RPSBLAST alignment for GI: 254780573 and conserved domain: cd00672
>gnl|CDD|173899 cd00672, CysRS_core, catalytic core domain of cysteinyl tRNA synthetase. Cysteinyl tRNA synthetase (CysRS) catalytic core domain. This class I enzyme is a monomer which aminoacylates the 2'-OH of the nucleotide at the 3' of the appropriate tRNA. The core domain is based on the Rossman fold and is responsible for the ATP-dependent formation of the enzyme bound aminoacyl-adenylate. It contains the characteristic class I HIGH and KMSKS motifs, which are involved in ATP binding. Length = 213
Score = 151 bits (385), Expect = 3e-37
Identities = 59/125 (47%), Positives = 77/125 (61%), Gaps = 11/125 (8%)
Query: 6 KIYNTLERKITEFQAIDPSNIRMYVCGPTVYDFAHIGNARPMIVFDVLYRLLRYY-YGEK 64
++YNTL R+ EF ++P + MYVCGPTVYD+AHIG+AR +VFDVL R L Y
Sbjct: 1 RLYNTLTRQKEEFVPLNPGLVTMYVCGPTVYDYAHIGHARTYVVFDVLRRYLEDLGYK-- 58
Query: 65 CVTYVRNITDIDDKIIERARQEHPSIPINDAISIITSKNTQQFVKDTTRLACLAPTHQPR 124
V YV+NITDIDDKII+RAR+E + + + T++F +D L L P PR
Sbjct: 59 -VRYVQNITDIDDKIIKRAREEG--LSWKE----VADYYTKEFFEDMKALNVLPPDVVPR 111
Query: 125 ATNHI 129
HI
Sbjct: 112 VW-HI 115