CTPCESFFTE 137
>gi|148378083|ref|YP_001252624.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|153931420|ref|YP_001382482.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|153936823|ref|YP_001386034.1| methionyl-tRNA synthetase [Clostridium botulinum A str. Hall]
gi|148287567|emb|CAL81631.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 3502]
gi|152927464|gb|ABS32964.1| methionyl-tRNA synthetase [Clostridium botulinum A str. ATCC 19397]
gi|152932737|gb|ABS38236.1| methionine--tRNA ligase [Clostridium botulinum A str. Hall]
Length = 645
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 55/422 (13%), Positives = 94/422 (22%), Gaps = 97/422 (22%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE--------------------KCVT---YV------- 69
HIGN + D L R R + K VT YV
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYDVMFLTGTDEHGQKIQRLAEAKKVTPKVYVDEIVAGI 79
Query: 70 ------RNITDID-DKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ 122
NI D DK I ++ + K +
Sbjct: 80 KELWKMMNI---DYDKFIR---------TTDEYHVELVQKIFKTLYDKGDIYKSEYSGWY 127
Query: 123 PR------------------ATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGS 164
+ + + +A + I I
Sbjct: 128 CTPCESFWTETQLEDGKCPDCGRSVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQPESR 187
Query: 165 FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP--GWHIECSAM 222
+ + K G + + + W G+ E +
Sbjct: 188 KNEMLNNFLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYSTEKDEL 247
Query: 223 SSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSN 282
Y D+H G D++ H D +G+L ++G KMSKS
Sbjct: 248 YKKYW--PADVHLVGKDILRFHTIYWPIMLMALD--IPLPKQVFGHGWLLVDGGKMSKSK 303
Query: 283 GNFITINELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLT 328
GN + L+ + + + + + + +
Sbjct: 304 GNVVDPVVLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTVA 363
Query: 329 EAEILLSKWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKN 378
E K ID P + L A++ + + K
Sbjct: 364 MIEKYFDGEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANKY 423
Query: 379 HD 380
D
Sbjct: 424 ID 425
>gi|197302731|ref|ZP_03167785.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
29176]
gi|197298313|gb|EDY32859.1| hypothetical protein RUMLAC_01461 [Ruminococcus lactaris ATCC
29176]
Length = 677
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 20/130 (15%), Positives = 44/130 (33%), Gaps = 15/130 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 65 PHIGNTYEIVLADAIARYKRSQGYD--VFFQ---TGTDEHGQKIELKAEEAGIT------ 113
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIF 154
K + + + + +H Q+ + + + G Y+ + E ++
Sbjct: 114 PKEFVDKVSGEIKRIWDLMDTSYDKFIRTTDEDHEKQVKKIFKKLYDKGDIYKGHYEGMY 173
Query: 155 DTSSIPNYGS 164
T +
Sbjct: 174 CTPCESFFTE 183
>gi|323350587|ref|ZP_08086249.1| glutamate--tRNA ligase [Streptococcus sanguinis VMC66]
gi|322123269|gb|EFX94954.1| glutamate--tRNA ligase [Streptococcus sanguinis VMC66]
gi|324992544|gb|EGC24465.1| glutamate--tRNA ligase [Streptococcus sanguinis SK405]
gi|327459956|gb|EGF06295.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1]
gi|327472490|gb|EGF17921.1| glutamate--tRNA ligase [Streptococcus sanguinis SK408]
gi|327488851|gb|EGF20650.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1058]
Length = 485
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 104/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + + + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N A W E
Sbjct: 119 QEAAGETPRYINEFLGMSEEEKAAYIAEREAAGIIPTVRLVVNEAGIYKWTDMVKGEIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + +L ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--L 368
+ + + E L K P K + D +T+ A+ L
Sbjct: 289 WNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPYL 348
Query: 369 HKLARESTKNHDLLPIFN 386
+ R + K L+ ++
Sbjct: 349 EEAGRLTDKAEKLVELYK 366
>gi|257466670|ref|ZP_05630981.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|315917824|ref|ZP_07914064.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
gi|313691699|gb|EFS28534.1| leucyl-tRNA synthetase [Fusobacterium gonidiaformans ATCC 25563]
Length = 854
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + DV+ R R
Sbjct: 51 HVGHARNYTIGDVIARYKRMKGYN 74
>gi|255011397|ref|ZP_05283523.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313149211|ref|ZP_07811404.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
gi|313137978|gb|EFR55338.1| methionyl-tRNA synthetase [Bacteroides fragilis 3_1_12]
Length = 679
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KENVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R + H + + G
Sbjct: 70 T------PQDVVDRYHFLIKKSFEEFGIS-FDVYSRTSSKTHHELASDFFKTLYEKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|224419223|ref|ZP_03657229.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|253826941|ref|ZP_04869826.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|313142726|ref|ZP_07804919.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|253510347|gb|EES89006.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
gi|313131757|gb|EFR49374.1| arginyl-tRNA synthetase [Helicobacter canadensis MIT 98-5491]
Length = 521
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR I+ D L R+ R+ Y N
Sbjct: 108 PT--GPLHIGHARGAILGDSLCRIGRHLGYSITTEYYIN 144
>gi|170755122|ref|YP_001779702.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
gi|169120334|gb|ACA44170.1| methionyl-tRNA synthetase [Clostridium botulinum B1 str. Okra]
Length = 645
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 102/415 (24%), Gaps = 83/415 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KI--IERARQEHPSIPIND 94
HIGN + D L R R + V +T D+ KI + A++ P +++
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVTPKAYVDE 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
++ I + + H + + F
Sbjct: 75 IVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYCTPCESF 134
Query: 155 DTSSIPNYGSFSRRK----------------------IDEQKMGTRVPEKYHKKNPADFI 192
T + G I+ + + +KN
Sbjct: 135 WTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQPESRKNEMLNN 194
Query: 193 LWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHYLGK 229
K + + G P G++ E + Y
Sbjct: 195 FLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYNTEKDELYKKYW-- 252
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H G D++ H D +G+L ++G KMSKS GN +
Sbjct: 253 PADVHLVGKDILRFHTIYWPIMLMALD--IPLPKQVFGHGWLLVDGGKMSKSKGNVVDPV 310
Query: 290 ELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
L+ + + + + + + + E
Sbjct: 311 VLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTVAMIEKYFD 370
Query: 336 KWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
K ID P + L A++ + + K D
Sbjct: 371 GEIPAGNCKEDIDEELIKLALETPKKVEENMGKLRIPEALEEIWTFIGRANKYID 425
>gi|167580180|ref|ZP_02373054.1| methionyl-tRNA synthetase [Burkholderia thailandensis TXDOH]
Length = 709
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWARTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y + +
Sbjct: 141 YDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 187
>gi|85860177|ref|YP_462379.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
gi|109895044|sp|Q2LVV5|SYR_SYNAS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|85723268|gb|ABC78211.1| arginyl-tRNA synthetase [Syntrophus aciditrophicus SB]
Length = 562
Score = 37.4 bits (85), Expect = 4.7, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT HIG+AR +V DV+ +L E
Sbjct: 139 PT--GPLHIGHARGAVVGDVIANILGMSGYE 167
>gi|332360031|gb|EGJ37845.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1056]
Length = 485
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 104/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + + + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N A W E
Sbjct: 119 QEAAGETPRYINEFLGMSEEEKAAYIAEREAAGVIPTVRLAVNEAGVYKWTDMVKGEIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + +L ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--L 368
+ + + E L K P K + D +T+ A+ L
Sbjct: 289 WNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPYL 348
Query: 369 HKLARESTKNHDLLPIFN 386
+ R + K L+ ++
Sbjct: 349 EEAGRLTDKAEKLVELYK 366
>gi|327468462|gb|EGF13947.1| glutamate--tRNA ligase [Streptococcus sanguinis SK330]
Length = 485
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 51/378 (13%), Positives = 104/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + + + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N A W E
Sbjct: 119 QEAAGETPRYINEFLGMSEEEKAAYIAEREAAGIIPTVRLAVNEAGVYKWTDMVKGEIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + +L ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--L 368
+ + + E L K P K + D +T+ A+ L
Sbjct: 289 WNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPYL 348
Query: 369 HKLARESTKNHDLLPIFN 386
+ R + K L+ ++
Sbjct: 349 EEAGRLTDKAEKLVELYK 366
>gi|257452950|ref|ZP_05618249.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|317059491|ref|ZP_07923976.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
gi|313685167|gb|EFS22002.1| leucyl-tRNA synthetase [Fusobacterium sp. 3_1_5R]
Length = 854
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + DV+ R R
Sbjct: 51 HVGHARNYTIGDVIARYKRMKGYN 74
>gi|161506812|ref|YP_001576766.1| methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
gi|160347801|gb|ABX26475.1| Methionyl-tRNA synthetase [Lactobacillus helveticus DPC 4571]
Length = 658
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|260102231|ref|ZP_05752468.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
gi|260083972|gb|EEW68092.1| methionine-tRNA ligase [Lactobacillus helveticus DSM 20075]
gi|328463921|gb|EGF35439.1| methionyl-tRNA synthetase [Lactobacillus helveticus MTCC 5463]
Length = 658
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRSQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 EFVDKMAASYKKLWKSLDISYDKFIRTTDEEHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|218885953|ref|YP_002435274.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
gi|226701474|sp|B8DNX4|SYR_DESVM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|218756907|gb|ACL07806.1| arginyl-tRNA synthetase [Desulfovibrio vulgaris str. 'Miyazaki F']
Length = 551
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+ R + D L R+LR+ + Y N
Sbjct: 127 PT--GPLHIGHGRGAALGDCLARVLRFAGYDVTTEYYIN 163
>gi|78044545|ref|YP_359254.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
gi|123729620|sp|Q3AF30|SYL_CARHZ RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|77996660|gb|ABB15559.1| leucyl-tRNA synthetase [Carboxydothermus hydrogenoformans Z-2901]
Length = 821
Score = 37.4 bits (85), Expect = 4.8, Method: Composition-based stats.
Identities = 31/219 (14%), Positives = 55/219 (25%), Gaps = 28/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDA 95
H+G+ R + DV+ R R V + D A + N
Sbjct: 49 HMGHVRNYSIGDVVARYKRMRGY--AVLHPMG---WD------AFGLPAENAAIKHGNVH 97
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNEI 152
+ T N + L + AT H +L G AY+ +
Sbjct: 98 PADWTWDNIANMRRQLKELGISYDWRREIATCHPEYYRWTQWLFLQFYKKGLAYKKKAPV 157
Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI----LWKRSTPMEPGWESP 207
E+ ++ + L + + GW
Sbjct: 158 NWCPGCQTVLANEQVIDGECERCHSRVEKKELEQWFFKITAYAERLLQDIKKLT-GWPEK 216
Query: 208 WGRGRPGW--HIECSAMSSHYLG--KVFDIHGGGLDLIF 242
+ W E + ++ G + + D IF
Sbjct: 217 VKIMQENWIGRSEGAEITFKIKGHEETISVFTTRPDTIF 255
>gi|212550457|ref|YP_002308774.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
gi|212548695|dbj|BAG83363.1| methionyl-tRNA synthetase [Candidatus Azobacteroides
pseudotrichonymphae genomovar. CFP2]
Length = 557
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 22/157 (14%), Positives = 41/157 (26%), Gaps = 18/157 (11%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPI 92
HIG+ I D+ R LR E V ++ D+ I +AR+E +
Sbjct: 18 GPVHIGHLAGVYIPADIYARYLRLRGEE--VLFIGG---SDEHGVPIALKAREEGST--- 69
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANN 150
+ + K R ++ H +++ G E
Sbjct: 70 ---PQKVVDRYHHLIKKSFEDFGI-TFDIYSRTSSLIHHQTASEFFRHLYDKGKLVEKIT 125
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+DT + + +
Sbjct: 126 GQYYDTHAKLFLADRYISGTCYLCGYKQAYGDQCESC 162
>gi|148239596|ref|YP_001224983.1| leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
gi|189083176|sp|A5GL71|SYL_SYNPW RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|147848135|emb|CAK23686.1| Leucyl-tRNA synthetase [Synechococcus sp. WH 7803]
Length = 878
Score = 37.4 bits (85), Expect = 4.9, Method: Composition-based stats.
Identities = 25/123 (20%), Positives = 45/123 (36%), Gaps = 17/123 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R ++ DV+ R R V + D A E+ +I
Sbjct: 65 HMGHVRNYVITDVIARAQRMRG--DSVLHPMG---WD------AFGLPAENAAIERQVDP 113
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHI---PQMIYLIQNIILHGHAYEANNEII 153
+ T +N +Q RL + +AT H +L ++ G AY+ + +
Sbjct: 114 GVWTDRNIEQMKAQLARLGLSIDWSREQATCHADYYRWTQWLFLELMDQGLAYQKDATVN 173
Query: 154 FDT 156
+D
Sbjct: 174 WDP 176
>gi|319783184|ref|YP_004142660.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
gi|317169072|gb|ADV12610.1| arginyl-tRNA synthetase [Mesorhizobium ciceri biovar biserrulae
WSM1271]
Length = 585
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT H+G+ R +V D L L+ + + YV N
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVIN 169
>gi|296875694|ref|ZP_06899759.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
gi|296433264|gb|EFH19046.1| glutamate--tRNA ligase [Streptococcus parasanguinis ATCC 15912]
Length = 486
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 43/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLVVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D + + N+ + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKMDWMSNEYIKNADLATIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|255087254|ref|XP_002505550.1| predicted protein [Micromonas sp. RCC299]
gi|226520820|gb|ACO66808.1| predicted protein [Micromonas sp. RCC299]
Length = 886
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 15/110 (13%), Positives = 32/110 (29%), Gaps = 16/110 (14%)
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
Q L E K T + + + AI + + H L
Sbjct: 403 QGLRERYETHHKLRYTDEAIEAAAKFAHQYISDRFLPDKAIDLIDEAGSRVRLAHAAL-- 460
Query: 385 FNASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQ 434
K + ++ L++E+ ++ + F +A +R +
Sbjct: 461 --------------PEEAKELDKELKALLKEKDTAIRAQDFEAAGALRDK 496
>gi|327462704|gb|EGF09026.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1057]
Length = 485
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 43/378 (11%), Positives = 98/378 (25%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R++ G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-----------YHKKNPADFILWKRSTP 199
+ F +E+ E+ + K
Sbjct: 118 RQEAAGETPRYINEFLGMSEEEKAAYIAEREEAGVIPTVRLAVNEAGVYKWTDMVKGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR- 373
+ + + E L + + + D L + N+ + + + LA+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAA-FDQKKLDWMNNEYIKNADFERIFDLAKP 346
Query: 374 ---ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 347 YLEEAGRLTDKAEKLVEL 364
>gi|167618283|ref|ZP_02386914.1| methionyl-tRNA synthetase [Burkholderia thailandensis Bt4]
Length = 710
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 25 IHIGHLVEYIQTDIWARTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y + +
Sbjct: 133 YDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 179
>gi|119899492|ref|YP_934705.1| methionyl-tRNA synthetase [Azoarcus sp. BH72]
gi|187645705|sp|A1KAG3|SYM_AZOSB RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|119671905|emb|CAL95819.1| MetG protein [Azoarcus sp. BH72]
Length = 723
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 17/94 (18%), Positives = 30/94 (31%), Gaps = 16/94 (17%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R V YV DD I+ RA +E +
Sbjct: 16 GDIHLGHLVGYIQGDIWVRFQRMRGN--SVHYVC----ADDTHGTPIMLRAEKEGIT--- 66
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
+ + + ++D T + +
Sbjct: 67 ---PEQLIDRVHGEHLRDFTDFGVGFDHYHSTHS 97
>gi|88607061|ref|YP_505129.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
gi|88598124|gb|ABD43594.1| leucyl-tRNA synthetase [Anaplasma phagocytophilum HZ]
Length = 837
Score = 37.4 bits (85), Expect = 5.0, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ R R
Sbjct: 52 IHMGHIRNYVIGDVIARFKRAKGF 75
>gi|306834069|ref|ZP_07467189.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
gi|304423642|gb|EFM26788.1| methionine--tRNA ligase [Streptococcus bovis ATCC 700338]
Length = 667
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R E V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMNHE--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
++ K + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAADVKKLWEMLDISYDKFIRTTDDYHEKVVADVFEKLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + + + + +P
Sbjct: 136 FTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLVEFFHAYPDFIQP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|167947058|ref|ZP_02534132.1| Methionyl-tRNA synthetase, class Ia [Endoriftia persephone
'Hot96_1+Hot96_2']
Length = 367
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 20/152 (13%), Positives = 42/152 (27%), Gaps = 18/152 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
HIG+ I D+ R + + YV DD I+ RARQE
Sbjct: 3 GPIHIGHLVEYIQTDIWARFQKMRGHQCH--YVC----ADDAHGTPIMLRARQEGIE--- 53
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH--GHAYEANN 150
+ ++ +++ D + + ++ I A
Sbjct: 54 ---PEALIARVSEEHQADFAAFRIGFDNYHSTHSEENRELSKTIYERNRDAGHIAKRMIT 110
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+ ++ F + + + +
Sbjct: 111 QAYDPVETMFLPDRFIKGTCPKCGAEDQYGDN 142
>gi|187649792|sp|Q2T087|SYM_BURTA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
Length = 718
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 23/167 (13%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I D+ R +R + E Y+ DD ++ RA QE S
Sbjct: 33 IHIGHLVEYIQTDIWARTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVS----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKEAGFIAEREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ ++ I K Y + +
Sbjct: 141 YDPVKQMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 187
>gi|115377905|ref|ZP_01465090.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|115365065|gb|EAU64115.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 865
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R ++ DV R + +
Sbjct: 83 MHMGHVRNYLIGDVYARYFQMKGYD 107
>gi|319953400|ref|YP_004164667.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
gi|319422060|gb|ADV49169.1| methionyl-tRNA synthetase [Cellulophaga algicola DSM 14237]
Length = 689
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 23/164 (14%), Positives = 43/164 (26%), Gaps = 21/164 (12%)
Query: 29 YVCGPTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK---IIERAR 84
Y GP HIG+ + D+ R LR K V ++ D+ I +A+
Sbjct: 19 YTNGP-----IHIGHLAGVYVPADIYSRYLRLIG--KDVAFISG---SDEHGVAISMKAK 68
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHG 143
+E + + K K + + H + + G
Sbjct: 69 KEGIT------PKEVIDKYHAIIKKSFADFGITFDNYSRTSAEIHHETASEFFKTMYDQG 122
Query: 144 HAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E E ++D + + +
Sbjct: 123 DFIEETTEQLYDPEAKQFLADRFVVGTCPKCGYEEAYGDQCENC 166
>gi|255711786|ref|XP_002552176.1| KLTH0B08976p [Lachancea thermotolerans]
gi|238933554|emb|CAR21738.1| KLTH0B08976p [Lachancea thermotolerans]
Length = 751
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 36/348 (10%), Positives = 80/348 (22%), Gaps = 48/348 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITD-----IDDKIIERARQE 86
P V + H+GN ++ D+ R + +V TD +A +E
Sbjct: 205 PYVNNVPHLGNIVGSVLSADIYARYCKARNYNTL--FVCG-TDEYGTA----TETKAIEE 257
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGHA 145
+ + K + T ++ I + +G+
Sbjct: 258 GCT------PRELCDKYHKIHSDVYKWFQIGFDYFGRTTTEKQTEIAQDIFNKLNNNGYL 311
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWE 205
E + + ++ + K
Sbjct: 312 EEHSMKQLYCEEHKAYLADRYVEGECPKCHYEDARGDQCDKCGGLL-------------- 357
Query: 206 SPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIW 265
P+ P C +S + D IF + + W
Sbjct: 358 DPFELINP----RCKLDNSKPIP-------RNSDHIFISLDKLEPRIKEWVEKSSREGGW 406
Query: 266 IHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAM--LMTHYREPIDFT 323
N + + + +L+ + V+ + + + ++T
Sbjct: 407 SKNSR-TITQSWLKEGLQPRCITRDLVWGTPVPLEKYKDKVLYVWFDATIGYVSITANYT 465
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL 371
+ + K + + + L T LH L
Sbjct: 466 DGWKKWWKDPENVQLYQFMGKDNVPFHSVIFPGSQLGTNENWTMLHHL 513
>gi|159037752|ref|YP_001537005.1| methionine--tRNA ligase [Salinispora arenicola CNS-205]
gi|157916587|gb|ABV98014.1| Methionine--tRNA ligase [Salinispora arenicola CNS-205]
Length = 536
Score = 37.4 bits (85), Expect = 5.1, Method: Composition-based stats.
Identities = 12/37 (32%), Positives = 16/37 (43%), Gaps = 3/37 (8%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTY 68
PT H+G+ P + DV R LR + V Y
Sbjct: 16 PTPNGDLHLGHLAGPYLAADVYARHLRMSG--RPVVY 50
>gi|168213448|ref|ZP_02639073.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
gi|170715012|gb|EDT27194.1| methionyl-tRNA synthetase [Clostridium perfringens CPE str. F4969]
Length = 645
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|18311506|ref|NP_563440.1| methionyl-tRNA synthetase [Clostridium perfringens str. 13]
gi|25009370|sp|Q8XHG1|SYM_CLOPE RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|18146190|dbj|BAB82230.1| methionine-tRNA ligase [Clostridium perfringens str. 13]
Length = 645
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|302879580|ref|YP_003848144.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
gi|302582369|gb|ADL56380.1| methionyl-tRNA synthetase [Gallionella capsiferriformans ES-2]
Length = 695
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 21/153 (13%), Positives = 42/153 (27%), Gaps = 20/153 (13%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + E V YV DD I+ RA E +
Sbjct: 17 GSIHLGHLVEYIQTDIWVRFQKMQGHE--VHYVC----ADDTHGTPIMLRAESEGIT--- 67
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
+ ++ Q+ D H + ++ + L I
Sbjct: 68 ---PEALIARVWQEHYDDFAAFHVE-FDHYGSTNSAENKVCAESIYLALREKGLIEVRSI 123
Query: 153 ---IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
++ F + + + + +
Sbjct: 124 EQFYDPVKNMFLPDRFIKGECPKCHAKDQYGDN 156
>gi|240850752|ref|YP_002972152.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
gi|240267875|gb|ACS51463.1| arginyl-tRNA synthetase [Bartonella grahamii as4aup]
Length = 585
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R +V DVL LL++ NIT
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLSNLLQFTGY--------NIT 163
>gi|161936261|ref|YP_101774.2| methionyl-tRNA synthetase [Bacteroides fragilis YCH46]
gi|253566405|ref|ZP_04843858.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|265767265|ref|ZP_06094931.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|68565973|sp|Q64MP7|SYM_BACFR RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|251944577|gb|EES85052.1| methionyl-tRNA synthetase [Bacteroides sp. 3_2_5]
gi|263252570|gb|EEZ24082.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_16]
gi|301165294|emb|CBW24865.1| putative methionyl-tRNA synthetase [Bacteroides fragilis 638R]
Length = 679
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R + H + + G
Sbjct: 70 T------PQDVVDRYHFLIKKSFEEFGIS-FDVYSRTSSKTHHELASDFFKKLYEKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|60683709|ref|YP_213853.1| methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
gi|81313244|sp|Q5L7I8|SYM_BACFN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|60495143|emb|CAH09964.1| putative methionyl-tRNA synthetase [Bacteroides fragilis NCTC 9343]
Length = 679
Score = 37.4 bits (85), Expect = 5.2, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R + H + + G
Sbjct: 70 T------PQDVVDRYHFLIKKSFEEFGIS-FDVYSRTSSKTHHELASDFFKKLYEKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAHQFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|257454416|ref|ZP_05619678.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
gi|257448182|gb|EEV23163.1| leucyl-tRNA synthetase [Enhydrobacter aerosaccus SK60]
Length = 904
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 73 HMGHVRNYTISDVLSRYYRLKGYE 96
>gi|229173253|ref|ZP_04300800.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
gi|228610223|gb|EEK67498.1| Lysyl-tRNA synthetase [Bacillus cereus MM3]
Length = 519
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 62/415 (14%), Positives = 116/415 (27%), Gaps = 73/415 (17%)
Query: 30 VC--GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KI--- 79
VC G + HIGN R +I + R L+ + + DD KI
Sbjct: 22 VCASGISPSGSVHIGNFREIITTYFVVRALQDLGKKTRFIFS-----WDDYDRFRKIPKN 76
Query: 80 IERARQEHPSIPINDAIS------IITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
I+ + ++ +P D Q+F + A +
Sbjct: 77 IDPSFAKYIGMPYCDMPDPYGCHNSYAEHFEQEFEESLQVFGIEVEFIYQHAEYSSGRYN 136
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
I + + I +E++ V K +
Sbjct: 137 ENILEALYKRK----------EIYDILMSFKTGECSKEERESFYPVTLYCEKCGKDATTI 186
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHG-------------GGLDL 240
++ W G E S + ++ + + I GG D
Sbjct: 187 THFDEVLKTVWYE--CECECGKQNELSVLDTNIMKLNWKIDWPMRWMIEDVIFEPGGRDH 244
Query: 241 IFPHHENEIAQSCCADRIEKTANIWIHNGFLNL--EGRKMSKSNGNFITINELLETKKFG 298
+++ + + A ++ F+ + KMS S+GN IT +ELL
Sbjct: 245 SSETGSYNVSKKIAMEIFNREAPHYVSYDFIGIKGNHEKMSSSSGNSITPSELL------ 298
Query: 299 GRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYND 358
+ + VI YR F + + +++ + K + L
Sbjct: 299 -KVYLPEVILFMFAK--YRPNAAFHIGLDEDVIRNYTEYERL---KDSYENKTLKNED-- 350
Query: 359 LNTVSAIQALHKLARESTKNHDLLPI--FNASAHILGIEVCKEHLNKNISIAIEK 411
L + S + FN A L + + + I I++
Sbjct: 351 ---------LFDAIKLSKVDSGFKEYPKFNQVAGTLPLLNFDSSILQGILEKIDR 396
>gi|163868520|ref|YP_001609729.1| arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
gi|189083523|sp|A9IVK4|SYR_BART1 RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|161018176|emb|CAK01734.1| Arginyl-tRNA synthetase [Bartonella tribocorum CIP 105476]
Length = 585
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R +V DVL LL++ NIT
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLSNLLQFAGY--------NIT 163
>gi|20094800|ref|NP_614647.1| leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
gi|32171571|sp|Q8TVM4|SYL_METKA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|19888009|gb|AAM02577.1| Leucyl-tRNA synthetase [Methanopyrus kandleri AV19]
Length = 943
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 16/36 (44%), Gaps = 5/36 (13%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYYGE 63
TV Y + H+G+AR +V D+ R R
Sbjct: 31 ITVAYPYPSGSMHVGHARTYLVPDIYARFKRMQGYN 66
>gi|110639074|ref|YP_679283.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
gi|123163345|sp|Q11RM3|SYM_CYTH3 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|110281755|gb|ABG59941.1| methionyl-tRNA synthetase [Cytophaga hutchinsonii ATCC 33406]
Length = 689
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 27/201 (13%), Positives = 49/201 (24%), Gaps = 38/201 (18%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR + V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYARFLRSKG--ENVLFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAY 146
+ + K Q + L R ++ H + + G
Sbjct: 70 T------PQQVVDKYHVQIKQSFEELGIS-FDIYSRTSSKIHAETSSEYFKKLYEDGKFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN------------PADFILW 194
E +E +D + + +K +
Sbjct: 123 EQTSEQYYDPKAEQFLADRYIIGTCPKCGNENAYGDQCEKCGSTLSPSELINPRSTLSGE 182
Query: 195 KRSTPMEPGWESPWGRGRPGW 215
K W P + P
Sbjct: 183 KPVMKSTKHWFLPLDQYEPWL 203
>gi|323359386|ref|YP_004225782.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
gi|323275757|dbj|BAJ75902.1| methionyl-tRNA synthetase [Microbacterium testaceum StLB037]
Length = 524
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 8/62 (12%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
D HIG+ + D L R R + + +T D+ K++ A +
Sbjct: 18 DVPHIGHGYTTVAVDTLARWHRQAGDDTWM-----LTGTDEHGQKMMRAAAANGATPQEW 72
Query: 94 DA 95
Sbjct: 73 VD 74
>gi|310822829|ref|YP_003955187.1| leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
gi|309395901|gb|ADO73360.1| Leucyl-tRNA synthetase [Stigmatella aurantiaca DW4/3-1]
Length = 832
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 6/25 (24%), Positives = 12/25 (48%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R ++ DV R + +
Sbjct: 50 MHMGHVRNYLIGDVYARYFQMKGYD 74
>gi|116074843|ref|ZP_01472104.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. RS9916]
gi|116068065|gb|EAU73818.1| t-RNA synthetase, class Ia:Leucyl-tRNA synthetase [Synechococcus
sp. RS9916]
Length = 882
Score = 37.4 bits (85), Expect = 5.3, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 40 HIGNARPMIVFDVLYRLLRYYY 61
H+G+ R ++ DV+ R+ R
Sbjct: 63 HMGHVRNYVITDVIARVQRMRG 84
>gi|167957600|ref|ZP_02544674.1| methionyl-tRNA synthetase [candidate division TM7 single-cell
isolate TM7c]
Length = 493
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 22/116 (18%), Positives = 36/116 (31%), Gaps = 15/116 (12%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPINDAI 96
HIGNA ++ D+ R R K V + TD + KI +A+ E
Sbjct: 18 PHIGNALDYLLADIWARYHRQLG--KEVRFQAG-TD-EHGNKISAKAQAEGLDPIT---- 69
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ F + ++ +H I +Q I Y
Sbjct: 70 --YVNQTHLYFKEIMNKIGAQYTDFIRTTDSH---HIQAVQYIWKKLSPYIYKGTY 120
>gi|154493526|ref|ZP_02032846.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
43184]
gi|154086736|gb|EDN85781.1| hypothetical protein PARMER_02865 [Parabacteroides merdae ATCC
43184]
Length = 679
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 28/211 (13%), Positives = 58/211 (27%), Gaps = 35/211 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYV----------------RNIT--DIDD 77
HIG+ + D+ R LR E V + IT D+ D
Sbjct: 19 GPVHIGHLAGVYVPADIYARYLRLKGEE--VLMIGGSDEHGVPITLRAKKEGITPQDVVD 76
Query: 78 K---IIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQ-----PRATNHI 129
+ II+++ +E + I + + + + +
Sbjct: 77 RYHGIIKKSFEE-----FGISFDIYSRTTSATHRQVASDFFRTLYDKGEFIEKTSEQYYD 131
Query: 130 PQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPA 189
+ + + + G NE + S S + K + K+
Sbjct: 132 EEAKQFLADRYITGTCPHCGNEKAYGDQCEACGTSLSPTDLINPKSAISGSQPVMKETKH 191
Query: 190 DFILWKRSTPMEPGWESPWGRGR-PGWHIEC 219
++ + P W + P + +C
Sbjct: 192 WYLPLDKWEPFLRQWILEGHKEWKPNVYGQC 222
>gi|153005579|ref|YP_001379904.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
gi|152029152|gb|ABS26920.1| leucyl-tRNA synthetase [Anaeromyxobacter sp. Fw109-5]
Length = 838
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 9/27 (33%), Positives = 13/27 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+AR + D L R LR +
Sbjct: 48 GAMHMGHARVYTIGDALARHLRMRGHD 74
>gi|71735559|ref|YP_274611.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. phaseolicola
1448A]
gi|71556112|gb|AAZ35323.1| unnamed protein product [Pseudomonas syringae pv. phaseolicola
1448A]
Length = 499
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 GD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|89073403|ref|ZP_01159927.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
gi|89050890|gb|EAR56364.1| methionyl-tRNA synthetase [Photobacterium sp. SKA34]
Length = 681
Score = 37.4 bits (85), Expect = 5.4, Method: Composition-based stats.
Identities = 45/426 (10%), Positives = 103/426 (24%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ + D+ R R E V ++ DD I+ +A+Q
Sbjct: 19 GSIHLGHMLEHVQADIWVRYQRLRGNE--VHFIC----ADDAHGTPIMLKAQQMGMEPE- 71
Query: 93 NDAISIIT-SKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNE 151
I+ ++ T D H + + ++ + +
Sbjct: 72 -QMIAEVSKEHQTDFAGFDIDFSNY----HSTHSPENRELASFVYTQLKDNRFITSRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWGR 210
+FD + + + + +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPVMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + S K + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFESMLKEWTKSGALQEETSNKMQEWFESGLQQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+ S N + L +F + + Y + +
Sbjct: 247 TGKYFYVWLDAPIGYMGSFKNLCDKRDDLNFDEFWNKDSSTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
+ + P G + + + A L L E + +
Sbjct: 306 ---PAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKASTYLKHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKF---------- 425
+ + + L +E + +N ++ I L + +R F
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFDGKLSDNFVEPELYAEFV 422
Query: 426 SSADYI 431
++AD I
Sbjct: 423 AAADRI 428
>gi|219850962|ref|YP_002465394.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
gi|254782973|sp|B8GJL7|SYR_METPE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|219545221|gb|ACL15671.1| arginyl-tRNA synthetase [Methanosphaerula palustris E1-9c]
Length = 559
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R R V Y N
Sbjct: 123 HVGHIRNSILGDTLARAFRKAGYRVEVQYYVN 154
>gi|168205784|ref|ZP_02631789.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
gi|170662741|gb|EDT15424.1| methionyl-tRNA synthetase [Clostridium perfringens E str. JGS1987]
Length = 645
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|325697372|gb|EGD39258.1| glutamate--tRNA ligase [Streptococcus sanguinis SK160]
Length = 485
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 50/378 (13%), Positives = 103/378 (27%), Gaps = 48/378 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + + + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N W E
Sbjct: 119 QEAAGETPRYINEFLGMSEEEKAAYIAEREAAGIIPTVRLAVNEVGVYKWTDMVKGEIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + +L ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA--L 368
+ + + E L K P K + D +T+ A+ L
Sbjct: 289 WNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPYL 348
Query: 369 HKLARESTKNHDLLPIFN 386
+ R + K L+ ++
Sbjct: 349 EEAGRLTDKAEKLVELYK 366
>gi|322701499|gb|EFY93248.1| leucyl-tRNA synthetase [Metarhizium acridum CQMa 102]
Length = 962
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 18/132 (13%), Positives = 36/132 (27%), Gaps = 35/132 (26%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKII------------ERARQEH 87
H+G+ R + D + R R DD ++ A +
Sbjct: 100 HLGHLRVYSIADTVARYHRLKG--------------DDVLLPMGWDAFGLPAENAALERG 145
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGH 144
+ T +N ++ + + + L + G
Sbjct: 146 IDPGVW------TRRNIKKMKEQLGFMNGSWDWSRELTACDPEFYKHTQKLFLMLHERGL 199
Query: 145 AYEANNEIIFDT 156
AY+A E+ +D
Sbjct: 200 AYQAEAEVNYDP 211
>gi|255559589|ref|XP_002520814.1| hypothetical protein RCOM_0688330 [Ricinus communis]
gi|223539945|gb|EEF41523.1| hypothetical protein RCOM_0688330 [Ricinus communis]
Length = 335
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 5/49 (10%), Positives = 19/49 (38%)
Query: 394 IEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFIL 442
+ + + ++ +R + + AD ++K++ G+ +
Sbjct: 161 VSTADPRESSCVPREVQMAAVQRSKARAERNYEKADNLQKKITDAGYRV 209
>gi|71065144|ref|YP_263871.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
gi|123761787|sp|Q4FU71|SYL_PSYA2 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|71038129|gb|AAZ18437.1| leucyl-tRNA synthetase [Psychrobacter arcticus 273-4]
Length = 921
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 87 HMGHVRNYTISDVLSRYYRLKGYE 110
>gi|93005396|ref|YP_579833.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
gi|92393074|gb|ABE74349.1| leucyl-tRNA synthetase [Psychrobacter cryohalolentis K5]
Length = 934
Score = 37.4 bits (85), Expect = 5.5, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 105 HMGHVRNYTISDVLSRYYRLKGYE 128
>gi|312865656|ref|ZP_07725880.1| glutamate--tRNA ligase [Streptococcus downei F0415]
gi|311098777|gb|EFQ56997.1| glutamate--tRNA ligase [Streptococcus downei F0415]
Length = 484
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 47/377 (12%), Positives = 100/377 (26%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R+Y G T+V I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFVIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHEHYRQSERLELYQKYIDQLLEEGKAYKSYVTEEELATERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ VP N A W +
Sbjct: 119 QEAAGETPRYVNEYLGMSEEEKSAYITEREAAGIVPTVRLAVNEAGIYKWTDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGSNIGGDWVIQKRDGYPTYNF--AVVIDDHDMRISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEPP---QFGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D + + ND + + L +
Sbjct: 289 WNPGGEEEIFSRQELIKLFDETRLSKSPAA-FDQKKMDWVSNDYIKKADFDTIFALCKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
++ + D
Sbjct: 348 LEKAGRLTDKAEKLVEL 364
>gi|189083225|sp|Q1QDA4|SYL_PSYCK RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
Length = 919
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 90 HMGHVRNYTISDVLSRYYRLKGYE 113
>gi|322815163|gb|EFZ23882.1| methionyl-tRNA synthetase, putative [Trypanosoma cruzi]
Length = 765
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 23/140 (16%), Positives = 48/140 (34%), Gaps = 11/140 (7%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPI 92
V HIG+ ++ DV+ R + + V + + TD + K+ E ARQ+ +
Sbjct: 243 VNAAPHIGHVYSTLIADVIGRY--HTIKGERV-FAMSGTD-EHGQKVAEAARQKGMNPY- 297
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
D ++ + F + + + +H + L + G Y E
Sbjct: 298 -DFTFQVSREFIDCFEQMGYHM---DYFIRTTNESHKKVVHELWSKLEAKGDIYLGRYEG 353
Query: 153 IFDTSSIPNYGSFSRRKIDE 172
+ S + + +
Sbjct: 354 WYSVSDESFLTAQNVTDGVD 373
>gi|297471993|ref|XP_002685611.1| PREDICTED: ATP-binding cassette, sub-family A (ABC1), member 12 [Bos
taurus]
gi|296490339|gb|DAA32452.1| ATP-binding cassette, sub-family A (ABC1), member 12 [Bos taurus]
Length = 2593
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 18/157 (11%), Positives = 34/157 (21%), Gaps = 4/157 (2%)
Query: 71 NITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIP 130
N TD DDKI+ R + + I I ++F
Sbjct: 1703 NFTDRDDKILTRGERSVGFELLLKKIMAIL---IKRFHHTRRNWKGFIAQVILPIVFVTT 1759
Query: 131 QMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPAD 190
M + ++ TS + + +
Sbjct: 1760 AMGLGTLRSSSSSYPELEITPSLYGTSEQTTFYANYHPSTKDLVSAMWSFPGIDNMCLNI 1819
Query: 191 FILWKRSTPMEPGWESPWGRGRPGWHI-ECSAMSSHY 226
+ W+S + + CS +
Sbjct: 1820 SDPRCLNKNSLGKWDSSGEEPITNFGVCSCSENTQEC 1856
>gi|293607695|ref|ZP_06690026.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
gi|292813833|gb|EFF72983.1| methionine--tRNA ligase [Achromobacter piechaudii ATCC 43553]
Length = 702
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 17/158 (10%), Positives = 42/158 (26%), Gaps = 17/158 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ I D+ R +R V +V DD I+ +A +E +
Sbjct: 33 HIGHIMEYIQADIWVRSMRMAG--HTVHFV----GADDAHGAPIMLKAEKEGIT------ 80
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++ + + + ++ + + + + E +
Sbjct: 81 PQALVARYAAERPQYLNGFHIRFDHWHSTDSAENVALSHDIYRALREQNLIETRSIEQFY 140
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
D + + + A +
Sbjct: 141 DPVKGMFLADRYIKGECPKCHAKDQYGDSCEVCGAVYA 178
>gi|153938113|ref|YP_001389440.1| methionyl-tRNA synthetase [Clostridium botulinum F str. Langeland]
gi|152934009|gb|ABS39507.1| methionine--tRNA ligase [Clostridium botulinum F str. Langeland]
gi|295317546|gb|ADF97923.1| methionine--tRNA ligase [Clostridium botulinum F str. 230613]
Length = 645
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 44/176 (25%), Gaps = 19/176 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A + +
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + +G Y+ +
Sbjct: 69 KAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYENGDIYKSEYSGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP 207
S K + ++ Y K P + P
Sbjct: 129 TPCESFWTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQP 184
>gi|150399104|ref|YP_001322871.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
gi|166232807|sp|A6UP37|SYR_METVS RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|150011807|gb|ABR54259.1| arginyl-tRNA synthetase [Methanococcus vannielii SB]
Length = 569
Score = 37.4 bits (85), Expect = 5.6, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+ R M++ D L R+L Y N
Sbjct: 128 HIGHGRNMVIGDSLKRILNAAGYTVETQYYVN 159
>gi|302894129|ref|XP_003045945.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256726872|gb|EEU40232.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1197
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 25/126 (19%), Positives = 46/126 (36%), Gaps = 7/126 (5%)
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAREST 376
+ + + QR+ E E + + + D T I+ L LA
Sbjct: 667 KRQLRNSEQRVAELERQFMTEKDLKSLNKKLVEKRKTVSVLDTQTEIMIRQLEVLAGYVE 726
Query: 377 KNHDLLPIFN----ASAHILGIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIR 432
+ + + + I + + ++S AIE+L +ER LL+ K + AD R
Sbjct: 727 RAKETKTPVDPRDLEDSAIKEFVQKLDKVKMSMSAAIEQLHEERDELLEEKNQAIAD--R 784
Query: 433 KQ-LES 437
+ L
Sbjct: 785 DRALLE 790
>gi|168209762|ref|ZP_02635387.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|168217641|ref|ZP_02643266.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
gi|170712109|gb|EDT24291.1| methionyl-tRNA synthetase [Clostridium perfringens B str. ATCC
3626]
gi|182380303|gb|EDT77782.1| methionyl-tRNA synthetase [Clostridium perfringens NCTC 8239]
Length = 645
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|110803560|ref|YP_699780.1| methionyl-tRNA synthetase [Clostridium perfringens SM101]
gi|110684061|gb|ABG87431.1| methionine--tRNA ligase [Clostridium perfringens SM101]
Length = 645
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|13471188|ref|NP_102757.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
gi|23822203|sp|Q98LC0|SYR_RHILO RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|14021932|dbj|BAB48543.1| arginyl-tRNA synthetase [Mesorhizobium loti MAFF303099]
Length = 585
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 12/39 (30%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT H+G+ R +V D L L+ + + YV N
Sbjct: 133 PT--GPMHVGHCRGAVVGDALANLMAFAGYDVTKEYVIN 169
>gi|329850270|ref|ZP_08265115.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
gi|328840585|gb|EGF90156.1| arginyl-tRNA synthetase [Asticcacaulis biprosthecum C19]
Length = 608
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 12/36 (33%), Positives = 19/36 (52%), Gaps = 2/36 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
GP V HIG+ R ++ + L R++R+ VT
Sbjct: 129 GPNVAKEMHIGHLRTAVIGESLKRIMRFLG--DDVT 162
>gi|326575588|gb|EGE25512.1| leucyl-tRNA synthetase [Moraxella catarrhalis O35E]
Length = 878
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|326568083|gb|EGE18167.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC7]
Length = 878
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|326566006|gb|EGE16166.1| leucyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
Length = 878
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|303248045|ref|ZP_07334311.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
gi|302490602|gb|EFL50507.1| arginyl-tRNA synthetase [Desulfovibrio fructosovorans JJ]
Length = 552
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 44/353 (12%), Positives = 85/353 (24%), Gaps = 52/353 (14%)
Query: 12 ERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
R EF + +P+ GP HIG+ R V D L R+LR Y N
Sbjct: 116 TRIQVEFVSANPT-------GP-----LHIGHGRGAAVGDSLARVLRAAGFAVETEYYIN 163
Query: 72 ITDIDDK----------IIERARQ-------EHPSIPINDAISIITSK---NTQQFVKDT 111
D I+ R R+ E D + + + + + D
Sbjct: 164 -----DAGRQMRILGQSILYRCRELAGKDVTEPEDYYRGDYVKELARELLDREGEGLLDL 218
Query: 112 TRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKID 171
+ + ++ + + +++ + + + +
Sbjct: 219 PEDKATDICRLYGEKEILDGIKKDLREFRVGHDVWFPESKLFAAGAVARTFDDLRAKNLA 278
Query: 172 EQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVF 231
K G + + D +L K + + + + G
Sbjct: 279 YDKDGALWFATTNFGDDKDRVLVKSGGDLT--YFASDIAYHDDKFRRGFDVVVDIWG--- 333
Query: 232 DIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINEL 291
HH C + + + + L T
Sbjct: 334 ----------ADHHGYVPRMKACVAALGRDPETSLKVILVQLVNLLKGGEQIAMSTRAGK 383
Query: 292 LETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSK 344
ET A R L +DF + + E + +
Sbjct: 384 FETLADVVAEVGADAARFMFLSRKSDSHLDFDLDAVKEKSMDNPVYYVQYAHA 436
>gi|300813634|ref|ZP_07093962.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
F0141]
gi|300512270|gb|EFK39442.1| isoleucine--tRNA ligase [Peptoniphilus sp. oral taxon 836 str.
F0141]
Length = 1033
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 74/255 (29%), Gaps = 17/255 (6%)
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ S + ++ + H K P + R + W
Sbjct: 461 CKCGHVESIGSRKELKEKALEDIDENVELHRPYVDNIHLKCPKCGDIMTREKDVIDVWFD 520
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
WH + D G+D + +A S N+ +
Sbjct: 521 SGSMPFAQWHYPFENKDNFDELFPADFICEGIDQTRGWFYSLLAISTYMTGKSPYKNVLV 580
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-EPIDFTVQ 325
++ L+ EG+KMSKS GN + EL + + A V+R +L P F
Sbjct: 581 NDLILDKEGKKMSKSRGNTVAPFELFD-------KYGADVVRWYLLYVSPPWNPTKFDED 633
Query: 326 RLTEAEILLSK-------WPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST 376
L E E + + + IDP + D + ++L +
Sbjct: 634 GLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDRDEIDKWLLSKYNRLVKVVR 693
Query: 377 KNHDLLPIFNASAHI 391
+ D + I
Sbjct: 694 DDMDKFELTKVVREI 708
>gi|270291812|ref|ZP_06198028.1| glutamate--tRNA ligase [Streptococcus sp. M143]
gi|270279897|gb|EFA25738.1| glutamate--tRNA ligase [Streptococcus sp. M143]
Length = 486
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 99/358 (27%), Gaps = 42/358 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSQEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLATIFEMAK 345
>gi|269795721|ref|YP_003315176.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
gi|269097906|gb|ACZ22342.1| valyl-tRNA synthetase [Sanguibacter keddieii DSM 10542]
Length = 906
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 68 PTVSGSLHVGHVFSYTHTDVVARFQRMRG--KSVFYPMG---WDD 107
>gi|169343256|ref|ZP_02864267.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|182624314|ref|ZP_02952099.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
gi|169298554|gb|EDS80635.1| methionyl-tRNA synthetase [Clostridium perfringens C str. JGS1495]
gi|177910532|gb|EDT72905.1| methionyl-tRNA synthetase [Clostridium perfringens D str. JGS1721]
Length = 645
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|168177409|ref|ZP_02612073.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
gi|182670464|gb|EDT82438.1| methionyl-tRNA synthetase [Clostridium botulinum NCTC 2916]
Length = 645
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 19/176 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A + +
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + G Y+ +
Sbjct: 69 KAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP 207
S K + ++ Y K P + P
Sbjct: 129 TPCESFWTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQP 184
>gi|152967451|ref|YP_001363235.1| valyl-tRNA synthetase [Kineococcus radiotolerans SRS30216]
gi|151361968|gb|ABS04971.1| tRNA synthetase valyl/leucyl anticodon-binding [Kineococcus
radiotolerans SRS30216]
Length = 877
Score = 37.4 bits (85), Expect = 5.7, Method: Composition-based stats.
Identities = 14/45 (31%), Positives = 17/45 (37%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ DV+ R R K V Y DD
Sbjct: 66 PTVSGSLHVGHVFSYTHTDVVARFQRMRG--KSVFYPMG---WDD 105
>gi|326572553|gb|EGE22542.1| leucyl-tRNA synthetase [Moraxella catarrhalis CO72]
Length = 878
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|326568501|gb|EGE18573.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC1]
Length = 878
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|326565043|gb|EGE15243.1| leucyl-tRNA synthetase [Moraxella catarrhalis 103P14B1]
gi|326574150|gb|EGE24098.1| leucyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
Length = 878
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|326559370|gb|EGE09795.1| leucyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 878
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|307292797|ref|ZP_07572643.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
gi|306880863|gb|EFN12079.1| methionyl-tRNA synthetase [Sphingobium chlorophenolicum L-1]
Length = 520
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 22/134 (16%), Positives = 40/134 (29%), Gaps = 15/134 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A +I D + R R ++ V + T D+ K+ + AR
Sbjct: 16 GRPHIGHAYEVIATDAIARFQRMM--DRDVFFQ---TGTDEHGLKMAQTARNRGIE---- 66
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEI 152
+ + + F L + +H + Q + +G Y E
Sbjct: 67 --PRELADEMSSYFKAMNDGLNISYDRFIRTSEPDHHSASQAIWQAMEANGDLYLGRYEG 124
Query: 153 IFDTSSIPNYGSFS 166
+ Y
Sbjct: 125 WYSVRDEAFYDEKE 138
>gi|296113510|ref|YP_003627448.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921204|gb|ADG61555.1| leucyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|326572403|gb|EGE22395.1| leucyl-tRNA synthetase [Moraxella catarrhalis BC8]
Length = 878
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|284030234|ref|YP_003380165.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Kribbella
flavida DSM 17836]
gi|283809527|gb|ADB31366.1| tRNA synthetase valyl/leucyl anticodon-binding protein [Kribbella
flavida DSM 17836]
Length = 852
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+ D++ R R K V Y
Sbjct: 49 PTVSGSLHVGHIFSYTHTDLIARFQRMRG--KKVFY 82
>gi|113955156|ref|YP_730582.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
gi|123132569|sp|Q0IAE0|SYL_SYNS3 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|113882507|gb|ABI47465.1| leucyl-tRNA synthetase [Synechococcus sp. CC9311]
Length = 867
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 7/22 (31%), Positives = 13/22 (59%)
Query: 40 HIGNARPMIVFDVLYRLLRYYY 61
H+G+ R ++ DV+ R+ R
Sbjct: 64 HMGHVRNYVITDVIARVQRMRG 85
>gi|110801166|ref|YP_697211.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
gi|110675813|gb|ABG84800.1| methionyl-tRNA synthetase [Clostridium perfringens ATCC 13124]
Length = 645
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 18/150 (12%), Positives = 36/150 (24%), Gaps = 17/150 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D + R R E V +T D+ KI A ++ +
Sbjct: 20 HIGNTYTTVAADAIARFKRLTGHE-----VMFLTGTDEHGQKIERIANEKGIT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + H+ + + + + G Y+
Sbjct: 69 KEHVDEIVAGIKDLWKMMNISYDKFIRTTDDYHVKAVQEIFKKLYDQGDIYKDSYEGLYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S + ++
Sbjct: 129 TPCESFWTETQLVNGNCPDCGRPVEKAKEE 158
>gi|33239664|ref|NP_874606.1| arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
gi|39932096|sp|Q7VE03|SYR_PROMA RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|33237189|gb|AAP99258.1| Arginyl-tRNA synthetase [Prochlorococcus marinus subsp. marinus
str. CCMP1375]
Length = 603
Score = 37.4 bits (85), Expect = 5.8, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R+L Y + + +V
Sbjct: 149 MHVGHLRSTIIGDSIARILNYRGYKVIRLNHV 180
>gi|254881246|ref|ZP_05253956.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|294777663|ref|ZP_06743114.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
gi|254834039|gb|EET14348.1| methionyl-tRNA synthetase [Bacteroides sp. 4_3_47FAA]
gi|294448731|gb|EFG17280.1| methionine--tRNA ligase [Bacteroides vulgatus PC510]
Length = 680
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|228478388|ref|ZP_04062996.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
gi|228250067|gb|EEK09337.1| valyl-tRNA synthetase [Streptococcus salivarius SK126]
Length = 883
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 40/212 (18%), Positives = 72/212 (33%), Gaps = 21/212 (9%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S G D+IF I QS
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 496
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N+ IH + +GRKMSKS GN I +++E + A +R +
Sbjct: 497 EFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSN 549
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSA-------- 364
+ + F+ +++ + ++K S + + + + T A
Sbjct: 550 GSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLDAARENVTKVAAGQAGNVT 609
Query: 365 ----IQALHKLARESTKNHDLLPIFNASAHIL 392
+ L++ + T+N D F + HIL
Sbjct: 610 DRWILHNLNETIGKVTENFDKFE-FGVAGHIL 640
>gi|218295116|ref|ZP_03495952.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
gi|218244319|gb|EED10844.1| methionyl-tRNA synthetase [Thermus aquaticus Y51MC23]
Length = 619
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 9/28 (32%), Positives = 12/28 (42%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYG 62
V H+G+A +V D L R R
Sbjct: 14 VNAEPHLGHAYTTVVADFLARFHRLDGY 41
>gi|50554981|ref|XP_504899.1| YALI0F02299p [Yarrowia lipolytica]
gi|49650769|emb|CAG77701.1| YALI0F02299p [Yarrowia lipolytica]
Length = 818
Score = 37.0 bits (84), Expect = 5.8, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEK 64
H+G+ R + DVL R R +
Sbjct: 10 HMGHLRVYTISDVLARYRRMAGYDT 34
>gi|326559779|gb|EGE10189.1| leucyl-tRNA synthetase [Moraxella catarrhalis 7169]
Length = 878
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R + DVL R R E
Sbjct: 54 HMGHVRNYAITDVLSRYYRQKGYE 77
>gi|325179804|emb|CCA14207.1| kinesinlike protein putative [Albugo laibachii Nc14]
Length = 1462
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 26/186 (13%), Positives = 64/186 (34%), Gaps = 17/186 (9%)
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV 324
+ + + + +NELL+ W A L +T ++ +
Sbjct: 1241 HVRQEMIEQLAQANVSACNQQKALNELLDQCGKEKAEWKAKASALQTQVTSAQDELTAVK 1300
Query: 325 QRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPI 384
+ + + L + + S + + D L + + + +L ++T
Sbjct: 1301 HEVCQLQALKVEMNEASKAMDLADEKDKQLLEAQTKELHHVAEIERLEAKATTLTTKQEE 1360
Query: 385 FNASAHILGIEVCK--------EHLNKNISIAIEKLVQERLILLKMKK--FSSA---D-- 429
+ S L +E K + ++ +++ I+ L +ER + ++ F+ + D
Sbjct: 1361 LSQSVQSLSLERDKLRHQVRELKETDEELTLQIQVLTEERDTARQNEELLFTESIEKDQE 1420
Query: 430 --YIRK 433
IR
Sbjct: 1421 IERIRD 1426
>gi|153006229|ref|YP_001380554.1| hypothetical protein Anae109_3386 [Anaeromyxobacter sp. Fw109-5]
gi|152029802|gb|ABS27570.1| TPR repeat-containing protein [Anaeromyxobacter sp. Fw109-5]
Length = 1162
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 26/165 (15%), Positives = 55/165 (33%), Gaps = 20/165 (12%)
Query: 281 SNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQT 340
+ N + +L+ K R + + R+ + + +R E + KW +
Sbjct: 526 ALENAVFAWDLVAKKLDETEKRVPTDPRKRLPLAPARQKLLASCERYLEYQPKGEKWVEI 585
Query: 341 STSKGIIDPAVLSA-LYNDLNTVSAIQA-LHKLAR-ESTKNHDLLPIFNASAHILG---- 393
+ I + DL T A+ H+LA + D + ++ G
Sbjct: 586 AYKAANIHYRHNAFAEATDLFTRIALDHPSHELAGYSTNLVLDAYNLLGDWRNVNGWAKR 645
Query: 394 ------IEVCKEHLNKNISIAIE----KLVQERLILLKMKKFSSA 428
+ L +++ IE K+++ER + +A
Sbjct: 646 FYANAALVKAHPALKDDLARVIEQSAFKIIEEREKAR---DYEAA 687
>gi|94985140|ref|YP_604504.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
gi|94555421|gb|ABF45335.1| arginyl-tRNA synthetase [Deinococcus geothermalis DSM 11300]
Length = 628
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
H+G+ R +++ D L R+ R V +N IDD
Sbjct: 140 HVGHLRNVVLGDSLARIFRAAGHTVEV---QNY--IDD 172
>gi|290993512|ref|XP_002679377.1| predicted protein [Naegleria gruberi]
gi|284092993|gb|EFC46633.1| predicted protein [Naegleria gruberi]
Length = 524
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 17/124 (13%), Positives = 31/124 (25%), Gaps = 10/124 (8%)
Query: 309 LAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLN-TVSAIQA 367
L R + + + T+ I L + T A A
Sbjct: 143 LFCGEGFPRWAVQYKSPQPFPFPFESIHLRINQTTGAPIIQDCLKEPFFIYYLTQGASNA 202
Query: 368 LHKLARESTKNHD--------LLPIFNASAHILGIEVCKEHLNKNISIAIEKLVQERLIL 419
D F ++LG+E+ E +I + L+ +R
Sbjct: 203 FQNFYNNVNGLRDSFVNFWKVAANYFKDEENVLGLEIINEPWPGDIYEDLSLLLDQRGKA 262
Query: 420 -LKM 422
+
Sbjct: 263 DRQN 266
>gi|209522975|ref|ZP_03271532.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
gi|209496562|gb|EDZ96860.1| (p)ppGpp synthetase I, SpoT/RelA [Arthrospira maxima CS-328]
Length = 764
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 25/161 (15%), Positives = 51/161 (31%), Gaps = 14/161 (8%)
Query: 288 INELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEILLSKWPQTSTSKGII 347
I + T + + V L +T + + I+
Sbjct: 97 IEDTDVTPEELESHFGPEVRHLVEGVTKLSKFNFSNTTERQAENFRRMFLAMAQDIRVIV 156
Query: 348 DPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGIEVCKEHLNK---- 403
L+ +++ T+ + +++ + + IF A+ LGI K L
Sbjct: 157 --VKLADRLHNMRTLEFMSE----SKQRSIALETREIFAPLANRLGIGRLKWELEDLAFK 210
Query: 404 ----NISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGF 440
I+ V +R + K + AD +R ++E G
Sbjct: 211 YIEPEAYREIQIRVADRRATREEKLAALADILRDRMEKSGI 251
>gi|121602184|ref|YP_989046.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
gi|166232758|sp|A1USU3|SYR_BARBK RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|120614361|gb|ABM44962.1| arginyl-tRNA synthetase [Bartonella bacilliformis KC583]
Length = 585
Score = 37.0 bits (84), Expect = 5.9, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 19/41 (46%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R +V DVL LL++ N+T
Sbjct: 133 PT--GPMHVGHCRGAVVGDVLANLLQFAGY--------NVT 163
>gi|282882605|ref|ZP_06291224.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
gi|281297580|gb|EFA90057.1| isoleucine--tRNA ligase [Peptoniphilus lacrimalis 315-B]
Length = 1033
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 42/255 (16%), Positives = 74/255 (29%), Gaps = 17/255 (6%)
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ S + ++ + H K P + R + W
Sbjct: 461 CKCGHVESIGSRKELKEKALEDIDENVELHRPYVDNIHLKCPKCGDIMTREKDVIDVWFD 520
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
WH + D G+D + +A S N+ +
Sbjct: 521 SGSMPFAQWHYPFENKDNFDELFPADFICEGIDQTRGWFYSLLAISTYMTGKSPYKNVLV 580
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-EPIDFTVQ 325
++ L+ EG+KMSKS GN + EL + + A V+R +L P F
Sbjct: 581 NDLILDKEGKKMSKSRGNTVAPFELFD-------KYGADVVRWYLLYVSPPWNPTKFDED 633
Query: 326 RLTEAEILLSK-------WPQTSTSKGIIDP--AVLSALYNDLNTVSAIQALHKLAREST 376
L E E + + + IDP + D + ++L +
Sbjct: 634 GLREMESKFFRSLRNIYNFFSLYANTDDIDPRTFQVKYEDRDEIDKWLLSKYNRLVKVVR 693
Query: 377 KNHDLLPIFNASAHI 391
+ D + I
Sbjct: 694 DDMDKFELTKVVREI 708
>gi|254509344|ref|ZP_05121433.1| Fe-S protein assembly chaperone HscA [Vibrio parahaemolyticus 16]
gi|219547740|gb|EED24776.1| Fe-S protein assembly chaperone HscA [Vibrio parahaemolyticus 16]
Length = 617
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 24/182 (13%), Positives = 52/182 (28%), Gaps = 33/182 (18%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 431 TAMSVHIVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 490
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHIL- 392
+ + ++ + D T A+E + L + ++
Sbjct: 491 GVQSEIQVKPSYGLSDDEVANMLRDSMTH---------AKEDMQARALAEQRVEADRVIE 541
Query: 393 ---------GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILE 443
G E+ E + + AIE L++ R +AD I +G +
Sbjct: 542 GLIAAMQADGDELLSEQERQALLKAIEALIELR-----NGD--NADAI-----EQGI--K 587
Query: 444 DY 445
D
Sbjct: 588 DT 589
>gi|114570763|ref|YP_757443.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
gi|122315492|sp|Q0AMI8|SYR_MARMM RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|114341225|gb|ABI66505.1| arginyl-tRNA synthetase [Maricaulis maris MCS10]
Length = 588
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 11/30 (36%), Positives = 16/30 (53%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYY 61
GP V H+G+ R ++ D L RL R+
Sbjct: 123 GPNVAKPMHVGHLRSSVLGDSLQRLFRFRG 152
>gi|320537817|ref|ZP_08037738.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
gi|320145356|gb|EFW37051.1| methionyl-tRNA synthetase [Treponema phagedenis F0421]
Length = 774
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 22/196 (11%), Positives = 47/196 (23%), Gaps = 10/196 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V + H+GN ++ DV R R + Y+ TD E ++
Sbjct: 11 PYVNNIPHLGNLLQVLSADVFARFCRLKGYKTL--YICG-TD-----EYGTATETKALQE 62
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNE 151
+ +T + ++ +G E +
Sbjct: 63 GKTPQQLCDYYHAIHSDIYNWFNIAFDYFGRTSTPQQTEITQQIFLDLEKNGFITEHEMQ 122
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWGR 210
++ R ++ ++ +P +
Sbjct: 123 QLYCPQCRRFLADRYVRGTCPHCSYEDARGDQCEQCGKLLDPTELKNPQCATCGGTPEPQ 182
Query: 211 GRPGWHIECSAMSSHY 226
+I A+ S Y
Sbjct: 183 TTKHLYINLPAIISQY 198
>gi|289765479|ref|ZP_06524857.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
gi|289717034|gb|EFD81046.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 859
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 54/219 (24%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
I T N + + + + +L + + G Y+ +
Sbjct: 98 VIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 218 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 256
>gi|168182315|ref|ZP_02616979.1| methionine--tRNA ligase [Clostridium botulinum Bf]
gi|237793393|ref|YP_002860945.1| methionyl-tRNA synthetase [Clostridium botulinum Ba4 str. 657]
gi|182674668|gb|EDT86629.1| methionine--tRNA ligase [Clostridium botulinum Bf]
gi|229262065|gb|ACQ53098.1| methionine--tRNA ligase [Clostridium botulinum Ba4 str. 657]
Length = 645
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 23/176 (13%), Positives = 43/176 (24%), Gaps = 19/176 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A + +
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYE--ANNEII 153
+ + + H+ + + + + G Y+ +
Sbjct: 69 KAYVDEIVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYC 128
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEK--YHKKNPADFILWKRSTPMEPGWESP 207
S K + ++ Y K P + P
Sbjct: 129 TPCESFWTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQP 184
>gi|167569200|ref|ZP_02362074.1| methionyl-tRNA synthetase [Burkholderia oklahomensis C6786]
Length = 718
Score = 37.0 bits (84), Expect = 6.0, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I DV R +R + E Y+ DD ++ RA QE +
Sbjct: 33 IHIGHLVEYIQTDVWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVT----- 81
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 82 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAKREIEQA 140
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y + +
Sbjct: 141 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 187
>gi|289523254|ref|ZP_06440108.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
gi|289503797|gb|EFD24961.1| leucine--tRNA ligase [Anaerobaculum hydrogeniformans ATCC BAA-1850]
Length = 823
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 32/201 (15%), Positives = 54/201 (26%), Gaps = 28/201 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + D++ R L V + A E+ +I
Sbjct: 47 HMGHLRNYSIGDLMARFLTMRGY--NVLHPMGF---------DAFGLPAENAAIKYGVHP 95
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNEII 153
T N ++ + C + AT H + G AY A I
Sbjct: 96 FEWTWNNIERMTAQLKSMGCSYDWRRRIATCHPDYYRWNQWFFLKFYEEGLAYRAEAPIN 155
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPME--------PGWE 205
+ S + ++ E R + KK + L E PGW
Sbjct: 156 WCPSCKTV---LANEQVIEGGHCWRCGSEVTKKKLKQWFLSITKYAQELLDSLEDLPGWP 212
Query: 206 SPWGRGRPGWHIECSAMSSHY 226
+ W + +
Sbjct: 213 EKVKIMQRNWIGRSEGVKLKF 233
>gi|150003455|ref|YP_001298199.1| methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
gi|187646706|sp|A6KYR3|SYM_BACV8 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|149931879|gb|ABR38577.1| Methionyl-tRNA synthetase [Bacteroides vulgatus ATCC 8482]
Length = 680
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|49474356|ref|YP_032398.1| arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
gi|81646981|sp|Q6FZH0|SYR_BARQU RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|49239860|emb|CAF26254.1| Arginyl-tRNA synthetase [Bartonella quintana str. Toulouse]
Length = 585
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 10/41 (24%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNIT 73
PT H+G+ R + DVL LL++ NIT
Sbjct: 133 PT--GPMHVGHCRGAVFGDVLSNLLQFVGY--------NIT 163
>gi|58699049|ref|ZP_00373891.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
gi|58534443|gb|EAL58600.1| leucyl-tRNA synthetase [Wolbachia endosymbiont of Drosophila
ananassae]
Length = 236
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 24/150 (16%), Positives = 47/150 (31%), Gaps = 17/150 (11%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDA 95
H+G+ R + DV+ R R E V + I A E+ + N +
Sbjct: 42 IHMGHLRNYAIGDVIARYKRARGFE--VLH---------PIGWDAFGLPAENAARDNNIS 90
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN---HIPQMIYLIQNIILHGHAYEANNEI 152
I T +N + ++ +T + + + HG AY + +
Sbjct: 91 PEIWTKENIDNMRAQLKSIGLSYNWNRELSTCEPNYYTHEQKFFLDFLKHGLAYRKESWV 150
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEK 182
+D + + G V ++
Sbjct: 151 NWDPVDQTVLANEQVVDGKGWRSGAVVEKR 180
>gi|322804348|emb|CBZ01898.1| methionyl-tRNA synthetase [Clostridium botulinum H04402 065]
Length = 645
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 55/415 (13%), Positives = 102/415 (24%), Gaps = 83/415 (20%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KI--IERARQEHPSIPIND 94
HIGN + D L R R + V +T D+ KI + A++ P + +++
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKKVTPKVYVDE 74
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
++ I + + H + + F
Sbjct: 75 IVAGIKELWKMMNIDYDKFIRTTDEYHVELVQKIFKTLYDKGDIYKSEYSGWYCTPCESF 134
Query: 155 DTSSIPNYGSFSRRK----------------------IDEQKMGTRVPEKYHKKNPADFI 192
T + G I+ + + +KN
Sbjct: 135 WTETQLEDGKCPDCGRPVEKAKEEAYFFKMSKYAPKLIEYIESHPEFIQPESRKNEMLNN 194
Query: 193 LWKRSTPMEPGWESPWGRGRP-----------------------GWHIECSAMSSHYLGK 229
K + + G P G+ E + Y
Sbjct: 195 FLKPGLQDLCVSRTSFDWGIPVTFDEKHVIYVWIDALANYITALGYSTEKDELYKKYW-- 252
Query: 230 VFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITIN 289
D+H G D++ H D +G+L ++G KMSKS GN +
Sbjct: 253 PADVHLVGKDILRFHTIYWPIMLMALD--IPLPKQVFGHGWLLVDGGKMSKSKGNVVDPV 310
Query: 290 ELLETKKFGGRSW--------------PAPVIRLAMLMTHYREPIDFTVQRLTEAEILLS 335
L+ + + + + + + + E
Sbjct: 311 VLVNHFGTDPVRYYLLREIPFGADGIFNNEIFIKKINSDLANDLGNLLSRTVAMIEKYFD 370
Query: 336 KWPQTSTSKGIID----------PAVLSALYNDLNTVSAIQALHKLARESTKNHD 380
K ID P + L A++ + + K D
Sbjct: 371 GEIPAGNCKEDIDEELIKLALETPKKVEENMEKLRIPEALEEIWTFIGRANKYID 425
>gi|319640248|ref|ZP_07994973.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
gi|317388023|gb|EFV68877.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_40A]
Length = 680
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|237711556|ref|ZP_04542037.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
gi|229454251|gb|EEO59972.1| methionyl-tRNA synthetase [Bacteroides sp. 9_1_42FAA]
Length = 680
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKC 163
>gi|198274029|ref|ZP_03206561.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
gi|198273107|gb|EDY97376.1| hypothetical protein BACPLE_00166 [Bacteroides plebeius DSM 17135]
Length = 680
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYE 147
+ I + + ++ H + + E
Sbjct: 70 T------PQDIVDRYHTLIKDSFKEFGISFDVYGRTSSPTHHQLASDFFRKLYDKHEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + + +K
Sbjct: 124 KTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKC 163
>gi|260905420|ref|ZP_05913742.1| methionyl-tRNA synthetase [Brevibacterium linens BL2]
Length = 573
Score = 37.0 bits (84), Expect = 6.1, Method: Composition-based stats.
Identities = 24/135 (17%), Positives = 40/135 (29%), Gaps = 17/135 (12%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPIN 93
HIG+A I D + R R E V + T D+ K+++ A + S
Sbjct: 14 GAIHIGHAYEYIAADTIARFKRLDNHE--VFFA---TGTDEHGLKMLQAANKLGIS---- 64
Query: 94 DAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYEANNE 151
+ N + +DT R T +H + + + G Y
Sbjct: 65 --PKELADDNAKN-FRDTQLALGSTFDRFIRTTDEDHYEASKAIWRKLEEAGDIYLDTYA 121
Query: 152 IIFDTSSIPNYGSFS 166
+ Y
Sbjct: 122 GWYSVRDEAFYTQDE 136
>gi|322371471|ref|ZP_08046020.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
gi|320549003|gb|EFW90668.1| leucyl-tRNA synthetase [Haladaptatus paucihalophilus DX253]
Length = 948
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 10/23 (43%), Positives = 11/23 (47%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYY 61
HIG+AR V DV R R
Sbjct: 1 MHIGHARTYTVPDVWARYRRLQG 23
>gi|269125944|ref|YP_003299314.1| tRNA synthetase valyl/leucyl anticodon-binding protein
[Thermomonospora curvata DSM 43183]
gi|268310902|gb|ACY97276.1| tRNA synthetase valyl/leucyl anticodon-binding protein
[Thermomonospora curvata DSM 43183]
Length = 846
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 12/45 (26%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D + R R + V Y DD
Sbjct: 52 PTVSGSLHVGHVFSYTHTDTIARYQRMRG--RAVFYPMG---WDD 91
>gi|265752983|ref|ZP_06088552.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
gi|263236169|gb|EEZ21664.1| methionyl-tRNA synthetase [Bacteroides sp. 3_1_33FAA]
Length = 680
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKC 163
>gi|307710935|ref|ZP_07647360.1| glutamyl-tRNA synthetase [Streptococcus mitis SK321]
gi|307617236|gb|EFN96411.1| glutamyl-tRNA synthetase [Streptococcus mitis SK321]
Length = 486
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 45/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGEPPRYINEYLGMSEEEKAAYIAEREATGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|212695407|ref|ZP_03303535.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
gi|212662042|gb|EEB22616.1| hypothetical protein BACDOR_04956 [Bacteroides dorei DSM 17855]
Length = 680
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + E
Sbjct: 70 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKC 163
>gi|182685006|ref|YP_001836753.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
gi|238691139|sp|B2IMY9|SYE_STRPS RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|182630340|gb|ACB91288.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CGSP14]
Length = 486
Score = 37.0 bits (84), Expect = 6.2, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GVVHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|149190097|ref|ZP_01868374.1| chaperone protein HscA [Vibrio shilonii AK1]
gi|148836127|gb|EDL53087.1| chaperone protein HscA [Vibrio shilonii AK1]
Length = 616
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 24/173 (13%), Positives = 52/173 (30%), Gaps = 15/173 (8%)
Query: 274 EGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTVQRLTEAEIL 333
+ G +++ +F + P A + Y+ D + +
Sbjct: 430 TAMSVHIVQGEREMVDDCRSLARFSLKGIPPMAAGAAHIRVTYQVDADGLLSVTAMEKST 489
Query: 334 LSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQAL-HKLARESTKNHDLLPIFNASAHIL 392
+ + ++ + D T + L LA + + ++ A+
Sbjct: 490 GIQSDIQVKPSYGLSDDEVTNMLKDSMTYAKDDMLARALAEQRVEADRVIEGLIAAMQAD 549
Query: 393 GIEVCKEHLNKNISIAIEKLVQERLILLKMKKFSSADYIRKQLESKGFILEDY 445
G + E + + AIE L++ R AD I +G +D
Sbjct: 550 GDALLDEQEKQTLVEAIEALIKLR-----NGD--DADAI-----EQGI--KDT 588
>gi|84490352|ref|YP_448584.1| arginyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|109895002|sp|Q2NE12|SYR_METST RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|84373671|gb|ABC57941.1| ArgS [Methanosphaera stadtmanae DSM 3091]
Length = 560
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 10/32 (31%), Positives = 17/32 (53%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R+L++ + Y N
Sbjct: 129 HVGHLRNAILGDSLKRILQHAGYKVEAQYYVN 160
>gi|15642942|ref|NP_227983.1| leucyl-tRNA synthetase [Thermotoga maritima MSB8]
gi|6919980|sp|Q9WY15|SYL_THEMA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|4980663|gb|AAD35261.1|AE001702_1 leucyl-tRNA synthetase [Thermotoga maritima MSB8]
Length = 824
Score = 37.0 bits (84), Expect = 6.3, Method: Composition-based stats.
Identities = 22/194 (11%), Positives = 48/194 (24%), Gaps = 34/194 (17%)
Query: 14 KITEFQAIDPSNIRMY--VCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY--- 68
K + + Y V P H+G+ + ++ D++ R R V +
Sbjct: 20 KKVFYTPQRSEKPKYYALVMFPYPSGTLHVGHVKNYVIGDIVARYKRMRGY--NVLHPFG 77
Query: 69 -------VRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTH 121
N A ++ T KN + +L
Sbjct: 78 YDAFGLPAEN----------AAIEKGI------HPEEWTRKNIATIRQQVKKLGISYDWS 121
Query: 122 QPRATN---HIPQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSFSRRKIDEQKMGT 177
+ AT + ++ + +G AY+ + + E+ +
Sbjct: 122 REIATCDEEYYKWTQWIFLQLYKNGLAYKKKAAVNWCPKCKTVLANEQVKDGKCERCGTS 181
Query: 178 RVPEKYHKKNPADF 191
+
Sbjct: 182 VTIRHLEQWFFKIT 195
>gi|260641818|ref|ZP_05413598.2| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
gi|260624529|gb|EEX47400.1| methionine--tRNA ligase [Bacteroides finegoldii DSM 17565]
Length = 711
Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 21/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 51 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 101
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R + H + + G
Sbjct: 102 T------PQDVVDRYHSLIKKSFEEFGIS-FDVYSRTSSPTHHQLASDFFKTLYDKGEFI 154
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 155 EKTSEQYYDKEAKTFLADRYITGECPHCHSEGAYGDQCEKC 195
>gi|322372403|ref|ZP_08046939.1| valine--tRNA ligase [Streptococcus sp. C150]
gi|321277445|gb|EFX54514.1| valine--tRNA ligase [Streptococcus sp. C150]
Length = 883
Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 39/212 (18%), Positives = 70/212 (33%), Gaps = 21/212 (9%)
Query: 194 WKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSC 253
WK+ + W S G D+IF I QS
Sbjct: 437 WKQDEDVLDTWFSSALWPFSTMGWPDVEAEDFKRYFPTSTLVTGYDIIFFWVSRMIFQSL 496
Query: 254 CADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLM 313
+ N+ IH + +GRKMSKS GN I +++E + A +R +
Sbjct: 497 EFTGRQPFKNVLIHGLIRDEQGRKMSKSLGNGIDPMDVIE-------KYGADALRWFLSN 549
Query: 314 TH-YREPIDFTVQRLTEAEILLSKWPQTSTS------------KGIIDPAVLSALYNDLN 360
+ + F+ +++ + ++K S V + ++
Sbjct: 550 GSAPGQDVRFSYEKMDASWNFINKIWNISRYILMNNEGLTLDAARENVAKVAAGQAGNVT 609
Query: 361 TVSAIQALHKLARESTKNHDLLPIFNASAHIL 392
+ L++ + T+N D F + HIL
Sbjct: 610 DRWILHNLNETIGKVTENFDKFE-FGVAGHIL 640
>gi|257484098|ref|ZP_05638139.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. tabaci ATCC
11528]
Length = 105
Score = 37.0 bits (84), Expect = 6.4, Method: Composition-based stats.
Identities = 16/98 (16%), Positives = 31/98 (31%), Gaps = 17/98 (17%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDYQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRA 125
+ +N+ + +
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKPDNWMRPH 96
>gi|313127462|ref|YP_004037732.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
gi|312293827|gb|ADQ68287.1| leucyl-tRNA synthetase [Halogeometricum borinquense DSM 11551]
Length = 962
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYY 61
TV Y + HIG+AR V DV R R
Sbjct: 43 ITVPYPYPSGGMHIGHARTYTVPDVYARYRRQQG 76
>gi|91786826|ref|YP_547778.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
gi|123060257|sp|Q12F12|SYM_POLSJ RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|91696051|gb|ABE42880.1| methionyl-tRNA synthetase [Polaromonas sp. JS666]
Length = 689
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 24/205 (11%), Positives = 44/205 (21%), Gaps = 21/205 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ I D+ R R E V +V DD I+ A + + A
Sbjct: 20 HIGHIMEYIQADIWVRYQRMQGHE--VNFV----GADDAHGAPIMIAAEKAGKTPQQFVA 73
Query: 96 ISIITSK-NTQQFVKDTTRLACL--APTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
K F HQ ++ + ++ + +
Sbjct: 74 DIAAGRKPYLDGFHISFDNWHSTDGPENHQLAQQIYLDLKKAGLIETKTVEQFFDPDKNM 133
Query: 153 IFDTSSIPNYGSFS--------RRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
I ++ + + K S
Sbjct: 134 FLPDRFIKGQCPKCGAKDQYGDNCEVCGAVYAPTDLINPYSALSGATPVLKSSEHFFFRL 193
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGK 229
P + + + K
Sbjct: 194 SDPRCVAFLEQWTQDGMLQTEVANK 218
>gi|330870375|gb|EGH05084.1| methionyl-tRNA synthetase [Pseudomonas syringae pv. aesculi str.
0893_23]
Length = 283
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 25/171 (14%), Positives = 54/171 (31%), Gaps = 22/171 (12%)
Query: 33 PTVYDFAHIGN-ARPMIVFDVLYRLLRYYYGEKC-VTYVRNITDIDD---KIIERARQEH 87
PT HIG+ A P + DV R+ R + V+Y DD ++ + ++
Sbjct: 11 PTPNGDLHIGHIAGPFLAADVFTRVQRQRGHDCVLVSY------SDDFQSYMLRKGLEQG 64
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA-- 145
+ +N+ + + + R N+ + + A
Sbjct: 65 VD------PVELAGRNSDRIEASLAAINIKP-DNWMRPHNNPWFAEAVGEVFNALREAGS 117
Query: 146 --YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILW 194
+ ++E + Y +F+R + + + + D L
Sbjct: 118 IEFRDSSEPYCPDCDVWGYEAFARGNCNYCGAESDASQCENCAQAPDAELM 168
>gi|332285416|ref|YP_004417327.1| methionyl-tRNA synthetase [Pusillimonas sp. T7-7]
gi|330429369|gb|AEC20703.1| methionyl-tRNA synthetase [Pusillimonas sp. T7-7]
Length = 690
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 19/158 (12%), Positives = 41/158 (25%), Gaps = 17/158 (10%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPINDA 95
HIG+ I D+ R +R V +V DD I+ +A E +
Sbjct: 19 HIGHIMEYIQADIWVRSMRMSG--HTVHFV----GADDAHGAPIMLKAESEGIT------ 66
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPR-ATNHIPQMIYLIQNIILHGHAYEANNEIIF 154
+ ++ + + + +I + + + G E +
Sbjct: 67 PQALVARYAAERPQYLNGFHIKFDHWHSTDSAENIELSQDIYRRLKAAGFIDTRTIEQFY 126
Query: 155 DTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
D + + + A +
Sbjct: 127 DPVKGMFLPDRYIKGECPRCHAKDQYGDSCESCGAVYA 164
>gi|304440167|ref|ZP_07400058.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
gi|304371430|gb|EFM25045.1| isoleucine--tRNA ligase [Peptoniphilus duerdenii ATCC BAA-1640]
Length = 1032
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 39/255 (15%), Positives = 72/255 (28%), Gaps = 17/255 (6%)
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES 206
+ + S + ++ + H K R + W
Sbjct: 461 CSCGNVRSIGSKEELVKEAIEDIDESVELHRPYVDNVHLKCDKCGKEMNREKDVIDVWFD 520
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWI 266
WH D G+D + +A S N+ +
Sbjct: 521 SGAMPFAQWHYPFEHKDDFDQLFPADFICEGIDQTRGWFYSLLAISTYVTGKSPYKNVLV 580
Query: 267 HNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR-EPIDFTVQ 325
++ L+ G+KMSKS GN + EL + A V+R ++ P F
Sbjct: 581 NDLILDKYGKKMSKSKGNTVNPFELF-------NKYGADVVRWYLIYVSPPWAPTKFDED 633
Query: 326 RLTEAEILLSK-------WPQTSTSKGIIDPAVLSALYNDLNT--VSAIQALHKLAREST 376
L E E + + + IDP ++ D I + L +
Sbjct: 634 GLREVESKFFRSLRNIYNFFSLYANTDGIDPRDMNVDEKDYTLIDKWFISKYNSLVKSVN 693
Query: 377 KNHDLLPIFNASAHI 391
++ ++ + I
Sbjct: 694 EDMEIFELTKVVRDI 708
>gi|300788535|ref|YP_003768826.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
gi|299798049|gb|ADJ48424.1| arginyl-tRNA synthetase [Amycolatopsis mediterranei U32]
Length = 574
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 17/31 (54%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
P V H+G+ R ++ D L RLLR+ E
Sbjct: 128 PNVAKEMHVGHLRSSVIGDALARLLRFAGHE 158
>gi|300772911|ref|ZP_07082780.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33861]
gi|300759082|gb|EFK55909.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33861]
Length = 1024
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 426 SSADYIRKQLESKGFILED 444
+++D IR+QL + ++ED
Sbjct: 640 ANSDRIREQLSAMNILVED 658
>gi|227537265|ref|ZP_03967314.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33300]
gi|227242869|gb|EEI92884.1| translation initiation factor IF-2 [Sphingobacterium spiritivorum
ATCC 33300]
Length = 1025
Score = 37.0 bits (84), Expect = 6.5, Method: Composition-based stats.
Identities = 7/19 (36%), Positives = 14/19 (73%)
Query: 426 SSADYIRKQLESKGFILED 444
+++D IR+QL + ++ED
Sbjct: 641 ANSDRIREQLSAMNILVED 659
>gi|260429181|ref|ZP_05783158.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
gi|260419804|gb|EEX13057.1| leucyl-tRNA synthetase [Citreicella sp. SE45]
Length = 856
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R + DV+ R + V +
Sbjct: 45 GRIHIGHVRNYTMGDVIARYKKQNGF--NVLHPMGF 78
>gi|167561950|ref|ZP_02354866.1| methionyl-tRNA synthetase [Burkholderia oklahomensis EO147]
Length = 710
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 24/167 (14%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPIND 94
HIG+ I DV R +R + E Y+ DD ++ RA QE +
Sbjct: 25 IHIGHLVEYIQTDVWVRTMRMHGHEIY--YI----GADDTHGTPVMLRAEQEGVT----- 73
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILH---------GHA 145
+ + ++ +D ++ + I + A
Sbjct: 74 -PKQLIERVWREHKRDFDSFGVSFDNFYTTDSDENRVLSEKIYLALKDAGFIAEREIEQA 132
Query: 146 YEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
Y+ E+ I K Y + +
Sbjct: 133 YDPVKEMFLPDRFIKGECPKCHAKDQYGDSCEVCGTTYQPTDLVNPY 179
>gi|71892230|ref|YP_277963.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
gi|109894973|sp|Q492L0|SYR_BLOPB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|71796336|gb|AAZ41087.1| arginyl-tRNA synthetase [Candidatus Blochmannia pennsylvanicus str.
BPEN]
Length = 581
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 12/46 (26%), Positives = 20/46 (43%), Gaps = 2/46 (4%)
Query: 19 QAIDPSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
P I + Y GP V H+G+ R ++ D + R+L +
Sbjct: 109 TPATPKTIVIDYS-GPNVAKEMHVGHLRSTVIGDSIARVLSFLGHN 153
>gi|57641396|ref|YP_183874.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
gi|62296831|sp|Q8NKR7|SYL_PYRKO RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|57159720|dbj|BAD85650.1| leucyl-tRNA synthetase [Thermococcus kodakarensis KOD1]
Length = 967
Score = 37.0 bits (84), Expect = 6.6, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 11/56 (19%)
Query: 16 TEFQA---IDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ P + Y TV Y H+G+AR + DV+ R R
Sbjct: 21 RVFEPDRKAKPKEKKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 73
>gi|328766262|gb|EGF76318.1| hypothetical protein BATDEDRAFT_14978 [Batrachochytrium
dendrobatidis JAM81]
Length = 554
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYY 61
V HIG+ I+ D L R +
Sbjct: 26 VNAVPHIGHLYSAILADSLKRWFEFKG 52
>gi|306831942|ref|ZP_07465097.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
gi|304425868|gb|EFM28985.1| methionine--tRNA ligase [Streptococcus gallolyticus subsp.
gallolyticus TX20005]
Length = 667
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 29/181 (16%), Positives = 62/181 (34%), Gaps = 11/181 (6%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA- 95
HIG+A I DVL R R E V Y +T +D+ KI ++A + +
Sbjct: 21 HIGSAYTTIACDVLARYKRMMNHE--VFY---LTGLDEHGQKIQQKAEEAGITPQAYVDG 75
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHA--YEANNEII 153
++ K + + + + + + + +I L ++ Y ++E
Sbjct: 76 MAADVKKLWEMLEISYDKFIRTTDDYHEKVVADVFEKLLAQDDIYLGEYSGWYSVSDEEF 135
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRP 213
F S + K+ + ++ + L K + + + + +P
Sbjct: 136 FTESQLEEVFRDENGKVIGGIAPSGHEVEWVSEESYFLRLGKYADRLVEFFHTHPDFIQP 195
Query: 214 G 214
Sbjct: 196 D 196
>gi|296242280|ref|YP_003649767.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
gi|296094864|gb|ADG90815.1| leucyl-tRNA synthetase [Thermosphaera aggregans DSM 11486]
Length = 968
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 11/49 (22%), Positives = 22/49 (44%), Gaps = 3/49 (6%)
Query: 18 FQA-IDPSNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ ++ S ++ ++ P Y HIG+ R + D++ R R
Sbjct: 30 FEPKVEESKVKYFLTVPYPYTNGPLHIGHGRTYTIGDIIARFKRLTGYN 78
>gi|269219680|ref|ZP_06163534.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
gi|269210922|gb|EEZ77262.1| valyl-tRNA synthetase [Actinomyces sp. oral taxon 848 str. F0332]
Length = 894
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D + R R K V Y DD
Sbjct: 65 PTVSGSLHVGHVFSYTHTDTMARYQRMRG--KSVFYPMG---WDD 104
>gi|256027519|ref|ZP_05441353.1| leucyl-tRNA synthetase [Fusobacterium sp. D11]
Length = 872
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 27/219 (12%), Positives = 54/219 (24%), Gaps = 27/219 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 62 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 110
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
I T N + + + + +L + + G Y+ +
Sbjct: 111 VIWTKSNIENMKRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 170
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 171 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 230
Query: 208 WGRGRPGWHIECSAMSSHY----LGKVFDIHGGGLDLIF 242
+ W + G+ I +D I+
Sbjct: 231 VLTMQKNWIGKSFGTELKLKVVETGEDLPIFTTRIDTIY 269
>gi|189460088|ref|ZP_03008873.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
gi|189433249|gb|EDV02234.1| hypothetical protein BACCOP_00724 [Bacteroides coprocola DSM 17136]
Length = 680
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN-HIPQMIYLIQNIILHGHAYE 147
+ I + + ++ H + + E
Sbjct: 70 T------PQDIVDRYHTLIRDSFKEFGISFDVYGRTSSKIHHDTASDFFRKLYDKNEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + + +K
Sbjct: 124 KTSMQYYDEEAHTFLADRYITGECPRCHAEGAYGDQCEKC 163
>gi|307107312|gb|EFN55555.1| hypothetical protein CHLNCDRAFT_57875 [Chlorella variabilis]
Length = 309
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 6/34 (17%)
Query: 426 SSADYIRKQ-LESKGFILEDYKNPDNGQRMTRWK 458
++ D +R L G LED + + WK
Sbjct: 146 AACDSVRDDTLVELGIRLEDRPDGSSV-----WK 174
>gi|307106870|gb|EFN55115.1| hypothetical protein CHLNCDRAFT_31569 [Chlorella variabilis]
Length = 598
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 34/181 (18%), Positives = 56/181 (30%), Gaps = 18/181 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDID---DKIIERARQEHPSIP 91
V H+G+A P I D L R R + VT+ IT D +KI A +
Sbjct: 72 VNAAPHMGSAYPTIAADALARFQRLQG--RRVTF---ITGTDEHGEKIALAAAARGMAPK 126
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY--EAN 149
+ + + Q + + H ++ +++ + G Y +
Sbjct: 127 --EHCDDVVASYKQLWR---DLDIGYDSFIRTTDARHEALVVSVLERVWQRGDIYKADYE 181
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
D Y + D+ R P K+ F L K +E SP
Sbjct: 182 GHYCVDCEE---YKDEADMDADKNCPVHRKPCVERKEENYFFALSKYQAQLEELCSSPGT 238
Query: 210 R 210
Sbjct: 239 C 239
>gi|297800908|ref|XP_002868338.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
lyrata]
gi|297314174|gb|EFH44597.1| hypothetical protein ARALYDRAFT_493536 [Arabidopsis lyrata subsp.
lyrata]
Length = 798
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 43/388 (11%), Positives = 83/388 (21%), Gaps = 53/388 (13%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQ-----E 86
P V + H+GN ++ DV R R Y+ TD + E
Sbjct: 26 PYVNNVPHLGNIIGCVLSADVYARYCRLRGYNA--IYICG-TD----------EYGTATE 72
Query: 87 HPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLI-QNIILHGH- 144
++ N I K + +T ++ I + + +
Sbjct: 73 TKALEENCTPKEICDKYHAIHKEVYDWFDISFDKFGRTSTPEQTEVCQAIFKKLWDNKWL 132
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGW 204
+ ++ DT + Y K + P
Sbjct: 133 SENTMQQLYCDT------CKKFLADRLVEGSCPFEGCNYDSARGDQC--EKCGKLLNP-- 182
Query: 205 ESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANI 264
E I D +F + A
Sbjct: 183 ------------TELKDPKCKVCQNTPRI--RDTDHLFIELPLLKDRLEKYINETSVAGS 228
Query: 265 WIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT--HYREPIDF 322
W N IT +L + V + + +
Sbjct: 229 WSQNAIQTTNAWLRDGLRQRCIT-RDLKWGVPVPHEKYKEKVFYVWFDAPIGYVSITSCY 287
Query: 323 TVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKL-ARESTKNHDL 381
T + + + K + + L T + + E D
Sbjct: 288 TSEWEKWWKNPENVELYQFMGKDNVPFHTVMFPSTQLGTGENWTLMKTISVTEYLNYEDG 347
Query: 382 LPIFNASAHILGIEVCKEHLNKNISIAI 409
+ + G + + NI + +
Sbjct: 348 KFSKSKGVGVFG----NDVKDTNIPVEV 371
>gi|194244995|gb|ACF35265.1| glutamyl-tRNA synthetase [Streptococcus parasanguinis]
Length = 485
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 43/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMREEEKAAYIAEREAAGVIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D + + N+ + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKMDWMSNEYIKNADLATIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|169833404|ref|YP_001695432.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
gi|238688313|sp|B1I9D7|SYE_STRPI RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|168995906|gb|ACA36518.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae Hungary19A-6]
Length = 486
Score = 37.0 bits (84), Expect = 6.7, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELVAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWIIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|158334219|ref|YP_001515391.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
gi|189082976|sp|B0C1R1|SYL_ACAM1 RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|158304460|gb|ABW26077.1| leucyl-tRNA synthetase [Acaryochloris marina MBIC11017]
Length = 855
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYG 62
H+G+ R ++ DV+ RL R
Sbjct: 49 HVGHTRNYVITDVIARLKRMQGY 71
>gi|149202735|ref|ZP_01879707.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
gi|149144017|gb|EDM32051.1| arginyl-tRNA synthetase [Roseovarius sp. TM1035]
Length = 581
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 12/31 (38%), Positives = 15/31 (48%), Gaps = 2/31 (6%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
PT H+G+ R + D L RLL Y E
Sbjct: 133 PT--GPLHVGHTRGAVFGDALARLLDYVGYE 161
>gi|299144832|ref|ZP_07037900.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
gi|298515323|gb|EFI39204.1| methionine--tRNA ligase [Bacteroides sp. 3_1_23]
Length = 679
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R T H + + G
Sbjct: 70 T------PQDVVDRYHSLIKKSFEEFGIS-FDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|156937943|ref|YP_001435739.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
gi|187647728|sp|A8ABN0|SYM_IGNH4 RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|156566927|gb|ABU82332.1| methionyl-tRNA synthetase [Ignicoccus hospitalis KIN4/I]
Length = 561
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 24/164 (14%), Positives = 44/164 (26%), Gaps = 21/164 (12%)
Query: 34 TVYDFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
TV H+GN ++ DV R LR + V +V D+ I AR+
Sbjct: 15 TV---PHLGNLIGSVLSADVFARFLRLMGED--VVFVSG---SDEHGTPIEVEARKRGVE 66
Query: 90 IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYE 147
+T K + K + + R N H+ + I +G+ +
Sbjct: 67 ------PKELTDKVHEYVKKLFEKYLIS-FDNYTRTHNPVHMEFVRETFMKIYENGYIFT 119
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + ++
Sbjct: 120 QEMVMPYCPKDKMFLPDRFTVGTCPYCGAPDARGDQCERCGKLL 163
>gi|148989886|ref|ZP_01821169.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
gi|147924671|gb|EDK75756.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP6-BS73]
Length = 486
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELVAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|22474523|dbj|BAC10608.1| leucyl-tRNA synthetase [Thermococcus kodakaraensis]
Length = 967
Score = 37.0 bits (84), Expect = 6.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 11/56 (19%)
Query: 16 TEFQA---IDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ P + Y TV Y H+G+AR + DV+ R R
Sbjct: 21 RVFEPDRKAKPKEKKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 73
>gi|332365884|gb|EGJ43641.1| glutamate--tRNA ligase [Streptococcus sanguinis SK355]
Length = 485
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 47/379 (12%), Positives = 98/379 (25%), Gaps = 50/379 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R+Y G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHYGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHKNYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-----------YHKKNPADFILWKRSTP 199
+ F +E+ E + K
Sbjct: 118 RQEAAGETPRYINEFLGMSEEEKAAYIAEREAAGIIPTVRLAVNEAGVYKWTDMVKGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-- 367
+ + + E L K P K + D +T+ A+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPY 347
Query: 368 LHKLARESTKNHDLLPIFN 386
L + R + K L+ ++
Sbjct: 348 LAEAGRLTDKAEKLVELYK 366
>gi|331265567|ref|YP_004325197.1| Glutamyl-tRNA synthetase (glutamate-tRNA ligase) [Streptococcus
oralis Uo5]
gi|326682239|emb|CBY99856.1| Glutamyl-tRNA synthetase (glutamate-tRNA ligase) [Streptococcus
oralis Uo5]
Length = 486
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 100/358 (27%), Gaps = 42/358 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + ++ + L + +
Sbjct: 60 LENL-RWLGIDWDESPETHSNYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKVAYIAEREAAGIIPTVRLAVNESGIYQWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLATIFEMAK 345
>gi|114765738|ref|ZP_01444836.1| leucyl-tRNA synthetase [Pelagibaca bermudensis HTCC2601]
gi|114541955|gb|EAU44990.1| leucyl-tRNA synthetase [Roseovarius sp. HTCC2601]
Length = 856
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R + DV+ R + V +
Sbjct: 45 GRIHIGHVRNYTMGDVIARYKKQNGF--NVLHPMGF 78
>gi|326568654|gb|EGE18725.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC7]
Length = 683
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|254786912|ref|YP_003074341.1| arginyl-tRNA synthetase [Teredinibacter turnerae T7901]
gi|259511658|sp|C5BNG6|SYR_TERTT RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|237687266|gb|ACR14530.1| arginine--tRNA ligase [Teredinibacter turnerae T7901]
Length = 578
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 21/104 (20%), Positives = 30/104 (28%), Gaps = 19/104 (18%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPINDAISI 98
H+G+ R I+ D L R+L + DK+I RQ H +
Sbjct: 129 MHVGHLRSTIIGDCLARILEFNG---------------DKVI---RQNHVGDWGTQFGML 170
Query: 99 ITSKNTQQFVKDTTRLACLA-PTHQPRATNHIPQMIYLIQNIIL 141
I TQ D A + +A H
Sbjct: 171 IAELETQLSDGDKPDFALKDLESFYQKAKAHFDTDAAFATKARD 214
>gi|124028037|ref|YP_001013357.1| arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
gi|123978731|gb|ABM81012.1| Arginyl-tRNA synthetase [Hyperthermus butylicus DSM 5456]
Length = 661
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 15/32 (46%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
HIG+AR + D L R+LR + N
Sbjct: 143 HIGHARNASLGDTLARMLRARGHVVQTRFYIN 174
>gi|108761325|ref|YP_632907.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
gi|108465205|gb|ABF90390.1| leucyl-tRNA synthetase [Myxococcus xanthus DK 1622]
Length = 831
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 12/25 (48%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R ++ DV R R +
Sbjct: 48 MHMGHVRNYLLGDVYARYFRMKGFD 72
>gi|82703057|ref|YP_412623.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
gi|123727136|sp|Q2Y7P0|SYM_NITMU RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|82411122|gb|ABB75231.1| methionyl-tRNA synthetase [Nitrosospira multiformis ATCC 25196]
Length = 728
Score = 37.0 bits (84), Expect = 6.9, Method: Composition-based stats.
Identities = 21/148 (14%), Positives = 40/148 (27%), Gaps = 18/148 (12%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R + E V YV DD I+ RA QE +
Sbjct: 17 GSIHLGHLVEYIQTDIWVRFQKMQ--EHEVHYVC----ADDAHGTPIMLRAEQEGIT--- 67
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHG--HAYEANN 150
+ + + D + + I + G A +
Sbjct: 68 ---PRQLIDRVWHEHKTDFDGFHIGFDHYYTTDSPENQAFCEDIYRQLRAGELIAKRSVE 124
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTR 178
+ + + + + G +
Sbjct: 125 QFYDPVKQMFLPDRYIKGECPRCHAGDQ 152
>gi|332365181|gb|EGJ42944.1| glutamate--tRNA ligase [Streptococcus sanguinis SK1059]
Length = 485
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 46/379 (12%), Positives = 97/379 (25%), Gaps = 50/379 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R++ G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-----------YHKKNPADFILWKRSTP 199
+ F E+ E + K
Sbjct: 118 RQEAAGETPRYINEFLGMSEAEKAAYIAEREAAGVIPTVRLAVNEAGVYKWTDMVKGEIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-- 367
+ + + E L K P K + D +T+ A+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPY 347
Query: 368 LHKLARESTKNHDLLPIFN 386
L + R + K L+ ++
Sbjct: 348 LEEAGRLTDKAEKLVELYK 366
>gi|326574245|gb|EGE24193.1| methionyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
Length = 683
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|326572648|gb|EGE22637.1| methionyl-tRNA synthetase [Moraxella catarrhalis CO72]
Length = 683
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|324995927|gb|EGC27838.1| glutamate--tRNA ligase [Streptococcus sanguinis SK678]
Length = 485
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 47/379 (12%), Positives = 98/379 (25%), Gaps = 50/379 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R++ G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEK-----------YHKKNPADFILWKRSTP 199
+ F DE+ E + K
Sbjct: 118 RQEAAGETPRYINEFLGMSEDEKAAYIAEREAAGIIPTVRLAVNEAGVYKWTDMVKGDIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-- 367
+ + + E L K P K + D +T+ A+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPY 347
Query: 368 LHKLARESTKNHDLLPIFN 386
L + R + K L+ ++
Sbjct: 348 LEEAGRLTDKAEKLVELYK 366
>gi|296113614|ref|YP_003627552.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295921308|gb|ADG61659.1| methionyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 683
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|293364683|ref|ZP_06611404.1| glutamate--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307702939|ref|ZP_07639887.1| glutamyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
gi|291316941|gb|EFE57373.1| glutamate--tRNA ligase [Streptococcus oralis ATCC 35037]
gi|307623619|gb|EFO02608.1| glutamyl-tRNA synthetase [Streptococcus oralis ATCC 35037]
Length = 486
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 99/358 (27%), Gaps = 42/358 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGIDWDESPETHENYRQSERLELYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLTTIFEMAK 345
>gi|240103889|ref|YP_002960198.1| leucyl-tRNA synthetase [Thermococcus gammatolerans EJ3]
gi|239911443|gb|ACS34334.1| Leucyl-tRNA synthetase (leuS) [Thermococcus gammatolerans EJ3]
Length = 968
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 11/56 (19%)
Query: 16 TEFQA---IDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ P + Y TV Y H+G+AR + DV+ R R
Sbjct: 22 RVFEPDRKAKPKEKKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 74
>gi|153806949|ref|ZP_01959617.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
gi|149130069|gb|EDM21279.1| hypothetical protein BACCAC_01225 [Bacteroides caccae ATCC 43185]
Length = 679
Score = 37.0 bits (84), Expect = 7.0, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R T H + + G
Sbjct: 70 T------PQDVVDRYHTLIKKSFEEFGIS-FDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|148242327|ref|YP_001227484.1| methionyl-tRNA synthetase [Synechococcus sp. RCC307]
gi|147850637|emb|CAK28131.1| Methionyl-tRNA synthetase [Synechococcus sp. RCC307]
Length = 510
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 23/162 (14%), Positives = 38/162 (23%), Gaps = 15/162 (9%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D HIG+ + D L R R + V + IT D+ KI A
Sbjct: 12 VNDKPHIGSVYTTLAVDTLARFKRLSG--ENVVF---ITGCDEHGQKIQRTAESAGIDPQ 66
Query: 92 I--NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEAN 149
+ S S +Q + + + P HQ ++ I
Sbjct: 67 QHCDQISSTFASVWSQWQISNDRFIRTTDPRHQSIVEQFFARVEANGDIIEGRQ-----Q 121
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ ++
Sbjct: 122 GWYCVACEEYKDDPKEAQSPHCPIHQKPLEWRDEANLFFRLS 163
>gi|300122665|emb|CBK23232.2| unnamed protein product [Blastocystis hominis]
Length = 601
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 1/33 (3%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D L R+L + E + +V
Sbjct: 146 DMHVGHLRSTIIGDSLARILEFCGHEVIRINHV 178
>gi|289547884|ref|YP_003472872.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
gi|289181501|gb|ADC88745.1| leucyl-tRNA synthetase [Thermocrinis albus DSM 14484]
Length = 604
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 43/297 (14%), Positives = 80/297 (26%), Gaps = 35/297 (11%)
Query: 14 KITEFQAIDPSNIRMYV--CGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
+ F+ + ++YV P H+G+ R + D + R LR K V +
Sbjct: 19 EKGVFKTEEKGE-KVYVLEMFPYPSGRIHMGHVRNYTIGDAIARFLRMRG--KAVLHPMG 75
Query: 72 ITDIDDKIIERAR---QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATN- 127
D A E+ +I + T N RL + AT
Sbjct: 76 ---WD------AFGLPAENAAIKHGVHPAQWTKSNISYMRDQLRRLGFSYDWDREIATCD 126
Query: 128 --HIPQMIYLIQNIILHGHAYEANNEI-IFDTSSIPNYGSF----SRRKIDEQKMGTRVP 180
+ ++ + G AY E+ + + +VP
Sbjct: 127 PEYYRWNQWIFLKFLEKGLAYRKEAEVNYCPNDETVLANEQVIEGRCWRCGTPIVRKKVP 186
Query: 181 EKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHY--LGKVFDIHGGGL 238
Y + L + +E W + W + + + +I
Sbjct: 187 SWYLRITQYAERLLEDLEKLEGKWPERVIAQQKNWIGKSTGAIVKFPVGDSYVEIFTTRP 246
Query: 239 DLIF--------PHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFIT 287
D IF P H + + R ++ ++ R S+
Sbjct: 247 DTIFGATFLVLAPEHPMTLTLAQMGGREKEVQKFLRKMESMSTRERSTSEEKEGVFL 303
>gi|283768674|ref|ZP_06341586.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
gi|283105066|gb|EFC06438.1| methionyl-tRNA synthetase, alpha subunit [Bulleidia extructa W1219]
Length = 647
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 42/410 (10%), Positives = 94/410 (22%), Gaps = 63/410 (15%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R + + V + T D+ K+ ++A+++ +
Sbjct: 20 PHIGNVYEIVLADAIARYKKMEGYD--VRFQ---TGTDEHGQKVEQKAQEQGKTPKAFVD 74
Query: 96 ISI------------ITSKNTQQFVKDTTRLACLAPTH-----------QPRATNHIPQM 132
+ + D + +
Sbjct: 75 EMATIVKKQFDVMNVQYDRFIRTTDADHEKQVQKIFRKFYDQGDIYKGEYEGMYCEEDEA 134
Query: 133 IYLIQNIILHGHAYEANNEI--------IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
+ + G ++ F S + + +
Sbjct: 135 FFTTSQLTEEGCCPVCGGKVKPMKEETYFFRMSKYADRLMKYIEDHPDFIQPESRKNEIV 194
Query: 185 KKNPA---------------DFILWKRSTPMEPGWESPWGRGRPGWHIE----CSAMSSH 225
+ + W G E +
Sbjct: 195 NNFLKPGLQDLSVSRTSFKWGIPVDFDPKHVIYVWIDALSNYITGLGYEVDGNHDPLFKK 254
Query: 226 YLGKVFDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNF 285
Y D+H G D+I H D + +L + KMSKS GN
Sbjct: 255 YW--PADLHLIGKDIIRFHTIYWPIMLMALD--LPLPKQVFGHPWLMVGESKMSKSLGNV 310
Query: 286 ITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFTV-QRLTEAEILLSKWPQTSTSK 344
I ++++ + H + + S
Sbjct: 311 IYADDMVHVFGVDAMRYIFLHEMPFAQDGHITYDLMMERINSDLANNMGNLVNRTISMQN 370
Query: 345 GIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLPIFNASAHILGI 394
+ V + ++ + + + + L + +A IL +
Sbjct: 371 KYFNGIVANPHVDETLDTEFKRTILGKVTDVKAQMEELRVQDAIGTILEL 420
>gi|262037521|ref|ZP_06010980.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
gi|261748451|gb|EEY35831.1| arginine--tRNA ligase [Leptotrichia goodfellowii F0264]
Length = 575
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 10/26 (38%), Positives = 14/26 (53%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R I+ D L R+L Y +
Sbjct: 127 RMHIGHLRSTIIGDSLKRILEYVGFK 152
>gi|187777332|ref|ZP_02993805.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
15579]
gi|187774260|gb|EDU38062.1| hypothetical protein CLOSPO_00884 [Clostridium sporogenes ATCC
15579]
Length = 645
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 21/151 (13%), Positives = 38/151 (25%), Gaps = 19/151 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
HIGN + D L R R + V +T D+ KI A + +
Sbjct: 20 HIGNTYTTVAADTLARFKRLTGYD-----VMFLTGTDEHGQKIQRLAEAKGVT------P 68
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAYE--ANNEI 152
+ + R T H+ + + + + G Y+
Sbjct: 69 KAYVDEIVAGIKDLWKMMNI-DYDKFIRTTDDYHVELVQKIFKTLCDKGDIYKSEYEGWY 127
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKY 183
S K + ++
Sbjct: 128 CTPCESFWTETQLVEGKCPDCGRPVEKAKEE 158
>gi|124486221|ref|YP_001030837.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
gi|124363762|gb|ABN07570.1| leucyl-tRNA synthetase [Methanocorpusculum labreanum Z]
Length = 932
Score = 37.0 bits (84), Expect = 7.1, Method: Composition-based stats.
Identities = 8/25 (32%), Positives = 12/25 (48%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYY 61
H+G+ R I+ DV+ R R
Sbjct: 44 GAMHVGHGRTYIIPDVVARFWRMQG 68
>gi|329962356|ref|ZP_08300361.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
gi|328530217|gb|EGF57098.1| methionine--tRNA ligase [Bacteroides fluxus YIT 12057]
Length = 680
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKKSFEDFGISFDVYSRTTSETHHETASDFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|326560048|gb|EGE10443.1| methionyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 683
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|326559611|gb|EGE10025.1| methionyl-tRNA synthetase [Moraxella catarrhalis 7169]
gi|326565529|gb|EGE15700.1| methionyl-tRNA synthetase [Moraxella catarrhalis 12P80B1]
gi|326567709|gb|EGE17815.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC1]
gi|326568781|gb|EGE18851.1| methionyl-tRNA synthetase [Moraxella catarrhalis BC8]
gi|326575031|gb|EGE24960.1| methionyl-tRNA synthetase [Moraxella catarrhalis O35E]
Length = 683
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 17/120 (14%), Positives = 34/120 (28%), Gaps = 17/120 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R ++ VTYV DD I+ +A+ +
Sbjct: 18 GPIHLGHLVEYIQTDIWVRAMKAMG--HNVTYVC----ADDAHGTAIMLKAQDNGITPEE 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
A + + + + + Q L + Y ++
Sbjct: 72 QIA-------TVKASHEKDFAGFLIDFDNYHSTHSSENQYFSQKIYTTLKQNGYIFTKDV 124
>gi|298385978|ref|ZP_06995535.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
gi|298261206|gb|EFI04073.1| methionine--tRNA ligase [Bacteroides sp. 1_1_14]
Length = 679
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 40/160 (25%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D + +K
Sbjct: 124 KTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|157497158|gb|ABV58323.1| arginyl-tRNA synthetase [Wolbachia endosymbiont of Dirofilaria
immitis]
Length = 189
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 14/39 (35%), Positives = 17/39 (43%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+ R I DVL LL+ + Y N
Sbjct: 128 PT--GPLHIGHVRGAIFGDVLANLLKKVGYQTTKEYYIN 164
>gi|29348342|ref|NP_811845.1| methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|253569289|ref|ZP_04846699.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
gi|68566005|sp|Q8A3M1|SYM_BACTN RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|29340246|gb|AAO78039.1| Methionyl-tRNA synthetase [Bacteroides thetaiotaomicron VPI-5482]
gi|251841308|gb|EES69389.1| methionyl-tRNA synthetase [Bacteroides sp. 1_1_6]
Length = 679
Score = 37.0 bits (84), Expect = 7.2, Method: Composition-based stats.
Identities = 20/160 (12%), Positives = 40/160 (25%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGV 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHYLIKKSFEEFGVSFDVYSRTTSKTHHELASDFFKTLYNKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+E +D + +K
Sbjct: 124 KTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|89100733|ref|ZP_01173588.1| glutamyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
gi|89084550|gb|EAR63696.1| glutamyl-tRNA synthetase [Bacillus sp. NRRL B-14911]
Length = 485
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 42/395 (10%), Positives = 95/395 (24%), Gaps = 54/395 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R G+ + I+D ++R E
Sbjct: 13 PT--GHLHIGNARTA-----LFNYLFARSKGGKFIIR-------IEDTDLKR-NIEGGEE 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ-NIILHGHAYEAN 149
+ + R + L+ ++ + E
Sbjct: 58 SQLKYLQWLG---IDWDESIDKDGGYGPYRQSERNDIYQELYQELLDKDLAYKCYCTEEE 114
Query: 150 NEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWG 209
E + K R + + P+ + +
Sbjct: 115 LEAEREEQMARGDNPQYSGKCRHLTQEEREKLEAEGRRPSIRFIVPKGKVYAFNDMVKDE 174
Query: 210 RGRPGWHIECSAMSSHYLGKVFDIHGGGLDLI-----------FPHHENEIAQSCCADRI 258
+ ++ D + + + A
Sbjct: 175 VSFESDGFGDFVIVKKDGIPTYNFAVAADDHMMKISHVLRGDDHISNTPKQLMIYEAFGW 234
Query: 259 EKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYRE 318
E + + K + +I + +E + + + + + +
Sbjct: 235 EPP----VFGHMTLIVNESRKKLSKRDESIIQFIEQYEDL--GYLPEALFNFIALLGWSP 288
Query: 319 PIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKN 378
+ E I + + + S S + D L+ + N + L +++
Sbjct: 289 AGE-EEIFTKEELINIFEADRLSKSPALFDKQKLTWMNNQYIKQEELDKLVEIS------ 341
Query: 379 HDLLPIFNASAHILGIEVCKEHLNKNISIAIEKLV 413
LP + + E+L + L+
Sbjct: 342 ---LPHLIKAGKV------SENLTAADEEWVRGLI 367
>gi|15901888|ref|NP_346492.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|111657115|ref|ZP_01407902.1| hypothetical protein SpneT_02001662 [Streptococcus pneumoniae
TIGR4]
gi|148998140|ref|ZP_01825653.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|168577101|ref|ZP_02722921.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|307068683|ref|YP_003877649.1| glutamyl- and glutaminyl-tRNA synthetase [Streptococcus pneumoniae
AP200]
gi|30173202|sp|Q97NG1|SYE_STRPN RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|14973580|gb|AAK76132.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae TIGR4]
gi|147756150|gb|EDK63193.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP11-BS70]
gi|183577271|gb|EDT97799.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae MLV-016]
gi|306410220|gb|ADM85647.1| Glutamyl- and glutaminyl-tRNA synthetase [Streptococcus pneumoniae
AP200]
Length = 486
Score = 37.0 bits (84), Expect = 7.3, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREEFIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|325281890|ref|YP_004254432.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
gi|324313699|gb|ADY34252.1| Methionyl-tRNA synthetase [Odoribacter splanchnicus DSM 20712]
Length = 676
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 16/103 (15%), Positives = 28/103 (27%), Gaps = 24/103 (23%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR E V ++ IT +A++E
Sbjct: 18 GPVHIGHLAGVYVPADIYVRYLRQKGEE--VVFIGGSDEHGVPIT-------IKAQKEGV 68
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
+ I + Q R ++
Sbjct: 69 T------PQDIVDRYHQIIKDSFEEFGIS-FDIYSRTSSKTHH 104
>gi|237717171|ref|ZP_04547652.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
gi|237721837|ref|ZP_04552318.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|262405941|ref|ZP_06082491.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|294647899|ref|ZP_06725451.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294806294|ref|ZP_06765141.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|229443154|gb|EEO48945.1| methionyl-tRNA synthetase [Bacteroides sp. D1]
gi|229448706|gb|EEO54497.1| methionyl-tRNA synthetase [Bacteroides sp. 2_2_4]
gi|262356816|gb|EEZ05906.1| methionyl-tRNA synthetase [Bacteroides sp. 2_1_22]
gi|292636807|gb|EFF55273.1| methionine--tRNA ligase [Bacteroides ovatus SD CC 2a]
gi|294446550|gb|EFG15170.1| methionine--tRNA ligase [Bacteroides xylanisolvens SD CC 1b]
gi|295085632|emb|CBK67155.1| methionyl-tRNA synthetase [Bacteroides xylanisolvens XB1A]
Length = 679
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R T H + + G
Sbjct: 70 T------PQDVVDRYHSLIKKSFEEFGIS-FDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|237725990|ref|ZP_04556471.1| methionyl-tRNA synthetase [Bacteroides sp. D4]
gi|229435798|gb|EEO45875.1| methionyl-tRNA synthetase [Bacteroides dorei 5_1_36/D4]
Length = 694
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 17/160 (10%), Positives = 38/160 (23%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 33 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 83
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + E
Sbjct: 84 T------PQDVVDRYHTLIKESFKEFGISFDIYSRTTSKTHHELASEFFKTLYDKSEFIE 137
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 138 KTSMQYYDEEAHQFLADRYIIGECPHCHAEGAYGDQCEKC 177
>gi|298491056|ref|YP_003721233.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
gi|298232974|gb|ADI64110.1| arginyl-tRNA synthetase ['Nostoc azollae' 0708]
Length = 585
Score = 37.0 bits (84), Expect = 7.4, Method: Composition-based stats.
Identities = 9/32 (28%), Positives = 18/32 (56%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ D + R+L ++ E + +V
Sbjct: 132 MHVGHLRSTIIGDCIARILEFHGHEVLRLNHV 163
>gi|296270263|ref|YP_003652895.1| tRNA synthetase valyl/leucyl anticodon-binding protein
[Thermobispora bispora DSM 43833]
gi|296093050|gb|ADG89002.1| tRNA synthetase valyl/leucyl anticodon-binding protein
[Thermobispora bispora DSM 43833]
Length = 836
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
PTV H+G+ D + R R E V Y DD
Sbjct: 43 PTVSGSLHVGHVFSYTHTDTIARYQRMRGRE--VFYPMG---WDD 82
>gi|223933973|ref|ZP_03625931.1| glutamyl-tRNA synthetase [Streptococcus suis 89/1591]
gi|223897365|gb|EEF63768.1| glutamyl-tRNA synthetase [Streptococcus suis 89/1591]
Length = 484
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 47/377 (12%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLFARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + Q + + + +
Sbjct: 60 LENL-RWLGIDWDESPETHEQYRQSERLDIYQKYVDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ VP N W E
Sbjct: 119 QEAAGETPRYINEYLGMSEDEKAAYIAEREAAGIVPTVRLAVNETGIYKWNDMVKGEIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + YL K+ + G + + A
Sbjct: 179 EGGNIGGDWVIQKRDGYPTYNF--AVVVDDYLMKISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRRKGYMPEAVFNFIGLLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + + L + + + D + + N+ + ++ + LA+
Sbjct: 289 WNPGGEEEIFSREQFIQLFDENRLSKSPAA-FDQKKMDWMSNEYIKNADLETIFNLAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|145635709|ref|ZP_01791404.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
gi|145267032|gb|EDK07041.1| arginyl-tRNA synthetase [Haemophilus influenzae PittAA]
Length = 577
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 38/173 (21%), Gaps = 24/173 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + N+ RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVARTLEFLGH--------NV--------IRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + + + R + + + +
Sbjct: 163 GTQFGMLIAYLEKMQNEHANEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQSGDE 222
Query: 153 IFDTS-----SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
T I + + + NP + K
Sbjct: 223 YCRTMWKRLVDITMQQNQHNYDRLNVTLTEKDVMGESLYNPMLPSIVKDLKKQ 275
>gi|55378546|ref|YP_136396.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
gi|68565966|sp|Q5V1B3|SYM_HALMA RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|55231271|gb|AAV46690.1| methionyl-tRNA synthetase [Haloarcula marismortui ATCC 43049]
Length = 717
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 11/34 (32%), Positives = 14/34 (41%), Gaps = 3/34 (8%)
Query: 30 VCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYY 61
CG Y H+G+ R + D L R LR
Sbjct: 15 TCGL-PYANGDLHVGHLRTYVDGDALSRALRRIG 47
>gi|289621749|emb|CBI51660.1| unnamed protein product [Sordaria macrospora]
Length = 613
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 8/29 (27%), Positives = 14/29 (48%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGE 63
V H+G+ M++ DVL R + +
Sbjct: 73 VNASPHVGHMYSMVLADVLKRWQKLKGNQ 101
>gi|148284332|ref|YP_001248422.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
gi|166232817|sp|A5CD00|SYR_ORITB RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|146739771|emb|CAM79637.1| arginyl-tRNA synthetase [Orientia tsutsugamushi str. Boryong]
Length = 590
Score = 37.0 bits (84), Expect = 7.5, Method: Composition-based stats.
Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI 75
PT HIG+AR + DVL LL+ + Y N T +
Sbjct: 140 PT--GPLHIGHARAAVYGDVLAALLQCTGYQVTREYYVNDTGV 180
>gi|196017338|ref|XP_002118489.1| hypothetical protein TRIADDRAFT_8033 [Trichoplax adhaerens]
gi|190578862|gb|EDV19024.1| hypothetical protein TRIADDRAFT_8033 [Trichoplax adhaerens]
Length = 175
Score = 36.6 bits (83), Expect = 7.6, Method: Composition-based stats.
Identities = 14/140 (10%), Positives = 28/140 (20%), Gaps = 3/140 (2%)
Query: 171 DEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKV 230
E+ T V + + + WK S H L
Sbjct: 39 MEKCSWTSVHCSHCPQYCMEKSAWKSVLYTVVTVHSMEKTAWTSVHCSHCPQHGKMLSSD 98
Query: 231 FDIHGGGLDLIFPHHENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINE 290
+H D H C + + + ++ S T+
Sbjct: 99 CTVHCSNCDH---HSIVLYTVHCSHFTVHSMEKCLVVIVLYTVVTVTITPSYCTLYTVVT 155
Query: 291 LLETKKFGGRSWPAPVIRLA 310
+ + +
Sbjct: 156 VHLSTVCTVHRVHPLQCTVY 175
>gi|325105850|ref|YP_004275504.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
gi|324974698|gb|ADY53682.1| methionyl-tRNA synthetase [Pedobacter saltans DSM 12145]
Length = 685
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 24/154 (15%), Positives = 43/154 (27%), Gaps = 18/154 (11%)
Query: 40 HIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDK---IIERARQEHPSIPINDA 95
HIG+ I D+ R LR E+ V +V D+ I +A +E N
Sbjct: 23 HIGHLAGAYIPADLYVRYLRLK--ERDVVFVCG---SDEHGTAIANQAMKE------NTT 71
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATN--HIPQMIYLIQNIILHGHAYEANNEII 153
I K + ++L R + H + + ++E
Sbjct: 72 PRAIIDKYHTLIEECFSKLGIS-FDIYHRTSEPIHHETAQDFFRVLDNKDIFKVESSEQY 130
Query: 154 FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+D + + +K
Sbjct: 131 YDEEAHAFLADRYIKGTCPNCGDHNAYGDQCEKC 164
>gi|260435477|ref|ZP_05789447.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
gi|260413351|gb|EEX06647.1| methionyl-tRNA synthetase [Synechococcus sp. WH 8109]
Length = 514
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 21/163 (12%), Positives = 43/163 (26%), Gaps = 17/163 (10%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIP 91
V D H+G+ + D L R R + VT+V T +D+ KI A ++ S
Sbjct: 12 VNDRPHLGSTYTTLACDALARFERLQL--EKVTFV---TGVDEHGQKIQRTAERQQLSPQ 66
Query: 92 INDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY--EA 148
D ++++ + H+ + + + G +
Sbjct: 67 --DHCDKVSTRY----RDLWNQWGISNDRFVRTTNPRHLELVEQFYERVKASGDIVVGKQ 120
Query: 149 NNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
D + + +
Sbjct: 121 TGWYCVDCEEYKDDPAEAESPSCSIHRKPLEWRDEENLFFRLS 163
>gi|317478291|ref|ZP_07937456.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
gi|316905598|gb|EFV27387.1| tRNA synthetase class I [Bacteroides sp. 4_1_36]
Length = 695
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 34 GPVHIGHLAGVYVPADIYVRYLRLK--KENVIFIGGSDEHGVPIT-------IRAKKEGI 84
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 85 T------PQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFIE 138
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 139 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 178
>gi|312144034|ref|YP_003995480.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
gi|311904685|gb|ADQ15126.1| leucyl-tRNA synthetase [Halanaerobium sp. 'sapolanicus']
Length = 831
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 19/160 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERA----RQEHPSIPINDA 95
H+G+ R + DV+ R R V + D A + N
Sbjct: 49 HMGHVRVYSIGDVVARYKRMEGY--NVLHPMG---WD------AFGLPAENAAIKHGNIH 97
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT---NHIPQMIYLIQNIILHGHAYEANNEI 152
T +N + + + T ++ + + AY + +
Sbjct: 98 PKEWTWQNIAHMKEQMKAMGLSYDWDREVTTASKDYYKWTQWFFAKMFERDLAYRKESTV 157
Query: 153 -IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + E+ P + +
Sbjct: 158 NWCPSCETVLANEQVVNEGCERCGTEVEPRELEQWFLKIT 197
>gi|160884208|ref|ZP_02065211.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
gi|298479939|ref|ZP_06998138.1| methionine--tRNA ligase [Bacteroides sp. D22]
gi|156110550|gb|EDO12295.1| hypothetical protein BACOVA_02185 [Bacteroides ovatus ATCC 8483]
gi|298273748|gb|EFI15310.1| methionine--tRNA ligase [Bacteroides sp. D22]
Length = 679
Score = 36.6 bits (83), Expect = 7.7, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R T H + + G
Sbjct: 70 T------PQDVVDRYHSLIKKSFEEFGIS-FDVYSRTTSPTHHQLASDFFKTLYDKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|282601236|ref|ZP_05981162.2| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
gi|282569800|gb|EFB75335.1| methionine--tRNA ligase [Subdoligranulum variabile DSM 15176]
Length = 676
Score = 36.6 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 13/56 (23%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPS 89
D HIG+ + D + R R V +T D+ KI +A++ +
Sbjct: 23 DKLHIGHTYCTVATDAMARYKRLQGYN-----VMFLTGTDEHGQKIELKAKEAGVT 73
>gi|212223287|ref|YP_002306523.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
gi|226695265|sp|B6YST9|SYL_THEON RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|212008244|gb|ACJ15626.1| leucyl-tRNA synthetase [Thermococcus onnurineus NA1]
Length = 967
Score = 36.6 bits (83), Expect = 7.8, Method: Composition-based stats.
Identities = 14/56 (25%), Positives = 20/56 (35%), Gaps = 11/56 (19%)
Query: 16 TEFQA---IDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F+ P + Y TV Y H+G+AR + DV+ R R
Sbjct: 21 RVFEPDRNAKPKEKKFY---ITVAFPYLSGHLHVGHARTYTIPDVIARFKRMQGYN 73
>gi|288906268|ref|YP_003431490.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325979280|ref|YP_004288996.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
gi|288732994|emb|CBI14575.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus UCN34]
gi|325179208|emb|CBZ49252.1| glutamyl-tRNA synthetase [Streptococcus gallolyticus subsp.
gallolyticus ATCC BAA-2069]
Length = 485
Score = 36.6 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 53/389 (13%), Positives = 111/389 (28%), Gaps = 49/389 (12%)
Query: 23 PSNIRM-YVCGPTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD--- 74
P IR+ Y PT HIGNAR L+ L R++ G+ +V I TD
Sbjct: 2 PKKIRVRYAPSPT--GLLHIGNARTA-----LFNYLYARHHGGD----FVIRIEDTDRKR 50
Query: 75 -IDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMI 133
++D ER++ E+ + + + + + +
Sbjct: 51 HVED--GERSQLENL-KWLGMDWDESPQTHEKYRQSERLDIYQKYIDQLLAEGKAYKSYV 107
Query: 134 YLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFIL 193
+ A + + I E++ VP N +
Sbjct: 108 TEEELAAERERQEAAGETPRYINEFLGMSEDEKAAYIAEREAKGIVPTVRLAVNESGIYK 167
Query: 194 WKRSTPMEPG---------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPH 244
W + W G P ++ + + +L ++ + G +
Sbjct: 168 WHDIVKGDIEFEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTP 225
Query: 245 HENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPA 304
+ A E + L + K + + +E + + +
Sbjct: 226 KQL---MVYEALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYMP 277
Query: 305 PVIRLAMLMTHYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDL 359
+ + + + + + E L K P K + + D
Sbjct: 278 EAVFNFIALLGWNPGGEDEIFSREELIKLFDENRLSKSPAAFDQKKMDWMSNEYIKNADF 337
Query: 360 NTVSAIQA--LHKLARESTKNHDLLPIFN 386
+T+ A+ L + R + K L+ ++
Sbjct: 338 DTIFAMAKPFLEEAGRLTDKAEKLVELYK 366
>gi|90413229|ref|ZP_01221224.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
gi|90325781|gb|EAS42239.1| methionyl-tRNA synthetase [Photobacterium profundum 3TCK]
Length = 680
Score = 36.6 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 43/426 (10%), Positives = 104/426 (24%), Gaps = 47/426 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ + D+ R R E V ++ DD I+ +A+Q
Sbjct: 19 GSIHLGHMLEHVQADIWVRYQRLRGNE--VHFIC----ADDAHGTPIMLKAQQMGMEPE- 71
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYL-IQNIILHGHAYEANNE 151
I+ ++ + D + ++ ++ + G+
Sbjct: 72 -QMIAEVSKE----HQADFAGFDISFDNYHSTHSDENRELASFVYTQLKDKGYITNRTIS 126
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF-ILWKRSTPMEPGWESPWGR 210
+FD + + + + +P +
Sbjct: 127 QLFDPEKEMFLPDRFVKGTCPKCKAEDQYGDNCDNCGETYSPTDLINPKSAVSGATPIMK 186
Query: 211 GRPGWHIECSAMSS--HYLGKVFDIHGGGLDLIFPHHENEIAQSC-----CADRIEKTAN 263
+ + K + + + E+ + Q E
Sbjct: 187 DSEHFFFDLPQFEDMLKAWTKSGALQTETSNKMQEWFESGLHQWDISRDAPYFGFEIPGE 246
Query: 264 IWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYREPIDFT 323
+ S N + L+ +F + + Y + +
Sbjct: 247 TGKYFYVWLDAPIGYMGSFKNLCDKRDDLDFDEFWKKDSTTELYHFIGKDIVYFHSLFW- 305
Query: 324 VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLARESTKNHDLLP 383
+ + P G + + + A L L E + +
Sbjct: 306 ---PAMLDGAGFRKPNNVFVHGYVTVNGAKMSKSKGTFIKAGTYLEHLDPECLRYYYAAK 362
Query: 384 IFNASAHI-LGIEVCKEHLNKNISIAIEKL-------VQERLILLKMKKFSS-------- 427
+ + + L +E + +N ++ I L + +R + F+
Sbjct: 363 LNSRIDDLDLNLEDFTQRVNSDVVNKIVNLASRNAGFIAKRFEGKLSETFAEPALYAEFA 422
Query: 428 --ADYI 431
AD I
Sbjct: 423 NAADRI 428
>gi|257076387|ref|ZP_05570748.1| valyl-tRNA synthetase [Ferroplasma acidarmanus fer1]
Length = 772
Score = 36.6 bits (83), Expect = 7.9, Method: Composition-based stats.
Identities = 11/36 (30%), Positives = 14/36 (38%), Gaps = 2/36 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
PTV H+G+A D + R R V Y
Sbjct: 37 PTVSGKMHVGHAFSYPQQDFIARYKRMKGY--NVFY 70
>gi|171186028|ref|YP_001794947.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
gi|170935240|gb|ACB40501.1| arginyl-tRNA synthetase [Thermoproteus neutrophilus V24Sta]
Length = 635
Score = 36.6 bits (83), Expect = 8.0, Method: Composition-based stats.
Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
HIG+ R I+ D L RLLR+ + +DD
Sbjct: 130 HIGHGRNAILGDSLARLLRFCGNSVETHF-----YVDD 162
>gi|242083630|ref|XP_002442240.1| hypothetical protein SORBIDRAFT_08g016780 [Sorghum bicolor]
gi|241942933|gb|EES16078.1| hypothetical protein SORBIDRAFT_08g016780 [Sorghum bicolor]
Length = 644
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 5/22 (22%), Positives = 9/22 (40%), Gaps = 1/22 (4%)
Query: 417 LILLKMKKFSSADYIRKQLESK 438
+ K + AD +R +L
Sbjct: 515 EEARRSKD-AEADRLRDELAKI 535
>gi|116490418|ref|YP_809962.1| glutamyl-tRNA synthetase [Oenococcus oeni PSU-1]
gi|122277393|sp|Q04GX5|SYE_OENOB RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|116091143|gb|ABJ56297.1| glutamyl-tRNA synthetase [Oenococcus oeni PSU-1]
Length = 498
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 50/404 (12%), Positives = 103/404 (25%), Gaps = 65/404 (16%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVT-----YVRNITD----------- 74
PT HIGNAR I L R+Y G+ + RN+ D
Sbjct: 13 PT--GHLHIGNARTAIF-----NWLFARHYNGQFIIRIEDTDLARNVKDGEKSQLDNLQW 65
Query: 75 --ID-----DKIIERARQEHPS-IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
ID DK A ++ A + K + +
Sbjct: 66 LGIDWDEGPDK----ANSKYAPYRQTERAAQGVYQKYIDELLASGKAYKS-----YKTEA 116
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ Q + YE + + ++
Sbjct: 117 TLKEEREAQAQAHQAPHYVYEYAG--MTKEQIKDAQAKDEAAGLKSVVRFRVPENHDYQW 174
Query: 187 NPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K ++ G W G P ++ + + +L ++ + G +
Sbjct: 175 QDLVKGEVKINSKEIGGDWVIQKADGMPTYNF--AVVIDDHLMEITHVLRGDDHVSNTPK 232
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
+ A + + L ++ K + + +E + +
Sbjct: 233 QL---MVYEAFGWKAP---AFGHMALIIKAETGKKLSKRDEDTLQFIEQYREL--GYLPE 284
Query: 306 VIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
+ + + + + FT ++ E + V +
Sbjct: 285 AMFNFIGLLGWSPVGENEIFTREQFKEMFDENRFTKANAKFDAKKLAWVNNQWMRSEKEK 344
Query: 363 SAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEVCKE 399
Q +H+L + ++ + D L A + GI+ E
Sbjct: 345 VMPQLIHELVKAGLINDQQAKNDADHLAKIIEIAGVDGIKATSE 388
>gi|324519960|gb|ADY47526.1| Cysteinyl-tRNA synthetase [Ascaris suum]
Length = 268
Score = 36.6 bits (83), Expect = 8.1, Method: Composition-based stats.
Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 4/36 (11%)
Query: 414 QERLILLKMKK---FSSADYIRKQ-LESKGFILEDY 445
+ R I + K D +R + L G LED
Sbjct: 113 KVRNIAREHKIVGILQECDRLRDEVLPELGVRLEDR 148
>gi|330686226|gb|EGG97838.1| glutamate--tRNA ligase [Staphylococcus epidermidis VCU121]
Length = 484
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 43/356 (12%), Positives = 89/356 (25%), Gaps = 43/356 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPS- 89
PT + HIGNAR L+ L ++Y G+ V I+D +R ++ S
Sbjct: 13 PT--GYLHIGNARTA-----LFNYLFAKHYGGDFVVR-------IEDTDSKRNLEDGESS 58
Query: 90 -----IPINDAISIITSKNTQQ----FVKDTTRLACLAPTHQPRATNHIPQMIYLIQNII 140
+ K+ + L + M
Sbjct: 59 QFDNLKWLGLEWDESVDKDKGYGPYRQSERADIYNPLIKQLLEEDKAYKCYMTEEELEAE 118
Query: 141 LHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWK---RS 197
++ E + + K + K
Sbjct: 119 REAQIARGEMPRY-GGQHAHLTEEQRQQFEAEGRQPSIRFRVPKDKTYTFNDMVKGEISF 177
Query: 198 TPMEPG-WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCAD 256
G W G P ++ + + ++ D+ G + + A
Sbjct: 178 DSNNMGDWVIVKKDGVPTYNF--AVAIDDHYMEISDVIRGDDHVSNTPKQL---MIYEAF 232
Query: 257 RIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHY 316
E + + K + I + +E + + + + + +
Sbjct: 233 GWEAPR----FAHMSLIVNEERKKLSKRDGQILQFIEQYRDL--GYLPEALFNFITLLGW 286
Query: 317 REPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLA 372
+ E I + + S S D L+ + N + + +LA
Sbjct: 287 SPEGE-EEIYSKEEFIKIFDEKRLSKSPAFFDKQKLAWVNNQYMKQKDTETVFELA 341
>gi|319942764|ref|ZP_08017068.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
gi|319803644|gb|EFW00594.1| leucyl-tRNA synthetase [Sutterella wadsworthensis 3_1_45B]
Length = 879
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 13/54 (24%), Positives = 20/54 (37%), Gaps = 3/54 (5%)
Query: 13 RKITEFQAIDP-SNIRMYVCGPTVY--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
R + + + YVC Y H+G+ R + DV+YR R
Sbjct: 25 RAKEDAVDANGHPKPKFYVCSMLPYPSGKLHMGHVRNYTLNDVMYRFHRMKGYN 78
>gi|227548250|ref|ZP_03978299.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
44291]
gi|227079673|gb|EEI17636.1| methionyl-tRNA synthetase [Corynebacterium lipophiloflavum DSM
44291]
Length = 611
Score = 36.6 bits (83), Expect = 8.2, Method: Composition-based stats.
Identities = 22/113 (19%), Positives = 36/113 (31%), Gaps = 22/113 (19%)
Query: 40 HIGNARPM-IVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI------ 92
HIG+ + DV R LR V V TD EH + +
Sbjct: 21 HIGHVAGFGVPSDVFARYLRMTG--HNVLMVSG-TD-----------EHGTPLLVQADKE 66
Query: 93 NDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGH 144
+ + + Q V+D L + NH + L + + +G+
Sbjct: 67 GVTVKELADRYNAQIVEDLAGLGLSYDLFTRTTTRNHYAVVQELFKGLYANGY 119
>gi|270295309|ref|ZP_06201510.1| conserved hypothetical protein [Bacteroides sp. D20]
gi|270274556|gb|EFA20417.1| conserved hypothetical protein [Bacteroides sp. D20]
Length = 680
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|325695442|gb|EGD37342.1| glutamate--tRNA ligase [Streptococcus sanguinis SK150]
Length = 485
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 47/379 (12%), Positives = 101/379 (26%), Gaps = 50/379 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R++ G T++ I D D + E
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTD----RKRHVEDGER 57
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ + + + + N + ++ +
Sbjct: 58 SQLENLRWLGIDWDESPETHENYRQSERLDIYQKYVNELLDKGLAYKSYVTEEELAAERE 117
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMG----------TRVPEKYHKKNPADFI-LWKRSTP 199
+ F DE+ V ++ + + K
Sbjct: 118 RQEAAGETPRYINEFLGMSEDEKAAYIAKREAAGIIPTVRLAVNEAGVYKWTDMVKGDIE 177
Query: 200 MEPG-----WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCC 254
E G W G P ++ + + +L ++ + G + +
Sbjct: 178 FEGGNIGGDWVIQKKDGYPTYNF--AVVIDDHLMEISHVIRGDDHIANTPKQL---MVYE 232
Query: 255 ADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMT 314
A E + L + K + + +E + + + + + +
Sbjct: 233 ALGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALL 287
Query: 315 HYREPIDFTVQRLTEAEILLS-----KWPQTSTSKGIIDPAVLSALYNDLNTVSAIQA-- 367
+ + + E L K P K + D +T+ A+
Sbjct: 288 GWNPGGEHEIFSRQELIELFDEKRLSKSPAAFDQKKLDWMNNEYIKNADFDTIFALAKPY 347
Query: 368 LHKLARESTKNHDLLPIFN 386
L + R + K L+ ++
Sbjct: 348 LEEAGRLTDKAEKLVELYK 366
>gi|325107026|ref|YP_004268094.1| arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
gi|324967294|gb|ADY58072.1| Arginyl-tRNA synthetase [Planctomyces brasiliensis DSM 5305]
Length = 654
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
P V H+G+ R ++ D LYR+L + VT
Sbjct: 124 PNVAKPMHVGHLRSTVIGDALYRILSFLG--HKVT 156
>gi|260173039|ref|ZP_05759451.1| methionyl-tRNA synthetase [Bacteroides sp. D2]
gi|315921317|ref|ZP_07917557.1| conserved hypothetical protein [Bacteroides sp. D2]
gi|313695192|gb|EFS32027.1| conserved hypothetical protein [Bacteroides sp. D2]
Length = 679
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 22/161 (13%), Positives = 40/161 (24%), Gaps = 26/161 (16%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVLFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT--NHIPQMIYLIQNIILHGHAY 146
+ + + K R T H + + G
Sbjct: 70 T------PQDVVDRYHSLIKKSFAEFGIS-FDVYSRTTSPTHHQLASDFFKTLYNKGEFI 122
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
E +E +D + +K
Sbjct: 123 EKTSEQYYDEEAKTFLADRYITGECPHCHSEGAYGDQCEKC 163
>gi|154279182|ref|XP_001540404.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
gi|150412347|gb|EDN07734.1| hypothetical protein HCAG_04244 [Ajellomyces capsulatus NAm1]
Length = 324
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 18/119 (15%), Positives = 28/119 (23%), Gaps = 31/119 (26%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDI------DD---KIIERARQ 85
V H+G+ MI+ DVL R TD D+ KI + A
Sbjct: 69 VNAAPHVGHLYTMILADVLKRWQILLGN----------TDAKLLTGTDEHGLKIQQAAAA 118
Query: 86 EHPSIPIN-----DAISIITSK-------NTQQFVKDTTRLACLAPTHQPRATNHIPQM 132
+ + K + + L + H
Sbjct: 119 LGMTPQALCDQNCKTFQNLARKGNVGYDHFIRTTDAEHKEADMLNHRGYIYTSKHEGWY 177
>gi|309751074|gb|ADO81058.1| Arginyl-tRNA synthetase [Haemophilus influenzae R2866]
Length = 577
Score = 36.6 bits (83), Expect = 8.3, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 39/173 (22%), Gaps = 24/173 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + N+ RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVARTLEFLGH--------NV--------IRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + + + + R + + + +
Sbjct: 163 GTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQSGDE 222
Query: 153 IFDTS-----SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
T I + + + NP + K
Sbjct: 223 YCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQ 275
>gi|326569480|gb|EGE19540.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC8]
Length = 575
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKNLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|315037467|ref|YP_004031035.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
gi|325955925|ref|YP_004286535.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
gi|312275600|gb|ADQ58240.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1112]
gi|325332490|gb|ADZ06398.1| methionyl-tRNA synthetase [Lactobacillus acidophilus 30SC]
gi|327182760|gb|AEA31207.1| methionyl-tRNA synthetase [Lactobacillus amylovorus GRL 1118]
Length = 658
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 35/128 (27%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IGNA I D + R R + +T D+ KI ++A +
Sbjct: 22 IGNAYTTIAADTMARYKRAQGYDTFF-----LTGTDEHGLKIEQKAEAQGIK------PQ 70
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
K + K L H+ + + + ++ G Y +
Sbjct: 71 QFVDKMADSYKKLWKSLDISYDKFIRTTDEQHVKAVQKIFEKLLKKGDIYLGEYTGWYSV 130
Query: 157 SSIPNYGS 164
+
Sbjct: 131 EDEEYFTE 138
>gi|260774016|ref|ZP_05882931.1| hypothetical protein VIB_002495 [Vibrio metschnikovii CIP 69.14]
gi|260610977|gb|EEX36181.1| hypothetical protein VIB_002495 [Vibrio metschnikovii CIP 69.14]
Length = 187
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 17/130 (13%), Positives = 31/130 (23%), Gaps = 12/130 (9%)
Query: 72 ITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQ 131
ITDI+DKII + + ++ + +
Sbjct: 50 ITDINDKII----EAGHEFDLGRVAPDLSFDYNFGSEAILKAWGWEDANDDGKPQQNELT 105
Query: 132 MIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ A+ N+ S S + + + +
Sbjct: 106 DLV--------SAAWTVNSVRYHAVSGGAVTPLSSNITVQINGQEVTLGAEDITEASQLS 157
Query: 192 ILWKRSTPME 201
IL K P E
Sbjct: 158 ILLKSDAPTE 167
>gi|224369775|ref|YP_002603939.1| methionyl-tRNA synthetase [Desulfobacterium autotrophicum HRM2]
gi|223692492|gb|ACN15775.1| MetS [Desulfobacterium autotrophicum HRM2]
Length = 648
Score = 36.6 bits (83), Expect = 8.4, Method: Composition-based stats.
Identities = 30/160 (18%), Positives = 45/160 (28%), Gaps = 25/160 (15%)
Query: 35 VYDFAHIGNARPMIVFDVLYRL----LRYYYGEKCVTYVRNITDID---DKIIERARQEH 87
V H+G+A I DV R R Y +T D DKI+E A +E
Sbjct: 16 VNAKPHLGHAYTTIATDVAARYSRMCARPTYF---------LTGTDEHGDKIVEAATREE 66
Query: 88 PSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAY 146
S + + F RL +HI + L+ I G Y
Sbjct: 67 TS------PKAYVDRISALFKNLWPRLNISNDHFIRTTDPDHIKVVENLLTRIHESGDIY 120
Query: 147 E--ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYH 184
F K + + ++ +
Sbjct: 121 FSEYEGIYCFGCERFYQERELVDGKCPDHGTVPKKIKESN 160
>gi|260584451|ref|ZP_05852198.1| glutamate--tRNA ligase [Granulicatella elegans ATCC 700633]
gi|260157969|gb|EEW93038.1| glutamate--tRNA ligase [Granulicatella elegans ATCC 700633]
Length = 492
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 42/342 (12%), Positives = 83/342 (24%), Gaps = 39/342 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNITDIDDKIIERARQEHPSI 90
PT HIGNAR L+ L R+Y GE + I D D R+ + +
Sbjct: 13 PT--GHLHIGNARTA-----LFNYLFARHYGGEFIIR----IEDTD-------RKRNIAH 54
Query: 91 PINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANN 150
+ +T R + P + LI + Y
Sbjct: 55 GEESQLENLTWLGIDWDEGPDKPKNVGPYRQSEREHIYNPLIEQLIAEDKAYK-CYMTEE 113
Query: 151 EIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWES---- 206
E+ + + G Q ++ + + + P +
Sbjct: 114 ELEAEREAQRANGEMPHYS--GQHAHLTQEQRDAFEAEGRTPVVRFRVPQNRTYTFDDIV 171
Query: 207 PWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFP---------HHENEIAQSCCADR 257
+ + G +D F H +
Sbjct: 172 KGEITFESGSVGGDFVILKRDGMPTYNFAVAVDDHFMEITHVLRGDDHIANTPKQMMVYE 231
Query: 258 IEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTHYR 317
+ L + K + +I + +E K + + + + +
Sbjct: 232 AFGWDTPRFGHMTLIINTETGKKLSKRDESILQFIEQYKDL--GYLPEAMFNFITLLGWS 289
Query: 318 EPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDL 359
+ + E + + + DP L + N
Sbjct: 290 PQGEDEIFSREEFIEIFDEKRLGKSPAA-FDPKKLEWINNTY 330
>gi|145639894|ref|ZP_01795494.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
gi|145270985|gb|EDK10902.1| arginyl-tRNA synthetase [Haemophilus influenzae PittII]
Length = 581
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 18/173 (10%), Positives = 39/173 (22%), Gaps = 24/173 (13%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + N+ RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDAVARTLEFLGH--------NV--------IRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + + + + R + + + +
Sbjct: 163 GTQFGMLIAYLEKMQHEHASEMELQDLEAFYREAKKHYDEDEIFAEKARNYVVKLQSGDE 222
Query: 153 IFDTS-----SIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPM 200
T I + + + NP + K
Sbjct: 223 YCRTMWKRLVDITMQQNQYNYARLNVTLTEKDVMGESLYNPMLPSIVKDLKKQ 275
>gi|20094422|ref|NP_614269.1| lysyl-tRNA synthetase (class I) [Methanopyrus kandleri AV19]
gi|27805740|sp|Q8TWP6|SYK_METKA RecName: Full=Lysyl-tRNA synthetase; AltName: Full=Lysine--tRNA
ligase; Short=LysRS
gi|19887506|gb|AAM02199.1| Lysyl-tRNA synthetase (class I) [Methanopyrus kandleri AV19]
Length = 555
Score = 36.6 bits (83), Expect = 8.5, Method: Composition-based stats.
Identities = 13/30 (43%), Positives = 18/30 (60%), Gaps = 1/30 (3%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYV 69
H+GNAR ++ D + R+LR Y E V V
Sbjct: 42 HVGNARDVLTADAVARVLRERYHE-DVRVV 70
>gi|126728331|ref|ZP_01744147.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
gi|126711296|gb|EBA10346.1| leucyl-tRNA synthetase [Sagittula stellata E-37]
Length = 851
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 8/36 (22%), Positives = 13/36 (36%), Gaps = 2/36 (5%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNI 72
HIG+ R + DV+ R + V +
Sbjct: 45 GRIHIGHVRNYTMGDVIARYKKQNGF--NVLHPMGF 78
>gi|332687559|emb|CBZ41220.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces uvarum]
Length = 895
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R ++ D L R + +
Sbjct: 64 HIGHLRVYVISDSLNRFYKQKGYD 87
>gi|332687555|emb|CBZ41218.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces bayanus]
gi|332687557|emb|CBZ41219.1| mitochondrial leucyl-tRNA synthetase [Saccharomyces bayanus]
Length = 895
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 7/24 (29%), Positives = 12/24 (50%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGE 63
HIG+ R ++ D L R + +
Sbjct: 64 HIGHLRVYVISDSLNRFYKQKGYD 87
>gi|292654629|ref|YP_003534526.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
gi|291372251|gb|ADE04478.1| leucyl-tRNA synthetase [Haloferax volcanii DS2]
Length = 958
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 13/34 (38%), Positives = 15/34 (44%), Gaps = 5/34 (14%)
Query: 33 PTV-YDFA----HIGNARPMIVFDVLYRLLRYYY 61
TV Y + HIG+AR V DV R R
Sbjct: 36 VTVPYPYPSGGMHIGHARTYTVPDVYARYRRQQG 69
>gi|218131529|ref|ZP_03460333.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
gi|217986461|gb|EEC52798.1| hypothetical protein BACEGG_03148 [Bacteroides eggerthii DSM 20697]
Length = 680
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVVFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|83589432|ref|YP_429441.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
gi|123725764|sp|Q2RKZ1|SYL_MOOTA RecName: Full=Leucyl-tRNA synthetase; AltName: Full=Leucine--tRNA
ligase; Short=LeuRS
gi|83572346|gb|ABC18898.1| leucyl-tRNA synthetase [Moorella thermoacetica ATCC 39073]
Length = 829
Score = 36.6 bits (83), Expect = 8.6, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 44/159 (27%), Gaps = 18/159 (11%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERAR---QEHPSIPINDAI 96
H+G+ R + DV+ R+ R V + D A E+ +I
Sbjct: 49 HMGHVRNYSIGDVVARVKRMRGY--NVLHPMG---WD------AFGLPAENAAIHRGIPP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPTHQPRATNH---IPQMIYLIQNIILHGHAYEANNEI- 152
+ T N + + + AT H +L + HG AY +
Sbjct: 98 AEWTWSNIANMRRQLHAMGISYDWDREVATCHPNYYRWTQWLFLQMYKHGLAYRKKAAVN 157
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
+ + E+ + + +
Sbjct: 158 WCPSCATVLANEQVVDGACERCHTPVMRKDLEQWFFRIT 196
>gi|167763880|ref|ZP_02436007.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
43183]
gi|167697996|gb|EDS14575.1| hypothetical protein BACSTE_02261 [Bacteroides stercoris ATCC
43183]
Length = 680
Score = 36.6 bits (83), Expect = 8.7, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVVFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|159905738|ref|YP_001549400.1| lysyl-tRNA synthetase [Methanococcus maripaludis C6]
gi|159887231|gb|ABX02168.1| lysyl-tRNA synthetase [Methanococcus maripaludis C6]
Length = 533
Score = 36.6 bits (83), Expect = 8.7, Method: Composition-based stats.
Identities = 49/358 (13%), Positives = 97/358 (27%), Gaps = 44/358 (12%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KI---IERA 83
G T HIGNAR + D +Y+ + + + +V DD K+ + R
Sbjct: 25 GITPSGHIHIGNARETLTADAVYKGIAKKGAKAKLIFV-----ADDYDPLRKLYPFLPRE 79
Query: 84 RQEHPSIPINDAI------SIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQ 137
+++ +P+++ F+ L TH+ +I
Sbjct: 80 FEKYIGMPLSEIPCPQGCCKSYADHFLMPFLNSLEDLGVDITTHRANECYKAGMYNDVII 139
Query: 138 NIILHGHAYEANNEII-----FDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ + + + D N K+ E K+ E
Sbjct: 140 TALENRLKIKEILDSYRKEPLADDWFPLNVVCEKCGKMHETKVTVYNSEDKTITYVCKCG 199
Query: 193 LWKRSTPMEPGWESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQS 252
P + PW P G + G ++ I +
Sbjct: 200 FENTVQPFNGIGKLPWRVDWPSR--------WSIFGVTAEPMGKDHAASGGSYDTGIKIA 251
Query: 253 CCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAML 312
+ + L + + M S+ + ++ K ++R +L
Sbjct: 252 RQIYGYQAPEKMVYEWIQLKIGDKAMPMSSSSG-----VVFAVKDWNEICHPEILRFLIL 306
Query: 313 MTHYREPIDFT-------VQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVS 363
+ IDF V E E + + ++ + D +L T
Sbjct: 307 KGKPTKHIDFDLKAISNLVDDYDELERKYFELIEKQKTEELNDNESEKISLYNLVTPK 364
>gi|319946150|ref|ZP_08020393.1| glutamate--tRNA ligase [Streptococcus australis ATCC 700641]
gi|319747679|gb|EFV99929.1| glutamate--tRNA ligase [Streptococcus australis ATCC 700641]
Length = 486
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 103/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPETHENYRQSERLELYQTYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + + E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYVAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLTTIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|309799135|ref|ZP_07693386.1| glutamyl-tRNA synthetase [Streptococcus infantis SK1302]
gi|308117224|gb|EFO54649.1| glutamyl-tRNA synthetase [Streptococcus infantis SK1302]
Length = 486
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 104/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + N + L + + +
Sbjct: 60 LENL-RWLGMDWDESPETNKNYRQSERLELYQRYIDQLLAEGKAYKSYVTEEELAVERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + + E++ +P N + W +
Sbjct: 119 QEAAGETPCYINEYLGMSEEEKAAYVAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + N+ + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNEYIKRADLTTIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|259907081|ref|YP_002647437.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
gi|224962703|emb|CAX54158.1| Putative Methionine-tRNA ligase [Erwinia pyrifoliae Ep1/96]
gi|283476882|emb|CAY72733.1| metG [Erwinia pyrifoliae DSM 12163]
Length = 658
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 8/30 (26%), Positives = 12/30 (40%), Gaps = 1/30 (3%)
Query: 33 PTVYDFAHIGNAR-PMIVFDVLYRLLRYYY 61
PT H+G+ P + D+ R L
Sbjct: 123 PTPNGDLHLGHLSGPYLGADIYRRYLTLKG 152
>gi|332198490|gb|EGJ12573.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA41317]
Length = 486
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGTIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|33303703|gb|AAP22259.1| methionyl-tRNA synthetase [Bacillus cereus]
Length = 410
Score = 36.6 bits (83), Expect = 8.8, Method: Composition-based stats.
Identities = 19/128 (14%), Positives = 37/128 (28%), Gaps = 15/128 (11%)
Query: 41 IGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAIS 97
IG+A + D + R R V Y +T D+ KI ++A + +N
Sbjct: 1 IGHAYTTVAGDAMARYKRMQGY--NVHY---LTGTDEHGQKIQKKAEE------LNVTPQ 49
Query: 98 IITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIFDT 156
+ ++ H + + + ++ G Y E +
Sbjct: 50 AYVDNIVAGIKELWEKMDISYDDFIRTTEDRHKDVVEKIFKQLVDQGDIYLDEYEGWYSV 109
Query: 157 SSIPNYGS 164
Y
Sbjct: 110 QDETFYTE 117
>gi|322801003|gb|EFZ21784.1| hypothetical protein SINV_04670 [Solenopsis invicta]
Length = 612
Score = 36.6 bits (83), Expect = 8.9, Method: Composition-based stats.
Identities = 19/157 (12%), Positives = 42/157 (26%), Gaps = 11/157 (7%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIG+ ++ D + R + T T D+ KI A P +
Sbjct: 81 PHIGHLYSAVLADAVARYNNMLGHKIFFT-----TGTDEHGNKIKTAAAAAGL--PNLEY 133
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEIIFD 155
+ I+ + + + + T + R + + L N+ L ++ + +
Sbjct: 134 CTQISQQFKEMCDRFEVDYSRFIRTTEKRHCDAVYHFWVLRTNLFLTSTSFAIS-CVTHK 192
Query: 156 TSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ + D
Sbjct: 193 RLEEKGHIYLGKYSGWYCVSDEAFLSDADLIEQKDST 229
>gi|317474804|ref|ZP_07934078.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
gi|316909485|gb|EFV31165.1| tRNA synthetase class I [Bacteroides eggerthii 1_2_48FAA]
Length = 680
Score = 36.6 bits (83), Expect = 8.9, Method: Composition-based stats.
Identities = 18/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVVFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + + + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKQSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|160891633|ref|ZP_02072636.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
gi|156859040|gb|EDO52471.1| hypothetical protein BACUNI_04086 [Bacteroides uniformis ATCC 8492]
Length = 702
Score = 36.6 bits (83), Expect = 8.9, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 41 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVIFIGGSDEHGVPIT-------IRAKKEGI 91
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 92 T------PQDVVDRYHTLIKKSFEEFGVSFDVYSRTTSKTHHDTASDFFRKLYDKGEFIE 145
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 146 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 185
>gi|322375971|ref|ZP_08050481.1| glutamate--tRNA ligase [Streptococcus sp. C300]
gi|321278921|gb|EFX55964.1| glutamate--tRNA ligase [Streptococcus sp. C300]
Length = 486
Score = 36.6 bits (83), Expect = 9.0, Method: Composition-based stats.
Identities = 43/358 (12%), Positives = 99/358 (27%), Gaps = 42/358 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G T++ I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGG----TFIIRIEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGIDWDESPETHANYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKATYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR 373
+ + + E L + + + D L + ND + + + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKRADLATIFEMAK 345
>gi|159475080|ref|XP_001695651.1| hypothetical protein CHLREDRAFT_119290 [Chlamydomonas reinhardtii]
gi|158275662|gb|EDP01438.1| predicted protein [Chlamydomonas reinhardtii]
Length = 589
Score = 36.6 bits (83), Expect = 9.0, Method: Composition-based stats.
Identities = 11/38 (28%), Positives = 18/38 (47%), Gaps = 1/38 (2%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
P V H+G+ R I+ D L R+ Y + + +V
Sbjct: 137 PNVAKEMHVGHLRSTIIGDTLCRVFEYCGSDVLRLNHV 174
>gi|32266208|ref|NP_860240.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
gi|81666101|sp|Q7VI99|SYR_HELHP RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|32262258|gb|AAP77306.1| arginyl-tRNA synthetase [Helicobacter hepaticus ATCC 51449]
Length = 548
Score = 36.6 bits (83), Expect = 9.0, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 2/39 (5%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
PT HIG+AR + D L R+ R+ + Y N
Sbjct: 133 PT--GPLHIGHARGAVYGDALTRVGRFLGYDILTEYYIN 169
>gi|326561584|gb|EGE11925.1| arginyl-tRNA synthetase [Moraxella catarrhalis 46P47B1]
Length = 567
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 114 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 154
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 155 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 214
Query: 153 IF 154
Sbjct: 215 YC 216
>gi|320165286|gb|EFW42185.1| rars protein [Capsaspora owczarzaki ATCC 30864]
Length = 742
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 1/32 (3%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE-KCVTYV 69
H+G+ R I+ + L RLL Y E V +V
Sbjct: 288 MHVGHLRSTIIGESLCRLLEYRGFEVLRVNHV 319
>gi|255070991|ref|XP_002507577.1| predicted protein [Micromonas sp. RCC299]
gi|226522852|gb|ACO68835.1| predicted protein [Micromonas sp. RCC299]
Length = 509
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 27/130 (20%), Positives = 45/130 (34%), Gaps = 9/130 (6%)
Query: 35 VYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPIND 94
V D HIG+ V DV RL R K V ++ TD + E +
Sbjct: 8 VNDKPHIGHVYTSTVADVYARLQRNMG--KDVFFLTG-TD-----EHGLKVEQSAEKRGI 59
Query: 95 AISIITSKNTQQFVKDTTRLACLAPTHQPRA-TNHIPQMIYLIQNIILHGHAYEANNEII 153
+ +N+ F + + + T+H Q+ L++ ++ G Y E
Sbjct: 60 GTQQLADENSALFREVMDDMNISYTSFIRTTDTSHQVQVQRLVEILLQKGFIYLGKFEGW 119
Query: 154 FDTSSIPNYG 163
+D Y
Sbjct: 120 YDEGQEEYYT 129
>gi|169335812|ref|ZP_02863005.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
17244]
gi|169258550|gb|EDS72516.1| hypothetical protein ANASTE_02238 [Anaerofustis stercorihominis DSM
17244]
Length = 651
Score = 36.6 bits (83), Expect = 9.1, Method: Composition-based stats.
Identities = 22/177 (12%), Positives = 51/177 (28%), Gaps = 19/177 (10%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDA 95
HIGN +++ D + R R + V + T D+ KI +A + +
Sbjct: 19 PHIGNTYEIVLADSIARYKRLTGYD--VYFQ---TGTDEHGQKIETKANEAGIT------ 67
Query: 96 ISIITSKNTQQFVKDTTRLACLAPTHQPRAT-NHIPQMIYLIQNIILHGHAYEANNEIIF 154
+++ + + H ++ + + + G Y+ E ++
Sbjct: 68 PQKFVDNVSEEIHRIWDIMNTSYDKFVRTTDPYHEKKVQQIFKKLYEQGDIYKDEYEGMY 127
Query: 155 DTSSIPNYGS----FSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPGWESP 207
+ + +++ E Y K P + P
Sbjct: 128 CEPCESFFTESQLIDGKCPDCGREVSYEKEEAYFFKLSKYADRLMEYIETHPEFIQP 184
>gi|290889826|ref|ZP_06552913.1| hypothetical protein AWRIB429_0303 [Oenococcus oeni AWRIB429]
gi|290480436|gb|EFD89073.1| hypothetical protein AWRIB429_0303 [Oenococcus oeni AWRIB429]
Length = 498
Score = 36.6 bits (83), Expect = 9.2, Method: Composition-based stats.
Identities = 50/404 (12%), Positives = 103/404 (25%), Gaps = 65/404 (16%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVT-----YVRNITD----------- 74
PT HIGNAR I L R+Y G+ + RN+ D
Sbjct: 13 PT--GHLHIGNARTAIF-----NWLFARHYNGQFIIRIEDTDLARNVKDGEKSQLDNLQW 65
Query: 75 --ID-----DKIIERARQEHPS-IPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRAT 126
ID DK A ++ A + K + +
Sbjct: 66 LGIDWDEGPDK----ANSKYAPYRQTERAAQGVYQKYIDELLASGKAYKS-----YKTEA 116
Query: 127 NHIPQMIYLIQNIILHGHAYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKK 186
+ Q + YE + + ++
Sbjct: 117 TLKEEREAQAQAHQAPHYVYEYAG--MTKEQIKDAQAKDEAVGLKSVVRFRVPENHDYQW 174
Query: 187 NPADFILWKRSTPMEPG-WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHH 245
K ++ G W G P ++ + + +L ++ + G +
Sbjct: 175 QDLVKGEVKINSKEIGGDWVIQKADGMPTYNF--AVVIDDHLMEITHVLRGDDHVSNTPK 232
Query: 246 ENEIAQSCCADRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAP 305
+ A + + L ++ K + + +E + +
Sbjct: 233 QL---MVYEAFGWKAP---AFGHMALIIKAETGKKLSKRDEDTLQFIEQYREL--GYLPE 284
Query: 306 VIRLAMLMTHYREPID---FTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTV 362
+ + + + + FT ++ E + V +
Sbjct: 285 AMFNFIGLLGWSPVGENEIFTREQFKEMFDENRFTKANAKFDAKKLAWVNNQWMRSEKEK 344
Query: 363 SAIQALHKLAR-------ESTKNHDLLPIFNASAHILGIEVCKE 399
Q +H+L + ++ + D L A + GI+ E
Sbjct: 345 VMPQLIHELVKAGLINDQQAKNDADHLAKIIEIAGVDGIKATSE 388
>gi|84489000|ref|YP_447232.1| leucyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|84372319|gb|ABC56589.1| LeuS [Methanosphaera stadtmanae DSM 3091]
Length = 953
Score = 36.6 bits (83), Expect = 9.2, Method: Composition-based stats.
Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 8/51 (15%)
Query: 18 FQAIDPSNIRMYVCGPTV---Y--DFAHIGNARPMIVFDVLYRLLRYYYGE 63
F++ + +MYV TV Y H+G+ R V DV R R
Sbjct: 19 FESNPDNREKMYV---TVAFPYPSGAMHVGHGRTYTVPDVYARFKRMQGFN 66
>gi|329956546|ref|ZP_08297143.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
gi|328524443|gb|EGF51513.1| methionine--tRNA ligase [Bacteroides clarus YIT 12056]
Length = 680
Score = 36.6 bits (83), Expect = 9.3, Method: Composition-based stats.
Identities = 19/160 (11%), Positives = 39/160 (24%), Gaps = 24/160 (15%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRN-------ITDIDDKIIERARQEHP 88
HIG+ + D+ R LR ++ V ++ IT RA++E
Sbjct: 19 GPVHIGHLAGVYVPADIYVRYLRLK--KEDVVFIGGSDEHGVPIT-------IRAKKEGI 69
Query: 89 SIPINDAISIITSKNTQQFVKDTTRLACL-APTHQPRATNHIPQMIYLIQNIILHGHAYE 147
+ + + K + + H + + G E
Sbjct: 70 T------PQDVVDRYHTLIKKSFEEFGISFDVYSRTTSKTHHDTASEFFRKLYDKGEFIE 123
Query: 148 ANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKN 187
+ +D + +K
Sbjct: 124 KTSMQYYDEEAKTFLADRYITGECPHCHAEGAYGDQCEKC 163
>gi|326577009|gb|EGE26904.1| arginyl-tRNA synthetase [Moraxella catarrhalis 101P30B1]
gi|326577465|gb|EGE27349.1| arginyl-tRNA synthetase [Moraxella catarrhalis O35E]
Length = 575
Score = 36.6 bits (83), Expect = 9.3, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|312080189|ref|XP_003142494.1| hypothetical protein LOAG_06912 [Loa loa]
gi|307762342|gb|EFO21576.1| hypothetical protein LOAG_06912 [Loa loa]
Length = 877
Score = 36.6 bits (83), Expect = 9.3, Method: Composition-based stats.
Identities = 12/51 (23%), Positives = 17/51 (33%), Gaps = 7/51 (13%)
Query: 20 AIDPSN--IRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTY 68
P + MY P H+G+ R + D L R Y V +
Sbjct: 64 PSRPKKYILSMY---PYPSGRLHMGHMRVYTISDALARY--YKLNGYNVIH 109
>gi|326574023|gb|EGE23972.1| arginyl-tRNA synthetase [Moraxella catarrhalis CO72]
Length = 575
Score = 36.6 bits (83), Expect = 9.4, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|326572757|gb|EGE22743.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC7]
Length = 575
Score = 36.6 bits (83), Expect = 9.4, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|296112948|ref|YP_003626886.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
gi|295920642|gb|ADG60993.1| arginyl-tRNA synthetase [Moraxella catarrhalis RH4]
Length = 575
Score = 36.6 bits (83), Expect = 9.4, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|319405600|emb|CBI79223.1| Arginyl-tRNA synthetase [Bartonella sp. AR 15-3]
Length = 588
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 19/74 (25%), Positives = 30/74 (40%), Gaps = 12/74 (16%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD-----KIIERARQEH 87
PT H+G+ R ++ DVL LL++ E Y N D K++ R+
Sbjct: 136 PT--GPMHVGHCRGAVIGDVLANLLQFTGYEVTKEYYIN-----DAGEQIKVLARSVMLR 188
Query: 88 PSIPINDAISIITS 101
+ + IS I
Sbjct: 189 YREALGEKISEIPE 202
>gi|18314006|ref|NP_560673.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
gi|23822198|sp|Q8ZTA8|SYR_PYRAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|18161582|gb|AAL64855.1| arginyl-tRNA synthetase [Pyrobaculum aerophilum str. IM2]
Length = 630
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 5/38 (13%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
HIG+ R I+ D L RLL++ + + +DD
Sbjct: 127 HIGHGRNAILGDSLARLLKFCGNKVETHF-----YVDD 159
>gi|114319978|ref|YP_741661.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
gi|122312171|sp|Q0AAG6|SYM_ALHEH RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|114226372|gb|ABI56171.1| methionyl-tRNA synthetase [Alkalilimnicola ehrlichii MLHE-1]
Length = 675
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 19/166 (11%), Positives = 37/166 (22%), Gaps = 19/166 (11%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD----KIIERARQEHPSIPI 92
H+G+ I D+ R R + YV DD I+ +AR+ +
Sbjct: 16 GPIHLGHLVEYIQTDIWARFQRLRGHDCH--YVC----ADDAHGTPIMLKARERGITPEA 69
Query: 93 ------NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAY 146
+ + D + + + AY
Sbjct: 70 LIAEVGEEHQRDFADFLIEF---DNYHTTHSDENRYFAELIYSRLNQAGHIDRKVIKQAY 126
Query: 147 EANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFI 192
+ E+ I + Y + +
Sbjct: 127 DPKLEMFLPDRYIKGECPRCGAEDQYGDSCEACGATYTPAELKNAV 172
>gi|326567939|gb|EGE18036.1| arginyl-tRNA synthetase [Moraxella catarrhalis BC1]
Length = 575
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|326561173|gb|EGE11538.1| arginyl-tRNA synthetase [Moraxella catarrhalis 7169]
Length = 575
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 16/122 (13%), Positives = 29/122 (23%), Gaps = 19/122 (15%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDDKIIERARQEHPSIPI 92
P V H+G+ R I+ D + R L + + RA
Sbjct: 122 PNVAKEMHVGHLRSTIIGDSVVRTLEFLGN----------------TVIRANHVG---DW 162
Query: 93 NDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
++ + + D L RA H + + +
Sbjct: 163 GTQFGMLIAYLEKVQNDDVKDLDLSDLEAFYRAAKHAYDSDEAFAKKSRNYVVKLQSGDE 222
Query: 153 IF 154
Sbjct: 223 YC 224
>gi|315645723|ref|ZP_07898847.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
gi|315279201|gb|EFU42511.1| hypothetical protein PVOR_09605 [Paenibacillus vortex V453]
Length = 285
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 14/40 (35%), Positives = 18/40 (45%), Gaps = 5/40 (12%)
Query: 38 FAHIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD 77
AHIG+ R + D L RL+R + N IDD
Sbjct: 128 SAHIGHLRNSCIGDTLVRLMRKLGYKVE---AHNY--IDD 162
>gi|149011925|ref|ZP_01833073.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
gi|147763880|gb|EDK70813.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP19-BS75]
Length = 486
Score = 36.6 bits (83), Expect = 9.5, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEAAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|159042514|ref|YP_001541766.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
gi|157921349|gb|ABW02776.1| leucyl-tRNA synthetase [Caldivirga maquilingensis IC-167]
Length = 983
Score = 36.6 bits (83), Expect = 9.6, Method: Composition-based stats.
Identities = 8/27 (29%), Positives = 11/27 (40%)
Query: 37 DFAHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R V DV+ R R
Sbjct: 37 GPPHMGHGRTFTVGDVVARFKRMMGYN 63
>gi|84488913|ref|YP_447145.1| methionyl-tRNA synthetase [Methanosphaera stadtmanae DSM 3091]
gi|121725522|sp|Q2NI31|SYM_METST RecName: Full=Methionyl-tRNA synthetase; AltName:
Full=Methionine--tRNA ligase; Short=MetRS
gi|84372232|gb|ABC56502.1| MetG [Methanosphaera stadtmanae DSM 3091]
Length = 676
Score = 36.6 bits (83), Expect = 9.6, Method: Composition-based stats.
Identities = 23/159 (14%), Positives = 39/159 (24%), Gaps = 14/159 (8%)
Query: 37 DFAHIGNAR-PMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD--KIIERARQEHPSIPIN 93
H+G+ R I D+ R R + T + TD + I RA QE
Sbjct: 15 GPCHLGHLRSTYIPADIYARYNRMTGVD---TLMVCSTD-EHGTPIAVRAEQEK------ 64
Query: 94 DAISIITSKNTQQFVKDTTRLAC-LAPTHQPRATNHIPQMIYLIQNIILHGHAYEANNEI 152
IT + D L + H ++ G+ YE +
Sbjct: 65 KNPKDITDIYHEIIGNDLKSCNISLDSFRRTTDEIHYKMAQDFFLDLYNKGYIYEKVIDQ 124
Query: 153 IFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF 191
++ + +
Sbjct: 125 LYCDECKRSLPDRYVEGTCPYCESEGARGDQCEVCGRHL 163
>gi|15606252|ref|NP_213630.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
gi|6226192|sp|O67068|SYR_AQUAE RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|2983452|gb|AAC07033.1| arginyl-tRNA synthetase [Aquifex aeolicus VF5]
Length = 583
Score = 36.6 bits (83), Expect = 9.6, Method: Composition-based stats.
Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 4/35 (11%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLLRYYYGEKCVT 67
PT H+G+ R +V D L RL + + VT
Sbjct: 123 PT--GPLHLGHGRGAVVGDTLARLFK--FFNYDVT 153
>gi|296109085|ref|YP_003616034.1| lysyl-tRNA synthetase [Methanocaldococcus infernus ME]
gi|295433899|gb|ADG13070.1| lysyl-tRNA synthetase [Methanocaldococcus infernus ME]
Length = 521
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 2/39 (5%)
Query: 32 GPTVYDFAHIGNARPMIVFDVLYR-LLRYYYGEKCVTYV 69
G T HIGNAR + D +Y+ L+ GE + ++
Sbjct: 20 GITPSGHIHIGNARETLTADAIYKAYLK-RGGEGELIFI 57
>gi|194397703|ref|YP_002038659.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae G54]
gi|238690806|sp|B5E378|SYE_STRP4 RecName: Full=Glutamyl-tRNA synthetase; AltName:
Full=Glutamate--tRNA ligase; Short=GluRS
gi|194357370|gb|ACF55818.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae G54]
Length = 486
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|168489130|ref|ZP_02713329.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|168494176|ref|ZP_02718319.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|221232783|ref|YP_002511937.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225855558|ref|YP_002737070.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|183572277|gb|EDT92805.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae SP195]
gi|183575969|gb|EDT96497.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae CDC3059-06]
gi|220675245|emb|CAR69835.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae ATCC 700669]
gi|225722242|gb|ACO18095.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae JJA]
gi|332071339|gb|EGI81833.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA41301]
gi|332071504|gb|EGI81997.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA17570]
gi|332198675|gb|EGJ12757.1| glutamyl-tRNA synthetase [Streptococcus pneumoniae GA47368]
Length = 486
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 44/377 (11%), Positives = 102/377 (27%), Gaps = 46/377 (12%)
Query: 33 PTVYDFAHIGNARPMIVFDVLYRLL--RYYYGEKCVTYVRNI--TD----IDDKIIERAR 84
PT HIGNAR L+ L R++ G + I TD ++D ER++
Sbjct: 13 PT--GLLHIGNARTA-----LFNYLYARHHGGTFLIR----IEDTDRKRHVED--GERSQ 59
Query: 85 QEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPRATNHIPQMIYLIQNIILHGH 144
E+ + + + L + +
Sbjct: 60 LENL-RWLGMDWDESPESHENYRQSERLDLYQKYIDQLLAEGKAYKSYVTEEELAAERER 118
Query: 145 AYEANNEIIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADFILWKRSTPMEPG- 203
A + + I E++ +P N + W +
Sbjct: 119 QEVAGETPRYINEYLGMSEEEKAAYIAEREAAGIIPTVRLAVNESGIYKWHDMVKGDIEF 178
Query: 204 --------WESPWGRGRPGWHIECSAMSSHYLGKVFDIHGGGLDLIFPHHENEIAQSCCA 255
W G P ++ + + + ++ + G + + A
Sbjct: 179 EGGNIGGDWVIQKKDGYPTYNF--AVVIDDHDMQISHVIRGDDHIANTPKQL---MVYEA 233
Query: 256 DRIEKTANIWIHNGFLNLEGRKMSKSNGNFITINELLETKKFGGRSWPAPVIRLAMLMTH 315
E + L + K + + +E + + + + + +
Sbjct: 234 LGWEAPE---FGHMTLIINSETGKKLSKRDTNTLQFIE--DYRKKGYLPEAVFNFIALLG 288
Query: 316 YREPIDFTVQRLTEAEILLSKWPQTSTSKGIIDPAVLSALYNDLNTVSAIQALHKLAR-- 373
+ + + E L + + + D L + ND + ++ + ++A+
Sbjct: 289 WNPGGEDEIFSREELIKLFDENRLSKSPAA-FDQKKLDWMSNDYIKNADLETIFEMAKPF 347
Query: 374 --ESTKNHDLLPIFNAS 388
E+ + D
Sbjct: 348 LEEAGRLTDKAEKLVEL 364
>gi|88604070|ref|YP_504248.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
gi|109895001|sp|Q2FS66|SYR_METHJ RecName: Full=Arginyl-tRNA synthetase; AltName: Full=Arginine--tRNA
ligase; Short=ArgRS
gi|88189532|gb|ABD42529.1| arginyl-tRNA synthetase [Methanospirillum hungatei JF-1]
Length = 555
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 11/32 (34%), Positives = 14/32 (43%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRN 71
H+G+ R I+ D L R R V Y N
Sbjct: 124 HVGHIRNTIIGDTLARCFRKAGYPLEVQYYVN 155
>gi|84996665|ref|XP_953054.1| arginyl-tRNA synthetase [Theileria annulata strain Ankara]
gi|65304050|emb|CAI76429.1| arginyl-tRNA synthetase, putative [Theileria annulata]
Length = 632
Score = 36.6 bits (83), Expect = 9.7, Method: Composition-based stats.
Identities = 7/25 (28%), Positives = 15/25 (60%)
Query: 39 AHIGNARPMIVFDVLYRLLRYYYGE 63
H+G+ R ++ D L R+L ++ +
Sbjct: 156 MHVGHLRSTVIGDSLARVLEFFGYK 180
>gi|254302086|ref|ZP_04969444.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
gi|148322278|gb|EDK87528.1| leucine--tRNA ligase [Fusobacterium nucleatum subsp. polymorphum
ATCC 10953]
Length = 859
Score = 36.6 bits (83), Expect = 9.9, Method: Composition-based stats.
Identities = 23/188 (12%), Positives = 47/188 (25%), Gaps = 23/188 (12%)
Query: 40 HIGNARPMIVFDVLYRLLRYYYGEKCVTYVRNITDIDD---KIIERARQEHPSIPINDAI 96
H+G+AR + DV+ R R V D A Q
Sbjct: 49 HVGHARNYTIGDVISRYKRMKGY--NVLQPMG---WDSFGLPAENAAIQNGT------HP 97
Query: 97 SIITSKNTQQFVKDTTRLACLAPT---HQPRATNHIPQMIYLIQNIILHGHAYEANN--E 151
+I T N + + + + +L + + G Y+ +
Sbjct: 98 AIWTKSNIENMRRQLKLMGFSYDWEREIASYTPEYYKWNQWLFKRMYEKGLIYKKKSLVN 157
Query: 152 IIFDTSSIPNYGSFSRRKIDEQKMGTRVPEKYHKKNPADF----ILWKRSTPMEPGWESP 207
D ++ + ++ + L + ++ GW
Sbjct: 158 WCPDCQTVLANEQVEDGMCWRHSKTHVIQKELEQWFFKITDYADELLEGHEEIKDGWPEK 217
Query: 208 WGRGRPGW 215
+ W
Sbjct: 218 VLTMQKNW 225
Database: nr
Posted date: May 22, 2011 12:22 AM
Number of letters in database: 999,999,966
Number of sequences in database: 2,987,313
Database: /data/usr2/db/fasta/nr.01
Posted date: May 22, 2011 12:30 AM
Number of letters in database: 999,999,796
Number of sequences in database: 2,903,041
Database: /data/usr2/db/fasta/nr.02
Posted date: May 22, 2011 12:36 AM
Number of letters in database: 999,999,281
Number of sequences in database: 2,904,016
Database: /data/usr2/db/fasta/nr.03
Posted date: May 22, 2011 12:41 AM
Number of letters in database: 999,999,960
Number of sequences in database: 2,935,328
Database: /data/usr2/db/fasta/nr.04
Posted date: May 22, 2011 12:46 AM
Number of letters in database: 842,794,627
Number of sequences in database: 2,394,679
Lambda K H
0.315 0.132 0.439
Lambda K H
0.267 0.0403 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,838,362,259
Number of Sequences: 14124377
Number of extensions: 255092071
Number of successful extensions: 661976
Number of sequences better than 10.0: 6453
Number of HSP's better than 10.0 without gapping: 4403
Number of HSP's successfully gapped in prelim test: 2050
Number of HSP's that attempted gapping in prelim test: 635792
Number of HSP's gapped (non-prelim): 10597
length of query: 461
length of database: 4,842,793,630
effective HSP length: 143
effective length of query: 318
effective length of database: 2,823,007,719
effective search space: 897716454642
effective search space used: 897716454642
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.5 bits)
S2: 83 (36.6 bits)